LOCUS       DANLTI010000001        63794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.001, whole genome shotgun sequence.
ACCESSION   DANLTI010000001 DANLTI010000000
VERSION     DANLTI010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 63794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.001"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            182..1219
                     /gene="rsgA"
                     /locus_tag="PXB09_000001"
     CDS             182..1219
                     /gene="rsgA"
                     /locus_tag="PXB09_000001"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDL5232170.1"
                     /translation="MSKPKLTHNQQRRIQSNHHKRINKKEIEWQDEMLGEMQQGIVVT
                     RHVKHADVETAEGQIFRCNIRRTLKNVVVGDQVSWRKGSEQLQGISGVIEAVFPRKNE
                     LTRPDYYDGIKVMASNIDQIIIVSAVLPTLSLNIIDRYLVICETANIPALIVLNKIDL
                     LNESERQAVKEQLKIYEEIGYETLCLSADTGENMQALHQYLAKGTSIFVGQSGVGKSS
                     LINQLLPEVNALTGSVSDNSGLGQHTTTASRLYHLPQGGQLIDSPGIREFGLWHLEPE
                     QITLGYREFQSVLGTCKFRDCKHKTDPGCALRQEVENGEISAIRFENYHRLIESLSET
                     KSQRHFRKEEV"
     gene            1216..1815
                     /gene="rnhB"
                     /locus_tag="PXB09_000002"
     CDS             1216..1815
                     /gene="rnhB"
                     /locus_tag="PXB09_000002"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDL5232171.1"
                     /translation="MMNEFIYPNARLIAGVDEVGRGPLVGAVVTAAVILDPNNPIQGL
                     TDSKKLSEKKRQALAEEIKAKALSWSLGRAEPTEIDELNILNATMLAMQRAVAGLHIQ
                     PDFVLIDGNRPPKLPMPAQAVVKGDSLVAEISAASIIAKVARDQEMDELDQQFPQYGF
                     AQHKGYPTKLHFEKLAEFGATPYHRKSFAPVRKVLGLID"
     gene            1828..2187
                     /locus_tag="PXB09_000003"
     CDS             1828..2187
                     /locus_tag="PXB09_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDL5232172.1"
                     /translation="MTTEYQKTIFTKIINKEIPANIVYQDELVTAFRDIAPQAPTHIL
                     IIPNKFIPTVNHVSNEDELALGRLFTVAAKLAQEEGIAEEGYRLVMNCNKNGGQEVFH
                     IHMHLLGGQKLGPLVAK"
     gene            2190..2561
                     /locus_tag="PXB09_000004"
     CDS             2190..2561
                     /locus_tag="PXB09_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDL5232173.1"
                     /translation="MRISYFAFAIFSIFLTACGSKPVSYLPTGSEPIVNIESDIAEKI
                     ELETNSKQFSTTNLTEFPLNLTYKLFWYNKDGVTQSHNGISDSIGWQHLWLQPKQKQT
                     IALIKPTEESHNYRLYLRGVK"
     gene            complement(2596..3225)
                     /locus_tag="PXB09_000005"
     CDS             complement(2596..3225)
                     /locus_tag="PXB09_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5232174.1"
                     /translation="MFNLQIIPVSPFQQNCTVIWDENKNAAIIDGGDNAEGIIQFVES
                     QQLKVQKLLITHGHLDHIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPV
                     NGFLPDHWLEEGDRVEVGELSYTVRHLPGHAPGHIGFFDFDNRIAFSGDVLFQNSIGR
                     TDLYLGNHSQLLETIREKMFDLDDDFIIIPGHGPHTTIGREKQTNPFLK"
     gene            complement(3242..3796)
                     /locus_tag="PXB09_000006"
     CDS             complement(3242..3796)
                     /locus_tag="PXB09_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDL5232175.1"
                     /translation="MKQINVQRRKWLSLGGLVLGASLLPGQVMAALSTPAPAALRFRN
                     VNTGDTYTAKFGAGGLNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRRLGFHN
                     AEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAESLNN
                     GGVGYYPRSNFVHVDTGPVRTWRG"
     gene            complement(3966..5471)
                     /locus_tag="PXB09_000007"
     CDS             complement(3966..5471)
                     /locus_tag="PXB09_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDL5232176.1"
                     /translation="MVAFSGMALAETATVAQVASEPVVQDNILPQLSFAAQQARAAEL
                     VKQADYALEQEQIRQEQARKFAEAEARIKQEIGNNALLLSQATTKVYLDSEFATMWND
                     KAAEKAFLKEYALFAVSGVSSKSAKALQQILNQPEGLGRDILLTDGFLDYLYYNKNVF
                     KNANNWLYNLGSYVPKSPSSEQIFQWTNAVREGDSGQFVTDLVPRNHLYRDTAQRVLA
                     MAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNGIFVNIPSYQLY
                     YFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPG
                     YADRASFEILDSSGNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSD
                     AIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEAGWGSDKKNQVLGSKKTT
                     SAQIRSDNPVYLYYVTAWVEGGKVQTLPDIYNFDAKIPQHSVNWGKLKSII"
     gene            complement(5589..7601)
                     /gene="prc"
                     /locus_tag="PXB09_000008"
     CDS             complement(5589..7601)
                     /gene="prc"
                     /locus_tag="PXB09_000008"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDL5232177.1"
                     /translation="MKLTRLNKIFALALGLMIGNAFAVQPDIKESAIVMPKPNEQHSL
                     STKRVTARLTQSHYHKFQLNDEFAGKIFNRYVDWLDPSHNTFLQADIDEMRSKYATTL
                     DDDLYAGKLDAAFAMYELMSKRRYERYSYALSLLDKEPDLKGNDEIEIDREKAAFPKS
                     VEEANTLWEQRVKNDIINLYLKDKKWPEIKKTLTKRYNFAIKRLTQVKADDILQTYLN
                     SFSREIDPHTSYLSPRAAKAFQESMNLSLEGIGATLTQEDDVTSIRALVPGAPAAKSK
                     KLVVGDKIVGVGQGERGEIEDVIGWRLDNVVDKIKGKKGTKVRLEIEPEKGGKTKIIT
                     LVRDKVRIEDSAAKLTVEKVDGKNVGVIKIPTFYIGLTSDVRKLLTQIEKKNVEGLII
                     DLRENGGGSLTEVIELTGLFIKDGPVVQVQDAFNRIKVHEDPESKSVYDGKVMVMINR
                     HSASASEIFAAAMQDYNRAIIVGQQTFGKGTVQQSRSLNFVYDLDQEPLGFIQYTIQK
                     FYRINGGSTQLKGVEADIKFPEIINAAKTGESFEDNALPWDKIPAANYKEAGNARNAV
                     AALTAKHQERIAKNPEFIVLNENIAIRKERDERKFLSLNLEERLKENKADESKRLKDI
                     NARFAREGKKALKDIDDLPKDYEAPDFFLKEAEQMMLDWSEFDKKS"
     gene            complement(7687..8223)
                     /gene="proQ"
                     /locus_tag="PXB09_000009"
     CDS             complement(7687..8223)
                     /gene="proQ"
                     /locus_tag="PXB09_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDL5232178.1"
                     /translation="MSEQIEQKVEQTQNKTNPSTKEVIAYLAEKFPLCFTLEGEVKPL
                     KVGLFQELAEALKDDEKISKTLLRQVLRNYTNSWRYLAASQANVARVGLQGEEVGVVT
                     EDEATHAAEALAAAKAVVAERKAQERKAQRKEYFKQKAREENAKKRAEFKAKKAIDNL
                     PKASEEKLAALADKFGRK"
     gene            8551..8763
                     /locus_tag="PXB09_000010"
     CDS             8551..8763
                     /locus_tag="PXB09_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDL5232179.1"
                     /translation="MSAITGTVKWFNATKGFGFITPDQGGKDVFVHFSAIEANGGYRT
                     LEDGAKVQFEIQDSERGASAVNVKTI"
     gene            complement(8823..9977)
                     /locus_tag="PXB09_000011"
     CDS             complement(8823..9977)
                     /locus_tag="PXB09_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDL5232180.1"
                     /translation="MMKVSPFQWAAFNYFGFFCAYGVLLPFLPVWLKHHGYSTEMIGL
                     FAAVGYLFRFAGSMLASQRVKTVSQLIPTARSLTWLNIAAAAALLFSGDFIWLLFPVL
                     MLFQMFNSGAMPIADSIASIWQHQIGLDYGRARLFGSMAFVVGSLSAGYLIGLLGENS
                     VVWIIIGFLVFLGIGQLATPKVGFEEQGNKANTSSVTYRQLLKEPETLKMLIAVSLIS
                     ASHAAYYTYSTIHWSNASISTAMTSLFWGLAVVAEILFFLVSKRLFKSWKISHLMILA
                     AVFAVIRWAIMGSTTEIVLIIVMQMLHSITFGAAHIAMIRYISMQSAERVTKLQGLYF
                     GLASCAFMAVFTFIAGMVYQHSPSLTFWLMAIFTLPAIFIVPKRFEVQIN"
     gene            complement(9974..10792)
                     /locus_tag="PXB09_000012"
     CDS             complement(9974..10792)
                     /locus_tag="PXB09_000012"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDL5232181.1"
                     /translation="MNEKKLAFIGTGNMAYAIIQGLLKSGYSAEQIIACNKSNLARRE
                     ELQAVGIATNFANREAVEQADVIVLAVKPQMMAQVCAEFADVDFSNKWVISVAAGISV
                     QRLETLLPSAKNIIRTMPNTPSLISEGMTGLFAKKSVNPTACQFAEQLMSAVGKCYWV
                     ETEEQINHIIAITGSSPAYFFRFMEAMQQSAVQMGFSEQDARTLVQSVALGAAKLVEA
                     NPTTPLSTLRENVTSKGGTTAKALEVFEQHDLAKTVDDAMWAAIHRAREMEQSL"
     gene            10869..11777
                     /gene="rdgC"
                     /locus_tag="PXB09_000013"
     CDS             10869..11777
                     /gene="rdgC"
                     /locus_tag="PXB09_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDL5232182.1"
                     /translation="MVWFKNVMIYKLTGELALESNSLNELQQETRFTPCSQHDMSKFG
                     WATPLTGSDLLHFSQANQFLLISHKEDKLLPANVVKAETEQRIAELEEKEARKLKKTE
                     KQAVKDQVVSALLPRAFSKHQFTALWLDLDNQLVYVDAASSKRAEDTLALLRKTLGSL
                     PVVPISFTLPPAEVMTNWIAKGHTPSWLNLLEEAELKSFDTDSIIRCKRQDLETEEIA
                     RHLQAGKFITKLAIEWEGHFNCVLNEDATLSRLKFADEVREKNDDILKEDVAQRFDAD
                     FLLMTEELKLFTEKMIAEFGGIKSRI"
     gene            11798..12403
                     /locus_tag="PXB09_000014"
     CDS             11798..12403
                     /locus_tag="PXB09_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HDL5232183.1"
                     /translation="MLDQTIIDQYDALIFDMDGTLIDTMPSHAKAWEKVGEVLGYPIN
                     PKPMYELSGSTTFVIAREIMQRSNIPEHYFEQVVQLKREFGIEMVLANATLLPAFEII
                     KANVGKKPMAIGTGSHRAMVELLDQKFNLRQYVSVIVDSDDVSNHKPAPETFLKCAEK
                     LGIAPHRCLVFEDADLGVQAALNGNMNVFDVRTNTITHSTR"
     gene            12419..13210
                     /locus_tag="PXB09_000015"
     CDS             12419..13210
                     /locus_tag="PXB09_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDL5232184.1"
                     /translation="MKTEWIKHLIQQLTTLSKAIENYFTSGSFGVKFYPFLMHPCFRK
                     SCAFLIFIIAMVSSFSGLFYLVAEHITILFSERSLTTYFHHSTLELMIPVGTMIDEKI
                     SELSPLSVVMRSMFVLQAVVFFFIYAIGITHIAHNKLRVIGLLLSLCFAIGCSLVAGI
                     QPSSRGEFGIYNLGASITFLIGNLTLIIAGFDLYHPSMQFFKRFSIGAGVIGAICILI
                     TIFLPTLFSPLIERAGIYTIMLWEILAGFAIIKRLLKLPSFRQQG"
     gene            13214..14356
                     /gene="argE"
                     /locus_tag="PXB09_000016"
     CDS             13214..14356
                     /gene="argE"
                     /locus_tag="PXB09_000016"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDL5232185.1"
                     /translation="MKQIPFIQRYAQLIELPTISSLVAEEDLSNRRLIELLATWLADF
                     GFKTEILAVEGSRNKYNLLATYGEGEGGLLLAGHTDTVPFDEGKWRFNPFQLTEKAGK
                     LYGLGTADMKGFFAFVVEVVSQLDLTQIKKPIRILATADEETTMLGARTFAQHSHIRP
                     DCAIIGEPTSLKPIRAHKGHIGESVRITGRSGHSSDPAKGINAIELMHQSIGYLMKMR
                     DELREKYHNPLFQVTHPTMNFGNIHGGDAINRICACCELQFDMRPLPNMAVQDLYAMV
                     NEHLKPMLEQYGDLIEIRHLHDGIPGYECEHSAQIVQVVEKLLGEKCDAVNYCTEAPF
                     IQQLCPTLVLGPGSIEQAHQPDEFLEMKYIEPTKELLTKLIYHFCG"
     gene            complement(14503..14790)
                     /locus_tag="PXB09_000017"
     CDS             complement(14503..14790)
                     /locus_tag="PXB09_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5232186.1"
                     /translation="MPKSWELSLTARSNVIEILQSVEDYTGHWLSAVSLWEQLQNKLD
                     LIAFMPTIGRRREDGTLETFCRNYRIVYEIHLEKVYIITIIHSRRLYPRPS"
     gene            complement(14783..14974)
                     /locus_tag="PXB09_000018"
     CDS             complement(14783..14974)
                     /locus_tag="PXB09_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232187.1"
                     /translation="MLFKEQGYDEFLAEQIKAGQEAIARGETFTKEQINNELNHLFAD
                     MQKRQQLRENENLFEVNYA"
     gene            complement(15264..15854)
                     /gene="yraP"
                     /locus_tag="PXB09_000019"
     CDS             complement(15264..15854)
                     /gene="yraP"
                     /locus_tag="PXB09_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDL5232188.1"
                     /translation="MNKLANKLLKGSLLVLGFISLQGCITTAVVTSAAVATKVATDPR
                     TTGTQVDDEILEEKVAYNINKDEQIKQEARINVVAYNGKVLLIGQAPSMDVVENAKNL
                     AAGAEGVTEIYNEIRQGEKIGFGQITQDSWITTQVKSKLLVNSEVKATEVKVVTENGE
                     VFLMGKVSQNQADAAAEAARNVGGVTKVVKVFSYAQ"
     gene            complement(15864..16448)
                     /locus_tag="PXB09_000020"
     CDS             complement(15864..16448)
                     /locus_tag="PXB09_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDL5232189.1"
                     /translation="MLNKIQDRFTESIQTQISASELLPAKLSEAANRIVACLLRGDKV
                     IVCGHGRSYGNAELLVSHLLHRYELARPSFAAVQLQLSGVLAGVVAQDNELEAVYKKQ
                     LQAVAKEGDLFIVFSPVGNEECILQAIHTAKNQHLDLDIIALTGSNNDHTLGLLDESD
                     IEISAPSTNQLRVIESHHFYVNLLCELIDHLLFS"
     gene            complement(16454..16825)
                     /locus_tag="PXB09_000021"
     CDS             complement(16454..16825)
                     /locus_tag="PXB09_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDL5232190.1"
                     /translation="MELFNKLINKREQGSFYEQKARVFLEQQGLRFVAANQAFKGGEL
                     DPIMQDGQTVVFVEVRQRKSNRFGSAVESIDYRKQQKWQNAANMWLLKQNQSLETANC
                     RFDVVAFEGNQTPVWIPNFLG"
     gene            complement(16800..18521)
                     /locus_tag="PXB09_000022"
     CDS             complement(16800..18521)
                     /locus_tag="PXB09_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDL5232191.1"
                     /translation="MATILNHTMKKALVPTAIALFISACTSVNPVTESIKNEAYSSSE
                     FYINKADQTKEAEDKISYQLLAVRKLIDENKEYEAQNTFSEILTAEMNEVQKLEYALV
                     SAQLAALQGKNEQATSQLKAIQDPLLSSAQRLRYIQTQARIAANQKDVIGIVRARSQL
                     NNFYKMNRERQENNDIIWQTLRDANRGMLEKTVPEAGEMELAGWLALINIYNQNVTTP
                     AQMPQAINNWKAQYPSHSAVAVMPTELQGVSNFQQTQLNSVALLLPLSGDAKILGDII
                     KRGFNDAKADDSTAVQTFDTDSSDVNSLISQAKQQGANVIVGPLLKSRVDEMLLSPEI
                     QNVNILALNATENVRNIAQVCYYGLSPESEAQSGAEKIYQDGNSVAIVAAPQDDYGNR
                     SAEAFAKRWRQLTNSDADVRYYNQPLDAVAAIQNAGVSKAALYILGNAEQVLEIKQGI
                     DSSTLKDRLAIYTSSRSNSPNNGIDFYTSMEGVKFSEVPLLADQSSSEYKKAENLANS
                     DFSMMRLYAMGADAWSLATKFNEFRHIPGYKISGLTGELKAGQHCNIERSLSWMQYRN
                     GAIQQAY"
     gene            18595..19467
                     /gene="rsmI"
                     /locus_tag="PXB09_000023"
     CDS             18595..19467
                     /gene="rsmI"
                     /locus_tag="PXB09_000023"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDL5232192.1"
                     /translation="MKNRQNSSGINPNYGILYIVATPIGNLGDITQRALDTLSSVDLV
                     AAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAVVLVEKLAKGENIALISDAGTPLIS
                     DPGFHLVRHCRQAGVKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKTKSRCDKLT
                     ELENEPRTLIFYESTHRILDTLADMQTVFGEDRYVVMAREITKTWETIYGDQLGNLIE
                     WLNEDSNRIKGEIVLVVEGKPQSSEEAFSSQAIKLLTLLCQELPLKKAAAIVAETFGY
                     KKNALYQYGLEHFE"
     gene            complement(19712..20878)
                     /locus_tag="PXB09_000024"
     CDS             complement(19712..20878)
                     /locus_tag="PXB09_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5232193.1"
                     /translation="MTNLLLAIIYLSFISLGLPDAILGSAWPSMHQQLAVPLSYAGVV
                     SMIMSIGTITSSLMSDKLTYHLGTGKVMVISVALTALALWGFSISDAFWILCLWAIPY
                     GLGAGAVDAALNNYVAVHYASRHMSWLHCMWGVGASIGPHILGYALLQGRGWEAGYFT
                     ISMLQIGLTLMLFCSLPFWKLRKQITAEINHSAKPMSLKETLKIPGVKYGILAFFGYC
                     GVEQTAGLWASSYFVMVKDVGLEQAAAFGSIFFIGITVGRGVSGFLTLKFSNRQMIKL
                     GSALILVGIAILCLPLGKYVTLASLIIIGLGCAPIFPCLIHSTPAFFGEDKSQSVIGV
                     QMASAYIGVLLLPPIFGFIANAISIQLLPLYLLLMFAIMAYAYRNLVRETSPSP"
     gene            complement(21030..22544)
                     /gene="putP"
                     /locus_tag="PXB09_000025"
     CDS             complement(21030..22544)
                     /gene="putP"
                     /locus_tag="PXB09_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDL5232194.1"
                     /translation="MFGLDPTTIMFVVYILGMIAIGFIAYRVTNNLSDYILGGRRLGS
                     FVTALSAGASDMSGWLLMGLPGAVYAGGLIEGWIAIGLTIGAYLNWKLVAGRLRSHTE
                     HSGDALTLPEYFHNRFGDKTRLIKILSAVIFLLFFAIYCASGVVAGARVFENLFGLPY
                     HQAIWYGAVATILYTFIGGFLAVSWTDTIQASLMVFALILTPFFVMYNLGGFDEMQAL
                     IDRAGEMAQKDYNDIFTGTSVLGIISLMAWGLGYFGQPHIVVRFMAAESVKSLENARR
                     ISMTWMIICLLGAIGIGYFGMAYFFGNPEQVGNISKNPEQIFIELAKLLFNPWVAGIL
                     LSAILAAVMSTLSAQLLICSSAITEDLYKGILRPQASDKELVWLSRLMVLAVAALAIY
                     IAQDPDSKVFGLVRNAWAGFGSAFGPVVLLSLFWKRMNGFGAIAGMLTGALIVHFWGD
                     ITLKLALPEIYSMIPGFIAATLMIIVVSLITPMPSKAVLDTFDRANKAYLAEVK"
     gene            complement(22638..23426)
                     /locus_tag="PXB09_000026"
     CDS             complement(22638..23426)
                     /locus_tag="PXB09_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDL5232195.1"
                     /translation="MNAKKEKESSGNQSLIRGLTLLELLAKFPNGCPLAHLAELSGLN
                     KSTVHRLLQGLQQEGYVRPAPTAGSYRLTTKCLAIGQRALSSINILHIAAPHLEALNL
                     TLGETVNFAMRENDHAILINKLEATTGMMRTRAYIGQQMQLYCSGMGKLFLAYGSADY
                     IPQYWQTKSDIIQKLTVNTITTIDGMQTELETIRRQGFAMDNEENELGVSCIACPIFD
                     HQQKVHYAISVSLSTARLNQLGRENLLPAIQETAEKISAELGGR"
     gene            complement(23423..24001)
                     /locus_tag="PXB09_000027"
     CDS             complement(23423..24001)
                     /locus_tag="PXB09_000027"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDL5232196.1"
                     /translation="MNQSSLTDLRSQLRQSMRLKRQSLTAGQQTQAAESIIPQALSLI
                     ESYQVSHIAFYLPFNGEISPIPLMEQLLQQGKKLYLPLLHPFTSGQLLFVNYNCKTIL
                     KFNRLGIQEPILDVRNILPLQELEMIFTPLVACDKAGNRLGMGGGFYDRTLAQAPHLI
                     SVGLAHECQQVEQLPIESWDMPLDHIILGAAK"
     gene            complement(24003..24194)
                     /gene="ssrS"
                     /locus_tag="PXB09_000028"
     ncRNA           complement(24003..24194)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PXB09_000028"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(24299..24589)
                     /locus_tag="PXB09_000029"
     CDS             complement(24299..24589)
                     /locus_tag="PXB09_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDL5232197.1"
                     /translation="MSANNIELQIFGQVLRLQCPVEQQEHLLASAQRLEERVVVLKEQ
                     SGIIQLEKVLAIVALNLNYELEQAQRQNAENKNVLVACIEQLDNSLGKFQSN"
     gene            24668..25225
                     /locus_tag="PXB09_000030"
     CDS             24668..25225
                     /locus_tag="PXB09_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDL5232198.1"
                     /translation="MAITDSQQFKQLVSQLQIDDTPAEFHGFLCGLIAGGIQDESWKT
                     LTYQFTNDGHAFSIEPLNTLTDFYQQLSESFSEANTLFSLWLPQNEEDGFALADGISE
                     WTNSFLLGLGVAQPKLQQETDEVGEAIDDLDEIAKLGYSDDDNNEELLEAGEEVLEYL
                     RVLALFLHSHFALGVPKTEEKPPLH"
     gene            25323..26387
                     /gene="hemE"
                     /locus_tag="PXB09_000031"
     CDS             25323..26387
                     /gene="hemE"
                     /locus_tag="PXB09_000031"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDL5232199.1"
                     /translation="MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAG
                     DFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARP
                     VASLNDVNQLPIPDPEDELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTKIKKMLYAEPHILHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHED
                     YKAFSLHYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIA
                     DARRRIGDKVALQGNMDPSVLYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVP
                     VESPKVFVDAIHNYSKQYHK"
     gene            26534..27124
                     /locus_tag="PXB09_000032"
     CDS             26534..27124
                     /locus_tag="PXB09_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF416 family protein"
                     /protein_id="HDL5232200.1"
                     /translation="MRNPIHKRMERFEPWQNTTFMACLCERMYPNYQLFCEVTEQPEK
                     AKVFQNILNLVWEYLTIKGAKINFDNQLEKLEEIIPDVNEYAFFGVLPAQEACEALSE
                     LLHSIIAGSTLEQAIRISQISLGTVASYLEMQQDKELNEQELKNSEEIQEELDVQWQI
                     YRLLNECEKRDLDLIFELKDEIRSSGISNIGLNINQ"
     gene            27260..27532
                     /locus_tag="PXB09_000033"
     CDS             27260..27532
                     /locus_tag="PXB09_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDL5232201.1"
                     /translation="MNKTELIDAIAAGANLTKKDAKAALEATLDAISASLKAGDAVQL
                     IGFGTFKVNERKARTGRNPKTGEEIKIAAAKVPAFVSGKALKDLVK"
     gene            complement(27621..28181)
                     /locus_tag="PXB09_000034"
     CDS             complement(27621..28181)
                     /locus_tag="PXB09_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232202.1"
                     /translation="MKKSFLSLLVLGTTMALAACDQAKEAAQSTTDKAVEVKEAVAEK
                     AAEVKSATEAKVEELKAAANDAAQATADKTEEAKKAVAEKATELKTTTEAKVEELKAA
                     ANDAAQATTDKTEEAKKAVAEKAAELKATTEAKVEELKAAASDATQATADKAEEAKKA
                     VAEKAAEVKVETETKVEEMKKAIESK"
     gene            complement(28327..31269)
                     /gene="rne"
                     /locus_tag="PXB09_000035"
     CDS             complement(28327..31269)
                     /gene="rne"
                     /locus_tag="PXB09_000035"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDL5232203.1"
                     /translation="MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKG
                     KITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIV
                     QVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
                     PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAI
                     RDYLRRDIGEILIDNKKVFEKAKNHIRLVRPDFINRVKLYEGEVPLFSHYQIESQIES
                     AFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALNTNLEAADEIARQLR
                     LRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFARISRFGLLEMSRQRLS
                     PSLSEASSHICPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYL
                     LNEKRKAISSIEKRHDVQIVVVPSESMETPHFSVYRLRENEITPTLSYDLTKHYEARH
                     EEEHPHHHHQEDVLVTRNEPVITVESVLQSSELNLQPSPTPTEPPKPSLLSRLIATIK
                     GWFSEEKVEEKPKPKARNQRERRQRRERPNRNAKAENQERKTPQAQTTPAEEKPMRSE
                     KKARRAVVEEVSGVTEQESRSNSREVQTERRQRRDLRKKVRIETQEVEVENLTPAVEE
                     TVAKQVENVQKNQQIQPLATQEVPVETAPEVETTNEGRENNRQRRLPRHLRVGNQRRR
                     ENQRNQVISPMPLTSAVASPELASGKVWVQVTSTVKVEEKASFLSVDQMLEQQENQLV
                     ETEKKSEEKKLHTVSPLGGFVAQATNRDLVKEKQEQLSKPKEEKVASEDVKPVEVKEH
                     IAPFGSVVAQHSERDLVKEKNERVSKFQSQATVAPAIVEEVTNPIEVPKSTYESDYRF
                     NGRLGTFSRVEHTQAAMTIASAPSDKLEVVEISQWQNSKYYFYGKGFGGYTSAVSQVQ
                     SAPRSTNG"
     gene            complement(31726..32571)
                     /locus_tag="PXB09_000036"
     CDS             complement(31726..32571)
                     /locus_tag="PXB09_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDL5232204.1"
                     /translation="MMSQEQFEEINQERRQALNHGSRIAMAASVLGALGIASTANAKQ
                     ASAEKSPYAEPEQYGLKRHGMTIDPKRVALVVVDPQIDFLGPKGVMWGVLGDSIKENN
                     TVANIESLFKAAKAVDMPTFVSPHYYYPTDHKWEFGSPGEHFMHDSGMFARKGQYTME
                     GFENSGADFMPEYKPYIFDGKTVITSPHKIFGPETNDLVLQLRKRKIDQVILAGMAAN
                     LCIDSHLRELIEQGFEVTVVKDATAGPRIPEGDGYLAALTNYRIIANDLWTTEEAVKK
                     MTAKA"
     gene            32698..33522
                     /locus_tag="PXB09_000037"
     CDS             32698..33522
                     /locus_tag="PXB09_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5232205.1"
                     /translation="MDSLTHLFTQFQFRTDLFHLGQLCQIGSFNEENKGYLHFVRQGR
                     FILNQAAERPITIERPAIIFSPTNILHSLHPLDDSGLDIFCINFDFGKGIRNPLTHTL
                     HNIVILELAQYPELGVLADQIFSEVNQKGCGYQAMIHHLCAYFTLKVARQCLEKGYIQ
                     TGLLKGLADKQLGKVLLAIHNAPERDWNVEELANVALMSRSRFAAYFKQTMGVSPMDY
                     LTNWRLAVAQHLLQKGIPVALVAEQVGYSHNAALSRVFMRELGLSPTEWLAQNKES"
     gene            complement(33607..35070)
                     /gene="ubiD"
                     /locus_tag="PXB09_000038"
     CDS             complement(33607..35070)
                     /gene="ubiD"
                     /locus_tag="PXB09_000038"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDL5232206.1"
                     /translation="MKYKNLREFLDFLESQGELVRIQQEIDPYLEMTEIADRTLRKGG
                     PALLFENPKGYQMSVLCNLFGTPKRVALGMGQEDTKALRELGKLLAFLKEPEPPKGFK
                     DLIGQLPQWKQILNMPPKVLSKADCQQVVISGDEVDLYKLPIMHCWPGDVAPLVTWGL
                     TITQGPYKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWKAENPGKPFLVSVAI
                     GADPATILAAVTPVPDTLSEYAFAGLLRGHKTEVVKSISNELEVPASSEIVLEGYIDL
                     EETALEGPYGDHTGYYNEQEYFPVFTVTHITMRKDAIYHSTYTGRPPDEPAVLGEALN
                     EVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYT
                     KFVIVCDDDVNARDWKDVIWAITTRCDPARDTTLIEHTPIDYLDFASPIAGLGSKMGI
                     DATNKWAGETTREWGTPIEKDDNVVKRIDEIWDSLGI"
     gene            35207..36181
                     /gene="znuA"
                     /locus_tag="PXB09_000039"
     CDS             35207..36181
                     /gene="znuA"
                     /locus_tag="PXB09_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDL5232207.1"
                     /translation="MFKRTLIGLAVLGASVAQADVLTSIKPLGFIASAITEGVTETKV
                     LLPVTASPHDYSLKPSDVTQLQSAQLVVWVGDGLEGFLEKSIEKLPREKVLTLEDVDA
                     IDDIVDKASKKEDKDDDHDHKHEHKHEHKHEHKHEGHNHEGHNHDHHGHSHDEDWHIW
                     LSSEASELAAEQIAARLSEQMPEHKAKIAENLAKFKANLTAKKAEIAKQLEPVKAKGY
                     YTFHDAYGYFEREYGLNSLGSFTINPTVAPGAKTLTAIKKNIAKNKAQCLFAEPQFTP
                     KVIETLAKETKVNVGQLDPLGAKVQLSATAYPEFLQVLADEFSQCLTK"
     gene            complement(36233..36553)
                     /locus_tag="PXB09_000040"
     CDS             complement(36233..36553)
                     /locus_tag="PXB09_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnA domain-containing protein"
                     /protein_id="HDL5232208.1"
                     /translation="MIYPTCPECKSENTYHDSIQFVCPDCAYEWTGEETDQDDDVLIV
                     KDSNGNLLSDGDDVLLIKDLKLKGSSEVLKKGTKFKGIRLAQGDHNVDCGKIMLKSEF
                     LKKA"
     gene            36694..39057
                     /gene="rnr"
                     /locus_tag="PXB09_000041"
     CDS             36694..39057
                     /gene="rnr"
                     /locus_tag="PXB09_000041"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDL5232209.1"
                     /translation="MIVDPNYQQELEKYENPVPSREFILNTIREHNAPMSRDELLSAF
                     HIDDEERMEGIRRRLRAMENDGELVFTKGKRYALPEKMDLIKGTVIGHRDGYGFLQVE
                     GHEKGATKSEDWFIPNAQMVKVMHGDFVLAQPNGTDRRGRKEVRIVRVLEARKKQIVG
                     RFFLESGIGFVVPDDSRVNQDILIPDEHRMGARMGQVVVVELQERKASFSRPVGIITE
                     ILGDNLAPGMEIEIALRNHDIPHIWPEGVEKQIRQFSSEEVPEEAKQGRVDLRDLPLI
                     TIDGEDARDFDDAVFAKKEGNGWRLWVAIADVSYYVRPKTALDLEALNRGNSVYFPNR
                     VVPMLPEVLSNGLCSLNPQVDRLCLVAEMSVSSKGELQDYQFYEAVMNSHARLTYTKV
                     WKMLEGDEALRERYAPLVPHIEELYAMFQTLMKARHKRGAIEFETIENQFIFNPQGRI
                     ERIEPLIRNDAHKLIEECMILANIAAARFVEKANEPALYRIHDKPSEEKLLSFKSFVR
                     ECGLTWDVGLDPTPKDYGVLLEQIAERADKELIQTMLLRSLKQAVYAADNIGHFGLAL
                     TEYAHFTSPIRRYPDLLLHRAIKYLIEKGKGNTRYYTDGGGYHYKLDDMDEFGDKCSA
                     TERRADEATREVADWLKCEFMQDHLGEEFDGVISSVTGFGLFVKLNELLIDGLVHIST
                     LDNDYYHYDADRQRLIGGSGIIYRLGDAVRVKVINVNLDEKKIDFELLTGNKKTGKTA
                     KKKAKATEVPVFKEPKTVKKAKKVAEKKPAKSAKKRTKTTASKSRKK"
     gene            39061..39327
                     /locus_tag="PXB09_000042"
     CDS             39061..39327
                     /locus_tag="PXB09_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232210.1"
                     /translation="MDYKKQILFSLLFALVIAIISYFLFTYIPFDCSDLSKLNDSQRL
                     ECRTAEFLGVYYWLPHTTTLFFGSVLLYWAVYGMISLVQAVLKR"
     gene            39550..40008
                     /gene="mraZ"
                     /locus_tag="PXB09_000043"
     CDS             39550..40008
                     /gene="mraZ"
                     /locus_tag="PXB09_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDL5232211.1"
                     /translation="MFRGASSISIDSKGRIAIPTRYRAELLEKHHGILVCTVDIRQPC
                     LLLYPLHEWEMVEQKLLALSNFDPVQRRIQRVMQGFATECEMDSAGRILLSPTLRQHA
                     QLEQQIMLVGQLNKFEIWQDKQWQAQIAEDLAFGSSAEILDCEALKNLSL"
     gene            40024..40962
                     /gene="rsmH"
                     /locus_tag="PXB09_000044"
     CDS             40024..40962
                     /gene="rsmH"
                     /locus_tag="PXB09_000044"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDL5232212.1"
                     /translation="MSENPKHITVLLHEAVDGLAIKPNGIYIDGTFGRGGHSRLILSK
                     LGENGRLIATDRDPRAIAEAQTISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDL
                     GVSSPQLDEAERGFSFMRDGPLDMRMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERF
                     AKRIAQAVVSYNKSANEKISRTLQLAQIIADAVPFKDKHKHPATRSFQAIRIFINGEL
                     DELEKALNSALTVLAPEGRLSIISFHSLEDRMVKQFVRKHSKGMDVPRGLPILEAELT
                     KNIPLKTIGKAIMPSEAEIEANARSRSAVLRIAEKR"
     gene            40981..41292
                     /gene="ftsL"
                     /locus_tag="PXB09_000045"
     CDS             40981..41292
                     /gene="ftsL"
                     /locus_tag="PXB09_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDL5232213.1"
                     /translation="MSNERYPLHQIIIDDIFSHNKVALLLLIGVVISAVATIWITHQT
                     RLSVSEQGQLIQANQKLESQYTNLQLEENSRSSRARVDAAAKSFGLQPIKKEQEIILV
                     E"
     gene            41296..43356
                     /locus_tag="PXB09_000046"
     CDS             41296..43356
                     /locus_tag="PXB09_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsI"
                     /protein_id="HDL5232214.1"
                     /translation="MVKSVKLKRKQEAPVAKAEPQQAEGKKTPSFLPTRFRVVVFFML
                     LMVGGLLAQTAYIQLFDSERLIKEANNRSLRTKELQFTRGRILDRNGRFLSISVPMYS
                     LTLDPREYFDTKLRRSNESWRALAIEMETSKGKIEANVNKFIEKKNFSKEKVDFDPRS
                     ILNTKSEGYWTQLAQVTGLDYNSLIEKVRNNPSSVFLRLDNENLVRERQKFQALSKEI
                     GRSYNDIMDELYSKNRQRFLYLSRHQSEAISEYAKELDIDALVIKVESRRFYPLAEES
                     SQLIGFTDKDDMHGSEGLERSFDSLLIGKNGKQIIRKDAKGNIVENIRSEKQYDPQDV
                     MLSIDEELQSMVYGEIKKAVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFK
                     PELMRNRAITDTFEPGSTVKPFTVLTALQNGVTYRDEVIGTRPFVVNGHTIKDVAPRD
                     SLTLTGILQKSSNIGVSKLALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRW
                     ADIERATLSYGYGLNVTPLQLARAYATLGSFGLYRPLSITKVDPPVIGERVLPEKTTR
                     DVVHMMESVAAKGEGGHRAAVDGYRVAIKTGTIHKLEKGKYVEKYIAYTAGLAPASDP
                     RFALVVLINEPKAGNYYGGFVSAPLFSRIMGYTLKQRNIKPDNLTENTQSAVREIKLE
                     RPIN"
     gene            43365..44855
                     /gene="murE"
                     /locus_tag="PXB09_000047"
     CDS             43365..44855
                     /gene="murE"
                     /locus_tag="PXB09_000047"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDL5232215.1"
                     /translation="MKRLLPFLTELDAWVEELTELKQMTLDSRQVQAGDLFVALKGHQ
                     VDGRKFIPNAIEQGAAIILAEADEDQPEIELDPKFAKFNLDRTACCKVVSVPRLPKLL
                     SEIAGALYHNPSHKLTLAGITGTNGKTTTAQLLAQWHNLLGGKSAVMGTIGNGLYGQV
                     QEAVNTTGSAIEIQHNLANFVELGADFCAMEVSSHGLAQFRAEALDFDLAIFTNLSRD
                     HLDYHNTMEEYAQAKFRLFNELSTKAQVINADDEIGREWLTQLPNAVAVSTDPKFAGN
                     HQFVKATAVKFTLQGASIAFESSWGNGELHSRLIGAFNVNNLLTAFAGLLALGFDIQE
                     LVKTAPNLVGVAGRMECITAPNKPMVIVDYAHTPDALEKALQAARLHCEGELWCIFGC
                     GGDRDAGKRPLMATIAEKLTDKVIATDDNPRTEDNQKIMADIVKGFSKPQQIIHNREE
                     AIKTAIEQAKATDVILIAGKGHEDYQIIGTEKLHFSDQETARKYLF"
     gene            44943..46337
                     /gene="murF"
                     /locus_tag="PXB09_000048"
     CDS             44943..46337
                     /gene="murF"
                     /locus_tag="PXB09_000048"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDL5232216.1"
                     /translation="MIKLTTQQIAEILNAKLIGNGETVVETTSTDTRQAVENGLFFAL
                     KGENFDAHHYLQNAVAQGCVAVVVERECEIDVPQLVVADTRLALGELAKWLKAKLNPK
                     TVAMTGSSGKTTVKEMTAKILQKMTACEQEVLYTFGNLNNDLGVPMTLLRLTEQHKYA
                     VIELGANHIGEIAYTTAIAQPDACLVNNVAAAHLEGFGSLAGVAQAKGEIYRGLKENG
                     KAIVNLAFYYPQWQKEIGSREMQSFSYIGSDSDSYADYWAEDVELHLSGSRFTLHTPQ
                     GEIAIDLPYLGKHNVSNALAATSLAMSVGATLEAVKAGLEQRSMVKGRLYPVQINDHC
                     LFIDDTYNANVDSMKSAISVLENYPAYRIFAVGDMAELGEESSKCHQEVADFAKNAAL
                     DLIVSFGKESAVISQQAEHHFTDKQQMVDFLLPIILQKIEQKQPLVLLAKGSRSQKME
                     TVISELCKPFNLNF"
     gene            46358..47440
                     /gene="mraY"
                     /locus_tag="PXB09_000049"
     CDS             46358..47440
                     /gene="mraY"
                     /locus_tag="PXB09_000049"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDL5232217.1"
                     /translation="MLVWLAELLVQYNTAFNVVSYITFRAIMALLTAMGIGLWIGPKV
                     IRRLQILKFGQEVRNDGPESHFKKRGTPTMGGVMILAAIGVSTLLWADLRNSYVWFTL
                     FVLFGYGAVGFVDDYRKISRKNTDGLIARWKYFWLSAIALVAVFGMYAVGKDTAATQL
                     VVPFFKDVMPQLGLFYIVLSYFVIVGTSNAVNLTDGLDGLAIVPTIMVASAFALIAWA
                     TGNFNFAQYLHIPFIPNAGELVILCTAIVGAGLGFLWYNTYPAQVFMGDVGSLSLGGA
                     LGVIAVLVRQELLLVVMGGVFVVEALSVILQVGSYKLRQKRIFRMAPIHHHFELKGWS
                     EPRVIVRFWIITLMLVLVGLVTLKLR"
     gene            47504..48805
                     /gene="murD"
                     /locus_tag="PXB09_000050"
     CDS             47504..48805
                     /gene="murD"
                     /locus_tag="PXB09_000050"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDL5232218.1"
                     /translation="MQKQYENKTVTIIGLGTTGLSCVDFFKKKNANIQVIDTRANPAG
                     ADKLDVTIPLHTGGLNSEWLLKSDLIVISPGLAVATPEIQQAIQAGVEIVGDVELFCR
                     EAKAPIIAITGSNGKSTVTTLTTEMAKQAGIKVGMGGNIGVPVLSLLEGDYDLFVLEL
                     SSFQLETTYSLKAKAATVLNISEDHMDRYDSIADYRQAKLRIYDNAENIIVNGEDAQT
                     YPIQAVKKVIRFAEQNAEYSLRNQMLYSGDDAIIQTKQMLISGRHNEMNALAAMALAE
                     AANVPREGIVKALQIYGGLPHRFQAVATNDGVRWVNDSKATNVGSTVAALNGLNIAGT
                     LYLLLGGDGKAADFSELKPLINKPNIVCYCFGQDGAALAELSEQSVLVETMQQAIEAI
                     RPQLKKGDMVLLSPACASLDQFKNFEQRGEVFMALAQGQHA"
     gene            48805..49983
                     /gene="ftsW"
                     /locus_tag="PXB09_000051"
     CDS             48805..49983
                     /gene="ftsW"
                     /locus_tag="PXB09_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDL5232219.1"
                     /translation="MLERIKSEWDKWVRLTPSNSLYDRTLIWLFLGLLIIGFVMVTSA
                     SLPVSTRLNNDPFYFAIRDGLYIIASIIFCYVFVQIPIEKWEKHNLALFFISIGFLIA
                     VLIFGRSINGAVRWIPLGILNFQPAELAKLAVICYFASFYVRKYDEIRKEKASFWRPA
                     VILFLFGFLLILQPDLGSTFVLFVLTFSMLFIVGAKIMQFMFLGVVGTVLFAVLILTS
                     EYRLKRVTSFMDPFADAYGDGFQLSNSQMAFGQGEFWGQGLGNSVQKLEYLPEAHTDF
                     VMAVIGEEFGFFGIACIVLLLILLTVRALKISKESLVLEERFKGYMAFGIAIWVFLQG
                     FVNLGVASGLLPTKGLTFPLVSYGGSSLVIMSIAIAVLLRIDHENRAERIGHAKIKTI
                     "
     gene            50102..51157
                     /gene="murG"
                     /locus_tag="PXB09_000052"
     CDS             50102..51157
                     /gene="murG"
                     /locus_tag="PXB09_000052"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDL5232220.1"
                     /translation="MAKKLLVMAGGTGGHVFPAIAVARELQKQGWQIRWLGTKDRMEA
                     TLVPKHGIEIDFIEISGLRGKGVAALLKAPFAIFKAVMQARKIIKNYQPDAVLGMGGY
                     VSGPGGIAAKLCGVPVILHEQNAVAGLTNVWLSKIARKVLQAFPTAFKEAEVVGNPVR
                     EDLSALPLPNERFAKRGYPINILVMGGSQGARVINQTVPEVAKVLGNNVFISHQVGKG
                     NLAGIEEVYQQTGNGIASEFIDDMKAAYEWADLVICRSGALTVCEIAAVGLPAVFVPF
                     QHKDRQQFLNANYLAADGAAVIIEQSDFTPKALQQALEPLIANRQLLLDMSMRARAKS
                     TPMAAKRVAEVIIQEAN"
     gene            51233..52660
                     /gene="murC"
                     /locus_tag="PXB09_000053"
     CDS             51233..52660
                     /gene="murC"
                     /locus_tag="PXB09_000053"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDL5232221.1"
                     /translation="MKNFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYQ
                     ISGSDIADRAVTQRLSAAGAKVFIGHQAENIAGASVVVVSTAIDETNPEIIAAREARI
                     PVIRRAEMLAEIMRFRHGIAIAGTHGKTTTTAMISMIYTEAKLDPTFVNGGLVKSTGK
                     NAHLGASRYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLR
                     NLPFYGLAVMCADDETVMEIAPRVGRQVITYGFSENADYRIEDYQQTGFQEHYTVVCP
                     SGERIDVLLNVPGMHNALNATAALAVAKEEGIGNEAILAALADFQGAGRRFDQLGSFI
                     RPNGKIMLVDDYGHHPTEVDVTIQAARSGWEGKRVVMIFQPHRYSRTRDLFDEFVQVL
                     SKVDALILLDVYAAGEAPIVGADSKALARSIRNLGKVDPILVSDTDQLGEVLDQIIQD
                     GDLILAQGAGSVSRISRGLAESWKN"
     gene            52750..53661
                     /locus_tag="PXB09_000054"
     CDS             52750..53661
                     /locus_tag="PXB09_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDL5232222.1"
                     /translation="MSIKNEKIAVLFGGVSQEREVSLNSGAAVTAALKSLGYNVEGID
                     TKEFPIEKLKEKGIQRVFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFR
                     TKLLWNAVGLPTADMVVVQRGQAVDFDQIIAKLGLPVFVKSSCEGSSVGVFKVKTKEE
                     LAPAIHEALKFDSIVLVEEFLAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDN
                     TQYVVPALNDERQAEVAKLVKAAYDVVGCRGWSRIDVMEDGEGKFRLVEVNTNPGMTS
                     HSIFPKSAATVGISFEKLVERVLELSA"
     gene            53661..54452
                     /locus_tag="PXB09_000055"
     CDS             53661..54452
                     /locus_tag="PXB09_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDL5232223.1"
                     /translation="MGIFRKKNSTNVRLNVLNPKTPVSPRKWLVFIKPLIVLLCTLFV
                     FGVYSNWQNILESWDKTPIRAYALTHKTQFTTNADIRETLSKEPALKGYFGQNIQEVK
                     DKLLSIPWVKDVAVRKLYPDRLSITLLEHKPVAIWNDTNFVSEQGTVFSLPKDRIDKN
                     GLPLLYGPDTEGKSVLEAWNKIRADLNARNLDLTSVSVDNRGSWTIRLSNQVELRLGR
                     GEWTSKIDRFVIIFPEIHIPEGNRLAYVDLRYPHGAAVGFSPIKN"
     gene            54475..55746
                     /gene="ftsA"
                     /locus_tag="PXB09_000056"
     CDS             54475..55746
                     /gene="ftsA"
                     /locus_tag="PXB09_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDL5232224.1"
                     /translation="MTKAVESKIIVGLDIGTSKVVAVVGEVLPDGVINVMGAGVCPSK
                     GVDRGGVIDLDAAVNSIQRAIEQAESIADCQIMGVTLAISGQHIVGLNEAGSSTLSGG
                     IVTQDNIESAVDMAKAIKLQDGLETLHMIPQEYHVDRLPATKNPIGLSGMRLQVQAHL
                     IACHQAWLKNLKNAVEHAKLKVDQVVFSGLASSYSVLTEDEKELGVCLIDIGGGTMDV
                     LVYTDGALRYSKVIPFAGNNITDYLARVFTTSRPEAESLKVGYGSAISPPTHNSDKKI
                     EVAGLGGRMARTFTRAQVATVTSQCYNDLLKVVEEELTQLRHELFQKGIKQELIAGVV
                     ITGGGSQIEDIVECAKSIFGSQVRVGYPLNITGLTDYVNKPQYATALGLLQYSHYNYT
                     EQGTSTDSNEDIFAPIGRGTKKIIDFFKSKF"
     gene            55779..57026
                     /gene="ftsZ"
                     /locus_tag="PXB09_000057"
     CDS             55779..57026
                     /gene="ftsZ"
                     /locus_tag="PXB09_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDL5232225.1"
                     /translation="MFEPIIEQTQDAIIKVVGVGGGGGNAVDRMSRSADDIKGVEFFD
                     VNTDAQVLRKRTTRQTIQIGASTTKGLGAGADPMVGKQAAEEDREAIANALKGANMTF
                     IAVGMGGGTGTGAAPVVAQIAKEQGSLTVGVVTKPFRFEGPRRMRFADQGIKELSQYV
                     DSLIIIPNDKLRGLGKQTTAVDAFAAANDVLSNCVLGITNMITSSGGSTGADINVDFA
                     DVRTVMSGKGHAMIGTGFAEGEVGEGRAEKAMNDAISSPLLENVDISGASGMLINISA
                     GTDFLLEEVYAMMDLIYGFATEDAAIVFGCNYYPEMDGKVSVTLVATGIGQPEEALHM
                     PHKAQPVYAQQGNHVQATQPTQPNHAVQQPNFTQPSSYGQPNQFSGQPQPLQQPVAPK
                     PQSVDTAQIFNPNSIPGFMRNSQ"
     gene            57058..57978
                     /gene="lpxC"
                     /locus_tag="PXB09_000058"
     CDS             57058..57978
                     /gene="lpxC"
                     /locus_tag="PXB09_000058"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDL5232226.1"
                     /translation="MTKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDL
                     EPVVYFPASADSIRDTQLCTCMVNDDGVRISTVEHLNAAMSALGLDNVIVEVDAPEIP
                     IMDGSSSPFIYLLLDAGIEEQDAPKKFIRIKETVRVEEGDKWAELKPYNKGFKLNFTI
                     DFEHPLIPKNVGSYSIDFSAENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIV
                     LDDYRILNEDGLRFKDELVRHKMLDSIGDLYMCGYNILGEFSAYKSGHGVNNKLLRAV
                     LENKNAWEFVTFEDKAEVPQGYQVQQEIFI"
     gene            58151..59833
                     /gene="recN"
                     /locus_tag="PXB09_000059"
     CDS             58151..59833
                     /gene="recN"
                     /locus_tag="PXB09_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDL5232227.1"
                     /translation="MLTQLTINNFAIVRHLILELNEGMSVITGETGAGKSIAIDALGL
                     CLGYRSESGMIRNGSDKADISATFTMQPHSPAYLWLQEHELLDEDNPQECILRRMINI
                     DGRSKAFVNNRSLPVSQLRELGQYLIHLNGQHAPQLLLKNEYQLEIVDHYATLQPLLM
                     KMAKQYGNWKELNKQVKNFQKQCQENEARKQLLEYQVEELDEFAIKANEFEEMEEKYN
                     ILSSSEELTELSDEITRLLSDDEINANSLIYKALRNAENLAEVDSQYQGILDMLNEAL
                     IQIQEASSEVAQLASKIEQDPELLQELDNRIAQTISLARKHHIQPNELWQYHATLKAE
                     LQELLDFEDNEEQLIQNEKQAYQECITLAEEIYQKRLDATHKLSEQVTKQIKHLAMEN
                     GEFFIHIEHNLEKMSANGADYVEFNLRSNLGQQPQPLAKIASGGELSRISLAVQVLTA
                     NKLSTPTIIFDEVDVGISGSAATTVGKLLRKLGEKCQVLCVTHLPQVASYGNQQFNVQ
                     KYVENNQTETQMTLLTEAERIHALARLLGGSEITETVLANAKEMLNLAKNNE"
     gene            complement(59880..59955)
                     /locus_tag="PXB09_000060"
     tRNA            complement(59880..59955)
                     /locus_tag="PXB09_000060"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(59920..59922),aa:Ala,seq:ggc)
     gene            complement(60035..61474)
                     /gene="gltX"
                     /locus_tag="PXB09_000061"
     CDS             complement(60035..61474)
                     /gene="gltX"
                     /locus_tag="PXB09_000061"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDL5232228.1"
                     /translation="MKIETLFPLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKH
                     NDGEFVLRIEDTDLERSTPEATAAILEGMEWLDLAWEHGPYFQTKRFDRYNQVIDQML
                     EAGTAYRCYCSKERLDEVRAEQEANKEKAKYDQHCLHNPQNDPSQPHVVRFKNPTEGS
                     VVFDDAVRGRIEIANSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNT
                     PRQINILKALGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLV
                     RLGWGHGDQEIFSRDEMIELFDIHSVSKSASAFNTEKLQWLNQHYIRSLAPSYVAKHL
                     EWHMQTQGIDFTSGPKLEEIIPVLGERCKTLKELAESSRYFYQEFKAYDEKAAAKNFK
                     AEAVAPLAKLLEKLTACNDWTVENIHEAMNQTAAELEIGMGKVGMPFRLAVTGSGQSP
                     SMDITAKLVGKERTLARLQKAIEFIQANS"
     gene            61649..61724
                     /locus_tag="PXB09_000062"
     tRNA            61649..61724
                     /locus_tag="PXB09_000062"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:61682..61684,aa:Val,seq:tac)
     gene            61773..61848
                     /locus_tag="PXB09_000063"
     tRNA            61773..61848
                     /locus_tag="PXB09_000063"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:61806..61808,aa:Val,seq:tac)
     gene            61901..61976
                     /locus_tag="PXB09_000064"
     tRNA            61901..61976
                     /locus_tag="PXB09_000064"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:61934..61936,aa:Val,seq:tac)
     gene            62025..62100
                     /locus_tag="PXB09_000065"
     tRNA            62025..62100
                     /locus_tag="PXB09_000065"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:62058..62060,aa:Val,seq:tac)
     gene            complement(62254..63747)
                     /gene="mltF"
                     /locus_tag="PXB09_000066"
     CDS             complement(62254..63747)
                     /gene="mltF"
                     /locus_tag="PXB09_000066"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDL5232229.1"
                     /translation="MKGLIARLFIAVALLLWAWDMIFPWQKIIHSEANHYTQIQQSKT
                     LKVGMINHPLSYFVGPEGKSGIEYDLATAFAQYLKVNLDIKTYDSSEKLFEALRNNDV
                     DIAAAGLLYHSELNDEFQIGPSYYSASWQLVYKKGSARPYRLSDLRENVIIPAGSAVI
                     PILNQLKVDNPELKWQISDKFTQEELLLKVAQGEISHTIAMSVDISAAQHINPNLAVG
                     FDLTDENPVLWYLANSSYSELQSVLLDFMSYSMETGLISRIEEKYFNHLAKFDYVDIQ
                     SYLNAIKTILPKYEPLFRAHKGELEWQMLAAIAYQESHWDPNATSPTGVRGIMMLTKD
                     TADRMKISDRTNPAQSIKAGSEYLHMLMRQMPETIPQADRIWYSLAAYNMGLGHLLDL
                     RRLTKQLGGDPDNWLDVKKNLPLLAEKRYYANLKYGYARGYEALQYVENIRRYYGSII
                     NYQRVEEQKMQEQENLPDGQIKQENSSYEKIEEKEIPTDKEITPASN"
BASE COUNT        18756 a        13219 c        13410 g        18409 t
ORIGIN      
        1 ctttgggcgg tttttttcta tgtaaaaaaa cagcacaaaa cctagatcgc attctatatt
       61 attcgctacc tttattctag cctttctgct tttttattct ttcactttaa tctattataa
      121 aaagaggttt tatagtatgc taaagcctat ttttcatttg caataattac cgagagttct
      181 tttgagtaaa ccgaaattaa cccataacca acagcgtaga atccaatcta accatcataa
      241 gcgtatcaac aaaaaagaga ttgaatggca agatgaaatg ttaggagaaa tgcaacaggg
      301 catcgtcgtt actcgccacg ttaaacacgc tgatgttgaa accgcagagg ggcaaatttt
      361 ccgctgtaat atccgccgta cattgaaaaa tgtagtggtg ggcgatcagg tttcttggcg
      421 taaaggtagt gagcaactac aagggattag tggggtcatt gaagccgtct tcccacgtaa
      481 aaatgaactt acccgccccg attattatga cggtattaag gtgatggcat cgaacatcga
      541 tcaaatcatt attgtatcag ctgtgctacc tacactttcg ctgaatatta tcgaccgtta
      601 tttagtgatt tgcgaaacgg cgaatattcc tgccttaatc gtgctaaaca aaattgattt
      661 attaaacgaa agcgaacggc aagcagttaa agagcagctc aaaatctatg aagagattgg
      721 ctatgaaacc ctatgtttat cggctgatac gggtgaaaat atgcaggcgt tacaccaata
      781 tcttgctaaa ggtacgtcta tttttgtcgg acaatccggc gtggggaaat ccagcctaat
      841 taaccaactg ttacctgaag tcaatgctct cactggctca gtgagcgata actcagggtt
      901 aggtcagcac accaccactg cctctcgctt ataccattta ccgcaaggcg gacagctgat
      961 tgactcgccg ggcattcgag aatttggctt atggcattta gaacctgagc aaatcacctt
     1021 aggctatcga gaatttcaat cggttttagg cacgtgcaaa ttccgtgatt gcaaacacaa
     1081 aaccgacccg ggttgtgcct taagacaaga ggtcgaaaat ggcgaaattt ctgcaattcg
     1141 gtttgaaaat taccatcgct taattgaaag cctgtctgaa accaaaagcc aacgccattt
     1201 cagaaaagaa gaagtataat gaatgaattt atttacccta acgcccgatt aatcgccggt
     1261 gttgacgaag tcggacgagg acctttagtc ggagcggttg tgaccgcagc cgtgatttta
     1321 gatccgaata acccgattca gggcttaacc gattccaaaa aattatccga gaaaaaacgc
     1381 caagctttgg cagaagagat taaagccaag gctctgagct ggtcgctagg acgtgccgag
     1441 ccgacagaaa ttgatgagct gaatatttta aatgcgacaa tgttggcaat gcaacgtgcg
     1501 gttgccggct tgcatattca gccggatttt gtgctaattg acggcaatcg tccgccaaaa
     1561 ctgccaatgc cggcacaagc ggtggtgaaa ggagacagct tagtggctga aatcagtgct
     1621 gcttcgatta ttgccaaagt cgcccgagat caagaaatgg acgaattaga ccaacaattt
     1681 ccgcaatacg gcttcgcaca gcacaaaggc tacccgacta aactccattt tgaaaaatta
     1741 gcagaatttg gggcaacacc ttatcatcgt aagagttttg cccctgtaag aaaagtatta
     1801 ggtttaatcg attagaagga aaacacaatg actacagagt accaaaaaac gattttcacc
     1861 aaaatcatca ataaagaaat tccggcaaat attgtctatc aagatgaact tgtgaccgca
     1921 tttcgtgata ttgctccaca agcacccacg catattttga ttattccgaa taaatttatt
     1981 ccaaccgtca atcacgtgag taatgaagat gaattagccc tagggcgttt atttacggtg
     2041 gcggcaaaat tagcccaaga agaaggcatt gccgaagaag gctatcgctt agtgatgaat
     2101 tgtaataaaa acggcgggca ggaagtgttc catattcata tgcacttgtt aggcggacaa
     2161 aaactaggac ctttagtggc aaaataacta tgcgtatttc ctactttgca tttgcaattt
     2221 tttcgatttt tttgaccgct tgtggtagca aacctgtcag ctatttacca accggctcag
     2281 agcctattgt caatattgag tctgacattg ctgaaaagat agagctggaa acgaatagca
     2341 agcaatttag caccacaaat ttaactgaat ttccgcttaa tcttacttat aaattatttt
     2401 ggtataataa agatggggta acacaatccc ataacggtat atcagatagt atcggctggc
     2461 aacatctatg gttgcaacct aagcaaaaac agaccattgc actcattaaa ccgacggaag
     2521 aaagccataa ttaccgcctc tatttacgag gcgtaaaata gcaaaaaagc agagccaact
     2581 gctctgcttc tttatttatt tcaaaaacgg gttggtctgt ttttcccgcc cgatagttgt
     2641 gtgtggacca tgtcccggta tgatgatgaa atcatcatct aaatcaaaca ttttttccct
     2701 gatcgtttcc aataactggc tatggttgcc taaatagaga tctgttcgac ctatgctatt
     2761 ttggaataaa acatcgccac taaaagcaat acgattgtca aaatcaaaaa aaccgatatg
     2821 acccggagca tgacccggca aatgtcgaac ggtatagctc agctcgccga cttcgacccg
     2881 atcaccttcc tccaaccaat gatccggcaa aaagccattt actggtggta atccaaattg
     2941 ttggcacatt tccggcaaac gttcaaataa aggtttatct gcaagatgcg agccgaaaac
     3001 ctctacttga aaatgctctc tcaacttttc caccgccata atatgatcta aatgaccgtg
     3061 cgtaatcaat aatttctgaa ccttaagctg ctgagattca acaaattgaa taatgccttc
     3121 ggcattatcg ccgccatcaa taatagccgc attcttattt tcgtcccaaa tcaccgtgca
     3181 attttgttga aatggactaa caggaataat ttgcaaatta aacataaaat aagaccgctt
     3241 gttagcctct ccaagtgcga actgggccag tatctacgtg aacaaagtta ctacgaggat
     3301 aataacctac gccaccatta ttcaagctct cagccgcttg ttttacttta tataacggca
     3361 cacctgatac ttggaaatct actgcttgcc caagaatatg gtaactatgg ctggcaacac
     3421 cacggcttct acgacgaagt cttgcatttg tttgtgcgga gcgatagcca cttaatacta
     3481 ggatttccgc attatggaaa cctaaacggc gttgtaattg attcaatttg acaaataatt
     3541 ttggatcaat tgctttaact tgattgatat gacgatcccg cattaaatag tttaactggc
     3601 ttaaatcggt tttatttaat ccacctgcac caaatttagc agtgtaagta tcgcctgtat
     3661 tcacattacg aaaacgtaac gcagctgggg caggagtaga aagcgctgcc attacttgac
     3721 ccggcagaag gctagcccct aaaacaagtc cgccgagtga tagccactta cggcgttgaa
     3781 cattaatttg tttcattttt tcctcatagg ttagctaatg atttatagaa aatcactcac
     3841 aaatgagcga atttctatac accatactta aagtaaaaat ttacaatcgt aaatttatgt
     3901 aagctatatt ttcaaaaagt tccaagaaga tgatatcttc ttggaattta tcagaaatag
     3961 cacgattaaa taatgctctt taattttccc caattcacag aatgttgtgg gattttggca
     4021 tcaaagttat aaatgtccgg aagggtttgc acttttccac cttcaaccca agccgtcaca
     4081 taatagagat aaaccgggtt atctgaacga atctgagccg aggtcgtctt cttactgcct
     4141 aagacttgat tctttttatc agatccccaa cccgcttctt ttaataaaat ggttgccaat
     4201 tcatcagatt tttctacacg gacacaacca gaacttaacg cacgccccgt tttaccaaat
     4261 aatcctctat ttggcgtatc atgcaaataa attgcatccg aacttggcat attaaattta
     4321 taacgtccta aagcgctatc atcacctgct ttctggcgaa tacggtatgg tgaactttta
     4381 gcatttaaat attgtgacca atttacgcta cgcggattaa ttttattgcc actactatca
     4441 agaatttcga aactagcacg atctgcataa cctgggtcac gcgctagttt aggaataata
     4501 tctttagtca taatactagt cggtacattc caaggtggat tcactaccac attgctcagc
     4561 ttactataca ttaccggtgt acggcgatct tctcgcccaa caatcacttt agattgaaga
     4621 gctaaattac catcacggaa ataatataat tgatagcttg ggatattcac aaaaattcca
     4681 ttgttaaaac ttggaataat acgtaaacgt tgagcattga gcgctaattt atagaaagaa
     4741 gccccattac cgccaccagc tacctccgta acagctttac cttttttggc tttaggtgct
     4801 gaagagcctc ctgccattgc caatactctc tgtgccgtat cacgatataa atggtttctt
     4861 ggaacaaggt ctgttacaaa ctgcccagaa tcgccttccc tcacggcatt agtccattgg
     4921 aagatttgct ctgaagaggg cgattttggt acataactgc ctaagttata taaccaatta
     4981 tttgcatttt taaacacatt tttgttgtaa tacaaataat ctaagaagcc atcagttaat
     5041 aaaatatctc tacctaaacc ttccggttga tttaagattt gctgcaatgc cttagctgat
     5101 ttagaggata ccccacttac tgcaaataat gcatattctt tcaaaaatgc tttttctgcg
     5161 gctttatcat tccacattgt cgcaaattca ctgtctaaat aaaccttagt tgttgcttgg
     5221 ctcagcaata aggcattatt acctatttct tgcttaattc ttgcttccgc ttctgcaaat
     5281 tttcttgctt gctcttgacg aatttgttcc tgttctaacg cataatcggc ctgttttacc
     5341 aattctgcag cacgagcctg ctgagctgca aaacttaatt gtggtaaaat attatcttgt
     5401 acaacaggct cagaagccac ctgagcaact gtggctgttt cagccaaagc catgccagaa
     5461 aacgccacca taataggtaa taatttaaag gttttcaccc actcttcctc ttaatatttg
     5521 caaatttata aaaaaataaa ccgcttagcg gagctaagcg gtacgttatg tgcgcattat
     5581 aaacacattt atgatttttt atcaaattct gaccaatcaa gcatcatctg ttcagcttct
     5641 tttaagaaaa agtccggtgc ttcatagtct tttggtaaat catcaatatc ttttaatgct
     5701 tttttgcctt cacgggcaaa acgagcatta atatctttta agcgcttgct ttcatctgct
     5761 ttattttctt tcaggcgttc ttctaaattt aacgataaaa acttacgctc atcacgttct
     5821 tttcgaatcg caatattctc gtttaatact ataaactctg ggtttttagc aatacgctct
     5881 tgatgtttcg ctgttaatgc agcaaccgcg ttacgagcat tcccagcctc tttataatta
     5941 gctgctggaa ttttatccca aggaagcgca ttatcttcaa aactttcacc tgtttttgca
     6001 gcattaatga tttccgggaa tttaatatcc gcctcaaccc cttttagctg ggtacttcca
     6061 ccattgatac ggtagaattt ttgaatcgta tattggataa aaccaagagg ctcttgatcc
     6121 aaatcatata caaaattcaa tgaacggctc tgttgaacag ttcccttacc aaaggtttgt
     6181 tgccctacaa taattgcacg gttgtaatct tgcattgccg cagcgaagat ttcagaggct
     6241 gaagcactat ggcgattaat catcaccatc acttttccat cataaactga ttttgattct
     6301 ggatcttcgt gtactttgat acgattgaat gcgtcttgta cttgcactac aggcccatct
     6361 ttaataaata aaccagttaa ttcaatcact tcagttaacg aaccaccacc gttttcacgt
     6421 aaatcaatga tcaatccttc aacatttttt ttctctattt gagtaagtaa tttacgtaca
     6481 tctgaagtca aaccgatata aaaagtaggg atcttaatta cccctacatt ttttccatct
     6541 actttttcta ccgttaattt agcagcacta tcctcaatac gaactttatc acgcacaagg
     6601 gtaataattt tagtttttcc acctttttca ggctcaattt ctaaacgaac tttagtgcct
     6661 tttttacctt tgattttatc gactacatta tccaaacgcc aaccgataac atcttcaatc
     6721 tcacctctct caccttgacc tacaccgaca attttatcgc cgactaccag cttcttactt
     6781 ttagcggcag gggctcctgg cactaatgct ctaatgctgg ttacatcatc ttcttgggtt
     6841 agcgttgcac caattccttc tagcgacaga ttcatgctct cttggaacgc ttttgccgca
     6901 cgaggagaca aatagctagt gtggggatcg atctcacgag agaatgaatt taagtaagtt
     6961 tgtaaaatat catcagcctt aacttgagtt aaacgcttaa tcgcaaagtt ataacgttta
     7021 gtgagtgttt tcttaatttc aggccatttt ttatctttaa gatataaatt gataatatcg
     7081 tttttaactc gctgctccca aagtgtattt gcctcttcta cactttttgg aaatgcggcc
     7141 ttctcacggt caatctcaat ttcatcattc ccttttaagt caggctcttt atctagtaaa
     7201 gataaggcat agctataacg ctcataacga cgtttagaca ttaactcata cattgcaaat
     7261 gctgcatcta atttaccagc atataaatca tcatctaatg ttgtagcata tttactacgc
     7321 atttcatcaa tatcggcttg aagaaaagta ttatgagaag gatcaagcca atcgacatag
     7381 cggttaaaaa tcttccctgc aaactcatca ttcagttgaa atttatgata atgcgattga
     7441 gttaatcggg ctgttacacg cttggttgat aagctatgct gctcattagg ttttggcatc
     7501 acaatcgcac tttctttaat gtccggctga acggcaaaag cgtttcctat cattaaacct
     7561 agggctaggg caaaaatttt atttaatctt gttaatttca tcttcttttc caaataatca
     7621 agcggtcatt tttttgcaaa attttactaa aatccgaccg cttgtaagca caaagcgact
     7681 tgaaaactat ttacgaccga atttatctgc taatgcagct aatttttctt ctgaagcttt
     7741 aggtaaatta tctattgctt ttttcgcctt aaattctgca cgctttttcg cattttcttc
     7801 acgtgctttc tgtttgaagt actctttacg ttgtgcttta cgctcttgtg ctttacgttc
     7861 tgcaaccacc gctttcgcag cagccaaagc ttctgcggcg tgagtagctt cgtcttctgt
     7921 taccacgcca acttcttcac cctgtaagcc gacacgagca acattagctt ggctggcagc
     7981 caagtaacgc caagaattag tgtaattccg caatacttgg cgcaataacg ttttactgat
     8041 tttctcatca tcttttaatg cttcagctaa ttcctgaaac aacccaactt tcaatggttt
     8101 tacttcacct tcaagcgtga aacaaagcgg aaatttctcc gctaaataag caatcacttc
     8161 cttggtactt ggattggttt tattctgagt ttgttctact ttttgctcaa tttgctctga
     8221 cataataagt cctatttaat aaaaatctaa taattagata agtgaaaatc taactggata
     8281 ctatatttga tttataaggc ttcgtccata taaattccac attacgttta caaaagagat
     8341 agactctttt ttcatttgaa tgttcataaa agtataaaaa tgatttgctt aaaaaatgaa
     8401 taagtggtgt aatggctcaa gctgttcgtg cgttaattaa agttgaatct tgttagttat
     8461 tttcctcaag gcaagtgatt gatagatacg tctgtaatat cccgtttagc tatcttttat
     8521 cactttttgt atttatataa ggaaaatttt atgtcagcaa ttaccggcac agtaaaatgg
     8581 ttcaacgcca ccaaaggttt tggttttatc acccctgatc aaggtggcaa agatgtattc
     8641 gtacacttct ctgctatcga agcaaacggc ggctaccgca cattagaaga cggtgctaaa
     8701 gtacaatttg aaatccaaga ttcagagcgt ggagcttcag ccgtaaacgt gaaaacaatc
     8761 taatttcagc aaattcaatg aatttcgata aaaatgccga caacttgtcg gcatttttgc
     8821 tatcaattaa tctgtacttc aaaccttttc ggcacaataa aaatggcagg tagggtaaaa
     8881 attgccatca accaaaatgt caggcttggg gaatgttgat agaccattcc ggcaataaag
     8941 gtaaatactg ccataaaagc acagcttgcc aagccaaaat agagaccttg taatttcgtc
     9001 acacgctctg ccgattgcat cgaaatatag cgaatcatcg caatatgagc cgccccgaag
     9061 gtaatagaat gtagcatttg cattacaata atcagcacga tctctgtagt actacccatt
     9121 attgcccaac gaatcactgc aaaaacggca gctaaaatca ttaaatggct gattttccac
     9181 gatttaaaca agcgtttaga gaccaaaaag aacaaaattt ccgccaccac cgccaagccc
     9241 caaaacaggc tagtcattgc ggttgaaata ctggcatttg accaatgaat ggtgctgtaa
     9301 gtgtaataag cggcgtgcga ggctgaaatt aacgacaccg cgatcaacat ttttaaggtt
     9361 tccggctctt tcaataattg gcgataagtt acgcttgaag tattggcttt attaccttgt
     9421 tcttcaaacc cgactttggg cgtagcaagc tgccctattc ctaaaaaaac caagaaaccg
     9481 atgataatcc acaccaccga attttcacca agcaagccga taagatagcc ggcagaaagt
     9541 gagcctacca caaacgccat tgagccgaat aaccttgctc tgccgtaatc cagcccgatc
     9601 tgatgttgcc aaattgaggc aatgctatcg gctatcggca ttgcccccga attgaacatt
     9661 tgaaacaaca ttaacaccgg aaaaagtagc caaatgaaat cccctgaaaa cagcaacgcc
     9721 gccgcagccg caatattcag ccaagttaaa ctgcgggcgg tgggaatgag ttggctcacg
     9781 gtttttaccc gttgtgaggc aagcatactg ccggcaaagc ggaacaaata gccaacggcg
     9841 gcaaataagc cgatcatttc agtcgaatag ccgtgatgtt taagccacac tggcaaaaac
     9901 ggcaacaaca cgccataggc acaaaaaaag ccaaagtaat taaatgccgc ccattggaac
     9961 ggggaaactt tcatcataac gattgctcca tttctctggc tcgatgaatt gccgcccaca
    10021 ttgcatcatc aacggtttta gcaagatcgt gctgctcaaa cacctcaagg gctttcgccg
    10081 ttgtgcctcc ctttgaggtc acattttccc gcaaggtcga aagtggcgta gtcgggttcg
    10141 cttccaccaa tttcgccgcc cccaatgcga cagattgtac aagcgttctt gcgtcctgct
    10201 cggaaaagcc catttgcacc gcactttgct gcattgcctc cataaaacgg aagaaatacg
    10261 ccgggcttga gccggttatc gcaataatgt ggttgatttg ctcctcggtt tccacccagt
    10321 aacatttacc aacggctgac atcaactgtt cggcaaattg gcaagcggtc ggatttaccg
    10381 atttttttgc aaataatccg gtcattcctt cgctgattaa agacggggtg tttggcatcg
    10441 tgcgaatgat atttttcgca ctcggcaaca gcgtttccaa gcgttgcaca gaaatacctg
    10501 ctgctactga aatcacccat ttgttggaaa aatcaacatc ggcaaactcg gcacacactt
    10561 gtgccatcat ctgtggtttt accgccagca cgatcacgtc agcctgctct accgcctcac
    10621 gatttgcaaa atttgtcgca attccgaccg cttgtaactc ctctcggcga gccaaattac
    10681 ttttattgca cgcaatgatt tgttcggcag aataaccgct ttttaataag ccttgaataa
    10741 tcgcatacgc catatttccg gtgccgataa aggcaagttt tttctcgttc attcgcaaat
    10801 tctctactgt gttgggttga ggtctgttaa aataacacta ttctacaccc gataaaggat
    10861 atgcaaaaat ggtttggttc aaaaatgtga tgatctataa attaaccggc gagctggcgt
    10921 tggaaagcaa tagccttaac gagttacagc aagaaacccg ctttacccct tgcagccagc
    10981 acgatatgag caaattcggc tgggctacgc cacttaccgg ctcggattta ctgcatttct
    11041 cacaagcgaa ccaatttttg ctgatttcac acaaagaaga taaattatta cctgccaatg
    11101 tggtgaaagc cgaaaccgag caacgcattg cagaactgga agaaaaagag gctcgtaagc
    11161 tgaaaaaaac cgaaaaacaa gccgtgaaag atcaggtcgt ttctgcgtta ttgcctcgag
    11221 cattcagcaa acatcaattc accgctcttt ggttggattt agataatcag ttggtttatg
    11281 tggatgcagc ctcgagcaaa cgggcggaag atacgctggc gttactgcga aaaacacttg
    11341 gctcgttgcc ggttgtgccg atttccttta ccctaccgcc ggcagaggta atgacgaatt
    11401 ggatcgccaa agggcatacg ccaagttggt tgaatttgtt ggaagaggca gaactgaaat
    11461 ctttcgatac cgacagcatt attcgctgta aacgccaaga tttagagacg gaagaaatcg
    11521 cccggcactt gcaagcgggc aaatttatca caaaacttgc gattgaatgg gaagggcatt
    11581 tcaattgcgt gttaaatgaa gacgccacgc tttcacgcct gaagtttgcc gatgaagtgc
    11641 gagagaaaaa tgacgatatt ctcaaagaag atgtggctca acgctttgat gccgatttct
    11701 tattaatgac cgaagagctg aaacttttca ccgaaaaaat gattgccgaa tttggcggaa
    11761 ttaaatccag aatttagaaa aaaatttaag gaaagcaatg ttagatcaaa ccattatcga
    11821 ccaatatgac gccttgattt ttgatatgga cggcacatta attgacacga tgccaagcca
    11881 cgccaaggcg tgggaaaagg tgggcgaagt gttaggctac ccaatcaatc caaagccaat
    11941 gtacgaactg agtggctcaa ccacttttgt gattgcccga gaaataatgc aacgctccaa
    12001 tatccccgag cattattttg agcaagtggt acaactaaaa cgggaatttg ggattgaaat
    12061 ggtgttagcc aatgccactc tgttgcctgc ctttgagatt attaaagcta acgttggcaa
    12121 aaaaccaatg gcaatcggca caggctcaca ccgtgcaatg gtggaattat tagaccaaaa
    12181 atttaactta cgtcaatatg tttcggttat tgtagattct gatgatgtaa gcaaccataa
    12241 gccagcccct gaaacctttt taaaatgtgc ggaaaaactt ggcattgccc cacaccgctg
    12301 tttggtgttt gaagatgccg atttaggcgt gcaagccgcc ctcaacggca atatgaacgt
    12361 gtttgatgta cgtacgaata cgataactca ctcaacccgt taaaaatgat aggtttatat
    12421 gaaaacagaa tggattaaac atttaattca acaattaacc acgctttcca aagccatcga
    12481 aaactacttt accagcggtt catttggggt gaaattctac ccttttctaa tgcacccttg
    12541 ttttcgtaaa agctgtgcct ttttgatttt tattattgct atggtttcaa gttttagcgg
    12601 gctattttat ttggtggcgg aacacatcac gattttattt agcgaaagat cgctcaccac
    12661 ttacttccac catagcaccc ttgaattgat gattccagtc ggcacaatga tagatgaaaa
    12721 aatcagcgaa ttatcaccac tttcggtggt aatgcgttca atgtttgtgc tacaagcagt
    12781 cgtttttttc tttatttatg caatcggcat cacccacatt gctcacaaca aattgcgggt
    12841 catcggctta ttgctttcgc tatgctttgc gattggctgc tcactagttg ccggtattca
    12901 gccaagcagt cgtggcgaat tcggcattta caatttaggg gcaagcatta cgtttttaat
    12961 cggcaattta acgctgatca tcgcaggctt cgatctctac cacccttcaa tgcaattttt
    13021 taaacgcttt agcattggtg cgggcgttat cggggcaatc tgtattttaa tcacgatttt
    13081 cctaccaacc ctgtttagcc cgttaattga acgagcaggt atttatacca ttatgctgtg
    13141 ggaaatttta gccggttttg ccatcattaa acgcctgttg aaattgccct cattcagaca
    13201 acaaggataa ccaatgaaac agattccctt tattcaacgc tatgctcaac tgattgagct
    13261 accgaccatt tccagccttg ttgccgaaga agatttatcg aaccgccgtt tgattgaatt
    13321 gctcgccact tggctggcag atttcggctt taaaaccgag attttagcgg tagaaggcag
    13381 ccgtaataaa tacaatttac ttgcgaccta tggcgagggt gagggcggct tattattggc
    13441 agggcatacc gacaccgtgc cgtttgatga aggaaaatgg cgcttcaatc cattccaatt
    13501 aaccgaaaaa gcaggcaaac tctacggctt aggcacggca gatatgaaag gctttttcgc
    13561 ctttgtggtg gaggttgtga gccaactcga cctaacccaa atcaaaaagc cgattcgcat
    13621 tcttgccacc gctgatgaag aaaccacaat gctgggggca agaacctttg ctcagcacag
    13681 ccacattcgc cccgattgtg cgattattgg cgagccgacc tcgctcaaac cgattcgagc
    13741 ccacaaaggg catattggcg aatcggttcg cattaccggc agaagcggac actccagcga
    13801 ccccgccaaa ggcattaatg cgattgaatt aatgcaccaa tctatcggtt atttaatgaa
    13861 aatgcgtgat gaactgcgag agaaatacca caatccgctg ttccaagtca cccacccgac
    13921 aatgaacttc ggcaatattc acggcggcga tgccattaac cgcatttgtg cctgttgcga
    13981 attgcaattt gatatgcgac cactaccgaa tatggcggtg caagatttgt atgcaatggt
    14041 aaacgagcat ttaaaaccga tgctggaaca atatggcgat ttaattgaaa tccgccattt
    14101 acacgatgga attccgggct acgaatgcga acactcggca caaatcgtgc aagtggttga
    14161 aaagctactg ggcgaaaaat gcgatgccgt caattactgc accgaagccc cattcattca
    14221 acaactctgc ccaacgctgg tactaggccc cggctccatt gaacaagccc accagcccga
    14281 tgagtttttg gaaatgaaat atatcgaacc gacaaaagag ttattgacta aattgattta
    14341 tcatttttgt ggataaatca acagaaacaa gcgctcattt tcgccatact ttttgcaaaa
    14401 gaatcggcaa aaatgaccgc ttgatattta gtattgagtg acctataaac ttccatactt
    14461 catcattgat ttaaggagat tctgttagat aggtattaat ctctagctag gtcttggata
    14521 caaacggcga gaatgaatta tagtaataat atatactttt tctaggtgta tctcatagac
    14581 aatacgataa ttgcggcaga atgtttctaa tgtgccatct tctctacgtc gccctattgt
    14641 aggcataaat gcaatgagat cgagtttatt ttgtaattgt tcccaaagtg aaactgcgct
    14701 caaccaatgc cctgtataat cttctaccga ctgtaaaatc tcaatgacat tagaccttgc
    14761 ggtaagtgac agctcccaag atttaggcat aattaacctc aaacaaattt tcattttctc
    14821 gtaattgctg acgtttctgc atatccgcaa ataaatgatt taattcgtta ttgatttgtt
    14881 ctttggtaaa ggtttctcct cgagctattg cttcttgacc agctttaatt tgctctgcaa
    14941 gaaactcatc atatccttgt tctttgaata gcatattctg ctcctttgat ttgtgtcttg
    15001 attccactat gttcaagaca tagtttaagt ttaaatctac gctcaaagca atgaagagtc
    15061 aagggaatcc ttatgttgat agggtgtgca tatttttcga gtcaaatgaa ttaaaaatca
    15121 tcattacgat cacccactca tagattttat cttcctatct aaggtcatct tcttatatca
    15181 aacaagcggt ctaaatttgc aaaaaaatga caaatttaga ccgcttgtga gttacaaaaa
    15241 tataaactaa ttgagcttat caattactgc gcataactaa atactttcac cactttggtt
    15301 actccaccta cattgcgagc ggcttcggcg gcggcatcag cttggttttg gctgactttg
    15361 cccattaaaa acacttcgcc gttttcggtg acgactttca cttcggtggc ttttacctcg
    15421 ctatttacta acagtttgga tttcacttgg gtggtaatcc agctgtcttg tgtaatctgt
    15481 ccaaagccga ttttttcgcc ttggcggatt tcgttgtaaa tttccgtcac gccctccgcc
    15541 ccagcagcga ggtttttcgc attttccact acgtccatac ttggtgcttg cccgattaat
    15601 aacactttgc cgttgtaagc caccacgtta atgcgggctt cttgtttgat ttgctcgtct
    15661 ttattaatgt tgtaagcgac tttttcttct aaaatttcat catcaacttg cgtgccggtg
    15721 gtgcgtgggt ctgtcgccac tttagttgca accgccgcag aagtcaccac cgccgtggtg
    15781 atacaacctt gtaaagagat aaaacctaat actaataggc tgccctttaa tagtttattt
    15841 gctaatttgt tcataatctc tccttacgaa aatagtaaat ggtcgataag ttcacataat
    15901 aaattcacat aaaaatgatg gctttcaatc accctcagtt gattggttga aggggctgaa
    15961 atttcaatat cactttcatc taataagccg agtgtgtggt cgttattact gcctgttaaa
    16021 gcaataatat ctaaatctaa atgttgattt ttcgccgtat gaatagcttg caatatacat
    16081 tcttcattac ccacaggcga aaaaacaatg aagagatcac cctcttttgc aaccgcctgc
    16141 aactgttttt tataaacagc ctctaactcg ttatcttgtg ccacaactcc tgccaataca
    16201 ccgcttaatt gcagttgtac ggcagcaaaa ctcggtcttg ccagttcata acggtgaagt
    16261 aagtggctga ccaataattc ggcattaccg taagagcgac cgtgtccgca gacgataact
    16321 ttatcgccac gcaacaaaca ggcaacaatg cggtttgccg cttcacttaa tttagccggc
    16381 aatagctcag aggcggaaat ttgggtttga atactttcgg taaatctatc ttggatttta
    16441 tttaacattc tttctaacct aaaaagttgg gaatccacac aggcgtttgg tttccttcaa
    16501 aagcaaccac atcaaaacgg caatttgcag tttctaaact ttggttttgt ttaagcaacc
    16561 acatattagc ggcattttgc catttttgtt gcttgcggta atcaatactc tcaacggctg
    16621 aaccgaagcg gttgctttta cgctggcgaa cttctacaaa cacaacggtt tgtccgtctt
    16681 gcataatcgg atccagttcg ccacctttaa atgcttggtt agcggcaaca aaacgaagcc
    16741 cttgctgttc taaaaacact cgggcttttt gttcataaaa cgagccttgt tcccgtttat
    16801 taataagctt gttgaatagc tccattgcga tattgcatcc aagataaact acgttcaata
    16861 ttacaatgtt gtccggcttt taactcaccg gttaaacctg aaattttgta gcccggaata
    16921 tggcggaatt cattgaattt ggttgccaat gaccacgcat cagcccccat tgcgtataaa
    16981 cgcatcattg agaaatcgct attggctaaa ttctcggctt ttttatattc actagaactt
    17041 tgatcagcta acagtggcac ttcactaaat tttacccctt ccattgaagt gtaaaaatca
    17101 atgccgttat ttggcgaatt actgcgagat gaggtataga tcgctaaacg atcttttaag
    17161 gttgagctat caataccttg tttaatttct aatacttgct cggcattccc caaaatatat
    17221 aaagctgctt tgctcacacc tgcattttga atagcggcaa cggcatcaag cggttggttg
    17281 tagtaacgca catcagcatc gctattggta agctgacgcc agcgtttggc aaaggcttct
    17341 gccgagcggt tgccgtagtc atcttgaggg gccgcaacga tagcgacact attaccgtct
    17401 tgataaattt tttccgcccc tgattgtgcc tcagattcag gagataaacc gtagtaacac
    17461 acctgagcaa tattacgcac attttcagtg gcattcagtg ccaaaatatt cacgttttgg
    17521 atttctgggc taagtagcat ttcatcaaca cgagatttga gcaatggccc gacaatcaca
    17581 tttgcccctt gctgttttgc ctgtgaaatt aaggaattaa catcagatga atcggtatca
    17641 aaagtttgca ctgcggttga gtcatcagcc ttagcatcat taaaaccacg cttgataata
    17701 tcacccaaaa tttttgcatc accacttaga ggcaatagca atgcgacact gtttaactgg
    17761 gtttgttgga aattactcac cccttgtaat tccgttggca ttacggcaac cgcactatgg
    17821 ctcgggtatt gggctttcca attattaatt gcttgtggca tttgtgccgg tgtcgtcaca
    17881 ttttgattat agatattaat taatgccaac caaccagcaa gctccatctc acccgcttca
    17941 ggcacagttt tttccagcat tcctcgattt gcatcacgca aggtttgcca aataatatcg
    18001 ttattttctt ggcgttcacg gttcatttta tagaaattgt taagttgcga tcttgcacgc
    18061 acaatgccaa tcacatcttt ctgattggca gcaatacggg cttgggtttg aatataacgc
    18121 aaacgctgtg ccgaacttaa tagcggatct tgaatggctt ttaattggct tgttgcttgc
    18181 tcgtttttcc cttgtaaggc ggcaagctgg gcggaaacca aggcatactc taacttttgc
    18241 acctcgttca tctctgcggt cagaatttca ctaaaggtat tttgagcctc atattcctta
    18301 ttttcatcaa ttaatttgcg tacagctaaa agttgatacg aaattttatc ttccgcttct
    18361 ttggtttgat ctgctttatt aatatagaat tccgagcttg aataggcttc atttttaatg
    18421 gattcggtga caggatttac cgatgtacag gcagaaatga ataatgcaat cgccgttggc
    18481 accaatgcct ttttcattgt atggtttaaa atagttgcca ttgtcagatc ctcaatagaa
    18541 tataatgtgc taaatttaat gtgaaatctt acttatcaaa cgagctaaaa gcaaatgaaa
    18601 aacagacaaa attcatctgg aatcaaccca aattacggaa ttttatatat tgttgccacg
    18661 cctatcggca atttaggcga tattacccaa cgggcgttag acaccctttc atctgtcgat
    18721 ttagtcgccg ccgaagacac tcgccacagc ggtttattgc tgagccacta cggcattaaa
    18781 aaaccgtttt tcgccttgca cgaccataat gaacagcaga aagcggtcgt tttagtcgaa
    18841 aaattagcaa aaggggaaaa cattgcgtta atttccgatg ccggaacgcc actgattagc
    18901 gacccgggct ttcatcttgt ccgtcattgc cgccaagccg gggtaaaagt tgtgccgatc
    18961 cccggggctt gtgccgctgt tactgcctta tgtgcttcag gcatagcttc agaccgtttt
    19021 tgttttgaag ggttcttacc ggcaaaaaca aaatcccgtt gcgataaact taccgagctt
    19081 gaaaacgagc ctcgcacact gattttttat gaatccaccc accgtatttt agacactctt
    19141 gccgatatgc agactgtttt tggcgaagat cgctatgtgg taatggcgcg tgaaatcacg
    19201 aaaacgtggg aaaccattta tggagatcaa ctgggtaact taattgaatg gctaaatgag
    19261 gatagcaacc gaattaaagg cgaaattgtt ctggtggttg aaggtaaacc gcaaagtagt
    19321 gaggaagcct tttccagcca agcgatcaaa ttactgacat tactctgcca agaacttccg
    19381 cttaaaaaag ccgctgccat tgtggcagaa accttcggct ataagaaaaa tgccctgtat
    19441 caatatggat tggagcattt tgagtaacag acaagcggtc agattttgtg agttttttgc
    19501 agattggcac tcccctctct ctgaaaaatg tttctgaacg aaacatttcc cggtctcaat
    19561 actcgctacg ctcgctcctt cggagccgtt ggcaaagcca acgttcaaat gtaaacattt
    19621 gtcccataag gggagagagc taaattattc gcttgtcgac ccctctccac tcgtgggaga
    19681 gggacagatt cttcttcgtt cagaagaaaa atcagggaga gggggaagtt tctcgcacta
    19741 aattccgata agcatatgcc ataatcgcaa acatcaacag caagtaaagc ggtaataatt
    19801 gaatgctgat agcattagca ataaagccga aaatcggtgg caataacagg acgccgatat
    19861 aggcacttgc catttgcacg ccgatcaccg attgagactt gtcctcgccg aaaaacgcag
    19921 gggtcgaatg aattaagcac gggaaaatcg gggcacaacc tagcccgata ataattaaac
    19981 ttgccagcgt aacatatttg cctaacggca agcacagtat cgcaatgccg actaagatca
    20041 aggctgaacc aagtttaatc atttgtctgt tgctaaattt aagcgtcaag aagccactta
    20101 cgcctctgcc aacggtaatg ccgataaaga aaatactgcc gaacgcagcc gcttgttcta
    20161 agccgacatc tttaaccatt acaaaatagc tactcgccca cagtccggcg gtttgttcta
    20221 cgccacaata gccaaaaaaa gctaaaatgc catatttcac gcccggaatt tttagcgttt
    20281 cttttaagct catcggtttt gccgaatggt tgatttcagc ggtaatctgc ttgcgtaatt
    20341 tccaaaaagg cagtgagcaa aacagcatta gcgttagccc gatttgtaac attgaaatgg
    20401 tgaaatagcc tgcctcccag cctcgccctt gcaataaggc gtagcctaaa atgtgcggcc
    20461 cgatagaagc tccaacgccc cacatacaat gcagccagct catatggcgg cttgcgtagt
    20521 gaactgctac atagttattc aacgccgcat caaccgctcc agcccctaag ccgtaaggaa
    20581 ttgcccataa acataagatc cagaaagcat cactgattga aaagccccac aatgctaaag
    20641 ccgttaaggc aacgctgatg accattactt tgcctgtgcc gagatggtag gtcagtttgt
    20701 ccgacattaa gctagaggta atagtgccaa tcgacataat catcgagacc acaccggcat
    20761 aggaaagcgg aacagcaagc tgttggtgca ttgacggcca cgccgagcct aaaattgcat
    20821 caggcaaccc aaggctgata aaagagagat aaataatagc gagtaggagg ttagtcatag
    20881 cttacaatcg gtcacaaaaa gcatcgcttt ttgaacgttg gctctgccaa cgggagcgaa
    20941 gctgtgaaca atccttacaa ggattgtgaa taatttttga taaatttttt gtaaaaaaat
    21001 ggcttaagga gaccttaagc caaattttat tatttcactt ctgccaaata ggccttatta
    21061 gcacggtcaa aggtgtctaa tacggctttg cttggcattg gcgtgataag tgataccaca
    21121 atgatcatta gggtagcagc aataaagccc gggatcatcg agtaaatttc cggtaaggcg
    21181 agcttaagtg taatatcgcc ccaaaaatgc acgattaacg caccggtcag cattccggca
    21241 atcgccccaa aaccgttcat acgtttccag aatagtgaaa gcaataccac aggcccaaat
    21301 gccgagccga aacctgccca cgcattacgc actaagccaa atactttgct gtccgggtct
    21361 tgggcaatat aaatagctaa tgctgccacc gcaagcacca tcaagcggct taaccaaacc
    21421 agttctttat cggaggcttg agggcgtaaa atgcctttgt ataaatcttc ggtaatcgca
    21481 cttgaacaaa tcagtaattg agcggaaagg gtactcatta ccgcagcaag aatggcagat
    21541 aataaaatgc cggctaccca agggttaaat aacaatttag ctaattcaat gaaaatttgt
    21601 tccggatttt tgctgatatt gccgacttgc tccgggttgc caaagaaata tgccatacca
    21661 aaataaccaa tgcctattgc ccccagtaag cagataatca tccaagtcat actgatacgg
    21721 cgtgcatttt caagagactt cacactttct gccgccataa aacgcaccac aatatgcggt
    21781 tgtccgaaat aacccagccc ccacgccatt aagctgataa tgcctaatac gctggtgccg
    21841 gtgaaaatgt cgttgtagtc tttttgtgcc atctcgcctg cacggtcgat taaggcttgc
    21901 atttcatcaa aaccacctaa gttatacatc acaaaaaacg gggtgagaat cagggcaaaa
    21961 accattaatg aagcttgaat agtatccgtc caacttactg ctaagaaacc accaataaag
    22021 gtgtaaagaa tggtagcaac agccccatac caaattgctt ggtggtaagg taagccaaat
    22081 aagttttcaa ataccctcgc accggccaca acgcctgatg cacagtaaat tgcaaaaaag
    22141 agtaaaaaaa tgaccgctga taaaatctta attaaacggg ttttatcgcc aaaacggtta
    22201 tgaaaatatt cgggtaaggt taaggcatcg ccactgtgtt ctgtatgcga gcgtaatctg
    22261 cctgcgacta atttccagtt tagataagca ccgatagtta aaccgattgc gatccagcct
    22321 tcgatcaaac cgcctgcata aacggctccg ggtaatccca tcagcaacca gccggacata
    22381 tctgatgcac cggcagaaag tgcggtcaca aagctaccta aacggcgacc gcctaaaata
    22441 tagtctgaaa ggttattggt aacacgatag gcaataaagc cgatggcaat cattcctaga
    22501 atatagacaa caaacataat tgttgttgga tcaagaccaa acattattaa tgaatcctca
    22561 agatttctta ttgtataaag attaaagtga gtaaagggta aaagattacc tgaaataatc
    22621 aaaatggcaa cacaaaatta ccgtccgccc agctcagctg aaattttttc tgctgtttct
    22681 tgaatagccg gtagtagatt ttcccgcccc agctgattta aacgagcagt tgaaagcgaa
    22741 acagaaatcg cataatggac tttttgttgg tgatcaaaaa tcgggcaagc aatacaagaa
    22801 acccctaatt cattttcttc gttatccatt gcaaaacctt gacggcgaat ggtttccagc
    22861 tcggtttgca ttccgtcaat cgtggtgatg gtattgaccg tcagtttttg aatgatgtcc
    22921 gatttagtct gccaatattg tggaatgtaa tctgccgaac cataagcaag aaacagtttt
    22981 cccattcccg agcaatagag ttgcatttgt tgcccgatat aggctcgggt acgcatcatt
    23041 ccggtggtag cttctaattt attgattaaa atagcgtgat cgttttcccg catcgcaaaa
    23101 tttaccgtct cgcctaaggt taaatttagg gcttctaaat gtggggcggc aatatgcaaa
    23161 atgttaatcg aacttaaggc tcgctgcccg attgccaaac atttggtggt taaacgataa
    23221 ctgcccgcag tcggtgcagg gcggacgtag ccctcttgtt gtaagccttg tagcagacgg
    23281 tgaaccgtgc ttttgttcag ccccgaaagc tcggctaaat gggcaagcgg acagccgttt
    23341 gggaatttcg ctaacaattc caatagtgtt aagccacgaa ttaaactttg atttccactc
    23401 gattcctttt ctttctttgc attcatttgg ctgctcccaa aataatatga tctaacggca
    23461 tatcccaact ctcaatcggt aattgttcga cttgctgaca ttcgtgtgcc aaaccgacac
    23521 taatcagatg aggtgcttga gcaagggttc tatcataaaa gccacctccc attcccagcc
    23581 gatttccggc tttatcacaa gcaacaagtg gggtaaaaat catctctaat tcttgcaacg
    23641 gaaggatatt tctaacatct aatatcggct cttgaatccc caagcggtta aattttagaa
    23701 tagttttgca attgtaattt acaaacaata attgaccgct tgtaaaaggg tgcaacagcg
    23761 gcagatacag ctttttgccc tgttgaagta attgttccat taaaggaata ggagaaattt
    23821 caccgttaaa aggcaaataa aaggcaatat gtgagacttg gtaagattca atcaatgaaa
    23881 gagcttgagg aataatggat tcggctgctt gagtttgctg accggcagtt aaactttgcc
    23941 gtttaagccg cattgattgc cgtaattggc tacgaagatc ggttaaagat gattgattca
    24001 tataaagacc cgagatgccg ctaccagtaa tggtccttga accagtcggt tcaagggagt
    24061 caaacttaac tgcttttagg cttcttactc ctaattaaat tagggtaagc ttgctcacca
    24121 gcgttagatg tccaactcaa agtttcaaat tatcggctca gggacgtaac tcgtaacgca
    24181 caccccaggc aagacttata gtaacggaat ttgatgattt ttcctagtat ttaatcccac
    24241 aaaatgcaaa ttctcaatct ttttggctct attcctaatc aattcgatta aaaattacct
    24301 aattggattg aaatttgcca agcgaattat ctaactgctc aatacaagcc accaacacat
    24361 ttttattttc tgcattttgg cgttgggctt gctccagttc ataatttaaa ttcagtgcca
    24421 caatcgctaa cactttttca agctgaataa tgccggactg ctctttcaat accaccacac
    24481 gctcttccaa acgctgtgct gaagccagta aatgctcttg ctgttcaaca gggcattgca
    24541 agcgtaaaac ctgcccaaaa atctgtagtt cgatattatt tgccgacata aatacgaaat
    24601 cctcacttaa tcgcaaaatt tttgctatat tatgccattc tttagcaaaa tcacaaataa
    24661 tcccattatg gctatcacag attcccaaca atttaaacaa ctggtatcac aattacaaat
    24721 tgatgataca ccggcagagt ttcacggttt tttatgcggt ttaattgccg gcggtattca
    24781 agatgagtct tggaaaaccc tcacctacca atttaccaat gacggacacg cattttccat
    24841 cgagccgtta aacactttaa ccgattttta tcagcaatta agtgaaagct tttcagaagc
    24901 caacacgctg tttagccttt ggttgccaca aaacgaagaa gatggttttg ccttagctga
    24961 tggtatctcc gaatggacaa acagtttctt acttggactt ggcgttgctc aacctaaatt
    25021 acaacaagaa accgatgagg ttggcgaggc aatcgatgat ttagatgaaa tcgccaaact
    25081 aggctacagt gacgatgata ataacgagga actactggag gctggcgaag aagtgttgga
    25141 atatctgcga gttttagcct tattcttgca cagccatttt gctttaggcg tgccgaaaac
    25201 cgaagaaaag ccaccattac actaatgaat aaatacaagc ggttcaattt catctctatt
    25261 ttgcaaatat attatgcggg gcgaaaaata tttcgcccct accaaaatca aaggaaaaac
    25321 caatgtcaga attaaaaaac gatcgctatt taaaagcgtt attgcgtgaa cctgtggata
    25381 tgaccccggt ctggatgatg cgtcaagccg ggcgttattt gccggaatat aaagccaccc
    25441 gagcagaagc cggcgatttt atgtcactct gccgtaacgc tgatttagcg tgtgaagtca
    25501 ccttacaacc gctacgccgt tatgaactcg atgcagctat cctattttcc gatattttaa
    25561 ctgtgcctga tgcaatggga ttaggtttaa gttttggtgc aggtgaaggc cctaaatttg
    25621 cccgcccggt ggcaagcctc aatgatgtca atcagctacc gattcctgat ccggaagacg
    25681 agttgcaata tgtaatgaat gcggtgcgta ccattcgccg agaattgaaa ggcgaagtgc
    25741 cactaattgg tttttctggc agcccttgga cactcgccac ctatatggtg gaaggtggtt
    25801 caagcaaagc atttaccaaa atcaaaaaaa tgctttacgc tgagcctcac attctacaca
    25861 aattgctgga caagttagct gacagtgtca tcttatactt aaatgcccaa atcaaagccg
    25921 gtgctcaagc ggtgatggta ttcgacactt ggggcggtgt attggctcac gaggattaca
    25981 aagccttctc attacactat atgcacaaaa ttgtggacgg cttaattcga gaaaatgaag
    26041 gacgtaaagt gcctgttacc ctattcacca aaggcggagg cttatggtta gaagcgattg
    26101 cagaaacggg ctgcgatgcc gttgggctag attggacagt cgatattgcc gatgctcgcc
    26161 gccgtattgg cgacaaagtt gcgttgcaag gcaatatgga tccaagcgtg ctgtatgcaa
    26221 gccctgaacg aatcgaacaa gaagtaaaaa acattcttgc cggcttcggc aacggcagcg
    26281 gacacgtctt taatcttgga cacggcattc atttagatgt gccggtggaa agcccgaaag
    26341 tgtttgttga tgcgattcac aactactcga agcagtatca taaataatgg ataaaatgcc
    26401 ctctctcctt gtgggagagg gacagatttt tctttgttca gaagaaaaat cagggagagg
    26461 ggcaagcggt catttttata cagaattttg caaaatcgtt cccttctctc tgaaaaataa
    26521 agaaggaaat acaatgagaa acccgattca taaacgcatg gaacgtttcg agccttggca
    26581 aaacaccaca tttatggcgt gcctatgcga aagaatgtac cccaactatc agcttttttg
    26641 tgaagtaacc gaacagcctg aaaaagctaa ggtattccaa aatattttaa atttagtctg
    26701 ggaatattta accataaaag gggcaaaaat taatttcgat aaccaactgg aaaaattaga
    26761 agaaatcatt cctgatgtga acgaatatgc gttttttggt gtcttacctg cacaggaagc
    26821 ttgcgaagcc ctttctgaac ttcttcacag tattatcgct ggttcaaccc ttgaacaagc
    26881 aatccgcatc agccaaattt cattaggcac agttgccagc tatttggaaa tgcaacaaga
    26941 taaagaactg aacgagcaag agctaaagaa ttctgaagaa attcaagaag aactggacgt
    27001 acagtggcaa atataccgct tgctaaacga atgtgaaaaa cgtgatcttg atctcatttt
    27061 tgaacttaaa gatgaaatca gaagcagcgg gattagtaat atcgggttaa atattaacca
    27121 atagcattga tatttgcaaa atcttgctta ataatacttt gagaaatctt aactttgaat
    27181 taagctatcg caaggtttca ataacttctc agacgtttta cgtcatttat taaaaacaca
    27241 tatcttagag gataaaacta tgaacaaaac tgagttaatc gatgctatcg ccgctggtgc
    27301 aaacttaacc aagaaagatg ctaaagcagc attagaagca actcttgatg caatctctgc
    27361 aagcttaaaa gcaggcgacg ctgttcaatt aatcggcttc ggtactttta aagtaaatga
    27421 gcgtaaagca cgtactggtc gtaacccaaa aactggtgaa gagatcaaaa ttgcagcagc
    27481 taaagtacct gcattcgttt caggtaaagc attaaaagat ttagtaaaat aattctttaa
    27541 agatataaaa ataaagcctg gattataatc caggctttat ttttagcgtg tttcgatagc
    27601 tacagagaaa ctaaaaagca ctatttgctt tcaatcgctt ttttcatttc ttcaactttt
    27661 gtttctgtct caactttcac ttctgctgcc ttctcagcta ctgccttttt agcttcttct
    27721 gctttatctg ctgttgcttg agtcgcatca cttgctgctg cttttagttc ttccacttta
    27781 gcttcagttg tggcttttaa ctcagcagct ttctctgcta ctgccttttt tgcctcttct
    27841 gttttatctg ttgttgcttg agctgcatca tttgctgctg cttttagttc ttccacttta
    27901 gcttcagttg tggtttttaa ctcagtggct ttctctgcca ctgccttttt tgcctcttct
    27961 gttttatctg ctgttgcttg agctgcatca tttgctgccg ctttcaactc ttcaaccttc
    28021 gcttcagtag ccgatttaac ttctgcagct ttttcagcta cagcttcttt tacttcaacc
    28081 gctttgtctg tagttgattg cgcggcttct tttgcctgat cacaagcagc aagtgccata
    28141 gttgtaccta acactaataa tgataaaaat gattttttca taccgagttc cttaaataaa
    28201 ctaaaaataa cgcactttgt aataaagtgc gtttacttag gcagaaaaat tgatagaaag
    28261 ttcatacttt gataaaaaaa tgcctattag ttataactaa taggcattta aaccaattaa
    28321 ttgtacttaa ccattggttg aacgaggcgc tgactgcact tggctcactg cgctggtata
    28381 tccgccaaac cctttgccat agaaatagta tttagagttt tgccattggc taatttcgac
    28441 tacttcaagc ttgtcacttg gtgcagaagc aatggtcata gcggcttggg tatgctcaac
    28501 acgagagaat gtacctaatc tgccgttaaa tcgataatcg ctttcgtaag ttgattttgg
    28561 cacttcaatc gggttagtaa cctcttccac aatcgctggt gcaaccgttg cttgcgattg
    28621 gaatttactg actcgctcat ttttctcttt aactaaatca cgttcagaat gctgagcaac
    28681 aacactacca aatggagcaa tatgctcttt tacctctact ggttttacgt cttcagaagc
    28741 aactttttct tctttcggtt tggaaagctg ttcttgcttc tccttaacca aatcacggtt
    28801 agttgcttgt gctacaaagc cacctagcgg actaactgta tgaagcttct tctcttctga
    28861 ttttttctct gtctcaacaa gctgattttc ttgctgttca agcatttgat caacagataa
    28921 gaatgatgct ttttcctcta ctttgacagt agaggtaacc tgaacccaaa ctttaccgct
    28981 cgcaagctca ggcgaagcaa cagctgaagt tagaggcata ggagaaataa cctgattgcg
    29041 ttgattttca cgacgacgct gattgcccac acgcaaatgg cgaggtaaac ggcgttggcg
    29101 gttattttca cgtccttcgt tcgttgtttc tacctcagga gctgtttcaa caggtacttc
    29161 ttgggttgca agcggttgaa tttgttgatt tttttgcaca ttttcaactt gttttgccac
    29221 cgtttcctca acagcaggtg ttagattttc cacttctact tcttgtgttt cgatacgcac
    29281 ttttttacgt agatcacggc gttggcgacg ttcagtttga acctcacggg agttgctacg
    29341 actctcttgc tcggttacac cggaaacttc ttccactacc gctcggcgtg cttttttctc
    29401 gctacgcatc ggtttttctt ccgctggagt agtttgagct tgcggagttt tacgctcttg
    29461 attttccgct ttagcattac ggttcgggcg ttcacggcgt tggcgacgct cacgctgatt
    29521 gcgtgctttc ggcttcggtt tttcttccac tttttcttca ctaaaccagc ctttaatggt
    29581 cgcaattaag cggcttaaca gcgatggttt tggtggttcg gttggtgttg gcgaaggttg
    29641 gagattcagc tccgagcttt gtaacactga ctctaccgta atcaccggct cgttacgggt
    29701 aaccagcaca tcttcttgat ggtgatgatg tgggtgttct tcttcatgac gagcttcgta
    29761 atgcttggtt aaatcgtagc ttaacgttgg agtaatttca ttttcacgca ggcgatatac
    29821 gctgaaatgc ggcgtttcca tactttcaga cggtactaca acaatttgta catcgtggcg
    29881 tttttcaatg ctggaaatcg ctttacgttt ttcgttgagt aagtagctgg cgatttgcac
    29941 cggcacaatg gtgtgaacct gtgcagtgtt ttctttgatt gcctcttctt ctaataaacg
    30001 taagattgac agtgcgattg attcattatc acgtacttta ccagttccct gacagcgagg
    30061 gcagatatgc gatgaagcct cacttaatga tgggcttaaa cgctgacggc tcatttctaa
    30121 caaaccgaaa cgggaaatac gggcaaattg gattctcgca cggtcttggc gtgtcgcctc
    30181 acgaatacgg ttttctactt cacgttggtg gcgaaccggt gtcatatcga taaagtcgat
    30241 cacaatcaaa ccacctaagt cacgcaaacg taactgacgg gcaatttcat ctgccgcttc
    30301 taagttggtg ttaagagcgg tttcttcaat atcgccgcca cgggttgaac gtgaggagtt
    30361 aatatcaatt gctgttaagg cttctgttac atcaataacg atagagccac cggaaggtaa
    30421 acgcacttca cgttggaatg ccgattcgat ttgcgattca atttgatagt ggctgaatag
    30481 tggtacttcg ccttcgtata atttcacacg gttgatgaaa tccgggcgaa caaggcgaat
    30541 gtggtttttg gctttctcga acactttttt gttgtcgatt aagatttcgc caatatcacg
    30601 gcgtagatag tcacgaattg cacgcacaat cacgtcactt tcttggtgaa ttaagaacgg
    30661 agctgggcga gattccgccg cttttttaat cgcttcccag tggtgtaaca agacttttaa
    30721 gtcccattgt aactcttccg gcgatttgcc gacaccggcg gtacgaacga ttaagcccac
    30781 gtcttccggt acatctaagc agtctaaagc ctctttgagt tctaaacgct catcaccttc
    30841 aatacggcgg gaaataccac cggcacgagg gttgttcggc attaagacta agtaactgcc
    30901 cgcaagcgaa ataaaggtgg ttaaggctgc tcctttgtta ccacgctctt ctttgctgac
    30961 ttgaacaatc acttcttgcc cttcttgaat aatatctttg atattcgggc gaccgttaaa
    31021 cacatagtct gacgggaagt attctcggga aatttctttt aaaggtagga agccgtggcg
    31081 ttctgcaccg taatctacga atgcagcttc aaggcttggt tcgacacggg taattttacc
    31141 cttgtagata ttggattttt tctgttcgtg acccgggctt tcaatgtcca agtcaaataa
    31201 gcgttgccca tcaacgaggg caacacgcaa ctcttctttt tgagttgcat tgattaacat
    31261 tcttttcatt gtgttttctc attattttgt ttttgtctta cacggtcatt ttgacccatt
    31321 aataagggaa tggatttaat gtctatctca cgactgtctt cattcccgat agtgcattga
    31381 tggttgtctt acgtttactt tgtcttgtct taaagaaact gcaaaatcaa tcacttaagg
    31441 cttgtttatc tctattacaa gcggttattt ttgctttatt ttttgcaatt ttctattgct
    31501 ttttcaagcc aaaaataacg agtcattatc gcattttaac cctgaaaaag gcaaggtaat
    31561 tgttgtatgg tagctgttat ttgttgtgga gatgaatata atgaaaatga atggggtgat
    31621 aaggaaaaat aatgagattt agtgtgagtg ctggagataa gcgtgaaatc caagcggtta
    31681 aatttgcaaa aaaagagcta aatttaaccg cttgtaaagc gaatattatg cttttgccgt
    31741 catttttttc actgcttctt cagtggtcca gaggtcattt gcgataatac ggtagttggt
    31801 taatgctgca aggtagccgt caccttcagg aatacgaggc cctgcggttg catctttcac
    31861 cactgttact tcaaaacctt gttcgattaa ttcacgcaag tgtgaatcaa tacataagtt
    31921 ggcagccata ccggctaaaa ttacttggtc gattttacgt ttgcgtaatt gcaacactaa
    31981 gtcattggtt tccggtccaa agattttgtg tggagaggta atcactgttt tgccatcaaa
    32041 aatgtatggt ttgtactcag gcataaagtc tgcacctgaa ttttcaaagc cttccatggt
    32101 gtattgacct tttctcgcaa acattccgct gtcgtgcata aagtgttcac ccggtgaacc
    32161 aaattcccat ttgtgatcag tcgggtaata gtagtgtggc gaaacaaagg ttggcatatc
    32221 gactgctttt gctgctttaa ataagctttc aatgttagct acagtgttgt tttctttaat
    32281 tgagtcacct aacacgcccc acatcacgcc tttcgggcct aggaagtcaa tttgtggatc
    32341 aactaccact aatgccacac gttttggatc aatggtcatt ccatggcgtt ttaaaccgta
    32401 ttgttccggc tcggcataag gtgatttttc tgcactggct tgttttgcat ttgctgttga
    32461 tgcaatacct aatgcaccta atacactggc tgccattgca atacgagagc cgtggttaag
    32521 ggcttgacgg cgttcttggt tgatttcttc aaattgttcc tgtgacatca ttttatcctc
    32581 attaatagat atacaaattg taatgataac ttgcgttacc gaacgggttg ctattatagt
    32641 gatcgcattt ctcctgtttt aaccgttcgt ctcaattctt tacccaagga gcttaatgtg
    32701 gatagtttga ctcatctttt tacccaattt cagtttcgca cggatttatt tcatctaggt
    32761 cagttatgcc aaatcgggag ttttaatgaa gagaataaag gctatttaca tttcgttcgt
    32821 cagggacgtt ttattttaaa tcaggctgcc gaacgcccga ttacgattga acgcccagcg
    32881 attatttttt caccaaccaa tattttgcat agtttgcacc cgttagatga tagtgggtta
    32941 gatatatttt gtattaattt tgattttggc aaagggattc gcaacccatt aactcatacc
    33001 ttgcacaata ttgtgatctt agagttggca cagtatccgg aattgggggt attagccgat
    33061 caaattttta gtgaagtgaa tcagaaaggg tgtggttatc aggcaatgat tcatcattta
    33121 tgtgcctatt ttaccttgaa agttgcccgc caatgtttgg aaaaagggta tattcaaaca
    33181 ggtttgttaa aaggcttggc agataagcaa ctggggaaag tgctgttagc tattcacaat
    33241 gcaccagagc gagattggaa tgtagaggag ttggcaaatg tggcattaat gtctcgctca
    33301 cgctttgctg cttattttaa acaaacgatg ggggtttcac cgatggatta tctcactaac
    33361 tggcgactag cggttgccca gcatttatta caaaaaggga taccagtagc attggtggca
    33421 gagcaagtcg gttatagcca taatgctgct ctcagccgtg tctttatgcg ggaattaggg
    33481 ctttcgccta ccgagtggct ggctcaaaat aaagagtcgt aacctgatga gaaacaaata
    33541 gccgaatggt aaaaatgtca aaaaatttaa ccgcttgtta tgttgcacaa gcggttaaat
    33601 gttgccttaa atgccaagag aatcccaaat ctcatcaatg cgtttcacca cattgtcatc
    33661 tttttcgatg ggtgttcccc attctcgggt ggtttcaccc gcccatttat tggtggcatc
    33721 aatccccatt tttgagccta accctgcaat tggcgaggca aaatcgagat aatctatcgg
    33781 cgtgtgttca atcagtgtcg tatctcgagc cgggtcacaa cgggtggtga tcgcccaaat
    33841 tacatctttc caatctcgag cgttcacatc gtcatcgcac acaatcacaa acttggtgta
    33901 cataaattga cgcaggaacg accaaactcc catcatcacc cgtttagcgt gtccggcata
    33961 ttgttttttc atcgtcacta ccgctaaacg gtaagaacag ccttcaggtg gcaagtagaa
    34021 atcgacaatt tccggaaact gtttttgcaa aatcggaata aagacttcat tcaatgcttc
    34081 acctaatact gccggttcat caggtggtct gccagtgtag gtagaatgat aaatcgcatc
    34141 ttttcgcatc gtaatatggg taacggtaaa taccggaaaa tactcttgct cgttgtagta
    34201 gccggtgtgg tcgccataag ggccttccaa tgcggtttct tccagatcga tatagccctc
    34261 cagcacaatt tcgctacttg ccggcacttc taactcattg gaaatagatt tgaccacttc
    34321 ggttttatgc cctcgcaaca gccctgcgaa cgcatattcc gaaagcgtat ccggcacagg
    34381 ggtgactgcc gctaaaatag tggctggatc tgcaccaatc gcaaccgaca ccagaaacgg
    34441 tttacccggg ttttcggctt tccactcttg gaagtctaac gcaccgccac ggtgggaaag
    34501 ccaacgcata atcagtttgt ttttgccgat aagttgctga cgataaatgc ctaaattctg
    34561 gcgttttttg taaggccctt gcgtaatcgt cagcccccaa gtgaccagtg gagcgacatc
    34621 gcccggccaa cagtgcataa tcggtaattt gtagagatca acctcatcac ccgaaatcac
    34681 cacttgctga caatcggctt tgctcagtac cttaggcggc atatttaaaa tttgcttcca
    34741 ttgtggcagt tgcccgatca aatctttaaa ccctttcggt ggttcaggct cttttaaaaa
    34801 ggcaagtaac ttgcccagct cacgcagagc tttggtatct tcttgcccca ttcccagagc
    34861 tacccgtttg ggcgtgccga ataaattaca caacaccgac atttgatagc ctttcgggtt
    34921 ttcaaacagt aatgccggcc cgcctttgcg taaggtgcgg tcggcgattt ctgtcatttc
    34981 taaataagga tcgatttctt gctgaatacg gactaattca ccctgagact caaggaaatc
    35041 gagaaattca cggagatttt tatacttcat agcggtcata tttttcgatt tttttgcaag
    35101 tatatagaaa aacgtaaatg aaaaataccc ataaaaaatt tatagaaatt ttgttttatt
    35161 ttgttagaat agctcggttc aaattaaatg ccataagggg aattttatgt ttaaaagaac
    35221 attaatcggt ctagccgtgt taggtgcaag tgttgctcaa gcggatgtat taaccagtat
    35281 taagccttta ggctttattg ccagtgccat taccgaaggg gtaactgaaa ctaaagtatt
    35341 attaccggta actgcctctc cacacgatta cagcttaaaa ccttcagatg tgactcaatt
    35401 acaatctgct caattagtgg tttgggtggg tgacggcttg gaaggctttt tagaaaaaag
    35461 tattgaaaaa ctgccgagag aaaaagtatt aacccttgaa gatgttgatg cgattgatga
    35521 tattgtcgat aaagcaagca aaaaagaaga taaagacgat gatcacgatc ataaacatga
    35581 acataagcac gaacacaagc acgagcataa acacgaaggg cataatcacg aaggacataa
    35641 ccacgatcat cacggacata gccacgatga agattggcat atttggctct caagcgaggc
    35701 aagtgagctg gcagcagagc aaattgcggc acgtttaagc gaacaaatgc ctgaacacaa
    35761 agcgaaaatt gcggaaaatc ttgcaaaatt taaagcaaat ctaaccgcta aaaaagccga
    35821 aattgcgaaa caattagagc cggtaaaagc caaaggttac tacacattcc acgatgctta
    35881 cggctatttt gaaagagaat atggtttaaa ttcattgggt tcatttacca ttaacccaac
    35941 tgttgccccg ggtgcaaaaa cacttacagc aatcaagaaa aacattgcga aaaacaaagc
    36001 acaatgttta tttgccgagc cgcaatttac gccgaaagta attgaaacct tagcaaaaga
    36061 aactaaagta aatgttggcc aattagaccc actcggtgca aaagttcagt taagtgcgac
    36121 tgcttaccct gaatttttac aagttttggc tgacgaattt agccaatgtt taacaaaata
    36181 agttaaaaat cccccattta aatataaatg ggggattttg cgattacatc acttaagctt
    36241 tttttaagaa ttctgatttc aacataattt taccgcaatc gacattatgg tcaccttgag
    36301 ctaaacggat tcctttgaat tttgtacctt ttttcagtac ttcagacgag ccttttaatt
    36361 ttaaatcttt gattaataat acatcgtccc cgtcagataa taaattgcca ttactgtctt
    36421 ttacaattag cacatcatca tcttgatccg tttcttcgcc cgtccattca tacgcacaat
    36481 ccgggcaaac aaattgaatt gagtcgtggt aagtattttc gcttttacat tcagggcagg
    36541 ttgggtaaat cattttaatt cctcaaatta ataaagaacc agattatata ccgaaatcca
    36601 gcaaaacgct aagcggtcat attttgccga ttttttacca atcgagctaa aagtcagtta
    36661 gaatagcctt aattacacaa aaaggaggat actatgatag tcgatccgaa ttatcagcaa
    36721 gaattagaaa aatacgaaaa tccggtacca agccgagagt ttattttaaa tacaattcgt
    36781 gaacataacg ccccaatgag ccgtgatgaa ttattgtcgg cttttcatat tgacgatgaa
    36841 gaacgaatgg aaggcattcg ccgccgtctg cgtgcaatgg aaaatgacgg tgaattggtg
    36901 ttcaccaaag gcaaacgcta tgcgttgccg gaaaaaatgg atttaatcaa aggtacagtt
    36961 atcggccatc gtgacggtta cggttttttg caagtggaag gacacgaaaa aggggcgact
    37021 aaaagcgaag attggtttat tcccaacgcc caaatggtaa aggtaatgca cggtgacttt
    37081 gtgctggcac aaccaaacgg cacagaccgc agaggtcgga aagaagtccg cattgtgcga
    37141 gtgttggagg cccgtaagaa acagattgtc gggcgttttt tccttgaaag cggtatcggt
    37201 tttgttgtgc ctgatgacag ccgcgttaac caagatattc tcattccgga tgaacaccgt
    37261 atgggggcga gaatggggca agttgtggtg gtggaattac aggaaagaaa agcgagtttt
    37321 agccgcccgg tgggaatcat tactgaaatt ctaggcgata atttagcgcc gggaatggaa
    37381 attgaaattg ccctacgcaa tcacgatatt ccgcacattt ggccggaagg ggtagaaaaa
    37441 caaatccgcc aatttagtag cgaagaagtg ccggaagaag ccaagcaagg gcgggtggat
    37501 ttgcgagatc tgccactgat taccattgac ggcgaagatg cccgagattt cgatgatgct
    37561 gtatttgcca aaaaagaggg caacggctgg cggttatggg tggcgattgc cgatgtaagt
    37621 tattatgttc gcccaaaaac cgcattagat ttggaagccc taaatcgtgg taactcggtc
    37681 tatttcccga atcgggttgt gccaatgttg ccggaagtgc tttccaatgg cttgtgttca
    37741 ctcaatccac aggttgacag gctctgcttg gtggcggaaa tgtcggtttc cagcaaaggg
    37801 gaattacaag attatcaatt ctacgaagcg gtaatgaact ctcacgcccg tttaacttac
    37861 actaaagtgt ggaaaatgtt ggaaggtgat gaagccttgc gtgaacgcta tgctccatta
    37921 gtgccgcata ttgaagaact ctatgcaatg ttccaaacct taatgaaagc tcgccataaa
    37981 cgaggggcga ttgaatttga aaccattgaa aatcaattta ttttcaatcc gcaagggcga
    38041 attgagcgaa ttgagccgtt aatccgcaac gatgctcata aattgattga agaatgtatg
    38101 attttagcca atattgctgc cgctcgtttt gtggaaaaag cgaacgaacc ggcgttatat
    38161 cggattcacg ataagccgag tgaagaaaaa ttgctcagtt ttaaatcctt tgtgcgtgag
    38221 tgtggcttaa cctgggacgt aggcttagat ccaaccccaa aagattacgg tgtactactg
    38281 gagcaaattg ccgaacgtgc cgataaagag ttgattcaaa cgatgttgct ccgctcgctg
    38341 aaacaagcag tgtatgcggc ggataatatc gggcatttcg gcttggcatt aaccgaatat
    38401 gctcatttta cctcgccgat tcgccgttac ccggatttac tgttacaccg tgcaattaaa
    38461 tatctgatcg aaaaaggcaa aggcaacact cgctactata ccgatggcgg tggttatcac
    38521 tacaagttag atgatatgga cgaattcggc gataaatgtt ctgccaccga acgccgagct
    38581 gatgaggcaa cccgagaagt ggcagattgg ctgaaatgcg aatttatgca agatcatctt
    38641 ggcgaagagt ttgatggcgt gatttcgagt gttaccggct ttggcttatt tgtaaaactc
    38701 aatgagcttt taattgacgg attggttcat atttcaacgc tggataatga ttattaccac
    38761 tatgatgcgg accgacaacg tttaatcggt ggcagtggga tcatctatcg tttaggcgat
    38821 gcagttagag taaaagtaat caatgtgaat ttagacgaga aaaaaattga ttttgagtta
    38881 ctcaccggta ataagaaaac cggcaaaacc gccaagaaaa aagcaaaagc gacagaggtt
    38941 cctgttttca aagagcctaa aacggtaaaa aaagccaaaa aagtcgctga gaaaaaaccg
    39001 gcaaaatctg caaaaaaacg gacaaaaacg accgctagta aatcaaggaa aaaatagcaa
    39061 atggattaca aaaaacaaat tttattcagc cttttatttg ctttagtaat tgcaataata
    39121 agctattttt tgtttaccta tatcccgttt gattgtagcg atctgagcaa actcaacgat
    39181 tcacaacgtt tagagtgccg aactgccgaa tttctgggcg tttattactg gctgccgcac
    39241 actaccacgc tgtttttcgg ctcggtgtta ttatattggg cggtttatgg catgatttca
    39301 ttagtgcaag cagtgctcaa acgctaacaa gcagttttgt ttttgcaaaa agttgcaaat
    39361 ctcatctgaa taatccttcc aagatcaaag gtctatcaaa aaagatagac ctttattgtg
    39421 taaataaact aaaactcctt gatagatgta tcacatatct ataaaattcc agcaattaag
    39481 tgggaaaaag tggtaaattg tggaactttt ccttaaattt aacctcattt aaaaaggtaa
    39541 atcagtaaaa tgtttcgtgg tgcaagttca atcagcattg atagcaaagg gcggatcgct
    39601 attccgaccc gttatcgtgc cgagctattg gaaaaacatc acgggatctt agtttgcact
    39661 gtggatatcc gccagccttg tttgttgctt tacccacttc acgaatggga aatggttgaa
    39721 cagaaattgt tggcactatc taattttgac cctgttcaac gccgtattca gcgagtaatg
    39781 caaggctttg ctaccgaatg tgaaatggat tcggcagggc gaatactgct tagccctaca
    39841 cttcgccaac acgcacaatt agagcaacaa attatgctgg ttggacaatt aaacaaattt
    39901 gaaatttggc aagataaaca atggcaagca caaattgccg aagatcttgc ttttggcagt
    39961 tcggcagaaa ttttagactg cgaagcattg aaaaacctgt ctctctagta attggaaatt
    40021 gagatgagcg agaacccaaa acatattaca gtattattgc acgaagcggt tgacggcttg
    40081 gcaattaagc ctaacggtat ctatattgac ggtactttcg ggcgtggcgg gcattctcgc
    40141 ttgattttat ccaaactggg cgaaaatggg cgattaatcg caactgatcg tgacccacga
    40201 gcgatagccg aagctcaaac gattagtgac cctcgttttc aaattgaaca tacggcattt
    40261 tctgccattc ccgaactgtg tgaacgaatg gggttggtgg gcaaaattga cggtatttta
    40321 ttggatttag gtgtgtcttc cccgcagctt gacgaagccg aacgaggctt tagttttatg
    40381 cgtgacgggc cgcttgatat gcgaatggat accaccaaag gcttatcggc agccgagtgg
    40441 cttgcccaag tttcggcaga agatttagct tgggtattga aagaatttgg cgaagagcgt
    40501 tttgccaaac ggattgcaca agcggtcgtt tcttacaata aatctgcaaa tgaaaaaatc
    40561 agccgcactt tgcagcttgc gcaaattatt gcggatgcgg tgccgtttaa agataagcac
    40621 aaacaccctg caacccgttc gttccaagca attcgcattt ttatcaatgg tgaattagac
    40681 gagctggaaa aagctttaaa ttccgcatta acggtgttag cccctgaagg gcgtttgtcg
    40741 attatcagct ttcattctct agaagaccga atggtgaaac agtttgtgcg taagcatagt
    40801 aaaggaatgg acgtaccccg tggtttaccg attttagaag cagagctaac caaaaatatt
    40861 ccgctgaaaa ccattggcaa agcgattatg ccgagcgaag ccgaaattga agcaaatgcc
    40921 cgctcacgca gtgcggtatt gcggattgcc gaaaaacgct aacagtaaat agggaagaat
    40981 atgtcgaacg aacgttatcc gttacatcaa atcatcattg atgatatctt tagccataac
    41041 aaagtggctc ttttattgtt gattggtgta gtgatttcag cagtggctac gatttggata
    41101 acccaccaga ctcgtttatc ggtgagcgaa caagggcaac tgattcaagc aaaccaaaag
    41161 ttggaaagcc aatatactaa tctgcaatta gaagaaaaca gcagaagcag tcgggcaaga
    41221 gttgatgccg ccgctaaatc gttcggatta cagccgatta aaaaagagca agaaattatt
    41281 ttagttgaat aaaaaatggt taaatcagtt aaattaaaac gtaagcaaga agcccctgtc
    41341 gcaaaagcag agcctcaaca agcagaaggt aaaaaaacac cgagtttttt acctactcgc
    41401 tttagagtgg ttgtgttttt tatgctatta atggttggtg gcttactagc acaaaccgcc
    41461 tatattcagc tttttgactc tgaaagatta attaaagagg ctaataaccg ctcacttcgt
    41521 actaaagaac tccaatttac ccgtggacgt attttagatc gtaacgggcg ttttctctct
    41581 attagtgtgc caatgtactc attaacactt gacccgagag aatactttga tactaagctg
    41641 cgtcgttcta acgaaagctg gcgtgcctta gcgattgaaa tggaaacatc aaaaggtaaa
    41701 attgaggcaa acgttaataa atttattgaa aagaaaaatt tttcaaaaga aaaagtagat
    41761 tttgatccac gttctatttt aaatactaaa agtgaaggtt attggactca gcttgcccaa
    41821 gttacaggtt tggattacaa cagtttaata gaaaaagtac ggaataaccc tagctcggtt
    41881 tttttacgtt tagataacga aaatttagta agagaacgcc agaaattcca agcgttaagc
    41941 aaagaaatcg gccgttccta taatgacata atggacgagc tttatagcaa aaaccgccag
    42001 cgattccttt acttatcccg tcatcaatct gaagcgatca gcgaatatgc aaaagaacta
    42061 gatattgatg cattagtgat taaagtcgaa tcacgccgtt tttacccgct ggcagaagaa
    42121 tcttcacagt tgatcggttt tactgataaa gatgatatgc acggttcgga agggctggag
    42181 cgtagttttg attccttact tatcggcaaa aacggtaaac aaattatccg aaaagatgcc
    42241 aaaggcaata ttgtggaaaa tatccgttcg gagaaacagt acgatccgca agatgttatg
    42301 ttaagcattg atgaagaatt gcagtctatg gtgtacggtg aaatcaaaaa agcggtacag
    42361 gaaaataatg cggaatcagg cactgcggtt ttggttgatg tgcaaaccgg cgaaattttg
    42421 gcaatggcaa atgccccttc attcaaccca aacaaacggg atagttttaa acctgaatta
    42481 atgcgtaacc gtgctattac cgacactttt gaaccgggtt caacggtgaa accttttacc
    42541 gtattaaccg cattacaaaa tggggtaact tatcgtgatg aagttattgg cactcgccca
    42601 tttgtcgtca atggacatac aattaaagac gttgctccaa gggacagcct tacgcttacc
    42661 ggcatcttgc aaaaatccag taacatcggg gtcagtaaat tagccctcag aatgccggca
    42721 aatgcgttag tggatactta cacgaaagtc ggtttcggta aagacaccgg tttaggcttg
    42781 ggtgaacaac gaggtacgaa cggtgatcgc aaacgttggg cggatattga acgtgctacc
    42841 ctttcctatg gatacggttt aaatgtgacc ccattacaac ttgcccgtgc ttatgcgact
    42901 ttaggaagtt tcgggctgta tcgcccactt tcgattacca aggtcgatcc gccggtgatt
    42961 ggcgaacggg tgctaccgga aaaaaccacc cgagatgtcg tgcatatgat ggaaagcgtt
    43021 gcggctaaag gcgaaggcgg acaccgtgca gcggtggacg gctaccgtgt agccatcaaa
    43081 accggtacaa tacacaaatt agaaaaaggt aaatatgttg aaaaatatat tgcttatacc
    43141 gcagggcttg ccccggcaag cgatcctcgc tttgcattag tggtattaat caacgaacct
    43201 aaagcaggca actattatgg tggctttgtt tctgcaccac tgttctcacg cattatgggt
    43261 tacaccttaa aacaacgtaa tattaagccg gataacttaa cggaaaatac ccaaagtgcc
    43321 gtgcgtgaaa ttaaattaga acgccctatc aattaaggtt agctatgaaa cgtttactcc
    43381 cttttctgac agaacttgat gcttgggtgg aagaactcac cgagctaaaa caaatgacac
    43441 ttgatagtcg ccaagttcaa gccggtgatc tctttgttgc tttaaaagga catcaagtcg
    43501 atggcagaaa atttattccg aatgcgatag aacaaggagc agcaattatt ttggctgagg
    43561 ctgatgaaga tcaaccggaa attgagcttg atccgaaatt tgcaaaattt aacctagatc
    43621 gcaccgcttg ttgcaaggtt gtctctgttc cacgtctgcc aaaattgctc tctgaaattg
    43681 caggagctct ttaccataac ccgtcacaca agctgacttt agccggcatt accggcacga
    43741 acggtaaaac gactactgct caattattag cacaatggca taatttattg ggtgggaaat
    43801 cggcagtaat gggtactatc ggcaacggtt tgtacggaca agtgcaagaa gcggtaaata
    43861 ccaccggctc tgccattgaa attcagcata atcttgcgaa ctttgttgaa cttggagcgg
    43921 atttttgtgc gatggaagtc agctctcacg gtttggctca atttagagcc gaagccttgg
    43981 attttgattt agcgatcttt acgaatttaa gccgagatca ccttgattac cacaacacga
    44041 tggaagagta tgcccaagcc aaattccgtc tcttcaacga attaagcacc aaagctcaag
    44101 taattaacgc cgatgatgaa atcgggcgtg aatggctgac acaattacca aatgcagttg
    44161 cggtaagcac cgatccgaag tttgcaggca accaccaatt tgtcaaagcc actgcggtaa
    44221 aatttaccct acaaggggca agtattgcgt ttgaatcaag ttggggcaat ggcgagttac
    44281 atagccgttt aatcggggct ttcaatgtaa ataatctgct taccgccttt gccggacttt
    44341 tagctcttgg ctttgatatt caagaactgg ttaaaaccgc cccgaattta gttggcgtag
    44401 caggtcgaat ggaatgcatt accgctccaa ataagccaat ggtaattgtg gactatgctc
    44461 acacccctga tgctcttgaa aaagccctac aagcggctcg tttacattgc gaaggcgaac
    44521 tttggtgcat tttcggctgt ggtggagacc gtgacgccgg caaacgccca ttaatggcga
    44581 cgattgccga gaaattaacc gataaagtga ttgctacaga cgacaaccct cgcaccgaag
    44641 ataatcaaaa gattatggca gatattgtga aaggttttag taaaccccaa caaattatcc
    44701 acaatcgtga agaggcaatt aaaaccgcca ttgagcaagc taaagccaca gatgtgattc
    44761 taatcgcagg caaaggtcac gaagattatc agattattgg cacagagaag ttacattttt
    44821 cggatcagga aacggcaagg aaatatctgt tttaatgtca ctttctttgc acaagcaaag
    44881 aaaagtgaca gtgacaaata caaaatgctc gtaattaatt ttataaagaa aaagataaat
    44941 caatgataaa actaaccacc caacaaatcg ctgaaatcct aaatgccaaa ttgatcggca
    45001 atggcgaaac tgtggtagaa accaccagca ccgacacccg acaagcggtt gaaaacggct
    45061 tattttttgc attaaagggc gagaactttg atgctcatca ctatcttcaa aatgcagtcg
    45121 cacaaggttg tgtagcggtt gtggttgagc gtgagtgtga aattgatgta ccacaacttg
    45181 tggtggcaga tacccgtttg gcattggggg aattggcgaa atggttaaaa gctaagctga
    45241 acccgaaaac ggtagcgatg acaggttctt ccggcaaaac aaccgtcaaa gagatgacgg
    45301 caaaaattct gcaaaaaatg accgcttgcg aacaggaagt gctttatact tttggtaact
    45361 taaacaatga cttaggtgta ccgatgacct tgcttcgctt aaccgaacag cataaatatg
    45421 cggtcattga gctgggggca aatcatatcg gtgaaatcgc ttataccacc gctatcgctc
    45481 agcctgatgc ctgcttggtg aataatgtgg ctgcggcgca tttagagggg tttggttcat
    45541 tagcaggcgt ggcacaagcc aagggcgaaa tttatcgtgg cttgaaagaa aatggcaaag
    45601 cgattgtcaa tttagctttt tattatccgc aatggcaaaa agagattggc tcacgggaaa
    45661 tgcaatcttt ctcttatatc gggtcagatt cggattctta cgcagattac tgggcggaag
    45721 atgtagaact gcatttaagc ggttcacgct ttacgctaca taccccacag ggcgaaattg
    45781 ctattgatct gccttatttg ggcaaacata acgtgagcaa tgccttagcg gcaacttcgc
    45841 tggcgatgtc tgttggggca acgctagaag cagttaaggc agggcttgag cagcgttcaa
    45901 tggtaaaagg gcgtttgtat ccggtgcaaa ttaacgacca ctgtttgttt attgatgaca
    45961 cttacaacgc caatgtggat tcaatgaaat cggcgatttc tgttttggaa aattatccgg
    46021 cttatcgtat ttttgcagtg ggtgatatgg cggaattggg tgaagaaagt agcaaatgcc
    46081 accaagaagt agcggatttt gccaaaaatg cagcattaga tttaatcgtg agctttggaa
    46141 aagaaagtgc ggtaatcagc caacaggcag aacatcattt taccgataaa cagcaaatgg
    46201 ttgatttcct actgccgatt attttgcaaa aaatcgaaca aaaacaaccg cttgtattat
    46261 tggcaaaagg ctctcgtagc cagaaaatgg aaaccgtgat ttccgaattg tgtaaaccgt
    46321 ttaacctaaa tttctaatta tttttaagga ctaagcaatg ttagtttggc ttgcagaact
    46381 attggttcaa tataacacag cgtttaacgt tgtctcttat attactttcc gtgccattat
    46441 ggcgttatta actgcaatgg gaatcgggct ttggatcggg ccgaaagtaa ttcgccgttt
    46501 gcagatctta aaatttggtc aggaagtgcg taatgacgga ccggaaagcc atttcaaaaa
    46561 acgtggtacg ccaacaatgg gcggagtgat gattctcgca gcgattgggg tgagtacatt
    46621 gctttgggca gatctgcgta attcctatgt ttggttcacg ctgtttgtgc tatttggcta
    46681 cggtgcagtg ggctttgttg atgattatcg taagatctct cgtaaaaata ccgatggttt
    46741 gattgcccgt tggaaatatt tttggttatc tgctatcgca ttagtggcgg tgtttggtat
    46801 gtatgcggtg ggtaaagata ccgctgcaac acaattagtc gtgccgtttt ttaaagatgt
    46861 gatgccgcaa ctcggtttat tttatattgt gttatcctat ttcgtgattg tcggcaccag
    46921 taatgcggta aacctaacgg acggcttaga cgggcttgcg attgtgccaa ctattatggt
    46981 cgcatctgcc tttgcgttaa ttgcgtgggc aaccggtaac tttaattttg cacaatattt
    47041 acatattcct tttattccaa atgccggtga attggttatt ttatgtactg cgattgtggg
    47101 agcaggttta gggttcttat ggtataacac ctaccctgca caggtgttta tgggcgatgt
    47161 tggctcactt tcgctcggcg gtgcattagg cgtgattgca gtattagttc gccaagaatt
    47221 attattggtg gtaatgggcg gtgtatttgt ggttgaagcc ctctcggtga ttttacaagt
    47281 aggttcatac aaattacgcc aaaaacgtat tttccgaatg gctccaattc accaccattt
    47341 tgaactcaaa ggctggtctg aaccacgggt tatcgtgcgt ttctggatta tcacgctaat
    47401 gctggtttta gtcggcttag taacattgaa attacgttaa ttgattgaat aaggtgcatt
    47461 gagataatgt accttatgtt atttttaaat tacagaataa attatgcaaa aacaatacga
    47521 aaacaaaacc gttactatta tcggcttagg tacaacaggg ttatcttgtg tggatttctt
    47581 taagaaaaaa aatgccaata tccaagtgat tgacacccga gcaaacccag ccggagcgga
    47641 taaattggac gtaactattc cgttgcatac cggtgggtta aacagtgaat ggttgctgaa
    47701 atctgatctt attgtaatta gcccaggttt agccgttgcc acacctgaaa ttcagcaagc
    47761 gattcaagct ggtgttgaaa tagtcggtga tgttgaactg ttttgtcggg aagcgaaagc
    47821 tccgattatt gcgatcaccg gttcaaacgg caaaagtacc gtaacgactt taactaccga
    47881 aatggcgaag caagcgggga ttaaagtggg aatgggtggc aacatcggtg tgccggtatt
    47941 aagtttgctg gagggcgatt atgacctttt tgtgctggag ctatccagct tccagcttga
    48001 gacaacttat tcactgaaag caaaagctgc cactgtttta aatattagcg aagatcatat
    48061 ggatcgctac gattcgattg ccgactatcg ccaagcgaaa ttgcggattt acgataatgc
    48121 ggaaaatatc atcgtaaacg gtgaagatgc ccaaacttac ccgatacaag cggtcaaaaa
    48181 agtgattcgt tttgcagaac aaaatgcgga atatagccta cgcaatcaga tgctttattc
    48241 aggcgatgat gcaattatcc aaactaaaca gatgctgatt agcggccgtc ataatgagat
    48301 gaatgcgtta gcggcgatgg cattagcaga agcggcgaat gttcctcgtg aaggcattgt
    48361 gaaagctttg caaatttatg gtggtttgcc acaccgtttc caagcggtgg caaccaatga
    48421 tggcgtgcgt tgggtcaatg attccaaagc gaccaatgtg ggtagcacgg tagcggcatt
    48481 aaacggcttg aatattgccg gtacacttta tttactttta ggtggtgacg gcaaggctgc
    48541 ggatttttcc gaactcaaac cattaattaa taagccaaat attgtctgct attgtttcgg
    48601 gcaagatgga gcggcattgg cagaattaag cgaacaaagt gtgttggttg aaacgatgca
    48661 gcaagcaatt gaagcaatcc gcccacaact gaaaaaaggc gatatggtac tgctttctcc
    48721 ggcttgtgcc agtttagatc agtttaaaaa ctttgagcaa cgtggcgagg tatttatggc
    48781 attagcacaa ggacagcacg cataatgtta gaaagaatta agtcggaatg ggataaatgg
    48841 gtcagattaa ccccttctaa ttcactttat gacagaactc taatttggct atttttaggc
    48901 ctgctaatta tcggttttgt gatggtaaca tctgcttcac tcccagttag cacaaggttg
    48961 aataacgatc cattttattt tgcgattcga gacgggctgt atattattgc ttcaattatc
    49021 ttttgttatg tttttgtaca aatcccaatt gaaaaatggg aaaagcataa cttggcactg
    49081 ttttttattt caatcggttt tttaatcgcc gtactcattt tcggccgctc aattaatggt
    49141 gcagtgcgtt ggattccgtt gggtattctc aactttcagc cggcagaatt agccaaatta
    49201 gcggtcattt gctattttgc cagtttctat gtacgtaaat atgatgaaat tcgtaaagaa
    49261 aaagccagtt tctggcgacc ggcagtgatt ttattcttat tcggcttctt gctgattttg
    49321 cagccggatt taggtagtac ctttgtatta tttgttctca ctttctcaat gcttttcatt
    49381 gtgggggcaa aaattatgca atttatgttt ttaggcgtgg tgggaacggt gttatttgcg
    49441 gtgttgattt taacctcgga ataccgttta aaacgtgtta cctcctttat ggatccgttt
    49501 gctgatgctt atggcgacgg tttccagctc tcgaactcac aaatggcatt tggacaaggt
    49561 gaattttggg gacaaggttt aggtaattcg gtacaaaagc tagaatattt gccagaggca
    49621 catactgact ttgtaatggc ggttattggt gaagaatttg gtttctttgg tattgcttgc
    49681 atcgtacttt tacttattct attaacggtg agagccttaa aaatcagtaa agaatctttg
    49741 gtgctggaag agcgttttaa aggctatatg gcatttggga ttgcgatttg ggttttccta
    49801 caaggcttcg taaacttagg ggtggcatca ggtttgctgc caacgaaggg cttaaccttc
    49861 ccattagtga gttatggtgg ttcgagtttg gtaattatgt cgattgcgat tgcagttttg
    49921 ctacgaattg accacgaaaa ccgtgccgag cgaatcgggc acgcaaaaat taaaaccatc
    49981 tagccgagcg gtctgcaacg ttacaatttg caaaatttta caaaaatgag accgcttgta
    50041 ttagctggaa agcataaaaa ttcagtaaaa tagcacgttt tagaataaaa aagagttgaa
    50101 aatggcgaag aaattattag taatggcagg tggaacaggg gggcacgttt tccctgcaat
    50161 tgccgtagct cgagagctac aaaaacaagg ctggcaaatc cgctggctgg ggacgaaaga
    50221 ccgaatggaa gccactcttg tgccgaaaca cggtattgag attgatttta ttgaaatctc
    50281 aggcttgcgg ggtaaaggcg ttgcagcatt gttgaaagca ccgtttgcta tttttaaagc
    50341 ggtgatgcaa gcccgcaaaa tcattaaaaa ttatcagcct gatgcggtgt tgggaatggg
    50401 cggttatgtg tccggtccgg gcggtattgc ggctaaatta tgtggcgtgc cggtgatttt
    50461 acacgagcaa aacgcagttg ccggcctaac caatgtgtgg ctatccaaaa ttgcccgcaa
    50521 ggtgttacag gctttcccta ctgcttttaa agaggccgaa gtagtaggta atcctgtacg
    50581 tgaagattta tctgctcttc cgctgccgaa tgaacgtttc gccaaacgag gctacccgat
    50641 taacatttta gtaatgggtg gcagccaagg ggcaagagtg atcaaccaaa ccgtgccgga
    50701 agtggcaaaa gtgttgggta ataatgtgtt tatcagccac caagtcggta aaggtaattt
    50761 agccggtatc gaagaagtct atcaacaaac cggcaatggg attgcttccg agtttattga
    50821 tgatatgaaa gccgcgtatg agtgggcaga tttggtgatt tgtcgttccg gtgcgttaac
    50881 ggtgtgtgaa attgccgccg taggtctgcc cgctgtgttt gtgccgttcc aacataaaga
    50941 caggcaacaa tttttaaacg ctaactattt ggcggcagat ggagcagcag tgattatcga
    51001 acagagcgat ttcactccaa aggcattaca gcaagcctta gaacccttaa ttgccaatcg
    51061 ccaactctta ttggatatgt caatgcgagc cagagcaaaa tccaccccaa tggcagcaaa
    51121 acgtgtagcg gaagtgatta ttcaagaagc gaattaactt actacaagcg gtcgtttttg
    51181 gtaaaaattt tgcaaaatgt aaccgcttgc gaatagatta aaaggacaat aaatgaaaaa
    51241 tttccaagat aaagtcaaaa aattagtgcc tgaaatgcgt cgtgtcagcc aaattcattt
    51301 tatcgggatt ggcggagccg gtatgagcgg cattgcggaa gtgttattaa acgagggata
    51361 ccaaatttca ggttcggata ttgcagacag agcggttaca caacgtctat ccgcagccgg
    51421 agcgaaagtc tttatcggac accaagcaga aaatattgct ggggcgagtg tggtggtggt
    51481 ttctactgcg attgatgaaa ccaaccctga aattattgcc gctcgagaag ctcgaattcc
    51541 ggtgattcgc cgagcagaaa tgcttgccga aattatgcgt tttcgccacg gcattgcgat
    51601 tgcaggcaca cacggtaaaa ccactacaac cgcaatgatt tcaatgatct acaccgaagc
    51661 aaaattagat ccgactttcg tgaatggcgg tttggtaaaa tctaccggca aaaatgctca
    51721 tttgggggcg agccgttatt taattgccga agccgatgag agtgatgctt ctttcttgca
    51781 cttgcagcca atggtgtcgg tagtaaccaa cattgagcct gaccatatgg acacctatgg
    51841 tggcgatttt gagaaaatga aagagactta cgtacgattt ttgcgtaact tacctttcta
    51901 cggcttagcg gtaatgtgtg ccgatgatga aacggtaatg gaaattgctc ctcgtgtcgg
    51961 cagacaagtg attacctatg gctttagcga aaatgcggat taccgaattg aagattacca
    52021 gcaaaccggc ttccaagagc attacaccgt agtttgccca agcggtgaac gaattgatgt
    52081 gctgttgaat gtgccgggta tgcacaatgc cttaaatgca accgctgcgt tagcggtggc
    52141 aaaagaagaa gggattggca atgaggcgat tttagctgct ttagctgatt tccaaggggc
    52201 aggacgccgc tttgaccaat taggttcatt tattcgcccg aacggcaaaa ttatgttagt
    52261 tgatgactac ggccaccacc caactgaagt tgatgtaacc attcaagccg ctcgttcagg
    52321 ctgggaaggt aaacgtgttg tgatgatttt ccaaccgcac cgctattctc gtacccgtga
    52381 tttattcgat gaatttgtac aagtactgtc taaagtcgat gccttgattt tattggatgt
    52441 gtatgctgcc ggcgaagctc cgattgtggg ggcagacagt aaagccttag cccgttcaat
    52501 ccgtaattta ggtaaggtcg atccgatttt ggtttcagat accgatcaac ttggcgaggt
    52561 attagatcaa attattcaag acggtgattt aattttggca caaggtgcgg gcagtgtaag
    52621 ccgcatttct cgtggcttgg ctgagagctg gaaaaattaa atactctctc cccttgcggg
    52681 agagagaccg aaaaatactt cgttcagaag tatttttcag agagagggta tatatttaaa
    52741 ggatttcaaa tgagtattaa aaacgaaaaa attgccgtct tattcggtgg cgtttcgcaa
    52801 gagcgtgaag tttcactgaa ttctggtgca gcggtaacag ctgcattaaa aagtttaggc
    52861 tataacgtag aaggcattga tactaaagaa ttcccgattg aaaaattaaa agaaaaaggg
    52921 attcagcgtg tatttaatat tttacacggc ggtattggcg aaaatggcgt actgcaaggt
    52981 gcgttagagc aaatgggtat tccttacacc ggttgtggcg taatggcatc agcagtgacg
    53041 ctggataaat tccggactaa attattatgg aatgcagtag gtttaccaac agcggatatg
    53101 gtggtggttc agcgtggaca agcggtcgat tttgaccaaa ttattgcaaa attaggctta
    53161 ccggtatttg tgaagtcttc gtgtgaaggc tcaagtgtgg gtgtattcaa agtaaaaacc
    53221 aaagaagaat tggcaccggc aattcacgag gcattaaagt ttgattccat tgtgttggtg
    53281 gaagaatttt tagccggtaa tgaatattct gtaccggtat tagacggaca agttctaccg
    53341 gcggtacaag taattccgga cggcgaattt tatgactacc acgcaaaata tgtgtcggat
    53401 aacacccaat atgtagtacc ggcattaaat gacgaacgcc aagcagaggt cgccaaatta
    53461 gtgaaagcgg cttacgatgt ggttggctgt cgaggttgga gccgtattga tgtgatggaa
    53521 gatggcgaag gaaaattccg cttggttgaa gtaaatacca acccgggaat gaccagtcac
    53581 agtattttcc caaaatcagc agcaacagtt ggtatttcct ttgaaaaatt agttgaacgc
    53641 gtattggagt taagtgctta atgggcatct tccgcaagaa gaacagcaca aatgtgcgtt
    53701 tgaatgttct taatccaaaa acacctgttt ctccacgtaa atggctagta ttcattaagc
    53761 cattaattgt gttattatgt acactatttg tattcggtgt gtatagtaat tggcaaaata
    53821 tactcgaaag ttgggataaa acaccgattc gcgcttatgc attaacacat aaaacacaat
    53881 ttacaacaaa tgcagatatt cgtgaaactt tgtctaaaga acctgctcta aaaggatatt
    53941 tcggacaaaa tattcaagag gtcaaagata agcttttatc tataccttgg gttaaagatg
    54001 tggctgttcg taaactttat cccgaccgat taagtattac tttgctagaa cataaacccg
    54061 ttgcaatttg gaatgatact aactttgtct cagaacaagg aaccgtcttt agtttaccga
    54121 aagacagaat cgataaaaat ggacttccat tactctatgg tccagatacg gaaggaaaaa
    54181 gtgtattaga ggcatggaat aaaatccgag ctgatctaaa tgcccgcaac ttggatttaa
    54241 cctccgtttc tgtagataat cgaggttctt ggacaattag gctttctaat caagtagaat
    54301 taagattagg aagaggggaa tggacttcta aaattgatcg ttttgtaata atctttcctg
    54361 aaattcatat acctgaaggt aatagattag cttatgttga tttacgttat ccacatggcg
    54421 cggcggttgg atttagtcct ataaaaaatt aaactcagtg aacacaaaaa cattatgaca
    54481 aaagcagtag aatcaaaaat tatcgttggt cttgacattg ggacatcaaa ggttgttgcc
    54541 gttgttggtg aagtattacc tgatggtgta attaatgtta tgggagctgg cgtttgccct
    54601 tctaaaggag tcgatcgagg tggcgttatt gatcttgacg ctgccgttaa ttctattcaa
    54661 agagccattg agcaggcgga atctattgcc gattgtcaaa ttatgggtgt aacactggca
    54721 atctcaggtc agcatattgt tggtttaaat gaagcaggat catcaacatt atctggaggt
    54781 attgttaccc aagataatat tgaaagtgct gtggatatgg caaaggcaat taaattacaa
    54841 gatggcttag aaacattaca catgattcca caagaatatc acgtggatag attgcctgcg
    54901 actaaaaatc caattggctt atcgggtatg cgtttacaag ttcaagcaca cttaattgct
    54961 tgccatcaag cttggttaaa aaacttaaaa aatgcggttg aacatgctaa attaaaagtc
    55021 gatcaagttg tattttcagg tcttgcctct agctattctg ttttaactga agatgaaaaa
    55081 gagctgggtg tttgcttaat tgatattggt ggcggtacga tggatgtact agtttatacc
    55141 gatggagcat taagatacag taaagtcatt ccatttgcag gtaataacat tactgattat
    55201 ttggctcgtg tatttacgac atctcgccct gaagctgaaa gccttaaagt aggttatggt
    55261 agcgcaattt cgcctccaac ccataattca gataaaaaaa ttgaggtggc aggactaggt
    55321 ggacggatgg caagaacctt tacccgagct caggtggcaa cggttacctc acaatgttat
    55381 aacgatttgc taaaagttgt tgaagaggaa ttaacccaat tacgccatga acttttccaa
    55441 aaaggaataa aacaagagtt aattgccggt gtagtcatta ctggtggtgg ctcacaaatt
    55501 gaagatattg tagaatgtgc taaatcaatt tttggttcac aagttcgtgt tggatatcca
    55561 ctcaatatta ctggcttaac cgattatgtg aataaaccac aatatgcaac agcattaggg
    55621 cttttacaat atagccacta taattatact gaacaaggta caagtacaga ttctaatgaa
    55681 gatatctttg ctcctattgg tcgtggaacc aagaaaatca ttgacttctt caaatcaaaa
    55741 ttttaatagt gttaaaataa acacgcaggg agataaaaat gtttgaacct attattgaac
    55801 aaacgcaaga tgctatcatt aaggtagtgg gtgttggtgg cggtggcggt aatgccgtag
    55861 acagaatgtc tcgctctgcc gatgatatta aaggtgttga attctttgat gtaaatactg
    55921 atgctcaagt tttaagaaaa agaaccacac gccaaactat ccaaattgga gcaagtacaa
    55981 ctaaaggttt aggtgcaggt gctgatccaa tggtaggaaa acaagctgcc gaagaagatc
    56041 gtgaggctat cgctaatgca ttaaaaggtg caaatatgac ctttattgct gttggtatgg
    56101 gtggaggtac cggtaccgga gcagcccctg ttgttgctca aattgccaaa gagcaaggct
    56161 cactaactgt aggcgttgta acaaaacctt tccgcttcga agggcctcgc cgtatgcgct
    56221 ttgcagacca aggcattaaa gagctttctc aatatgttga ttctcttatt ataattccta
    56281 atgataaatt acgtggttta ggtaagcaaa caacagcagt agatgccttt gccgcagcaa
    56341 atgatgtttt aagtaactgt gtgcttggta ttaccaatat gattaccagt tcgggcggtt
    56401 ctaccggtgc agatattaac gtggacttcg cggatgttcg tacagtaatg tctggtaagg
    56461 gacacgctat gattggtaca ggttttgctg aaggtgaagt tggtgaagga cgagcggaaa
    56521 aagcaatgaa tgatgccatt tctagtccat tacttgaaaa tgtggatatt tcaggtgcaa
    56581 gtggtatgct catcaacatt agtgctggga cagatttctt attagaagaa gtttatgcta
    56641 tgatggactt aatttatggc tttgcaacag aagatgccgc aattgtattt ggttgtaact
    56701 attaccctga aatggatgga aaagtgagtg tcactcttgt cgcaacagga ataggccaac
    56761 ctgaggaagc tctacatatg ccacataagg ctcagccagt atatgcacag caaggaaatc
    56821 atgttcaagc tacacagcct actcagccaa accatgcggt acaacaacca aactttactc
    56881 aaccgtcaag ttatggtcag ccaaatcaat ttagtggtca accacaacca ctacaacaac
    56941 ctgtggctcc aaaaccacaa tcggttgata cagcacaaat ttttaaccca aattcaattc
    57001 cgggttttat gagaaatagt caataacttc cactcatttc ggaagtaagg acaaaatatg
    57061 actaaacaaa gaacattaaa acaagcagca aaagtaacag gtattggctt acatagcggc
    57121 aaaaaagtaa ccttaacgtt acgccctgcc ccagctaata caggagttat ttatgcccgt
    57181 accgatttag agcctgtcgt ttatttccct gcaagcgcag actctattcg tgatacacaa
    57241 ttatgcacat gtatggtaaa tgatgatggt gttcgtattt caacagtaga acatttaaac
    57301 gcagcaatgt cagcattagg cttagataat gttattgttg aagtagatgc acctgaaatt
    57361 ccgattatgg acggtagttc aagcccattt atctatcttt tattagatgc cggcatcgaa
    57421 gaacaagatg caccgaagaa atttattcgc attaaagaaa cagtacgcgt tgaagaaggc
    57481 gataaatggg ccgaattaaa accatacaat aaaggtttta aattgaactt cactattgac
    57541 tttgagcacc cattaatccc caaaaatgta gggagctatt ccattgattt ttctgctgag
    57601 aactttattc agcaactaag tcgagcgaga acctttacat ttatgaagga tgtagaatac
    57661 ttgcaatcta ttggtcttgc attaggtgga agccttgata atgctattgt attagatgat
    57721 taccgaattc taaatgaaga cggtttacga tttaaagatg aactggttcg ccataaaatg
    57781 ctggattcga taggtgactt atatatgtgt ggttataata tcctaggtga atttagtgca
    57841 tataaatcag gtcatggcgt taataataaa ttattaagag ctgtattgga aaataaaaac
    57901 gcttgggagt ttgttacctt tgaagataaa gcagaagtcc cacaaggtta ccaagtacaa
    57961 caagaaattt ttatttagtc taaatggctt aaaagacgaa cagaaatgtt cgtcttttat
    58021 tttgcaaatt ttttctaata tttaaccgct tgcaacccgc ctcattagcg attttttcgc
    58081 ccttatctat ttactgttta aaaaaacagt tgtactatat acccatacag ttaatcttgt
    58141 gtggtgtatt atgcttactc aacttactat taataatttt gcgattgttc gccatcttat
    58201 tcttgaatta aatgaaggta tgtctgttat taccggtgaa accggtgccg ggaaatcaat
    58261 cgctattgat gccttagggc tatgcttggg ttatcgttct gaaagtggga tgattagaaa
    58321 cggttcggac aaagcagata taagtgcaac ctttactatg cagccacata gccctgctta
    58381 tttatggcta caagagcatg aactgcttga tgaagataat cctcaagagt gtatcttacg
    58441 ccgtatgatt aatattgatg gacgctcaaa agcctttgta aataaccgat cattacctgt
    58501 ttcacaactt cgagagttgg ggcaatatct tattcattta aatgggcaac acgcaccaca
    58561 attactccta aaaaacgaat atcaacttga aatagtcgat cattatgcca cgttacagcc
    58621 tctattgatg aagatggcaa agcaatatgg gaattggaaa gaactgaata agcaggtaaa
    58681 aaatttccaa aaacagtgcc aagaaaatga agctcgcaaa cagctattag aatatcaagt
    58741 tgaggaatta gatgaatttg caattaaagc aaacgaattt gaagaaatgg aagagaaata
    58801 caatatcttg tcttcttccg aggagcttac tgagctttca gatgaaatca cacgcttatt
    58861 aagtgatgat gaaatcaatg caaacagtct gatttataaa gcgttacgca atgcagaaaa
    58921 cttggctgag gttgatagcc aatatcaggg cattttagat atgcttaatg aggccctgat
    58981 tcagattcaa gaagcaagct ccgaagtggc tcaattagcc agtaaaattg aacaagatcc
    59041 ggaattacta caggagctgg ataatagaat tgcacaaact atatcgttag cacgcaaaca
    59101 ccatattcaa ccgaatgaat tatggcaata tcacgcgaca ttaaaagcag aactacagga
    59161 attactggat tttgaagata atgaagaaca actcattcaa aatgaaaaac aagcttacca
    59221 agagtgtata acattagcag aagaaattta ccaaaaacgt ctagatgcca cacataagct
    59281 ctctgaacaa gtaacaaaac aaattaaaca cttagcaatg gaaaacggtg agttctttat
    59341 tcatatagaa cataatcttg aaaaaatgtc tgcaaatggt gctgactatg tcgagtttaa
    59401 tttacgcagc aatttaggac aacaacccca accactggca aaaattgctt ctggtggtga
    59461 gctatctcgc atttctctgg cagtacaagt gcttaccgca aataaacttt ctacgccaac
    59521 tattattttt gatgaagttg atgttgggat tagtggctct gctgccacta cagtcggaaa
    59581 gctactgcgt aagctaggcg aaaaatgcca agtattatgt gtaacccatt tacctcaagt
    59641 ggcaagttac ggcaaccagc agtttaatgt acaaaaatat gtagaaaata atcaaactga
    59701 aacgcaaatg acattactca cagaagcaga gcgtattcac gccttggctc gactattagg
    59761 cggaagcgaa atcaccgaaa cggttttagc taatgcaaaa gaaatgctaa atttagcgaa
    59821 aaataacgaa tagccaaaaa gaaaaatcgc atcaatgaat attgatgcga ttatgaattt
    59881 ggtggaggta aacgggatcg aaccgatgac ctcttgcatg ccatgcaagc gctctcccaa
    59941 ctgagctata cccccttaat acaagcggaa taatatgctt tccgcttgaa gatgtcaatg
    60001 gctttaatca agcaaggtgt tgattgatta aaaactagct attcgcctga ataaactcaa
    60061 tcgctttttg taagcgagct aaggttcttt ctttaccgac taatttggcg gtgatatcca
    60121 ttgacggcga ttgcccactt cctgttaccg ctaaacggaa cggcataccg actttgccca
    60181 taccaatttc cagctcggca gcggtttggt tcattgcctc gtggatattt tccaccgtcc
    60241 agtcattgca agcggtcaat ttttccaata attttgcaag tggagcaacg gcttcggctt
    60301 tgaagttttt agcagcagct ttttcgtcgt aagccttaaa ttcttgatag aaatagcggc
    60361 tgctttcggc aagctctttt aaggttttgc aacgttcgcc cagtacaggg ataatttctt
    60421 ccaattttgg accgcttgtg aaatcaatgc cttgagtttg catatgccat tcaagatgtt
    60481 ttgccacata acttggggca agactgcgga tatagtgttg gttcaaccat tgtaattttt
    60541 cagtgttaaa tgcacttgcc gatttactga ctgaatgaat gtcgaacagc tcgatcattt
    60601 cgtcacgaga gaaaatctct tggtcgccgt gtccccagcc taaacgcaca aggtagttaa
    60661 ttaaggcttc cggtagatag ccgtcatcac gatattgcat tacgctcacc gcaccgtggc
    60721 gtttggagag tttttgcccg tcatcgccgt tgatcattga aacgtgggcg taggttggga
    60781 ttggtgctcc taatgctttc aaaatgttga tttggcgtgg tgtattgttg atatggtctt
    60841 caccccgcac aacgtgagta atgcccatat cccagtcgtc caccaccaca cagaaattgt
    60901 aggtcggcga gccgtcagta cggcgaataa tcaagtcatc taattcgcta ttggcgattt
    60961 caattcgccc acgcaccgca tcgtcaaata ctaccgagcc ttcggtcggg tttttgaaac
    61021 gcacaacatg tggttggctc gggtcgtttt gcggattgtg taagcagtgc tgatcgtatt
    61081 tcgctttctc tttatttgct tcttgctctg cacgtacttc gtctaaacgt tctttcgagc
    61141 agtagcaacg gtatgccgtg ccggcttcta acatttggtc gatcacttgg ttatagcgat
    61201 cgaaacgctt ggtttgaaag tatgggccgt gttcccacgc caaatccagc cattccatac
    61261 cctctaaaat agcggcggtt gcctcagggg ttgagcgttc aagatcggta tcttcaatac
    61321 gtaacacaaa ttcaccatca ttatgcttag catataacca agagtagagc gcggtcctcg
    61381 ccccacctac gtgcaagtag ccagttgggc taggtgcaaa acgggtacgg acttttacat
    61441 tcggatctaa ggggaaaagg gtttcaattt tcattttata ttgcctaatt gatgattctt
    61501 aagaaaaact tgtctatttt actacgcttg agggtgaatc atagtaaaaa attaaatttg
    61561 cggggtaaaa aatcagcaaa cggggtaaaa agaacaaaaa gggtttgacg aaacagcaaa
    61621 aatctctata attcacttcc acaacagcgg gcgattagct cagttgggag agcacctccc
    61681 ttacaaggag ggggtcactg gttcgagacc ggtatcgccc accacttcaa cttaagtgtt
    61741 tcgttgttgt atcacaatct aattttgaaa acgggcgatt agctcagttg ggagagcacc
    61801 tcccttacaa ggagggggtc actggttcga gaccggtatc gcccaccact tcaacttaag
    61861 tgtttcgttt tcaaattccc tttgatttta agtctcaagt gggcgattag ctcagttggg
    61921 agagcacctc ccttacaagg agggggtcac tggttcgaga ccggtatcgc ccaccactta
    61981 agactaaaat cataaacttc aaatggcgat ttttcgtatc tgaagggcga ttagctcagt
    62041 tgggagagca cctcccttac aaggaggggg tcactggttc gagaccggta tcgcccacca
    62101 tctatttagt atcaaagcct aaaacttata tcataatcta ataacccctt taaagtcata
    62161 actaaaaagg gaaaataaat tcagatggcc tgttgcatct gcataaatgc ctttctacgt
    62221 gcagaaatta atctttttct atctttaatt tgcttaattt gacgcaggcg taatttcctt
    62281 gtcagtaggg atttcttttt cttcaatttt ctcataagaa gaattctcct gttttatttg
    62341 accatctggt aaattttctt gttcttgcat cttttgctct tcaactcgtt gataattaat
    62401 aatactacca taataacgcc gtatattttc aacatactgt aatgcttcat atcctcgagc
    62461 atagccgtat tttagattag cataataacg tttttccgca agcaatggca gattcttttt
    62521 aacatcaagc caattatccg gatcaccacc aagttgtttt gttaatcgac gaagatccaa
    62581 caagtgcccc aatcccatat tatacgctgc taggctatac caaattctat ctgcttgagg
    62641 aatagtttcc ggcatttgtc tcattagcat atgtaaatat tcagatcccg ctttgatact
    62701 ttgtgcaggg ttagtcctat cagaaatttt cattctatct gccgtatctt ttgtcagcat
    62761 cataattccc ctcactccgg ttggagaagt tgcattagga tcccaatgag actcctgata
    62821 ggcgatagcc gccagcattt gccattctaa ttcaccttta tgtgcccgaa aaaggggttc
    62881 atatttaggt aaaatagttt taattgcatt caaatagctc tgaatatcaa cataatcaaa
    62941 cttagctaaa tgattaaaat atttctcttc tattcttgat atcagcccag tttccataga
    63001 ataagacata aaatccagca gcacagattg cagttcacta taagaactat ttgctaaata
    63061 ccataacact gggttttcat cagttaaatc aaaccctacg gctaaattag gattaatatg
    63121 ctgtgcagca gaaatatcaa ccgacattgc aattgtatgt gaaatttcac cttgtgcgac
    63181 ttttaacaat agctcttctt gtgtaaattt atccgagatc tgccatttta gttccggatt
    63241 atccacctta agctgattta atattggaat taccgcagaa ccggctggaa taatcacatt
    63301 ttcccgcaaa tcggaaagtc gatatggtct agcacttccc tttttataaa caagctgcca
    63361 agaagccgaa taataggaag gacctatctg aaattcatcg tttaattcag aatggtaaag
    63421 cagcccagcg gcagcaatat caacatcatt atttcttaag gcctcaaaca atttctcgct
    63481 actatcataa gttttaatat caagattgac ctttaaatat tgagcaaagg ctgttgctaa
    63541 atcatattca atgccacttt ttccttcagg accaacaaag taagaaagtg gatggttgat
    63601 cattccaacc tttaacgttt tgctttgctg aatttgtgta taatgatttg cttctgaatg
    63661 aatgattttt tgccaaggaa aaatcatatc ccaagcccac agtaacaatg ctacggcaat
    63721 aaaaaggcga gcaattaatc ctttcaattt aaaatcctca ttatttcaag ctaagcatta
    63781 agcctatctg aaat
//
LOCUS       DANLTI010000002        49041 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.002, whole genome shotgun sequence.
ACCESSION   DANLTI010000002 DANLTI010000000
VERSION     DANLTI010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 49041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49041
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.002"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            74..1300
                     /locus_tag="PXB09_000067"
     CDS             74..1300
                     /locus_tag="PXB09_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDL5232230.1"
                     /translation="MAMPSQRFSLTWVLNLFGTAVGAGVLFLPINAGMGGFYPLIIMT
                     LLVGPMTYLAHRGLTRFVLSSKYKGSDITAVVREHFGEQAGKLITLLYFFAIFPILLI
                     YGVGITNTVSSFMENQLHIAPPSRAVLSFMLIAAMIGVMLLSEQVMLKITTCLVYPLV
                     LILLGLSIYLIPQWNTAALQQMPTTGDFLTTLWLTIPVLVFAFNHSPAISSFALSQQK
                     YYQDDKKAEIESAKVLRSTAFILVLFVMFFVFSCVLTLTPEELAQAKVQNISILSYLA
                     NKFDNPIISYFGPLVAFLAIGSSFFGHYLGAREGLEGLVNQMRKEPIDPSKFRKITAI
                     TFLIILWIVATINPSILGFIESLGGPIIAMILFIMPVYAVYKVPALARFKGEFGHLFV
                     LVMGCIAISAIVYGLL"
     gene            1357..2733
                     /locus_tag="PXB09_000068"
     CDS             1357..2733
                     /locus_tag="PXB09_000068"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDL5232231.1"
                     /translation="MISVFDMFKVGIGPSSSHTAGPMKAAKEFVDELQNRKFLNKIDR
                     LRVDVYGSLSLTGRGHNTDIAIIMGLMGYLPHNVDIERIEQTIENLKQNKQLIIAESS
                     VEPKVIAFDFYEDMPFHRDFLPRHENGVKFSALSGEELLFQNTYYSIGGGFIVDEANF
                     EQVKNSDLSVPFPYQNAADLLAHCKNNGLPLSSLVWKNELALRSRVEISDYLAMIWNT
                     MEACIERGLNTEGLLPGPLKVVRRASGLRRMLEANSKFNTDPMQIIDWVNMFALAVNE
                     ENAAGGRVVTAPTNGACGIVPAVLAYYQKFIAQLNQDTIERYLLTTSVIGSLYKMNAS
                     ISGAEVGCQGEVGVACSMAAAGLTEIMGGSAEQVCMAAEIAMEHNLGLTCDPVGGQVQ
                     VPCIERNAIASVKAINASRMALRRTSSPQVSLDKVIETMYETGKDMNAKYRETSTGGL
                     AIKILPCD"
     gene            complement(2788..4377)
                     /gene="purH"
                     /locus_tag="PXB09_000069"
     CDS             complement(2788..4377)
                     /gene="purH"
                     /locus_tag="PXB09_000069"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDL5232232.1"
                     /translation="MAIQQALLSVSDKKGIVEFARGLSARGVKLLSTGGTAKLLAEAG
                     LLVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDEVMNQHGIERIDMVVVNLY
                     PFAQTVANPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVNNNDFDAILAEMDQHQ
                     NSLTLETRFNLAIKAFEHTAQYDSMIANYFGQKVPPYQGAEEEDLTQPSGQFPRTLNL
                     NFVRKQTMRYGENSHQNAAFYVENELKEASVSTAKQLQGKALSYNNIADTDAALECVK
                     EFSEPACVIVKHANPCGVALGKNILDAYNRAYQTDPTSAFGGIIAFNRELDGETAQTI
                     ADRQFVEVIIAPTVSASAKEVLATKKNVRVLECGEFSEAVKRLDFKRVNGGLLVQDAD
                     QGSVSIDDLKVVSERKPTEAELKDLLFCWKVAKYVKSNAIVYAKDGQTIGIGAGQMSR
                     VYSAKIAGIKAEDEGLQVVGCVMASDAFFPFRDGIDAAAKVGITCVIHPGGSMRDQEV
                     IDAANEHGMAVVLTGMRHFRH"
     gene            4549..4818
                     /locus_tag="PXB09_000070"
     CDS             4549..4818
                     /locus_tag="PXB09_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5232233.1"
                     /translation="MINHNLADFVFEYFTENNLKAGTLRYRYIKENVIDAYSTRVDDA
                     FQGKGIAGELYNALIAFAQEKGLKIKPSCSYIEVKMQRSHRDLIA"
     gene            complement(4905..6350)
                     /gene="dacB"
                     /locus_tag="PXB09_000071"
     CDS             complement(4905..6350)
                     /gene="dacB"
                     /locus_tag="PXB09_000071"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDL5232234.1"
                     /translation="MIFKNFTRAFLNKFILSTLLIPSITQAEINTEELLNTLPAGTSV
                     SFIAKNLDTNQIITQYQSDIFMLPASTQKVFTALAAKLTLNDDFRFQTALLTNGKVEN
                     GVLKGNLIARFSGDPELTSGQIYQLMSKLKQQGINKIEGDLILDPSVFASHDKASGWI
                     WNDLTMCFNAPPAAINVDHNCFYVTLNADQPIGEFAKVNVPSAYPVQVFSSAYIVEPK
                     EAPFCQLDVVVHDNNRYQIKGCMARQSQPFGLSFSVQDPTNYGANMLKAQLKSLKIAF
                     NGQVKEPLTAQNGTLLAEHYSEPLPVLLKKMMKKSDNQIADALFRTVANKQHNRPASF
                     QLGSYVIRQLLKTKANIDFKNSVVADGSGLSRHNQVSSRTMLETLEYIAQNEESLKLF
                     ETFPIAGVDGTISGRGSISTEPLAKNLIAKTGSLKGVYNLAGFMKNARGERIAFVQFI
                     NGYSTGELESKTKRAPLNTFENKFYMALFNE"
     gene            6447..6923
                     /gene="greA"
                     /locus_tag="PXB09_000072"
     CDS             6447..6923
                     /gene="greA"
                     /locus_tag="PXB09_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDL5232235.1"
                     /translation="MKQIPMTVRGAEQLREELDFLKNVRRPQIIDAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVTKMANNGKVIFGATVQLVNADTDEE
                     VTYRIVGDDEANIKEGLISVNSPIARGLIGKEVDDSVSITTPGGKVEFDIVGVEYI"
     gene            complement(6979..7395)
                     /gene="ndk"
                     /locus_tag="PXB09_000073"
     CDS             complement(6979..7395)
                     /gene="ndk"
                     /locus_tag="PXB09_000073"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDL5232236.1"
                     /translation="MIQQTLSIIKPDATRRNLIGKILAQLEENGLTIKALKKVHLTRE
                     QAEGFYAEHKGKDFFEPLVEFMTSGSIVVSVLEGENAISHYRALMGATNPDNREKGTI
                     RDLYALSMRENSVHGSDSEESAKREIAYFFVPSEIV"
     gene            complement(7405..9483)
                     /gene="metG"
                     /locus_tag="PXB09_000074"
     CDS             complement(7405..9483)
                     /gene="metG"
                     /locus_tag="PXB09_000074"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDL5232237.1"
                     /translation="MANQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGN
                     EVHFVCADDAHGTPIMLNADKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEE
                     NRQITTDIYKTLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE
                     VCASTYSPMDLINPRSAVSGATPVVKESEHFFFDLPSFEGMLKEWTRSGSLQPEIANK
                     MQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDF
                     DEFWQKDSTTELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSK
                     SRGTFIQANTYLKHLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLA
                     SRNASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFNKAIRAIMELTDKA
                     NKYIDDKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQSE
                     LRWDNIATPLFGHTVAPFKSLFSRLEKKQIDAVIDETKALFAEANKKTENQTKGTQKV
                     EQQAVEKQENIAVEPISPEITIDDFAKLDLRAAKVLNCEAVPKSDKMLRFELDLGDHQ
                     RQVFSGIKAAYPNPEALIGRFVIVIANLAPRKMSFGMSEGMILSAGTGGANLFLLDAD
                     SGVQPGMQVK"
     gene            9695..10666
                     /gene="menC"
                     /locus_tag="PXB09_000075"
     CDS             9695..10666
                     /gene="menC"
                     /locus_tag="PXB09_000075"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDL5232238.1"
                     /translation="MRQVKLYRYQLPIQTGVVLRKQPLKERQGVLVCLQEQEKVGWGE
                     IAPLPSFSQESLEQAENQAVNWLKAWQKGEPETLEQLFPSVAFGLSCALAELNNELGE
                     QANNQSAVLCYGDLEKLHTAFSQHTNPIGKIKIGLNPEQEGEQANLLLHTFPNLRLRL
                     DANRLWSLEQAVKFAEKIANEHKPRIQFIEEPCQALELSRQFATQTDIAIAWDETVRE
                     ANFLVKKEPNLTAIIIKPTLVGSLEKCVNLIQQAQKQGLVAVISSSLESSLGLTQLAR
                     IAQQYTPNSVPGLDTLNLMQHQLLRDWHDSSLPLVGLESEFVREVVV"
     gene            10911..11612
                     /gene="rsuA"
                     /locus_tag="PXB09_000076"
     CDS             10911..11612
                     /gene="rsuA"
                     /locus_tag="PXB09_000076"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDL5232239.1"
                     /translation="MRLDKFIAENTGLTRSQAAKVLKSGVVTVNGNIEKSGAAKISQE
                     DEIYYEDQKLEWVEEGQYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLD
                     VDTTGLVLLTDDGKWSHRITSPKHHCEKTYLVTLADPVEDFYAQRLAEGILLRGEKEP
                     TLPAQLEILDDYNVNLTISEGRYHQVKRMFAALGNKVEALHRWRIGDVVLDERLEEGE
                     FRSLTSEEIASFNGK"
     gene            11602..12783
                     /locus_tag="PXB09_000077"
     CDS             11602..12783
                     /locus_tag="PXB09_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDL5232240.1"
                     /translation="MESRRPSLSFFIILGMMAMLPPLAIDMYLPSFLDIARDLAVSQE
                     KVQTTLAVFTLGFGAGQLFWGPMADSFGRKIIILIGLVGSAIAAYFLTQVQNIETFYL
                     LRLVQGLCAAAPAVVLGALVRDLFERNLFAKLMSVIMIISMLAPLLAPIVGGYIAKYF
                     HWHSIFYVLVAMGILCVVLISWKIPETLAPEKRLPLSFGKTLSNFAILLKHRPTLGYV
                     LIGGLTFAGIFCFLTSGSIVYIGLYGVSQENFGYFFGLNMIVMVTMTAINSKMVVKVG
                     SETMLRIALAMQLLAGIWLALVAIFDLGFWAMAIGIPLYIGMLSTIGSNASAAILEQF
                     PQMAGTANGVAGTARFGVASLVGAGLSHIAVTSAAPMLLAMALCVMLAGVVYYFLCYK
                     R"
     gene            complement(12923..14242)
                     /gene="rlmD"
                     /locus_tag="PXB09_000078"
     CDS             complement(12923..14242)
                     /gene="rlmD"
                     /locus_tag="PXB09_000078"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDL5232241.1"
                     /translation="MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFI
                     ENALPDEQVEFKVLEEKRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLEL
                     QRKAKQQALFQRLQKLQTHAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNS
                     NQIIPLAHCEVLVEPLANLLPKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGAL
                     SAQDNHNLRQFATQEQLSLFVMTSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNAT
                     LNEKMVEKALEWLELSNQDRVLDLFCGMGNFTLPIAERAKSVVGVEGVEPMVQQAREN
                     AVTSGLKNVEFYQTNLDEPFSDKPWAKEPFNKVLLDPARNGALFCLDHLTSLNPERIV
                     YVSCNPATLVRDAEKLLQLGYRLEKAAMIDMFPHTGHLESISLFLKS"
     gene            14327..15652
                     /locus_tag="PXB09_000079"
     CDS             14327..15652
                     /locus_tag="PXB09_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase
                     family protein"
                     /protein_id="HDL5232242.1"
                     /translation="MISSVWNERYLADKKREQDHRSPFQRDRARLLHSEAFRCLQAKT
                     QIHAVGEDDFYRTRLTHSLEVAQIGSSLREKLLADVEGFQAVCSEQEFAKNMANLTAL
                     LPDHSLVESLCFAHDLGHPPFGHGGEMALNYKMYAFGGFEGNAQSFRIMTQLEPYTET
                     AGMNLTRRTLLGVMKYPALLSQTSPIEPAEMSEARHINLHHFPQSKGIFDDNNHFFEW
                     VLAPLSEKDRRQFCTVQPNQDPKQPNKTQYKSLDCSIMELADDIAYGVHDLEDAIVGG
                     MVTPQSWQNAEKLLAECQSDWVKQRLPEIREKLFSQHRYERKDVIGALVNHFITNVRW
                     KALPEFDEPLLRYNAYLPESVACVLKILKDFVYQYVICDAKTQRVERKGQRILMELFD
                     ILSSDPMRLLPNNVRERWKNAEESKRARVICDYLAGMSDGQAFKLFESL"
     gene            15773..16072
                     /locus_tag="PXB09_000080"
     CDS             15773..16072
                     /locus_tag="PXB09_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232243.1"
                     /translation="MRFLPSEIYQPRGELVKADRQGNGEFEVEYRVSGNDVRGLAKSA
                     IAHAKRKGFHLVESDIHRDDADLKFKRGDQELDIEIEVKGRNRIEYKADLDLDKN"
     gene            16233..19145
                     /gene="rapA"
                     /locus_tag="PXB09_000081"
     CDS             16233..19145
                     /gene="rapA"
                     /locus_tag="PXB09_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDL5232244.1"
                     /translation="MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAI
                     AVAPLTRVQFQAGDRINSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDH
                     KISFSKPQDRLFSAQIDRSDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIA
                     KEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEML
                     RRFNLKFSLFDEERCSDFDKQDENGDDVSENPFESEALVITSLNWLETSPQRANQVLA
                     ADWDLLIVDEAHHLEWSETESSIGYQLVERLSQQIPAVLLLTATPEQLGQESHFARLA
                     LLDSDRFYDYAEFVQEQAQYKPVADAVSSLLSDKPLSNDEQNAIAELLSEQDTEPMFR
                     AINSKKSDENDRLQARQELISELIDRHGTSRVLFRNTRQGVKGFPHREYHQISLEMPK
                     QYQNALKVMGMMGSVSQSDLLYPEYLFQRMNPNAKWAEFDPRIDWLITFLKNHRDEKV
                     LVICKQADTAIALEQVLREREAIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSS
                     IGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQIYVPCFNLSAQQMLA
                     EWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPELSAQFDDFVAKTYKRQQYLKAE
                     LEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNFALSLFDVIGVEQEDLGEQSI
                     VISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLTWDHPMIRNGIDLITSGDI
                     GKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPPTPIRVLVDNKGNNIAP
                     QVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQVQQVIETAKFEANS
                     KLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLDSLRVIVSNKA"
     gene            19272..19568
                     /locus_tag="PXB09_000082"
     CDS             19272..19568
                     /locus_tag="PXB09_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5232245.1"
                     /translation="MYIDLQYAVPLLFEYDPNKSQINLAKYGIDFEQAKLLWEDERKV
                     VLEACIEPELRYFLIGKIYDKYWTAFFTPRNDVIRLISVRRSRKKEISYYEKYH"
     gene            19552..19794
                     /locus_tag="PXB09_000083"
     CDS             19552..19794
                     /locus_tag="PXB09_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HDL5232246.1"
                     /translation="MRNTISAEELERIFDEGKEDILQYCDLSTAHRPGQMKRVNVDFP
                     NWMVEALDKQARHLGVPRQALIKMWIAEKLPVQSPR"
     gene            19806..20474
                     /gene="rluA"
                     /locus_tag="PXB09_000084"
     CDS             19806..20474
                     /gene="rluA"
                     /locus_tag="PXB09_000084"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDL5232247.1"
                     /translation="MALIEYNPPLEPFLDEVYRDNHILVINKPSGLLSVPGNRPEYYD
                     SAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYIALLWG
                     KLGEKVGDKGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHYPNNIARVKLTPI
                     TGRSHQLRVHSLALGHPIIGDKFYANPLAKSLSPRLCLHAESLTITHPITRELMTFTA
                     EPTF"
     gene            complement(20452..21027)
                     /gene="ampD"
                     /locus_tag="PXB09_000085"
     CDS             complement(20452..21027)
                     /gene="ampD"
                     /locus_tag="PXB09_000085"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDL5232248.1"
                     /translation="MPNLKIEQGCLTGQKQVPSPHFSQRPDQEDISLLVIHYISLPPE
                     EFGGNFIDLFFQGKLEPTAHPYFEEIKDLRVSAHCLINREGEITQYVNFNDMAWHAGV
                     SCFEGREKCNEYSIGIELEGSNNQPFTQAQYQSLANLTKAIQQSYPQITDERITGHCH
                     IAPERKIDPGQYFDWAYYKHLLNEAKKSAQQ"
     gene            21087..21929
                     /locus_tag="PXB09_000086"
     CDS             21087..21929
                     /locus_tag="PXB09_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDL5232249.1"
                     /translation="MLSYRHSFHAGNHADVLKHIVQLLILRALKEKEKGFLYLDTHSG
                     VGRYSLLSFESEKTGEYLEGVARLWERDDLPEEVAFYIDELKKLNRGGKLKYYAGSPL
                     LAVQQLREQDRAILTELHPNDFPLLRQEFAKAKNVQTKRENGFQQLKSALPPKERRGF
                     VLIDPPYELKEDYELVVKAIEEGYKRFATGVYAIWYPVVLRQHTKRIVRGLMDTGIRK
                     ILQIELAVRPDSDQRGMTASGMIVINPPWQLETQMKKILPYLTEVLVPEGTGSWKVEW
                     ITPE"
     gene            22052..22693
                     /gene="pyrE"
                     /locus_tag="PXB09_000087"
     CDS             22052..22693
                     /gene="pyrE"
                     /locus_tag="PXB09_000087"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDL5232250.1"
                     /translation="MQQYKHDFIEFALSRNVLKFGEFTLKSGRISPYFFNAGLFNTGR
                     DLAKLGEYYAKAIQASGIEYDVLFGPAYKGIPIATTVAVALANLFDVDKPCCFNRKEA
                     KDHGEGGNLIGSPLTGKILLVDDVITAGTAIRESMEIINANNAQLAGVLIALNRKEKG
                     KGELSAIQEVERDYGCQVFSIVDFDDLVAFIETSPQYAPYLPKMREYREKYGV"
     gene            22867..23956
                     /locus_tag="PXB09_000088"
                     /pseudo
     CDS             22867..23956
                     /locus_tag="PXB09_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607068.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            complement(24021..25211)
                     /gene="metC"
                     /locus_tag="PXB09_000089"
     CDS             complement(24021..25211)
                     /gene="metC"
                     /locus_tag="PXB09_000089"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDL5232251.1"
                     /translation="MSNYKNLSTKLVHTGRKKRNTQGAVNPVIQRASSLVFETLEEKK
                     HATQNRYKGALFYGRRGTLTHFSLQEAMCELEGGAGCYLYPCGAAAVTNAILAFVEQG
                     NHVLMTGAAYEPTQEFCNALLKRMGVSTTYYDPMIGEGLKALVQPNTKVLFLESPSSL
                     TMEVPDIPTLVRVAREINPEIVIMIDNTWSAGVLFPALEYGIDISIQAGTKYLVGHSD
                     VMIGTAVSNARCWDKLREGSYLMGQMVDADSAYITARGLRTLGIRLKQHEQSSIAVAN
                     WLAQRPEVKAVYHPALESCPGHEFFKRDFLGSSGLFSFELCEKLSNDKLANFLEHFEL
                     FSMAYSWGGFESLILANQPEEIAKIRPAIERKLTGTLIRIHVGLEAVEDLIADLEQGF
                     NRIR"
     gene            complement(25270..25809)
                     /gene="dsbB"
                     /locus_tag="PXB09_000090"
     CDS             complement(25270..25809)
                     /gene="dsbB"
                     /locus_tag="PXB09_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDL5232252.1"
                     /translation="MLYFFKNLSQSRSAWFLLMLSCLILEGTALYFQHGMGLVPCVMC
                     IYERVALFGILFAGILGFLGNRYAIIRYLAILIWLGSAFKGLVLSIKHHDYQVNPSPW
                     NQCEFKVNFPQTLPLDQWLPQVFAPGPVNCSQSQWEMFGFSMAQWLIFTFAVYLIVAV
                     IVLISQFKRSRQRNNFMFR"
     gene            complement(25872..27413)
                     /gene="nhaB"
                     /locus_tag="PXB09_000091"
     CDS             complement(25872..27413)
                     /gene="nhaB"
                     /locus_tag="PXB09_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton antiporter NhaB"
                     /protein_id="HDL5232253.1"
                     /translation="MSSIDALFKSFLGKSPEWYKLCILAFLIINPLIYFFINPFVAGW
                     FLVAEFIFTLSMALKCYPLQPGGLLAIEAVVIGMTNPHHIKEEIMANFDVILLLMFMV
                     AGIYFMKQLLLYIFTKLLVAIHSKKILSLSFCLSAAFLSAFLDALTVIAVIISVGTGF
                     YGVYHKVASGNNFEDSTDITNDEKIISNKEILEQFRGFLRSLLMHAGIGSALGGVMTM
                     VGEPQNLIIASQAEWGFIEFLLRALPVSLPVLICGIATCFLVEKYKLFGYGDRLPSKV
                     WGVLARYSQLKEQKMTKQDRLKMLVQAIAGIWLIIGLALHLADVGIIGLTIIIICTAF
                     CGITDEHTLGKAFQESMPFTALLIVFFSVVAVIIDLKLFEPIIAFVLSAEPHSQLSLF
                     YIFNGLLSMISDNVFVGTVYINEAKTALDAGIIDREQFDLIAVAINTGTNLPSVATPN
                     GQAAFLFLLTSSFAPLIKLSYGRMVYMALPYTIVLSIVGFLGLEFLLPSMTEVMINWG
                     WFITR"
     gene            27570..28295
                     /gene="fadR"
                     /locus_tag="PXB09_000092"
     CDS             27570..28295
                     /gene="fadR"
                     /locus_tag="PXB09_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDL5232254.1"
                     /translation="MGHSDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAER
                     IGVTRTTLREVLQRLAREGWLSIQHGKPTRVNDIWETSGPNIIGTIIKLDKSYLPVVI
                     ANVVSLRTRMAEAYIPEAIYLAPEESAKLFDGLDELENTAAAYAEFDYKLFRQFTFLA
                     NKPVYALILNSFKSMYHQVAKIFFADENNRQLTLSFYRSLLCTCLAKDSEKAAACMAK
                     NRQSSGEIWQKLSANIPESFGQL"
     gene            28310..29380
                     /locus_tag="PXB09_000093"
     CDS             28310..29380
                     /locus_tag="PXB09_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDL5232255.1"
                     /translation="MNEIIFSLEPQDNARLQSLCGAFDEHLALIEKSFNLIIARTGFN
                     FTIQSEDDNHYSATLVQNSVKLIKQLYNETAPIKGKIKELDLEDIHLAIQESRMLLQN
                     QWQAGSQGEIAIKTKRGVIKPRSEHQQAYLRNILSHDISFGIGPAGTGKTFLAVAAAV
                     ESLERQEIRRILLTRPAVEAGEKLGFLPGDLGQKIEPYLRPLYDALFEMLGFEKAQKL
                     MERGVIEIAPLAYMRGRTLNDAFIILDESQNTTTEQMKMFLTRIGFNSKAVITGDITQ
                     VDLPRSQKSGLKHAMEVLKEVPELSFNFFDSKDIVRHPVVAKIVQAYDAWEAVDEERK
                     EQRKLEKLALEQEKILAQAEML"
     gene            complement(29506..31512)
                     /gene="tkt"
                     /locus_tag="PXB09_000094"
     CDS             complement(29506..31512)
                     /gene="tkt"
                     /locus_tag="PXB09_000094"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDL5232256.1"
                     /translation="MTERKVLANAIRFLSMDAVQKANSGHPGAPMGMADIAEVLWRDF
                     LKHNPTNPKWADRDRFVLSNGHGSMLIYSLLHLTGYDLSIEDLKQFRQLHSKTPGHPE
                     YGYAPGVETTTGPLGQGITNAVGIAIAEKTLAAQFNREGHKIVDHYTYAFLGDGCLME
                     GISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTAQRFESYGWQVIRNVDG
                     HNPEQIKFAIENAQAETERPTLIICKTIIGYGSPNKSNSHDCHGAPLGDAEIQAAREF
                     LGWEHAPFVIPAEIYTEWDAKAKGTLAEKDWNAKFAAYEAAYPELAAEFKRRYAGELP
                     ANWEAESKAFIEKLQANPATIASRKASQNAIEAYAPILPEFLGGSADLASSNLTLWSG
                     SKPIRAEHNVDGNYINYGVREFGMSAIMNGIALHGGFIPYGATFLMFYEYAHNAVRMA
                     ALMKQRALFVYTHDSIGLGEDGPTHQPVEQTASLRQIPNLETWRPADQVESAVAWKAA
                     VERKDGPTALIFTRQNLAQQQRTAEQLANISRGGYILRECCEKGSCPDLILIATGSEV
                     DLAMKAADVLDAEGVKVRVVSMPSTNVFDKQDEAYRESVLPRSVTKRVAIEAQLADFW
                     YKYVGFDGRIVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL"
     gene            31870..32082
                     /gene="rpmE"
                     /locus_tag="PXB09_000095"
     CDS             31870..32082
                     /gene="rpmE"
                     /locus_tag="PXB09_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDL5232257.1"
                     /translation="MKQGIHPEYKEITATCSCGNVVKTRSTVGKDLNLDVCGNCHPFY
                     TGKQRVVDTGGRVERFNKRFSIPSSK"
     gene            complement(32137..33192)
                     /locus_tag="PXB09_000096"
     CDS             complement(32137..33192)
                     /locus_tag="PXB09_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5232258.1"
                     /translation="MKSLVIKLFGTKKEKKTFKFSKIESVLLKPIGDAIGDAVVHIAH
                     LEQIKKALPNVKIAVLVTSRNKLIFSQANVVDMILEDKVSTYLSQRGHWDLYLDFKPT
                     FTTKSIILDSILKPKFIINFGKKQKSIYNLDTVKNYDFTTVFPKQVHFADYLNYAIFA
                     DFLEKNQVNYNLNIPNELSSFANTLWQEKKIRLLLNPQGSMREISTQELSELLSMIDK
                     RYVQHISCLLTNTTNSAEYLSKIKAPFEISLAPNSDILGYCALVNSADIVIAVDGGGV
                     HISCALGKKLLSFYANHPANIARWYPKPKKDVETFMVIADKWTEDNNDTRGFSLVAPA
                     KWLNHQFAKLIEKYTAC"
     gene            33240..34271
                     /locus_tag="PXB09_000097"
     CDS             33240..34271
                     /locus_tag="PXB09_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5232259.1"
                     /translation="MNIKATLRKARLVIGKAILDSKNTDLILSEIPNKILFLRHDGKI
                     GDYVVSSFVFREIKKQSPQTQIGVVCSQKNRYLFENNPYIDKLYLVKTKSIPDYIRGG
                     KQLAKEQYDVVIDPTVTLRNRDLLFLRTISAKHYVGYQKQKYRLFDLNVEDRKQHFSE
                     IYQDALALIGFENIETQYDVPLNATSNQSIKHYLYENQIRNYIALNLFGAGSARRFSE
                     QKINELLSCLKQHSDKPIVLLTFPEVTAKLCSFTKKYKNIFVYEKTKSVFDSIELIRF
                     ADLLISPDTATVHIASGLSKKIIAFYSSDEQNFIHWHPNNQAETHILRFRKSVNDLDF
                     AAIKPEWLK"
     gene            34273..35163
                     /gene="ilvY"
                     /locus_tag="PXB09_000098"
     CDS             34273..35163
                     /gene="ilvY"
                     /locus_tag="PXB09_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDL5232260.1"
                     /translation="MDFQSLKLFLDIAQSRSFIRSAEKNYMTASTLTRHIQRIEEELG
                     QPLFLRDNRQVRLTEAGERFLAFAQQGWAEWQQLQNQLSPAQGDLEGELKVFCSVTAS
                     YSHLPPILGKFRQKYPKVDIKLSTGDPALALEQVQSLAADISVAGKPEFLPNNIVFHY
                     IDDIQLSIIAPRVASQATQFLQQSPIDWKNIPFILPVNGPVRKRIDRWFKEQKIKDPI
                     IYATVSGHEAIVPMVALGFGVALLPDIVIKHSPMNNQVSYVNLPSPITPFELGICVQQ
                     KRLQEPIINAFWQLLSDNSA"
     gene            complement(35297..37699)
                     /gene="lon"
                     /locus_tag="PXB09_000099"
     CDS             complement(35297..37699)
                     /gene="lon"
                     /locus_tag="PXB09_000099"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDL5232261.1"
                     /translation="MAPRKKKAIELPLLPLRDVVVFPYMVMPLFVGREKSIQALRSAM
                     DSNKQLFLVTQQDPNKEEPNAEDMYGVGVIANIIQMLNLPDGTVKVLVEGQTRAKIEQ
                     IHDDENGFWAAIQPIYSEYDDENEELKAIAKTTLTEFENYVKNNKKIPAEIIAKLQKI
                     TLEDRLADTIASNLIAPVKKKQELLEQPNLIARFEALLIAMATEMDTLETETRIRNRV
                     KQQMEKNQRDYYLNEQIKAIQKELGNGDDVEQSELDKLKEKIDAAKLPTEVKDKLNTE
                     FKKLKAMPQSSSEATVVRGYIDWILQMPWHKKSAVKKDLAQAQEILDKDHYGLERVKE
                     RIVEYLAVQSRLNKLKGPILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAE
                     IRGHRRTYIGSMPGSLMMKMAKVGVRNPLFLLDEIDKMAQDMRGDPASALLEVLDPEQ
                     NKAFNDHYLEVDYDLSDVMFVATSNSMNIPPALLDRMEVIRLSGYTEDEKMHIARGHL
                     LAKQQENNGLKEGELTIEDSAILSIIRYYTREAGVRSLEREIAKICRKAVKALVLDKK
                     LKSITVSEKNIEEYLGVKRFDYGKMDSQNRIGEVTGLAWTEVGGDLLTIETASVAGKG
                     KFSYTGSLGDVMKESIQAAMVVVRSRAEKLGIAEDFHEKRDIHVHVPDGATPKDGPSA
                     GIAMCTALISSLTGNPVRKEVAMTGEISLRGKVLPIGGLKEKLLAAHRGGITTVIIPK
                     ENEKDLEEIPENAKAALDIHAVETIDEVLALALENPPMGIEILSKAEIKVKKSRAKAT
                     VQ"
     regulatory      37903..38021
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            38197..39294
                     /gene="ribD"
                     /locus_tag="PXB09_000100"
     CDS             38197..39294
                     /gene="ribD"
                     /locus_tag="PXB09_000100"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDL5232262.1"
                     /translation="MTDVQYMAYAITLAEKARGWTSPNPLVGCVIVKNGNIIAEGYHQ
                     KAGSWHAERNAILNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRD
                     PNPLVSGKGAAQLRAAGIEVVEDFMRTECDALNPIFFHYIQTKRPYVLLKYGMTADGK
                     IATYTGNSKWITGEAARANVQKSRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIV
                     CDSQLRTPLDSQLVQTARQYRTIIATLNNDAKKQAEYTACGVEILVTGERDKRVDLAD
                     LLQKLGELGIDSLLIEGGSQLNFSVLEQGLVNRVHCYIAPKLIGGKAAKTPIGGKGIG
                     ELAQAVKLRLKSTELLGEDILLDYEVDLLRN"
     gene            39511..40158
                     /gene="ribE"
                     /locus_tag="PXB09_000101"
     CDS             39511..40158
                     /gene="ribE"
                     /locus_tag="PXB09_000101"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDL5232263.1"
                     /translation="MFTGIIEEVGQIAQIKKQGEFVVVTVKAKKILTDVHLGDSIAVN
                     GVCLTVTSFTQEQFTADVMSETLKRTSLGELSINSSVNLERAMAANGRFGGHIVSGHI
                     DGTGVVAEITPADNSTWYRIKAEPKLMRYIIEKGSITIDGISLTVVDVDAESFRVSII
                     PHTIKETDLGTKKIGSLVNLENDIVGKYIEQFLLKKEPENPQSKITADFLKNAGF"
     gene            40177..41376
                     /locus_tag="PXB09_000102"
     CDS             40177..41376
                     /locus_tag="PXB09_000102"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDL5232264.1"
                     /translation="MFKFSTVEEAIQAIAQGKIILVSDDADRENEGDFICAAEFATPE
                     NINFMAKYGKGLICTPISTEIAKKLNFHPMVLENEDNHQTAFTVSVDHIQTGTGISAF
                     ERSLTCLKMLDENAKPEDFRRPGHVFPLVAKDGGVLVRNGHTEATVDLARLAGLKPAG
                     LCCEIMAEDGTMMQMPELQAFAQAHNMPFITIQQLQEYRRKHDSLVNVVSVVKMPTKY
                     GEFKAHSFVETISGKEHVALVKGDIGDGENVLCRIHSECLTGDAFGSQRCDCGQQFAA
                     AMNQVEQEGRGVVLYLRQEGRGIGLINKLRAYELQDRGMDTVEANLALGFKDDEREYY
                     IAAQMFEKLGVKSIRLLTNNPAKIEGLIEQGLNVVAREPIMVEPNEHDLEYLKVKQHK
                     MRHMFNF"
     gene            41582..42046
                     /locus_tag="PXB09_000103"
     CDS             41582..42046
                     /locus_tag="PXB09_000103"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDL5232265.1"
                     /translation="MATFQGNYIATGLKFGIVATNWHKIFIDQLLNGATDKLLRHGVE
                     EKNIDTVWVPGALEISIAAKKMAQSGRYDAIICLGAVVRGATSHYDVVVNESAKGISS
                     SALETGVPIINGILTVENLEQAIERSGTKAGNKGEECAMVAIEMANLLKALA"
     gene            complement(42092..43600)
                     /gene="lnt"
                     /locus_tag="PXB09_000104"
     CDS             complement(42092..43600)
                     /gene="lnt"
                     /locus_tag="PXB09_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDL5232266.1"
                     /translation="MNFAKNPPFLTACLLAIILGAIGTFAYSPFDIWILAFASAAGLV
                     WSATLANRKTALWATFAWSIGYFCTGVNWVSVSMTQFGGVPTIVSYIAVFLLACYLAI
                     YNLLFSVVSHRLKLNNPFALAAIFTFTEYLRGVVFTGFPWLQFGYSLIDSPFAGIAPI
                     LGVEGLTFLVIVASSYLVKIIQQENKTVPSLMVLAVIFGLSFATRFLQFVQIDTEKQP
                     LVVSLVQGNIEQKMKWDPQHFNHSVRTYEQLILPLLGNSELIILPESAIPALENQISP
                     LLGSLDHLARQHGSEIIIGTLYQNEQEELFNSSVLLGEKEREYALHSNPRYNKHHLVP
                     FGEYVPFGSVLDWMREVFILPINLSQGSFVQPSFLAKNNRFNMAICYEIIFGDQLQQN
                     QKSQNSDYLLTITNDAWFGSSIGPWQHFQMARMRALELGKPLLRAANTGITAIVDANG
                     KVIEQLPQFTADALTATIVPTKGDTPFKQLGHWLIYSFSLFCVIASLLLRRK"
     gene            complement(43659..44558)
                     /gene="corC"
                     /locus_tag="PXB09_000105"
     CDS             complement(43659..44558)
                     /gene="corC"
                     /locus_tag="PXB09_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249295.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDL5232267.1"
                     /translation="MSDEQQSVNTTEKSEKKSILHSLFSGLFQNEPKNREDLVEVIRD
                     SVENELIDSDTKEMIEGVMEISELRVRDIMIPRAQIVFIDANEPLDVCIDLIIESAHS
                     RFPVIRGEKDTIEGILHSKDLLKYLRSDSEPFNLQQVLRPAVIVPESKRLDRMLKEFR
                     SERFHMAVVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEVKPIRQLSRHTYAVLPL
                     TDIKKFNEFFATDFNDEEVDTIGGLVMQAFGYFPKRDEQIELNGIDFKVTSANSRQLI
                     QLRVTLSDEQLEKMEKTSPNEEE"
     gene            44696..45304
                     /locus_tag="PXB09_000106"
     CDS             44696..45304
                     /locus_tag="PXB09_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDL5232268.1"
                     /translation="MKLTKIALSLTALVVSSMSVAGTLSTSSMVDILAFDGQRVKSGT
                     TSVQMSENKTHQVVVEVGGTVEGDFFTSDQIILTFQGSAENAKLETPRLNSKLDLRKF
                     QENQTVAIKTDSGKVISHKQDFLKGEGFLAKTRVEDNLTKYNLAKKTASVEQFATAPL
                     EAKGQIVVDTNKVSQEELQLLFRKADKDTQKRFLEWAKKNIK"
     gene            complement(45385..45768)
                     /locus_tag="PXB09_000107"
     CDS             complement(45385..45768)
                     /locus_tag="PXB09_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232269.1"
                     /translation="MKTLKLGCIFSLALMLSSCTLTPEQQAERKAKQIRAEQDLQVQL
                     AKQCDVETAELMYQQFNPPLSQTEQEEKAFKKRYAEKVNAPMFQACYKLAWQNYKAQV
                     ELEEIRWNYDRDYMYRGWRYCYYCW"
     gene            complement(45798..46367)
                     /locus_tag="PXB09_000108"
     CDS             complement(45798..46367)
                     /locus_tag="PXB09_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDL5232270.1"
                     /translation="MNETTINDFSLLCRLFGNLFYRHPTDPILAGTFNWLAQGGLRQV
                     WALNTDSQSENALTLLQKNANPTQLAASYQALFAENGAISPTISAYGLSVNNFVAFRQ
                     ERAMPELENADHIGLLFLTASWIEDNLDSALAQKILFEQFLLPCAGKFLGKIEAFDNG
                     FYKALAQLSRDALSAMADELEESELEAVE"
     gene            46426..47271
                     /gene="nfo"
                     /locus_tag="PXB09_000109"
     CDS             46426..47271
                     /gene="nfo"
                     /locus_tag="PXB09_000109"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDL5232271.1"
                     /translation="MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPAL
                     KAETIEKFKRFCKVHHFSAEQILPHDSYLINLGNPEAEALEKSRVAFIDEMSRANQLG
                     LKLLNFHPGAHLKQISEQDCLARIAESINIAVEKVPNVIAVIENTAGQGSNLGWHFDH
                     LATIIEQVEDKSRVGVCLDTCHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLRGMHLN
                     GSKTPLGSRVDRHHTLREGTIGTEVFAFIMQNMHFNHIPMILETISPEIWADEIKFLR
                     TLELK"
     gene            47399..47971
                     /locus_tag="PXB09_000110"
     CDS             47399..47971
                     /locus_tag="PXB09_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5232272.1"
                     /translation="MKKNLFATTFKPVFIASILSVFGGYSSIAVASLSSKPATPNQII
                     ASKAERLAKSSSVFTNRANLPTSSAHTANYSGRINSVYHNWVGTRYRLGGTTKAGIDC
                     SAFVREVMGKAFSKDMPRSTAEQRHVGHSISKSDLRPGDLVFFRKNNHVGVYIGNGKF
                     VHASSSRGVTTSSLSESYWSRNYTQSRRVI"
     gene            complement(48038..48496)
                     /locus_tag="PXB09_000111"
     CDS             complement(48038..48496)
                     /locus_tag="PXB09_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5232273.1"
                     /translation="MASIRQISDQTAAYQPIPLYRDFNSSRSVKLDLNSLCIKRPRDT
                     FFIHVKNPNLIAWGIELDDLLIVEQTNQYLVNDLLVLEKDGEYKFYQFFNEIQNGEGI
                     AEKILFSLDVSESNLRITDWAEVKIAGVITNVVHQMRTRGAFTQAKQRVA"
     gene            complement(48670..>49041)
                     /gene="grcA"
                     /locus_tag="PXB09_000112"
     CDS             complement(48670..>49041)
                     /gene="grcA"
                     /locus_tag="PXB09_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDL5232274.1"
                     /translation="VQITESSNSNLLNSFWLLDEAKNEARCLAAKAGFEEDQVVAISE
                     LGDIAYREVPVNVAPTIKVEGGQHLNVNVLRRETLEDAIQNPEKYPQLTIRVSGYAVR
                     FNSLTPEQQRDVITRTFTESL"
BASE COUNT        14363 a         9603 c        10675 g        14400 t
ORIGIN      
        1 aatcttgttg tgttactgtt tcccatcgct aatatagcat agcttgttag ataattcttt
       61 aaaggagatt actatggcta tgccatctca acgtttttct cttacttggg tactaaattt
      121 atttggtact gcggtaggag ccggcgtttt atttttgcca attaatgcag gtatgggtgg
      181 gttctaccca cttattatta tgactttgtt agttggacca atgacatatt tagctcaccg
      241 tggcttaaca cgttttgtgc tttcttcaaa atacaaaggg agcgatatta cggctgttgt
      301 tcgtgaacat tttggtgaac aggccggtaa attgatcacg ctactgtact tctttgccat
      361 ttttccgatt ttactgattt atggtgtagg tattaccaat accgtgagtt cttttatgga
      421 gaatcagctt catatcgcgc caccatctag ggctgtatta tcgtttatgc taatagctgc
      481 tatgatcgga gtaatgttat taagtgagca agtcatgtta aaaatcacaa cttgtcttgt
      541 gtatccatta gtgttgattt tattgggctt atctatttat ttaattccac agtggaatac
      601 agctgcctta cagcaaatgc caactacagg agacttcctt actacacttt ggctgactat
      661 tcctgtttta gtctttgctt ttaaccattc accggctatt tcttcttttg cactttctca
      721 acagaaatat taccaagatg acaagaaggc tgaaattgaa tcagctaaag tattacgttc
      781 taccgccttt atcttggtgt tatttgtgat gttctttgta tttagctgtg tattaacttt
      841 gacacctgaa gaattagcac aagctaaagt gcaaaatatt tcgattcttt cttaccttgc
      901 gaataaattt gataatccga ttatttccta ttttggaccg ttggttgctt ttttggcgat
      961 tggtagctct ttctttgggc attatttagg tgcgcgcgag gggttagaag gattggttaa
     1021 tcaaatgcgt aaagagccga ttgatccaag caaattccgc aaaattaccg ctattacttt
     1081 tttgatcatt ttatggattg ttgcgactat caatccaagc attttaggct tcattgaaag
     1141 ccttggtggg ccgattattg cgatgatctt gtttattatg cctgtctatg ccgtatataa
     1201 agtaccggca cttgcacgtt ttaaaggtga atttggccat ttatttgtgc ttgttatggg
     1261 ttgtattgct atttcagcaa tagtatatgg gttactgtaa tctttctaaa atcaatgtag
     1321 aatacgccct tttattttct atgtgaattt gtgtttatga ttagtgtatt tgatatgttt
     1381 aaagtaggga ttgggccttc cagttcccat actgcggggc cgatgaaagc ggcaaaggaa
     1441 tttgtcgatg aattacaaaa tcgcaaattt ttaaacaaaa ttgaccgctt gcgggtagat
     1501 gtctatggtt cattatcact caccgggcga ggacataata cggatattgc catcataatg
     1561 ggattaatgg ggtatttgcc tcataatgtg gatattgaac gtattgagca gacgattgaa
     1621 aatctaaaac aaaataagca acttatcatt gctgaaagca gtgttgagcc taaagtgatt
     1681 gcgttcgatt tttatgagga tatgccattt catcgagatt tcttacctcg gcacgaaaat
     1741 ggtgtgaaat ttagtgcctt gagcggtgaa gagttgctat ttcaaaacac ctattattct
     1801 attggtggtg gctttattgt tgatgaagct aactttgagc aagttaaaaa ttcagatctt
     1861 tctgttccat tcccatatca gaatgcagca gatttacttg cacattgtaa gaataacggg
     1921 ttaccgcttt cttctttagt ctggaaaaat gagcttgctt tacgcagtag agtagaaatt
     1981 tcggattatt tggcaatgat ttggaataca atggaagcct gtattgagcg tggtttgaat
     2041 acggaagggt tactacccgg gcctctgaaa gtggtacgcc gtgccagtgg gctacgcaga
     2101 atgttagagg caaacagtaa attcaatacc gacccaatgc aaattatcga ttgggtgaat
     2161 atgtttgccc ttgccgtgaa tgaagaaaat gcggcaggtg ggcgagtagt caccgcacct
     2221 accaatggag cctgtggtat tgttccggct gtgttggcgt actaccaaaa atttattgca
     2281 cagcttaatc aagatactat tgagcgttat ttattgacta ccagtgtgat tggttcgtta
     2341 tacaaaatga atgcctctat ttccggtgct gaagtaggtt gccaagggga agttggtgtt
     2401 gcttgttcaa tggcggcagc aggtttaacg gaaattatgg gtggcagtgc tgaacaggtg
     2461 tgtatggctg cagaaattgc aatggagcac aatttaggcc taacttgtga ccctgttggc
     2521 ggacaagtgc aagtgccttg tattgaaaga aatgcaatcg cttcagtcaa agcgattaat
     2581 gccagcagaa tggcactacg ccgtacttct tcgcctcagg taagtttaga taaagtcatt
     2641 gaaacaatgt acgaaaccgg caaagatatg aatgcaaaat accgtgaaac ctcaaccggt
     2701 ggcttagcaa tcaaaatttt accttgtgat taattaatga aaaaggctac cttatcaaaa
     2761 taaggtagcc ttttagtttg tagaacatta atgacggaaa tgcctcattc cggttagtac
     2821 cactgccata ccgtgttcgt tggcggcatc aatcacttct tgatcacgca ttgaaccacc
     2881 tgggtgaatc acacaagtaa tccctacttt tgcagcagcg tcaataccat cacggaacgg
     2941 gaagaacgca tcggaagcca ttacacaacc cacaacttgt aagccctcgt cttccgcttt
     3001 aatacctgca atttttgcgg aataaacacg gctcatctgc cctgcaccga taccgatagt
     3061 ttgcccgtct ttggcataca caatcgcatt cgatttcaca tatttcgcca ctttccagca
     3121 gaacaatagg tcttttagct cagcttcagt tggtttacgc tctgaaacca cctttaaatc
     3181 gtcaatagat acagagcctt ggtcggcatc ttgcactaat aatccgccgt ttacccgttt
     3241 gaaatctaag cgttttacag cttctgagaa ctcgccacat tcaagcacac gcacgttttt
     3301 cttagtggct aacacttctt tggcagaagc agaaacggtt ggtgcaataa tcacttcaac
     3361 aaattgacgg tctgcgatgg tttgagcagt ttcgccgtct aattcacggt taaaggcaat
     3421 aatgccaccg aaagcagaag ttggatcggt ttggtaagca cggttgtagg catctaaaat
     3481 atttttaccc aaagcaacac cacaagggtt agcgtgtttt acaatcacac aagcaggctc
     3541 gctaaattct ttcacgcatt caagagccgc atcggtatct gcaatattat tatacgaaag
     3601 ggctttacct tgtaactgtt tggcggtgga aacagaggct tcttttaact cattttcgac
     3661 atagaatgca gcgttttgat gcgaattttc gccataacgc atcgtttgtt tacgcacaaa
     3721 attgaggttt aaggtgcgag ggaattgtcc acttggttgg gttaaatctt cttcctcagc
     3781 cccttgataa ggcggcactt tttgcccgaa atagttggca atcattgaat cgtattgtgc
     3841 ggtatgctca aacgctttaa tagcaagatt aaaacgggtt tctaaagtta aactgttttg
     3901 atgttgatcc atttcggcaa gaatagcatc aaaatcattg ttattgacca caatcgccac
     3961 atctttatga tttttcgctg cagaacgcac cattgtcgga ccaccgatat caatattttc
     4021 caccgcatct tcaaggctac aatttggatt ggcaacggtt tgagcaaaag ggtagaggtt
     4081 tactaccacc atatcaattc gttcaatgcc gtgttggttc atcacttcat catcagtacc
     4141 acggcgacct agaattccgc cgtgcacttt cgggtgcagg gtttttacac gcccgtccat
     4201 catttcagga aagccggtgt aatctgatac ttctgttact agcaaaccgg cttcagccag
     4261 taattttgcg gttccgcccg tagaaagtaa ttttacccca cgagccgata gcccacgagc
     4321 aaattcgaca atgccttttt tatcagacac acttaataac gcctgttgaa tcgccattct
     4381 taaattcctt aaaatgagtg ttaacgtgaa aataaacggc aaagattata acgcaaacgt
     4441 ttgctttttt catctacaag tggtcgattt tgcaaatttt tctgcaaaat cgaccgcttg
     4501 cactcgtgat taaagcgggt agaatagagg aaaaaaatcg gaggaactat gattaaccac
     4561 aatttagcag atttcgtatt tgagtatttt accgaaaaca acctaaaagc aggcacacta
     4621 cgttatcgct acataaaaga gaacgtgatt gatgcttaca gtacccgagt agatgatgcc
     4681 tttcaaggta aaggtattgc aggagagctt tacaatgctt taattgcgtt tgcgcaagaa
     4741 aaagggctga aaatcaagcc aagttgtagt tatattgagg taaaaatgca acgaagtcat
     4801 cgagatttaa ttgcttagag aggagcaagc ggtcgtaaaa tttcaaaaat ttacgaccgc
     4861 tgtcttattc aattctcaaa aatccatcac acaaaatata agccctattc attaaacaac
     4921 gccatataaa acttattttc aaatgtatta agcggagccc gtttggtttt gctttcgagc
     4981 tcgccggtgg aatagccgtt aataaattgc acaaaagcga tgcgttcgcc acgggcgttt
     5041 ttcataaagc cggcaaggtt gtaaacccct ttcagtgagc cggttttggc aatcagattt
     5101 ttggcaagcg gttctgttga aatagagcct ctgccggaaa tagtaccgtc cacgcctgca
     5161 atcgggaagg tttcaaacag ttttaagctt tcttcgtttt gagcgatata ttcaagggtc
     5221 tccagcattg ttcggctgct gacttgatta tgacgggaaa gccctgagcc atcagccacc
     5281 acgctgtttt taaaatcaat attggctttg gtttttaata actggcgaat cacataacta
     5341 cctaattgga acgatgcggg gcggttgtgt tgcttgttgg caacggttct aaacagggca
     5401 tcggcaattt ggttatccga ttttttcatc atttttttca ataataccgg caacggctcg
     5461 gaataatgct cggcaagtag cgtgccgttt tgggcagtaa gtggctcttt tacttgcccg
     5521 ttaaaggcaa ttttcaggct ttttaactgg gctttaagca tatttgcccc gtaattagtt
     5581 gggtcttgca ccgaaaaact taagccgaac ggttgagact ggcgagccat acagcctttg
     5641 atttggtagc ggttgttatc gtgaaccacc acatcaagct ggcaaaacgg agcttctttc
     5701 ggctcgacaa tataagcaga gctaaacacc tgcaccggat aagcggacgg cacattcact
     5761 ttagcaaatt cgccaatggg ttggtcggca tttaaggtga cataaaaaca gttgtgatcc
     5821 acattaattg ccgccggtgg ggcgttaaag cacatcgtca agtcgttcca aatccaaccg
     5881 gaggctttgt cgtggctggc gaaaaccgac gggtctagaa ttaaatcccc ctcaatttta
     5941 ttgatacctt gttgctttaa tttgctcatt aattgataaa tttgaccgct tgtaagctca
     6001 gggtcgccac taaaacgggc aattaaattg ccttttaaca ctccgttttc tacttttccg
     6061 ttggttaaaa gggcagtttg aaagcggaaa tcatcgttta aagttaattt tgctgccagt
     6121 gccgtaaaga ctttttgggt actggcaggt agcataaaaa tatcactttg gtattgggtg
     6181 atgatttggt tagtgtctaa atttttagca ataaaactaa cagaagtacc ggcaggcaag
     6241 gtatttaata attcttcggt attaatttca gcctgtgtaa tgcttggaat cagaagtgta
     6301 gataagataa atttatttaa aaaagcacga gtgaaatttt taaaaatcat aataaaaggg
     6361 gagttgaaat ttttagtgag aaattgaata atagcccttt cgttttaatt cgtaaaccga
     6421 taatttttag taaggaaata gatttaatga aacaaattcc tatgacggtg cgtggtgcag
     6481 agcaactgcg tgaagaattg gattttttaa aaaatgtgcg tcgcccacaa attattgatg
     6541 cgattgcaga agcccgtgaa cacggtgatt taaaagagaa cgcggagtat cacgcagccc
     6601 gtgaacaaca aggtttctgt gaggggcgta ttcaagaaat tgaaggcaaa ttaggcaatg
     6661 ctcaaattat tgacgtcact aaaatggcaa acaacggcaa agtgattttt ggggcaacgg
     6721 tgcagttagt gaatgctgat acagatgaag aagtcactta ccgcattgtg ggtgatgatg
     6781 aagccaatat taaagagggc ttaatttcag ttaattcccc gattgctcgt ggtttaatcg
     6841 gcaaagaggt ggacgattca gtcagcatta ccacaccggg tggcaaagtt gagtttgaca
     6901 ttgttggcgt agaatatatt taatctacgc tagggcgaat tacaatagtg gggcgaaaaa
     6961 attttcgccc ctactttatt aaacaatctc actcggtaca aagaagtagg caatttcacg
     7021 ttttgccgac tcttcggaat ctgaaccgtg taccgaattt tcacgcatac ttaaggcata
     7081 taaatcgcga atggtgcctt tttcacggtt atccggattg gttgccccca ttaatgcacg
     7141 ataatggcta attgcatttt ccccttccag tacagaaacg acaatagatc ctgatgtcat
     7201 aaattccact aacggctcaa agaaatcttt gcctttgtgt tccgcataaa atccttccgc
     7261 ttgctcacgg gtaagatgta ctttttttag agctttgata gtcagcccgt tttcttccaa
     7321 ttgagccaaa attttgccga ttaaattacg gcgtgtagca tccggcttaa taatagaaag
     7381 cgtttgttga atcatcatct tctcctattt aacttgcatt cccggctgaa caccgctgtc
     7441 tgcatctaat aagaacaggt tcgcaccgcc tgtgccggca gataaaatca ttccctccga
     7501 cataccgaac gacattttgc gtggagcaag gttggcaatt acaatcacaa aacgcccgat
     7561 aagtgcttcc ggatttgggt aggccgcctt aatgcctgag aatacttggc gttggtggtc
     7621 gcctaaatcc agctcaaaac gtaacatttt gtctgatttt ggcacagcct cgcagttcaa
     7681 tactttggct gcacgtaaat ctaatttcgc gaaatcatca atcgtaattt cagggctgat
     7741 tggctcaact gcaatatttt cttgtttttc gaccgcttgt tgttccactt tttgtgttcc
     7801 tttggtttgg ttttcggttt tcttattcgc ttcggcaaat aaggctttgg tttcatcaat
     7861 cactgcatca atctgttttt tctcaaggcg tgagaatagc gatttaaacg gtgccacggt
     7921 atgcccgaat aatggggtag cgatattatc ccaacgcaat tcgctttgta agaatgcttc
     7981 ggcacgttct gccagttttg gtaacaccgg ttttaggtag ctcatcagca cacggaataa
     8041 ctcaatgccc attgaacaaa ccgcttgtaa ttcagcctct ttgccttctt ctttggcgat
     8101 gacccaaggg gctttgtcgt caatgtattt attggcttta tcggttaatt ccataatggc
     8161 acgaatagct ttattaaatt cacggttttc atagaaattc gctatggttt ctgcttgagc
     8221 ggtaaattca ttaaataacg cttcgtcatc taatttttca gctaatttgc cctcaaagcg
     8281 tttagcgata aaactggcgt tgcgagaagc aagattcact aatttgttta cgatatcgct
     8341 gtttacacgt tgcacgaagt cgtctaaatt aaaatctaaa tcttcaatgc gatcgtttaa
     8401 ttttgccgca tagtaatagc gtaagcattc cggatcgaga tgttttaaat aggtgttggc
     8461 ttgaatgaat gtaccacgag atttcgacat tttcgccccg tccactgtca cataaccgtg
     8521 agcaaacaca ttggtcggtt tgcggtagcc gctgccttcc aacattgccg gccaaaacag
     8581 gctgtggaag taaacaatgt ctttaccgat gaagtgataa agctcggtgg tggaatcttt
     8641 ttgccaaaac tcatcaaaat caatgcctgc acggtcgcat aaatttttaa acgatgctat
     8701 ataaccaata ggggcatcta accaaacgta gaagaatttg ttttctgcgt ccggaatttc
     8761 aaaaccgaaa taaggggcat cacggctgat gtcccattgc tgtaaaccac tttcaaacca
     8821 ttcttgcatt ttattggcaa tttcaggttg gagtgagccg gaacgagtcc actctttcaa
     8881 cattccctca aagcttggca ggtcaaaaaa gaaatgttct gattctttta ccaccggagt
     8941 tgcaccggaa actgccgagc gagggttgat taaatccatc gggctatagg tagaggcaca
     9001 tacttcacag ttatcgccat attgatcttc ggctttacat ttcgggcagg tccctttcac
     9061 aaagcgatcc ggcaagaaca tatttttttc tgggtcgaac agttgtgaaa tcactttgct
     9121 tttaataaaa ccgttcgctt ttaaggtttt ataaatatcg gtagtgattt ggcggttctc
     9181 ttcgctgtgg gtggaatggt aattatcaaa gctgatatta aaactggcaa aatccgcttc
     9241 gtgatcggct ttggcttttt cgattaactg ctcaggggta atgcctaatt tatcggcatt
     9301 aagcataata ggcgtgccgt gggcatcatc agcacagaca aagtggactt cattgccacg
     9361 catacgttga aaacgcaccc aaatatctgc ttgaatatgt tcaagcatat gacctaaatg
     9421 aattgcaccg ttagcatagg gcaaggcaca agtaacaagc atttttcgtt tttggttagc
     9481 cattcttttt ctcattaaaa ttagggtaaa aattgccgtc tattttagcc caaaagtggc
     9541 aggtttacca gttggcgtga atttattaga gctttgggct aacaagcggt agaatatgat
     9601 gcgctagagg cgaaacattt ttcgcctcaa tttcccaaat gatgatgtgg gcgaaagatg
     9661 tttcgcctct aaacctattt tggataaaaa tagtatgcga caagtaaagt tataccgcta
     9721 ccaactcccc attcaaaccg gtgtagtgtt acgcaagcaa cctttgaaag aaaggcaagg
     9781 ggtgttggtg tgtttgcaag aacaggagaa agtcggctgg ggcgaaattg caccgcttcc
     9841 aagttttagc caagagagcc tagaacaagc tgaaaaccaa gctgtgaatt ggttaaaggc
     9901 gtggcagaaa ggagagcctg aaacgttaga gcagcttttc ccgtctgttg cctttgggct
     9961 aagctgtgcg ttggctgaac tgaataatga attaggcgag caagcgaata accaatcggc
    10021 ggtgctgtgc tatggcgatt tggaaaagtt acacacggca tttagccaac atacgaaccc
    10081 aatcggtaaa attaaaatcg gtctcaatcc tgaacaggaa ggcgagcagg caaatttgct
    10141 gttgcatact tttccgaatt tacgcctaag gcttgatgcc aaccgtcttt ggagcttgga
    10201 acaagcggtc aaatttgctg aaaaaattgc aaatgaacat aaaccccgta ttcaatttat
    10261 cgaagaacct tgccaagcgc tcgaactttc ccgccaattt gccacacaaa ccgacattgc
    10321 gattgcgtgg gacgaaaccg tgagagaggc gaattttttg gtaaaaaaag agccaaattt
    10381 gaccgctatt atcattaaac ctacgctggt tggttcgctt gaaaaatgcg tgaatttaat
    10441 tcaacaagca cagaagcaag gattagtagc ggtgattagt tcaagtcttg agagcagttt
    10501 gggcttaacc caactggctc gtatcgccca acaatacacc ccaaacagtg tgccggggtt
    10561 ggatacgtta aatttaatgc aacaccaatt attgcgagat tggcacgact ctagcttgcc
    10621 gttggtcggg ctagaaagcg aatttgttag ggaagttgtg gtataatctc ccaattaaac
    10681 actctctccc cttgtgggag agagaccgct tatgagcgtt cagcgaaata agcagagaga
    10741 ggggaagcgg tcatttttct aaaaaagttt gcacatttcc cctctccctg atttttcttc
    10801 tggacgaaga cgtatttccc ccctctccct gatttttctt ctagacgaag aaaaatctgt
    10861 ccctctccca cgaggggaga gggtaaagta atttatggta taaaaatagt atgcgtttag
    10921 acaaatttat cgccgaaaat accggtttga cccgttcaca agcggctaaa gtgctgaaaa
    10981 gtggtgtggt gacggtaaac ggcaatattg aaaaaagtgg tgcggcaaaa atcagtcaag
    11041 aagatgaaat ttattacgaa gatcagaaat tagagtgggt ggaagagggg cagtatttta
    11101 tgctctataa gccacagggc tatatttgtt cacacgatga tggtgagtac ccaacggtgt
    11161 ttcaattctt tgattatccg ttaatgacta aattgcatac cgcagggcgg ttagatgtgg
    11221 ataccacagg gctggtgctg ttaaccgatg acggcaaatg gtcgcaccgt attacctcgc
    11281 ccaagcacca ttgtgaaaag acatacttag tgacgcttgc tgatccggtg gaagattttt
    11341 atgcacagcg attggcagaa ggaattttat tgcgtggcga gaaagagcca accttgccgg
    11401 ctcaacttga aattttagac gattacaatg tgaatttaac tattagtgag gggcgttatc
    11461 atcaagttaa gcgaatgttt gccgcccttg ggaataaagt cgaggcattg caccgctggc
    11521 gaattggcga tgtggtgtta gatgaaaggt tggaagaagg tgaattccgc tcgctcactt
    11581 cagaggagat agccagtttt aatggaaagt agaagaccaa gcctgagctt tttcatcata
    11641 ttaggtatga tggcaatgtt gccaccatta gccattgata tgtatttgcc ctcattttta
    11701 gacattgccc gtgacttggc ggtttcgcaa gaaaaagtgc aaaccacctt ggcggtattt
    11761 accctaggtt ttggggcagg gcaactattc tggggaccga tggcagacag ctttgggcgg
    11821 aaaatcatta ttttaatcgg attagtcggc tcggcgattg ccgcttattt tctgacccaa
    11881 gttcagaata ttgaaacatt ttacctgcta aggttagtac agggcttatg tgcggcagcc
    11941 ccggcggtgg tgctgggagc attagtgaga gatctgtttg agcgtaattt atttgccaaa
    12001 ttgatgtcgg ttattatgat tatttctatg cttgccccat tgcttgcacc gattgttggc
    12061 ggttatattg ccaaatattt ccactggcac tcaattttct atgtgttagt ggcgatgggg
    12121 attttgtgcg tggtattaat tagttggaaa atccctgaaa cattagcccc cgaaaaacgc
    12181 ctgccgttaa gttttggcaa aactttaagc aattttgcca tcttactgaa acataggcct
    12241 actcttggtt atgtgctgat tggcggctta acctttgcag gtattttctg ttttttaacc
    12301 tcaggctcga ttgtctatat tgggctttat ggcgtgtcgc aagaaaattt cggctatttc
    12361 ttcgggctga atatgattgt gatggtgacg atgacggcga ttaacagcaa aatggtagtg
    12421 aaagtcggct ctgaaacgat gttacgaatt gctttagcta tgcaactgtt agccggcatt
    12481 tggctggctt tagtggcgat ttttgattta ggcttctggg caatggcaat cggtattccg
    12541 ctttatatcg gaatgctttc caccattggt agtaatgcca gtgccgccat tttagagcaa
    12601 tttccacaaa tggcaggcac ggctaacgga gtagcaggta cggctcgttt tggtgttgct
    12661 tcccttgttg gagcagggct ttcacatatt gctgtaacca gtgctgcccc aatgcttttg
    12721 gcgatggcat tgtgcgttat gttagccggt gtggtgtatt attttctgtg ttataagcga
    12781 taactaggtt ggggttagct tgcgaaaacc caacaaattt ctacaagcgg ttaataatag
    12841 tacatttttt gcaaattttt aggcagaatt aaccgcttgt gtggtacgag cgtggacgct
    12901 cgcaccatcg gggcaatatc tactaagatt ttaaaaacag cgaaatagat tccaaatgcc
    12961 cggtgtgggg gaacatatca atcattgccg ctttttctag cctgtagcct agttgcaaca
    13021 gtttttcggc atctcgcacc agtgttgccg gattgcaaga gacataaaca atccgctcag
    13081 gattgagtga tgtcaagtga tctaggcaaa atagtgctcc gttgcgtgcc gggtcgagta
    13141 gtaccttgtt aaacggctct tttgcccaag gtttgtcaga aaacggctca tctaaattgg
    13201 tttggtaaaa ttccacattt tttagaccgc ttgtcaccgc attctctcgg gcttgttgca
    13261 ccattggttc taccccttcc acaccgacca ccgatttcgc tcgctcagca ataggcaagg
    13321 taaaattccc cattccacag aagagatcta acactcgatc ttggttggat aattccagcc
    13381 actcaagggc tttttccacc attttttcat tgagcgtggc attcacctga ataaaatccc
    13441 gaattgaaaa atgcaacttt agaccctgaa tttgataata cgggcgttca ccgcacagat
    13501 gctcaatgtg attttcgcta gtcatcacaa aaagagataa ttgctcttgt gtggcgaatt
    13561 gacgcaaatt gtggttatct tgcgccgata atgcccctaa atggcggaaa aatagggcaa
    13621 tggtattgtc cgcactgacc agctcaatat gccccaattt tttcggctgt tgccagtttt
    13681 caatcaggtg ttttaatttt gggagcaaat tggcaagcgg ttcaaccagc acttcacagt
    13741 gtgcaagcgg tataatttgg ttggaatttt gcaaacgaaa gccgattacc gccttgcctt
    13801 gctggatcgc aatgcttaat tttgcccgac ggcggtagtg tttatcgttg ccgataatca
    13861 tcggctgaac atcaatagcg tgggtttgca atttctgtaa gcgttggaat aaagcctgtt
    13921 gttttgcctt acgttgcagt tcaagcgaaa tatgctgcat ttggcagcca ccgcattgcc
    13981 cgtaaagttc gcagcttggc attcgccgat ttgcagattt tttaagaatt ttaaccgctt
    14041 gtccacgtcc gtattggcgt ttctcttcca acactttaaa ttccacctgc tcatcaggca
    14101 gggcattttc gataaaccaa gttttgccgt tgattttggc aatccctaag ccttgataat
    14161 ctaacgattg aatagttgcc ttttgacaag cgggtgattt tatcggtttt tttgccgatt
    14221 tttcagaata aaaaatagcc attgttttca gatgaattgt tatgatataa agtgtcgaaa
    14281 tggggagatt atataagaaa agcagttggc ggaaaatgga ggcaatatga tttcatcggt
    14341 ttggaatgaa cgttatttgg cggataaaaa acgggaacaa gatcaccgct cgccttttca
    14401 gcgggatcgg gcaaggttat tgcattcgga ggcttttcgc tgtttgcagg cgaaaacgca
    14461 aattcacgcc gtgggggaag atgattttta tcgaacccgt ttaacccatt cgttggaagt
    14521 ggctcaaatc ggtagcagtt tgcgagaaaa attattagcg gatgtggaag gctttcaagc
    14581 ggtctgttcg gagcaggaat ttgcaaaaaa tatggcaaat ctgaccgctt tattgccgga
    14641 tcatagcttg gtggaatccc tttgttttgc ccacgatctc gggcaccctc cgttcgggca
    14701 cggtggtgaa atggcgttaa attataaaat gtacgccttt ggcggcttcg agggtaatgc
    14761 tcaatccttt cggattatga cccagcttga gccttacacc gaaacagccg gaatgaatct
    14821 gacccgtcgc accttactgg gggtaatgaa atatccggca ctcttgtctc aaacctcgcc
    14881 gattgagccg gcagaaatga gcgaggctcg gcatattaat ttgcaccatt ttccacagag
    14941 caaagggatt tttgatgaca acaaccactt ttttgagtgg gtattagccc cgttaagtga
    15001 aaaagaccga cgccaatttt gcacggttca gcccaatcaa gatccgaaac agccaaacaa
    15061 aacgcaatat aaatctctcg attgcagcat aatggaacta gcggacgata ttgcctatgg
    15121 cgtacacgat ttggaagatg cgattgtagg tggaatggtc acaccgcaat cgtggcaaaa
    15181 tgcggaaaaa ttgctggcgg agtgccaatc cgattgggtg aaacaacgcc tgccggagat
    15241 tcgggaaaag ctcttttctc agcaccgcta cgagcgaaaa gatgtgatcg gggcattagt
    15301 gaatcatttt attaccaatg tgcgttggaa agctctgcct gaatttgacg agccgttgct
    15361 acgttataat gcctatttac cggaaagtgt tgcctgtgtg ctgaaaatct tgaaagattt
    15421 tgtgtatcaa tatgtgattt gtgatgccaa aacccagcgg gtggaacgca aggggcaacg
    15481 cattctaatg gaattgttcg atattttaag cagtgatccg atgcgattac tccctaataa
    15541 tgtgcgggaa cgttggaaaa atgcggaaga atctaagcgt gcaagggtaa tttgcgacta
    15601 tttagccggt atgtctgatg ggcaggcgtt taaacttttt gaaagtttat aatgaacttt
    15661 gttaattttg caaggtctca gtaataggtt tcatttattt aataggagat ttcaatgaaa
    15721 actgtttcta aaggtctttt agtattagca actttggctt ctgcaacagc atttgcggtt
    15781 tcttccaagt gaaatttatc agcctcgtgg cgaattagtt aaagcagatc gtcaaggtaa
    15841 tggtgagttt gaagtagaat atcgtgtcag tggtaatgat gttcgtggct tagcgaaaag
    15901 tgcgatcgcc cacgctaaac gtaaaggttt ccatttagta gaatctgata ttcatagaga
    15961 tgatgctgat ttaaaattca aacgtggtga ccaagagctg gatattgaaa ttgaagtaaa
    16021 aggtagaaat cggattgaat ataaggcaga tctagattta gataaaaact aaatttaccc
    16081 cttaaaacga ccgcttgtgt gatttaaccg cacaagcggt ctttttattg tgcttttttg
    16141 caaaaatact caagccgacc ggtcccggaa tttggtaaaa tagccgttta aatgacaata
    16201 atgatgcttt tacttattac ttagaggaaa aaatgttttt agtcggtcag cgttggctaa
    16261 gtgaatcgga aaataattta ggtttgggaa tcgtgacttc ggtggatcat cgcactgtca
    16321 ctatcaattt cccggcagcg gaagaagagc gggtctatgc aattgcagtt gcacctttaa
    16381 ctcgagtgca gtttcaagcc ggagatagaa ttaacagtat agatggctgg cagttagagg
    16441 tttcagaggt tgtggaaaat caaggtgccg taatctattt gggcaaaagg gtggataacg
    16501 gtgaagaagc ggtactgcct gaaatgttgc tcgatcataa aatcagtttc agcaaaccgc
    16561 aagaccgcct tttttcggct cagattgatc gctcagatcg ctttgcatta cgctttaacg
    16621 ctttgcagca ccagcaagcg caatatcagt cgccactgcg tggtttgcga ggcattcgag
    16681 ccagcctgat tccacatcaa ttacatattg caaaagaagt cgggcaacgc cttgctcctc
    16741 gtgtgctatt agccgatgaa gtgggactgg gtaaaactat tgaagctggt atgattttgc
    16801 aacaacagct attttcgggc agagcagaac gagtattggt attagtgccg gaaagtttgc
    16861 aacaccaatg gttggtggaa atgcttcgcc gttttaatct gaaattctcg ttattcgatg
    16921 aagaacgttg tagtgatttt gataaacaag atgaaaatgg cgatgatgta agtgaaaatc
    16981 catttgagag cgaagcgtta gtcattactt cactaaactg gctggaaacc tcaccgcaac
    17041 gagccaatca agtgcttgct gccgactggg atctattaat tgttgatgaa gctcaccatt
    17101 tagaatggtc ggaaaccgaa tcttctatcg gctatcagtt ggtagagcgt ttatctcaac
    17161 aaattcctgc cgtcttgctt ttaacggcaa caccggagca attagggcaa gagagccatt
    17221 ttgcccgctt ggcgttgtta gattcggatc gtttttatga ttatgccgag tttgtacagg
    17281 agcaagcaca gtataaaccg gtggcagatg cggtgagtag cttattaagc gataaaccgc
    17341 taagtaatga cgagcagaat gcgattgcgg agctgttaag cgagcaagat accgagccga
    17401 tgttccgtgc aattaatagc aaaaaatcgg acgaaaatga ccgcttgcaa gcccgtcaag
    17461 agctgattag tgagctaatt gaccgccatg gaaccagccg ggtgttgttt agaaataccc
    17521 gtcagggagt gaaaggcttc ccacatcggg aataccacca aatcagccta gaaatgccga
    17581 aacaatacca aaatgcgtta aaagtgatgg gaatgatggg gagtgtgagc caaagtgatt
    17641 tgctctatcc tgaatatttg ttccaacgaa tgaacccgaa tgcgaaatgg gctgaattcg
    17701 accctcggat tgattggctc atcactttct taaaaaatca tcgtgatgaa aaagtgctgg
    17761 tgatctgcaa acaggcggac actgcgattg ctttggagca agttttgcgt gagcgtgagg
    17821 cgattcgttc tgccgttttc cacgagaaaa tgtcgattgt tgaacgtgac aaagctgccg
    17881 cctattttgc tcaacaagaa gaaggcgctc aggtgctgat tagttcaagc atcggttcag
    17941 aagggcgaaa tttccaattt gctaaagatt tagtgctgtt taatttgccg gataacccgg
    18001 atttattgga gcaaagtatt gggcgattag atcgtatcgg acagaaaaat gacattcaga
    18061 tttatgtgcc ttgctttaat ttatcggctc aacagatgtt ggcagagtgg tatcacaagg
    18121 gcttgaatgc gtttgaagaa acctgcccga tgggaacagc gatcttccgt gaattaggtg
    18181 aagaattgca acaattcctg caaaaacctg aactttcagc ccaatttgat gattttgttg
    18241 cgaaaaccta taaacgccaa cagtatttga aagccgaact ggagaaagga caggacagat
    18301 tattagaact gaattctaat ggcggagaag cagctcaaca gctcgctaat gatattgcga
    18361 aagaagataa taatccgcag ttggttaatt ttgccttgag tttgtttgat gtgattggcg
    18421 ttgaacagga agatttaggc gagcagagca ttgtgattag cccaaccgga catatgcttg
    18481 tgcctgattt cccggggcta tcggaagatg gcacgaccat tacctttaat cgtgaactgg
    18541 cgttaatgcg ggaagaggtg gaatttctca cttgggatca cccgatgatc cgcaatggta
    18601 ttgatttaat cacctccggc gatattggca aatcagcaat ctcattgctg gtgaataata
    18661 aattgcctgc cggtacatta ttacttgagg cgctttatgt ggtggaagca caagcaccga
    18721 aagggctaaa tttaacccgt ttcctaccgc caaccccgat tcgggtttta gtggataaca
    18781 aaggcaacaa tattgctccg caggtctctt ttgccgggct tgaacgccaa ttaaaaccgg
    18841 tgaataaaca gatggcaaat aaaattgcca aaatggctcg agcggatatt gaaaaattaa
    18901 ttaaagcgag tgaaaaagcg gtagaacctc aggtccaaca ggtgattgaa actgccaaat
    18961 ttgaggcaaa tagcaaatta aaagcagaat tacaccgctt ggaatcactc aaaatggtga
    19021 ataaaaatat tcgagccgat gaagttgaag ccttagaaca acagcttaac gcttcccttg
    19081 cccaacttga aacggcaaat tatcgcttag atagcttgcg agtgattgta agtaataaag
    19141 cgtaattttt tgcaagtacg aaaagtgatt ttttcgatct gtgtcgaaaa aatcactttt
    19201 ctattttgtg tcatccttgc agattattta tgctattcct catattgtaa aaggtataaa
    19261 aaaggaatat tatgtatata gatttgcaat atgctgtgcc gttattgttt gaatacgacc
    19321 cgaacaaaag ccaaattaat ttagccaaat atggtattga ttttgaacag gcaaagttgc
    19381 tttgggaaga tgaacgaaaa gttgtactgg aggcttgcat tgaacccgaa ttacgctatt
    19441 tcctgattgg caagatttat gataaatatt ggacagcgtt ttttacacca agaaatgatg
    19501 ttattcgttt aatttcagtt agacgttccc gtaaaaaaga gatctcatac tatgagaaat
    19561 accattagtg ccgaagaatt agaacgtatc ttcgatgaag gcaaagaaga tattttacaa
    19621 tactgcgatc tttctaccgc tcatcgcccg gggcaaatga aaagggtgaa tgttgatttc
    19681 ccaaattgga tggtagaagc gttagataag caagccagac atttaggtgt gcctcgccaa
    19741 gccttgatta aaatgtggat tgcggaaaaa ttaccggttc aatcacctag gtaagcgagt
    19801 ggcaaatggc attaattgaa tataaccctc cattagaacc atttttagat gaggtttatc
    19861 gggataacca tattttagta attaataagc ctagtggttt attatcggtg ccgggcaatc
    19921 gtcccgaata ttacgacagt gcaatgactc gagtacagca aaaatatggc tttaccgaac
    19981 cggctcatcg tttggatatg gcaacaagcg gtattctttt gttcgcccta agcaaagcgg
    20041 cggaaaaaga actaaaacgc caatttcggg aacgtgaacc gaaaaaacac tatattgcgt
    20101 tactttgggg caaattaggt gaaaaagttg gggataaggg cgaaatgaat tttccgctga
    20161 tttgcgattg ggaaaatcgc ccccgccaga aaatttgcta tgaacgaggc aaaaaagcca
    20221 ttacccatta tgaagtgtta gctcattatc cgaataatat agcgagagta aaactcacgc
    20281 ctatcacggg gcgttcgcat cagctacgag tacatagcct tgcgttaggt cacccgatta
    20341 ttggcgataa gttttatgct aatccgctgg caaaaagttt atcgccccgt ttatgtttgc
    20401 acgcggagtc actaacaatt actcacccga ttacaaggga gttgatgacg tttactgctg
    20461 agccgacttt ttagcctcgt tcagtaggtg tttgtaatat gcccaatcaa aatattgccc
    20521 cgggtcgatt ttccgttccg gggcaatatg gcaatgcccg gtgatgcgtt catcggtaat
    20581 ttgtggatag ctttgctgaa tggctttggt caaatttgcc aaagattggt attgagcttg
    20641 agtaaacggc tgattattac tgccttccag ttcaatgcca atcgaatatt cattgcattt
    20701 ctcccgccct tcaaaacaag agacgccggc gtgccacgcc atatcgttaa aattcacata
    20761 ttgcgtgatt tccccctccc tattaatcaa acaatgggcg gaaacccgta gatctttgat
    20821 ttcttcaaaa taagggtgag cggttggttc gagtttacct tggaaaaaca gatcgataaa
    20881 atttccacca aattcttccg gcggtaagct gatgtagtga ataaccaaca aggaaatatc
    20941 ctcttgatca ggacgttggc taaaatgcgg agacggcact tgtttttgac cggttaaaca
    21001 gccctgttcg atttttaaat ttggcatagt ctaaataggg tgaatacgtt aaaatatggc
    21061 tcattttact agaaaaagag aagaatatgt taagttatcg ccacagtttc cacgcaggca
    21121 accacgctga tgtgctaaaa cacattgtcc agcttttgat cttgcgagca ttaaaagaaa
    21181 aagaaaaagg ttttttatat cttgatactc actccggtgt ggggcgttat agtctgttaa
    21241 gttttgaatc ggaaaaaaca ggcgaatatt tagagggcgt tgcccgttta tgggagcgtg
    21301 atgatttacc ggaagaagtg gcattctata ttgatgagct gaaaaaatta aaccgtggcg
    21361 gcaagttaaa gtattacgca ggctccccat tattggcggt acagcaactg cgtgagcaag
    21421 accgagccat tcttaccgaa cttcacccca atgattttcc gctgttacga caagaatttg
    21481 ccaaagcgaa aaatgtgcaa accaagcgag aaaatggctt tcaacaatta aaatccgccc
    21541 tgccgcctaa agagcgtcga ggttttgtgt tgattgatcc accttatgaa ttaaaagaag
    21601 attatgaatt ggtggttaaa gcgatagaag agggctacaa acggtttgcc actggtgtgt
    21661 atgccatttg gtatccggtg gtgcttcgcc aacataccaa acgtatagtg cgaggtttaa
    21721 tggataccgg cattcgcaaa attctacaaa ttgagcttgc cgttcgtcct gatagcgacc
    21781 aacgtggaat gacggcaagt ggtatgattg tgatcaaccc accgtggcag cttgaaaccc
    21841 agatgaaaaa aatcctgcca tatttaaccg aggtgcttgt gccggaagga acaggttctt
    21901 ggaaggtgga gtggattacg cctgagtaaa ttaaatacgg atagcacaag cgtggacgct
    21961 tgcgccatca taaattctga tttgcaatat tttttagaaa aataaccgct tgtcttatca
    22021 agaagtgggg gaaatataaa aggaaaaaac gatgcaacaa tacaaacacg actttattga
    22081 atttgcctta agccgcaatg tgctgaaatt tggcgaattt accttaaaat caggcagaat
    22141 cagcccctat tttttcaatg ctgggctttt taacaccggg cgcgatttag ccaaattagg
    22201 cgaatattac gccaaagcca ttcaagccag cggcattgag tatgatgtgt tattcgggcc
    22261 ggcttataaa ggcattccga ttgcaaccac ggttgccgtg gcactagcca acctgttcga
    22321 tgtggataaa ccttgttgct ttaaccgcaa agaggcaaaa gatcacggtg aaggcggtaa
    22381 tttaatcggt tctcccttaa cgggcaagat tttgctggtg gacgatgtga ttaccgcagg
    22441 cacggcaatt cgtgagtcga tggaaattat caatgccaat aatgcccagc ttgccggtgt
    22501 gctgattgcg ttaaaccgta aagagaaagg caagggcgag ttgtctgcga ttcaagaagt
    22561 cgaacgtgat tacggttgcc aagttttctc gattgtggat tttgatgatt tggtagcatt
    22621 tattgaaacg tcgccacaat acgctcctta tttgccgaaa atgcgtgaat atcgtgaaaa
    22681 atacggtgtt taacttttgc aaaaaaacag caaaaactca ccgcttgtca ctctctaatc
    22741 tcaccattat gaatcacttt catcttttgg tgagattttt tcaattaaaa agccgataaa
    22801 ttgattgtga gctttagcta attggcttag gataaactcc tgtaatacag gagttggaga
    22861 actaaaatgg cacatcaaaa attacctttt cacgcagaca ccgttggctc atatttgcgt
    22921 tccgatgctt ggaaaaaagc tcacgcagac tataaagcag gcaacatttc cctcgaacaa
    22981 cgtgatgaaa ttgtagaagc ggaagtgaaa aaattagtac aagcatcaat tagatgcggg
    23041 cattcaagtt gttacagacg gcgaatatca ccgctcttgg tggcatattg atttcttgga
    23101 aaatctgaac ggcattgaag gctatgtgcc ggaaaaagcc tatgcgttta aaggggttga
    23161 ggttcgccct tataatacac gttgttgcgg taaagtgtct tggaatccga atcacccttt
    23221 tattgagcat ttcaaaaaat tcaatgcgat tgtaggtggt cgtgcggtgg cgaaatttac
    23281 cattccaagt ccaaaccaat taatgtaccc gattcagtgg gatcacggca tttacccaaa
    23341 ccgtgaggaa tttgccaaag atgtgcaaca ggcttataaa gaggcgatta aagcgttcta
    23401 tgatgccggc tgtcgttatt tgcaaattga tgatgtctat tgggggtcgt tgtgtaataa
    23461 cgttggtcaa ccgacatttg aagccgataa agctcaagcg gtggcgaata ttcaagccat
    23521 tcttgccgat aagccggaag atttaaccat taccacccac gtttgccgag gcaactataa
    23581 atcttcttat ttattgacag gggcttatga tccgattgcc gacggcttat ttgctcaaac
    23641 caactatgat gggtatttct tagaatatga tgacgagcgt tcaggcggtt ttgagccgtt
    23701 aaaacatttt gccaacaaca aagggcgtgt ggtattgggc ttaattagtt caaaattccc
    23761 tgaattggaa gataaggaag cggttaaagc ccgtattcaa gaagcggcaa aatatgtgcc
    23821 gttagagcag ctttgcctaa gcccgcaatg tggttttgcc tcaaccgaag agggcaatat
    23881 tatgtcggaa gcacagcaat gggcgaaagt tcgtcttgtg gaggaaatcg cccaagaagt
    23941 ttggggcgaa gattaattag agtgaaaaat gcccgtaaca agcgggcatt ttttgtgaat
    24001 tttttgcaaa ttcaagccat ttagcgaatg cggttaaaac cttgttctaa atcggcaatc
    24061 aaatcttcca ccgcttccaa gccaacgtga atgcgaatta atgttcccgt cagtttgcgt
    24121 tcaatcgccg ggcggatttt ggcaatttct tccggctgat tggcaagaat cagcgattca
    24181 aacccacccc aagaatacgc cattgaaaac agttcaaaat gctctaggaa gttggctaat
    24241 ttgtcattcg agagcttttc gcaaagttca aatgaaaata gaccgcttga acctaaaaaa
    24301 tcccgcttaa aaaattcgtg ccccgggcag ctttccaacg ccgggtgata aactgctttc
    24361 acttcagggc gttgagccag ccagttagct accgcaatgc tactttgttc gtgctgtttt
    24421 aagcgaatgc ctaaggtgcg tagcccccga gcggtgatgt aagcggaatc agcatccacc
    24481 atttgcccca ttaaataaga gccttcacgc agtttatccc aacaacgggc gttagaaacc
    24541 gcagtaccga tcatcacatc agaatgcccg actaaatatt tagtgccggc ttgaatggaa
    24601 atatcaatgc catattctaa agcagggaac agcacaccgg cagaccaagt gttgtcgatc
    24661 ataatcacga tttctgggtt gatttcacga gcaacacgca cgagagtcgg aatatcaggc
    24721 acttccattg ttagcgagct cggcgattct aaaaaaagca ctttggtgtt cggttgcaca
    24781 agggctttca agccttcacc aatcatcggg tcataataag tagttgaaac acccatacgt
    24841 tttaacagcg cattacagaa ttcttgtgtc ggttcgtaag ctgcgcctgt cattaaaacg
    24901 tggttgcctt gttccacaaa agctaaaatc gcattggtga ctgccgccgc accgcaaggg
    24961 taaaggtagc aacctgctcc accttctaat tcacacatcg cttcttgtaa tgaaaaatga
    25021 gtgagagtgc cacgtctgcc ataaaataat gctcctttgt agcggttttg tgtagcgtgt
    25081 tttttctctt ctaaggtttc aaacactaaa gatgaagcac gctgaatcac cgggttaact
    25141 gctccttgtg tgttacgttt tttacgccct gtatgaacaa gtttggtgga aagattttta
    25201 tagttagaca taacttttcc taaagtaaaa tgcatagggg caaatcaaca tttgcccctt
    25261 tattaataat taacgaaaca taaagttatt tctttgacgg ctacgtttaa attggctgat
    25321 tagcacaatg accgcaacaa ttaagtaaac cgcaaaagta aagattagcc attgtgccat
    25381 tgaaaagccg aacatttccc attggctttg gctacaatta accggaccgg gggcaaacac
    25441 ttgtggtagc cattggtcaa gcggcaaggt ttgcgggaaa ttaactttaa attcgcattg
    25501 attccatggt gatggattga cctgataatc gtggtgtttg attgaaagta ctagcccttt
    25561 aaatgcgcta ccaagccaaa ttagaattgc caagtagcga ataatcgcat atctattacc
    25621 aagaaatcct aaaataccgg caaataaaat accaaataaa gcaactcgct cataaataca
    25681 cattacacaa ggtactaatc ccatcccatg ttggaaataa agcgctgtgc cttcaagtat
    25741 aagacagctt aacattagta aaaaccatgc actgcgagat tgtgatagat ttttaaaaaa
    25801 atagagcata gttattcctc attttgtgaa cttaaggcat tctaccttat ttggtatgag
    25861 ttatctataa actaacgtgt aataaaccat ccccaattta tcattacttc agtcatagaa
    25921 ggtagtaaga attctaaccc taagaaaccg acaatagata gaacaatggt ataaggtaat
    25981 gccatataga ccattctgcc gtaagacagt ttaattaacg gcgcaaagga ggacgttaat
    26041 aagaataaga aagcagcttg tccgtttggg gtagcaacag aaggaagatt tgtgccagta
    26101 ttaattgcaa ctgcaatcag gtcgaactgc tcacgatcta taatgccggc atctagtgcg
    26161 gttttagctt cattaatgta aacagtaccg acgaagacgt tatctgaaat catcgagagc
    26221 aaaccattga aaatatagaa taatgaaagc tgtgaatgtg gttcggcaga taacacaaag
    26281 gcaatgatcg gctcaaataa ttttaaatca ataatcacgg caacaaccga gaaaaacaca
    26341 ataagcaatg cagtaaaagg catagattct tggaatgctt tccctaaagt gtgttcatca
    26401 gtaatgccac aaaatgcagt gcaaataatg atgatggtta agccaataat ccctacatcg
    26461 gcaagatgta gcgctaagcc aataattaac caaattccag caatggcttg caccagcatc
    26521 tttaagcgat cttgtttcgt cattttttgt tcttttagtt ggctatagcg agcgagtacg
    26581 ccccaaactt tgctaggaag ccggtctcca taaccaaata atttatattt ttctacaaga
    26641 aagcaggtcg caatcccaca aattaacacg ggtaagctaa ctggtaatgc tctaagtaag
    26701 aattcgataa atccccattc cgcttgggag gcaataatta agttttgtgg ttctcccacc
    26761 atggtcatta cgccacctaa agctgagcca ataccggcgt gcatcaataa acttcttaaa
    26821 aaaccacgaa attgctctaa aatttcttta ttagagatga ttttttcatc attggtaata
    26881 tcagtagaat cttcaaagtt attacctgat gcgactttat gatatacgcc gtagaaacct
    26941 gttccaacgc taatgattac agcaataacc gttaaagcat caagaaaggc ggataaaaaa
    27001 gcagcgctta agcagaaaga aagggaaaga atttttttcg aatgaatggc gacaagcagt
    27061 ttggtgaaaa tataaagcaa taattgcttc ataaagtaaa taccggcaac cataaacatt
    27121 aaaagaagaa taacatcaaa gtttgccata atttcttctt taatgtggtg aggatttgtc
    27181 ataccgatta caactgcttc aatcgctaat aaaccacctg gctgtaatgg ataacatttt
    27241 aatgccatag agagagtaaa aataaattca gcgactagaa accagcctgc aacaaaagga
    27301 ttgataaaga aataaatgag aggattgata attaaaaatg ccaaaatgca caatttatac
    27361 cactcggggc tttttcctaa gaaacttttg aacagagcat caatgctact catataaagg
    27421 acctcaaaat ttgtaaacag atattacaat tgtaatatag tttagattaa aggataatag
    27481 tattactgaa ctttttagtc gcaataattg attagaaata aagaatagtt agattttaga
    27541 taagcatatt ttttgcttgg ggggcattaa tgggtcacag tgatatttta aaagcgcaaa
    27601 gcccggcagc gttagcggaa gaatatattg taaagagtat ttggaataat catttccctg
    27661 ccggctctga tcttcctgcc gagcgagagt tagcagagcg cattggggta acaagaacaa
    27721 ctttacgtga agtactacaa cgtctagcgc gagaaggttg gttaagtatt cagcacggca
    27781 agccaacaag agtgaatgat atttgggaaa cttcggggcc taatattatt ggcactatta
    27841 ttaagctaga taaaagctat cttccagtgg tgattgccaa tgtggtgtca ttacgtactc
    27901 gtatggcgga ggcttatatt ccagaagcga tttaccttgc tcctgaagaa agtgctaaac
    27961 tctttgatgg actagatgaa ttagaaaata cagcagctgc ttatgctgaa tttgattata
    28021 agttattcag acaatttact tttttagcca ataagcctgt gtatgcgttg atcctaaata
    28081 gctttaaatc aatgtatcat caagtcgcaa aaattttctt tgctgatgaa aataatcgtc
    28141 aattaacgtt aagcttttac cgttcattat tatgtacttg tcttgcaaaa gatagtgaaa
    28201 aagcagccgc ttgtatggct aaaaatcgcc aatctagtgg tgaaatttgg caaaaattat
    28261 ccgctaatat tcctgaaagc tttggtcagc tttaacagaa ggtagaattt tgaacgaaat
    28321 tatttttagc ttagaaccgc aagataatgc tcgtctgcaa tcgctttgtg gtgcatttga
    28381 tgagcattta gccttaattg aaaaaagttt taatctcatt attgctcgaa caggcttcaa
    28441 ctttacgatt caatcggaag atgacaatca ctattctgct accttggttc aaaatagtgt
    28501 gaagctgatt aagcaactgt ataatgaaac tgccccgatt aaaggcaaaa ttaaggaatt
    28561 ggacttagaa gatatacatt tggcgattca ggaaagccga atgctactac aaaaccaatg
    28621 gcaagccggc tcgcaaggcg aaatagcgat taaaaccaag cgaggggtga ttaaacctcg
    28681 tagcgaacat caacaagcct atttacgaaa tatattaagc cacgacatca gttttggtat
    28741 cgggcctgct ggcacaggca aaaccttttt agcggtagcg gcagcggtgg aatcgcttga
    28801 acgccaagaa atccgccgta ttttacttac ccgtccggcg gtggaagccg gtgaaaagct
    28861 cggtttttta cccggcgatt tagggcaaaa aattgagcct tacttacgcc cgttatatga
    28921 tgccctgttt gaaatgcttg gctttgaaaa agctcaaaag ttgatggaac gtggtgtgat
    28981 tgaaattgcc ccacttgctt atatgcgagg gcgtacttta aacgatgcgt tcatcatttt
    29041 agatgaaagc caaaacacga ctaccgagca aatgaaaatg ttcttaaccc gtattggctt
    29101 taattccaaa gcggtgatta ccggcgatat tacccaagtg gatttgcccc gtagccaaaa
    29161 atcaggctta aaacacgcaa tggaagtgct aaaagaagtg ccggaactca gctttaattt
    29221 ctttgacagc aaagatattg tccgccaccc tgtggttgcc aaaattgtgc aagcctatga
    29281 tgcgtgggaa gcggttgatg aagagcgtaa agaacagcga aaactggaaa aattagcttt
    29341 agagcaagaa aaaattcttg ctcaagctga aatgttatag cttacaagcg gtcatatttc
    29401 gctaattttt tgcaaaaaat cgctgaaatt tcaccgctta tcataacagt tgttcaacaa
    29461 aaaagcggga agttaattcc cgcttttctt tatcttattg tttcattata agatttcttt
    29521 tgctttagca accacgtttt caacggtaaa gccgaagagt ttgaataatt gatctgctgg
    29581 tgcggattca ccaaagctat tcatacctac aattcgacca tcaaagccga catatttata
    29641 ccagaagtca gctaattgag cttcaatcgc cacacgttta gtgactgaac gtggtaatac
    29701 cgattcacga taggcttcat cttgtttgtc aaacacgttg gtgcttggca ttgaaactac
    29761 acgcactttc acgccttctg catctaacac atcagcggct ttcattgcta aatctacttc
    29821 agaaccggtt gcaattaaga ttaaatccgg gcaactgcct ttttcgcaac attcacgcaa
    29881 gatatagcca ccacgagaga tgttcgctaa ttgctccgca gtacgttgtt gttgagccag
    29941 attttggcgg gtaaagatta gtgctgtcgg gccgtcttta cgttctaccg ccgctttcca
    30001 agcaacagca gattctactt ggtctgccgg acgccaggtt tctaagtttg gaatttggcg
    30061 taatgaagca gtttgttcta ccggttggtg ggtcgggccg tcttcaccta aaccgatgga
    30121 gtcgtgtgta taaacaaata aggcacgttg cttcattaag gctgccatac gcaccgcatt
    30181 gtgtgcatat tcgtagaaca ttaagaaggt tgcaccgtaa ggaatgaaac caccgtgtag
    30241 ggcaatcccg ttcataatcg cagacatacc gaattcacgc acgccgtagt tgatgtagtt
    30301 accatctaca ttgtgttccg cacgaatcgg ttttgagcca gaccataagg ttaagttaga
    30361 gcttgctaag tcagctgagc cgccgaggaa ttcaggtaag attggcgcgt aagcttcgat
    30421 tgcattttgt gatgctttac ggcttgcaat ggttgccgga tttgcttgta atttttcaat
    30481 aaaagctttg ctttcagctt cccagttagc cggtaattcg cctgcgtaac ggcgtttaaa
    30541 ttcagcggct agttcagggt atgccgcttc ataagcagca aatttagcgt tccaatcttt
    30601 ttctgctaat gtaccttttg cttttgcatc ccactctgta taaatttcag ctggaatcac
    30661 aaatggggca tgttcccaac ctaaaaattc acgagcggct tggatttcag catcacccaa
    30721 tggcgcaccg tggcaatcgt gagagtttga tttatttggt gaaccatagc cgataatggt
    30781 tttacaaata attaaagttg gacgctcggt ttcggcttgt gcattttcaa tcgcaaattt
    30841 gatttgttct gggttatggc catcgacatt acggataact tgccagccat aagactcaaa
    30901 gcgttgtgcg gtatcatcag tgaaccaacc atcaacgtgg ccgtcgatag agatattgtt
    30961 atcatcgtag aaagcaatca gtttgcctaa gcctaatgta ccggcgagag agcaagcttc
    31021 gtgtgagata ccttccatta aacagccatc gcctaagaaa gcgtaagtgt agtgatcgac
    31081 aattttatga ccttcacggt taaattgtgc tgcaagggtt ttttccgcaa tcgctatacc
    31141 gaccgcattg gtaatacctt gacctaacgg gcctgtggtg gtttcaacac ccggtgcata
    31201 accatattca gggtgaccag gtgttttaga atgtaactga cggaactgtt ttaaatcttc
    31261 aatagagaga tcatagccgg ttaaatgaag taagctatag attaacattg aaccgtgtcc
    31321 gttagacaga acaaaacggt cacgatctgc ccatttagga ttagttggat tgtgttttaa
    31381 aaaatcacgc cataaaactt ctgcaatatc agccataccc attggtgcgc ctgggtggcc
    31441 tgagttagct ttttgtacag catccatact taaaaaacga attgcattcg ctagcacttt
    31501 acgttctgtc atttgtgtta ctcctaatcg agaatgttat ataaaatgga aaggatatcg
    31561 aattggattc tacactattt tgctagaaaa actcaaaaat ggaaatgaga aatgtgatct
    31621 gtatcacaaa aaatgattaa attgtgattt gttttgattg gattttaata gacggttttt
    31681 tcctaataca atattttctt gataaagcga atgtttagta gttgatctag gcaacaaatt
    31741 tatctaaaat acgcactctt tttggcgttg agcatttgct caacattttt attaattaca
    31801 tatggtacct atcagcggta gagattctaa caagataggc ggcgatatgg cttcttatga
    31861 ggttccccaa tgaaacaagg tattcaccca gaatataaag aaattacggc aacttgctct
    31921 tgcggtaatg tagttaaaac tcgctcaaca gtgggtaaag atttaaactt agacgtatgt
    31981 ggcaactgcc acccgttcta tactggtaaa caacgtgttg ttgacaccgg tggtcgtgtt
    32041 gaacgcttta acaaacgttt cagcatccca agctcaaaat aatttgatta ttgcaaaccc
    32101 cgctaatgcg gggttttgtt tttcttatat atcgaattaa caagcggtgt atttttctat
    32161 caattttgca aattggtgat ttaaccattt tgcaggagct accagagaaa aacctcgagt
    32221 atcattatta tcctcggtcc atttatctgc gatcaccata aaagtttcaa catctttctt
    32281 aggttttgga taccagcgtg caatattagc tggatgattg gcataaaatg agagcaattt
    32341 cttgcctaat gcacaagaaa tatggacacc acctccatca actgcaatta caatatcagc
    32401 agagtttact aatgcacaat aacctaaaat atcactatta ggtgctaggc ttatttcaaa
    32461 tggggcttta attttcgaca aatattcggc actattggtt gtattggtca gcaaacaact
    32521 aatatgttga acatatcttt tatcaatcat agataatagc tctgataatt cttgagtaga
    32581 aatttcacgc atactacctt gaggattcaa tagtaatcga attttcttct cttgccatag
    32641 cgtatttgca aaactgctta gttcattagg aatgtttaaa ttataattga cctgattttt
    32701 ttctaaaaaa tcagcaaaaa tagcatagtt gagatagtca gcaaaatgaa cctgctttgg
    32761 aaagacagtg gtgaaatcgt aattttttac tgtatctaaa ttgtaaatac ttttttgttt
    32821 tttaccgaag ttaataataa atttaggctt taaaatacta tctaaaataa tactttttgt
    32881 ggtaaatgtc ggtttgaaat ctaaataaag atcccaatgt ccccgctgcg agagataagt
    32941 ggatacttta tcttctaaga tcatatctac cacgtttgct tgagagaaaa tcaatttgtt
    33001 acgagatgta actaaaaccg ctatttttac atttgggaga gcttttttaa tttgctccaa
    33061 atgagctata tgcacaacag catcgccaat agcatctccg ataggtttga gtaatacgga
    33121 ttctattttg ctaaatttga aggttttttt ctcttttttt gtaccaaaaa gttttataac
    33181 taaggatttc atctctataa taggttgatt cttttaatga ttggttatag taagtaaaaa
    33241 tgaatattaa agcaacgtta agaaaagcaa gattggtgat aggtaaagcc attttagata
    33301 gtaaaaatac tgatctgata ttatcggaaa ttcccaataa aattctattt cttcgtcacg
    33361 atggtaaaat tggtgattat gtcgttagtt cctttgtctt ccgtgaaata aaaaaacagt
    33421 ctccccaaac gcaaataggc gtggtttgct cacagaaaaa ccgatattta tttgagaata
    33481 atccttatat tgataagctc tatttggtta agacaaaaag tattcctgat tatattcgtg
    33541 gtggcaaaca acttgcaaaa gagcagtatg atgttgtaat cgatccgact gttactttac
    33601 ggaatcgtga tctcttattt ttacgcacta tatcagccaa acattatgta ggttatcaga
    33661 aacaaaaata tcgattattt gatctaaatg tagaggatag aaaacagcat ttttcagaga
    33721 tttatcaaga tgcgttagct ttaatcgggt ttgaaaatat agaaactcag tatgatgtgc
    33781 cactaaatgc cacaagcaac caatccataa agcattattt atatgaaaac caaattagaa
    33841 attatattgc gttaaatctt tttggtgcag gttcggcaag acgttttagt gagcagaaaa
    33901 ttaatgaact gctgagttgc ttaaaacagc atagtgataa accgatagtc ttacttactt
    33961 ttcctgaagt aacggcaaaa ttgtgttcct ttactaagaa gtataaaaat atatttgtct
    34021 atgagaaaac caaaagcgtt tttgattcaa tagaactgat tcgttttgcg gacttattaa
    34081 tttcacctga tactgcaacc gtgcatattg cctcaggctt gagtaaaaag ataattgctt
    34141 tttacagtag cgatgaacag aattttatac attggcatcc gaataatcag gctgaaaccc
    34201 atattctccg ttttagaaaa agcgtgaatg atttagattt tgctgcaata aaaccggagt
    34261 ggctaaaata atatggactt ccaaagcctt aaacttttcc tagatatagc ccaaagccgt
    34321 agttttattc gcagtgcgga gaagaattat atgacggctt ccacacttac ccgccatatt
    34381 cagcgtatag aggaggagct cgggcagccg ttgtttctgc gtgataatcg acaagtgcgt
    34441 ttaactgaag caggggaaag gtttttggcg tttgctcaac aaggttgggc agagtggcag
    34501 cagttgcaaa accagttgtc gcctgctcaa ggtgatttag aaggagagtt gaaagtgttc
    34561 tgctcggtaa cggcttctta cagccattta ccgccgattt tgggaaagtt tcgccaaaaa
    34621 tatccgaaag tggatattaa actgagtacc ggtgatccgg ctttggcatt ggaacaggtt
    34681 cagtcattgg ctgcagatat ttcggttgcg ggtaagccgg aatttctgcc gaataatatt
    34741 gtgtttcact atattgatga tattcaactt tcgattattg cccctcgtgt ggcgagccaa
    34801 gccactcaat ttctgcaaca gtcgccgata gattggaaaa atatcccctt tattttgccg
    34861 gtgaacggac ctgtacgaaa acggattgac cgttggttta aagagcaaaa aatcaaagac
    34921 ccgattattt atgctaccgt ctccggacac gaagcgattg tgccgatggt tgcactaggc
    34981 tttggggtcg cactgctacc ggatattgtg attaagcata gcccaatgaa taatcaagtt
    35041 tcttatgtga atttaccctc gccgatcact ccgtttgagc tgggaatttg cgttcagcaa
    35101 aaacgcttgc aagagccgat catcaacgca ttttggcaat tattgtctga taattcagca
    35161 taacaagcgg ttagattttg ctaaattttt gcaaaaaata gagcaaaacc gaccgcttgt
    35221 agataaaact ttcagataaa aaataaggtg cgtgattgtg atctgcgcac cttatgttgt
    35281 tttagattat tgcactttat tgcactgtgg ctttagctcg cgattttttc accttgatct
    35341 cggcttttga caagatttca atccccattg gcgggttttc tagtgccaga gctagtacct
    35401 cgtcaatggt ttctactgcg tgaatgtcca acgctgcttt tgcattttcc ggaatttcct
    35461 ctaagtcttt ttcattttct ttcggaataa tcaccgtcgt aataccacca cgatgggctg
    35521 ccagtaattt ctcttttaag ccgccgattg gcaatacttt gccacgcaag ctgatttcac
    35581 cggtcatcgc tacttcttta cgcacagggt tacctgttag gctggaaatt aatgcagtac
    35641 acattgcaat ccctgcactc ggaccatctt tcggtgttgc accgtccggc acgtgaacgt
    35701 gaatatcccg tttttcgtgg aagtcttcag caatgcctaa tttttctgca cgagagcgta
    35761 caaccaccat tgccgcttga atagactctt tcattacatc gcctaatgaa ccggtgtaag
    35821 agaatttgcc tttacctgca acagaagcgg tttcaatggt taataaatca ccgccaactt
    35881 ctgtccacgc taaaccggtc acttcgccaa tgcggttttg gctatccatt ttgccgtagt
    35941 caaaacgttt tacgcctaag tattcttcga tatttttctc agaaactgta atggatttta
    36001 atttcttatc caatactaaa gctttcacgg ctttacggca gattttcgca atttcacgct
    36061 caaggctacg cacgcctgct tcacgggtgt agtagcggat aatacttaaa attgcactgt
    36121 cttcaatggt cagctcaccc tcttttagtc cgttattttc ttgctgttta gccagtaaat
    36181 gaccacgagc aatgtgcatt ttctcatctt cggtatagcc tgaaagacga atcacttcca
    36241 tacggtcgag caatgctggc ggaatgttca ttgagtttga ggttgccaca aacattacat
    36301 cggataaatc gtaatccacc tctaaataat ggtcgttaaa ggctttattt tgctcaggat
    36361 ctaacacttc aagcagagca gaagccgggt cgccacgcat atcttgagcc attttgtcga
    36421 tttcatctaa caagaacagc ggattacgca cgccgacttt cgccattttc atcattaggc
    36481 tacccggcat tgagccgatg taagtacggc gatgcccacg gatttccgct tcatcacgca
    36541 cgccacctaa cgccatacgc acatatttac gccctgtggc attggcaata gattgcccta
    36601 atgaggtttt accaaccccc ggcggaccaa ctaagcacaa aatcggacct tttaatttat
    36661 ttagacgact ttgcactgct aagtattcta caatccgctc tttcactcgt tctaagccgt
    36721 agtggtcttt atccaaaatc tcttgagctt gggctaaatc ttttttgacc gctgattttt
    36781 tatgccacgg catttgtaaa atccagtcaa tataaccacg cacaacggta gcttcggaag
    36841 agctttgcgg cattgctttg agctttttga actccgtatt cagcttgtct tttacctcgg
    36901 tcggtaattt tgcagcgtca attttctctt taagcttatc taactcgctt tgttcaacgt
    36961 catcgccatt acctaactct ttttgaatcg ctttaatttg ctcgttgagg tagtaatcac
    37021 gttggttttt ttccatttgc tgtttaacac gattacgaat ccgagtttcg gtttcaagcg
    37081 tatccatctc agttgccatc gcaattaaca aggcttcaaa acgggcaatc agatttggtt
    37141 gctccaataa ttcctgtttt ttcttcaccg gagcaattaa gttagaggca atggtatccg
    37201 ccaagcggtc ttccaacgtg attttttgca gtttagcaat aatttccgcc ggaattttct
    37261 tgttattttt aacgtaattt tcaaattcgg ttaaagtggt tttagcaatc gcttttaact
    37321 cttcgttttc gtcatcatat tccgaatata ttggctgaat tgccgcccag aagccgtttt
    37381 catcatcgtg aatttgctcg attttggcac gggtttgtcc ttctaccagc actttaactg
    37441 tgccgtccgg caggtttaac atttgaataa tgttggcaat tacacctacg ccatacatat
    37501 cttctgcatt cggctcttct ttatttggat cttgctgagt gactaaaaac agttgtttat
    37561 tggaatccat cgccgagcgt agggcttgaa ttgatttttc acgtcctaca aataacggca
    37621 taaccatata aggaaaaacc accacatcac gcaatgggag tagtggtaat tcaatcgctt
    37681 tcttttttct tggtgccata aatttgctct ctctatcaaa atataatccc ccattatgag
    37741 ggcgaatttg ggaaaaacaa gggaaaattt gatttatctt aaaaaaactc gaatagtcaa
    37801 aacagtagat gttggcgatt taatcaattg ttaaaatcag ggtaattagc ttaatttccc
    37861 gcttgacatc aaatcgtaat gcgagcaaaa tcccctgcat attttaatct tcagggcagg
    37921 gtgaaattcc cgatcggcgg taaagtccgc gagccgagca atcggcagga tttggtgaaa
    37981 ttccaaaacc gacagtatag tctggatgaa agaagagtca aaaaccgcaa aaaataccgc
    38041 acaagcggtc attttttgtg tcttttttgc aagccttgag tcgtgagatt tcaaggcttc
    38101 attgttttgc aggcggcgtt tgcaaatttt ttactaaaaa cgaccgcttg tattgcaata
    38161 atcctttcat tacgccctca atttatcaaa atgtatatga cagatgttca atatatggct
    38221 tatgccatca cccttgccga aaaagcacgg ggttggacaa gccctaatcc gctagttggc
    38281 tgtgtgatcg tgaaaaacgg caacattatc gccgaagggt atcaccaaaa agccggtagt
    38341 tggcacgctg aacgcaatgc gattttaaac tgcgaggaag atctgacggg ggcaaccgct
    38401 tatgtaacct tagagccttg ttgccaccac gggcgaaccc cgccttgttc cgaactgctg
    38461 attgaacgtg ggatcaaaaa agtgtttatc ggctctcgag atccgaaccc acttgtttct
    38521 ggcaaaggag cggcacagct tagagccgcc ggcattgagg ttgtggaaga ctttatgcga
    38581 acggagtgcg atgcgctgaa cccgattttc ttccattaca ttcaaaccaa acgcccttat
    38641 gtgttgctga aatatgggat gacggcagat ggtaaaattg cgacttatac ggggaattcg
    38701 aaatggatca ccggcgaggc tgcccgagct aatgtacaga aaagccgcca cgaatatagt
    38761 gcgattatgg tcggggtgga aacggtgctt gccgatgacc caatgctcaa cagccgaatg
    38821 gaaaatgcta aacagccggt gcggattgta tgtgacagcc aactgcgtac cccattggat
    38881 agccaactag tccaaactgc acgccaatat cgcaccatta ttgctacgct caataatgat
    38941 gcaaaaaagc aggcagaata taccgcttgc ggtgttgaaa ttttagtgac aggcgaacgt
    39001 gacaagcggg tggatttagc cgatcttttg caaaagctgg gcgaactcgg gatcgacagc
    39061 ttattgattg aaggtggttc gcaactcaat ttcagcgtgc tggaacaggg gttagtcaat
    39121 cgagtacatt gctatattgc cccgaaactg attggcggca aagcggcaaa aaccccgatt
    39181 ggtggcaagg ggattggcga gttagcacaa gcggttaaat tacgtctaaa atccaccgaa
    39241 ttgctcggag aagatatttt gttggattat gaagtggact tgcttcgtaa ttaaattgaa
    39301 atttccttac tctcgcccgt ttacgggaga gagacagcat aaaatttcgt tcagaaattt
    39361 tatgcagaga gaggggaaaa tgagtgtaat cttccctctc cctccgaaaa tcctacggat
    39421 tttctcttcc ctctcccgta aacgggagag gggaatagta agataagcag ttctcagact
    39481 aaattggaag taaatcggag aaaaatttaa atgttcacag gcattatcga agaagttggc
    39541 cagatagccc aaattaagaa acaaggcgag tttgtggtgg taacggttaa agcaaaaaag
    39601 attctgaccg atgtacattt aggggatagc attgcggtaa atggcgtgtg tttaaccgtg
    39661 acttcattta cgcaggagca atttactgct gatgttatgt cagaaacctt aaaacgtaca
    39721 tcacttggcg aattaagtat caacagctcg gttaatcttg agcgggcaat ggcggcaaac
    39781 gggcgttttg gtgggcatat tgtgtcaggt catattgatg gcacgggtgt ggttgcagag
    39841 attacaccag cagataattc aacttggtat cgcattaaag ccgaacctaa gttaatgcgt
    39901 tacatcattg aaaaaggctc aattactatt gatggcatta gtttaacggt ggtggatgtt
    39961 gatgcggaat ctttccgggt atcgattatt ccgcatacca ttaaggaaac cgacctcggt
    40021 acgaaaaaaa tcggtagttt ggtgaattta gaaaatgaca ttgtcggcaa atatatcgaa
    40081 cagtttttat tgaaaaaaga gcctgaaaat ccgcaaagta aaattactgc ggactttctt
    40141 aaaaatgcag ggttttaacc aaataaagga caaataatgt ttaagttttc aacggtagaa
    40201 gaagcaattc aagcaattgc acaagggaaa attattttag tcagcgatga tgccgaccgt
    40261 gaaaatgaag gggacttcat ttgtgcagcg gaatttgcga caccggaaaa tatcaacttt
    40321 atggcgaaat atggtaaagg gttgatttgt acgccgattt cgacagaaat tgccaaaaaa
    40381 ttaaattttc acccgatggt gctagagaac gaagataatc atcaaaccgc atttaccgtt
    40441 tctgttgacc atattcaaac cggcaccggt atttccgctt ttgagcgttc attaacttgc
    40501 ctgaaaatgc ttgatgaaaa tgctaagccg gaagatttta gacgtccggg gcatgttttc
    40561 ccattagtgg caaaagacgg aggcgtatta gtgcgtaacg gtcataccga agcaactgtg
    40621 gatttagctc gtttggcggg cttgaaaccg gcagggcttt gctgtgaaat tatggcagaa
    40681 gacggcacga tgatgcagat gccggaatta caggcatttg cacaagcaca caatatgccg
    40741 tttattacta ttcagcagtt acaagagtat cgtagaaaac acgacagctt ggtgaatgtg
    40801 gtttcggtgg taaaaatgcc gaccaaatac ggtgagttca aagcacacag tttcgttgaa
    40861 actatttcag gcaaagaaca cgtcgcttta gttaaaggtg atattggtga tggcgaaaat
    40921 gtattatgcc gtatccattc cgaatgttta accggcgatg cctttggctc acaacgttgc
    40981 gattgtggtc agcagttcgc agcggcaatg aaccaagtgg agcaagaggg cagaggcgtg
    41041 gtgctttatt tacgccaaga aggacgtggc atcggtttaa ttaataaact gcgtgcttac
    41101 gaattgcaag atagaggaat ggacacggtt gaagccaacc tggcattagg tttcaaagat
    41161 gatgagcgtg aatattatat cgccgctcaa atgtttgaaa aattaggcgt aaaatcgatt
    41221 cgtttgttaa ccaataatcc ggcaaaaatt gaaggactca ttgagcaagg tttaaacgta
    41281 gtggctcgtg agccgattat ggttgagcca aacgaacacg atttggaata ccttaaagtt
    41341 aaacagcaca aaatgcgaca tatgtttaat ttctaatcca atactctctc cccttgtggg
    41401 agagagacag aaaaatactt cgttcagaag tatttttcag agagagggta tattttttag
    41461 aaaaagtttg caatttcccc tctccctgat ttttcttctg aacgaagaaa aatctatccc
    41521 tctcccacaa ggggagaggg ttattgagta tcaaatttat tttaaagaag gaaaacaaac
    41581 aatggcaaca tttcaaggaa actacatcgc aactggttta aaattcggta ttgtggcaac
    41641 taactggcac aagattttta tcgatcaact gttaaacggt gcaaccgata aattattgcg
    41701 tcacggcgta gaagaaaaaa atatcgacac cgtatgggtg ccgggtgcat tagaaatctc
    41761 aattgcagcg aaaaaaatgg cacaaagcgg tcgttatgat gcgattatct gcttaggtgc
    41821 ggtcgtgcgt ggagcaacca gccactatga tgtggtagtg aacgagtcag caaaaggcat
    41881 cagctcttct gctttagaaa ccggcgtgcc gattattaac ggtattttaa cggtggaaaa
    41941 tttagagcaa gcgattgagc gttcaggcac taaagccggt aataaaggcg aagagtgtgc
    42001 aatggtagcg attgaaatgg cgaacctatt aaaagcctta gcgtaatcag cgataaaatc
    42061 cccttagacc caagagccta aggggatttt tttattttct gcgtagtaac aggctggcaa
    42121 tgacacaaaa taggctgaaa ctgtaaatta accagtgacc taattgttta aacggcgtat
    42181 cgcctttggt tggcacaatg gtggcagtta gtgcatcagc agtaaattgc ggtagttgtt
    42241 caattacttt tccgttggca tcaacaatgg cggtaatacc ggtattcgca gctcgaagca
    42301 atggtttgcc aagttctaac gctcgcattc ttgccatttg gaaatgttgc caaggcccga
    42361 tggaagaacc aaaccacgca tcattggtga tagttaataa ataatctgaa ttttggcttt
    42421 tttggttttg ttgtaactga tcaccaaaaa taatttcata gcaaatcgcc atattaaatc
    42481 ggttgttttt cgccaagaat gatggttgaa cgaaactgcc ttgtgaaaga ttaattggta
    42541 gaataaacac ttcccgcatc caatccagca ccgagccaaa cggcacatat tcgccaaacg
    42601 gcacaaggtg atgtttgttg tagcgagggt tgctgtgcag ggcatattcc ctctcttttt
    42661 cgcctaatag cacgctactg ttaaacagtt cctcttgctc attttgatag agtgtgccga
    42721 taataatttc acttccgtgt tggcgagcta agtgatcgag cgagccaagc agcgggctga
    42781 tttgattttc aagtgccgga atggcggatt caggcaaaat aatcagttca ctgttaccta
    42841 ataggggcag aatgagctgt tcgtaggttc gtacgctgtg gttgaaatgt tgcggatccc
    42901 acttcatttt ttgctcaata ttcccttgta ctaaactcac tacaagcggt tgtttttctg
    42961 tatcaatttg cacaaattgg agaaagcgag tggcaaaact taagccaaaa atgaccgcta
    43021 gtaccatcaa tgatggcaca gttttgttct cttgctgaat aattttcact agatagctac
    43081 ttgcaactat taccaagaaa gtcaaacctt caacgcccaa aatcggcgca ataccagcaa
    43141 aggggctgtc tattaagcta tagccgaatt gtagccacgg aaaaccggta aataccacgc
    43201 ctcgtaaata ttcggtaaag gtaaaaatcg cagccaatgc aaacggatta ttcagtttga
    43261 gcctgtgtga aactacacta aacagcagat tataaatagc gagatagcac gccaacagga
    43321 atactgctat gtagcttact atggtaggaa caccaccaaa ttgggtcata ctcacagaaa
    43381 cccagtttac accggtgcag aagtagccga tagaccaagc aaaggttgcc cataatgcgg
    43441 tttttctgtt tgccagagtg gctgaccaaa ccaagccggc tgcggaagca aaggcaagaa
    43501 tccaaatatc aaaaggcgaa taggcgaaag tgccgattgc acccagtatg attgcaagga
    43561 gacaagcggt taaaaaaggc ggattttttg caaaattcat aataactcac taaataaatg
    43621 aggcacgccg aaacgtgcct tgattgaaac tcactatatt attcttcttc gttaggagag
    43681 gttttttcca ttttctctaa ctgttcatcg gaaagtgtga ctcgtagctg aatcaattgg
    43741 cggctattag ctgaggtgac tttaaaatca attccgttta actcaatttg ctcatctcgt
    43801 ttcgggaaat aaccgaaagc ctgcatcact aaaccaccaa tggtatccac ctcttcgtca
    43861 ttaaagtcgg tagcaaaaaa ttcattgaat tttttgatgt cggtgagcgg taataccgca
    43921 taagtatgtc ttgaaagctg gcgaattggt ttgacctctt cttcatcaaa ctcatcttca
    43981 atatcaccca caatttgttc aagaatgtct tcaatggtga ctaagcctga aaccgcacca
    44041 aattcatcaa ccactactgc catatggaag cgttctgaac ggaactcttt tagcattcgg
    44101 tctaggcgtt tgctttccgg tacaataacc gcagggcgta atacctgttg cagattaaag
    44161 ggttcagagt cagaacgtaa atatttcaat aaatctttag agtgaagaat accttcgata
    44221 gtatctttct caccccgaat caccggaaaa cgagagtgtg cggattcaat aattaaatca
    44281 atacagacat ctaaaggttc attggcatca ataaacacaa tttgcgcacg gggaatcata
    44341 atatcccgca ctcgtaattc cgagatttcc attactcctt cgatcatctc tttggtgtcg
    44401 ctgtcgatca attcattttc aacagagtct cgaatcactt cgactagatc ttcacggttt
    44461 ttaggctcgt tttgaaaaag cccgctaaat agagagtgta aaatcgattt tttttctgat
    44521 ttttcggtgg tgtttacact ttgctgttca tcactcatag tttgttccac ttaaataaag
    44581 tacgcttata ataagcaaat tcagtcacaa agcaaataaa acattgctat tttcactcaa
    44641 attagcatag gataagcaaa aatcttttta tttcttcata ttttaggagt ttgaaatgaa
    44701 attaaccaaa atagcattaa gtttaacagc cttagttgtc agttcgatga gtgtggccgg
    44761 gacgttaagt acatcatcaa tggtggacat tttagccttt gacgggcaac gtgttaaatc
    44821 cggcacgact tcggttcaaa tgagtgagaa taaaacgcat caagtggtag tggaagtcgg
    44881 tgggacagtt gaaggggatt ttttcacctc tgatcaaatc attttgactt tccaaggcag
    44941 tgcggaaaat gcaaaattag aaacgccaag attaaattca aagttagatc ttcgtaaatt
    45001 ccaagagaat cagactgtgg caattaaaac cgattcaggt aaggttattt cacataaaca
    45061 agatttctta aaaggggaag gtttccttgc gaaaacaaga gttgaagata atttaacgaa
    45121 atataactta gcgaaaaaaa cagcttcagt tgaacagttt gcgacggcac ctcttgaagc
    45181 aaaaggacaa attgtggtgg atacaaataa agtttcacaa gaagaattac agcttttatt
    45241 tagaaaggca gataaagaca cccaaaaacg tttcttagaa tgggcgaaga aaaatataaa
    45301 ataaacctat atcaattaat aagcggtcat ttctcgccaa ttttttgcaa ggtgttaaaa
    45361 aaatgaccgc tcatacaatg agatttacca gcaataatag cagtaacgcc agcctctata
    45421 catatagtct ctatcgtaat tccaacgaat ttcttcaagt tctacttgtg ccttgtaatt
    45481 ttgccaagca agcttataac aggcttggaa cattggggca ttgacttttt cggcatagcg
    45541 tttcttaaat gctttctctt cttgttcggt ttggctaagc ggcggattaa attgttggta
    45601 cattaactcc gccgtttcta catcacattg tttggcgagc tgaacttgca aatcttgttc
    45661 tgcccgaatt tgcttcgctt tacgttcagc ttgttgctct ggagttaaag tacagctact
    45721 taacataagt gcgagtgaaa aaatgcagcc taatttgagt gttttcattg ctgaatcctc
    45781 tagttgaaat tggtgattta ttctaccgct tctaactcac tttcttcaag ttcatcagcc
    45841 atagcactaa gggcatcacg gctaagttgt gcgagggctt tataaaaacc attgtcgaaa
    45901 gcttctattt ttcctaagaa tttgcctgca caaggtagta aaaattgttc gaataatatt
    45961 ttttgagcta aggcagaatc gagattatct tcgatccaag atgccgtgag aaatagtaac
    46021 ccaatgtgat cggcattttc taattcaggc attgcccgct cttgtctaaa agctacaaaa
    46081 ttattaactg ataatccata ggctgaaatt gttggagaaa tagccccatt ttcagcaaaa
    46141 agcgcttgat agcttgctgc taattgcgta gggttagcat tcttttgtaa gagagtcagc
    46201 gcattttcac tttggctatc cgtatttaat gcccagactt ggcgtaatcc tccttgggca
    46261 agccagttaa atgtgccagc taaaataggg tcggtagggt gacgataaaa taagttgcca
    46321 aacaaacggc aaagcaggga aaaatcgtta atggtagttt cgttcataat ttgaaataga
    46381 tagaaaaaag aattgttagt atagcagaac acaagagagg actgaatgaa atatataggc
    46441 gcacacgtta gtgcttcagg tggggtggaa aatgcagttt tgcgttccgt agaaattggt
    46501 gctaatgcat ttgcgttatt tactaagaat caacgtcaat ggcaggcacc ggcattaaaa
    46561 gccgaaacta tcgaaaaatt taagcgtttt tgtaaagtgc atcatttttc agcagagcaa
    46621 atcttaccac acgatagcta tttgattaat ttaggaaatc cggaagcgga ggcattggag
    46681 aaatctcgtg tagcatttat tgatgagatg tctcgagcaa atcaattagg tttaaaattg
    46741 ttgaattttc acccgggggc gcatttaaag caaatttccg agcaagattg tttggctaga
    46801 attgcagaat cgatcaatat tgcagttgaa aaagtaccga atgttattgc cgtgattgaa
    46861 aatacggcag gacagggttc taatttaggt tggcatttcg atcatttggc aactattatt
    46921 gagcaagttg aggataaaag ccgagtgggg gtgtgtttag atacttgtca cttattttct
    46981 gccggctatg atattagttc ttatgaaaag agcgaggcag tatttaatga ttttaaccaa
    47041 acggttggtt ttcattattt aaggggaatg cacttaaatg gttcaaaaac accattaggc
    47101 agcagagtgg atcgtcatca taccttaaga gaaggcacaa taggaaccga agtgtttgca
    47161 tttattatgc aaaatatgca ttttaaccat attcctatga ttttagagac aatttcgcct
    47221 gaaatttggg cagatgaaat aaaatttcta cgcacattgg aactaaaata ggttatactg
    47281 gtctgagtag tgggtctagc agagtctaga ccttattttg ttatcttttt taatctttta
    47341 gaagatttag ttaaggaatt taccgctgta attgttctgg cgagacgaga cataaattat
    47401 gaaaaaaaat ctttttgcaa caaccttcaa gcccgtattt attgcttcta ttttgtctgt
    47461 ttttggaggg tattcttcca ttgctgtagc aagtttaagt tctaaaccgg ccacaccaaa
    47521 tcaaatcatt gcaagtaaag cagaaagatt agctaagtct tcttcagtat ttaccaatcg
    47581 agcaaatctt ccaacttctt ccgctcatac agcgaattat agtggtcgta ttaatagtgt
    47641 ttatcataat tgggtaggga cacgctatcg tttaggcggc acaacaaaag caggaattga
    47701 ttgttccgcc tttgtgcgtg aagtaatggg caaagcattt agtaaagata tgcctcgttc
    47761 aactgcagaa caacgccatg tcgggcattc catttcaaaa tctgatttac gcccaggtga
    47821 tttagtcttt ttccgtaaga ataaccatgt aggggtttat attggtaatg gtaaatttgt
    47881 acacgctagt tcaagtagag gggtaaccac cagctcattg tcagaaagct actggtcaag
    47941 aaactacaca caatctcgcc gtgtaattta ataaattaca attccaagat gaaaagaaca
    48001 ctcacttttg cgagtgttct tttttaatta aaaaagttta tgctacgcgt tgcttagctt
    48061 gtgtaaatgc tccacgagta cgcatttgat gaaccacatt agtaattaca cctgctattt
    48121 ttacttcagc ccaatcagta attctaagat ttgattcgct cacatctaat gaaaataaaa
    48181 ttttttcagc aataccttcc ccattctgaa tttcattaaa gaattgatag aatttatatt
    48241 ccccatcttt ttcaagcacc aatagatcat taactaaata ttggttggtc tgttctacaa
    48301 tcaataaatc gtctagttca attccccacg cgattaaatt tgggtttttc acgtggataa
    48361 aaaaagtgtc tcttgggcgt ttgatacaaa gtgagttaag atcgagcttt acagagcggc
    48421 tgctattgaa atcccgataa agcggaatcg gctgataagc tgccgtttga tctgaaattt
    48481 gtctaattga agccatagta aaatcctcta tctgtttttt tatacagggt attttactgg
    48541 ctaaaatacc agtgtcaacc attattttgg aattttttgt aaatttaacc agtgttttga
    48601 ccgcttgtta tcctttaaaa agcaataaaa aagcacccat agggtgcttc ttatgcttaa
    48661 aagctgttat tataggcttt cagtgaatgt acgagtaata acatcgcgtt gttgctcagg
    48721 ggttaatgag ttgaaacgaa ctgcataacc tgaaacacgg atcgttaatt gaggatattt
    48781 ctcagggttt tgaatcgcat cttctaatgt ttcacggcgt aaaacgttta cgtttaagtg
    48841 ctgaccacct tcaactttaa tcgttggtgc aacattaacg ggtacttcac ggtatgcgat
    48901 atcacctaat tcgctgatag caacaacttg atcttcttca aatcctgctt ttgcagctaa
    48961 acaacgagct tcatttttag cttcgtctaa taaccagaaa gagtttaata agttgctgtt
    49021 tgatgattct gtgatttgta c
//
LOCUS       DANLTI010000003        48944 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.003, whole genome shotgun sequence.
ACCESSION   DANLTI010000003 DANLTI010000000
VERSION     DANLTI010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 48944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48944
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.003"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            97..600
                     /locus_tag="PXB09_000113"
     CDS             97..600
                     /locus_tag="PXB09_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HDL5232275.1"
                     /translation="MNQSYFNLLGNITWLWMNSSLHKEWSCELLARNVIPAIENEQYM
                     LLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLL
                     YKKMCQKYPDMIVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKN
                     EFNFIKK"
     gene            616..3477
                     /locus_tag="PXB09_000114"
     CDS             616..3477
                     /locus_tag="PXB09_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX family hemolysin"
                     /protein_id="HDL5232276.1"
                     /translation="MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKI
                     ILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREERNNIATAQTSLGTIQTAIGLTE
                     RGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE
                     ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGD
                     KLKNIGGLDKAGLGLDVISGLLSGATAALVLADKNASTAKKVGAGFELANQVVGNITK
                     AVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADKFNHAKSLESYAERF
                     KKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSG
                     ITGVISTILQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMK
                     FLLNLNKELQAERVIAITQQQWDNNIGDLAGISRLGEKVLSGKAYVDAFEEGKHIKAD
                     KLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV
                     DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGT
                     TEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALV
                     GNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVDT
                     IDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIIT
                     DSDGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKAT
                     KDEKIEEIIGQNGERITSKQVDDLIAKGNGKITQDELSKVVDNYELLKHSKNVTNSLD
                     KLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA"
     gene            3552..5678
                     /locus_tag="PXB09_000115"
     CDS             3552..5678
                     /locus_tag="PXB09_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063101322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDL5232277.1"
                     /translation="MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSL
                     TAWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNL
                     EQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLI
                     VSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFS
                     HSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLD
                     LLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFL
                     VESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVI
                     NLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLN
                     SPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSG
                     KSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIAL
                     SDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNN
                     PKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEI
                     VEQGKHHELLQNSNGLYSYLHQLQLN"
     gene            5690..7126
                     /locus_tag="PXB09_000116"
     CDS             5690..7126
                     /locus_tag="PXB09_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_140441352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDL5232278.1"
                     /translation="MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPA
                     HLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPI
                     ENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI
                     EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTI
                     FAYVRKYEGATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNE
                     LENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVS
                     GTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETF
                     PYTRYGYLTGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITA
                     EIKTGERSVMSYLLSPLEESVTESLRER"
     gene            7367..8365
                     /locus_tag="PXB09_000117"
                     /pseudo
     CDS             7367..8365
                     /locus_tag="PXB09_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            8382..9125
                     /locus_tag="PXB09_000118"
     CDS             8382..9125
                     /locus_tag="PXB09_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232279.1"
                     /translation="MKQKYIYGLAGLLLLLLGWQLGTALLSQRLPMASMLAPAKTWES
                     FTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRM
                     ISPLSWMPIIVMLLGVGDLPIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSAT
                     RKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQGLGYFILDTRDRLAYS
                     ELMAVIIIIGLIGWALDSLIRLALAKGGR"
     gene            9280..10338
                     /locus_tag="PXB09_000119"
     CDS             9280..10338
                     /locus_tag="PXB09_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDL5232280.1"
                     /translation="MSVLSSSFIQWLQQNAENLDQSNERADLLIPQIAALGLYKIGVP
                     ETLGGSGGTLVDAIKAVTELGNHSLAAAFVSWGHRTFIEHIIASKNPIPRQSYLADLL
                     NGNLTAGTGLSNAMKFLSGIEELNVNIREENGKRYLNGRLPWVTNLRSYRFVASFVAG
                     FQDERKPLVIAIPSTAKGLTRTKELEFIALQGTNTTSLVFENVELQDEWILADDAPEF
                     LAATRPAFLGLQFGLPFGLVERSLAEIEKSLPFRAILASEWQAQVDALNDIKTRLFNG
                     LNEEGYFVRNPKELFQARIDIVNVVAQTILLELQASGGRGYLKNDTSGFSRRWKEAAF
                     LPVVTPSAVQLRMVLANS"
     gene            complement(10459..11001)
                     /locus_tag="PXB09_000120"
     CDS             complement(10459..11001)
                     /locus_tag="PXB09_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5232281.1"
                     /translation="MSQFQIHTIESAPETAQEALKAVQQANGFIPNLIGVLANAPTAL
                     ETYRTVGGINSRNSLTAEEREVVQITAAVVNGCGFCVAGHTKIALKALKMPEEVVNAL
                     RATARIDDNKLDTLARFTLAVMLQKAKLTEAQLNEFFAAGYNQQNAIDVILGVSLATL
                     CNYVNNIAEIPINPELQPFA"
     gene            complement(11153..12562)
                     /gene="glpK"
                     /locus_tag="PXB09_000121"
                     /pseudo
     CDS             complement(11153..12562)
                     /gene="glpK"
                     /locus_tag="PXB09_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
     gene            complement(12557..12742)
                     /locus_tag="PXB09_000122"
                     /pseudo
     CDS             complement(12557..12742)
                     /locus_tag="PXB09_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12790..13467)
                     /locus_tag="PXB09_000123"
     CDS             complement(12790..13467)
                     /locus_tag="PXB09_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5232282.1"
                     /translation="MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEG
                     KRGVAFEYHYSSLPISVQQELGFAQTAVKEEPRTLVAAQTADEMERVPFYNVQASAGF
                     GAFNSEVYAPDDYIGLSKRWLDVRGFYLSYLAFITASGDSMYPTISDGDMLLVNRATT
                     QPKDGKIYVFRQGEQLWVKRVQGIMGGIRLISDNKELYSPIDVIFDETLDFEVIGQVV
                     YIGHEMI"
     gene            13681..13899
                     /locus_tag="PXB09_000124"
     CDS             13681..13899
                     /locus_tag="PXB09_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5232283.1"
                     /translation="MARNKRVRDMSNFEIRGELMKIGKSLSQLGIENGLAKTTVRNAL
                     DKPYPKGEQIIAKAIGKTPQEIWPSRYE"
     gene            13909..15879
                     /locus_tag="PXB09_000125"
     CDS             13909..15879
                     /locus_tag="PXB09_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5232284.1"
                     /translation="MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVT
                     YEYHLTSLPIETQQQLRLNAALAVIPQAAELQPKRDDPALIARLNNATDKGRDKAKGK
                     AEACMQLQAFLDQGFSYTQAEAGAATAKNVSQGSLKNWYYKVKGHPVHLWQAILISES
                     GRSKKPQLKAKITEEAWDCFLADYLRPEKPDLRASYRRTQAIAKQYGWQIASLQTFQR
                     RVLAEVPYEVILLKREGANAVAKLVPALQRTVKDILAGEWINGDGYQHNVFVKWHTGE
                     IVRPKTWFWQDVRTRKILGYRTSISENTDSIRHALMDVIFNVGIPKTLTLDNTRAAAN
                     KAMTGGIENRYRFKHTELDPKGIMPILGIDVHFTSILYGEGHGQAKPIERAFGRGGIG
                     EKIDKRPELSGFYTGRNAQETPDNYNGGKDGVDYNTFLKAIAAGIEEYNSQTERHTEM
                     CRGELSFNQVWERDYHPSNVRQASPEQLRLLFLQAETVSIKRNGSFTLKAAGKLYGLT
                     NVYWAESLIGITDKKVVARFDPDDLHGNVYVYNLEGQFLAEAVCREAKGFGDTSASRE
                     QGRLYQKVVKSAKAQAEALELLEAHELASLAPQVDVPEPIEKKVKEVLVKEDFIVDFN
                     TVRKATVVEETEEISIFDEVLLKQEKQLRIVE"
     gene            complement(16059..16547)
                     /locus_tag="PXB09_000126"
     CDS             complement(16059..16547)
                     /locus_tag="PXB09_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232285.1"
                     /translation="MLFRSLTDDEIHQIALDSARATFSGFKLKRANAIVMKNCITLFK
                     LSTINFCLAEYHSSFHHLTSIDDLDGIMPTVKKVAQMLSLQESKALIWLLYLKWLFVM
                     RQRSLQVLLENSADLIQGEVIAQPLPTFVKAVLAFQLETYHGLPEWIPEFDSAEFWQS
                     LS"
     gene            16579..17520
                     /locus_tag="PXB09_000127"
     CDS             16579..17520
                     /locus_tag="PXB09_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5232286.1"
                     /translation="MTLIDQIKQHIAESGSSQGKVAKEAGINAGALSAYLNENYKGNN
                     EELEAKLIAYLERIEAKKREFVEAPSFIETKTANQIFGSLRFAQNTGVLAIIHGASGV
                     GKTQAAREYRKRYANVWLVTASPSRSSLSEVLYEIALELGMNDAPRRKGTLARLIVRK
                     MKGTAGLLIIDEADHLPYEALEELRLLQEEVVNESDIGAGVGLVLIGNDKVYTRMKGG
                     INPAHEYGRLWSRSAKRTSIQKTKKEDTQAVAKAWGLSENQEALKVMQAITETGGGLR
                     ILTHTLRLAAMVAKDRMIPLTADLIQLARKDLLSTGD"
     gene            17523..17837
                     /locus_tag="PXB09_000128"
     CDS             17523..17837
                     /locus_tag="PXB09_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232287.1"
                     /translation="MRTPKPKHSFNRTNQAACRFLKQTQKAIIRLNSLGFTVLNIDFT
                     RIKPRIEVEIGNNKHIAQGLIYEGKAYRYSFGKSEDLGRWEGYYTMLEGIRVWWRQAA
                     IH"
     gene            17849..18085
                     /locus_tag="PXB09_000129"
     CDS             17849..18085
                     /locus_tag="PXB09_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232288.1"
                     /translation="MKTLALLTALLGLVGCDLVQSKQAKNYIGNNLTEICIDNVVYLI
                     YSGDKKGGITPKVNKDFYPYTCTNKEERQNGKTR"
     gene            18069..18362
                     /locus_tag="PXB09_000130"
     CDS             18069..18362
                     /locus_tag="PXB09_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232289.1"
                     /translation="MAKPDETPITKAECQSQLAELGVQYKKLPMAITRHICNATTNIH
                     GKVIKVSVVERVGYGVQITAQGNEKSCLVTYEAMLGMAEAMGLFDEVKEQNND"
     gene            18484..18702
                     /locus_tag="PXB09_000131"
     CDS             18484..18702
                     /locus_tag="PXB09_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5232290.1"
                     /translation="MNDELAAISASYAQHNRYQHYAEKAAEAERKGNYKEAQDHWEVA
                     KLSAKKTANRDWAEQRAEFCKRMHNKPF"
     gene            18712..18894
                     /locus_tag="PXB09_000132"
     CDS             18712..18894
                     /locus_tag="PXB09_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232291.1"
                     /translation="MTETVKAQLNSQLNEAIIQLIQAQKYLNQDDAIRSGVYIGTVQD
                     LLPKVHLKLLTANRKH"
     gene            18911..19300
                     /locus_tag="PXB09_000133"
     CDS             18911..19300
                     /locus_tag="PXB09_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232292.1"
                     /translation="MAITEEQWKEIKQKLDSIIGRVKFRYKEHLLTVDVVQIKRSLKL
                     AVYVDGEIDGAWTKEGHEIRPYLEEVWYRKERPFFNAKEKKEYRGLMSKKKLNEKIVT
                     YSPMFPSPTALTRQYKKLDGLELIEVI"
     gene            19349..19636
                     /locus_tag="PXB09_000134"
     CDS             19349..19636
                     /locus_tag="PXB09_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232293.1"
                     /translation="MNKNEFFKKYHLEGSLAILDLDANDDQSQFCYQALLEYRELPLD
                     TFLAEYSDDEDMTESEFIELMLDELEWIIRRAKNAKRFVKKRQKTMREEIM"
     gene            19755..20300
                     /locus_tag="PXB09_000135"
     CDS             19755..20300
                     /locus_tag="PXB09_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDL5232294.1"
                     /translation="MTDKAKLIQLIHIAKSQLAMDDLSYREMLKRLTNKTSSTKCTVV
                     ELHKVLHELQTKGAKVKYFAKRSKKPTAYSPATGETAVKSQIAHKIRAVWITMGKHGF
                     LNDPSEKALNAYMRKVINNKTRPTILLNVSALEAGDASYMLEILKKWHKRVMIKALSK
                     SCTVDPKISYDELVEWYNEVM"
     gene            20287..20820
                     /locus_tag="PXB09_000136"
     CDS             20287..20820
                     /locus_tag="PXB09_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232295.1"
                     /translation="MKLCRCPICHSDIHLEALVEDEAGRELLGKISQLTHGVAQPMVA
                     YLGLFKPQKSNLNNSRALKILNDVLALYPCSLLLAQALSETVVSIRKKRQQAMENGQK
                     IEPLPNHNYLKSVYETQKVHFAVVRTGKTERETMKAELEKTRNAIAYVQRFVDLGREE
                     VVKNSPEYQIWLAHKPK"
     gene            20985..21344
                     /locus_tag="PXB09_000137"
     CDS             20985..21344
                     /locus_tag="PXB09_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5232296.1"
                     /translation="MELVDIFEEKAPEVLTDLAKHIEVALEEKCQFSPEKAKQIGIDI
                     AQQMAQNWGGEVIYIPRNLLMALNERDMKIYEEFNGNNHRELARKYNVSMQWVYKIVK
                     KVHKDEVARRQMSMFEM"
     gene            21480..21989
                     /locus_tag="PXB09_000138"
     CDS             21480..21989
                     /locus_tag="PXB09_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5232297.1"
                     /translation="MSQNLTFRQIFDRLIGHEGGYVNHPQDPGGETHWGITKRTAVAN
                     GYMYAMKNMTREQAYQIYEKAFWQRYRCAELKPAVAYQFFDAVVNHGFGNASRMLQRA
                     VGVADDGIIGNITLQAINAKSESDLLMLFNAERLKFYTKLRNFPTFGKGWVNRVAGNL
                     EYAAQDNEV"
     gene            21992..22261
                     /locus_tag="PXB09_000139"
     CDS             21992..22261
                     /locus_tag="PXB09_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5232298.1"
                     /translation="MAKLFKELLSTNGTLSTTSTVQFFGTLCVFGLMVYAVITQQPYA
                     ESLLNNVLIYLFGATTAKGVVTSYQAKIKGGIHKQQSTFKEEEGC"
     gene            22255..22602
                     /locus_tag="PXB09_000140"
     CDS             22255..22602
                     /locus_tag="PXB09_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5232299.1"
                     /translation="MLMQQILGVIGVIAAILSYALFKSWQLKRERKKNAILQAEKQQQ
                     AVEIEQKKAEVKYVYISKKNNEKVTRSSASDIDDKLQQHGYFRDNNRLHGVQSDLSEP
                     CGYAGNETSDSCS"
     gene            22629..22781
                     /locus_tag="PXB09_000141"
     CDS             22629..22781
                     /locus_tag="PXB09_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232300.1"
                     /translation="MKYIKKLRKRWQIWRFLKNHPEVAQRRDLLAIAIKQGVENPVGR
                     ARRREP"
     gene            22781..23116
                     /locus_tag="PXB09_000142"
     CDS             22781..23116
                     /locus_tag="PXB09_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2730 domain-containing protein"
                     /protein_id="HDL5232301.1"
                     /translation="MDLFTVFWESIRANFGFISALLTIVVTAFWLKLDSKYAKKNDLG
                     ELLEIAKSHDNRLTTLETKVENLPSAVDVEKLKTLVTDVKGDTKATSKQVDSISHQLG
                     LLLEAKLKE"
     gene            23118..23414
                     /locus_tag="PXB09_000143"
     CDS             23118..23414
                     /locus_tag="PXB09_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232302.1"
                     /translation="MSLRDLLTQDQRLVILRSLAEAGYDANESIISDCLDLYGHDISR
                     DLVRTHLSWLEEQGLLTLERLRDGYMVASITQRGLDVAQGRVVVSGVKRPRPKI"
     gene            23437..24009
                     /locus_tag="PXB09_000144"
     CDS             23437..24009
                     /locus_tag="PXB09_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HDL5232303.1"
                     /translation="MSEKNTRGRASKVDLLPPNIKTQLAMMLRDKQYSQSQILEEIND
                     LIRDCGLPDEMLLSKTGLNRYASRMERLGAKIRNAREVAEIWTKQFGEMPQTDIGKTL
                     MEMVKQIAFETSLKLGEQEGGIEPKQLALLSSAIQRLEQAESLSFKREQAIRKEVAQQ
                     AAETAEKVVVQAGLSAETVRTIKEQILGIA"
     gene            24009..25565
                     /locus_tag="PXB09_000145"
     CDS             24009..25565
                     /locus_tag="PXB09_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDL5232304.1"
                     /translation="MALLNNRPLNELAPECRSFLESIHAFNPNELLLGYQKRWIADDS
                     QLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAK
                     AFNRVAGEIQEEIFEDEDKDILTYVIYFSSGFKVKALSSNPKNLRGMQGVVVIDEAAF
                     HEYLAEVLKAALALTMWGAKVRIISTHNGSENLFNELITDSRAGRKRYSVHTITIEDA
                     CRDGLYQRICQVVTKKTWSPEAEKEWIENLLNDTASEEDALEEYFCVPKFGSGLWLSR
                     ALIERQMSEATPVIRFTAKDGFSLVAEPTRYAEIAEWCELELEPILATLNPDLLHFMG
                     EDFARSGDMTSLVVLAQQQNLVRKVAFIVELGNMPYKQQEQIVMFMLKRLPHFAGGAF
                     DARGNGGYLAEAARDEFSTLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILA
                     DLRSFQVVKGVPRIPDKRTKSADGKSKRHGDTAISLLLAHYASRQLVQMPVEPVSRRP
                     RHSQQLTEGY"
     gene            25684..27138
                     /locus_tag="PXB09_000146"
     CDS             25684..27138
                     /locus_tag="PXB09_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDL5232305.1"
                     /translation="MAKKNNLISEIATRARSIDYWAFGYYLPNPDPILKRMGKDISVY
                     RELLSDGQVRSGVRRRKAAIKGLEWRITTTNNEKVDEQIYQIFNRLPMNNLITEMLNA
                     ALYGYHISEVIWAKEGELFVPTEIIGKKPEWFMFDDENLLRFRTKENWADGELLPDDK
                     FLLTTQEATQDNPYGLGDLSLCFWAATFKKGGFKYWLEFTEKYGSPWLIGKHPRQAHN
                     TDKERLADALEGMISSAIAVIPEDSSVEIKDAAGKSASTDAFEKFLNFCKAEINIALL
                     GQNQTTEQESNRASAQVGLEVMEDIRSDDQAMIEATFNTLLQWIVKYNFNVEQLPKFE
                     FYEQEAINTDQVERDSKLHAMGVRFSKAYFEREYGFEAGDIEVQAVEKAEKSANTTEF
                     SEGQRRTQVPMPVPILEQLEHEGEAMVDDWLQGVRDKLAQADSLEDFQSQLDSLIPEL
                     SFAEYGELLALGSTVAELAGRQSVNDEIKAKRNA"
     gene            27131..28408
                     /locus_tag="PXB09_000147"
     CDS             27131..28408
                     /locus_tag="PXB09_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5232306.1"
                     /translation="MRKFTFKQQAQYFEKKLNLRTNSYLDILGEEHDYFFVVAGANRN
                     EVLSEFRKAVDEAIHNGETLENFRKRFDEVVAKTGWEYNGGRNWRTRIIYDTNVYGAY
                     NRGRLQQHLELAEDMPYWEYQHNDNAHPRPQHVAWDGLVLRYDDPFWKYHYPIKAYGC
                     HCTVQALDDFDLKHDGKTVSPPPEIEFEQKTVGVRTGNSRVVTVPKGVDVGFTPHNFD
                     NLKAGRAANVDKLLMQKMVTADPIFASKAVSDLLAKEPVAKLHNQAFKNWVNDVANAK
                     GSALSQVENMQLLGVLPVAVIERLQQINLAPQSAIIAITKGDMVHALRELKQNTGIAV
                     PLEFWEKLPAKLQYPNAILLEKQQAETTLLFIYDVAQTKIAVKVNYDATLQDRHGAKG
                     RQKVLLNRAVTGSLFQDTTGLKSSKYEVLLGEM"
     gene            complement(28610..28954)
                     /locus_tag="PXB09_000148"
     CDS             complement(28610..28954)
                     /locus_tag="PXB09_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232307.1"
                     /translation="MMVNAEQAIELVYDLLLSRQWLVTKAEKLPLDPLSEKEAVMFLY
                     TLDQQTEASWLQLTPEQRATANGLIMDFIAKCLTSTKQWLVSDNIVPELQAIEIIKHE
                     IFLSHNSLVMPN"
     gene            29018..29482
                     /locus_tag="PXB09_000149"
     CDS             29018..29482
                     /locus_tag="PXB09_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5232308.1"
                     /translation="MIKITLNNTQAVKSLQQIANQLEQPRRLYGILGETLKKIHTARF
                     KAEQDPDGNNWKPLASSTLALKRKRGKSTKILRQDGYLADKTAYNVTSDNVEFGSQEV
                     YARLHQFGGKAGRGKKVTVPARPWLGVGDKDEQLLLRKAEWHLGQIIGRMGK"
     gene            29717..30832
                     /locus_tag="PXB09_000150"
     CDS             29717..30832
                     /locus_tag="PXB09_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDL5232309.1"
                     /translation="MTQIEIFKAGKRYDANGTLIDITPEMLQQTVAAYNPEFHEAPLV
                     IGHPKSNNPAWGWVKALSLEGDVLKAEVDQLDAEFSEMVASGKFKKVSAAFYLPDSPN
                     NPHKGVLSLRHVGFLGAMPPAVKGLKQVEFAEDDDFVVFSEWGVASLFSRFRDWLVSE
                     FGLEKADKALPPHEIDWLKEEAMRSQISKQVHAEQATPEPIFNEPAQPEGEPEMSAEE
                     KEELERLKAENEQLKAEKAQAEAEKMEAELEAEKAGNAEFCEGLVKQGKLAPVAKAAF
                     VQALNNLSVLKAGREPEFNEGEDVVSQFKSAMSQSPQIIQFGEYATADKANPQEAEAV
                     EYAEGTDPVSIEADQKVRAYMKAHNVGYAAAFNAIYR"
     gene            30863..31789
                     /locus_tag="PXB09_000151"
     CDS             30863..31789
                     /locus_tag="PXB09_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDL5232310.1"
                     /translation="MTTHNLQKLRVQDPVLTELAQGYHNNELVAETLMPTVEIEKEAG
                     KIPTFGRLAFRLPSTVRNLRGSSNRLDPEDIGAIDVALEEHDVEYAIDYREENEAIFS
                     LRQFALNTTQDVIALGREKAVATLALDESRYETDNKVTLSGTSQFSHKDADVFKVFDT
                     AIRAVKRAIGRKPNVCVISGDVWAALKEHPAVVEKLKYSQVAIVTPEVFAKLIGIETV
                     KIGEAVYEESGQLKDIWSKDIVVAYVAPRSTGGKGTVYEPSYGYTVRRQKGLFVDTYK
                     ESGGKIEVVRTTDIHKPHLVGAAAGYLIKAAV"
     gene            31858..32139
                     /locus_tag="PXB09_000152"
     CDS             31858..32139
                     /locus_tag="PXB09_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232311.1"
                     /translation="MAKFIVLHTPILHDGKRYEVGAEIELTAEQAENNAINLKAVEAV
                     PKPPKNASKPEDEPKPEGEPKPEDAVTEDDVKLAEAKIAEAEQPKGNKK"
     gene            32139..32573
                     /locus_tag="PXB09_000153"
     CDS             32139..32573
                     /locus_tag="PXB09_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5232312.1"
                     /translation="MYVQIDELLTAFSRKIVVQLSNDEPTATEPDLKMLETAVKVANE
                     RIDAALRSRYTLPLADVPTLINQHALTLARYWLYARRPETKMPDTVKETYQQAVKELE
                     QIATGKLHLGIAESSQILEDDVLADNSEYEVRANARIDTSRY"
     gene            32579..33076
                     /locus_tag="PXB09_000154"
     CDS             32579..33076
                     /locus_tag="PXB09_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gp37 family protein"
                     /protein_id="HDL5232313.1"
                     /translation="MSATQPILEDICQHLRQALPEWEVELFPNDPSTYHLSHINGAVL
                     ISYLASKFEKPRTTQAVLQVRHVQIALTVLTRDLHNDVGALDLLDKLRLLVVGFKPQN
                     CGECWLIDEFFNGSSEETGLWQYQLILQTETQQVQHQAVENLPKFVTAHLRRQDQPGS
                     PGLKT"
     gene            33161..34546
                     /locus_tag="PXB09_000155"
     CDS             33161..34546
                     /locus_tag="PXB09_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDL5232314.1"
                     /translation="MTFHHGSETERVNGGSVPVSVVDSAIIGIVGTAPIGAVNELTVC
                     LTKKDFAKFGTILNQGFTLPDAFDILARYAAGKVYVVNVLDPSRHRTTVTDEVLTLDR
                     NTLTAQTAKTGIIAVTRVKDGANVLNADRYSVDLQTGVVTFVSAPSAPKISYIYADPS
                     KVTEEDIKGGVDSLTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALATLAD
                     QLHAKAYIQLPKGTSLSKAIQGRGPAGTINASASNENVRHFFPYALGSSNTLESLATH
                     AAGLRMLIDVEKGYWFSTSNKELKGVIGLEIPLTARVDDKQSETNLLNAVGITTIFNS
                     FGTGFRLWGNRSSNFPTVTHISNFEVASRTGDIIDESIRQAELQFIDLPIDDALLDSF
                     LETIDTFLRTQKSLVGYSVSLDYEYDLVDAFSRGQVPIVYEYTPKIPGERISNKSVMT
                     RKYLANLVSQR"
     gene            34557..35072
                     /locus_tag="PXB09_000156"
     CDS             34557..35072
                     /locus_tag="PXB09_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5232315.1"
                     /translation="MSIAINQIVNGNVYINGNSQMGRVNEVKIPDIEFEFIEHKGLGM
                     HGVIKLPAGTNAIEAEITWDSFYPEVRAVMLNPYKYTQLQIRSNLQVFNSQGLAAEEP
                     MVTIMNVSAGKIGGTGHKNKENAEFADTLNVHSIKQTVAGRELLFIDVLANIYRVNGV
                     DVLQKFRTNIG"
     gene            35168..35482
                     /locus_tag="PXB09_000157"
     CDS             35168..35482
                     /locus_tag="PXB09_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5232316.1"
                     /translation="MANAAQQVLTNLRVQTTYKLQYPIALPDGRVIETLDVRRPKGKD
                     FRLLDEKGFDPEKDGVKILRFYIQQLTTLVPEDIDELDAADIKGLNNLLEDMLIEGKS
                     DK"
     gene            35479..35631
                     /locus_tag="PXB09_000158"
     CDS             35479..35631
                     /locus_tag="PXB09_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5232317.1"
                     /translation="MSELDTVYADLAWWFKFSPSELLELDLVDIPKWVEQMNRQIKAG
                     YGQILR"
     gene            complement(35610..35912)
                     /locus_tag="PXB09_000159"
     CDS             complement(35610..35912)
                     /locus_tag="PXB09_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232318.1"
                     /translation="MLTKLNNRITEWAGFEACVTRTECTAKWLLAVALVGWSIFYWLD
                     AIQSIQSLSEGVSFVLIYGLILTILAWVGVYLAWGVAILLTLATEPFIWLYRKICP"
     gene            35960..38617
                     /locus_tag="PXB09_000160"
     CDS             35960..38617
                     /locus_tag="PXB09_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5232319.1"
                     /translation="MANNLAIGMVIGASLSSGFHGAFSGAKKKLEQLEQAVAKNQQSH
                     SKLGSELTALRSKQATLYAEMSRASSKGGAGLALMQQEYKKIGKEIANISREQRKWST
                     ELEKSIAKQTKLRNAMERHTQAKENRDELKGKIIGTVASAAMGVGVMKTYMEQEEAAN
                     NLKISMLKADGSFGKFEEIGKIADTLGTDLPGTKKDFYKLAMALKKQGVSDDVLTGGA
                     LKTSAELNVLLDMDQESGGEFLAKFMESHRLNENELPQAADYLQRAMFAGGLSKEQMY
                     ESMKYYAPKLNSMKLTGAENTEKVLAIEAMAGQQGLEGSTFGTGLNMMLSRMNKGPEM
                     LKAAAKGMKAEAREMMEAVGVEFNFWDKNGSFKGIDGMLAEMTKFEKIRKKFGDKGVG
                     LVAEELFGIEGGRLADILAMKGQKGLDEMLSKMREQASLQDRINLKTNTLGAALESLG
                     GAWETFVGDIGSVFAEDIKGFSKGLQSAVEWLVPFVSKHKEAIKFVGGLVAGLVILRG
                     VLQAGSFVIQTVTMAMNALKIAAMTNPIVLVIGAIAAGAYLIYSHWDSIAPWFANLWQ
                     NVTAYFNQFWTWVKGVWSGVTDWVSSVWNGVATFFGQLWTTITSLFSVAWTNIQTIWG
                     GATAWFSGLWDGIKSAAFGMFDSISQKVSSVVASIKSFLGFGDDVDKMGAKIGNVATQ
                     VISKEHSGQLSKTADMAANTGFSSGGFTGQGGKYTPAGIVHKGEYVMTKEATSRLGVG
                     MLDSLNYGGAMGFTQPVLQPILGKQKGFFGSLWDDVKFGANFVGNLLGLNQGSLKTPD
                     FNPNATNASGQNSSIFSNYEPLNRNAVTQQESSQAPQIVVNFNPTINVNGNATQEAQS
                     QIMQQLQMSAYEFEKLLNRVLDQRSRRAY"
     gene            38627..39550
                     /locus_tag="PXB09_000161"
     CDS             38627..39550
                     /locus_tag="PXB09_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232320.1"
                     /translation="MYFMLGNIAFEPVNLTEFSEQHTAEFAEHAVLKGKPRLQAMGEK
                     LNELNFSLRLHHTIGGVESRYQALLEAKAKQAALALIWGSRYKGDYVIVDISSTTLFT
                     DGRGNALAREMQISLKEFVGDNDGGVLGEALNFGGGSLLGSILPSGAVTTLSQIKTAV
                     SRGVELYNSGKRLVDEVQNTVAIIRQLKNDPATALAYLPAALANLDGALGHFGNLTGS
                     SATLGGLQEKLPAAVVFSEEIGEIYQSLQTMRSSLGNASANSWDNWFTPAESALTEVT
                     DSFDHLAKPVAKMTAWIVLRTDEEAENDTVA"
     gene            39534..39761
                     /locus_tag="PXB09_000162"
     CDS             39534..39761
                     /locus_tag="PXB09_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5232321.1"
                     /translation="MTQLLKHIVKQGERWDNLSYQYYGNAFEYGRIIDANPHIGFCEV
                     LPIGVTIYIPVLNVKPTNNENMPPWLRGRDA"
     gene            39754..40818
                     /locus_tag="PXB09_000163"
     CDS             39754..40818
                     /locus_tag="PXB09_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232322.1"
                     /translation="MRNVPKPDFSLFYEKTNITAEIEPHLVQLTYIDHLEGQSDELTV
                     EFEDIQGKWIRQWFPTQGDKLKAAIGYQGEFLTDIGEFEIDEVEYSYKPSTINLKALS
                     TGISKANRTLKPKAYENTTLAQVVAKVADNLKLKVVGKIKAIPIKRITQYQERDVEFL
                     ARLAREYHHSFKIVGNQLVFTDKSELGQSEPVLMLEERDTISLRLRDRIKDTAKAVEI
                     SGYDTSGKKVVKKRKKAKALRPNIKQAKSASEDTLKIITRGESQEQIDARGEAALATQ
                     NEDQAAGDIELIGNPKLVAGATILLRNFGVFSGKYLIKSSRHTISRSGGYTTHIEVRM
                     LEFIADDLITLGMEAGNANA"
     gene            40805..41341
                     /locus_tag="PXB09_000164"
     CDS             40805..41341
                     /locus_tag="PXB09_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5232323.1"
                     /translation="MQTHNFGATYQEGIVSAVDPKTHKVRCKIPALEDLETAWLSFLT
                     PNAGGNQFYCLPDVGELVAMLLDAQGEGGCVFGAIYNEQDPTPVADSDMWVKKFSNGT
                     EISHNRKTGDVVVKTNGHLTATAQGGATINANTVVNGTLHATGKITSDEEVSAPVVKQ
                     GTVELGTHKHGGSPEPNK"
     gene            41396..41758
                     /locus_tag="PXB09_000165"
     CDS             41396..41758
                     /locus_tag="PXB09_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5232324.1"
                     /translation="MNRQTSIQLTHWQLAPSTDTVEVVQGIDDIHLCIVNILSTQKGT
                     DILRPEFGSDHFRYIDYPEDVAIPNFVREITTALQKWEKRIEVEEVLVDGSAPHFIFT
                     VMWHLTDDVYREIYRTTV"
     gene            41768..42871
                     /locus_tag="PXB09_000166"
     CDS             41768..42871
                     /locus_tag="PXB09_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5232325.1"
                     /translation="MTEAIKIIDDDVKTVLAEAIADYEKRTGKILQPAHIERSIIQTY
                     AYREQLLRKGINHAFLQTFPQFATGIALDLCGETFGCYRLRDKPARTLLRFSVSGEHT
                     AIVIPKGTQVAINDELYFSTLNDDVITPLITYVEIDAECNQVGVIGNGWESGRVSKLK
                     TALATNYKVTVENIDITSGGLMQEEDEPYRKRILAAPEAFSNCGSIAAYDYHVRSVSQ
                     DIADVNISTPRGGLVRIAVLTQKGLPDTRLLDDIKKHVSAERLRPLCDMVEVIKPTER
                     RYQITARLILLDGYREDLVKAKAREALQLYLSDKTKKLGLDIVPSAIISALRVEGVYD
                     VNLIQPVKTIINETEWANCTAISVEVEEERRDG"
     gene            42864..43430
                     /locus_tag="PXB09_000167"
     CDS             42864..43430
                     /locus_tag="PXB09_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232326.1"
                     /translation="MASLHYADIIVRDPKYKALADLSKRLNLLDTSQIMTTLVDLLGD
                     ECIPLLAEKWSVTGYDGLLVADSENSKRALIKRAIELHQLKGTPWSIREVLRRLGFGE
                     VEIDEGLKNRLYESTYVSGIPENERWAHYAIRLSNPITNEQARNIRKVLRNFAPARCS
                     LAVLDYKADPIRYNNKATYNGTYNHGSS"
     gene            43440..45719
                     /locus_tag="PXB09_000168"
     CDS             43440..45719
                     /locus_tag="PXB09_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDL5232327.1"
                     /translation="MAGVQETAQWENHVYRIEENDPVHGGENGVTNKPIKHLANRTLY
                     LRRLLTEAGQRINPKKITATSKNSNDLTGHTHEIDHASLTQKGIVQLNASIQSTSTTE
                     SATPSAVKAAYDKAATAEQKATLANEKVEAIKVGGRNLLIQSNTPHNGNAYSVRYALA
                     EAPKVGEEIVVTLWGELGSQRTGIGVYNSQGATELAKLVKIRDGVYQGKGIWRKPMSE
                     GRERTPNDTHLNVYFYPKTATDNNRIERIQLERGSIGTDWTPNEADLKAEISAIRTKL
                     IPVRGGNVATTLNAAKRSDWFREMQIPYQSGWGYYTQAFHNSGTQHNYSNLPLTGRYY
                     FIAELYHNSGYSHLRITYPSLKRTFESAINLNNEDLILDWREVVFLKDGLYQGTFKTT
                     GTLESAYRLRAARDDERYQPYLQMVDMGYDLANPPVGKNKIIGSVDYYVKNGTSESSK
                     ATMMAAAMPDKNVFWEVALWNAAQQRNVLFKGYSKTNNLSIGKTTDNERDRVQVNGTI
                     QATAPADNANNDQVPTTAWVRKMAKILADGKVSKAGDTMTGHLFIKNGEYSAVHTYNT
                     SGWFAKWEAAPLSDSHFAAIVYANDRETVINRVLIPKKNGTVALINDIADTVRAAVSR
                     SDKSRSRTFPLQTGKKYTTTGSVTIYPDGRIVQIFHLKNIKAAWFDYEASAVGDRHRV
                     VNIPLWTAMPNKIFDVDVKTVRPSNNASTYYIEAAEWLSAWQIYGNDTNKSSVNINLS
                     RFRGGKDEDMDLYVTVEGY"
     gene            45720..46322
                     /locus_tag="PXB09_000169"
     CDS             45720..46322
                     /locus_tag="PXB09_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232328.1"
                     /translation="MAYFVNVIDEQGNYELIDDEFIGLYPDLDFNTLPKLTDKQYQTY
                     LAKANGKERFVNGEFVYEQIKVDMQAVISAEKSAKLAEINQKAQAFINDLAKYNETPK
                     FERDTWLEQAKEAKAWVADPTVQTPTLELIAQMRGIPLDTLRQKAYEKAMAYQTVAAI
                     VAGQRQGYEDRLEQAETLEQIQAIEPMYQLPQGANNEQTD"
     gene            46306..46581
                     /locus_tag="PXB09_000170"
     CDS             46306..46581
                     /locus_tag="PXB09_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232329.1"
                     /translation="MSKLTKLKSWSYHVLIAIDQLFNALTGGAADETFSSRCYRGAVL
                     AENPKKRWRFWHSFLNCLFLDPKHCYAAYKAEVHRKQYPKAFRLGGI"
     gene            46581..46868
                     /locus_tag="PXB09_000171"
     CDS             46581..46868
                     /locus_tag="PXB09_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232330.1"
                     /translation="MKKQNLKLVRGDDVSFRFSIKDSTGQPLALKDLWFDLHLVSYQG
                     EVLIALSTDDGSIETAEAGQMVLHFSHQQTARAEWTSANYDLQLTHDYTRV"
     gene            46878..47042
                     /locus_tag="PXB09_000172"
     CDS             46878..47042
                     /locus_tag="PXB09_000172"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232331.1"
                     /translation="MTSIIELDLTDDLIIEVQLDSTIITGDSFLANLPDLLQIYNQAK
                     SDSSKELNND"
     gene            47035..47739
                     /locus_tag="PXB09_000173"
     CDS             47035..47739
                     /locus_tag="PXB09_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232332.1"
                     /translation="MTKHKNHENHPIAITFYQLGKDVGDINRRLAVIEQREQSAQPSQ
                     PQAEAVTMPQQDAVAINNINAVLEAVEKYKTFEKYNTQWQERFEKFLSRNPNDYELSE
                     EQRQKLYHTMCQHLWQVNFTEINSKQYELPIPQQFQGKFGYIVKTSGGSTEISFELLS
                     ETHSTYLYPDSYIPEGGGDVMLKPAYIYLVIPDLVAMREPEVVGVSPLKLNILQKHLL
                     TPQKLQEQKPLNTKAN"
     gene            47908..48006
                     /locus_tag="PXB09_000174"
                     /pseudo
     CDS             47908..48006
                     /locus_tag="PXB09_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            48067..48855
                     /locus_tag="PXB09_000175"
     CDS             48067..48855
                     /locus_tag="PXB09_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232333.1"
                     /translation="MFLSHFKQVLNANIEADGKDWTIIDVFGGSGLLAHTAKREKPLA
                     RVIYNDFDNYAERLNHIKETNQLRQEIYQIVDEIIPKNKRISNEIKAKIINKINDFEG
                     FKDLKCLSSWLLFSGEQVATLDELFKHDFWHCVRQSDYPEATGYLDDIEVVSESFHQL
                     LPRFHDKEKVLLILDPPYLCTRQESYKQENYFDLIDFLRLIDLTKPPYIFFSSTKSEF
                     IRFIHYMVQNRKENWQAFEGAERIVVNASASYNGKYEDNMVYKF"
BASE COUNT        15322 a         9664 c        11177 g        12781 t
ORIGIN      
        1 acaaaaaaca acaaaaaaca cgacaataag atcgagtaat gattatatta tgttataatt
       61 tttgacctaa tttagaataa ttatcgagtg caaattatga atcaatctta ttttaactta
      121 ctaggaaaca ttacttggct atggatgaac tcctccctcc acaaagaatg gagctgtgaa
      181 ctactagcac gcaatgtgat tcctgcaatt gaaaatgaac aatatatgct acttatagat
      241 aacggtattc cgatcgctta ttgtagttgg gcagatttaa accttgagac tgaggtgaaa
      301 tatattaagg atattaattc gttaacacca gaagaatggc agtctggtga cagacgctgg
      361 attattgatt gggtagcacc attcggacat tctcaattac tttataaaaa aatgtgtcag
      421 aaataccctg atatgatcgt cagatctata cgcttttatc caaagcagaa agaattaggc
      481 aaaattgcct actttaaagg aggtaaatta gataaaaaaa cagcaaaaaa acgttttgat
      541 acatatcaag aagagctggc aacagcactt aaaaatgaat ttaattttat taaaaaatag
      601 aaggagacat cccttatggg aactagactt acaaccctat caaatgggct aaaaaacact
      661 ttaacggcaa ccaaaagtgg cttacataaa gccggtcaat cattaaccca agccggcagt
      721 tctttaaaaa ctggggcaaa aaaaattatc ctctatattc cccaaaatta ccaatatgat
      781 actgaacaag gtaatggttt acaggattta gtcaaagcgg ccgaagagtt ggggattgag
      841 gtacaaagag aagaacgcaa taatattgca acagctcaaa ccagtttagg cacgattcaa
      901 accgctattg gcttaactga gcgtggcatt gtgttatccg ctccacaaat tgataaattg
      961 ctacagaaaa ctaaagcagg ccaagcatta ggttctgccg aaagcattgt acaaaatgca
     1021 aataaagcca aaactgtatt atctggcatt caatctattt taggctcagt attggctgga
     1081 atggatttag atgaggcctt acagaataac agcaaccaac atgctcttgc taaagctggc
     1141 ttggagctaa caaattcatt aattgaaaat attgctaatt cagtaaaaac acttgacgaa
     1201 tttggtgagc aaattagtca atttggttca aaactacaaa atatcaaagg cttagggact
     1261 ttaggagaca aactcaaaaa tatcggtgga cttgataaag ctggccttgg tttagatgtt
     1321 atctcagggc tattatcggg cgcaacagct gcacttgtac ttgcagataa aaatgcttca
     1381 acagctaaaa aagtgggtgc gggttttgaa ttggcaaacc aagttgttgg taatattacc
     1441 aaagccgttt cttcttacat tttagcccaa cgtgttgcag caggtttatc ttcaactggg
     1501 cctgtggctg ctttaattgc ttctactgtt tctcttgcga ttagcccatt agcatttgcc
     1561 ggtattgccg ataaatttaa tcatgcaaaa agtttagaga gttatgccga acgctttaaa
     1621 aaattaggct atgacggaga taatttatta gcagaatatc agcggggaac agggactatt
     1681 gatgcatcgg ttactgcaat taataccgca ttggccgcta ttgctggtgg tgtgtctgct
     1741 gctgcagccg gctcggttat tgcttcaccg attgccttat tagtatctgg gattaccggt
     1801 gtaatttcta cgattctgca atattctaaa caagcaatgt ttgagcacgt tgcaaataaa
     1861 attcataaca aaattgtaga atgggaaaaa aataatcacg gtaagaacta ctttgaaaat
     1921 ggttacgatg cccgttatct tgcgaattta caagataata tgaaattctt actgaactta
     1981 aacaaagagt tacaggcaga acgtgtcatc gctattactc agcagcaatg ggataacaac
     2041 attggtgatt tagctggtat tagccgttta ggtgaaaaag tccttagtgg taaagcctat
     2101 gtggatgcgt ttgaagaagg caaacacatt aaagccgata aattagtaca gttggattcg
     2161 gcaaacggta ttattgatgt gagtaattcg ggtaaagcga aaactcagca tatcttattc
     2221 agaacgccat tattgacgcc gggaacagag catcgtgaac gcgtacaaac aggtaaatat
     2281 gaatatatta ccaagctcaa tattaaccgt gtagatagct ggaaaattac agatggtgca
     2341 gcaagttcta cctttgattt aactaacgtt gttcagcgta ttggtattga attagacaat
     2401 gctggaaatg taactaaaac caaagaaaca aaaattattg ccaaacttgg tgaaggtgat
     2461 gacaacgtat ttgttggttc tggtacgacg gaaattgatg gcggtgaagg ttacgaccga
     2521 gttcactata gccgtggaaa ctatggtgct ttaactattg atgcaaccaa agagaccgag
     2581 caaggtagtt ataccgtaaa tcgtttcgta gaaaccggta aagcactaca cgaagtgact
     2641 tcaacccata ccgcattagt gggcaaccgt gaagaaaaaa tagaatatcg tcatagcaat
     2701 aaccagcacc atgccggtta ttacaccaaa gataccttga aagctgttga agaaattatc
     2761 ggtacatcac ataacgatat ctttaaaggt agtaagttca atgatgcctt taacggtggt
     2821 gatggtgtcg atactattga cggtaacgac ggcaatgacc gcttatttgg tggtaaaggc
     2881 gatgatattc tcgatggtgg aaatggtgat gattttatcg atggcggtaa aggcaacgac
     2941 ctattacacg gtggcaaggg cgatgatatt ttcgttcacc gtaaaggcga tggtaatgat
     3001 attattaccg attctgacgg caatgataaa ttatcattct ctgattcgaa cttaaaagat
     3061 ttaacatttg aaaaagttaa acataatctt gtcatcacga atagcaaaaa agagaaagtg
     3121 accattcaaa actggttccg agaggctgat tttgctaaag aagtgcctaa ttataaagca
     3181 actaaagatg agaaaatcga agaaatcatc ggtcaaaatg gcgagcggat cacctcaaag
     3241 caagttgatg atcttatcgc aaaaggtaac ggcaaaatta cccaagatga gctatcaaaa
     3301 gttgttgata actatgaatt gctcaaacat agcaaaaatg tgacaaacag cttagataag
     3361 ttaatctcat ctgtaagtgc atttacctcg tctaatgatt cgagaaatgt attagtggct
     3421 ccaacttcaa tgttggatca aagtttatct tctcttcaat ttgctagagc agcttaattt
     3481 ttaatgattg gcaactctat attgtttcac acattataga gttgccgttt tattttataa
     3541 aaggagacaa tatggaagct aaccatcaaa ggaatgatct tggtttagtt gccctcacta
     3601 tgttggcaca ataccataat atttcgctta atccggaaga aataaaacat aaatttgatc
     3661 ttgacggaaa agggctttct ttaactgctt ggcttttagc tgcaaaatcg ttagcgttga
     3721 aagcgaaaca cattaaaaaa gagatttccc gcttacactt ggtgaattta ccggcattag
     3781 tttggcaaga taacggtaaa cattttttat tggtaaaagt ggataccgat aataaccgct
     3841 atttaactta caatttggaa caagatgctc cacaaattct gtcacaagac gaatttgaag
     3901 cctgctatca agggcagtta attttggtca cgtccagagc ttccgtagta ggtcaattag
     3961 caaagttcga tttcacctgg tttattccgg cggtgatcaa ataccgaaaa atctttctag
     4021 aaaccttgat tgtttcgatc tttttgcaaa tttttgccct aattacaccg ctattcttcc
     4081 aagttgttat ggataaagta ctggtgcatc gaggtttttc aaccttgaat atcattacgg
     4141 ttgccttagc tattgtgatc atctttgaaa ttgtactaag tggtttgaga acctatgttt
     4201 tttctcatag cactagccgt attgatgttg aattaggcgc taaattattt cgacatttat
     4261 tatcactacc catttcttat tttgaaaaca gacgagttgg agatacagtc gctagggtta
     4321 gagaattaga tcaaattcgt aatttcctta ccggacaagc attaacctcg gtgttagatc
     4381 tcttattctc ttttatcttt tttgccgtaa tgtggtatta cagcccaaaa ttaaccttgg
     4441 taattcttgg ttcattgccc tgctatattt tatggtcaat ttttattagt ccgattttaa
     4501 gacggcgttt agatgagaaa tttgcccgaa gtgctgataa ccaagcattc ttagttgagt
     4561 cggtaacagc catcaatatg attaaagcga tggcggttgc tccacaaatg acggatacat
     4621 gggataaaca gctggcaagc tatgtttcat caagtttccg tgtcaccgta ttagcaacca
     4681 ttgggcaaca aggtgtacaa cttattcaaa aaaccgttat ggtgattaac ctttggttag
     4741 gggcacactt agttatttca ggcgatctga gtattgggca attaattgcc tttaatatgc
     4801 tatcagggca agtgattgca ccggtgattc ggctggctca gctctggcaa gatttccaac
     4861 aagttgggat ttccgtcact cgcttaggtg atgttttaaa ctctccaacc gaacaatatc
     4921 aaggcaaatt atcactacca gaaataaaag gcgatatctc atttaaaaat atccgcttta
     4981 gatataaacc agatgcacca actattttaa ataatgtgaa tttagaaatt aggcaaggag
     5041 aagtgattgg gattgttgga cgttccggtt caggcaaaag tactctgact aaattactgc
     5101 aacgttttta tattcctgaa aatgggcagg ttttgattga tggacatgat ctagccttag
     5161 ctgatccaaa ctggctacgc cgtcaaatag gtgtagtgct gcaagataat gtgttattaa
     5221 accgcagtat ccgagaaaat attgcgctat cagatccagg aatgccaatg gagcgagtaa
     5281 tttatgcagc aaaattagca ggggctcacg attttatttc agaattgcgt gaaggttata
     5341 acaccattgt gggtgaacaa ggagcggggc tttcaggcgg gcaacgccaa cggattgcga
     5401 ttgctcgagc tttggtaaac aacccgaaaa tcctgatttt tgatgaggca accagtgccc
     5461 tcgattacga atctgagcat attattatgc aaaatatgca aaaaatatgc caaggcagaa
     5521 ccgtgatttt gattgcacat cgtttatcga ccgtcaaaaa tgcggatcga attattgtga
     5581 tggaaaaggg ggaaattgtt gagcaaggca agcaccacga attactgcaa aacagtaacg
     5641 gactttattc ctacttacac caattacaac ttaattaaga aggaaaacaa tgaaaatatg
     5701 gcttagtggt atttatgaat ttttcctacg ctataaaaac atttgggcag aagtatggaa
     5761 aattcgtaaa gaattagacc acccaaacag aaaaaaagac gaaagtgaat ttttaccggc
     5821 acatttagaa ctgattgaaa ccccggtttc taaaaaacca cgtctaattg cttatttgat
     5881 tatgctattt ttagttgtgg caattgtgct tgccagtgta agcaaagttg aaattgtggc
     5941 gactgctccc ggtaaattaa cttttagtgg cagaagtaaa gaaattaaac cgattgaaaa
     6001 cgccattgta caagaaattt tcgttaaaga tgggcagttt gtggaaaaag ggcaattatt
     6061 agtcagctta actgcattgg gttctgatgc agatatcaaa aagaccatgg cttcactttc
     6121 tttagctaaa ctggagaact atcgctacca aactttgctt actgccattg aaaaagagtc
     6181 cttgccggtg attgatttat ctagaaccga atttaaagat tcatcggaag aagatcgact
     6241 acgtattaaa cacttaattg aggagcaata caccacttgg caaaaacaaa aaacacagaa
     6301 aactttagcg tataagcgta aagaggctga aaaacaaaca atatttgcct atgtccgtaa
     6361 atatgaaggt gcaacacgta ttgaacaaga aaaattaaaa gactttaagg cactttataa
     6421 acagaagtct ttatctaagc acgaacttct tgcgcaagaa aataaattaa ttgaggctca
     6481 gaatgagcta gctgtttatc gctcaaaatt aaatgaatta gaaaatgatc tactcaatgt
     6541 aaaagaagaa cttgaattga tcacgcaatt ctttaaaagc gatgtgttgg aaaaattaaa
     6601 gcaacatatt gaaaatgaac gccaacttcg gctcgagtta gaaaaaaata atcaacgcag
     6661 acaggcctcg atgatcagag caccggtttc cggtacggtt cagcaactga aaattcacac
     6721 tataggtggt gttgttacga ctgctgaaac cttgatgatc attgtgccgg aagacgatgt
     6781 gttagaggcc accgctctgg ttccaaacaa agatatcggc tttgttgcag cagggcagga
     6841 ggtgattatt aaagtggaaa ctttccctta tacacgctat ggttatctaa ctggtcgaat
     6901 taaacatatt agcccggatg cgattgaaca acctaatgta ggcttagttt ttaatgcaac
     6961 tatagctata gataggaaga atctaacatc gcctgatggg cgaaaaattg atttgagttc
     7021 aggtatgaca ataactgctg aaatcaaaac cggtgaacgg agtgtaatga gttatttact
     7081 cagcccatta gaagaatctg tcacagaaag tttaagggaa cgctaatcga accaaaacaa
     7141 agccataaaa gccattttga gcttttatgg ctttattttt tagtccacaa gcggtcaaaa
     7201 aagcccaatt ttttacactt ttataacaaa ttgttctaac taaaaattac taattctttt
     7261 cttttataag acgaatcctc tattttcatt tcattaacat tgaactagaa aaggggattt
     7321 atgagcctaa gcattacgaa tctttctctt ggctaccgca aaaatcagca aaggcttatt
     7381 tgaaaagcac ggtgtgcagg tggaaaaacc ggtgatgttt cgcagctggg ctcagttggt
     7441 ggaagccttt ttaagtggca atgtgaacgt ggtgcatctg ctttcgccta tgagtttgtg
     7501 ggcgaaatat ggagcaaatg ctccggtgaa agcggtaatg tggaatcact tggcaggttc
     7561 ggctttaacg gttcgccctg aaatcaacag tattgccgaa ctctccggca aaacggtagc
     7621 aattccgttt tggtattcaa ttcataatat cgttttgcaa cgattattac gagaaaatgg
     7681 cttgaaaatc accgaaaaag agccgaaaag cggtgaagtg cgattaagtg taatggctcc
     7741 gtcagatatg gtggcagcgt tggcaagtga ggcaatttcc ggctttattg tggcagagcc
     7801 gttcaatgcg ttagcggaag ccaaaggtgt ggggaaggtg ctgcgtttta gtggcgatgt
     7861 gtggaaagat cacgcctgct gtttaaccct aatgcacgaa tacgatattc aacaccgccc
     7921 ggaatgggtg caaaaagtgg tgaatgtctt aaccgaagcc caagtgtcca cgcttgccaa
     7981 ccgtgcagaa accgctcaat tattggctcg gggcagcggc tacacgccgc acgatcaaaa
     8041 agtgctggaa aaggtactgg ctccaaccca agctcagtgg gataaatata tcgaaacagg
     8101 ggcaattcaa aaccctcagt ggcaccaaca gcgaatcggt ttccaaccgt atccgttcga
     8161 ttcctatatg gaagagctgg tcaaaatgct caaacagacc cacattgccg gcaataatgc
     8221 gtttttacaa cagcttgacc cggtagaggc agcgaaagcg attaacgagc cgacctttgt
     8281 gcgaaaagcg attgagcaag gcggttgggt tgaaaccttt aatttacaaa ccggttggac
     8341 aagaaccgag caaattagtg tataagcgat aggaacgaac gatgaaacag aaatatattt
     8401 acggcttagc cggtttatta ctgctacttt taggttggca gcttggcaca gccttgttaa
     8461 gccaacggtt gccgatggcg tcaatgttag ctccggcaaa aacctgggaa agttttactt
     8521 ggctgatttc ctccggcgaa atttttccgc acttatgggc gagtttgcaa cgcattgctg
     8581 tcgggctact cgctgcgtta gtgattggtg taccgctggg cttattgctc ggcttctcca
     8641 agcaccttga aatgctttgc acgccgtcat tccaactact acgtatgatt tcgccacttt
     8701 cgtggatgcc gattatcgtg atgttacttg gtgtaggcga tttgccgatt tattttttac
     8761 tggcgtttgc caccgtttgg tcgttgatta tttccaccac ctcaggggta aaaagcattg
     8821 atccacaatg gttacaactg ggtagagtaa tgtcggctac ccgcaaagaa ctgctgtgca
     8881 aaattgttgt accggctatt accggacacg ttctcaccgg tttacgtgtg gcggttggga
     8941 ttgcgtgggt ggtgctggta ccgtgcgaaa tgctaggcgt gaatcaagga ctcggctatt
     9001 ttattttaga cacccgagac cgattagcct attccgaact gatggcggta attataatta
     9061 tcggcttaat cggctgggcg ttggatagct taatccgctt ggctttagcg aaaggcggca
     9121 gataaattga caagcggtcg aaaaattgca tttttttgca aaaaatcgac cgcttgttta
     9181 ttcccaaaaa gcatattacc ttaatttatt ttatttctag ggcataaaaa agcgatttaa
     9241 gatagcgaca aagtaaacta attatacgag gtaaacacaa tgtcggttct ttcatcttct
     9301 tttattcaat ggcttcagca gaacgccgaa aatttagatc aatctaacga acgagcggat
     9361 ttactcattc cacaaattgc cgcactaggg ctatataaaa tcggcgtgcc ggaaacgctt
     9421 ggcggcagcg gtggcacttt ggttgatgcg atcaaagccg ttaccgaact gggtaatcac
     9481 tcgctggctg cggcatttgt ttcgtgggga catcgtacct ttatcgagca tattatcgcc
     9541 tcaaaaaatc ctattccccg ccaaagctat ttggcggatc tgctaaatgg caatttaacc
     9601 gcaggaacag gtttatccaa tgcgatgaaa tttctctccg gcattgaaga gttgaatgtg
     9661 aatattcgtg aagaaaacgg taaacgctat ttaaatggcc gcctgccttg ggtaaccaat
     9721 ttacgttcat accgctttgt tgctagtttc gttgccggtt ttcaagacga acgcaaaccg
     9781 ctagtgattg caattccctc caccgccaaa ggcttaaccc gcaccaaaga attggaattt
     9841 atcgcattgc aaggcacgaa tactacctct ctcgtatttg agaatgtgga attacaagat
     9901 gaatggattt tggctgatga cgcgcctgag tttttagcag ccactcgccc tgcgttctta
     9961 ggtttacaat ttggtttgcc ctttggcttg gttgaacgta gtttggcgga aatcgaaaaa
    10021 tcgctccctt tccgtgcaat tctcgcctct gagtggcaag ctcaagttga tgccctcaac
    10081 gatattaaaa ctcgtctgtt taatggctta aatgaagaag gttattttgt gcgtaatccg
    10141 aaagagcttt tccaagcgag aattgacatt gtcaatgtcg tcgcccaaac tattctgcta
    10201 gaactgcaag cgagtggcgg acgtggctat ctgaaaaatg atacttcagg cttcagccgc
    10261 cgttggaaag aagcggcatt tctgcccgtt gttacgccaa gtgcggtaca gctgagaatg
    10321 gtgctggcga atagttaagc ggataagaga caaattgttg cctcttttat tttgcaaaaa
    10381 atagtctaaa tataaccgct tgcaataaaa ataaaaaagg atgcattttt tatgcttcct
    10441 caattttacg gctatctatt atgcaaaagg ctgcaattca gggttaattg gaatttcggc
    10501 aatgttgtta acgtagttac ataatgttgc caagctcacg cctaaaatca catcaatcgc
    10561 attttgttgg ttgtaacctg cggcaaaaaa ttcgtttaat tgggcttcgg ttaatttggc
    10621 tttttgtaac attactgcaa gggtgaagcg agccagagtg tctaatttgt tatcgtctat
    10681 gcgagccgtg gcacgtaaag catttaccac ttcttcaggc atttttaatg cttttaaggc
    10741 gattttagta tgacctgcca cgcagaaacc acagccgttg accactgctg cggtgatttg
    10801 taccacttca cgttcttcag cggttaagct gttacgacta ttaataccac ccacagtgcg
    10861 gtaagtttcc agtgctgttg gtgcgttggc taatacgccg atcagatttg ggataaaacc
    10921 gtttgcttgt tgcactgctt ttagggcttc ttgtgccgtt tcaggagcgg attcaatagt
    10981 gtgaatttga aattgagaca taaatgttcc ttatcaggtt gtttattggt gtggctcatc
    11041 ataaagaaaa ggctaattta gaacaaatca aaatcactat ttaatataac taaaagatct
    11101 taaagggagt atagttgcct atactccctt tgtttatgca caggttgcgt ttttactctt
    11161 ctgcgtcttc ttttgcccat tctaatgagc ggcgaacggc ttttttccaa cctttatagc
    11221 gtttcgcccg tttttcttgg tcgccgtccg gtgtgaaggt gcgttcaatt tccgctttgt
    11281 ctttcagttc ttccaaatct ttccagaagc cgacagcaat acccgcaaga taagctgccc
    11341 ctaaagcagt gacttctttc actttcggac gctcaacttt ggtgtctaaa atatcggctt
    11401 ggaactgcat taagaagttg tttgcggttg caccaccgtc cacacgtaac gcttgtagtt
    11461 tcgctttgga gtcagactgc attgcttcta acacatctcg ggtttggtaa gcgatagact
    11521 ctagggtcgc acgcacaatg tggttacggt ttgccccacg ggttaaaccg aaaattgagc
    11581 ctcgtgcata cggatcccaa tatggagcac ctaagccggt aaaggcaggt acaacataaa
    11641 caccgttaga gtcatcttct ttagtggcaa aatattcgct gtcaaagcta tcgtgaacaa
    11701 ttttcagctc atcacgcagc cattgaatag acgcaccggc aataaatact gaaccttcca
    11761 acgcatattc cggctcgcct tttgcgttac acgcaatggt cgttaataaa ccgttttcag
    11821 attgaatcgc agtgttaccg gtgtgcatca acataaaaca gcctgtacca taggtattct
    11881 tcgcttgtcc ttctttcacg cataaatgac cgtagagagc ggcttgttgg tcacctgcaa
    11941 tacccgcgac cggaatacgc acaccgcctt gaccgccgat attagtttgc ccgtaaactt
    12001 ctgatgaatt tttcacttca ggtaacattg agcgtggaat attgagcaat tccagcattt
    12061 tatcgtccca ttgtttggtg tgaatgttaa acaacatagt acgagaagcg ttggtgtaat
    12121 cggtaacgtg tacccgccct tgggttaatt tccacaccag ccaagtatcg accgtaccga
    12181 acagcaattc gccacgttct gctttttctc ttgccccttc tacgttatct aaaatccact
    12241 tcactttagt gccggagaag tacggatcga ctaccaagcc tgtcgtttta cgaatatatt
    12301 cctcgtgtcc gtctgctttt aatttatcgg taatatccga tgtgcgacga cattgccaca
    12361 caatcgcatt ataaacaggt ttaccggtct ctttttccca cacaatcgtg gtttcacgtt
    12421 ggtttgtgat cccgattgcg gcaatgctat ccggcttaat accggctttt gccaccactt
    12481 catttaaggt ggaactttgg cttgaccaaa tttccatcgg gttatgttct acccagcctg
    12541 cttgcggata aatctgggtg tatagaacca ttaaaactaa gaaataaaag aataatagga
    12601 atttggcgga atttttcggg aataagtgaa acagaagtat tgaaaacagg ggctttgcgg
    12661 tgcattgccc ctttgtttta tgtagaaaaa agtaaaaata atgaattgcg aaaaaatggc
    12721 taaaactaac cgcttgtacc attaaaacaa cgaaaaagta aaaatgattt aagtagcttt
    12781 aaatggcgtt taaatcatct cgtgtccaat gtacacaacc tgcccgataa cctcaaaatc
    12841 taacgtttca tcaaaaatca catcaatagg gctgtatagc tctttattat cgctgattaa
    12901 gcgaataccg cccataatgc cttgcacacg tttaacccaa agctgctcgc cttggcggaa
    12961 cacataaatt ttaccgtctt taggctgggt ggtggctcgg tttaccaata gcatatcgcc
    13021 atcactgatg gttgggtaca ttgaatcacc tgaagcggta ataaatgcaa gatagctcaa
    13081 atagaagcca cgcacatcta gccatcgttt acttagccca atatagtcat caggggcata
    13141 cacctcgcta ttgaaagcac caaagcctgc tgaagcctgt acattataaa acggcacacg
    13201 ttccatttca tctgcagttt gggctgccac taatgttcta ggctcttctt ttactgccgt
    13261 ttgagcaaag cctaactctt gctgcacgct tattgggaga gagctgtagt ggtattcaaa
    13321 agcaaccccc ctttttccct ctatttgtct tttgagccaa ttatttttgg tagctcttct
    13381 tgttacattt gatggttgtt caggtaaatt tcccattcca gctacttcag atgccgtaaa
    13441 ccattccttt ctaattatag aattcataaa accccttttg aattcaagtg gaattcaaaa
    13501 aaatttacaa acaaattctc ttgaaaatca attagttaat taaataaaac cgaaaaacac
    13561 taaattcttt tgaattctct tattgaattc atttggaatt cactatatta ttcgttctgt
    13621 agttaaatga tttacatcat ttaagtagtt tctaaaacta actttcaagg atctcacaaa
    13681 atggcaagaa ataaaagagt tcgagatatg agtaatttcg aaattcgtgg tgagctgatg
    13741 aaaatcggta agtccttatc tcagttaggt attgagaatg gattagcaaa aaccacagtt
    13801 cgtaatgcgt tagataagcc atatcccaaa ggggagcaaa ttattgcaaa agcgattggt
    13861 aaaacaccgc aggaaatttg gccctctcgt tacgaataag gagcttttat gaaggaatgg
    13921 tttttagcca aagaaatcgc aggattatct ggagttccag aattaccgaa tagcgtttca
    13981 agattggcaa ccaaagaagg atggcaaaaa cgacaaattc aaggtgtaag aggtgttact
    14041 tacgaatacc acctcaccag cctacccatt gaaacccaac aacaacttag actaaacgcc
    14101 gcccttgcgg taataccgca agcggcagaa ctacaaccca aacgagacga ccccgcactt
    14161 atcgcaaggc tcaataatgc caccgataaa ggcagggata aagcaaaagg caaggcagaa
    14221 gcctgtatgc agttgcaagc ctttctcgac caagggttta gttatacgca ggcagaagcg
    14281 ggagcggcaa ccgctaaaaa tgtgtcgcaa ggttctttaa aaaattggta ctacaaagtg
    14341 aaaggtcacc ccgtccattt atggcaggcg atcttaattt ccgaaagcgg taggagtaaa
    14401 aagccgcagc tgaaagccaa gattactgaa gaagcgtggg actgcttttt ggcggattac
    14461 ctccgccctg aaaagccgga tttacgggca agttaccgcc gaacccaagc catcgccaag
    14521 caatacggct ggcaaatagc aagtttacag actttccaac gccgagtgtt ggcggaagtg
    14581 ccttacgagg tgattttgct caaacgggaa ggagcaaatg cggttgccaa gttagtgccg
    14641 gcactacaac gcacggtgaa agatattctc gcaggagaat ggattaacgg cgatggctat
    14701 caacacaatg tgtttgtgaa atggcacacc ggcgagattg tccgccctaa aacgtggttt
    14761 tggcaagatg ttcgcacccg caagatttta ggttatcgaa catcgatttc ggagaatact
    14821 gacagcatac gccacgcatt aatggatgtg atttttaacg taggcatacc gaaaacgctc
    14881 acgctggata acacccgagc agcagcgaat aaggcaatga ccggtggtat tgaaaaccgc
    14941 taccgcttta aacataccga gttagacccg aaaggcatta tgccgatttt agggattgat
    15001 gtgcatttta cctcaattct ttatggtgaa ggacacgggc aagccaagcc gattgaacgt
    15061 gctttcgggc gaggcggaat tggcgagaaa atagataaac gccctgaatt aagtggtttc
    15121 tatacgggca gaaatgcaca agaaacccct gataactata acggcggtaa agacggtgtg
    15181 gattacaaca cattcttgaa agccatagca gcagggatag aagagtacaa ctctcaaacc
    15241 gaacgccata ccgaaatgtg ccgaggagaa ttgagtttta accaagtttg ggagcgggat
    15301 taccacccaa gcaacgtaag acaagccagc cctgaacagt tgcggttact gttcttacag
    15361 gcagaaacgg tcagcattaa acgcaacggc agttttacgc tgaaagcagc cggcaaactt
    15421 tacggcttaa ctaacgttta ctgggcagaa agcctgatag ggataacgga taagaaagta
    15481 gtggcacggt tcgaccccga tgacttacac ggcaacgtgt atgtgtacaa cctagagggg
    15541 caattcttag ccgaagcggt ttgccgagag gcgaaaggat ttggtgatac cagtgcaagc
    15601 cgtgagcaag gtcgcttata tcagaaagta gtgaaaagtg ccaaagctca agccgaagcc
    15661 cttgaattac tggaagctca cgaactggca agcctcgccc cacaagtgga cgtgcctgag
    15721 ccgatagaga agaaggtaaa agaggtgctg gtgaaagaag attttatcgt ggatttcaac
    15781 actgtgcgta aagcaacggt ggtggaagaa accgaagaga tcagtatttt tgatgaagtg
    15841 ttactgaaac aagagaaaca acttcgcata gtggaataac tagcggtcag tttttgcaaa
    15901 aaatttgcaa atttttctaa aaaaacgacc gcttgaaatg agatttaaac agggtttaaa
    15961 cgcctttaag gagtaaaaaa tgacattaac agggcaagct taccgagtga ttttcaagga
    16021 actcaaagag caacaagaga gtgaatttga acaggctttc aagaaaggga ttgccaaaat
    16081 tcagcagaat caaactcagg aatccattct ggtaaaccgt gatatgtttc aagctgaaaa
    16141 gctaacactg ctttcacaaa agttggaagc ggttgagcaa ttacttcgcc ttgaattaaa
    16201 tcagccgaat tttcaagcaa aacttgaaga ctacgctgac gcattacgaa caaccatttt
    16261 aagtaaagta gccaaataag agctttagac tcttgaaggc ttaacatctg agccactttt
    16321 tttactgtcg gcattatacc gtcaagatca tcaatagaag ttaaatgatg aaaagaggaa
    16381 tggtattcag ctaaacaaaa attgattgta ctaagtttaa acaaagtaat gcaatttttc
    16441 atcacgatgg catttgctcg ttttaactta aaaccagaga aggttgcacg agcagaatca
    16501 agggctattt gatgaatttc atcatctgtt aaagaacgaa agagcataaa aacctccaaa
    16561 caaaaacagg acaccattat gacattaatc gaccaaatta aacaacacat cgccgaaagc
    16621 ggcagttctc aggggaaagt tgccaaagaa gccgggatta atgccggggc gttatcggct
    16681 tacctgaatg aaaattacaa aggcaataat gaagaacttg aagcaaagct gattgcttat
    16741 ttagagcgta ttgaggcgaa gaaaagagag tttgtcgaag ctccgagttt tattgaaacc
    16801 aaaaccgcaa accaaatttt cggttcgtta cgatttgctc aaaatactgg cgtgcttgcc
    16861 attattcacg gtgcgagtgg cgtgggtaaa acacaagcgg ctagagagta tcgtaaacgc
    16921 tatgcgaatg tatggttggt taccgcaagc ccttctcgtt cctcattaag tgaggtgtta
    16981 tatgaaattg ctcttgaact tggaatgaac gatgcaccac gccgcaaagg gacattggct
    17041 cgtttaattg ttcgcaaaat gaaaggcaca gcaggtttat taattattga tgaagcagac
    17101 catttacctt acgaagcctt agaagaatta aggctgttac aagaagaagt agtgaatgaa
    17161 agtgacatcg gagctggtgt tggcttagtg ctgattggca atgacaaagt ctacacccga
    17221 atgaaaggcg gaattaaccc tgctcacgaa tatgggcgac tttggtcacg cagtgccaaa
    17281 cgcaccagta ttcagaaaac caaaaaagaa gatacccaag cggtagccaa agcgtggggg
    17341 ttgagtgaaa accaagaagc actcaaggta atgcaagcca ttactgaaac tggtggcgga
    17401 ttacggattc tgacacacac cttacgatta gcagcgatgg tagcaaaaga ccgaatgatt
    17461 cccttaactg ccgatttaat tcagctcgca cgtaaagatt tactctcaac aggagattaa
    17521 caatgagaac cccaaaaccc aaacacagtt ttaaccgcac caaccaagca gcgtgccgtt
    17581 ttttaaaaca aacccaaaag gcaattatcc gcttaaacag tcttggcttt acggtgctga
    17641 atattgattt tacccgtatt aagccccgca ttgaggtgga aatcggcaat aacaagcaca
    17701 ttgctcaagg cttgatttat gagggtaaag cctaccgcta cagcttcggt aaaagcgaag
    17761 atttaggcag atgggaaggc tactacacca tgctggaagg tatcagagtg tggtggcgac
    17821 aagcagcaat tcactaggag aaaaacagat gaaaacctta gcactattaa ccgccctttt
    17881 agggcttgta gggtgtgatt tagtccaaag caaacaagct aaaaattaca tcggcaacaa
    17941 tttaactgaa atctgtatag ataacgtggt gtacctgatt tattccggtg ataaaaaagg
    18001 cggaattacc ccgaaagtaa ataaagattt ttacccttat acctgtacaa acaaagagga
    18061 aagacaaaat ggcaaaaccc gatgaaacac ccattacaaa agcagaatgt caatctcagc
    18121 ttgcagagtt gggggtgcaa tataaaaaac tgccaatggc aattacaaga catatttgta
    18181 atgccacaac caatatacac ggcaaagtta taaaggtcag tgtggtagag agagttggat
    18241 atggcgtcca gattaccgca caaggtaacg agaaatcttg cttagtaacc tatgaagcaa
    18301 tgttaggtat ggcagaagca atgggattat ttgatgaagt taaggagcaa aataatgact
    18361 aaaaaaacaa ccagagtaaa aagtgcaacc caaagtgcga tttatcaaag ccgagatgaa
    18421 gtgcaagtgg ctataaaaat cattggtgat aaacagcgtg aattgcaacg tttagctacg
    18481 gcaatgaatg atgaattagc tgctattagt gccagttatg ctcaacataa ccgctaccaa
    18541 cattatgccg agaaagcggc tgaagcagaa cgcaaaggca actataagga agctcaagac
    18601 cattgggaag ttgcaaaatt atcagcaaaa aagaccgcta accgagactg ggcggaacaa
    18661 cgagcggaat tttgtaaacg tatgcacaat aaaccgtttt agggggaagt gatgacagaa
    18721 accgtaaaag cacaacttaa cagccaatta aatgaggcaa ttatccagtt gatacaagct
    18781 caaaagtatt taaaccaaga tgatgccatt cgcagtggag tgtatatcgg tacggtgcag
    18841 gatttattgc caaaggtgca tttaaagtta ttaacggcaa atcgtaaaca ttgatagaga
    18901 tgaggtaaaa atggctatta cagaagaaca atggaaagaa attaagcaaa agctagatag
    18961 tatcataggg agagttaaat ttagatacaa agagcattta ctcacggtag atgttgtaca
    19021 aattaagcga tctttaaaat tggctgtgta tgttgatggg gaaattgatg gagcttggac
    19081 aaaagaagga cacgaaattc gcccttattt agaagaagtt tggtatcgca aagaacgccc
    19141 tttttttaat gctaaggaga agaaagagta tagaggttta atgagcaaaa aaaaactgaa
    19201 tgaaaaaata gtaacctact cacctatgtt tccatcacca actgcactga ctcgtcaata
    19261 taagaaacta gatggcttag agttgattga agtgatttaa aacccattta cagcccattt
    19321 aaccccgagt tatttaaagg acaacaaaat gaataaaaac gaatttttta agaaatacca
    19381 cctagagggt tcactagcta ttttggattt ggatgcaaat gacgatcaaa gccaattctg
    19441 ttaccaagca ttgttggagt atagagaact cccgttagac acatttcttg cagagtactc
    19501 agatgatgag gatatgacag agtcagagtt tattgagtta atgcttgatg aattagagtg
    19561 gattatccgc agagctaaga atgctaaacg gtttgttaaa aaacgacaaa aaacgatgag
    19621 ggaggaaatt atgtaacagc tcaacccaac caacgccaca tcatccgtct agctgagaaa
    19681 caggtgtggc gtttgtttta agtgggcaat caaaagcgat aacgttttta attgtttatt
    19741 tatcggagta acaaatgaca gacaaagcca agctaatcca gcttatccat attgccaagt
    19801 cgcaactagc aatggacgat ttaagctacc gtgaaatgct gaaacggctc accaataaaa
    19861 ccagctcgac caaatgcacg gtggtcgagt tgcacaaagt cttacacgaa ctgcaaacca
    19921 aaggagcaaa agtaaaatat tttgccaaac gcagcaaaaa accgaccgct tacagcccgg
    19981 caacagggga aacagcggta aaaagccaaa ttgctcataa aatccgagcg gtatggataa
    20041 caatgggcaa acacggattt ttaaacgacc caagcgaaaa agcattaaat gcttatatgc
    20101 gtaaggttat caataataaa actagaccaa caatattatt aaatgtctct gcattagagg
    20161 ctggagatgc aagttatatg cttgaaatcc tcaaaaaatg gcataaacgt gtgatgatta
    20221 aagccctaag caaaagttgc acagttgatc caaagataag ctacgatgaa ttagtggagt
    20281 ggtacaatga agttatgtag atgcccgatt tgccacagtg atatacacct agaagctctc
    20341 gtagaagatg aagccgggcg tgaactactc ggcaaaatca gccaattaac acacggtgtt
    20401 gctcaaccga tggttgctta tttaggctta tttaaaccgc aaaaaagtaa ccttaataac
    20461 tcaagagcct tgaaaatact caatgatgta ttagcactct acccttgctc attgctactg
    20521 gctcaagccc tatctgaaac ggtagtaagc atacgcaaaa aacgtcagca agcaatggaa
    20581 aacgggcaga aaattgaacc gctaccgaac cataactatt taaaatcggt gtatgaaacg
    20641 caaaaagtcc attttgctgt ggtgagaacc ggcaaaaccg aacgcgaaac aatgaaagcc
    20701 gaactggaaa aaacacgcaa tgcgattgcc tatgtgcaac ggtttgttga tttaggacgt
    20761 gaagaggttg ttaaaaatag ccctgagtat cagatttggt tagctcataa acccaaataa
    20821 cacaagccac caaaaggtgg ctttttaact ttttgaaagt gcgataaaac ctgatttaaa
    20881 caggctttaa acgggtttta agattgagtt taaaaaaata tttcacaaaa taagaatggt
    20941 tttttataca ataaccgaaa cggtttttgg ataggaaata gacaatggaa ttagtggata
    21001 tttttgaaga aaaagccccg gaagtgttaa ccgatttagc caaacatatt gaagtcgcat
    21061 tagaagaaaa atgccaattt agccccgaaa aggcaaagca aatcggtatt gatattgccc
    21121 aacaaatggc tcaaaactgg ggtggcgagg taatttatat tcctcgcaat ttgttgatgg
    21181 ctcttaatga gcgagatatg aaaatttacg aagagtttaa cggtaacaat caccgtgaat
    21241 tggctcgtaa gtacaatgta tcaatgcagt gggtatataa aattgtgaag aaagtccata
    21301 aggacgaagt tgcccgcagg cagatgagta tgtttgagat gtaaatcatt ttttcccagc
    21361 cctgatcatt ttcagggctt tttgtgtatt aaaagaacgc agtctttaaa cccgtttaaa
    21421 atcaattttt cagcaaattc tttaaactcc ttttaaagca attttaatag gagtgtgcta
    21481 tgtctcaaaa tcttaccttt cgccaaattt ttgaccgttt aatcggacac gagggcggct
    21541 atgtcaatca cccacaagac ccgggcggag aaacccactg gggaattacc aaacgtaccg
    21601 cggttgctaa tggttatatg tatgcaatga agaatatgac ccgtgagcaa gcctaccaaa
    21661 tctacgaaaa agccttctgg caacgttatc gttgtgcaga gcttaagcca gcagttgctt
    21721 atcaattttt cgacgcagtg gttaatcacg gttttggtaa tgctagtcgt atgttacagc
    21781 gtgcagtagg cgtagcggat gatggcatta ttggcaatat taccctgcag gcaattaatg
    21841 caaaatctga aagcgatctc ttaatgctat ttaatgccga acgtctgaag ttttacacaa
    21901 aattacgcaa cttccccact tttggtaagg gttgggtcaa tcgtgtggca ggcaatttag
    21961 aatacgcagc acaagataat gaggtttaaa aatggcaaaa ctatttaaag aactactctc
    22021 aaccaatggc acattatcca ccactagcac cgtgcagttt tttggcacat tgtgtgtatt
    22081 tggtttaatg gtttatgcag taattaccca acaaccttat gccgaaagcc tattaaataa
    22141 tgtgttgatt tatctttttg gggcaactac cgctaagggt gtagtaacca gctatcaagc
    22201 caaaattaaa gggggtatcc ataaacaaca aagtacattt aaagaggagg agggatgtta
    22261 atgcaacaaa ttttaggcgt gattggcgtc atcgcagcaa tattgtctta tgctttgttt
    22321 aaaagctggc aactaaaacg tgagcgtaaa aagaatgcca tattacaagc tgaaaaacag
    22381 caacaagcgg ttgaaattga gcaaaaaaaa gcagaggtaa aatatgtgta tatatcaaag
    22441 aaaaacaatg aaaaagttac tcgcagctct gctagcgata ttgatgacaa gttgcagcaa
    22501 cacggttact tccgtgacaa caacaggttg cacggcgttc agtctgattt atccgaaccg
    22561 tgcggatacg ctggaaacga aacgtcagat tcttgctcat aatctgactt ttgaggaaat
    22621 ttgccaaaat gaaatacatt aaaaaattac gtaaacgctg gcaaatttgg cgttttttaa
    22681 aaaatcatcc tgaggttgca caacgccgag atttattagc gattgccatt aaacagggcg
    22741 tagaaaaccc tgtagggcgt gcaagacgga gggagccata atggatttat ttacagtctt
    22801 ttgggagtct atccgtgcta actttggttt tatttctgcg ttactcacca ttgttgttac
    22861 ggcattttgg ctcaagctag atagcaaata cgccaagaaa aatgatcttg gtgaattgct
    22921 ggaaattgcc aaaagccacg ataaccgctt aaccacctta gaaaccaagg tagaaaacct
    22981 gccaagtgcg gtggacgtgg aaaagctgaa aaccttagtc actgatgtaa aaggcgatac
    23041 caaagccacc tcaaagcagg tggatagtat cagccaccaa ctcggcttgt tattagaagc
    23101 aaaattaaag gaatgatatg tcgttaagag atttactcac tcaagaccaa cggctggtga
    23161 ttttacgctc attagcggaa gccggctatg atgccaatga gtcaattatt agtgattgcc
    23221 tagatttata cggtcacgat attagccgtg atttagttcg cacccattta agttggcttg
    23281 aagagcaagg cttacttacc ttagaacgtt tgcgagatgg ctatatggtg gcaagcatta
    23341 cccagcgtgg cttagatgtt gctcaagggc gtgttgtggt aagtggcgtt aaacgccctc
    23401 gccctaaaat ttaaacggta tttaaggagc gtttaaatga gcgagaaaaa tactcgtggt
    23461 cgagcatcaa aagtcgattt actgccgccg aatattaaaa cccaactggc gatgatgttg
    23521 cgtgataagc agtactctca gtcacaaatt ttagaagaaa ttaatgactt aattcgggat
    23581 tgtggcttgc ctgatgaaat gctgttaagc aaaaccggat taaaccgcta cgcaagccgt
    23641 atggaacgct taggggcaaa aatccgtaat gcccgggaag ttgccgaaat ttggactaag
    23701 caattcggcg aaatgccaca aaccgatatt ggcaaaaccc taatggaaat ggtcaagcaa
    23761 attgcctttg aaacctcatt gaaattaggc gaacaagaag gcggtattga gccaaaacag
    23821 cttgctttgc tctcgtctgc tattcaacgt ttagaacaag ccgaaagttt gagttttaaa
    23881 cgggaacagg caatccgtaa agaggtcgca caacaagccg ctgaaaccgc tgaaaaagtg
    23941 gtggtgcaag cgggtttatc cgctgaaacc gtccgtacga ttaaagagca aattttagga
    24001 attgcataat ggcactactc aataacagac cgctgaatga attagcccct gaatgccgtt
    24061 cgtttttaga gagcattcac gcttttaatc ctaacgaact gttattgggc tatcaaaagc
    24121 ggtggattgc ggacgacagc caactcaaaa ttgccgaaaa aacccgccgt tgcggtttaa
    24181 cgtgggcaga agcagcagat aacgccttaa tcgcaagcac ccgcaaatca gacggtggct
    24241 ctgatgtatt ttacattggc tcaaataaag agatggcacg tgaatatatc gatgctgtcg
    24301 caatgtgggc aaaagccttt aatcgtgtgg ctggagaaat ccaagaagag atctttgaag
    24361 acgaagataa agacatctta acctatgtaa tctacttctc atcgggtttt aaggtcaagg
    24421 cattatccag taatccgaaa aacctgcgtg gtatgcaggg cgtggtggtg attgatgagg
    24481 cggcattcca cgaatactta gcggaagtct tgaaggcggc gttagctctc acaatgtggg
    24541 gggcgaaagt ccgtattatt tcgacccaca acggctcgga aaatctgttt aatgaactga
    24601 ttaccgatag ccgtgccggc cgcaaacgct actctgtgca tacgattacg attgaagatg
    24661 cctgccgtga tgggctatat caacgtatct gccaagtagt gacgaaaaaa acgtggtcac
    24721 cggaagcaga aaaagagtgg attgaaaacc tactcaacga caccgccagc gaagaagacg
    24781 cattggaaga atacttctgc gtaccgaagt tcggctcagg cttatggctc tctcgtgctt
    24841 tgattgaacg gcagatgagc gaagccacgc ctgttatccg ctttacggca aaagatggtt
    24901 tcagccttgt ggctgaaccg acacgctatg cggagattgc cgaatggtgt gaattagaac
    24961 ttgagccgat attggcaacc cttaaccctg atttgttgca ttttatgggc gaagactttg
    25021 cacgcagcgg cgatatgacc tctctggtgg tgcttgctca gcaacaaaac cttgttcgta
    25081 aagtcgcctt tattgttgag cttggcaata tgccctacaa gcaacaagag caaatcgtga
    25141 tgtttatgct taaacgctta ccgcattttg ccggtggggc ttttgacgcc cgaggcaatg
    25201 gtggctattt agccgaagct gcacgagatg aatttagcac cttgattgac tgcgtgcagt
    25261 tatcggaaaa atggtatcgg gaacacaccg ccccctttaa agcggcattg gaagacggcg
    25321 agctggaagc tattccaaaa gatgcggata ttttggctga tttgcgttca tttcaggtgg
    25381 tgaaaggcgt accacgcata ccggataaac gcactaaaag tgcagatggg aaaagcaaac
    25441 gacacggtga taccgcaatt tctttgctgt tggctcatta tgccagccga caattagtgc
    25501 aaatgccagt tgagccggta tcacgccgtc cacgccatag ccaacaatta acagaaggat
    25561 attaacaaat gagatatgta ccactttgtt taatgatgtg tgcctcattc tacctattta
    25621 ttaacaacat tgacggctgg ggttggggaa ttcttttatc ttttatttta gcgagtgcag
    25681 cttatggcaa agaagaataa tttaattagt gaaattgcca cccgtgccag aagtattgat
    25741 tactgggcat ttggctatta tctgccgaac cctgacccga ttttaaaacg aatggggaaa
    25801 gatatttccg tttaccgtga gttgttatca gacgggcaag ttcgctcagg cgtacgccgt
    25861 cgaaaagcgg cgattaaagg cttagagtgg cgaattacca ccactaacaa tgagaaagtg
    25921 gacgagcaga tttatcaaat atttaaccgc ttgccgatga ataacctgat taccgaaatg
    25981 ctcaatgcag cactctatgg ctaccatatc agcgaggtta tttgggcaaa agagggtgag
    26041 ttatttgtgc caacagaaat cattggtaaa aagcctgaat ggtttatgtt tgacgacgaa
    26101 aacctactgc gtttccgtac caaagaaaac tgggcggacg gcgaattatt accagatgat
    26161 aagttcttgc ttactacgca agaagccacc caagataatc cctacggttt aggcgattta
    26221 tccctctgct tttgggcggc gacctttaaa aaaggcggtt tcaaatactg gttggaattt
    26281 accgaaaaat acggctcacc gtggttgatt ggcaaacacc ctcgccaagc tcacaataca
    26341 gataaagagc gactagctga tgccctagag ggaatgatta gctcagcgat tgcggttatc
    26401 cctgaagata gttcggtcga aatcaaagat gcagcgggca aatctgccag caccgatgcc
    26461 tttgaaaagt tcctcaattt ttgcaaggca gagatcaata tcgccctact tgggcaaaac
    26521 caaaccaccg agcaagaaag caaccgtgcc agtgcacaag taggcttgga agttatggaa
    26581 gatattcgct cggacgacca agcgatgatt gaagccacct tcaacacctt gttgcagtgg
    26641 attgtgaaat ataacttcaa tgtggaacaa ctgccgaagt ttgaatttta cgagcaagaa
    26701 gccatcaaca ccgaccaagt tgaacgagac agtaaactcc acgcaatggg cgtgcgtttt
    26761 tccaaagcct actttgagcg tgaatatggc tttgaggcgg gtgatattga ggtgcaagcg
    26821 gtcgaaaaag cggaaaaatc tgcaaatacc acagaattta gcgaaggaca acgccgaacc
    26881 caagtgccaa tgcctgtgcc aattttggaa cagctagaac acgagggaga agcaatggtg
    26941 gacgattggc tacaaggggt gagagataaa ctcgctcaag cagatagtct ggaggatttc
    27001 caaagtcagc tagatagcct tatccctgaa ttaagctttg ccgaatatgg cgagctgttg
    27061 gcgttaggct caacggtggc agagcttgca ggcagacaat cggtaaacga tgaaattaag
    27121 gcaaaacgca atgcgtaaat ttacctttaa acagcaagcc caatattttg agaaaaaact
    27181 caatctccgc acgaatagct accttgatat tctgggcgaa gagcacgact attttttcgt
    27241 ggtggctggg gcgaatcgta atgaagtgtt gagtgagttt cgcaaggcgg tggatgaggc
    27301 tattcacaac ggcgaaacct tagagaactt tcgcaagcgg tttgatgagg ttgtggcaaa
    27361 aacaggctgg gagtacaacg gcggacgaaa ttggcgaaca cggattattt acgataccaa
    27421 tgtttacggg gcgtataacc gtggacgttt gcaacaacat ttagagcttg cggaggatat
    27481 gccttattgg gaatatcaac acaacgacaa cgcccaccct cgcccacagc acgtggcgtg
    27541 ggacggcttg gtgctgcgtt atgacgatcc gttttggaaa tatcactatc caataaaagc
    27601 ctacggttgc cactgcaccg tgcaagcgtt agatgatttt gacctcaagc acgatggtaa
    27661 aaccgtcagc ccaccacctg aaattgagtt tgaacaaaaa acggtaggcg tgcggacagg
    27721 caattcacga gtcgtaactg tgccgaaagg ggttgatgtg ggttttacac cgcataattt
    27781 tgataatctc aaagccggga gagcagcaaa tgtagataag ttgctaatgc aaaaaatggt
    27841 taccgccgat cctatatttg cctccaaagc agtcagtgat ttattggcaa aagagccggt
    27901 tgcaaagtta cataaccaag cctttaaaaa ttgggtaaat gatgttgcca atgctaaagg
    27961 aagtgcatta tcccaagtag agaatatgca gttgttaggg gtactacctg ttgcggtgat
    28021 tgaacggtta cagcagatca atttagctcc gcaatctgca attattgcaa taacaaaagg
    28081 cgatatggta cacgctctac gagagctaaa acaaaatacc ggtattgccg taccgttgga
    28141 attttgggaa aagttgcctg caaagttaca atacccaaat gccatcttgt tggaaaaaca
    28201 acaagcagaa actacattgc tctttatcta tgacgtagct caaaccaaaa ttgccgtaaa
    28261 agtcaattat gatgcaactt tacaagatag acacggagca aaaggacggc agaaagtctt
    28321 actgaatcga gcggttacag gtagtttatt ccaagataca actggattga aaagttcaaa
    28381 gtatgaagtg ctattgggag aaatgtagcg gcgaaggact cgaaccttat aatgtaggtt
    28441 aaacctacaa cctttaccaa ttaggaaact accgctacat tgtgtaaatt cactataccc
    28501 ctaaattatt ttttaatcaa taggagaaac aaaatggcag aaaaacaact ttcctttaaa
    28561 gtagccgaaa tagtgccaat gtcagctatt aacactatgc ggcacttaat tagtttggca
    28621 ttacaagcga attatgagag agaaaaatct cgtgcttgat aatttcaatg gcttgtagtt
    28681 cgggaactat attatctgaa acaagccatt gttttgttga tgtcagacat ttagcgatga
    28741 aatccataat taaaccatta gcagtagctc gttgttccgg agtaagttgt aaccacgacg
    28801 cctctgtttg ttggtctaat gtataaagaa acataacggc ttctttttct gataatgggt
    28861 caagtggtaa tttttcagct tttgtgacta accattgacg ggaaagcaat aaatcataaa
    28921 ccagttctat tgcttgttct gcatttacca tcatattcta attccttaat atatcagggc
    28981 aacattaccc aatctatatt ttactgagat ttgcttaatg atcaaaatca ccctcaacaa
    29041 cacccaagcg gtcaaatcgt tacaacaaat tgcaaatcag ctggaacaac ctcgccgact
    29101 gtatggcatt ttaggggaaa ccctaaagaa aattcacact gcacgcttta aagcggaaca
    29161 agaccccgat ggcaacaatt ggaaaccgtt agccagtagc acgcttgctt taaaacgtaa
    29221 acgaggtaag tccactaaaa tcttacggca agacggctac cttgccgata aaacggctta
    29281 caatgttaca agtgataatg ttgagtttgg ctcgcaggaa gtgtatgcac ggttgcatca
    29341 attcggcggt aaagccggac gaggcaaaaa agtgactgta ccggctcgcc cgtggttagg
    29401 cgtaggcgat aaagatgagc agttactttt acgcaaagct gagtggcatt tagggcaaat
    29461 tatcggtcgt atgggaaaat aaccgcttaa aatcaaattt aacgcataaa aacgcctctg
    29521 tgcgttttta ttttttattc gcctgattat tcgactcaaa aaatttaaac gctgttaaac
    29581 gcatttaaac ggtatttaaa cggtattgcc gattgtgata aatcctcttt attaaaacac
    29641 cctcgaaaaa tctttaaacc agtttaaaag ctaatttctc tccaaatcct tattattgcc
    29701 ccatcacgga ggcaatatga cccaaattga aatttttaaa gccggtaagc gttatgacgc
    29761 caacggcacg ttaattgaca ttacccctga aatgttgcaa cagaccgttg ctgcctataa
    29821 ccccgaattt cacgaagctc cgctggtgat cggacacccg aaatccaaca accctgcgtg
    29881 ggggtgggta aaagcccttt cccttgaggg cgatgtacta aaagcagaag tagatcagct
    29941 agacgctgag ttttcagaaa tggtggcaag cggcaaattc aaaaaagtct cggctgcttt
    30001 ttacttacct gatagcccga ataacccaca taaaggcgtg ttatcgctac gccacgtggg
    30061 gtttttaggg gcaatgccac cggcggttaa aggcttaaag caggtggaat ttgcagaaga
    30121 tgatgatttt gtcgtctttt ctgaatgggg ggttgcaagt ctatttagtc gttttcgtga
    30181 ttggttggtg agtgagttcg ggcttgaaaa agccgataaa gctcttcccc cacacgaaat
    30241 tgattggctg aaagaagagg caatgcgaag ccaaattagc aaacaggtac acgccgaaca
    30301 ggcaacacct gaaccgattt ttaatgaacc cgcacaacca gaaggagaac ctgaaatgag
    30361 tgcagaagag aaggaagagc ttgaacgctt aaaagcggaa aacgagcagt tgaaagccga
    30421 aaaagcccaa gccgaagcag agaaaatgga agcagagctg gaagctgaaa aagctggtaa
    30481 tgcagagttt tgtgaaggtt tagtcaagca aggcaaactt gccccggtgg caaaagcggc
    30541 gtttgtgcag gctttaaata acctttcagt attaaaagcc ggtcgtgagc cggaatttaa
    30601 tgagggcgaa gatgtggttt cacagtttaa gtctgcaatg tcgcaatcac cacagattat
    30661 ccaatttgga gaatatgcca cagcagataa agccaaccca caagaagcgg aagcagtgga
    30721 atatgctgaa ggcacagatc cagtttcgat tgaagccgac caaaaagtgc gagcttatat
    30781 gaaagcccac aatgtaggct acgctgcggc atttaatgcg atttatcgct aatgtttaac
    30841 ccacaactga aaaggaatac taatgacaac tcataactta caaaaactgc gtgtacaaga
    30901 ccccgtttta accgagctgg cacaaggcta tcacaataac gagctggttg ccgagacctt
    30961 aatgccgact gtcgaaatcg aaaaggaagc aggcaaaatc ccaactttcg ggcgtttagc
    31021 tttccgattg ccttctaccg tgcgtaactt gcgtggttca tctaaccgtt tagatccaga
    31081 agatattggg gcgattgatg tggcgttaga agaacacgat gtggaatatg ccattgatta
    31141 tcgtgaagag aacgaagcca ttttttcttt acgtcaattt gccttaaata ccacccaaga
    31201 tgtgattgcg ttaggtcgtg aaaaagcggt tgcaaccctc gccttagatg aaagccgtta
    31261 tgaaacagac aataaagtca cgctgtccgg caccagtcaa ttcagccata aagatgctga
    31321 tgtgtttaag gtatttgata ccgctattcg tgccgtgaag cgggctatcg gtcgtaaacc
    31381 gaatgtgtgt gtgatttccg gtgatgtgtg ggcagcgtta aaagaacatc cggcagtggt
    31441 tgaaaagctc aaatacagtc aagtagcgat tgttacccct gaggtgtttg ccaaactgat
    31501 cggcattgag accgtaaaaa tcggtgaagc ggtgtatgaa gaaagcggtc agctcaaaga
    31561 tatttggagc aaagatattg tggtggcgta tgttgctcct cgttcgaccg gaggcaaagg
    31621 cacggtttac gagccgtctt atggttacac ggttcgccgt caaaaaggct tatttgttga
    31681 tacttataaa gagagtggcg gcaaaattga agtggtacgc acgaccgata ttcacaaacc
    31741 tcatttagtg ggtgcggcag caggctattt aattaaagct gccgtataag ccacatacca
    31801 tagggtgcgt ttactaacgc accattatct caaacacatt acatagagga aaaaacgatg
    31861 gctaaattta ttgttttaca taccccaatt ttacacgatg gcaaacgcta tgaggtgggg
    31921 gcagaaattg aactcaccgc tgaacaagct gagaacaatg cgatcaactt aaaagcggta
    31981 gaagctgttc caaaaccacc taaaaatgcc tcaaaacctg aagatgagcc aaaacccgaa
    32041 ggtgaaccta agcctgaaga tgcagtgacg gaagatgatg tgaagctggc tgaagcaaaa
    32101 attgcagaag cagagcaacc aaaagggaat aaaaaataat gtatgtgcag attgatgagc
    32161 tactcacggc gtttagtcgc aagattgtgg tgcagctcag taatgatgaa ccgacagcga
    32221 ccgagcctga tttaaagatg cttgaaacgg cagttaaagt ggcaaatgag cgaattgatg
    32281 cagcgttacg ctctcgctat accttgccgc tggctgatgt gcctacgctt attaatcagc
    32341 acgcattaac ccttgcccgt tattggcttt atgcccgccg tcctgaaacc aaaatgccgg
    32401 acaccgtgaa ggaaacctac caacaagcgg tgaaagagtt ggaacagatt gcaacaggca
    32461 aactgcattt aggcattgct gaaagcagtc aaattttaga agacgatgtt ttagccgata
    32521 acagtgaata tgaagttcgg gcgaacgctc gcattgatac cagtcgttat taaagattat
    32581 gtcagccaca caaccgattt tagaagatat ttgccaacac ttgcggcaag cattgcccga
    32641 gtgggaggtg gaactcttcc cgaatgaccc aagcacctat catctctcgc acattaacgg
    32701 tgcggtgttg attagctatt tggcaagcaa atttgagaaa cctcgcacta cacaagcggt
    32761 gctgcaggtt cgccacgttc agattgcttt aacggtgctg acccgtgatt tgcataatga
    32821 tgtcggggcg ttggatttgc tggataaatt gcggttattg gttgtggggt ttaagcctca
    32881 aaactgcggt gagtgttggt tgattgatga attttttaat ggctcaagcg aagaaaccgg
    32941 gctttggcaa tatcagttga ttttgcaaac cgaaactcag caggtgcaac accaagcggt
    33001 cgaaaatctg ccaaaatttg taaccgctca tcttcgccgt caagaccagc ctggttcgcc
    33061 cggacttaaa acttaaatcg tagggtgcgt ttgctaacgc accatcaaca tcacctgatt
    33121 ttacggtgcg ttggcaaacg caccctacaa ggagaatatt atgacgtttc accacggttc
    33181 tgaaaccgaa cgagtaaacg gtggctctgt gccggtatcg gtggttgata gtgccattat
    33241 cggcattgtc ggtactgccc caatcggcgc agttaatgaa ttgaccgtct gtttaaccaa
    33301 aaaagatttt gccaaattcg gcacgatttt aaaccaaggc ttcaccttac ctgatgcctt
    33361 tgatatttta gctcgttacg cagcgggtaa agtgtatgtg gtgaatgtgc ttgacccttc
    33421 ccgccaccgt actaccgtga ccgatgaagt cctcacactg gatcgcaata cgctgaccgc
    33481 tcaaacagcg aaaaccggca ttattgcggt gacgagagtg aaagacggtg caaacgtgct
    33541 gaatgctgat cggtattcgg tcgatctgca aaccggcgtg gtgacctttg tctctgcacc
    33601 gtctgccccg aaaattagct atatctatgc tgacccgagc aaagtgaccg aagaggacat
    33661 taaaggcggg gtggatagct taaccggtaa acgcaaaggt tttgaactat tgcgtgatgg
    33721 ttttaacctt tacggtgcgg atgccaaaat cttaatctgt ccggaatttg ataaaaccgc
    33781 aagctgtgcc gctgcccttg ccacccttgc cgaccaactg cacgctaagg cgtatattca
    33841 actgccgaaa gggacgagct tatcaaaagc tattcaagga cgtggcccgg cagggacgat
    33901 taacgcctcg gcaagcaatg agaacgtacg ccatttcttc ccgtatgcgt tggggtcaag
    33961 caatactctt gaaagccttg cgacccacgc cgccggtttg cgtatgttga ttgatgtgga
    34021 gaagggctac tggttcagca cttccaataa agagctgaaa ggggtgatcg ggttggaaat
    34081 tccgctgacg gctcgggtgg acgataagca aagcgaaact aatctgctca atgcggtagg
    34141 gattaccacc attttcaata gttttggcac aggcttccgc ttatggggca accgttcgtc
    34201 taacttcccg actgtgaccc atatcagcaa ctttgaagtc gcctctcgca caggcgatat
    34261 tattgatgaa agcattcgcc aagccgaatt gcagtttatt gatttaccga ttgatgatgc
    34321 gttgctggat agcttccttg aaaccatcga cactttcctg cgtacgcaga aatcgttggt
    34381 aggttattcg gtgagcttag actatgaata tgacttggtt gatgcattca gccgtgggca
    34441 agtcccgatt gtgtatgaat acactcctaa aattccgggt gaacgtatca gcaataaatc
    34501 tgtgatgacc cgtaaatact tggcaaactt ggtgtcgcaa cgataagggg aaataaatga
    34561 gtattgcaat taaccaaatt gtaaacggaa atgtttacat taacggcaac agccaaatgg
    34621 ggcgagtgaa tgaggtcaaa atccccgata ttgagtttga atttatcgaa cacaaaggcc
    34681 ttggaatgca cggtgtgatt aaattacctg ccggcacgaa tgcgattgaa gcagaaatca
    34741 cttgggacag tttttatccg gaagtgcgtg cggtaatgct taatccgtat aaatacactc
    34801 agttgcaaat ccgctctaac ctgcaagtgt ttaactcgca gggcttggca gccgaagagc
    34861 cgatggtcac cattatgaat gtgtctgccg gtaaaatcgg cggcacaggg cataaaaaca
    34921 aagaaaatgc cgaatttgcc gacacgttaa atgtacattc aattaaacag accgttgccg
    34981 gtcgtgagct gttatttatt gatgtgctgg cgaatatcta ccgtgtgaac ggggtggatg
    35041 tgttgcaaaa attccgcacc aatatcggtt agtaaaatct ttaaagccgt ttaaaatcaa
    35101 tttaaacacc gtttaagtaa actcctttgt gaagttaaac aacaaccact cacaaaggag
    35161 tttttttatg gctaacgcag ctcaacaagt attaaccaat cttcgtgtac aaaccactta
    35221 taaattgcaa taccctatcg ctttaccaga tggtagagtt attgaaacct tagatgtacg
    35281 tcgtccaaaa ggtaaagatt ttcgtttgct tgatgaaaaa gggtttgacc ctgaaaaaga
    35341 tggcgtaaaa attctacgct tctatattca acagctcacc acacttgtgc cggaagatat
    35401 tgatgaactc gatgctgccg atattaaggg cttaaataac ctattggaag atatgcttat
    35461 tgagggaaag tccgacaaat aagtgaacta gataccgttt atgctgatct cgcttggtgg
    35521 tttaagtttt caccaagcga gcttttagaa ttggatttag tggatattcc gaaatgggta
    35581 gaacagatga acaggcaaat aaaagccggt tatgggcaga ttttacggta gagccaaata
    35641 aagggttcgg tggctaaagt aagtaaaatg gcgacgcccc aagctagata cacaccaacc
    35701 cacgccaaga ttgtcaaaat caatccataa atgagtacaa aactaacgcc ctcgcttagg
    35761 ctttgtatag attgaatcgc atctaaccag tagaagatac tccaaccgac taatgctacc
    35821 gctaacaacc atttagcggt gcattctgtt cttgttacac aagcctcgaa accagcccac
    35881 tcagtaattc gattatttaa tttagtcagc atacaccacc tccttaaact ttccctattt
    35941 tacgctaagg atttaaccaa tggcaaataa tttagctatc ggaatggtaa ttggtgcaag
    36001 cctatcatca ggttttcacg gtgctttttc aggagcaaag aaaaagctag aacaattaga
    36061 acaggctgtc gctaaaaatc agcaaagcca ttctaaatta ggttctgagc ttactgcatt
    36121 gcgtagtaaa caagctactc tctatgcaga aatgagccga gccagtagta aaggtggtgc
    36181 tgggcttgct cttatgcaac aggaatataa aaaaattggc aaagaaattg ccaatattag
    36241 ccgagagcaa cgcaaatgga gtacagaatt agaaaaatct attgctaagc aaactaaatt
    36301 acgcaatgca atggaacgtc atacacaagc taaagaaaac cgagacgagc ttaaagggaa
    36361 aataattgga acggtagctt ctgcggcaat gggtgtcggc gtgatgaaaa cctatatgga
    36421 gcaagaagaa gctgcgaata atcttaaaat ttcaatgctg aaagcagatg gttctttcgg
    36481 gaaatttgaa gagattggca agattgctga cacattaggg acagatttac cgggaacaaa
    36541 aaaagatttc tacaagctcg caatggcatt aaagaaacaa ggtgtttctg atgatgtgct
    36601 gaccggaggg gcattaaaaa cttctgccga actgaatgtc ttgcttgata tggatcagga
    36661 aagtggtgga gagtttttag cgaagtttat ggaatctcac cggctcaatg aaaatgagtt
    36721 accacaagca gccgattatc tgcaacgagc aatgtttgcc ggcggtttaa gtaaagagca
    36781 gatgtatgaa tcgatgaaat actatgctcc aaaactgaac tcaatgaaac ttacaggggc
    36841 tgagaatacc gaaaaagtgc tggcgattga agcaatggca ggtcagcaag gcttagaggg
    36901 ttcaaccttt ggtacgggct taaatatgat gttaagccgt atgaataaag gaccggaaat
    36961 gctcaaggca gcagccaaag gaatgaaagc cgaagctcga gagatgatgg aggctgtcgg
    37021 agtagaattt aatttctggg ataaaaacgg ctcattcaaa ggcattgatg gaatgctggc
    37081 tgaaatgacg aaatttgaaa aaatccgcaa aaaattcggt gacaaaggtg taggtttagt
    37141 tgcagaagag ctgtttggca ttgaaggtgg gcgtcttgct gatattttgg ctatgaaagg
    37201 tcaaaaaggc ttagatgaaa tgctgagtaa aatgcgtgaa caagccagcc ttcaagatcg
    37261 cattaacctt aaaacaaata cattaggtgc tgccctagaa tctttaggag gagcgtggga
    37321 aacctttgtg ggggatattg gctctgtctt tgccgaagat ataaaagggt tttcaaaagg
    37381 cttgcaatct gcggtggaat ggcttgtgcc atttgtatca aaacataaag aggcgattaa
    37441 atttgtaggt ggtttggttg ctggacttgt tattttacga ggcgttttac aagctggttc
    37501 ttttgttatt caaacggtaa ctatggcaat gaacgccctc aaaattgcag caatgaccaa
    37561 tcctattgtc ttagtcattg gagcaatcgc agcgggtgct tacttgattt atagccattg
    37621 ggatagcatt gccccttggt ttgcaaatct ttggcaaaat gtgaccgctt acttcaatca
    37681 attttggact tgggtaaaag gtgtttggtc gggcgtgacg gactgggtgt cttctgtgtg
    37741 gaatggtgta gccacttttt tcgggcagtt atggactacg attactagct tatttagtgt
    37801 agcttggaca aatatccaaa caatatgggg aggagcaaca gcttggttct ctggtttatg
    37861 ggatgggatt aagtctgcgg cttttggtat gttcgacagt attagccaaa aagtcagctc
    37921 tgttgtagca agcattaaga gctttttagg ctttggcgat gatgtggata aaatgggggc
    37981 aaaaattggc aatgtagcta cccaagtcat cagcaaagaa cactcaggac aactcagcaa
    38041 aaccgcagat atggcagcca atacagggtt ctctagcggt ggtttcaccg ggcaaggcgg
    38101 taaatatacc cctgccggta ttgtgcataa gggcgaatat gtgatgacga aagaagcgac
    38161 ctctcgtttg ggtgttggaa tgctggatag cttaaactat ggcggtgcta tgggtttcac
    38221 tcaacctgtt ttgcaaccga ttttaggtaa gcaaaaaggc ttttttggct cactttggga
    38281 cgatgtgaaa ttcggggcaa actttgtcgg caatctgctt ggcttaaatc aaggcagcct
    38341 gaaaacgcct gattttaacc caaatgcgac caatgcaagc ggtcaaaatt cgtcgatttt
    38401 tagcaattat gaaccactca accgaaatgc ggtaacacag caggaaagct cgcaagcacc
    38461 gcagatagtc gtgaacttta acccgacaat caatgtaaac ggtaatgcta cgcaagaggc
    38521 tcaatcgcaa attatgcagc agttgcaaat gagtgcttat gagtttgaga aattgctcaa
    38581 tcgtgtgcta gaccaacgaa gccgtagagc ctattaggag tgatttatgt attttatgtt
    38641 aggcaatatt gcctttgagc cggtgaattt aactgaattt agcgagcaac ataccgccga
    38701 atttgccgaa cacgctgtgc taaaaggcaa acctcgttta caagcgatgg gcgaaaagct
    38761 aaatgaactt aatttttctc ttcggttgca ccataccata ggcggtgtag agagccgtta
    38821 tcaagccttg cttgaagcca aagcgaagca agcggcattg gcgttaattt ggggcagtcg
    38881 ttataaggga gattatgtaa ttgtcgatat ttcatcgacc acattgttca ccgatggcag
    38941 aggcaatgcc ctcgctcgtg aaatgcaaat cagcctgaaa gagtttgtgg gcgataatga
    39001 cggtggtgtg ttgggtgagg cgttaaattt tggtggtggc tcactgcttg gctctatttt
    39061 gccaagcggt gcggtaacta ccctatctca aatcaaaaca gcagtcagcc gaggtgtgga
    39121 gctttataac agcggcaaac gcttagttga cgaagtgcaa aataccgtgg cgattattcg
    39181 gcagttgaaa aatgacccgg caactgcatt ggcatattta cccgctgcat tagcgaattt
    39241 agacggggca ttggggcatt ttggtaattt gaccggctca tcggcgacct tgggcggttt
    39301 gcaggagaaa ctaccggcag cagtggtctt tagcgaggaa atcggcgaga tttatcagag
    39361 tttgcaaaca atgcgaagca gtttgggtaa tgcctcggca aatagctggg ataattggtt
    39421 tacaccggca gagagtgcat tgacagaggt cacagacagc tttgaccatc tagcaaaacc
    39481 ggtggcaaaa atgaccgctt ggattgtgct gcgtaccgat gaggaggcag aaaatgacac
    39541 agttgcttaa acatatcgtc aaacagggtg agcgttggga taacttgagc tatcaatact
    39601 acggcaatgc gtttgaatat ggtcgaatta ttgatgccaa tccgcatatc ggtttttgcg
    39661 aggtgttgcc gataggggta acaatttata tccctgtact taacgttaag ccaacgaata
    39721 atgaaaatat gccaccgtgg ctaagggggc gtgatgcgta atgtaccgaa gcccgatttt
    39781 tcactgtttt atgaaaaaac caatatcact gccgagattg agccacattt ggtgcaactg
    39841 acctatatcg accatttgga aggtcaatcg gacgaactca ctgtggaatt tgaagacatt
    39901 caaggcaaat ggatacgcca atggttcccg actcaggggg ataagctcaa agcggcgatt
    39961 ggctatcagg gcgaatttct gacggacatc ggtgagtttg aaattgatga agtggaatat
    40021 agttataagc cttccactat taacttaaaa gctctaagca ccggtatcag caaagccaac
    40081 cgtactttaa aaccgaaagc ctatgagaat acgactcttg ctcaggtggt ggcaaaggta
    40141 gcagataacc tgaaattaaa ggtagtcggt aagattaagg ctatcccgat taaacggatc
    40201 acccaatatc aagagcggga cgtggagttt ttggcacgcc ttgcccgaga gtatcatcac
    40261 agctttaaaa tcgtgggcaa tcagctggtc tttaccgata aaagcgaact ggggcaaagt
    40321 gagccggtgt taatgttgga agaacgggat actatttccc tacgtttgcg agatcggatt
    40381 aaagacactg caaaggcagt ggaaatcagc ggctatgata caagcggtaa aaaagtggtg
    40441 aaaaaacgca aaaaggcaaa agccttacgc ccgaatataa aacaagctaa atcagccagt
    40501 gaagatacgc tgaaaatcat cacacgaggc gaaagtcaag aacagattga tgcacggggt
    40561 gaggctgcgt tggctacgca aaatgaagat caggcggctg gtgatattga gcttatcggc
    40621 aatcctaaat tggttgccgg agcaacgatt ttattgcgta actttggcgt gtttagtggc
    40681 aagtatctga ttaaatcatc acgccatacg attagccgta gcggtggtta tactactcat
    40741 attgaggtca gaatgttgga gtttattgcc gatgatttaa tcacattagg tatggaggct
    40801 ggcaatgcaa acgcataatt ttggggcgac ttatcaagaa gggattgtat ccgctgttga
    40861 tccgaaaacg cacaaagtgc ggtgtaaaat ccctgcgctg gaagatttag aaactgcttg
    40921 gctgtcgttt ttgaccccga acgccggtgg caatcagttt tactgtttgc ccgatgtggg
    40981 cgagctggtg gcaatgctac ttgatgcaca aggcgaaggt ggctgtgtgt ttggggcaat
    41041 ttataacgag caagacccga caccggttgc cgatagcgat atgtgggtta agaaattcag
    41101 caatggcacg gagatttcgc ataatcgcaa aaccggcgat gtggtagtga agactaacgg
    41161 gcatttaacc gcaacggctc aaggtggggc tacgattaat gcaaacaccg tagtcaatgg
    41221 cacattgcac gctaccggta aaatcacctc tgacgaagaa gtctctgctc ctgttgtgaa
    41281 acaaggcacg gtagagcttg gcacacataa acacggcggt agccctgaac ctaataagta
    41341 attctttaaa ccagtttaaa atccctttta aagatagccc tgtatcatca gggctatgaa
    41401 cagacaaact tccattcaat taacccactg gcaacttgca ccctcaaccg atacagttga
    41461 ggtggtgcaa ggtattgatg atattcatct ttgtattgtc aatatccttt caacccaaaa
    41521 aggcacggat attttacgcc ctgaatttgg ctctgaccac tttcgctaca ttgactaccc
    41581 tgaagatgtg gctatcccga attttgtacg ggaaattaca accgccttgc aaaaatggga
    41641 aaaacgcatt gaggttgaag aagtattggt ggacggttca gctccgcatt ttatttttac
    41701 tgtgatgtgg cacttaaccg atgatgttta tcgtgaaatt taccgaacaa cggtataagg
    41761 ataggcaatg acagaagcga ttaaaatcat tgatgacgat gtaaaaaccg tacttgccga
    41821 agcgattgcc gattatgaaa aacgcaccgg taaaatctta caacctgcac atattgagcg
    41881 ttccattatt caaacctacg cttaccgtga gcagttatta cgcaaaggca ttaatcacgc
    41941 ctttttacaa acctttccgc agtttgcgac ggggattgcg ttggatttgt gcggggaaac
    42001 ttttggttgt tatcggctta gagataaacc tgcccgtact ttactacgct tttcagtaag
    42061 tggtgaacat acagctatag ttatccctaa aggaacgcag gtggcaatta atgacgagct
    42121 atacttttca acgctcaatg acgatgttat tactccatta attacctatg tggaaattga
    42181 tgcagagtgt aatcaggttg gtgttatcgg taatggttgg gaatcaggaa gagtcagtaa
    42241 actaaaaaca gcactggcaa ctaattataa agtaacagtt gaaaacattg atattacgag
    42301 cggtgggttg atgcaggaag aagatgaacc ttaccgtaag cgaattttag ccgcaccgga
    42361 agcctttagt aactgtggct ctatcgctgc atatgattac cacgtccgct ctgtatccca
    42421 agatattgca gatgtgaata tctctacgcc taggggtggc ttggtaagaa ttgcggtatt
    42481 gacccaaaaa gggttaccgg atacccgatt acttgatgat attaaaaaac acgttagtgc
    42541 cgaacggcta cgcccacttt gcgatatggt cgaggttatt aagcccacag aacgccgtta
    42601 tcaaattacg gcacgtttaa tattgttaga tggctaccgt gaggatttgg taaaagcaaa
    42661 agcccgagag gcattacaac tctatttgtc agacaagact aaaaaactcg gtttagacat
    42721 tgtgccgtcg gccatcattt cagctttaag agttgagggt gtttacgatg tgaatttaat
    42781 tcagccagtc aaaactatta tcaacgaaac agaatgggcg aactgcacag caatcagcgt
    42841 agaagtcgaa gaggagcgta gagatggcta gcttgcacta tgcggacatt attgtgcgag
    42901 accctaaata taaagcatta gcggatttaa gcaagcggtt aaatttgctc gatacttcgc
    42961 aaattatgac tacgctggtg gatttattgg gcgacgaatg tatcccattg ctggcagaaa
    43021 aatggtcggt aaccggctat gacggcttat tggttgcaga tagcgaaaac tcaaagcgag
    43081 ccttaattaa aagagcaatc gaactacatc aactaaaagg cacgccttgg tcaattcgtg
    43141 aagtattacg cagactaggt ttcggagagg ttgagattga cgagggactg aaaaatcggc
    43201 tgtatgaaag cacttatgtg agcggaatcc ccgaaaacga acgctgggcg cactatgcga
    43261 ttaggttgag taacccgatt accaatgagc aagctcgcaa tatccgtaag gtcttacgca
    43321 attttgctcc ggctcgttgc tctcttgcag ttttggatta taaagcagat ccaattcgat
    43381 ataacaataa agcaacctac aacggcacat ataaccacgg ttcaagttaa ggataaatta
    43441 tggcaggtgt acaagaaacc gcacagtggg aaaaccacgt ttacagaatt gaagaaaatg
    43501 acccagtcca cggaggagaa aacggtgtaa ccaataagcc aattaagcac ctagcaaacc
    43561 gcacgctcta tctgcgtaga ttgctcaccg aggcaggaca acgcattaac ccgaaaaaaa
    43621 tcacagctac cagcaaaaat agtaatgatt taactgggca tactcacgag attgaccacg
    43681 caagcctaac gcaaaaaggc attgtgcagt taaatgcgag tatccaatca actagcacaa
    43741 ctgagtctgc aaccccttca gcagttaaag cagcctatga taaagcagca acagcagaac
    43801 aaaaagcgac attggcaaat gagaaagtcg aggcgattaa agtaggcgga cgaaacctcc
    43861 tcattcaatc caacactcca cacaacggga atgcgtactc agtcagatac gcattggctg
    43921 aggctccgaa agtaggcgaa gagattgtag tcactctatg gggtgaactc ggctctcaac
    43981 gtactggaat tggcgtttac aactctcaag gtgctacgga gttggcaaaa ctggtcaaaa
    44041 ttcgtgatgg agtttatcaa ggtaaaggca tttggcgtaa gccgatgagt gagggacgag
    44101 agcgaacgcc taacgacacg cacctgaatg tgtattttta cccgaaaacc gcaacagata
    44161 ataaccgtat tgagcgaatc cagcttgagc gaggctcaat cggtacagat tggacgccaa
    44221 acgaggcaga cttaaaggca gagattagtg caatccgcac taaactaatc cctgtacggg
    44281 gtggcaatgt tgctacaacc ttaaatgcgg ctaagcggtc ggattggttt agagaaatgc
    44341 aaatccctta tcaaagtggt tgggggtatt acacccaagc atttcataac tcagggacgc
    44401 aacacaacta cagcaattta ccgctgacag gtcgttatta ttttatcgcc gaactctatc
    44461 ataactctgg ttattctcac ttgcgtatca cctatccaag tttaaaacgc acctttgaga
    44521 gtgctatcaa ccttaacaat gaggatttga ttctagattg gcgtgaggtg gtgtttttaa
    44581 aagatggatt gtatcaaggc acttttaaaa caacaggcac actagagtct gcttatcgtc
    44641 taagagcggc tcgtgatgat gaacgttatc agccatacct gcaaatggtc gatatgggct
    44701 atgaccttgc caatcccccg gtaggaaaaa acaaaattat tggcagtgtt gattattacg
    44761 ttaaaaacgg cacaagcgag tcttccaaag cgacgatgat ggcagcggca atgcctgaca
    44821 agaacgtatt ttgggaagta gcattgtgga atgcagcaca gcaacggaat gtattgttta
    44881 aggggtatag caagactaac aatttgagta ttggtaaaac caccgacaat gagcgagacc
    44941 gagtacaagt caatggcaca atccaagcca ccgcaccggc tgataacgcc aataacgacc
    45001 aagtgccgac tacggcttgg gtgcgtaaga tggcaaagat tttagctgat ggcaaggtga
    45061 gtaaagccgg tgacacaatg actgggcatt tattcatcaa gaatggggaa tactctgcgg
    45121 tacataccta taacacaagt ggttggttcg caaaatggga ggcggcccca ttatctgatt
    45181 cgcactttgc tgccattgta tatgccaacg acagagagac agttatcaat cgggtgttaa
    45241 ttcccaagaa gaatggcaca gtcgctttaa ttaatgatat tgccgatacc gttagagccg
    45301 ctgtgagtcg tagtgataaa tcccgtagta gaacttttcc tctgcaaacg gggaaaaaat
    45361 atacaaccac agggagcgtt acgatttatc cagatggccg aattgtgcag attttccact
    45421 taaaaaatat taaagcggcg tggtttgatt atgaggcaag tgcggtagga gataggcata
    45481 gagttgtcaa tatccctctt tggactgcga tgccaaataa aatttttgat gtcgatgtta
    45541 aaactgttcg cccctcaaat aatgcctcaa cttactacat agaagcggct gaatggctga
    45601 gtgcgtggca gatttacggt aatgacacga acaaatcaag tgtcaatatt aatctatctc
    45661 gattcagagg tggaaaggat gaagatatgg acttgtatgt aacagttgag ggatattaaa
    45721 tggcatattt tgtgaatgtg attgatgagc aaggcaatta tgagctaatt gatgatgagt
    45781 ttattgggct gtatccggat ttggatttta acacattacc caaactcacg gataagcaat
    45841 atcagaccta ccttgccaaa gcaaacggca aagagcgatt tgtaaatggc gaatttgtgt
    45901 atgagcaaat taaggtggat atgcaagcgg tcatttccgc tgaaaaatct gcaaagttag
    45961 cagagattaa ccaaaaagca caagccttta tcaatgattt agccaaatac aacgaaacgc
    46021 ctaagtttga gcgtgatact tggcttgagc aagcgaaaga ggcaaaagcg tgggtggctg
    46081 acccaaccgt acaaacgcca acccttgagt taattgcgca aatgcgaggc ataccgctcg
    46141 acacgctacg ccaaaaagcc tacgaaaaag cgatggcgta tcaaacggtg gctgctattg
    46201 tagcagggca acggcaagga tacgaagacc gcctagaaca agcggaaacc ttagagcaaa
    46261 tacaggcgat tgagccgatg tatcaattac cgcaaggagc aaacaatgag caaactgact
    46321 aaattaaaat cgtggagcta ccacgtctta attgcaatag atcaactctt taacgctctc
    46381 accggtggag cagcggacga aacattttct agccgttgct accgtggtgc agtgcttgcg
    46441 gaaaatccga aaaaacgttg gcgtttttgg cactcttttt tgaattgctt atttttagac
    46501 ccaaagcact gctacgccgc ttataaagcg gaggtacacc gcaagcagta tccgaaggca
    46561 tttagacttg gggggattta atgaaaaagc aaaacttaaa attagtgcgg ggcgatgatg
    46621 tgagttttag attcagcatt aaagacagca ccggacaacc tcttgcgtta aaggatttgt
    46681 ggtttgattt gcacttagtc agctatcaag gtgaggtgct gattgctctc tctactgatg
    46741 atggcagtat tgagacagca gaggctggtc agatggtgtt acattttagt caccagcaaa
    46801 ctgctcgagc tgaatggaca agtgccaatt atgacttgca actcacgcac gactatacaa
    46861 gagtctagga ggtggagatg acctctatca ttgaactaga cctgactgat gacctcatca
    46921 ttgaggtgca gttagatagc acaatcatta ccggcgatag ctttttagcc aacctgccgg
    46981 atttactcca aatttacaac caagcaaagt cagatagcag taaggagctt aacaatgact
    47041 aaacacaaaa accacgaaaa ccacccgatt gctataacat tctaccaact tggcaaagat
    47101 gtcggcgaca ttaaccgccg gctagcggtt attgagcaac gtgagcaatc agcacagcca
    47161 agccaaccac aagctgaggc ggttacaatg ccacagcaag atgctgttgc cattaataac
    47221 atcaatgccg ttttggaggc ggtcgaaaaa tacaaaactt ttgaaaaata caacactcag
    47281 tggcaagagc gttttgaaaa attcctgtct cgtaacccga atgattacga gttaagtgaa
    47341 gagcaacgcc aaaaacttta ccacacgatg tgccagcatt tgtggcaggt gaactttact
    47401 gaaatcaata gtaaacagta tgaattaccg atcccgcaac aattccaggg taagtttggc
    47461 tatattgtca aaacctcggg cggtagcaca gaaattagtt ttgagttgct atctgaaact
    47521 cacagcactt atctttatcc ggatagctat attcccgagg gcggtggcga tgtaatgctc
    47581 aagccggctt atatttattt agtgattccg gacttagtgg caatgcgtga gccggaggtg
    47641 gtgggggttt caccgctgaa actgaacatt ctgcagaaac acctgctgac acctcagaaa
    47701 ctacaggagc agaagccctt gaacacgaag gcaaactgat tgatggcgta tggcattttg
    47761 agcgagagcc ggtaaatcca ccgagagatc agaattatta tgtggcaggt aacctgttct
    47821 acaacggcat accggattga taaattgatg tttcagtaaa cctaattagg ggggaatccc
    47881 ccttttttat tattataagg aaagaaaatg aataaatctt tagtagcgtt agctgttgca
    47941 gcgatggcat cgaaagcaca aactaaacag caagcaagca agcaagcaag caagcaagca
    48001 agcaagcatt gtgagataga gaaagtattt aaacaagctc ctttaccctt ttcagggcaa
    48061 aaacggatgt ttttatccca tttcaaacag gtgttaaatg caaatattga agcagacggg
    48121 aaagattgga ctattataga tgtttttggt gggagtgggt tgcttgcaca taccgcaaag
    48181 cgtgagaaac cgttagcaag agtgatttat aatgattttg ataattacgc cgaacggcta
    48241 aaccatatca aagagacaaa tcaacttcgc caagaaatct accaaattgt tgatgaaatt
    48301 ataccaaaaa ataagagaat tagcaatgaa attaaagcta aaatcatcaa taaaatcaat
    48361 gattttgagg ggtttaaaga cctcaaatgc ttaagttctt ggttattgtt tagcggtgag
    48421 caagttgcaa ctttagatga gttatttaag cacgattttt ggcactgtgt gcggcaaagt
    48481 gactatcctg aagcaacggg ttatcttgat gatattgagg tggttagtga gtcctttcat
    48541 caattattgc cgagatttca cgacaaagag aaagtattat tgattcttga cccaccttat
    48601 ctttgcacaa gacaggaaag ctataagcag gaaaattact ttgatttaat tgatttctta
    48661 cggttgatag accttactaa accaccttat atcttcttta gctcaaccaa aagcgagttt
    48721 attcgcttta ttcactatat ggttcaaaac agaaaagaaa actggcaagc gtttgaggga
    48781 gcggaaagaa tagtggttaa tgcctcggca agttataacg gcaaatatga ggataatatg
    48841 gtgtataagt tctaaaaatt taaacgccct ttgatagtga tttaaagggc gttaaaaaac
    48901 cattaaaatt aagaaagtaa agctcctgtt ttctttcgta gttt
//
LOCUS       DANLTI010000004        42843 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.004, whole genome shotgun sequence.
ACCESSION   DANLTI010000004 DANLTI010000000
VERSION     DANLTI010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42843
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.004"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..663)
                     /locus_tag="PXB09_000176"
     CDS             complement(<1..663)
                     /locus_tag="PXB09_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232334.1"
                     /translation="MSKNTHSYLPLQKYHILPIYGISPELIKKSVKDCSRDREKISHC
                     TLLNACSKALGFSGGFAGFQEDYLSNLTQFMEKHGLLYLVDLTKQKYPVNDMCMTRSL
                     ALKKQDISERIFFSGKEIPKRIFTGFNFRYDMHLANGFRIGNSLKTPYSDIGICEDIN
                     EALKNPSIKIDCRDGTIRSMADVVIGRYLDKVLFYYFNLIGDQLVQPRLDKYEIQCYY
                     PQG"
     gene            1019..1315
                     /locus_tag="PXB09_000177"
     CDS             1019..1315
                     /locus_tag="PXB09_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5232335.1"
                     /translation="MTAITIPQFEEVTSKQFQSEFGRIVDIVKGKTPVAITQYGRPTM
                     VLFPYDQAVEARRLLAKQRLLEMLAERDKNPPAALAEITLEELDKMIDEERNAL"
     gene            1305..1721
                     /locus_tag="PXB09_000178"
     CDS             1305..1721
                     /locus_tag="PXB09_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HDL5232336.1"
                     /translation="MHSDYLVIDTNILISGLLFPKSNPNLAVKKALLGYTICVSQATF
                     DEFLEVSARPKFAKYFSIQEREEFIANLLDAVKFVEIKETITDCQDPKDNKFLEVAIS
                     AKAKYLVTGDKKDLLSMNPYRNVEIISVSEFLAETR"
     gene            1721..3379
                     /locus_tag="PXB09_000179"
     CDS             1721..3379
                     /locus_tag="PXB09_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HDL5232337.1"
                     /translation="MKRFLTLFLLLFSSFSLAETHQIGILAQRGEAYTRTHWQPWVDW
                     LNSQFPNERFELVPLGINEASRRAELDFLLTNQAQFFYLSNQNVRWLATLNSPFSANG
                     EQGAVGSSIWVRADSHYQQLSDLKNQTISAVDNDAFGGFLLGLYQFHQAGMRQNRDFS
                     VQFSGFPVENALALLAEKQVEAAIVPVCLLEELEKEGKFKRSDFRLILQNPQAQGCLA
                     STPLLPNWSLAAMENVPNELAVQLATRLLNSHNPDLPRWTLPFSSAQADHILRELYRH
                     PQQKSLWATVLDWVRLNKFGLLAVVLFILLNLVALRYQVYRKSKALQQAHCKMQQYQQ
                     ELTRADRLALLGEMTTGFAHELKQPLSAVRMYAEGLKSQNSDPYQQRILDKLIAQVDR
                     AVKTMQSIRDWAQNRPSGEPQAVILNQLITNVIEFVAVENRQNAQISLIADRTFRLNL
                     HATVLEQVLTNCLLNALQAGASEISVRLQAVENGLEIAIEDNGGGFSPAQLEFPFVPF
                     RTDKPHGLGLGLVLCQRLMQSLNGRIVLANGENGAKVVLLLPQI"
     gene            3465..4112
                     /locus_tag="PXB09_000180"
     CDS             3465..4112
                     /locus_tag="PXB09_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDL5232338.1"
                     /translation="MIIHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHR
                     QGVLLLDIRMPLPDGQQVHQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKP
                     ASFEQLKQAIAQAEKVSEKAVKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLA
                     ISVRTVEVHRANVMEKMQAESLAGLVQMIGELQYKGSGNCSATFSFDFCRINLLL"
     gene            complement(4096..5034)
                     /gene="ttcA"
                     /locus_tag="PXB09_000181"
     CDS             complement(4096..5034)
                     /gene="ttcA"
                     /locus_tag="PXB09_000181"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDL5232339.1"
                     /translation="MTDDIQKSDKKITYNFNKLQKRLRRNVGNAIADFGMIEEGDRVM
                     VCLSGGKDSYTLLDILLNLQQSAPVNFSVVAVNLDQKQPGFPEEVLPRYLESIGVEYK
                     IVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLATLF
                     LNMFYGGKMKSMPPKLISDDGKQIVIRPLAYCKEKDIIKYAEAKQFPIIPCNLCGSQP
                     NLQRQVVKEMLNTWDRQYPGRLETMFSALQDIVPSHLCDPKLFDFKGIKHGQTIEGIE
                     GDTAFDDVKIEAKTFLYEDDDNNFAEAGMIQFKEVN"
     gene            complement(5097..5810)
                     /gene="ubiG"
                     /locus_tag="PXB09_000182"
     CDS             complement(5097..5810)
                     /gene="ubiG"
                     /locus_tag="PXB09_000182"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDL5232340.1"
                     /translation="MQNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILEKS
                     NGLFGKKVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQT
                     TIENFLAKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTF
                     KAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEK
                     FWLNNDVSCNYIATLKPNN"
     gene            5875..6255
                     /locus_tag="PXB09_000183"
     CDS             5875..6255
                     /locus_tag="PXB09_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HDL5232341.1"
                     /translation="MTRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFSLKGQPED
                     YKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFKVQYFWAEHLPQDPSLWLDYQPTE
                     TALTVNRERIALRMPANPRFSERK"
     gene            6352..9048
                     /gene="gyrA"
                     /locus_tag="PXB09_000184"
     CDS             6352..9048
                     /gene="gyrA"
                     /locus_tag="PXB09_000184"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDL5232342.1"
                     /translation="MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLFSMDQNSNTYNKPHVKSARVVGDVIGKYHPHGDFAVYNTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDAPAAMRYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLP
                     TKIPALLVNGSSGIAVGMATNIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFP
                     TGAIINGRKGIEEAYRTGRGKVYVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKI
                     AELVKEKKIEGISKIDDYSDKKGISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMV
                     ALDNGQPKVLNLRQIIEAFVKHRREVVTRRTIFELRKARERAHILEGLAIALANIDPV
                     IELIRASKTAEEAREGLLARPWALGNVAPMLEAAGVGASRPEDLPEHLGVRDGEYYLS
                     EAQARAILELRLHRLTGLEHEKIVEEYKELLTEIGELIHILTSPERLMEVIREELERV
                     KTDFNDERRTEITAASGDINIEDLIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGK
                     SATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQLKVYQLPQASRGARGTPIVNILPL
                     VKEENERITAILPIPNGEFSADKFIFMATASGVVKKVSLDAFSNVRASGLIALKLREG
                     DELIGVDITDGNSEIMLFSAQGRVVRFAETAVRAMGRTATGVRGIKLSTTEISSEEIE
                     EAEIIETDNEEAEDSSSVSLDKDRVVSLVIPRTEGDILTVTQNGYGKRTVISEYPVKS
                     RATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRTRVAEVSLVGRNTQGVR
                     IIRTAEDEQVVSLERVCEPEDDENESLDALENAETAETSTEE"
     gene            9143..11107
                     /locus_tag="PXB09_000185"
     CDS             9143..11107
                     /locus_tag="PXB09_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232343.1"
                     /translation="MALINLSNAYLGFGDHPLLDHTELHIEPGERVCLVGRNGAGKST
                     LMKILAGEVQLDDGKLVFEKDIVVTRLEQDPPRHIEETVFDYVAEGIAHLADLLKQYH
                     HISLQMQTDYSDELLAKLSAVQSQLEHANGWQFENRIQDTLKLLELAPDKRLCELSGG
                     WVRRAALARALVADPDVLLLDEPTNHLDIEAIAWLENLLLDFKGSIIFISHDRAFIRK
                     MATRIVDLDRGKLVSYPSNYDKYLEEKAEDLRVEALQNELFDKKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKALREERRNRREVQGTAKIQIDNTARSGKIVFEVENAGYEIGGRTL
                     LKNFSTTILRGDKIALIGANGIGKTTLIKLLLGEIQPTSGSVRCGTKLEVAYFDQYRV
                     DLDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNCLL
                     LAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFVDNTVTECY
                     FFEGEGVVNKYVGGYFDAKQQQENYFAATADKRLNSSKNLQKIEEKAPLAEQEKQKAD
                     QEKTKAEPTKKTKLSYKEQRELDELPAKMEQLEADIEALQAEVNSAEFFAKDPSYTNA
                     QLQKLADTEAALEQAFERWEALENIKNGNI"
     gene            11189..11947
                     /gene="tcdA"
                     /locus_tag="PXB09_000186"
     CDS             11189..11947
                     /gene="tcdA"
                     /locus_tag="PXB09_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDL5232344.1"
                     /translation="MTERLDNYEQRFGGIGRLYTPEGLEKLRRSHICVIGIGGVGSWA
                     VEALARSGIGKITMIDMDDICVTNINRQIHAMSGTVAQLKTEAMKERIERINPECVVE
                     IIDDFLTQDNLADYLNRGYDYVIDAIDSLRVKAAMIAFCKRNKIKIITTGGAGGQTDP
                     TKIQITDLSKTVQDPLAARVRSLLRKEYGFSNKNKFGVECVSSTQQLIFPQMGEACEV
                     SATMNCANGFGAVTMVTATFGFFAVSRVIDKLLK"
     gene            11994..13361
                     /locus_tag="PXB09_000187"
     CDS             11994..13361
                     /locus_tag="PXB09_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDL5232345.1"
                     /translation="MAIHRVNPKGSMEQLSHLEMELLAKNTQGNLHQLYRNCSLAVLN
                     SGVHTDDSRALLSQYPDFEIRLLTREKGVSLELHNPPETAFVDGKMILNIQYHLFAVL
                     RDIVFVNALKNAIRPLEETSLEALTTNTVFSILRNAKAIEMNTDPNLVVCWGGHSINE
                     TEYQYCRAVGQEFGLRELNIVTGCGAGVMEAPMKGAAIGHANQRYKNGRFIGITEPSI
                     IASEPPNPIVNELVIMPDIEKRLEAFVRLGHAIVVFPGGPGTLEELLYIIGIKLNPAN
                     HAQQLPLILTAPKESADYFYAIDQFIGETLGEEARSLYEIIIDDSVLVARKVKQAMIE
                     VKSSRYESGDAYNFNWSLKIEEDFITPFIPTHENMANLNLSLAQPKEQLAANLRRAFS
                     GIVAGNIKPETSDLIEKYGVFKLHGDRKLMEHIDKLLERFVVQHRMKIPTGEAYQPCY
                     EIVKG"
     gene            13381..14928
                     /locus_tag="PXB09_000188"
     CDS             13381..14928
                     /locus_tag="PXB09_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDL5232346.1"
                     /translation="MYLKHIEISGFRGINHLSLQLRPNMVLIGENAWGKSSLIDALSL
                     IFNLEQALYQFQFKDFHIQYTDTPNQVRDIQLVFTFCEEHQHDLAVQFPAYLAQAAFY
                     IDNHRCVSLAVTGKLHGEQISTDYQFVDQSLKPIQIEQAENAIRQFIYHHPVYRLRDA
                     RLNNRVHNELLLKGSSQLEDDFQRELNALSSLLKYYFLTSQSRYLIKTSMQDTALWWE
                     KVKSLCLRLKQQPELVESAQQHISTLFLFNPRSTVIEKPIILFEDLNAQLHPRMIAIF
                     WELLGFLPSQRITTTNSIELLSQVPLREICRLVRHHDHTQAYWLERHSLGKEDLRKLT
                     FHIHHNRGLALFAKAWILVEGETEVWILQELARLLDIHLEMEGIKIVEFAQCGLRPLI
                     KYARAMGIEWYVLTDGDDSGKRYADTVKSMEEDFAHRLTMLPQKDIEHFFYKAGLRNV
                     FIQLANWRSQEKYPVSYIIKRAIQRSSKPDLAIALANEMGQRGEHSIPTLFKQLFADV
                     LALINKV"
     gene            15151..16185
                     /gene="metN"
                     /locus_tag="PXB09_000189"
     CDS             15151..16185
                     /gene="metN"
                     /locus_tag="PXB09_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDL5232347.1"
                     /translation="MIQLKNISKQFEVKGKKITALDNVNLEVPRGTIYGVIGASGAGK
                     STLIRCVNLLERPTIGQVIVDGQDLTAMSDKELIHARRNIAMIFQHFNLLSSQTVFEN
                     VALSLRLSNTPKEQVEKKVNELLDLVGLTDRKDVYPANLSGGQKQRVAIARALASDPH
                     VLLCDEATSALDPATTQSILQLLKDINKRLGLTILLITHEMEVVKRICDRVAVIDKGQ
                     LIESGSVSEIFSNPKTELAQKFIQSTFHFELPQEYTEQLSSSPTEHSKPIIKFEFTGR
                     SVDAPLLSMASKKFGIDFSILMSQIDYAGGVKFGFVIAEVSGNPDSIAEAKFYLIDNN
                     VKVEVLGYVG"
     gene            16175..16852
                     /locus_tag="PXB09_000190"
     CDS             16175..16852
                     /locus_tag="PXB09_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232348.1"
                     /translation="MWADFMQEMTPQMWSLVWESTFETVYMGFVATALAVVIGLPIGF
                     LAFLTGKGEILENPRLHQVLDVVINIGRSIPFIILLIILLPFTRLVVGTTLGTTAAIV
                     PLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATNWQVVTKFYLPESLPILINGITL
                     TLVALIGYSAMAGAVGGGGLGNLAISYGEHRNMVYVKWIATIIIVAIVMISQKLGDHL
                     AKRYDHR"
     gene            16875..17708
                     /locus_tag="PXB09_000191"
     CDS             16875..17708
                     /locus_tag="PXB09_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5232349.1"
                     /translation="MSFKKILGVALVSALALTACKEEKKAESTAAPAAQAPAKIKVGV
                     MSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLDANAFQHKPYLDKD
                     SQSKGLNNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNLARALILLEKQ
                     GLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDDVDLAVVNNTYAGQVGLN
                     TQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKHFKDGVVKG
                     W"
     gene            17791..18621
                     /locus_tag="PXB09_000192"
     CDS             17791..18621
                     /locus_tag="PXB09_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5232350.1"
                     /translation="MNFKKLLGVALVSALALTACKDEKAQAPATTAKTENKAPLKVGV
                     MTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLDANAFQTVPYLEQE
                     VKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNTARALLLLQAHG
                     LLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDDVELAVINNTYAGQAGLSP
                     DKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKLFNGGVVKGW
                     "
     gene            18673..19464
                     /gene="metQ"
                     /locus_tag="PXB09_000193"
     CDS             18673..19464
                     /gene="metQ"
                     /locus_tag="PXB09_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDL5232351.1"
                     /translation="MKIMKLAGAVAIFSLFLTACNDKAEKLKVGVISGPEHKVMEVAA
                     KIAKEKYNRDVELVVFTDYATPNAALDKGDLDLNAFQHKPYLDNQIQEKGYKLVPVGN
                     TFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNLARALILLEKQDLIKLRADAGLKAT
                     SVDIIENPRKLVIQEIEAPLLPRTLDDVAFSIINTTYAGQNGLTPTKDGIFVEDKDSP
                     YVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEEFKGAMIKGW"
     gene            complement(19509..20660)
                     /gene="metK"
                     /locus_tag="PXB09_000194"
     CDS             complement(19509..20660)
                     /gene="metK"
                     /locus_tag="PXB09_000194"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDL5232352.1"
                     /translation="MAINLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACET
                     YVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPD
                     INQGVDRADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQSKVRKSGKLDW
                     LRPDAKSQLTFAYENNKIIGIDAVVLSTQHAEHISQKELIEGVMEEIIKPVLPSEWLS
                     QNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNEILVKLIYQNF
                     DLRPYGLIKMLDLIKPIYRETAAYGHFGRKHFPWEKTDKAEALRAGAGL"
     gene            complement(20843..21685)
                     /locus_tag="PXB09_000195"
     CDS             complement(20843..21685)
                     /locus_tag="PXB09_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDL5232353.1"
                     /translation="MKVGLVLEGGGLRGIFTAGVLDVFLDEHIHIDGAIGVSAGALFG
                     VNLPSKQKGRALRYNKKYAKDKRYMGLHSLLTTGNIVNRDFAYYELPSKLDPFDQQAF
                     EDSGMDFWVTVTNVETGEPEYIKIDNVFEQMEAFRATSSMPIVSKIVEIEGKKYLDGG
                     VSDSIPVQKFIEMGYDKIIVVLTRPLEYRKKPSSMWLFKRFYKKYPKLVQRWENRYAE
                     YNQAVEQIIQLNEKQQIFVIRPSRTVKISRLETDVNKIQAMYDLGVEDAKNALAGLRA
                     YLAK"
     gene            21745..22062
                     /locus_tag="PXB09_000196"
     CDS             21745..22062
                     /locus_tag="PXB09_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5232354.1"
                     /translation="MADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKD
                     YRIFVKANPQTLPLFLAENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGL
                     QAV"
     gene            22153..22866
                     /locus_tag="PXB09_000197"
     CDS             22153..22866
                     /locus_tag="PXB09_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDL5232355.1"
                     /translation="MNQKKLVSLIVVIVLAIISQIFSFFDKKEPSKAQEKSTQSSQSH
                     QVSTSSLGNYDVQMKNDRLKQHIVDTDYYTLALSWSPAFCQKQKRNNHGKIPSHLEYQ
                     CGGSADFGWVIHGLWPQSGKARSVDEHPRYCQGDLPMVAEQTIKQYLPESPGATLLQG
                     EWEKHGACAFNQADDYFAKQKELFNQLKLPDTEMSKLALFNWMRANNPHLQNVYLGGS
                     KDELYICYDKAFQPMDCPR"
     gene            22866..23360
                     /locus_tag="PXB09_000198"
     CDS             22866..23360
                     /locus_tag="PXB09_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDL5232356.1"
                     /translation="MADLRQLKMQVQRQLKRDLERANHYFNTTFTPPSISYAVRGVKA
                     GVAYLERNEVRFNPVLLQENEQAFIRQVVPHELAHILVYQHFGRVQSHGKEWKMMMET
                     VLGVPAEIYHCFDTQSVQQQFSYQCACQTHQLSIRRHNAVMRDKKSYICRLCKTQLHF
                     VEKS"
     gene            23465..24745
                     /locus_tag="PXB09_000199"
     CDS             23465..24745
                     /locus_tag="PXB09_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5232357.1"
                     /translation="METIVIVGGGAGGLELATYLGNKLGRKQKAKVVLIDRNATHLWK
                     PLLHEVATGTIDEGTDALSYRAHAKNHSFEFQQGTLVAVDREKKTVSLAPIYNDQNQL
                     LVKERHISYDKLVIAIGSKSNDFGTKGVAENCIFLDGSEQAKDFQKRMMELFLRFSHS
                     ENKDVKIAIVGGGATGIELSAELYHVVKNLNSYGFGKLNRASLKVTLIEAGPRLIPAL
                     PEKVSVSAFHELKKAGVSVRLGTMITEARPDGLMTRLGEKIEADIMVWAAGVKAPEIT
                     REFGFETNRLNQIEIKDTLQTTVDESVFVIGDCASLIQDGKPIPPRAQAAHQMATRCG
                     KNIVALIEGKEMKPFRFNDKGSLLSFSKFGTVGNLMGNLVSGDMFIEGKIARLAYLSL
                     YRMHQVALHGCVKTGLIVLVGQINRFLRPTMKLH"
     gene            complement(24832..25869)
                     /locus_tag="PXB09_000200"
     CDS             complement(24832..25869)
                     /locus_tag="PXB09_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5232358.1"
                     /translation="MNVLKLISLKSILIASGIFLSAQAAQAEGRLTVYCSVQNNVCEE
                     MTKQFSHKYNVETKFIHGGTGTIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEA
                     YRSPKQAEILPQFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSD
                     PRLKGEVQLPDPRSSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKSTLVTSNL
                     ARGESAVTVGFVHSYATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMD
                     WVLSKEAQEIPWKKHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLI
                     DKWLAEIKLAN"
     gene            26091..26789
                     /locus_tag="PXB09_000201"
     CDS             26091..26789
                     /locus_tag="PXB09_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDL5232359.1"
                     /translation="MENSWKYAFKLITPIFMGYFAAGVAYGMLATNAGMPAWFTIVMS
                     FTVVSGTAQYAAIPFFVSGVGAVSVFLSTLLMSLRFSFYTLNMMEHKPISKAKSLVAI
                     AGLTDEGFAVLSSLPKEQKQALFFKIAVLCVAYWTFSTIVGVLLGDSVANYIPHLDFA
                     LPCLFAILAYEQYKNQKQWKPIVIALIGFLLARQITETSVLLVAILVAIVIVALLPQS
                     SSIKLEKGVENEHK"
     gene            26800..27102
                     /locus_tag="PXB09_000202"
     CDS             26800..27102
                     /locus_tag="PXB09_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDL5232360.1"
                     /translation="MFAALVLGSQICRFLPEFLPKKVLSSPILQKLNKMLPLVIMLLL
                     LLTSLNFPKNGEGFNLILAQILALIGVLGSYVWLKNTFLSVALGIFGVNVFLSLLG"
     gene            complement(27223..28524)
                     /locus_tag="PXB09_000203"
     CDS             complement(27223..28524)
                     /locus_tag="PXB09_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5232361.1"
                     /translation="MSLFKFEERGSNARQEIIAGLTTFLAMVYSVIVVPGMLSQAGFP
                     AESVFIATCLVSGLGSILIGLWANAPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAI
                     FLMGVVFTLISATGIRTWILRNLPSSIAHGAGIGIGLFLLIIAATNVKLVVNSGMDIP
                     VKLGDFTSFPVLVSLIGLAAIIGLEKLKVKGSILWVIIAITIVGLIFDPNVKYTGFFK
                     MPSFGENSQFLNLDIMGALNTAILPVVFALVMTAIFDATGTIRAVAGQAGLLDKDGQI
                     INGDKALTSDSFGSILSGLFGTAPAAVYIESAAGTAVGGKTGLTAVVVGIGFLFMLFF
                     QPLAFLVPSYATAPALMYVGLLMLSNVSKLDFSDFVGAMSGLVCAVFIVLTANIVTGI
                     MLGFATLVIGRLISGEANKLNLGTVIIAIILVAFYAFDLAI"
     gene            complement(28657..29631)
                     /gene="secF"
                     /locus_tag="PXB09_000204"
     CDS             complement(28657..29631)
                     /gene="secF"
                     /locus_tag="PXB09_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDL5232362.1"
                     /translation="MAIENVQQDVAEIKLPYKLIPFMKYRYVGFIFSLIVTALCIFTI
                     ATKGFNWGLDFTGGTVIETQFSQPADLAKLRTELENSGYGNALVQTTGSQKDLMIRLA
                     ASAGDMSVGNKVMEMIHQKLDPNATIKSIEFVGPNVGEELTQGAIYATLATLAMLLIY
                     VGTRFEWRLAVGGIVALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVF
                     DRVRENFSKVRRSSSIEIIDISLSQTLSRTLMTSVTTLFVVLALFYLGGPTLHSFSLA
                     LLIGIGFGTYSSIYIAIGVALQLGLKREHMVQPKVEKEGADQDAFIDY"
     gene            complement(29641..31482)
                     /gene="secD"
                     /locus_tag="PXB09_000205"
     CDS             complement(29641..31482)
                     /gene="secD"
                     /locus_tag="PXB09_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDL5232363.1"
                     /translation="MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQ
                     ATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKISEALGNNYSVA
                     LNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK
                     EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQAL
                     SESRTMAIEQNLSILRKRVEELGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATA
                     TLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSGTDE
                     RGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVI
                     NVATIQTRLGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVK
                     QGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIGLMSLIGATLTMPGIAGI
                     VLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLY
                     GVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI"
     gene            complement(31522..31815)
                     /gene="yajC"
                     /locus_tag="PXB09_000206"
     CDS             complement(31522..31815)
                     /gene="yajC"
                     /locus_tag="PXB09_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5232364.1"
                     /translation="MQQGGGMEMIFILIIFGAIFYFMIYRPQAKRQKQQRDLLASLTK
                     GDEVLTSGGLIGKITKVTADNDNIVIALNDTTEVTIKRDFVVAVLPKGSLKSL"
     gene            32016..32573
                     /locus_tag="PXB09_000207"
     CDS             32016..32573
                     /locus_tag="PXB09_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDL5232365.1"
                     /translation="MKKLFAQAVIFGAFFASSAFAHNVQLNQALPAVSVAKDGELAVA
                     GGKVSYKNWHSSSLAGKVRVIHHFAGRSSVKEKNEDLMTAIKNAGFDRSKYQTVTIVN
                     ADDAIVGTGVFVKNSVENGKLDNPHSQVVLDQQGSVKKAWGLKEKESFIAVLDKSGKV
                     QFTSEGKLSAKQIQEVIGLVKTLTQ"
     gene            complement(32614..33582)
                     /locus_tag="PXB09_000208"
     CDS             complement(32614..33582)
                     /locus_tag="PXB09_000208"
                     /EC_number="5.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDL5232366.1"
                     /translation="MKLFTLENAFLRITLSDVGASWLSCIVKMPNEEREVLVTTSAKN
                     WQKQTAFFGATIGRYANRIANAEYRLNGKTYQLAKNNGEHNLHGGELGADKIVWQLES
                     QSEQAVKFSYFFADGEEGFGGEVKAFVEYRLTENELQISFDAVANQDTPLCLTNHAYF
                     NLQGSETILDHELIINADGYLPVDASGIPNAPLKKVESTSFDFRNAKKIGQDLLADDD
                     QKAVKGYDHSFHLAKNSENPTACLAVEDLKMELRTSMPALQLYTGNWLKGQPNLTKGE
                     YEDYAGVALEPEFFPNSLNQPELLQFGGITKAGEEYHHTISYRFII"
     gene            complement(33708..34871)
                     /gene="galK"
                     /locus_tag="PXB09_000209"
     CDS             complement(33708..34871)
                     /gene="galK"
                     /locus_tag="PXB09_000209"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDL5232367.1"
                     /translation="MKPQEIALQQFEQHFGYKAERTVFAPGRVNIIGEHTDYNDGFVM
                     PCAINYGTAVSFAKRSDNKWRVFAIDLNQQDEFDLSQAIEPSEQKWANYVRGVVKFIQ
                     AKHPEFKQGADLAITSDVPMSSGLSSSAALEVSIGKTAQLLGDLPLSLPQIALIGQEA
                     ENKFVGCNCGNMDQLTSALGQQDHLVMIDCRSLEITPTPVPQGYSIAIINSNVKHDLV
                     TGEYNSRREQCEFAAHFFGKAKLRDVTAEQFIERASELSEENELAYKRAKHIISENQR
                     VLEAVEALKANDMVKLGELMAQSHDSMRDDFEITCPEVDCLAEIAQQAIGKNGGARMT
                     GGGFGGCVVCLVPNDKVEDLRQAVANNYEKQTGIKETFHVCTASDGVRECPAR"
     gene            complement(34881..35927)
                     /gene="galT"
                     /locus_tag="PXB09_000210"
     CDS             complement(34881..35927)
                     /gene="galT"
                     /locus_tag="PXB09_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDL5232368.1"
                     /translation="MSEFVLNDHPHRRFNPLKNQWILVSPHRAKRPWQGQQEEIVQDE
                     KPSYDPSCYLCPGNKRITGEQNPNYTKPFVFKNDFSALLPDTPAPIPNDDPLFQISHT
                     QGESRVICFSPDHSKTLPQLSIEEITDVVTVWQEQANELKEHYQWVQIFENKGSMMGC
                     SNPHPHGQIWASNFLPNEIAIEDECQAKYFAQYGSPLLLDYAQRELDKQERIVAETED
                     WIAVVPYWAAWPFETLLLPKAKQFKSITDLNEAEKADLALALKKLTTRYDNLFNISFP
                     YSMGFHFAPFNGKENAHWQLHAHFYPPLLRSATVRKFMVGYEMMAESQRDLTPEQAAE
                     RLNAVSDTKHYKDK"
     gene            36140..36991
                     /locus_tag="PXB09_000211"
     CDS             36140..36991
                     /locus_tag="PXB09_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HDL5232369.1"
                     /translation="MERLNKFDAWLMNHKPNARLSGASRLLTEFWFFGLKEARACLFA
                     GLFFIAMFSVPKTGLWGLPRYDILLIFAIVVQIAMVKLGLETWDELKAISLFHLVGFV
                     LEVFKTSSNIQSWAYPDFAYTKLFNVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHLPY
                     WLATLTALMIYLNFFTHHYIGDYRWYIAAFALGLYARTFVFFTPYDITRKMPLLLSFF
                     LIGFFIWLAENIGTFAGIWRYPNQFGAWSMVHMSKWSAWALLVMMTFTIIVHLKHIKQ
                     TVRVSSD"
     gene            complement(37077..38162)
                     /locus_tag="PXB09_000212"
     CDS             complement(37077..38162)
                     /locus_tag="PXB09_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5232370.1"
                     /translation="MEYRYYITTALVIAVLQLFLFNFAKTVSWLFNLSSKNRKTVGIL
                     TFLVANGLVILHLTRTFALFRIMAFILVLLLFAFFISFFTACIYKIFNGNTTVNRWLK
                     IAYPFAFFGLLGLGYYNAYTPTVVHYSVKLDKPLEKPLRIGMASDLHLGKLFGTKQLD
                     QLAEIFNQQKVDLILLPGDIMDDNTEVYVADKMQPHLAKLKAPLGVYATLGNHDFFGA
                     QETIAKEITDAGITVLWDQTAEINGKFTLIGRNDDLVKNRPSAEQLLQNVNTKLPVIL
                     LDHRPTEIEQHAKLPIDIQVSGHAHKGQVFPASIITKLIYRLHYGYEKIGFGHYFVTS
                     GYGFWGVPMRLGSQSEVMIIDVEGENP"
     gene            complement(38184..39164)
                     /locus_tag="PXB09_000213"
     CDS             complement(38184..39164)
                     /locus_tag="PXB09_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5232371.1"
                     /translation="MLFDSIQFSIGVTLPTILLMLFGIFPRRRKFIDDTFCNMASKVV
                     FNFTLPPMIFLNMLKSPLDFSSQINLISTGVGGSILIYLWAEWWAARHIENRRYRCIF
                     TQGTFRTNAAILGIALILNAYGDKALAAASVYISCLVITFNVLAVITLTSSLSEKKVN
                     FGRLILSILRNPLILAVIAGLTFNYFELSHQIPTPLESAGKLMASLTLPLALICTGAS
                     INFKQLKQFNQGVESTINKIVLFSASIRLIFAPIFLLLLGKFVFQLPPMELGIVFVAA
                     SAPVASATYAMTRNYGGDGEAAANLIGITTLGSMFSASIGLFLLRQIGWV"
     gene            complement(39267..40365)
                     /gene="prfB"
                     /locus_tag="PXB09_000214"
     CDS             complement(join(39267..40289,40291..40365))
                     /gene="prfB"
                     /locus_tag="PXB09_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550889.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDL5232372.1"
                     /translation="MFELNPIKNQLTDLSERTAVIRGYLDFEHKVERLEEVNAELEQP
                     DVWNKPEKAQALGKERAMLEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE
                     ADELEKKLADLEFKRMFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKG
                     FKAELMEASDGDVAGIKSATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFS
                     AAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQN
                     GRSQHQNKDQAMKQLKAKLYELEMSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DHRTGVEHRTTQQVLDGDLDKFVEASLKAGL"
     gene            40621..41529
                     /locus_tag="PXB09_000215"
     CDS             40621..41529
                     /locus_tag="PXB09_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDL5232373.1"
                     /translation="MAKRPSDIDATLLQLEILRRIPKLPAKIDAKSLHQQLLDAGFER
                     DIRTVQRSLKMLCEHFDIECDERSKPFGYSWKIRSEGLALPILNEQQSLLLKLAEQQL
                     KYLLPANLMASMKPFFEQADRMVSGAKDKPEYQWLNKVCSTPTSLPLIPAKIKEEIFN
                     SVSQALFQNKLLKIEYQNQHGKKHQATIMPLAISQQGASIYLVCRYEGFDDNRLLALH
                     RIRKAEISTFSFERPKDFNLQAYQDAGHLGFGNGEKASLTFSISRDAGFHLTETPLAK
                     DQKILEESETHYRIQAIVADNDMLTW"
     gene            41830..42471
                     /locus_tag="PXB09_000216"
     CDS             41830..42471
                     /locus_tag="PXB09_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HDL5232374.1"
                     /translation="MPFQLTFCQQAGNQHQKNQDALFNGKAVYQWQLKNAESYLLDND
                     KVIFGVADGVSSHPRNHLASHYLMALLSQCQSLDSQWLRQAHGDFCEKLAKDYFGASC
                     TFVACELHHNGRGRMVNVGDSRAYKITANGEWQQLSFDHTILAEMKQKGLVKEGSNYA
                     SMYNGLTDCIVADFDADDFRIHIAEFQLEKGESILLCSDGLHEQLAPEAIQAI"
     gene            42638..>42843
                     /locus_tag="PXB09_000217"
     CDS             42638..>42843
                     /locus_tag="PXB09_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDL5232375.1"
                     /translation="MKNDFHYAAELIRNADGILITAGAGMSVDSGLPDFRSVGGLWNS
                     YPPLKKFNLQFMQIATPLAYQERP"
BASE COUNT        12468 a         8674 c         9495 g        12206 t
ORIGIN      
        1 accttgaggg taataacatt gtatttcata tttatccaat ctaggctgga ctaactgatc
       61 acctatcaag ttaaaataat aaaacaatac tttatcaaga tatctaccta tgactacatc
      121 tgccatactt ctgattgtgc catcacggca atcaattttt attgatggat tttttaatgc
      181 ttcatttatg tcttcacata tacctatgtc agaatatggg gtttttaagg aatttccgat
      241 acgaaaacca ttagctaaat gcatatcata tcggaaatta aatccagtaa atattctctt
      301 agggatttcc tttccgctaa agaaaattct ttcagatata tcttgctttt tcagagctaa
      361 gctccttgtc atgcacatat catttactgg atatttttgt tttgttaaat ctacaagata
      421 taagagccca tgtttttcca tgaattgcgt caaattagat aaataatctt cttgaaaccc
      481 tgcaaagcct ccagaaaatc ctaaagcttt tgagcaagca tttaacaaag tacagtgaga
      541 aattttttct ctatctctag aacaatcttt aacagatttt ttaattaatt ctggggaaat
      601 accataaatt ggtagaatat ggtatttttg taaaggtaaa tagctatggg tgttttttga
      661 catatattaa atcctctttg ttaattaagt tagaaaaatg cctctgtgaa aatcacagcc
      721 atactaggaa ataaaaggat ttaatttata aatgaattga ctataagcaa tataatctat
      781 cgaattatct cttttgttca aggcaagtat ggatacctga ccgcaggcct ggagatagaa
      841 cctacatata atatgctcta ctacattaag ccataaaaaa tagaaaatca agtgtttgtt
      901 caagttttta tgttattgaa tttacaataa ctacaaaaat ttatcttaat tggctcgatt
      961 gatttttaca caaaacatag ctaacatatc caaaatcact cacattagga gcttaaaaat
     1021 gacagcgatt actatccctc aatttgaaga ggtgacttct aagcaatttc aatctgagtt
     1081 cggcagaatt gttgatatcg taaaaggcaa aacccctgtg gcgattaccc aatatggcag
     1141 accgacaatg gtgctttttc cttacgatca agcggttgaa gctcggcgat tattagcaaa
     1201 acagcgtttg cttgaaatgc ttgcagagcg agataagaat ccgccggcag ctcttgcaga
     1261 aatcacgctt gaagagttgg ataaaatgat tgatgaggaa cgtaatgcac tctgattatt
     1321 tagtgattga tacgaatatt ttgattagtg gtttattgtt cccaaaatca aatcccaatt
     1381 tagcagtgaa aaaagcctta ttaggctata ccatttgtgt ctcgcaagcg acttttgacg
     1441 aatttttaga agtctccgct agaccgaaat ttgctaaata tttcagtatt caggaaaggg
     1501 aagaatttat tgccaatttg ttggatgcag taaagtttgt ggaaattaaa gaaacgatta
     1561 cagattgcca agatcccaaa gataataaat ttttagaagt ggcgatcagt gcaaaagcga
     1621 agtatttagt gacgggcgat aaaaaagatc tcctcagtat gaacccttat cggaatgttg
     1681 aaattatttc cgtcagcgaa tttttagcgg aaactcgcta atgaaacggt ttctcactct
     1741 ttttcttctc cttttttcat ctttttcatt agccgaaacc caccaaatcg gcattctcgc
     1801 tcagcgtggg gaagcctaca cccgcaccca ttggcagcct tgggtggatt ggttaaattc
     1861 gcagtttccc aacgagcggt ttgagctggt tccattgggg attaacgagg cgagccgccg
     1921 ggcggagttg gattttctgc tgaccaatca agctcagttt ttctatttga gtaaccaaaa
     1981 tgtgcgatgg cttgccacgc tcaacagtcc gttttcggca aatggtgagc aaggggcggt
     2041 gggcagtagc atttgggtgc gtgccgacag ccattatcag cagttaagcg atctgaaaaa
     2101 tcagactatc agtgcggtgg ataacgatgc tttcggcggt tttttgcttg ggttgtatca
     2161 gtttcatcaa gcaggaatgc ggcaaaatcg ggatttttcg gtgcagttta gcggttttcc
     2221 ggtggaaaat gcgttggctt tgctggcgga aaaacaggtg gaagcggcga ttgtaccggt
     2281 ctgtttgctg gaagagttgg agaaagaggg caagttcaag cggtcggatt ttcgcttaat
     2341 tttgcaaaac ccacaggcgc agggttgcct tgccagcacg ccgttgttgc cgaactggtc
     2401 gctggcggca atggaaaatg tgccaaacga gctggcggta cagcttgcca cacgcttgct
     2461 aaacagccac aatcccgacc taccccgctg gacgttgccg ttttcttccg cccaagccga
     2521 tcacattctg cgtgaactgt atcgccaccc gcaacaaaaa agcctgtggg caacggtgct
     2581 ggattgggtt cgtctcaata aattcggctt gttggcggtg gtgttgttca ttttgctcaa
     2641 ccttgtcgcc ctgcgttatc aggtctatcg caaaagcaag gcgttacagc aggcacactg
     2701 caaaatgcag cagtatcagc aggaactgac ccgagccgac cgccttgctt tgttgggcga
     2761 gatgacaacc ggttttgctc acgaactgaa acagccgttg tcggcggtgc gaatgtacgc
     2821 cgaggggctg aaaagccaaa acagcgatcc ttatcaacag cggattttgg ataagctgat
     2881 tgcgcaggta gatcgggcag tgaaaacgat gcagagcatt cgggactggg cgcaaaaccg
     2941 cccgagtggt gaaccgcaag cggtcatttt gaaccaattg attactaatg tgatcgagtt
     3001 tgtggcggtg gaaaatcgcc agaatgcaca aatctcgctg attgccgacc gcacttttcg
     3061 gcttaattta cacgccacgg tactggaaca agtactgacg aactgcctgc tcaacgccct
     3121 gcaagccggt gcaagcgaga tatcggtgcg gttacaagcg gtcgaaaacg ggctggaaat
     3181 tgcaatcgaa gacaacggcg gcggtttttc ccctgcccag cttgaatttc cgtttgtgcc
     3241 atttcgcacc gacaaaccac acggcttagg gctaggcttg gtgctatgcc aacggctgat
     3301 gcaatcgctc aacggacgga ttgtattggc gaacggggag aacggggcga aggtagtgct
     3361 tttactccct caaatataaa tgtaggggca ggtcctgtgc ctgcccgtaa atcctatcaa
     3421 attcagggcg ggcacaggac ccgcccctac ggaaaaaaga aaaaatgatt attcacattc
     3481 ttgatgacga agaaagcatt ttagacgcta tgtcgttcct gcttgccccg cttggggtgg
     3541 aaatccaaac gtggcaatcc agcctagatt ttttggcaca ggcggattta caccggcaag
     3601 gcgtgctgtt actagatatt cgaatgccgc tgccagacgg gcaacaggtt catcaacaac
     3661 tgcgagaggc acaatcgacc ctggcggtgg tgattatgac cgcccacggt gatgtgccga
     3721 tggcagtcgc tgaattgaaa aaaggcgcag tggattttct gcaaaagccg gcaagttttg
     3781 aacagctaaa acaggcgatt gcacaggcgg aaaaagtaag tgaaaaagcg gtgaaaattc
     3841 gtgaaatttc gcaaaattac gccaaattga cggaaaaaga gcgtaacctt gtgccactga
     3901 ttatgcaagg tttcaccaat aaacagatcg cagataaatt agcgatttca gtgcgtacgg
     3961 tggaagtaca tcgagccaat gtgatggaaa aaatgcaggc ggagagtttg gcggggctgg
     4021 tgcagatgat cggggagtta caatataaag gtagcggaaa ttgctctgct acctttagtt
     4081 tcgacttttg ccgtattaat ttacttcttt aaactgaatc attcccgctt cggcaaaatt
     4141 gttatcgtca tcttcgtata agaaggtttt ggcttcaatt ttgacatcat caaaagcggt
     4201 gtcgccttct atgccttcaa tggtttgacc gtgtttaatc cctttaaaat caaacaattt
     4261 cggatcgcat aagtgggatg gcacgatatc ttgcaaagca ctgaacattg tttctaaacg
     4321 ccccgggtat tggcgatccc aagtattcag catttctttc accacttggc gttgtaaatt
     4381 aggctgagaa ccacacagat tacacggaat aatcgggaac tgcttggctt cggcatattt
     4441 gataatgtct ttttctttac aataggcgag tgggcggatc acaatttgct tgccgtcatc
     4501 agagatcagt ttaggtggca tacttttcat tttgccgccg tagaacatat ttaagaataa
     4561 agtcgccagc atatcgtcac ggtgatgccc taatgcaatt ttggttgcac ccaattcggt
     4621 ggcggtgcgg tataaaatcc cacggcgaag tcgtgagcaa agtgaacagg tggttttgcc
     4681 ctccggaatt ttctctttta cgatgccgta ggtgttttct tccacaattt tgtattccac
     4741 gccaatgctt tctaaatagc gaggcaatac ctcttccgga aatcccggtt gcttttggtc
     4801 taaattgacc gctaccacac taaaattcac cggtgcactt tgctgtaaat tgagcaaaat
     4861 atctaacagc gtatagctgt ctttaccgcc ggaaaggcag accattacac ggtcgccctc
     4921 ttcaatcata ccaaaatcgg caatggcatt accgacatta cggcgtaaac gtttttgtaa
     4981 cttgttgaaa ttataagtaa tttttttatc agatttttga atatcgtctg tcataatagt
     5041 tgtactaggc ttagaaatta gcggtgtata gtaaagattt cgcactattt tgcaagttaa
     5101 ttattcggct tcagcgtagc gatatagtta caactcacat cattattgag ccaaaatttt
     5161 tcggttaatg ggttgaaatg gtagcctctc atctcttggc aacgtaaatc agcctgatcg
     5221 caccaagcta acaattcggc aggcttgatg aatttttcaa attcgtgcgt gccttttggc
     5281 aacattttca gcacatattc cgccccgata attaccaaca tataggcttt aaaagtacgg
     5341 ttgatggtag agaaaaacag cacgccgtca ggtttgagca gggctttaca gctttgaatg
     5401 atagaaagcg gatcgggaac gtgttccagc atttccatac aagtaatcac atcgaatttt
     5461 tcttgattac aagcggtcat ttttgctaaa aaattttcaa tcgtggtttg ttggtaatca
     5521 atctctaacc cactttcttt ggcgtgctgc tttgccactt caagcggttg agaggtcata
     5581 tcgatgccgg taacaatcgc tccctgtttt gccattgcct cacttaaaat accgccacca
     5641 cagccgacat ctaacacctt tttgccaaat aaaccgttcg atttttctaa aatataggct
     5701 aaacgcagtg gattaagcag atgaatcggc ttgaaactgc cgtttggatc ccaccaggtt
     5761 ttagccatat tttcaaattt tgtgatttct tgctgatcga cgttttgcat aaactgttcc
     5821 tatggtaaat ttagggcatt actataacgc atttagccta aaaggaaaat cagaatgacc
     5881 cgaattaacc ttgttccgcc aacggaatta tgcgatcaac atctgcttgc cgaacatcgt
     5941 gaacttactc ggattccgaa tgcggtagcg aaaggcaaat ttagcctaaa aggacagcca
     6001 gaagattaca aactgggcga gggacacgtt cggtttttct tcaataaact cacgtttttg
     6061 aaaaagcgtt acgatgcgtt acacgaggaa tgtttagcaa gaggttttaa ggtgcaatat
     6121 ttctgggcgg aacatttacc acaagatccc tctctctggc tagattatca gccgactgaa
     6181 accgctctga ctgtaaatcg ggagcgaatt gcattaagaa tgccggcaaa tccacgtttt
     6241 agcgaaagaa aatgaccgct tgtacgcctt tttgttgctt tttatgctat aatctcgcca
     6301 attttttcgc cttatttaag gctcttttac taataaaatt aggaaatttc aatgagcgaa
     6361 ttagccaaag atattattcc cgtaagtatt gaggacgaat taaaaacctc ttaccttgac
     6421 tatgcgatgt cggtgattgt tgggcgtgcc ttgcctgatg tacgagacgg tttaaagccg
     6481 gtacaccgcc gagtgctttt ttcaatggat caaaacagca acacctataa taagccgcac
     6541 gttaaatctg cccgtgtggt cggtgatgtg atcggtaaat atcacccaca cggtgacttt
     6601 gcggtgtata acactattgt gcgtatggct caaccgttct cactacgtta tatgttggtg
     6661 gacgggcaag gtaactttgg ttctattgat ggcgatgcac cggcagcaat gcgttatacc
     6721 gaagtgcgta tgcagaaaat tacgcaggaa ttattaaccg atctcgataa agaaacggtg
     6781 gatttctcac cgaactatga cggcaaagag atgattcctg atgtattgcc aaccaaaatt
     6841 ccggctctgt tagtcaatgg ttcttcaggg attgcggtcg gtatggcaac caatattcca
     6901 cctcataatt taggcgaagt attagatggt tgcttggcgt atattgaaaa tgaacagatt
     6961 agtgttgaag agctaatgcg ttatatcccg gggccggatt tcccgaccgg ggcgattatc
     7021 aacggtcgta aagggattga agaggcttac cgcaccggtc gtggcaaggt gtatgtgcgc
     7081 gcgaaagcca gcgtggaaac aactgataaa gggcgtgagc aaattgttgt aaccgaactg
     7141 ccataccaag tgaataaggc aaaattaatt gaaaaaattg ccgagctggt taaagagaag
     7201 aaaatcgaag gcatcagcaa aattgatgac tattccgata aaaaagggat ttcgattgtt
     7261 attgaagtca agcgtgatgc agtgggtgaa gtggtgttaa accaccttta ttctttaacc
     7321 caaatgcagg tcacgtttgg tatcaatatg gtggcgttag ataatgggca gccaaaagtg
     7381 ctgaacttac gccagatcat cgaagccttt gttaaacacc gtcgtgaagt ggtcacacgc
     7441 cgtacgattt ttgaattgcg taaagcccgt gaacgtgccc atattttaga aggtttggcg
     7501 attgcgttag cgaatatcga cccggtaatt gaattaattc gagcctcaaa aaccgcagaa
     7561 gaagcccgtg aaggcttatt ggctcgccct tgggcattag gcaatgttgc accaatgtta
     7621 gaggctgctg gtgttggtgc ttcccgaccg gaagatttac ctgaacactt aggagtgcgt
     7681 gatggcgaat actatttatc tgaagctcaa gccagagcga ttttagagct acgcttacac
     7741 cgcttaaccg gtttagaaca cgagaaaatc gttgaagaat acaaagaact cttaactgaa
     7801 attggcgaat taatccacat tttaaccagc ccagaacgct taatggaagt gatccgtgaa
     7861 gagttagaac gtgtaaaaac cgattttaat gatgaacgcc gtactgaaat taccgcagcc
     7921 tctggcgaca tcaacattga agacttaatc gcacaagaag atgtggtggt tacgctttct
     7981 cacgccggct atgtgaaata tcagccgtta tccgactacg aagcacaacg ccgtggcggt
     8041 aaaggtaagt cggcaaccaa gatgaaagaa gatgatttca tcgaaaaact cttggtggca
     8101 aacacccacg acaccattct ttgcttctca agccgtgggc gtttatatca attaaaagtg
     8161 tatcaattac cgcaagcaag ccgtggggca agaggcacgc cgattgtgaa tattctgccg
     8221 ttagtgaaag aagaaaacga acgtattacc gcgattctac cgattccaaa cggtgaattt
     8281 agtgccgata agtttatctt tatggcaaca gctagcggtg tagtgaaaaa agtttccctt
     8341 gatgccttta gcaacgtgcg tgcaagcggt ctgattgcgt taaaacttcg tgaaggcgat
     8401 gagctgatcg gggtagatat tactgatggt aacagcgaaa ttatgttgtt ctcggcacaa
     8461 gggcgagtag ttcgctttgc cgaaacagca gttcgtgcga tgggacgtac cgccaccggc
     8521 gtacgaggta ttaaactttc taccaccgaa atttcaagcg aagaaattga agaagctgaa
     8581 attattgaaa ctgacaatga agaggcagaa gattcctcca gcgtcagcct tgataaagac
     8641 cgtgtggttt ctttagtgat tcctcgcacc gaaggcgata ttttaaccgt cacccaaaac
     8701 ggctacggta aacgtacggt gattagcgaa tatccggtga aatcccgagc aaccaaaggg
     8761 gtcgtttcga ttaaagtgaa tgaacgaaac ggcaaagtgg ttgcggcagt tcaagtagag
     8821 gaaaccgacc aaattatgtt gattaccgat gccggcacgc tggttcgcac ccgagtggca
     8881 gaagtcagcc tcgttggacg aaacacccaa ggcgtacgta ttattcgcac cgcagaagac
     8941 gaacaagttg ttagccttga acgagtctgc gagcctgaag acgatgaaaa tgaaagccta
     9001 gacgcattag aaaatgccga aacagcagaa acatcaactg aagaataatc ttaactaaac
     9061 aagcggtcga attttcacaa ttttttgcaa aaatagaagg aaattcgacc gtttttggat
     9121 catacagtag ataataaaaa ctatggcact tatcaatctt tccaacgcct atttaggctt
     9181 tggcgatcat cctttattgg atcatactga attacatatc gaacccggcg agcgggtttg
     9241 tttggtgggg cgtaacgggg cgggtaaatc gaccctgatg aaaattctgg cgggcgaagt
     9301 tcagcttgat gacggcaagt tggtatttga aaaagacatt gtcgttacac gtcttgaaca
     9361 agatccgccc cgccatattg aagaaacggt gttcgattat gtggcggagg ggattgccca
     9421 tcttgccgac ttattgaagc aatatcacca catttccctg caaatgcaga ccgattacag
     9481 cgatgaactg ctcgccaaac tttcagcggt gcaatcgcaa ttagaacacg ctaacggttg
     9541 gcagtttgaa aaccgcattc aagacacctt gaaactgctg gaactcgccc ccgacaaacg
     9601 cctgtgcgaa ctctcaggcg gttgggtacg ccgtgcggca ttggctcggg cgttggttgc
     9661 cgatcctgat gtattgctgt tggacgaacc gaccaaccac ctcgacattg aggcgattgc
     9721 gtggctggaa aatctgttat tggatttcaa aggcagtatt atttttatct cgcacgaccg
     9781 tgcctttatc cgcaaaatgg cgactcggat tgtggattta gatcgaggca aattggtttc
     9841 ctacccaagc aattacgata aatacttgga agaaaaagcc gaggatctgc gagtagaagc
     9901 gttgcaaaat gagctgttcg acaaaaaact cgcccaagaa gaagtctgga tccgtcaagg
     9961 gattaaggca agacgcaccc gaaacgaagg gcgtgtgcga gcgttgaaag cgttgcgtga
    10021 agagcgtaga aaccgccgag aggtacaagg cacggcgaaa attcagatcg acaacaccgc
    10081 acgcagcggc aaaattgtgt ttgaagtgga aaatgccggc tatgaaatcg gcggcagaac
    10141 cctgctgaaa aatttcagca ccaccatttt gcgtggcgat aaaattgccc tgattggagc
    10201 gaacgggatc ggcaaaacca cgctgatcaa gctgttactt ggcgaaattc agccgacatc
    10261 tggttcagtg cgttgtggca caaaattgga agtggcgtac ttcgaccaat accgagtcga
    10321 tcttgaccct gaaaaaaccg tgatggacaa cgtggcagac ggcaagcaag atgtagaagt
    10381 aaacggggtg aaacgccacg ttcttggcta tctgcaagac ttcctgttcc cgccaaaacg
    10441 ggcgatgaca ccggtgaaag ccctctcggg tggtgaacgc aactgcttgt tgctggcaaa
    10501 actgttactc aaaccgaaca acttgctgat tttggacgaa ccgaccaacg atttggacgt
    10561 ggaaaccctc gaactgctgg aagagatgct caccgactat caaggcaccc tgattattgt
    10621 gagccacgac cgtcaatttg tggataatac cgtaaccgaa tgctacttct tcgagggcga
    10681 aggcgtggtg aataaatatg tcggcggcta tttcgatgcc aaacaacagc aggaaaatta
    10741 cttcgccgcc actgccgaca agcggttaaa ttcgagtaaa aatttgcaaa aaatagagga
    10801 aaaagcaccg cttgcggagc aagagaaaca gaaagccgat caggaaaaaa cgaaagcaga
    10861 gccgacgaag aaaaccaaac tttcctacaa agaacagcgt gaactggacg agttaccggc
    10921 taaaatggaa cagcttgaag ccgacattga agccctgcaa gccgaagtaa atagtgccga
    10981 attcttcgcc aaagatccaa gctacaccaa cgcccagcta caaaaacttg ccgataccga
    11041 agccgcgtta gagcaagcct ttgagcggtg ggaagcgttg gaaaatatta aaaacgggaa
    11101 tatctaatgt aggggcgaat gattattcgc ccttgatgga taaaatgatt gggcgaaaaa
    11161 tttttcgccc ctacaaatgt gaagcaaaat gacagaaaga ttagataact acgaacaacg
    11221 ttttggtggc attggtcgcc tttatacgcc ggaaggattg gagaaactac gccgttcgca
    11281 tatttgcgtg attgggattg gcggggttgg ctcgtgggca gtggaggcat tggctcgctc
    11341 aggtatcggt aagatcacga tgatcgatat ggacgatatt tgcgtgacca atatcaaccg
    11401 ccaaattcac gcaatgagtg gcacggtggc tcaactgaaa accgaagcga tgaaagagcg
    11461 gattgagcgg atcaaccctg aatgtgtggt ggaaattatt gatgatttct taacgcagga
    11521 taatctcgca gactacctca atcgaggata tgactatgtg atcgatgcga ttgacagttt
    11581 gcgggtaaaa gcggcgatga ttgcgttttg taaacgcaat aagatcaaaa ttatcaccac
    11641 cggcggggcg ggcgggcaga ccgatccgac caaaattcaa attaccgatt taagcaaaac
    11701 ggtgcaagat ccgttggcgg caagggttcg tagcctgttg cgtaaagagt acggtttcag
    11761 caataaaaac aaattcggcg tggagtgcgt ttcttcgact cagcaactga ttttcccaca
    11821 aatgggtgag gcctgtgagg tgtcggcaac aatgaactgt gccaacggct ttggagcggt
    11881 gacaatggtg acggcaacgt tcggcttttt tgcggtgagt cgggtgattg ataaactatt
    11941 aaaataacaa gcggtcatat taaatgaatt ttttgcaaat caaggagtaa ataatggcaa
    12001 tacatcgagt caacccgaaa gggagtatgg aacagctttc ccatttggaa atggagttgt
    12061 tggcaaagaa tacgcagggt aatttgcatc aactttatcg taattgctct ttggcggtgc
    12121 taaattccgg tgtgcatacc gatgacagcc gagcgttgtt aagccaatac cctgattttg
    12181 aaatccgctt attaacccgt gaaaaaggcg tgtcgcttga attgcataat ccacccgaaa
    12241 ctgcgtttgt tgacggcaag atgattttga atattcaata tcaccttttt gcggtgctgc
    12301 gggatattgt gtttgtgaat gcgttaaaaa atgcgattag accgcttgaa gagacttctt
    12361 tagaagcctt aaccacgaat accgtatttt cgattttgcg gaatgcgaaa gcgattgaaa
    12421 tgaataccga cccaaatttg gtggtgtgct ggggagggca ttcgattaat gaaaccgaat
    12481 accaatattg ccgtgccgtc gggcaagagt ttggcttgcg tgagctgaat attgtgaccg
    12541 gttgcggagc cggtgtgatg gaagccccga tgaaaggagc ggctatcgga cacgccaatc
    12601 aacgttataa aaacgggcgt tttatcggca ttaccgagcc gtctattatt gcctccgagc
    12661 cgccaaaccc gattgtgaat gaattggtaa ttatgccgga tattgaaaaa cggttggaag
    12721 cctttgtgcg tttagggcac gccattgtgg ttttcccggg cgggccggga acgctggaag
    12781 agttgctgta tattatcggt attaagttaa acccggctaa ccatgctcag caattaccac
    12841 tgattttaac cgccccgaaa gaatcggcag actatttcta tgccatcgat caatttattg
    12901 gcgaaacttt aggcgaagaa gctcgcagtt tgtatgaaat tattattgat gactcggtgt
    12961 tggtggctcg taaagtcaag caagcgatga ttgaggtaaa aagcagccgt tatgaaagtg
    13021 gcgatgctta taatttcaac tggtcgttaa aaattgagga agattttatt acgccattta
    13081 ttccaaccca cgaaaatatg gcaaacctga atttaagttt agcacagcca aaagagcagc
    13141 tggctgcgaa tttaagacgg gcattttcag ggattgttgc aggtaatatt aagccggaga
    13201 cctccgattt aattgagaaa tatggggtgt ttaaattaca cggcgatcgt aaattaatgg
    13261 agcatataga taaactgttg gagcgttttg tggttcaaca ccgtatgaaa attccaacgg
    13321 gtgaggcgta ccaaccttgc tatgaaattg taaaagggta atgctaacaa ggggtaaggt
    13381 atgtatttaa agcatattga aatcagtggc tttcgtggta ttaaccattt atcgctccag
    13441 ctacgaccaa atatggtatt gattggcgaa aatgcgtggg ggaaatccag tctgattgat
    13501 gcattaagcc tgatttttaa ccttgagcag gcgttgtatc aatttcagtt caaagatttc
    13561 catattcaat acaccgatac ccccaaccaa gtgcgggaca ttcaactggt gtttaccttt
    13621 tgtgaagagc atcagcacga tttagcggtg caatttcccg cttatttggc acaagccgcg
    13681 ttttatattg ataatcaccg ctgtgtttcg cttgccgtaa ccggaaaatt acacggagag
    13741 cagattagca ccgactatca atttgtggat caaagcctaa aaccgatcca gatagaacaa
    13801 gcggaaaacg ccattcggca gtttatttac catcaccctg tttatcgcct gcgtgatgca
    13861 aggctcaata acagggtgca taatgaatta ttacttaaag gatcgtctca acttgaagac
    13921 gattttcaac gtgaattaaa cgccctctct tcgctactga aatactattt tctaaccagc
    13981 caaagtcgct atttgatcaa aaccagtatg caagacaccg cattgtggtg ggaaaaagta
    14041 aaatccctct gtttacgcct aaaacagcag ccggaattgg tcgaatctgc tcagcagcat
    14101 atttctactc tatttttgtt taatcctaga tctacagtaa tagaaaagcc gattatttta
    14161 tttgaagatc tgaatgctca actacaccct cgaatgattg cgattttttg ggaactgctc
    14221 ggttttttac ccagccaacg gatcaccact actaattcta ttgaattgtt atcgcaagtg
    14281 cctctgcgtg aaatctgccg tttggtgcgt catcacgatc atacccaagc ctattggctt
    14341 gaacgccaca gtttaggcaa ggaagatttg cgaaaattaa cctttcatat tcaccataat
    14401 cgtggcttgg cactgtttgc taaagcgtgg attttggttg agggggaaac ggaggtttgg
    14461 attttgcaag agctggcgag attattagat attcatttgg aaatggaagg gatcaaaatc
    14521 gttgaatttg ctcagtgtgg cttacgtccg ttaattaaat acgccagagc aatggggatc
    14581 gaatggtatg tgctgactga cggtgacgat tccggcaaac gttatgcaga tacggtaaaa
    14641 agtatggaag aggattttgc tcaccggctc acgatgttgc cacaaaaaga tatcgaacat
    14701 tttttctaca aagcaggctt gcggaatgtg tttatacagc ttgcaaattg gcgttcacaa
    14761 gaaaaatatc cggtgtccta catcattaaa cgagcgattc aacgaagctc aaagcctgat
    14821 ttagccattg cattagccaa tgagatgggg caacggggag agcattcaat tccaacttta
    14881 tttaaacaat tatttgcaga tgtgctggca ttgataaaca aagtatagaa tacaagcggt
    14941 taaatttgac aaaaaattgc caattttgac cgcttgtttg cttgtgatga aaaccaatca
    15001 tacaaaactc taatttattt caagtgcaag ctattatttt atgcgttatg cttatttgga
    15061 ataaaaaaat cgggttagtt gattgacata gcattctaga cgtctaaaat aaccaaaaat
    15121 aatagttaat tgaatgtgga taaatagaaa atgattcagc tgaaaaatat cagcaaacaa
    15181 tttgaggtaa agggcaaaaa aattaccgct ctggataatg taaacctaga agtaccaaga
    15241 ggcactattt atggtgtcat tggggcatca ggggcaggaa aaagtacctt aattcgctgt
    15301 gtaaatttat tagaacgccc aacaatcggg caagtgattg tcgatgggca agatttaacg
    15361 gcaatgtcgg ataaagagtt gattcacgct cgccgtaata ttgcaatgat tttccaacat
    15421 tttaatttgc tttcatcaca aactgtattt gaaaacgtgg cgttatcgtt gcgtttaagc
    15481 aatacgccaa aagagcaagt tgagaagaaa gtcaatgagc tgttggattt agtggggtta
    15541 acagatcgta aagatgttta ccctgcaaat ctttccggtg ggcagaaaca gcgtgtagcg
    15601 attgctcgtg cgttagccag cgatccacac gttttgttgt gtgatgaagc gaccagtgcg
    15661 ttagatccgg cgactacgca atccattttg cagctattaa aagatattaa taaacgtctt
    15721 ggtttgacga ttttattaat cactcacgaa atggaagtgg taaaacgcat ttgtgaccga
    15781 gtagcagtga ttgataaagg gcagttgatt gaatctggct cggtaagtga aattttctcg
    15841 aatccgaaaa ccgaattagc tcagaaattt attcaatcga ctttccattt tgaattaccg
    15901 caagaatata ccgagcagct ttcaagttcg ccgactgaac atagtaagcc gattattaaa
    15961 tttgagttta ccggacgttc ggtggatgca cctttgcttt caatggcatc gaagaaattc
    16021 ggcattgatt ttagtatttt gatgtcgcaa attgattatg caggcggggt caaatttgga
    16081 tttgtaattg cagaagtgag tggtaatccg gattccattg cagaggcaaa attttattta
    16141 attgataaca atgtaaaagt agaggtgtta ggctatgtgg gctgatttta tgcaggagat
    16201 gacgccacag atgtggagct tagtatggga atctactttt gaaaccgttt atatgggctt
    16261 tgtggcaacg gcattggcgg tagtcatcgg tttaccgatt ggtttcttgg cgtttttaac
    16321 cggtaaaggc gaaattttag aaaatccgag attacaccaa gtgttagatg tcgttattaa
    16381 catcgggcgt tcgattccgt tcattatttt attgattatt ttgttgccat ttactcgctt
    16441 agttgtgggc acaacattag gcacaacggc agcgattgtt cctttaagtg tttcggccat
    16501 tccgtttttt gcccgtttaa cttcaaatgc gttgcttgaa attccgtccg gtttaacaga
    16561 agcggcaaaa tcaatgggag caacaaattg gcaggtagtg acaaaatttt atttaccgga
    16621 gtcattaccg attttgatta atggcattac gctaacgctg gttgctttaa ttggctactc
    16681 agcaatggcg ggggctgttg gtggcggcgg tttaggcaat ttagcgatta gctatggcga
    16741 acaccgtaat atggtgtatg tgaaatggat tgctaccatt attattgttg cgattgtgat
    16801 gattagccaa aaattgggtg atcatttagc aaaacgttac gatcatcgtt aattttattt
    16861 aaaaagaggt ttctatgagt ttcaagaaaa ttttaggcgt tgcattggtt tctgcattag
    16921 cattaaccgc ttgtaaagaa gagaaaaagg cagaatctac cgctgctccg gcagctcaag
    16981 ctccggctaa aatcaaagta ggggtaatgt caggccctga gcataccgtt gcagaacgtg
    17041 cagcacagat tgcaaaagaa aaatatggtt tagaagttga gttcgtttta tttaacgact
    17101 acgctttacc gaatactgca gtaagtaaag gtgatttaga tgcaaacgca ttccaacaca
    17161 aaccatattt agataaagac agccaatcaa aaggtttaaa caacttagtg attgtgggta
    17221 acacctttgt ttatccgtta gcgggctact ctaaaaaagt gaaaaatgtg tctgagttag
    17281 cagaaggtgc ggtaattgca gtaccaaatg atccttcaaa cttagctcgt gctttgattt
    17341 tattagaaaa acaggggtta attaaattaa aagataatac caatttattc tcaacttcag
    17401 tggatattat cgaaaatccg aaaaacttaa aaattaaaga agtggatact tcaattgccg
    17461 caaaagcgtt agatgacgta gatttagcgg tggtaaataa cacttatgcc gggcaggtag
    17521 gcttaaatac ccaagatcac ggtgtatttg ttgagtctaa agattcaccg tatgtgaata
    17581 ttattgtggc tcgccaagac aataaagatg cagctaatgt acaaaacttt attaaatctt
    17641 accaaaccga agaagtgtac caagaagcac aaaaacactt taaagatggt gtagtaaaag
    17701 gttggtaatt tagctgattt ttacttaaat ggcgattaag cgctaggtta atcgccattt
    17761 tcatctttaa aatataggaa ggagcaaaca atgaacttta aaaaattatt aggtgtggcg
    17821 ttagtatctg ccttagcact tactgcgtgt aaagatgaaa aagcacaagc acctgctaca
    17881 acagctaaaa ctgaaaacaa agccccatta aaagtgggtg tgatgaccgg ccctgaagcc
    17941 caaatgaccg aagtggcagt gaaaattgca aaagagaaat atggcttaga tgtagagtta
    18001 gtgcagttta ctgaatacac tcaaccaaat gccgcacttc attctaaaga tttagatgct
    18061 aacgcgttcc aaacggtgcc ttatttagag caagaagtga aagatcgtgg ttataaatta
    18121 gcgattatcg gcaatacgct agtatggcca atcgcggctt attctaaaaa aattaaaaac
    18181 atttccgagt taaaagacgg agcgactgtt gcgattccaa acaatgcaag taatactgct
    18241 cgtgcgttat tattgcttca agctcacggt ttattgaaat taaaagatcc gaaaaatgtg
    18301 tttgctaccg aaaacgatat tatcgaaaac ccgaaaaata tcaaaatcgt acaggcggat
    18361 acctcacttt taacccgtat gttagatgat gtagaacttg cggtaatcaa caacacttac
    18421 gcaggtcaag ctgggttaag tccggataaa gacggtatta ttgtggaatc taaagattca
    18481 ccgtatgtga atttagtggt aagtcgtgaa gataataaag atgacccacg cttacaaact
    18541 tttgtgaagt cattccaaac cgaagaagta ttccaagaag cgttaaaatt atttaacggt
    18601 ggtgtggtga aaggttggta atcagttgga cggcatattc tgccgtcctt ttcttaaaag
    18661 gagaaacaga taatgaaaat aatgaaatta gccggtgcag ttgcaatttt ctcgcttttt
    18721 ttaaccgctt gtaatgataa agccgaaaag ttgaaagtcg gtgtgatttc cggccctgaa
    18781 cataaggtaa tggaagtggc ggcaaaaatt gcaaaggaaa aatataaccg tgatgttgaa
    18841 ttagtggtat ttaccgatta tgccacgcct aatgcagctt tagataaagg cgatcttgat
    18901 ttgaatgctt tccagcataa accttattta gataaccaaa ttcaggaaaa aggctataaa
    18961 ttagtgccgg tcggcaatac ttttgtttat ccgattgcgg cttattccaa aaaaattaaa
    19021 tcgctggcag agttgaaaga tggtgatact attgcagtgc ctaatgatcc gactaattta
    19081 gcccgtgctt taattttatt ggaaaaacaa gatttaatta agctgcgagc agatgcaggc
    19141 ttaaaagcaa ccagtgtgga tattattgaa aaccctcgta aattggtgat ccaagaaatt
    19201 gaagcaccat tattgcctcg aacgttggac gatgttgcct tttcgattat taatactacc
    19261 tacgcagggc aaaacggttt aacgccaacc aaagacggaa tattcgttga agacaaggat
    19321 tcgccttatg tgaatttaat tgttgcccgt gaaaataacc aacattctga agccgtaaaa
    19381 gatttggtga aagcctacca aacagaagag gtgtataaca aagcgaatga agagtttaaa
    19441 ggggcgatga taaaaggctg gtaattgaag ataaataagg catagattcc tatgccttac
    19501 tttttatgtt acagacctgc tccggctctt aatgcttcgg ctttgtcagt tttttcccaa
    19561 ggaaaatgtt tacgaccgaa gtgtccgtag gcagcggttt cacggtagat tggtttgatt
    19621 aaatctaaca ttttgattaa gccatacggg cgtaagtcaa agttttggta gattaatttc
    19681 acaagtattt cgttgctcac tttacctgtg ccgaaggttt cgaccataat tgatgttggg
    19741 tcagccaccc cgatagcata agaaagttgg atctcacagc gatcggctaa gcctgcggca
    19801 acgatatttt ttgcgacata acgagcagca taagcagcag agcgatccac ttttgacggg
    19861 tctttaccag agaatgcacc accaccgtgg cgagccgcac caccgtaggt atctacaatg
    19921 attttacgcc cggttaaacc acagtcaccc attggaccgc caatcacaaa acgaccggtt
    19981 gggttgatga aatatttggt gttttggctg agccattcgc ttggtagtac cggtttgatg
    20041 atctcttcca tcaccccttc aattaactct ttttgcgaaa tatgctctgc gtgttgtgta
    20101 gaaagcacta cggcatcaat gccgataatt ttattgttct cataagcaaa tgttaattgg
    20161 cttttagcgt cagggcgtaa ccaatcgagt ttgcccgatt tacgcacttt tgactgctgt
    20221 tccattaagc ggtgtgcgta agtaattgga gccggcatta acacctcggt ttcattggta
    20281 gcgtagccaa acataatccc ttggtcgccc gcaccttgct ctaacggatc ggcacggtca
    20341 acgccctggt tgatgtccgg agattgttta ccaatcgcat ttaataccgc acaagagtga
    20401 gcatcaaagc ccatatcaga gtgagtatag ccgatgtcgc aaatcacttg gcgggttaag
    20461 ttttcaatat ccacccacgc agaggtagtg atttctcccc ctactaatgc cataccggtt
    20521 ttcacataag tttcacaagc aacgcgtgct ttagggtctt gttttaaaat ttcatctaat
    20581 accgcgtctg aaatttggtc tgcgatttta tccggatgcc cttctgaaac cgattcagaa
    20641 gtaaataaat taattgccat ttgtattcct ctctatctta aatatggatt attaatagta
    20701 gggacgggtc cagtgcccgc ccataaatta tataaaatgt ttggacaggc acaggaccgg
    20761 tccctataaa atttgtttgg aagtgtttcc gtctagacgt ctataatata ttttttgaac
    20821 gttttaggca aatagaattt gtttatttgg ctaaatatgc ccttaaacca gccaacgcat
    20881 ttttggcatc ttctacccct aaatcgtaca ttgcttgtat tttatttaca tccgtttcaa
    20941 ggcgactgat tttgactgtt ctgcttggac gaatcacaaa aatctgttgt ttttcattga
    21001 gttgaataat ctgctcaacg gcttgattat attccgcata gcggttttcc cagcgttgca
    21061 ctaatttcgg atatttttta taaaaacgtt taaacagcca catcgagctt ggtttcttac
    21121 ggtattcaag tgggcgagta agcaccacga taattttgtc atatcccatt tcaataaatt
    21181 tctgcaccgg aatactgtct gacacaccac cgtctaaata ttttttaccc tcaatttcga
    21241 ctattttgga tacaatcggc attgaggaag tagctcgaaa ggcttccatt tgctcgaaca
    21301 cattgtcaat tttgatgtat tcgggctcac cggtttcgac attggttaca gtaacccaaa
    21361 agtccatacc ggaatcctca aaggcttgtt ggtcaaacgg atccagtttg gaagggagtt
    21421 catagtaagc aaaatcccga ttaacgatat tgccggtggt aagcaagctg tgtaacccca
    21481 tataccgctt atctttagcg tattttttgt tgtatcgcaa cgccctacct ttttgttttg
    21541 aaggcaaatt cacgccaaat aacgcaccgg ctgaaacacc gattgctcca tctatatgaa
    21601 tatgttcatc taaaaataca tctaacacgc cggcagtaaa aatacctcgc aaaccaccgc
    21661 cttccagcac taatccaact ttcatatcat tctccctgta atttgtgtat tataacccga
    21721 attatcttgc taggagaaat cacaatggct gatgcagaat ttatggattt cctgttagat
    21781 caactaagcc cgatttccgg tttgcgttcg aaaaaaatgt ttggtgaata ttgcttgttt
    21841 tttgataata aaattgtcgc tattatcagc aaagattatc gcatttttgt caaagctaat
    21901 ccgcaaacct tgccgttatt cttagctgaa aatgccgaac aatttcacta ttttgctaaa
    21961 ggaaaagtgc aaaaaatgca ctactggagc attccggaat tagcgattga agaagccgat
    22021 gaactggtca aatggattcg gctaggctta caagcggtgt aatttagcga aaattttgta
    22081 aaaaaacgct aaaatatgcc cgcttgttag ggggggggac ctaatatttc tatactttaa
    22141 gattttatat ttatgaacca aaaaaaatta gtttctttga ttgtcgttat tgtgttggca
    22201 atcatttctc aaatttttag cttttttgat aaaaaagagc cttcaaaagc acaagaaaaa
    22261 tcgacccaga gtagtcagtc tcatcaagtt tcaacttcat cactagggaa ctatgatgtg
    22321 cagatgaaaa acgaccgttt gaaacagcat attgtagata ccgattatta caccttagcg
    22381 ttgtcgtggt cgccggcgtt ttgccaaaaa caaaagcgaa ataatcacgg taaaattccg
    22441 tctcatttgg aatatcaatg tggtggctca gcggattttg gttgggttat tcacggctta
    22501 tggccgcaaa gtggcaaggc aagaagtgtt gatgaacacc ctcgttattg ccaaggcgat
    22561 ttgccgatgg tggcagagca gacgattaag caatatttac ctgaatcgcc gggggcaact
    22621 ttgttgcaag gcgaatggga aaaacacggt gcttgtgcct ttaaccaagc ggatgattac
    22681 ttcgccaaac aaaaagagct atttaatcag ctcaaattac cggataccga aatgtctaaa
    22741 ttagcactgt ttaactggat gcgagccaat aaccctcatt tgcaaaatgt ctatttaggg
    22801 ggtagcaaag atgagctgta tatttgctat gataaagcat ttcaaccaat ggattgccca
    22861 cgctaatggc agatcttcgc caactgaaaa tgcaggttca gcgccaatta aagcgtgatc
    22921 ttgaacgtgc aaatcactat tttaatacca cttttacgcc accaagtatt agctatgcgg
    22981 tgcgtggcgt aaaagccggt gtggcttatc ttgaacgcaa cgaagtacgg tttaatcctg
    23041 tgttattgca agaaaatgaa caggcattta tccgccaagt tgtgccgcac gaactggctc
    23101 atatcttggt ttatcaacat tttgggcggg tacaatctca tggtaaagag tggaaaatga
    23161 tgatggaaac cgtactgggt gtgccggcgg aaatttacca ttgttttgat acccaaagtg
    23221 tgcaacagca atttagttac caatgtgcct gccagactca ccagctttcg attcgccgac
    23281 acaatgccgt gatgcgagat aaaaaaagct atatttgccg tttatgtaaa actcaactcc
    23341 attttgtaga aaaaagttaa tgtggagaaa agttaagaga atgttacgat ttagctagac
    23401 attcctgttt aaacgcctac aatttgccgt agtttttatt tttaatttta tttccggagt
    23461 atttatggaa acaattgtaa ttgtaggtgg cggtgcaggc ggtttggagc ttgcaaccta
    23521 tctaggcaac aaattagggc gtaaacaaaa ggcaaaagtg gtgctgattg accgcaatgc
    23581 aacgcattta tggaaaccac tgttgcacga ggtggcaacc ggtactattg atgagggaac
    23641 tgatgcgtta agctatcggg ctcacgctaa aaatcatagt tttgaatttc agcaaggtac
    23701 gctggtggcg gtagatagag agaagaaaac ggtttcactc gccccgattt ataatgatca
    23761 aaaccaactt ctcgttaaag aacgccatat cagttatgac aaattagtga tcgcgatcgg
    23821 cagtaaatcc aatgattttg gcaccaaagg ggttgcagaa aattgcattt tcttagatgg
    23881 ctcagagcaa gcaaaagatt tccaaaaacg aatgatggag ctgtttttac gtttttcaca
    23941 tagtgaaaat aaagatgtaa aaattgcgat tgtggggggg ggagcaacag gtattgagct
    24001 ttcagcggag ctttaccacg tggtgaaaaa tttaaattct tacggctttg gtaaattaaa
    24061 ccgtgccagc ttgaaagtca ctttaattga ggcaggccct cgtttgattc cggcattacc
    24121 ggagaaagtg tcggtttctg ctttccacga attgaaaaaa gcgggtgttt cggtgcgttt
    24181 aggtacgatg attaccgaag ctcgtccaga tgggctaatg acccgtttag gtgagaaaat
    24241 tgaggcggat attatggttt gggcggctgg cgtgaaagcc cctgaaatta cccgtgaatt
    24301 tggttttgaa actaaccgct tgaaccaaat tgagattaaa gacacgctac aaaccaccgt
    24361 tgatgagtca gtgtttgtca ttggcgattg tgcatcatta attcaagatg gcaagccaat
    24421 tccacccaga gcacaagcag cccaccaaat ggcaacccga tgtggtaaaa atattgtggc
    24481 attgatagaa ggaaaagaga tgaagccgtt tcgatttaac gataaaggct cactgctttc
    24541 cttctcaaaa ttcggcacgg tgggtaattt aatggggaat ttagtgagcg gtgatatgtt
    24601 tattgaaggt aaaattgccc gcttggctta cctctcgctt tatcgaatgc accaagtggc
    24661 attacacggc tgtgtcaaaa ccggcttgat tgtgttggta gggcaaatta accgtttctt
    24721 aagaccaaca atgaaactac attaaacaaa aatccgcatc aaatgatgcg gattttttat
    24781 ggcaaaataa caagcggtta ttttcttgcc tatttttgca aatactcacg cctagtttgc
    24841 taatttaatt tccgccaacc atttatcaat taagcgtttg ccctcttcgc tggaacctgc
    24901 tttttggtaa tcaatttcca caaagtctaa cgcttcggct ttggttgatt gtggagcaac
    24961 ttcggcgttg atgtttgttg gggtttggta aacaccgtgt tttttccaag gaatttcctg
    25021 tgcttctttt gaaagcaccc aatccataaa gagtttggcg ttatctaaat tacgggcatt
    25081 tttgataatg ctgacaccgc ctaacgcata gcccacttta ccttccggaa taatggcttc
    25141 aataggcgca cctttttctt tttcagtggc ataactatgt acaaagccta ccgtaaccgc
    25201 actttcacca cgagcaagat tgctggtgac tagggtgctt ttcacatatt gcgaaacgtt
    25261 attgttgagt tttttcagat aatcaaaggt tttctcttcg ccccataagg ttgaaagagt
    25321 ggtcataaac gtataagtcg tgccggagct acgaggatca ggcagttgta cttcaccttt
    25381 taagcgagga tctgataaat cttcccattt tttcggtgcc tcaatgccta gtttggcgag
    25441 tttttcggta ttcacgccta accctaatac aagcatataa acgatagagg taaatttacc
    25501 ttgttcactt tcaactaagg atttaaattg tggcagaatt tcagcttgtt ttggtgaacg
    25561 gtaggcttcc agtaagccta attcgcctgc ttgaaagtga ggttcaatcg tgccgccata
    25621 ccaaatatct gcctgagggt tcgatgcttc cgcttttact tttccgaaaa ttgtaccggt
    25681 tccgccgtga atgaatttag tttcgacatt atatttgtgt gaaaattgct tggtcatttc
    25741 ttcacaaaca ttattttgta ccgagcaata aacagttaaa cgaccttctg cttgtgctgc
    25801 ttgagctgat aagaaaatgc cagaggcgat taagatcgat tttaatgaga ttaatttgag
    25861 tacgttcatc actttcctga aaacataaaa taaaaggtag tgaagtctag catttcaaag
    25921 cgctggttga aaatagttaa ttgcaatgaa gtagggcaat tgtgcctatt actttaatat
    25981 ttaccaacta tttgcaagtt ttagcaaaaa ataaccgctt gtagtagctc ttgctatttt
    26041 gtcaaaattc agaataataa atgcctttag tctaatgtta aattttagtt atggaaaata
    26101 gttggaaata tgcttttaaa ttaatcacgc cgatttttat gggctatttt gcggcagggg
    26161 ttgcttacgg aatgcttgcc accaatgccg gaatgcctgc gtggtttacg attgtaatga
    26221 gttttaccgt ggtatcgggg acggcacaat atgcagcgat tccatttttt gtctccggtg
    26281 ttggggcggt gtcggtcttt ctcagtacgc ttttaatgag tctacgtttt agtttttaca
    26341 ccttaaatat gatggagcat aagccgatat ccaaagcgaa aagtctggtc gctattgcag
    26401 gtttaactga tgaaggcttt gcggtgttat cttcattacc gaaagagcaa aagcaagcat
    26461 tattctttaa aatcgctgtg ctatgtgtgg cttattggac attttccacg attgtcggtg
    26521 tgttgttagg cgattcagtg gcgaactata ttccgcattt ggattttgct ctgccttgtt
    26581 tgtttgcaat tttagcctat gagcaataca aaaaccaaaa acaatggaaa ccgattgtga
    26641 ttgcgttaat cggattttta cttgctcgtc agattaccga aaccagcgtg ttattggtgg
    26701 caattttagt agcgattgtc attgtggctt tattacctca atcttcttca atcaaactag
    26761 agaaaggagt agaaaatgag cacaaatgat actttgataa tgtttgcagc attagtgctc
    26821 ggctcgcaaa tttgtcgttt tttgccggaa tttttaccga aaaaggtgtt atcttcgccc
    26881 attttgcaaa aattaaacaa aatgttaccg cttgtgatta tgcttttatt gcttttaacg
    26941 agcctaaact ttcctaaaaa cggggaaggc tttaacttaa tattggcaca aattctggct
    27001 ttaataggcg tattaggtag ctatgtttgg cttaaaaata cctttttaag cgtagcgttg
    27061 gggattttcg gtgtgaatgt atttttatcc ctgttaggat aaataccaaa ggtcatttta
    27121 taggagcgaa acaccttcgc tcaatcatta acagatgtgg ggcgaaaaat ttttcgcccc
    27181 ttatttatca caagcggtct ttttctttca attttttgca aattaaatcg ctaaatcaaa
    27241 cgcatagaag gcaactaaaa taatcgcaat aattactgta cctaggttta atttattggc
    27301 ttcgcctgaa attaagcgac caatcacaag ggtggcgaaa cctagcataa tgcctgtcac
    27361 aatgttggcg gttaatacga tgaacaccgc acagactaaa cctgacattg cacctacaaa
    27421 atcgctgaaa tctaatttag agacattact tagcattaat aagcccacat acattaatgc
    27481 cggtgcggtg gcatagcttg gtactaagaa tgcaagaggt tggaagaaca gcataaataa
    27541 gaaaccgata ccaaccacta cagcggttaa acctgtttta ccgccaacgg ctgtacctgc
    27601 tgccgattca atatacactg ccgctggtgc tgtaccaaat aagcccgata aaattgatcc
    27661 gaatgagtca gaagttaggg ctttatcgcc attgataatt tgtccgtctt tatctaataa
    27721 accggcttgc cctgcaaccg cacggatagt acctgttgca tcaaaaatag cggtcattac
    27781 taacgcaaac actaccggta aaatggcggt atttaatgct cccataatat caagatttag
    27841 gaattgcgaa ttttcaccaa aactcggcat tttgaaaaag cctgtgtatt ttacgttagg
    27901 gtcaaaaatt aaacctacga tggtaatagc aataatgacc cataaaatac tgccttttac
    27961 tttcagcttt tctaacccga taatggcggc tagaccgatt aatgacacta aaaccggaaa
    28021 tgaagtgaag tcccctaatt taaccggaat atccataccg ctattgacca ctaatttaac
    28081 gttagtggcg gcaataatca gtaagaataa accaatacca attccagcac cgtgggcaat
    28141 gctgcttggc aaattacgta aaatccaagt acgaataccg gtagcagaaa tcaaggtaaa
    28201 tactacgccc attaagaaaa tcgccccgag tgcaacagga atagaaactt gttgccctaa
    28261 tactaagcta aaggcagtaa aagcagtaag tgaaatcgca caaccgattg ccattggggc
    28321 atttgcccat aaaccgatta agatagagcc gagacctgaa actaaacagg tggcaataaa
    28381 taccgattcg gcaggaaagc ctgcttggct tagcattccc ggcacaacga tgacggaata
    28441 aaccatggct aaaaaggtag ttaaaccggc gatgatttct tgacgagcgt ttgaaccacg
    28501 ctcctcaaat ttaaataacg acataagaac ctcaaaagaa gaaaatgaaa ggggaaattt
    28561 taggatgcgg aattttacag aaatttaaaa taattagcaa acgtttgcgt aaaaagtgaa
    28621 agaaaagcag gaataaatcc tgcttttgtt tgatggttag taatcgatga aagcgtcttg
    28681 atctgcccct tccttttcaa ctttaggctg aaccatatgt tcacgtttta gcccaagttg
    28741 tagtgccaca ccaattgcaa tgtagatgga tgaataagta ccgaaaccga taccgatcaa
    28801 taatgcaagt gagaaactat gaagcgttgg accacctaga tagaataagg ctagtaccac
    28861 aaagagggtg gttactgatg tcattaaagt acgcgaaagt gtttggctca aggaaatatc
    28921 gataatttca attgagctgg agcgacgaac tttagaaaag ttttcacgta cacggtcaaa
    28981 caccacaatt gagtcattta acgagtaacc gacaacagat aaaatcgctg ctacaaaggt
    29041 caagtcaatt tcaatctgta agaaagagaa gattccgatc gtcactaata catcgtgaaa
    29101 taaagccaca ataccgccta ccgctaaacg ccactcaaaa cgtgttccca cgtaaataag
    29161 tagcatagca agtgttgcca aagtggcata aatagcccct tgggttagct cttcccccac
    29221 gtttgggcca acgaattcaa tgctcttgat agtcgcattc ggatctaatt tttgatggat
    29281 catctccatc actttattcc caacagacat atcaccggca ctggcggcaa gtcggatcat
    29341 taaatctttt tgactgcctg tggtttgcac taaggcattg ccgtagccgc tattttcaag
    29401 ctccgtacgc agttttgcta aatcagcagg ttgtgaaaat tgagtttcga ttactgtccc
    29461 gccggtaaaa tctaaccccc agttaaagcc ttttgtcgca atagtaaaaa tgcataaagc
    29521 agttacaatc agcgaaaaaa tgaatccgac atagcggtat ttcataaagg ggattaattt
    29581 ataaggcagt ttaatttctg ctacatcttg ttgtacattt tcaatagcca tttttccacc
    29641 ttaaatccaa agtttcttca cgcgtttgcc accgtaaacc cagtttacaa gcattcgagt
    29701 acctgtaatt gcggtaaaca tagaaataat tacccctaat gcaagcgtta ccgcaaagcc
    29761 ttttaccgga cctgtaccta caccataaag cacaagagaa gtcaaaatag tggtgaggtt
    29821 ggagtcaaaa atacttgaga atgcgccatt ataaccttcg tggattgctt gttgaattgg
    29881 gcgaccgtta cgaatctctt ctttgatccg ctcgtagatt agtacgttgg catcaactga
    29941 catacccaca gcaagtacga taccggcaat tcccggcata gtaagggttg caccgattaa
    30001 tgacattaaa ccaatcgtta agatcatatt cacaatcaag gcaagagagg caaatatacc
    30061 aaatacttta taaaaggcta gacagaacag gatcgttaag cctaagccta aaatactagc
    30121 ttccatacct tgtttaacat tatctgcccc aagagaagca ccgatagtac gctcttccac
    30181 aatcacgatt ggagcaatca acgcacctga acgtaataat accgcaaggt tttgagcttc
    30241 cgctggtgaa ttaatccctg taatctggaa ttgattacct aaacgggttt gaatggttgc
    30301 aacgttaatt acctcttggt gtttttctaa aatgacttta ccgttagcat ctttacgacc
    30361 tgaatcttta aattcggtat aaagtgttgc catcggtttt tggattgcca ttttagtaat
    30421 ttcacccatc atctcgccgc cttcggtatc gagtcggata ctcacttgcg gcaagccacg
    30481 ctcatcagtg cctgaggttg catcaataat atgttcaccc cctaacgaag gtttacggcg
    30541 taatacaact ggctcgccat cacgggtgtt ttgcagtcct gaatcagccg gcacaatgcc
    30601 tttcgccgca gaggccacat tggcttcggt attgactaac cggaactcaa gggttgcagt
    30661 tgcccctaaa agctctttgg cacgagcggt atcttgcaca cccggtaatt caactacgat
    30721 acgatctgca ccttgacgct gaatggtcgg ctcagaaacg cccaattcct caacacgttt
    30781 acgcaaaata gaaaggtttt gttcgattgc catcgtgcga gattcagaaa gagcttgtgc
    30841 tgatggcgtt aaggtgactt tattatcatt taccaaaata tcaagcgttg ggtgagagag
    30901 acgcactaaa cgcactgctt tttcggcggt atcgttatcg gcaaattcaa cctcagttgc
    30961 aaaattttcg ccttttttga ccgcttgata ttgcaatttt tctttacgga aatcactacg
    31021 caggctgtct tgcaaagtgt cttgttgttt tgcaagcgcc gtgttcatat ccacttccat
    31081 taagaaacga acaccgccaa gcaagtccaa gcctcgcttc atcgggctac cgccaatgtc
    31141 agacaaccac tgtggcgttg ctggtgcaag gtttaaggca acagagtagt tattccccaa
    31201 tgcttctgag attttttctt tggcaggcaa ttgctgttcg ctgctttcga gacgaaccaa
    31261 aatcgagcca ttttctaaca cggcagattt cggctgaata ttcattgctg aaagtgtgga
    31321 ttgcacttga gacagtgtct caggtgtggc ttgttgccca cgagtaccgg aaatttgtac
    31381 cgaaggatca tcgccatata aatttggaag ggcatataaa gcaccaatgg cgatcacgaa
    31441 gatcaccatt aaattcttcc atagagggaa acggtttaac acaataactc cccgaatgtt
    31501 aaagttggat aagagggttg attaaagtga ttttaatgaa ccttttggta acaccgcaac
    31561 aacgaaatca cgtttgatgg tcacttcagt tgtgtcattt aatgcaatca cgatgttatc
    31621 gttatcagcg gtcactttgg taattttacc gattaaacca ccgctggtta atacttcatc
    31681 gccttttgtc aagcttgcca gtaaatcacg ttgttgtttt tggcgttttg cctgaggacg
    31741 ataaatcata aaatagaaaa ttgcaccgaa aataatcagg ataaagatca tttccattcc
    31801 gccaccttgt tgcataaaaa ctccttaaat gtttgagtgg tataaaaata agtgttataa
    31861 aaaacgcctg ttaaaatacc ataaattcaa tgaattaacg agtagaaaaa ttcatcgaat
    31921 gcttttcttt taaacaaaaa tttgagtaga atcagcactt ttagtttagg attaggttct
    31981 tggcgtgttc ttgcgctgac acaataggag aaaaaatgaa aaaattattc gctcaagcgg
    32041 ttatttttgg ggcttttttt gcaagttccg cttttgctca caatgtgcaa ttaaatcaag
    32101 cattacctgc tgtttcggtt gcaaaagacg gggaattggc agtggcaggt ggaaaggtta
    32161 gctataaaaa ttggcattca tcatctctgg caggtaaagt ccgtgttatt catcattttg
    32221 ccggtagaag ttcggtgaaa gaaaaaaatg aagatttgat gacagcaatt aaaaatgccg
    32281 gttttgatcg ctcgaaatac caaacggtga cgattgtaaa tgctgatgat gcgattgtcg
    32341 gcacaggggt atttgtgaaa aatagtgtgg aaaacggcaa acttgacaat cctcacagcc
    32401 aagtagtgtt agaccagcaa ggcagtgtga aaaaagcgtg gggcttaaaa gagaaagaga
    32461 gctttattgc agtgctggat aaatcgggta aggtacaatt tacctctgag ggcaaactct
    32521 ctgcaaaaca gattcaagaa gtgattgggt tggtgaaaac attaacgcaa taaccagtgt
    32581 ttttatgggc ggattttgta tccgcccatc attctagata ataaatcgat aacttatcgt
    32641 gtgatgatac tcttctcctg cttttgttat cccgccaaat tggagtaatt caggctggtt
    32701 tagtgaattt gggaaaaact caggctctaa tgctacacca gcgtaatctt catattcgcc
    32761 tttagtcaaa ttaggttgtc cttttagcca gttgccggtg taaagttgta atgctggcat
    32821 ggaggtgcgg agttccattt ttaagtcttc cacggctaaa caagcggtcg gattttcact
    32881 attttttgca agatgaaagg agtgatcgta accttttacc gctttttggt cgtcatcagc
    32941 caataaatct tgcccaattt ttttagcatt gcggaagtca aaactggtac tctccacttt
    33001 tttcagtgga gcattaggaa taccgctggc atcaaccggt aagtatccgt ctgcattaat
    33061 tatcagctcg tgatctaaaa tcgtctctga accttgcaaa ttaaaatagg cgtgattagt
    33121 taagcaaagc ggtgtatctt ggttagcaac ggcatcaaag ctgatttgaa gctcattctc
    33181 tgttaagcga tactccacaa aagctttcac ttcgccgcca aatccttcct cgccatctgc
    33241 aaaaaaataa ctaaatttga ccgcttgttc gctttggctt tcaagttgcc acactatttt
    33301 atctgcccca agctcgccac cgtggagatt atgttcaccg ttatttttag cgagctggta
    33361 ggttttgccg tttaagcgat attcggcatt ggcaatgcgg ttagcgtaac gcccaatggt
    33421 cgctccaaag aaagcggtct gtttttgcca attttttgca gacgtggtga ctaatacttc
    33481 ccgttcctcg ttcggcattt tgacaatgca cgaaagccaa gaagccccaa catcagaaag
    33541 ggtaatgcgt aaaaacgcat tttcaagggt gaataatttc atcggttgac cttaattacc
    33601 tagcacggca tagccgtact aggttaagca taattcagcc ctgctagggc tgaggttatt
    33661 tattttagag tagcggagct acttccttat gcttaacccg gtacgcttta gcgtgccggg
    33721 cattctcgca ccccatcgga ggcagtacaa acgtggaagg tttctttaat gccggtttgc
    33781 ttttcgtaat tgttagcaac ggcttggcgg agatcttcca ctttgtcatt tggcactagg
    33841 cacacgacac aaccgccaaa gccgccgcca gtcattctgg ctccgccgtt tttaccgata
    33901 gcttgttggg cgatttcggc taagcaatcc acttcagggc aggtgatttc aaaatcatca
    33961 cgcattgagt cgtgagattg agccatcaac tccccgagtt tgaccatatc attcgctttt
    34021 aaggcctcta ctgcttccag aactcgttga ttttcgctga tgatatgttt tgctcgttta
    34081 tacgccagct cattctcttc actaagttct gaggctcgtt caataaattg ttccgctgtg
    34141 acatcacgca attttgcttt gccgaagaag tgggcggcaa attcgcactg ttcacggcga
    34201 ctgttgtatt cgccggtaac caagtcgtgt tttacgttgg agttaataat cgcaatcgaa
    34261 tagccttgtg gcacaggggt tggggtgatt tctaaactac ggcagtcgat catcactaaa
    34321 tgatcttgtt gcccgagagc ggaggtgagc tgatccatat tgccgcagtt gcagccgaca
    34381 aatttattct cagcctcttg cccgattaat gcgatttgcg gtaaagaaag cggtaaatcg
    34441 ccgagtaatt gagcggtttt accaatcgac acttccaatg cggcggaaga acttaaacct
    34501 gatgacatcg gcacatcgct ggtaatggct aaatctgctc cttgtttgaa ttcggggtgt
    34561 ttggcttgaa taaatttcac cacgccacgc acataattcg cccatttttg ctcgcttggc
    34621 tcaatcgcct ggcttaaatc aaattcatct tgttggttga gatcaatggc gaacacccgc
    34681 catttgttgt cactacgttt ggcaaagcta accgctgtgc cgtaattgat ggcacaaggc
    34741 attacaaacc catcgttgta atcagtatgt tcgccgataa tattcactct gcccggggca
    34801 aataccgtgc gttctgcttt ataaccaaaa tgttgttcaa attgttgcaa agcgatttct
    34861 tgtggtttca tttcaattcc ttatttatct ttatagtgtt tggtatcact tactgcattt
    34921 aaacgttcgg cagcttgttc cggggttaaa tcacgttggc tttctgccat catttcataa
    34981 ccgaccataa atttacgcac tgttgccgaa cgcaagagcg gcggatagaa gtgagcgtgt
    35041 aattgccagt gagcattttc cttgccgtta aacggagcga agtgaaagcc cattgaataa
    35101 ggaaagctga tgttaaacag attgtcgtaa cgggtggtga gctttttcaa tgcaagggct
    35161 aaatccgctt tttccgcttc gtttaaatcg gtaatggatt tgaactgctt ggctttcggc
    35221 aacagcaagg tttcaaacgg ccaagccgcc cagtaaggca caaccgcaat ccaatcttcg
    35281 gtttctgcca caattcgctc ttgtttgtct aattcacgtt gtgcgtagtc aagcaacagt
    35341 ggcgagccat attgagcaaa atatttcgct tggcattcgt cttcaatcgc aatttcatta
    35401 ggtagaaaat tacttgccca aatttgcccg tgtgggtgag ggttagaaca ccccatcatt
    35461 gagcctttgt tctcaaaaat ttgcacccac tgataatgct ctttcagctc attcgcttgc
    35521 tcttgccaaa ctgttaccac atcagtaatt tcctcgatgg aaagttgcgg taaggtttta
    35581 ctatgatcag gcgaaaaaca gatcacacgg ctttcgcctt gtgtatgaga aatctgaaac
    35641 agcggatcat cattcggtat tggtgccggt gtgtctggta gcagggcaga gaagtcgttt
    35701 ttaaacacaa acggcttggt gtaattcggg ttttgttcgc cggtaatccg cttattgccg
    35761 gggcagaggt aacaacttgg gtcgtagctc ggtttttcat cttgcacgat ttcttcttgt
    35821 tgcccttgcc acgggcgttt tgcccgatgc ggagagacta aaatccattg attttttaat
    35881 ggattaaaac gacgatgtgg gtgatcgttg aggacaaatt cgctcatata aaactcctcg
    35941 aaattagtta tgtaaagagt atagcgaaag tcagacaaaa tgactgtgac atagctcaca
    36001 aaataatgat gtcaagcggt caaatttcag aaaaattttg caagttttcc tccattttgc
    36061 gatttaaggt agcttacgtg gaattgaatg tggcttttgg tagaatagat gaatatgcaa
    36121 gatattaaga caaaaataga tggaaagact gaataaattt gatgcttggt taatgaatca
    36181 taaacctaat gctaggttaa gcggagcgag tcgtttgttg acagagtttt ggttctttgg
    36241 gttaaaagaa gctagagcct gtttatttgc gggattattt tttattgcga tgttttcggt
    36301 accaaaaacg ggattatggg gcttacctcg ttatgatatt ttgctgattt ttgccatagt
    36361 ggtgcaaatt gcaatggtga aactggggct ggaaacgtgg gacgagctaa aagcaataag
    36421 cctatttcat ttggttggtt ttgtgttaga agtctttaaa acatcgagta atattcaatc
    36481 ttgggcatat ccggattttg cctatactaa attgttcaat gtgccattat ttactggttt
    36541 tatgtatgca gcagttggtt cttacattat ccaagcgtgg cggttgtttg atttgaaaat
    36601 taaaagccac ctgccctatt ggttagccac tttaacggca ctgatgattt acctgaattt
    36661 ctttacgcat cattacattg gggattaccg ttggtatatt gccgcttttg cattagggct
    36721 gtatgcacgt acttttgtat ttttcacccc ttatgacatt acacgaaaaa tgccactgct
    36781 gctttctttc ttcctgatag gttttttcat ttggttggcg gaaaatatcg gtacgtttgc
    36841 cggaatttgg cgctacccga atcagtttgg ggcttggtct atggtgcata tgagcaagtg
    36901 gagtgcttgg gcgttattgg tgatgatgac ttttaccatc attgtgcatt taaagcatat
    36961 caagcaaaca gtcagagtct cgagcgatta acaagctgtg ggttttggcg aaaattttac
    37021 tcatcagtta ttttcagtgg aattaggggc aaataataat ttgcccctat atcaaattat
    37081 ggattttccc cttccacatc aataatcatc acttccgact gtgagcctaa ccgcatcggc
    37141 acgccccaga atccgtagcc ggaggtgaca aaataatgcc cgaagccgat tttttcatag
    37201 ccgtaatgta atcgatagat cagtttggta ataatacttg cagggaacac ttgccctttg
    37261 tgagcgtgtc ctgaaacttg aatatcaatc ggcaatttag catgttgctc aatttcagtc
    37321 gggcggtggt caagcaaaat taccggtagt ttagtgttca cgttttgtaa aagctgttcg
    37381 gcagaaggtc gatttttgac taaatcatca ttacgcccaa taagggtaaa ttttccgtta
    37441 atttcggccg tttgatccca taaaacagta ataccggcgt cggtaatttc ttttgcaatc
    37501 gtttcttgag ccccaaaaaa gtcgtgattg ccaagggtag catacacgcc aagaggagct
    37561 tttaatttgg ctaaatgagg ctgcatttta tcggcaacat aaacttcggt attgtcgtcc
    37621 ataatatcgc ccggcaataa aatcagatcg actttttgct ggttgaaaat ctctgccagt
    37681 tggtcaagtt gcttggttcc gaacagtttt cctaaatgca gatcgcttgc cataccaatg
    37741 cgaagcggtt tctctaatgg tttatccaat ttcaccgaat aatgtactac tgttggggta
    37801 taagcgttgt aatagccaag cccaagtaag ccaaagaatg caaatgggta ggcgattttc
    37861 agccagcgat tgacggtagt attgccgttg aatattttgt aaatacaagc ggtgaaaaaa
    37921 ctgataaaaa atgcaaaaag taacaatacc aatatgaatg ccattattct aaatagcgca
    37981 aaagtacgag taagatgcaa aatcactaat ccgtttgcga ctaagaaagt gagaatacca
    38041 actgttttac ggtttttact tgataaatta aataaccagc tgacagtctt tgcaaagttg
    38101 aataaaaaga gttgtaacac cgcaatcaca agggcggtgg taatgtagta acgatattcc
    38161 atatttttcc ttcaataaat tggctaaacc cagccgattt gtcttaataa aaataagccg
    38221 atgctggcac taaacattga gccgagagtc gtaatgccga tcagatttgc ggctgcctcg
    38281 ccgtctccgc catagttgcg tgtcattgcg taggtggctg aagcaacggg agcagaagca
    38341 gccacaaaga caatgcctag ttccatcggc ggaagttgaa acacaaattt cccgagtagt
    38401 agcaagaaaa ttggagcaaa aatcagccga atcgaggcag aaaacagcac aattttattg
    38461 atggtgcttt ccactccttg attaaattgt ttcaactgtt tgaaattaat gcttgctccg
    38521 gtgcagataa gtgctaatgg tagtgtcagg ctcgccatta atttaccagc agactcaagc
    38581 ggggttggaa tttggtggct taattcaaaa tagttaaaag ttaagcctgc aatgacggct
    38641 agaatcagcg gatttctcaa tatcgacaat attaatctgc caaaattcac ttttttctcg
    38701 cttaacgatg aagtgagggt aatcactgca agcacattaa aggtaatcac caagcacgaa
    38761 atataaactg aagcggcagc gagagcttta tcgccataag cattgagaat taaggcaatg
    38821 cctaaaatcg ccgcattggt acggaaagtg ccttgagtga aaatacaacg ataacggcgg
    38881 ttttcaatat gtcgagccgc ccaccattcc gcccataaat agatcaaaat cgaaccgccg
    38941 actccggtcg agatcaggtt gatttggctg gagaaatcta acgggctttt tagcatattc
    39001 aagaaaatca tcggtggcag ggtaaaatta aataccacct ttgatgccat attgcaaaag
    39061 gtatcgtcaa taaattttcg tctgcgtgga aaaataccga acagcattaa caaaatggtt
    39121 ggtaaggtaa cgccaatgct aaattggata gagtcgaaaa gcataatgtt tgccttaaat
    39181 gatggcacga gtgtcttttg cttgtaccgt agattatcaa taaagtacca gcgtggacgc
    39241 tggtactatc atcaatggaa atgaaattac aatcctgcct ttaagcttgc ttcgacaaat
    39301 ttatccaaat caccgtccag cacttgttgg gtggtgcgat gttccacacc ggtacggtgg
    39361 tctttaatcc gtgaatcgtc tagcacataa gagcggatct ggctgcccca gccgatgtcg
    39421 gatttgttgt cttccatcgc ctgtttttcc gcatttttct tgctcatttc cagctcatat
    39481 agcttcgctt taagctgttt catcgcctga tctttatttt gatgttgtga acgaccgttc
    39541 tggcactgca ccacaatgcc gctcggtata tgggtaattc gcaccgccga ttcggtttta
    39601 ttgacgtgct gaccacccgc ccctgaggca cgatacacat caatccgcaa atccgcaggg
    39661 ttgatttcaa tatcaatatc gtcatcgact tccggataaa cgaaagccgc cgagaacgag
    39721 gtatgacgac cgttattggc atcaaacggg cttttacgca ccaagcggtg aatacccgtt
    39781 tcggttctga accagccgta agcatagtcg ccggaaattt tcacggtggc ggatttaatc
    39841 cctgccacat caccgtctga ggcttccatt agttcggctt taaacccttt gctctctgcc
    39901 caacgcaaat acatacgcag taacatttct gtccagtcct gagcttccgt tccacccgaa
    39961 ccggcttgca aatccaaata gcaatcggca ctgtcgtgtg ggccgctgaa catccgctta
    40021 aattctaaat cggcaagttt tttctctaat tcgtctgctt ccacttgggc ttcattgaag
    40081 gtatcctgat cttctgcttc caccgccagc tcaatcaacc cttcaacatc ttcaatccct
    40141 tgctctaagg ctttaatcgt attgacgatc tgctccaaca ttgcccgctc tttaccaagc
    40201 gcttgtgctt tttccggctt gttccataca tcgggttgtt ccagctcggc attgacctct
    40261 tctaagcgtt cgactttatg ctcaaagtca aagatacccc ctgatcaccg cggtgcgctc
    40321 gcttaaatca gttagttggt ttttaattgg gtttaattca aacattgtcg ttcctgtttt
    40381 tgcttatttt aaaaagatga attatagctg aagttaagca agcggtcgaa ttttgcaaga
    40441 aatggagcaa tgatcgtttc tagtaatgag atttggttca taaaagttgc aactgtttct
    40501 gctatttggc tttgatagct aaaaatcttt aaaaaaacaa gcggtcgttt taccccattt
    40561 tttgcaaaac gaccgtagct tcttgctata atcgctgaaa aaatgctgca aggagatttt
    40621 atggcaaagc gcccaagtga tattgatgca accctattgc aactggaaat cctacgccgt
    40681 atccccaaat tacccgctaa aattgatgct aaaagtttgc accaacagct attagatgcc
    40741 ggctttgaac gggatattcg cactgttcag cgttcgctca aaatgttatg cgagcatttt
    40801 gatattgaat gcgatgagcg gagcaaaccc tttggttata gctggaaaat ccgctcagag
    40861 gggctggcat tgccgattct caacgaacaa caatcattac tgctaaaact tgccgagcaa
    40921 cagctgaaat atctgttacc cgcaaattta atggcatcaa tgaaaccctt ttttgagcag
    40981 gcagacagaa tggtttccgg ggcgaaagac aagcccgaat accaatggct aaataaagtt
    41041 tgctccacgc caaccagcct accgctgatc cctgcaaaaa ttaaagaaga gatttttaat
    41101 tccgtaagcc aagccttatt tcaaaataag ttgttaaaga tcgaatatca gaaccagcac
    41161 ggcaaaaaac accaagcgac aattatgccg ttggcgattt cacaacaagg tgcgagcatt
    41221 tatttggtct gccgttacga agggtttgac gacaaccgcc tgttggctct tcaccgcatt
    41281 cgtaaagcgg agatttctac ttttagtttt gaacgcccga aagattttaa tttgcaagcc
    41341 taccaagatg ccggacacct cggttttggc aatggcgaaa aagctagcct taccttttcg
    41401 attagcagag acgccggttt ccatttaacc gaaacaccgc ttgccaaaga tcaaaaaatt
    41461 ctcgaggaga gtgaaactca ctaccgtatt caagccatag tcgctgataa tgatatgcta
    41521 acctggtagc tacgcaaatt tggcgaagat atttgggata tcgagaaaga agcgctaaaa
    41581 taagctaaac aagcggtcgg ttttgtggga atttttgcta aatagtatcg accgctcctc
    41641 cctaaacaga cctttatcat aaatacaact ctttcaatca gatattctta ctgtctattg
    41701 atgaacgatt cgaatttttc tagtggttga aatttaaact aattttcttg ctttttggca
    41761 tttttcagac ttttaattct ctccattagc ctgttttttt acgctctttt tcataaacag
    41821 gaataaccaa tgccttttca acttactttc tgccaacaag ccggcaatca gcaccagaaa
    41881 aatcaagatg cactgtttaa cggcaaagcg gtgtaccaat ggcaacttaa aaatgccgag
    41941 agttatctgc tggataacga caaagtaatt tttggggttg cggacggcgt ttccagccac
    42001 cctcgaaatc atcttgcctc acattattta atggcgttac tcagccaatg ccaatccctt
    42061 gatagccaat ggttgcgaca ggctcacggc gatttttgcg aaaaattagc gaaagattat
    42121 tttggtgctt cttgcacttt tgttgcttgt gaattacacc ataacggcag agggcgtatg
    42181 gttaatgtgg gcgacagtcg agcctataaa attacggcaa acggggagtg gcaacaactg
    42241 agttttgatc acaccatact ggctgaaatg aaacagaaag gcttggttaa ggaagggagc
    42301 aactatgcct caatgtataa cggcttaacc gattgtattg ttgccgattt tgacgccgat
    42361 gatttccgca ttcatatagc cgaatttcaa ctggaaaaag gcgagagcat tttgctctgt
    42421 tctgacggtt tgcacgaaca actcgcccca gaagctattc aggcgattta ggacggatac
    42481 gaaagcccgt ctcatcgtct gcaaatttgc agaaaaatgg taaaaatgca ccgcttgtat
    42541 gacgattttt ctgcggtgat ttgtgaaatt gtgtaattaa aacgacatta tttgtcgcat
    42601 tggtgcttaa aatccgcata aaacagagga gaaaaaaatg aaaaacgatt tccattatgc
    42661 cgctgaatta atccgcaatg cagacggcat tttaattacc gcaggggctg gaatgtcggt
    42721 ggacagtggc ttgcccgatt tccgtagcgt gggagggtta tggaattcct acccaccgct
    42781 caaaaaattt aatttgcaat ttatgcagat tgccacaccg cttgcctatc aggaacgccc
    42841 tga
//
LOCUS       DANLTI010000005        40477 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.005, whole genome shotgun sequence.
ACCESSION   DANLTI010000005 DANLTI010000000
VERSION     DANLTI010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 40477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40477
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.005"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            202..1308
                     /gene="mltA"
                     /locus_tag="PXB09_000218"
     CDS             202..1308
                     /gene="mltA"
                     /locus_tag="PXB09_000218"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDL5232376.1"
                     /translation="MNWKAYKKAIAAASVVAIATVLVACSSSGQKGKTTSYDAEKAKF
                     GAKYNGRHFMPYGTHFQAGRLGLNAAPVNQLDFLQQLSNVRAYSSLADSYAIAYGKIS
                     RWISSGGNINDLAKYGISTRLMRGEDGYQNVLMTGYYSPVIKARRTPQGQYQHPIYAM
                     PSSKRFSRAEIYAGALQGQGLELAYSNSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQ
                     NGFKYASVGRLLVEDGEIPKEKMSVQAIREWGQRNPSRVQGLLERNPSYVFFKNDPTG
                     QVKGSAGVPLVPLASVASDRSIVPSGSVLLVEMPLIDSKGNWTGKHEMRLMVALDVGG
                     AVKGHHFDLYQGIGDKAGHIAGLMKHYGRVWVLN"
     gene            1321..1770
                     /locus_tag="PXB09_000219"
     CDS             1321..1770
                     /locus_tag="PXB09_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232377.1"
                     /translation="MLKKLSAIFLLLPSAVLANNLQNITASTEPKYKISEIDVRILIR
                     QLNNIEQCIYPELAKPGYQQIYANWNLAENLTMQYFEYQLLKELLGEENQKLMQNDTL
                     STEYFHLLHSRLNHQKANVDPEKCDTFKPRYKEIYKSMENALTKKNQ"
     gene            complement(1804..3321)
                     /gene="purF"
                     /locus_tag="PXB09_000220"
     CDS             complement(1804..3321)
                     /gene="purF"
                     /locus_tag="PXB09_000220"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5232378.1"
                     /translation="MCGIVGIIGNSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFR
                     LRKANGLVSDVFQQEHMVRLQGNVGIGHVRYPTAGSSSVSEAQPFYVNSPFGITLVHN
                     GNLTNNAELKARLYNEARRHVNTNSDSESLLNIFAYFLDLYSTQHLSPDNIFETVRKT
                     NDSIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKREIEGKTEYMFASESVALDVVGF
                     EFVRDVLPGEAIYVTFDGQLHSQICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARV
                     HMGELLGEKIKREWGRIIDDIDVVIPIPETSNDIAVRIANMLYKPYRQGFVKNRYVAR
                     TFIMPGQAQRKSSVRRKLNAIASEFKGKSVLLVDDSIVRGTTSEQIVEMARAAGAKRV
                     YFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAQMIGVDKLIFQDLEALYKSIQL
                     ENPTIHRFDDSVFTGEYITGDVDKCYLDSIARSRNDKAKAEAAKQATNLEIHNER"
     gene            complement(3336..3839)
                     /locus_tag="PXB09_000221"
     CDS             complement(3336..3839)
                     /locus_tag="PXB09_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDL5232379.1"
                     /translation="MVDLIVIGIIAFSVLISLWRGFTNEALSLLGWVIAFFVASSFYP
                     YLSGYLTQINSVYLQNSEFLRNGIAAAILFILTLIVCGVINGLLGKVIDLSGMSITDR
                     ILGGAFGALRGILIVSAILFFLDTFTQASQTELWKSSLLIPHFDFIVKWFFEQLQANS
                     SFLNTTK"
     gene            complement(3985..4446)
                     /gene="rnhA"
                     /locus_tag="PXB09_000222"
     CDS             complement(3985..4446)
                     /gene="rnhA"
                     /locus_tag="PXB09_000222"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDL5232380.1"
                     /translation="MKLVEIFTDGSCLGNPGKGGIGILLRYNGYEKTVSKGYFQTTNN
                     RMELRAVIEALAMLKEPCKVQLNSDSQYMKNGIQKWIFNWKKNDWKTSDKKPVKNKDL
                     WVALDQEIQRHQIEWSWVKGHSGHRENEICDELAKQGANNPTLDDVGYIAD"
     gene            complement(4539..5870)
                     /gene="argG"
                     /locus_tag="PXB09_000223"
     CDS             complement(4539..5870)
                     /gene="argG"
                     /locus_tag="PXB09_000223"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005722481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDL5232381.1"
                     /translation="MSATILEALPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTA
                     NLGQPDEDDYNAIPKKAMEYGAENARLIDCRQQLAHEGIAAIQCGAFHISTGGIPYFN
                     TTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLD
                     QLFIDELGGRLEMSKFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIV
                     KPIMGVAFWDESVEIKAETVSVTFEEGVPVALNGKRIDDAVELIMEANRIGGRHGLGM
                     SDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQ
                     GRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEK
                     VEDAPFTPADRIGQLTMRNLDIVDTRGKLAVYTDAGLLAANNSVIPQLGKK"
     gene            6054..7094
                     /locus_tag="PXB09_000224"
     CDS             6054..7094
                     /locus_tag="PXB09_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5232382.1"
                     /translation="MKKLLVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAP
                     LAELCPSIDKIIIDTANKKDKNEFNRILQAVKNEQFDAVICFVSDWHNAKLTWQSGIK
                     YRLAPATKLFQFLYNHRLTQRRSQSAKAESEYNLDLARAFLSKHNIPIVEPHTPYLSV
                     EQQTVQAQKAKLCEQLNITTVKKWVFVHSSTGGSANNLSIEQYAELIQGILAEFDCYV
                     VLTAGKGESEKAQQLAQQINHNNVVVYDKNEGLQDFTHSLACADLFIAGSTGPLHISG
                     ALNIPTIGFYPSRLSAIPRRWKPINDANKHIAFCPPSDKASQMNLTLISISEALKTIV
                     PFIRRMWNTPSL"
     gene            complement(7159..7917)
                     /locus_tag="PXB09_000225"
     CDS             complement(7159..7917)
                     /locus_tag="PXB09_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5232383.1"
                     /translation="MPTLSVAMIVKNEAQDLRACLDTVKDWVDEIVILDSGSTDETPQ
                     IAAEYNARFYTNTDWQGFGKQRQLAQQYVTSDYVLWLDADERVTAELKQSILQAVKND
                     EKNTVYKISRLSEVFGKQIRHSGWYPDCVVRLYRTEFAKYGDELVHEKVHYPKEAKIQ
                     KLQGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKTASLFDGVTHAIGCFVKMYLL
                     KAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRK"
     gene            8044..8358
                     /gene="yhbY"
                     /locus_tag="PXB09_000226"
     CDS             8044..8358
                     /gene="yhbY"
                     /locus_tag="PXB09_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDL5232384.1"
                     /translation="MSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIDNALD
                     HHELIKVKVAGADRETKQLIIDAILRETKAAEVQTIGHILVLYRQSEEKKISLPKATK
                     AI"
     gene            8419..9141
                     /locus_tag="PXB09_000227"
     CDS             8419..9141
                     /locus_tag="PXB09_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDL5232385.1"
                     /translation="MFKKFSLYTLAMLLIPVVTWLANWHWSLAIQYAEFDFDYFLYLI
                     TETGSVPYAIITCVVFALLLARVVRKRYSLIFVITVCVASMVATQAIKTAMKSTFQEP
                     RPFVTALFQDKTDDFYQLTREQRGLAVMEKIGANQNFVTAHQAKEVGYSFPSGHTIFA
                     VSWLLLVVGFCRNMRGQAVVLAHFFAISWAALMLISRLRLGMHYPIDLFTSSLIAFLI
                     NLALFVWFVPWLESKKWFAKKP"
     gene            9210..9371
                     /locus_tag="PXB09_000228"
     CDS             9210..9371
                     /locus_tag="PXB09_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232386.1"
                     /translation="MEMSIEKIAELLSDKEKDDYPFSIEERQFAAQASADTWEAILNN
                     TIQPFDFKK"
     gene            9379..9741
                     /locus_tag="PXB09_000229"
     CDS             9379..9741
                     /locus_tag="PXB09_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232387.1"
                     /translation="MYQVFIAEPKDPNLEKGLLKHFIKSYLTQEELDFLHKILTNLPN
                     IRPFWGDTGYKYIVIDNVYFLYEVSESETKVILLGTKFNNKRKTFNFANTKTQQKSMK
                     KWINDLAIYKPHKINQSQ"
     gene            9754..10671
                     /gene="nagK"
                     /locus_tag="PXB09_000230"
     CDS             9754..10671
                     /gene="nagK"
                     /locus_tag="PXB09_000230"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDL5232388.1"
                     /translation="MAIYYGLDVGGTKIELAAFNEKLEKLHSERVPTPQTNYQDWLTA
                     IKTLVETADTKFDEKGTVGLGIPGFVNRETGIAEITNIRVADGKTILKDLAECLGREV
                     RAENDANCFALSEAWDESNKPYSTVLGLIIGTGFGGGFVFDGKIHSGRIGMAGEVGHM
                     QLNYHALKLLDWDKAPIYECGCGNQACLDTYISGRGFELLFNDLVGEKISAKAIIERF
                     YQQETKVVAFVEKYIELMAISISNLITILDPDMIVFGGGLSNFDYIYQALPKALPKHL
                     MRSAKVPVIKKAIHGDSGGTRGAAALFLK"
     gene            complement(10742..12691)
                     /locus_tag="PXB09_000231"
     CDS             complement(10742..12691)
                     /locus_tag="PXB09_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDL5232389.1"
                     /translation="MYQRSQSRTVLFPILLFVGINLVILTLSRLVLGVWQSDRVSAVD
                     GWIPLILQGIRIDISSLCWLFGLPALFSVLCFHKNVLGSIWQTVLRIWLTVGSVFILF
                     MEVATPNFIETFDLRPNRLFIEYLVHPREVFTMLINGHLWAVICGIGIAMISLIIYWK
                     LSGWATKNLHFPSWKMRPLLALLVAAIVFVGGRSSFAHRGINPAMVAFSSDPLVNSLV
                     LNSGYSVLYAVQQLKDEDKSSEQYGKMSVEEMFNIVKQVRNRPASDYISDEIPTLTQN
                     KATYQGKPKNIVIILEESLGAQFVGSLGGKNLTPNLDKLSEQGWYFTNLYATGTRSVR
                     GIEAVTAGFTPTPARSVVKLTKSQTNFFSIAELLKRQGYHTSFIYGGEKHFDNMASFF
                     YGNGFQQIIDEKDYKNPKFTATWGVSDEDLFDKANETFNQLHKSGKPFFSLVFSSSNH
                     DPFEFPDGKIELYEQPKQTRHNAAKYADYAIGHFFELAKKSEYWQDTVFLVIADHDSR
                     AVGEHLVPIQHFHIPALLLGEHIQPRTDNRLVSQLDMPTTLLSVAGISGQYPMIGYDL
                     TQDIDPNRAFMQYDATQAMMRGNDVVVMRPNLPIEGFSYDKANYKLTPKEQPESFKKE
                     ALAHALLGSYLYKNQLYKLPEETKQ"
     gene            complement(12724..13512)
                     /locus_tag="PXB09_000232"
     CDS             complement(12724..13512)
                     /locus_tag="PXB09_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDL5232390.1"
                     /translation="MQVTELNIYPIKSTQAIQVSQAFVEPKGLNFDREFMLAEPNGKF
                     ITARKDPELYRLAAFPIATGVMITHTSGQKCVALYQDFVEEQSSEVWGTHFNAKVAAE
                     AVNQWLSEIFGRAVQLRWLGSQSQRIVANFADHPMSFADSNPVSLMSLKSLEQVQQWS
                     PIPLEMARFRPNIVIDGNVAFEEEQWQQVQIGEVLFTKAALCTRCILITRDLNTLELD
                     PKSEPFRTLKEKHCDEKGKPVFGIHLVPQNSGVIKVGDPVIIQL"
     gene            13637..13867
                     /gene="xseB"
                     /locus_tag="PXB09_000233"
     CDS             13637..13867
                     /gene="xseB"
                     /locus_tag="PXB09_000233"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDL5232391.1"
                     /translation="MAKKPTQDFESTLKELEAIVTHLESGDLPLEEALNEFETAIKLV
                     QQGQERLQKAEQRIQILLNKNDTAPLSDYERE"
     gene            13873..14766
                     /gene="ispA"
                     /locus_tag="PXB09_000234"
     CDS             13873..14766
                     /gene="ispA"
                     /locus_tag="PXB09_000234"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDL5232392.1"
                     /translation="MSYLLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLL
                     GGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPT
                     CHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSL
                     DLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGL
                     AFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLE
                     QLPFDTTALKELANFIVKREN"
     gene            complement(14801..15601)
                     /locus_tag="PXB09_000235"
     CDS             complement(14801..15601)
                     /locus_tag="PXB09_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDL5232393.1"
                     /translation="MCQLLGMNCNTPTDITFSFDGFRRRGGLTDHHTDGFGIAFFEGK
                     GVRVFRDNRPGASSPMAEAISQYQIKSLNVIAHIRKATRGDVNLENTHPFIRELWGEN
                     WVFAHNGTVEGVGVCEECHYQPIGTTDSEAAFCRIVSELKEMYPAKPSEKEIFDAVVQ
                     ITSRIAEHGVFNFVLSNGHWMIARCTTNLHYVCRKAPFGKALRDDDVSIDFSQYTKIT
                     DKVTIIATQPLTKNENWTKMKNGGYVFFKDGDVVYEIEGTLPEAQPHV"
     gene            complement(15726..16511)
                     /gene="znuB"
                     /locus_tag="PXB09_000236"
     CDS             complement(15726..16511)
                     /gene="znuB"
                     /locus_tag="PXB09_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDL5232394.1"
                     /translation="MFDILFPAWLAGVLLAFITAPLGAFVVWRKMAYFGDTLSHSALL
                     GVALGIFLELDPYLAVIGMTILLALLLVWLEQKTNYSVDTVLGIIAHTSLSLGVITIS
                     LLDNVRVDLMSYLFGDLLAINFSDVVFIGIGATLICLILMLFWKRLLSITISPELAQI
                     EGLNVARLRLLLMILTALTIALSMKFVGALIITSLLIIPSATARRFAKTPEKMVLIAI
                     FFSIIAVSGGLLLSSWKDTPAGPSVVICAGLIFLLSLFKKEYH"
     gene            complement(16598..17935)
                     /locus_tag="PXB09_000237"
     CDS             complement(16598..17935)
                     /locus_tag="PXB09_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDL5232395.1"
                     /translation="MSSLSFDFSEDFRPLAAKMRPRNLAEYVGQSHLIGEGKPLRRAI
                     EAGHSHSMIFWGPPGTGKTTLAEIIAHHLDAEVERISAVTSGVKEIREVIEQAKLNRQ
                     AGRRTLLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARIYI
                     LKPLQAVEILKILQMAIADTERGLGNETLVLEDDVLALLADYVNGDARFALNCLELMV
                     DMAQDSAKGKVLNKSLLTEVLGERQARFDKGGDRYYDLISALHKSIRGSSADGALYWY
                     ARILTAGGDPLYVARRLLAIASEDIGNADPRAMQIAIVAWDCFTRVGAYEGERAIAQA
                     IIYLAVAPKSNAVYQAFNEAKRLAKEAKDYDVPAHLRNAPTQLMKSLGYGEEYRYAHN
                     EPNAYAAGENYFPPELKDTEFYFPSERGMEKQIKEKMAWLKAQDQASPIQRYK"
     gene            complement(17945..18433)
                     /gene="mreD"
                     /locus_tag="PXB09_000238"
     CDS             complement(17945..18433)
                     /gene="mreD"
                     /locus_tag="PXB09_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDL5232396.1"
                     /translation="MRTNPIFQILVIIAIFVVAFVLEIMPWPVGFQGLRPTWVVLVLI
                     YWALALPDKMSVGTAFIAGIVWDLILGSILGIHALVLSVAIYFVAKYHLILRNLSLWL
                     QSLLVMAYIVLIRFFIFVIEYILHSAEFNSQELLGAVISGVLWSWIFLLMRHIRRQLR
                     LR"
     gene            complement(18433..19488)
                     /gene="mreC"
                     /locus_tag="PXB09_000239"
     CDS             complement(18433..19488)
                     /gene="mreC"
                     /locus_tag="PXB09_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDL5232397.1"
                     /translation="MKPIFAKAPSLGMRLIIAVIFSIMLIISDGRSSLMIQARNLLET
                     AVSGLYYFANTPRSILDGVSGNFIDNNKLQLENNLLKEQLREKSADLLLLDQLKVENQ
                     RLRLLLSSPLRQDEYKKIAEVLAAEMDAYRQQVVINQGRLDGAFVGQPIIDERGVVGQ
                     VISVGEKSSRVLLLSDITHAIPVQVLRNDVRGIASGTGVNNELVIDNLPRSIDVVKGD
                     VLVTSGLGGRFPEGYPVAIVETVENDTKSQFARIVARPLASFDRLRYLLLLWPTAEEK
                     NYSQSLSPAQVREVVEERRNSVNPFERLKQMSNKKTEVQLEAKEEQIENDEINENPAA
                     QPEAENEQNYHTEEGAE"
     gene            complement(19590..20642)
                     /locus_tag="PXB09_000240"
     CDS             complement(19590..20642)
                     /locus_tag="PXB09_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDL5232398.1"
                     /translation="MFKKFLGLFSNDLSIDLGTANTLVYVKGQGIVLDEPSVVAVRQD
                     RMGSLKSIAAVGSHAKLMLGRTPKSIMAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPAGATQVERRAIKESAIGAGAREVYLIEEPMAAAIGAGLPVHEAMG
                     SMVIDIGGGTTEVAVLSLNGIVYSTSVRIGGDKLDEAIIAYVRRHFGSAIGEATAERI
                     KQEIASAKIESDDDVKTMEVHGHNLAEGAPRTFELNSRHVLEAIEQPLNGIVEAVKSV
                     LEQCPPELAADIFERGMVLTGGGALLHNLDRLLSDSTGVQVVVAEDPLTCVARGGGKA
                     LEMIDMHGGDVFSIDD"
     gene            complement(20757..21386)
                     /locus_tag="PXB09_000241"
     CDS             complement(20757..21386)
                     /locus_tag="PXB09_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDL5232399.1"
                     /translation="MDIFIQGFIVCFGLIVSIGAQNAFLLKQGILKQHIFWIALLCFL
                     GDVFLMTIGVLGLGTLIAELPVVSFIISLLGAIFLLSYGSRSFISVFKSGEYLVASGE
                     NATSLKKALLITFAITFLNPHVYIDTVVIVGSIGGKLDFNGKIYFLAGALLCSFIWFF
                     GIGYGASLLSPYFAKRRTWQILDAVTGLIMYFIAFSLLIYTYQLALQIF"
     gene            21490..22137
                     /gene="udk"
                     /locus_tag="PXB09_000242"
     CDS             21490..22137
                     /gene="udk"
                     /locus_tag="PXB09_000242"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDL5232400.1"
                     /translation="MTDTSQTSSCVVIAIAGASASGKSLIASTIYKELKNELGTDNIG
                     IISEDAYYRDQSHLTMEERIKTNYDHPNSMDHHLLVEHLRQLKQGNAIEIPEYDYTEH
                     NRKTTTKHFEPKKIIILEGILLLTDENIRNEINVSIFVDAPLDICFIRRLQRDMVERG
                     RSMESVISQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAIDILKAQIKQLLK"
     gene            22152..22733
                     /gene="dcd"
                     /locus_tag="PXB09_000243"
     CDS             22152..22733
                     /gene="dcd"
                     /locus_tag="PXB09_000243"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDL5232401.1"
                     /translation="MRLCDTDIKRYLDEGIIAITPRPSDDKISGATADVRLGNSFRVF
                     REHKTPYIDLSGPREEVAAQLNKVMSDEIIIGDDEAFFLHPGDLALATTLESVSLPAN
                     IVGWLDGRSSLARLGLMVHVTAHRIDPGWEGKIVLEFFNAGKLPLALRPNMAIGALSF
                     EILSGDAAKPYNARKDAKYKNQQSAISSRINQD"
     gene            22811..22966
                     /locus_tag="PXB09_000244"
     CDS             22811..22966
                     /locus_tag="PXB09_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDL5232402.1"
                     /translation="MLHYAVVFFVIAIIAALLGFGGIAGSATEIAKILFFVFLILTVI
                     SFFFKKK"
     gene            complement(23095..23697)
                     /locus_tag="PXB09_000245"
     CDS             complement(23095..23697)
                     /locus_tag="PXB09_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5232403.1"
                     /translation="METLIEFFSSYGYWAVFLVLLACGFGVPIPEDITLVSGGVISGL
                     GYTNVHWMLVVSMLGVLVGDSTMYWLGRIYGEKILKFPLIRNVATPERFATVQERFEK
                     QGWKLLFMARFLPGLRAVVYLVSGITRKVSFVKFLLVDFCAAIISVPIWVYLGDYGAS
                     NLDWLKEQVANGQHLIFAILGIVILFLGWKWYKNKKQYKK"
     gene            complement(23699..24718)
                     /gene="purR"
                     /locus_tag="PXB09_000246"
     CDS             complement(23699..24718)
                     /gene="purR"
                     /locus_tag="PXB09_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDL5232404.1"
                     /translation="MATIKDVAKYAGVSTTTVSHVINKTRFVAEDTTKAVWEAIKALN
                     YSPSAVARSLKINTTKSIGMIITTSESPFFAEIVLAVEEFCYSKGYSLFLCNTQNKLE
                     KIQNHLDMLIKKRVDGILVMCSEYTANSFDIFENSNIPMVIMDWGRSDERSDIILDHG
                     VEGGYIATQHLIENGHQDIAVITGNRDKEIARTRFEGFKKALSEAGLSIREEWIQEGD
                     FEPEGGYECMNNLLKSSEKLPTAVFCFNDSMALGAISAITEKGLNVPQDISVIGYDNV
                     HSSRFYAPPLTTIHQSKSRLGSAALELLLERIEDNENAKEPKVLEFFPELVKRKSVRN
                     LNIKE"
     gene            complement(24854..25582)
                     /gene="cmoA"
                     /locus_tag="PXB09_000247"
     CDS             complement(24854..25582)
                     /gene="cmoA"
                     /locus_tag="PXB09_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDL5232405.1"
                     /translation="MQRDTLFSAPIEKLGDFTFDESVAEVFPDMIQRSVPGYSNIITA
                     IGMLAERFVTDNSNVYDLGCSRGAGILSIRRNVNAKNVQIIGVDNSQPMVERCKTHLS
                     AYHSEIPVTILLDDIRHIEIKNASMVVLNFTLQFLPREDRLALLQKIYQGLNSNGILV
                     LSEKFTFESEEMNELLIDLHHTFKRANGYSELEVSQKRNALENVMRTDSIETHKKRLQ
                     EAGFTQVELWFQCFNFGSMIAIKA"
     gene            complement(25592..26374)
                     /locus_tag="PXB09_000248"
     CDS             complement(25592..26374)
                     /locus_tag="PXB09_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5232406.1"
                     /translation="MTEKSQLNFNYQPSNNHANAQTMIFLHGLFGDLNNLGAIAKPFA
                     ERYSILMVDLRNHGRSFHSDEMNYALIAQDLAQLLTELNIQNAIVVGHSMGGKSAMAL
                     AAFAPELVEKLVVIDIAPVTYTQNRHQQVMAALFAVKEAKPQNRQQAKAIMAEYIRDE
                     GVQQFMLKSFDAQSEQSFRFNLQALKDNYQNVMGWQQVFVDKPTLFIKGALSDYIQAE
                     HTQTILAQFPQAKSFIVANADHWVHAEKTGTVVRAINKFLEK"
     gene            26493..27059
                     /gene="seqA"
                     /locus_tag="PXB09_000249"
     CDS             26493..27059
                     /gene="seqA"
                     /locus_tag="PXB09_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDL5232407.1"
                     /translation="MKRIEIDDELYQYIASRTQSIGETASDILRRLLRLPQSPQPFVL
                     VQEHMINELKELVKTPSRATKKNESNAEKTVEKLENILNSEHFMNENKNVVRFTMLLA
                     ALYRANPEAFAKATEKVRGNERIYFSQSEAEILATGSGVKAKQIPDSPFWVITNNNTA
                     RKGLILKGVMESMKVPSQLIERIQALFI"
     gene            27069..28487
                     /gene="menE"
                     /locus_tag="PXB09_000250"
     CDS             27069..28487
                     /gene="menE"
                     /locus_tag="PXB09_000250"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDL5232408.1"
                     /translation="MLINSTRFPTQFWAAHSAQNVAIIWEKGTSDYLNHLPSNITWYS
                     LNQLIAQAIFVLQQQGATPHSLIAYCGSHRLIGLLTYCASLALGAKILMLNPAQTASQ
                     RQAVLDDNGVELIINDADFAKFSAKTTACNAFPTIDFEKPATLTLTSGSSGKPKAVVH
                     SIAAHLYSAEGVCELMAFEQPNSWLLSLPLFHVSGQGIIWRWLFKGATLYVHEDKSDF
                     FLSAQKVSHLSLVPTQLQRYLNQLDSMVSQKCLLGGSMLPAELIAQAQQSGMTTFSGY
                     GMTEMASTICAVENDLNSVGFPLKHRELKLENGEIWVKGKSLGLGYWQKNGQIRPLVN
                     TQGWFATKDRGEWNHKKQLVIKGRLDNMFISGGENIQPEEIEQLIFRSQLVEQIIVLP
                     IEDKQFGHRPVAFLQFKQSDSKNELHKLKIWLSDKLERFKQPVAYYLLDIEKYQKQGL
                     IKLSRTQLQQDLKLKVLKEIYV"
     gene            28480..31857
                     /gene="mscK"
                     /locus_tag="PXB09_000251"
     CDS             28480..31857
                     /gene="mscK"
                     /locus_tag="PXB09_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDL5232409.1"
                     /translation="MFRPILKTFVLSLGLMLNSYALAELPTQQVVQTQLDSAKKLDQA
                     DADNKALVQTLEDTLAFLAQIDKQKADNQALNKSIQDSQKALKTSQHNLEKLKEVTIA
                     SVDNLTQKATTDLQKELTSTQSQLETVQHDLSIINNNLVAQNTAPDKAQTALTEMVKR
                     KQEISSQLSATNIKNELQTKLEVELELIELKNTYNQILLGGSEDLSALYSAQLDEKKQ
                     EQQNLQAEIANLQTAINNKIVEESQNKLDQAQAVQNQQNNATTNPVILRELDINTKVT
                     QELLKQTKDMTQLSQDNLRIKSVLDNLQQTQRNIEEQISSLQGTLVLSRIINKQKQSL
                     PQDEMISGLSKQIADLRVRVFDITEFKDSFADINAYISRIEQDEKTTFTSKEKEQLSK
                     ILQERSDTLTEMIKSLNNQLNLLINIELNQQQVQTISDALQQKLQQQSFWVKSNNPID
                     LEWFSKFVDITHYQFIDIGKKLNFSNWRDNLLPASILVGILLLLAIFINRQKDKIKQK
                     LHQINNRLKIVATDSQWNTPLAIFWTLVLCLPSTLMFLAGFVAITYISFENPQEVWTW
                     GLKMAIYWLYFAFLVAMLRPHGIGHIHFNMPQKSNEIFRNILKRSVWIIALLLNTSIF
                     TNLEMGISYDMLGQTMTIFVLILMIWMIVPAFRQAISTYENVTTEEKKESKSILLTIV
                     KLVLLLAPIILIILIALGYYYTALVIIEHLVDSYFAIITWIIIRNILYRAFSISSRRL
                     AYRRLQEKREAAEAKTRAKAEQNDENPDGVELPFELKEDSIAVSEVKNQMLKLTDFVL
                     WIGLFVLLYWVWSDLITVALYLDGVTLWQQSVTTEAGIVMESITLLNLLTAILIIVVM
                     VVLIRNLSGLLEALIFSHFKLSQGTPYTITTLLTYLIIALGAIFAFGTLGMSWSKLQW
                     LLTALSVGLGFGMQEIFANFVSGIIILFERPMRIGDTITIGTYSGTVSKIRIRATTLV
                     DFDGKEVIVPNKAFVTERLVNWALSSTATRIIVQVGVAYGSDLELVKRLLLQVAEENP
                     KVLKDPQPRAYFLTFGASTLDHELRAYVNDLSDRNPTIDALNTRIHQLFNEHNIDIAF
                     NQLDVYIKNNDTQDEIKVDSKRFEFERPNNITAKEKE"
     gene            31860..32942
                     /gene="aroC"
                     /locus_tag="PXB09_000252"
     CDS             31860..32942
                     /gene="aroC"
                     /locus_tag="PXB09_000252"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDL5232410.1"
                     /translation="MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMALSEADLQPD
                     LDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSQDYGDIAEKF
                     RPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREQFGIEVRGYLSQI
                     GNIKIDPKTVENIEQIDWHAVNSNPFFCPDPVAIEGFDALIRELKKEGDSVGAKLTVI
                     AERVPVGLGEPVFDRLDADLAHALMSINAVKAVEIGDGFAVVEQRGSQHRDEMTPQGF
                     LSNHAGGILGGISSGQPIIAHIALKPTSSITIPGRSVNKNNEAVEVITKGRHDPCVGI
                     RAVPIAEAMMAIVLLDHLLRFKAQCR"
     gene            32961..33788
                     /gene="mepA"
                     /locus_tag="PXB09_000253"
     CDS             32961..33788
                     /gene="mepA"
                     /locus_tag="PXB09_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDL5232411.1"
                     /translation="MKLLKTLLVSSLAFTATALNATQWEKIKTPVQGKAQSIGGYSNG
                     CIIGAQPLALKGEGYQVIRSARNRYYGHPQLLDYLTHLGKKTKAAGVPTILIGDMGMP
                     AGGRFASGHASHQTGLDADIWFKFGPMDDETARNPAGLATIMVNRSTERVDDSLWNQH
                     HTNLVKLAATDPRVDRIFVNPAIKVKLCQTAGNDRAWLRKIRPWYGHDSHFHVRLTCP
                     ADAASCENQALVPAGDGCGEELYSWFEPKEASGTPKAKVLPTAPVQCQMILSEQGLN"
     gene            33861..35780
                     /locus_tag="PXB09_000254"
     CDS             33861..35780
                     /locus_tag="PXB09_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5232412.1"
                     /translation="MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGH
                     LLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKETLKQFKVVEKLIKKADVLVNAG
                     DPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
                     SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVP
                     KDYFEVLAQIVVPETQERFKAQWQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPAT
                     VTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKLYETHKLITYPRSDN
                     RYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQ
                     GTVHLTENEKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRA
                     LLGKEDSLDDAEPLLPIVKKGQILHCEKGEIVSKKTQPPRHFTDRSLLSAMTGIARFV
                     QDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQALPDSA
                     TQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASG
                     NKPRYFKKRTQTAEN"
     gene            35886..36212
                     /gene="secG"
                     /locus_tag="PXB09_000255"
     CDS             35886..36212
                     /gene="secG"
                     /locus_tag="PXB09_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDL5232413.1"
                     /translation="MLINVLTIVYLVVAVLLIAFVLMQQGKGADAGASFGAGASATVF
                     GSAGSANFLSRTTALLATIFFAISLVIGNLSSHNVAPKSQFEDLSQVEQKQVEPVKIE
                     NSDIPQ"
     gene            36237..36322
                     /locus_tag="PXB09_000256"
     tRNA            36237..36322
                     /locus_tag="PXB09_000256"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:36271..36273,aa:Leu,seq:gag)
     gene            36525..37766
                     /locus_tag="PXB09_000257"
     CDS             36525..37766
                     /locus_tag="PXB09_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5232414.1"
                     /translation="MARTTKALNKTQIENAKSKDKEYILSDGDGLNLRVKPLPKGSKI
                     WIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE
                     NRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKALV
                     DIYSKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTIEL
                     EELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKEKM
                     KGKADKKRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVNSTLKRN
                     GYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLENTYNRYDFLEERVP
                     VMQLLGDYCEQCGMNLELVRG"
     gene            complement(37925..39793)
                     /locus_tag="PXB09_000258"
     CDS             complement(37925..39793)
                     /locus_tag="PXB09_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDL5232415.1"
                     /translation="MFKKLLELRQQKAAIEAEMRSILTKADEEKRSTTEAEGAKFDEL
                     RSQAENLVKEIARYEAITDEQRNQPGQQVETANVKVSDDELRHWIKTGELRSLATNTN
                     GGADGGYSVIPELDKQVMKRLTDDSVMRQIANVVKLTQGKEYKKLVSAGGAAVNHIGE
                     GEARTETATPKMNEVTIAVHNIYAYPKTTQEILDFGGVDILGWLTEEISESFVETEET
                     DLTNGTGTKQAKGFLAYPRTTANDKTRPFGTLQKMEVQPATVIGWNSKGQPETLTPYP
                     PYSVNVQRTVNRQNWLTAYIPHSYDENVAETPHFDQWLNFVSDGKQDKAKNILAALYA
                     ILTNRYNWQVFFQVTGKGGSGKSVFAGIATLLAGEKNTASARLENFDDERKIAGLEDK
                     KLIICSEQTKYAGDGGGLKAITGGDMVRVDPKNKHPFNARIAAMIMIVNNDPCKWTER
                     NGGIDRRIVNFRFNKRPPENERDPYFMDKITLEIGGIIRKVLDTFPDPLEAKRALEEQ
                     KESLEALEIKKQSDPLTDFFEYLYTTENTDGLYIGTGNTLGHDKIRTHLYPAYLAFVK
                     AKNVLELGLNTFVVGIEQAVKQHGNKHDFTKRKTNKGQRTNVHFKNFDDFQSDILN"
     gene            complement(39804..40199)
                     /locus_tag="PXB09_000259"
     CDS             complement(39804..40199)
                     /locus_tag="PXB09_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232416.1"
                     /translation="MISNEAIRQEVIDLLQGNIQGIQHFHNGRAVFTDVENELPAIAV
                     FIDEAEYSQLTLCDGECNAYLKIGIYLPMFSTENDLDLVAQKISDVMNQATFHSMDEC
                     VLAKYSYDYDANESAWKTATLHYNINYLN"
BASE COUNT        12570 a         8529 c         7670 g        11708 t
ORIGIN      
        1 ggctataata tatcaatttg acataatgac aagtaaaatc atacaaaatt gctctaagtg
       61 atgtaaatta caacagatat agtatcaaaa tacgcttatt gttgtaaaaa caatcaaatt
      121 atattctggt tttattttgt cgctgttttt gctattcttc tgtttatttt tcacatttta
      181 ttaacgatat aaggatattc gatgaattgg aaagcatata aaaaagctat tgcggcagct
      241 agcgtggtag cgattgcaac ggtattagtg gcgtgttcgt cttcaggcca aaaaggcaaa
      301 acaacctctt atgatgcgga aaaagctaaa tttggagcaa aatataatgg tcgtcacttt
      361 atgccttatg gcacacattt tcaagctgga cgtttaggat taaatgctgc tcctgttaat
      421 caactagact ttttacagca gctttctaat gtcagagcct atagtagctt ggcagattct
      481 tatgctatcg cttacggaaa aatcagtcgt tggatctcat cgggcggtaa tattaatgat
      541 ttagcaaaat atggtattag tactcgttta atgcgtggcg aagatggcta ccagaatgtg
      601 ttaatgacag ggtattactc gccggttatc aaagcccgta gaacgcctca ggggcaatac
      661 caacacccga tttatgcgat gccgtctagc aaacgttttt cacgggcgga aatttacgca
      721 ggagcattgc aaggtcaggg cttagaactg gcttatagta attcaatgct cgataacttc
      781 ttattaggtg ttcaaggtag cggttacgtt gactttggtg atggtcgctt aaactatttt
      841 gcttatgcag ggcaaaatgg ctttaaatat gccagcgttg ggcgtttatt agtagaagat
      901 ggcgaaattc cgaaagagaa aatgtcagtg caggctatcc gtgaatgggg gcaacgtaac
      961 cctagccgtg ttcaaggttt gttggagcgt aatccatcgt atgttttctt taaaaacgat
     1021 cctaccggtc aggtaaaagg ctctgccggt gtgccgttag taccacttgc atctgttgca
     1081 tcagatcgta gcattgtgcc atcaggtagc gtgttgttgg tcgaaatgcc gttgattgat
     1141 agcaaaggaa attggaccgg caaacacgaa atgcgtttaa tggtggctct tgatgttggc
     1201 ggtgcagtga aaggccatca cttcgattta tatcaaggga ttggcgataa agcaggccat
     1261 atcgcaggtt taatgaaaca ttacggccgt gtttgggtat taaattaata cagggtaact
     1321 atgttaaaaa aactatctgc catattctta cttctaccga gcgccgtgct tgcaaataat
     1381 ttgcaaaata taaccgcttc aactgagcct aaatataaaa tctcagaaat agatgtcaga
     1441 attttgatac gccagctcaa taatattgag caatgtatct atcctgagtt agctaaaccc
     1501 ggttaccagc aaatctacgc aaattggaat ctggctgaaa atttaacgat gcaatatttt
     1561 gaatatcagc ttctaaaaga gttgctcgga gaggaaaatc agaaactgat gcaaaatgat
     1621 acgctttcta ccgagtattt ccatttactg cattctcgtt taaatcacca aaaagcaaat
     1681 gtagatcccg aaaaatgcga tacatttaaa cctagatata aagagattta taaaagtatg
     1741 gaaaatgcac tcactaagaa aaatcaatag taaaaaactc gcagttttca ctgcgagttt
     1801 cttttatctt tcgttatgaa tttctaaatt ggtggcttgt tttgccgcct ctgcttttgc
     1861 tttatcgttt cgagatcttg ctatactgtc taaatagcat ttatctacat cacctgtaat
     1921 atattctcct gtaaatacag agtcatcaaa gcgatgaata gtcggatttt ccagttgaat
     1981 agacttataa agtgcttcaa ggtcttggaa aatcaattta tccaccccta tcatctgtgc
     2041 aacctcttcc actgagcgat cataagccac taattcttca caagtcggca tatcaatgcc
     2101 atacacattc gggtagcgaa tttccggtgc ggcagaggca aaataaaccc gttttgcacc
     2161 agctgctcgt gccatttcca cgatttgttc agacgttgta cctcgtacaa tagaatcatc
     2221 aaccagtaac acgcttttgc ctttaaattc agaggcaatc gcatttaatt tacggcgaac
     2281 cgagctttta cgctgtgctt gccccggcat aataaaagtt cgagctacat agcggttttt
     2341 aacaaaccct tgacgatagg gtttatacaa catattagca atacgtaccg caatatcatt
     2401 tgaggtttca ggaatcggga tcaccacatc aatatcatcg ataattcgtc cccattcacg
     2461 tttaattttc tcacctaata attcgcccat atgcactcgt gcagaatata cagaaacgcc
     2521 atcaatgacg gaatcaggac gggcaaaata aacatattca aaaatacaag gattcagttt
     2581 tggattatcg gcacaaattt gcgaatgtaa ttgcccatca aaggtaacat aaatcgcttc
     2641 acccggcagc acatctcgca caaattcaaa ccccactaca tcaagagcca cactttccga
     2701 agcaaacata tattcggttt taccctcgat ttcacgttta cccagcacta acgggcgaat
     2761 accgaatggg tcacggaaag caaccatacc gtgtccgata atcatcgcaa tgcaagcata
     2821 agcaccacga atgctatcat tggttttacg aaccgtttca aagatattgt ctgggcttaa
     2881 atgctgagtg gaatagagat ctaaaaagta agcaaaaata ttaagaaggg attcagaatc
     2941 agaattagtg ttcacatggc ggcgggcttc gttgtataag cgagctttaa gttccgcatt
     3001 attagttaaa ttaccgttgt gaactaaggt aataccgaaa ggtgaattga cataaaatgg
     3061 ctgggcttca gacacacttg agctacctgc tgttgggtag cgaacgtgac caattccaac
     3121 attgccttgt aatctcacca tatgctcttg ctggaaaaca tcgctgacta agccgttagc
     3181 tttgcgtaag cggaaacgat tttcatcgtc tatggtgacg atacctgcgg catcttgtcc
     3241 tcggtgttga agtaatgtta aaccatcata aatcgcctga ttcaccggcg aattcccaat
     3301 aataccgaca atgccgcaca tatagaaaaa cctctttatt tagtcgtgtt taaaaaactg
     3361 gaatttgctt gtaactgttc aaagaaccac ttcacaataa agtcaaaatg cggaattaat
     3421 agcgatgatt tccataattc cgtttggctt gcttgggtaa aggtatctaa gaaaaataaa
     3481 atagccgaca caattaaaat accacgcaat gccccaaaag caccgcctaa aatacggtcg
     3541 gtgatagaca ttccgctcaa atcaatcact ttgcctaata aaccgttgat cacaccacaa
     3601 acaattaaag tcaaaatgaa cagaatcgcc gctgcaatac cattgcgtaa aaattctgaa
     3661 ttttgcaaat aaaccgaatt aatttgtgtg agataaccgc ttaaataagg ataaaacgag
     3721 cttgccacaa aaaaggcgat tacccaacca agtagcgata atgcttcatt ggtaaaacct
     3781 cgccataaac tgataagcac tgaaaaagca atgattccga taacaattaa atcaaccata
     3841 acacacctta aagcgtaaag ctctcctatt ctacaaaaaa agaaaacgtt tgcgtagcac
     3901 tatttcgcta aaaataagtg ctttatgcaa atacaagcgg ttaaattcgg taaaaaattt
     3961 acacaatccg accgcttgta aaacctagtc tgcaatataa ccaacatcgt ccaacgttgg
     4021 attatttgct ccttgtttag ccagctcatc gcaaatctca ttttcacgat gtcctgaatg
     4081 ccctttcacc caactccatt caatttggtg gcgttgaatt tcttggtcta aagcaaccca
     4141 taaatcttta tttttaactg gctttttatc gctggttttc cagtcatttt tcttccagtt
     4201 aaaaatccat ttttggatcc cgtttttcat atattggctg tcactattga gttgcacctt
     4261 acaaggctct tttagcattg ctaaagcctc aatcaccgcc cgcaattcca ttcggttatt
     4321 ggtggtttga aaatagcctt tgctcacggt tttttcgtac ccgttataac gcagcaaaat
     4381 accaatcccc cctttgccgg ggttgcctaa acaagaaccg tctgtaaaaa tttcaactaa
     4441 tttcatcatc acgctttgaa aataaaagcc ccaaagcatt aactttgggg cagcttttag
     4501 gctaaattct aaaagttatc agaatggaga tcaactgatt atttttttcc aagttgtgga
     4561 atcacgctat tattagccgc caataaacct gcatcggtat aaactgctaa tttaccacgg
     4621 gtatcgacaa tatctaagtt acgcattgtt aattgaccga tacgatctgc cggcgtaaac
     4681 ggtgcatctt ctactttttc catacttaaa cgttctgctt cgtaggttaa gtttggcgat
     4741 tcagtgttaa gaatagtgaa atcgttacca cggcgtaact caagcgtgac cgtaccggta
     4801 atcgcttttg ccacccaacg ttgagccgtt tcacgcaaca ttaaagcttg cgggtcaaac
     4861 cagcggcctt gatacaataa acgccctaaa cgtaatccgt taatgcgata ttgctcaatc
     4921 gtatcttcgt tgtgaatacc ggtaactaaa cgctcgtaag cgatgtgtaa taatgccatt
     4981 cccggtgctt cataaatacc acgagatttc gcttcgataa tacggttttc gatttggtct
     5041 gacattccca aaccatgtct gccaccaatg cggttagcct ccataattaa ttcaacggca
     5101 tcatcaatac gtttaccgtt taacgccacc ggcacacctt cttcaaaggt aacagaaaca
     5161 gtttccgctt taatttcaac tgattcgtcc cagaatgcca cgcccataat cggttttacg
     5221 atcttcatac cggtgcttaa ttcttctaaa tctttcgctt cgtgggttgc acctaacata
     5281 ttcgagtctg tagagtaggc tttttccacc gacattttat agtcaaaacc gttttcgatt
     5341 aagaatttag acatttccaa gcgaccgcct aattcatcaa tgaatagttg gtctaaccac
     5401 ggcttataaa tttttaattt tggattggtt aataaaccgt aacgatagaa acgctcaata
     5461 tcgttacctt taaaggttga accatcgccc cagatattca catcatcttc tttcattgcc
     5521 gcaaccaaca ttgtgccggt taccgcacga ccaagtggcg tggtgttgaa atacggaata
     5581 ccgccggttg aaatatggaa agcaccgcat tgaattgcgg caatgccttc gtgagctaac
     5641 tgttggcgac agtcgattaa tcgtgcattt tcagccccat attccatcgc ttttttcgga
     5701 attgcgttgt aatcatcttc atccggctga cctaaatttg cggtgtacgc ataaggcact
     5761 gccccttttt tacgcatcca taacagtgct gctgaggtat ctaaaccgcc tgaaaaggcg
     5821 atacccactt tctgccctaa aggtaaagct tctaaaattg ttgctgacat acgaattcct
     5881 ataaattttg aaagtaaaaa tattcaaacg caaacgctta cgttcaagca aaatattcta
     5941 gctgaaaagt agtaaaaatt catctaaaat ttagcccgat gatttgcaaa ttttttgtga
     6001 aatttgaccg cttataattt actgaaaacc taaaagcaat agagaaaatc agaatgaaaa
     6061 aactactcgt aatccgtaat gataaaattg gggactttat ggtctgcttt ccggcatttg
     6121 ctatgttgaa gcaatcaatg ccgaatgtgg aaattaccgc tcttgtgcca agttatactg
     6181 ctccacttgc cgagctttgc ccttctattg ataagattat tattgatacg gcgaataaaa
     6241 aagataaaaa tgaatttaac cgtattttac aagcggttaa aaatgagcaa tttgatgcgg
     6301 ttatttgttt tgtttcagac tggcataatg ccaaactcac ctggcaaagt gggattaaat
     6361 accgcctcgc tccagcaact aaattattcc aatttttata taaccaccgt ttaacccaac
     6421 gccgttctca atcagcaaaa gcggaatccg aatataattt ggatttagcc cgtgcttttt
     6481 taagcaaaca caatataccg attgttgaac ctcacacgcc atacttaagt gttgaacagc
     6541 aaaccgtcca ggcacaaaaa gcaaaattat gcgaacaact caatattacc accgttaaaa
     6601 agtgggtatt tgtgcatagt tcaaccggtg gttcggcaaa taatttatct atagaacagt
     6661 atgcagagtt aattcaaggt attttggcag aatttgattg ctatgtggta ctcaccgcag
     6721 ggaaaggcga aagcgaaaaa gctcagcagt tagctcaaca aatcaatcac aacaacgtgg
     6781 tggtttatga taaaaatgag gggttacaag attttacaca ttcgcttgcg tgtgcagatt
     6841 tgtttattgc cggctcaacc ggtccgttac atattagtgg ggcgttaaat attccaacta
     6901 ttggcttcta cccgagccga ctttctgcca ttccacgccg ttggaaaccg attaatgatg
     6961 cgaataaaca cattgcattt tgcccaccgt ctgataaagc ctcacaaatg aatttaactt
     7021 taatttctat ttctgaggca ttaaaaacga tagtaccgtt tattcggaga atgtggaata
     7081 ctccctctct ctgataaaat tgctaaacgc aattttatct atctctctcc cactagaggg
     7141 agagagtact gaaaagcatc atttccgagt acgattccac aaatccgcat attttacgaa
     7201 agtagaatgt gccgaaagaa ctgccaataa aaatccttgc ttgccatcta aaaaaccggc
     7261 ttttaataga tacattttca caaaacagcc gatggcgtga gtcacgccat caaataagct
     7321 ggctgttttg cctgcatttg cccgttggat tgcccacgct ttagcgtaac ttgccgattt
     7381 taccaaatag tggtgaatat ctttataggt gaaatgcagc aaatcgcctt gtagtttctg
     7441 gatttttgcc tcttttgggt aatgtacttt ttcgtgaacc aattcatcac catatttggc
     7501 aaattccgtg cgatacaatc tcaccacaca atccggatac caacccgagt ggcgaatttg
     7561 tttgccaaat acttcactta agcggctgat tttgtaaacg gtattttttt catcattttt
     7621 gaccgcttgt aaaatagatt gcttcagttc ggctgtcact cgctcatctg catcaagcca
     7681 aagtacataa tcactggtca catattgttg agctaactga cgctgtttac caaagccttg
     7741 ccaatcggtg ttagtgtaga accttgcgtt gtattcagca gcaatttgtg gtgtttcatc
     7801 agtactgcca ctatctaaaa tcacaatttc atctacccaa tcttttactg tgtcaaggca
     7861 agcccgtaaa tcttgagctt catttttgac aatcatcgca acacttaatg tcggcatagt
     7921 ttatccttct ctctttttgt cgtgtgtttt tctgctattc gttgcatttt actttaaaaa
     7981 tagtggtttt tgtgctattt tctacgccaa attttatcaa caaaacaaat taacggaaaa
     8041 agaatgtcaa ttacattaac aaccaaacaa aaacaattcc taaaaggctt ggctcatcat
     8101 ttaagcccag tggtgatgct ggggggtaac ggcttaacag aaggcgtgtt agctgaaatc
     8161 gataacgcct tagaccacca cgaactgatt aaagttaaag ttgccggggc tgatcgtgaa
     8221 accaaacaat taattattga tgccattctg cgtgaaacta aagcggctga agtacaaacc
     8281 attgggcaca ttttagtgct ttaccgccaa agcgaagaga aaaaaatcag cttgccaaaa
     8341 gcaactaaag cgatctaatt gcaaaaatat gtttaaattc aaccgcttgt attcaagcgg
     8401 ttttttatag gactttctat gtttaaaaaa ttctctcttt atacccttgc aatgttgctc
     8461 attcctgtgg tgacttggct ggcaaattgg cactggtctc tggcaattca atacgctgaa
     8521 tttgatttcg actacttttt atatttaatc accgaaaccg gctccgtacc ttatgccatc
     8581 atcacctgtg tggttttcgc cttattactg gcgagggtgg ttcgcaaacg ctactcttta
     8641 atttttgtga ttaccgtgtg tgtcgcttca atggtagcca ctcaagcaat caaaacagcg
     8701 atgaaatcaa cctttcaaga gcctcgtcca tttgtcactg ctcttttcca agataaaaca
     8761 gacgattttt atcaattaac acgcgagcaa cgtgggcttg ccgtaatgga aaaaatcggt
     8821 gcaaatcaaa attttgttac cgctcaccaa gccaaagaag tgggctattc tttcccatca
     8881 ggccacacta tttttgcggt ttcttggcta ttattggtgg taggtttctg ccgtaatatg
     8941 cgaggacaag cggtcgtttt ggctcatttt tttgcaatca gttgggcggc gttaatgctg
     9001 attagccgct tgcgtttagg tatgcactac ccgattgatt tattcaccag tagtttaatt
     9061 gcgtttctaa tcaatttagc cttatttgtg tggtttgtgc cttggttgga aagtaaaaaa
     9121 tggtttgcta aaaagcctta attggcaatt tagccaaatc aatatacaat acaaattatt
     9181 gaataagtac ctaaaataag gagcttagaa tggaaatgtc gatagaaaaa atagctgaac
     9241 tattaagcga taaagaaaaa gatgactatc cgtttagtat tgaggaaaga caatttgccg
     9301 cccaggctag tgctgatact tgggaggcaa tcttaaataa cactattcaa ccttttgact
     9361 tcaaaaaata ggcttgctat gtatcaagtt tttattgcag aaccaaaaga cccaaactta
     9421 gagaaaggct tattgaaaca cttcattaag tcttatctta ctcaagaaga actcgatttc
     9481 ctgcataaaa ttctcactaa tttacccaac atcagacctt tttggggcga taccggttac
     9541 aaatatatcg tcattgataa tgtttacttc ttgtatgaag tttccgaaag tgaaacgaaa
     9601 gtcattctac ttggcaccaa atttaataat aaacggaaaa cttttaattt tgcgaatacg
     9661 aaaacccagc aaaaatcaat gaagaaatgg attaatgatt tagcaattta taaaccgcat
     9721 aaaatcaatc aatcgcaata agagagcgta attatggcaa tttattatgg cttagatgtg
     9781 ggcggcacaa aaattgaatt agccgctttt aatgaaaaac tagaaaaact acacagcgaa
     9841 cgtgtgccga caccgcagac aaattatcaa gattggctga cggcaattaa aacgctggtt
     9901 gagactgccg atacaaaatt tgacgaaaaa ggcactgtcg ggctgggcat tccgggcttt
     9961 gtaaaccgtg aaaccggcat tgcggaaatt accaatattc gagtggctga cggcaaaacg
    10021 attctgaaag atttagccga atgtttaggg cgtgaagtgc gtgccgaaaa cgatgctaac
    10081 tgctttgccc tgtctgaagc gtgggacgaa agtaataagc cttattccac cgtattaggg
    10141 ttgattatcg gcaccggttt tggcggtggt tttgtgtttg acggtaaaat tcattcaggc
    10201 agaatcggaa tggcaggcga agttgggcat atgcaactta actaccacgc acttaaattg
    10261 ctcgactggg ataaagcccc aatttatgaa tgtggttgtg gcaaccaagc ctgtttagac
    10321 acctatattt cagggcgggg ttttgagtta ctgtttaatg atttagtagg agaaaaaatc
    10381 tcggcgaaag cgattatcga acgcttctac caacaagaaa ccaaagtggt ggcatttgtc
    10441 gaaaaatata ttgagctaat ggcaatcagt atcagcaatc tgattacgat tttagatccg
    10501 gatatgattg tattcggtgg cggtttatcc aactttgatt atatctacca agctctacca
    10561 aaagcattac caaaacactt aatgcgttca gcgaaagtgc cggtcatcaa aaaagcaatt
    10621 cacggcgact caggtggcac tcgtggtgca gcagcattat tcttaaagta atgaacaaat
    10681 ttgagagagg gcaagcggtc atttttaata aaaatattgc agccctctct tttaatttgc
    10741 cttactgctt agtttcttcc ggtaatttat ataactgatt tttatataaa taactgccaa
    10801 gcaatgcgtg tgctaacgcc tcttttttaa acgattccgg ctgttcttta ggggtgagtt
    10861 tatagttagc tttatcgtag ctaaatcctt ctatcggtaa atttggtcgc attaccacca
    10921 catcatttcc ccgcatcatc gcctgtgtcg catcatattg cataaaggca cggtttgggt
    10981 caatgtcttg cgttaaatca taccctatca tcggatattg accacttatt cccgccacag
    11041 aaagtaatgt tgtcggcata tcgagctgac tcactaaacg gttatccgtt cttggctgaa
    11101 tgtgttcgcc taataaaagt gccggaatat ggaagtgttg aattggcact aaatgctcgc
    11161 caacggctct tgaatcgtga tctgcaatca ctaaaaacac cgtatcttgc cagtactctg
    11221 attttttcgc taactcaaag aaatgcccga tagcataatc ggcatatttt gccgcattat
    11281 ggcgagtctg cttcggttgt tcatagagtt caattttgcc gtccggaaat tcaaacggat
    11341 cgtggttact ggaactgaat accaaactaa aaaacggttt acctgatttg tgcagttgat
    11401 taaaagtttc atttgcctta tcaaacagat cttcatcact cacgccccaa gttgcggtaa
    11461 atttagggtt tttataatct ttttcatcga taatttgctg gaaaccatta ccgtagaaaa
    11521 agctcgccat attatcaaaa tgcttctccc caccataaat aaaggaagta tggtatcctt
    11581 gacgttttaa taattcggca atactaaaaa agttagtttg gcttttcgtc agttttacca
    11641 cagatcttgc cggtgttggt gtaaaaccag ccgttaccgc ttcaattcct ctcaccgaac
    11701 gagtacctgt tgcataaaga ttggtaaaat accagccttg ttctgaaagt ttatctaaat
    11761 ttggagtgag atttttccct cctagcgaac cgacaaattg agcccctaaa ctttcttcta
    11821 agataatcac aatgttttta ggctttcctt gataagtcgc tttattttgc gtgagggtgg
    11881 gaatttcatc tgaaatataa tctgaagctg gtcgattacg aacctgctta acaatgttga
    11941 acatttcctc cacagacatt tttccatact gttcggaaga tttatcttca tctttcaatt
    12001 gctgaaccgc ataaagcacg gaataacctg aatttagcac cagtgaattg acaagcggat
    12061 cgcttgaaaa tgccaccatt gccggattaa tccctcgatg ggcaaaactg gaacgcccac
    12121 caacaaaaac tattgcagca accaataaag ccagtagcgg acgcattttc cagctcggga
    12181 aatgcaaatt tttggttgcc caacccgata atttccaata aatgatgaga gaaatcatcg
    12241 caatgccaat cccacaaata acagcccata aatgtccgtt aatcagcatt gtgaacactt
    12301 ctctcggatg gaccaaatac tcaatgaaaa gacgatttgg gcgaaggtca aaggtttcaa
    12361 taaaattcgg tgtggcgact tccataaaaa gaataaatac actaccgaca gttagccaaa
    12421 ttcttaaaac agtctgccaa atcgaaccca gtacattttt atgaaaacac aacacgctaa
    12481 ataatgccgg taagccaaat agccaacata gcgaagatat atcaatgcga ataccttgta
    12541 gtattaatgg tatccatcca tcaacagcgg atactcgatc agattgccaa acgcctaaca
    12601 ctaaacggga taaggtgagg ataactaaat taatcccaac aaatagtagg attggaaata
    12661 gcacagttct tgattgactg cgttggtaca ttttgaatct ccttttaaaa aaatatcggc
    12721 atattataat tgaataatga caggatcgcc tacttttatc acaccactgt tttgtggcac
    12781 aaggtgaata ccgaacaccg gcttaccttt ttcatcgcaa tgcttttctt ttaaggttct
    12841 aaacggctcc gatttggggt ctaactcaag cgtgtttaaa tcccgtgtaa tcaaaatgca
    12901 acgagtacat aatgccgctt tggtaaatag cacttcgcca atttgaactt gttgccactg
    12961 ctcttcttca aatgccacat tgccatcaat cacaatattc gggcgaaaac gagccatttc
    13021 gagtggaatc ggcgaccatt gttgcacttg ctcaagcgat tttagagaca tcaaactcac
    13081 cgggttgcta tctgcaaaac tcattgggtg atcggcaaaa ttcgcaacaa ttcgttggct
    13141 ttgcgagcca agccaacgta gttgcacagc cctaccaaaa atttcactca gccattgatt
    13201 gaccgcttct gccgccactt tggcattaaa atgtgttccc cacacttcac tactctgctc
    13261 ttccacaaaa tcttggtaaa gtgcaacgca tttttgaccg cttgtatggg taatcattac
    13321 ccctgtcgca atcgggaaag ccgctagacg gtataattcc ggatctttac gggcagtaat
    13381 aaatttgccg ttaggctcgg ctagcataaa ttcacggtca aaatttaagc ctttcggttc
    13441 aacaaatgcc tgtgaaactt gaatagcttg agttgatttt atcgggtaaa tattgagctc
    13501 ggtaacttgc atagaaaatc ctccatttgg aaataggata acaatacctg caagcggtcg
    13561 aaaagtaaaa ggaatttgca aatcccttgt gagaacggta aacttgagca acttttacag
    13621 caataggtca gcaacaatgg caaagaaacc cactcaagat tttgaaagca cacttaaaga
    13681 attagaagca atcgttaccc atttggaatc cggtgattta ccgcttgaag aagccctcaa
    13741 cgaatttgaa actgcaatca aattagtgca acaagggcaa gaacggttac aaaaagccga
    13801 gcaacgtatt caaatcttat taaataaaaa cgatactgcc ccacttagcg attacgaaag
    13861 agaataatca caatgagcta tctattagca accgatctga ctcacctgca acaacggatt
    13921 aaccattttc tcgctgaaaa attaaaaaca acggatagcg ttggttcgcc tttagtagaa
    13981 gcaatggctt atgcggtatt gctaggcggt aaacgggtgc gaccgttttt aatctatgcc
    14041 accggcagaa tgcttggtgt gccgttggaa aaattagatc atagtgcggc ggcaatggag
    14101 gctattcacg cttactcgct ggttcacgat gatttaccgg caatggacga tgatagatta
    14161 cgccgtggca agccaacctg ccatattgcc tttgatgaag ctaccgctat tttagccggt
    14221 gatgcgttac aaagttttgc gtttgaactg ctggcaaccg atccgcattt gaccgaccga
    14281 gaaaaagttg ttcaagttac agaattggca accgcttccg gtgcaaaagg aatgtgctta
    14341 gggcaaagtt tggatttgat tgcggaaaat aaagcggtga gcttggaaga gcttgaatta
    14401 attcatcgca acaaaaccgg ggcattgatt ctatcatccg tgatgatggg attaaacctt
    14461 tccgaatatt cgcaaaatgt agccataaaa caaccgcttg taaactatgc caaagcgatt
    14521 ggcttagcct ttcaggtgca agatgatatt ttagatgtca ttggcgaaac agataaaatc
    14581 ggcaaaatag tgggttcaga tgaacactta aataaaagca catacccgaa attgttgggc
    14641 ttagacgggg caaaacaaaa agccgaaatg ctttatcaaa ccgctctcca ttcgctggaa
    14701 cagttgcctt tcgataccac cgcattaaaa gagttagcta attttattgt taagcgtgaa
    14761 aactaagaaa aaacctagcc gaagctaggt tttttagtga ttaaacgtga ggctgagctt
    14821 ccggcaatgt gccttcaatt tcatatacca catcgccgtc tttaaagaaa acatagccac
    14881 cgtttttcat tttggtccag ttttcatttt tggtaagtgg ctgagtggca ataatcgtca
    14941 ctttatcggt aattttggta tattgactaa aatcaatcga cacatcatca tcacgcaagg
    15001 ctttgccaaa cggtgcttta cggcaaacgt aatgcagatt agttgtacaa cgggcaatca
    15061 tccaatgacc gttggataaa acaaaattaa ataccccgtg ttccgcaatt cttgaggtga
    15121 tttgcaccac ggcatcaaaa atctcttttt cgcttggttt agccggatac atctctttta
    15181 attccgacac aatacggcaa aatgccgctt cggaatcggt tgtaccaatc ggctggtagt
    15241 ggcactcctc gcatacccca acaccttcca ctgtgccgtt atgggcaaac acccagttct
    15301 cgccccataa ttcacgaatg aaggggtggg tattttccaa attcacatca ccacgcgtag
    15361 ctttacgaat atgtgcaata acattgagcg atttaatttg atattggctg attgcttctg
    15421 ccatcggcga tgatgctccc gggcggttat cacgaaaaac ccgaacccct ttgccttcaa
    15481 aaaaggcaat tccaaaccca tcagtatggt gatccgtcag cccaccccga cggcgaaatc
    15541 catcaaaaga aaaagtaata tcggttggcg tattacaatt cattccaagt aattgacaca
    15601 taatttgctt cttaaaacca aataatttac aacaaaaaat aattgttaca tttaaacaga
    15661 ttgattagaa aattcaatgc tctttacata aaaatcttat gctttatttt catacattat
    15721 gctgtttaat ggtattcttt tttgaatagc gataatagaa aaatcaagcc ggcacaaatg
    15781 actaccgaag gccctgctgg tgtatctttc caactggata acaataaacc gccactgact
    15841 gcaataatac tgaagaaaat cgcaatcaac accatttttt caggcgtttt agcaaagcgt
    15901 cttgccgtag cagacggaat aatcagcagt gaggtaataa ttaaagcacc gacaaatttc
    15961 atacttaatg cgatagttaa tgcggttaaa atcatcagca ataaacgtaa gcgagccaca
    16021 tttaatcctt caatttgagc aagttccggg ctgatggtaa tcgacaacaa ccgcttccaa
    16081 aacagcatta aaatcaaaca aattagggtt gctccgattc cgataaacac cacatcagaa
    16141 aaattaattg ccagtaaatc gccgaataag taagacatca aatccactcg tacattatcc
    16201 aacaaactaa tggtaattac cccgagagaa aggctagtat gggcgataat ccccaacacg
    16261 gtatccaccg aataattggt tttttgctcc aaccaaacca gcaataatgc aagaagaata
    16321 gtcattccaa ttacagcaag atacggatcg agttctaaaa aaatccctaa tgccacgccg
    16381 agcaatgcag agtgcgaaag tgtgtcgccg aaatacgcca tttttcgcca caccacaaaa
    16441 gcccctagag gtgcggtaat aaaggctaac aaaacaccgg caagccaagc cggaaataaa
    16501 atatcaaaca tattggttct caaaggcaag taaaacaagc ggttattttt tcggaaaaat
    16561 ttgcaaattt tttgctgatt tagaccgctt gtcatattta tttataacgt tgaatcgggc
    16621 tggcttgatc ctgtgctttc agccacgcca ttttttcttt aatctgtttt tccattcccc
    16681 gctcacttgg gaagtagaat tcggtatctt tcagctcagg cgggaaataa ttctccccgg
    16741 cggcataagc gtttggctca ttgtgggcat agcgatactc ttcgccatag cctaaagatt
    16801 tcattaattg agtgggagca ttacgcaaat gcgccggcac atcgtagtct tttgcctctt
    16861 tagcgaggcg ctttgcttca ttaaaagctt gatagaccgc attgctcttt ggggcaactg
    16921 ccaaataaat gatcgcttgg gcaatcgctc tttcaccttc ataagccccc actcgggtaa
    16981 agcaatccca agccacaatc gcaatttgca ttgctcgagg gtcggcatta ccaatatctt
    17041 cagaagcaat cgcaagcagc cttcttgcca cataaagcgg atcaccaccg gcggttaaaa
    17101 ttcgggcata ccagtataat gctccatcag ccgatgagcc tcgaatggat ttatgtaacg
    17161 cagaaatgag atcatagtaa cgatcaccgc ctttatcaaa acgagcttgt cgttcgccta
    17221 acacttcggt cagcaaactt ttattcagca ctttcccttt agctgaatct tgtgccatat
    17281 ctaccattaa ttccaaacag ttcaaggcaa aacgggcatc accattaaca taatcagcaa
    17341 gcaatgccag tacatcatct tcaagtacca aagtttcatt gcctaaacca cgttcggtat
    17401 cggctatcgc catttgcaaa atttttagaa tttcgaccgc ttgtaacggc tttaaaatat
    17461 aaattctggc tcgggaaagc agtgcgttat ttagctcaaa agagggattt tcggtagtcg
    17521 caccaataaa aataatagtg ccgtcctcaa tatgcggtaa aaacgcatct tgctggcttt
    17581 tgttaaagcg gtgaacttca tccacaaaaa gcaacgttcg tctgccggct tggcggttta
    17641 atttggcttg ttcaatcacc tctcggatct cttttacacc gctggtcaca gcggaaatac
    17701 gttcaacttc cgcatcaaga tgatgggcga taatttcagc tagggtcgtt tttccggtgc
    17761 cgggcggtcc ccaaaaaatc atagaatgac tatgtccggc ttcaatcgct ctgcgtaacg
    17821 gtttgccttc gccaattaaa tgagattgcc cgacatattc agccaagttt cgaggtcgca
    17881 ttttggctgc aagcggtcga aaatcttcac taaaatcaaa agacaaacta ctcattttaa
    17941 cctcttaacg taaccgcagt tggcgacgaa tatgacgcat taataagaaa atccaagacc
    18001 aaagcacacc actgattaca gcacctaaca attcctgtga attaaattcg gcactgtgta
    18061 aaatgtattc aatcacgaaa ataaagaaac ggatcagcac aatatatgcc attactaata
    18121 ggctttgtag ccatagcgat aagtttcgca gaatcagatg gtatttcgca acaaaataaa
    18181 tcgccaccga taacactaag gcgtggatgc ctaaaatcga gccaagaatc agatcccaga
    18241 cgatgccggc aataaaagcc gtccccacac tcattttatc aggtaatgcc aatgcccaat
    18301 aaattaacac caaaacgacc caagtagggc gtagcccttg gaatcctacc ggccaaggca
    18361 taatctcaag tacaaaagca accacaaaaa tcgcaattat cacaaggatc tgaaaaatcg
    18421 ggtttgttct cattattccg ctccttcttc cgtatgatag ttttgttcat tttccgcttc
    18481 tggttgtgct gccggattct catttatctc atcattctct atttgttctt cttttgcctc
    18541 tagctgcact tcagttttct tgttagacat ctgttttaaa cgttcaaatg gattcacgct
    18601 attacgtctt tcttcaacaa cttcacgtac ttgcgctggc gacaagcttt gggagtagtt
    18661 tttctcttcc gccgtcggcc aaagcagtaa taagtaacgt aagcgatcaa atgaggctaa
    18721 cggacgagca acaattctgg caaattgact tttggtatca ttttcaaccg tttctacaat
    18781 cgccaccgga tatccctcag ggaaacgtcc acctaagcct gaagtcacca gcacatcacc
    18841 ttttaccaca tcaatagaac gaggcaagtt atcaatgacc aattcattat tcacccctgt
    18901 accactggca atgccacgta catcattgcg tagcacttga acaggaatag catgagtaat
    18961 atcagagagc aataaaacac ggctagattt ttcccctaca gaaataactt gtccaacaac
    19021 acctctttca tcaataatag gttgcccgac aaaagcaccg tctaaacgcc cttgattaat
    19081 cactacttgc tgacgataag catccatctc agcagctaat acttcagcaa tttttttata
    19141 ctcatcttgc cgaagcggag aactcaataa caatcttaaa cgctgatttt caacctttag
    19201 ctgatcaagc aataataaat cggcactttt ttctcttagc tgctctttta ataaattatt
    19261 ctcaagctgt aatttattat tatcaataaa attgccactt accccatcta aaattgaacg
    19321 gggggtatta gcaaaataat ataatccact taccgcggtt tctaatagat tacgcgcttg
    19381 aatcattaaa gagctacgcc catcggaaat aatcagcata atagaaaata tcactgcgat
    19441 aatcaggcgc atccctaaag agggagcttt agcaaaaata ggtttcatta gagaaatata
    19501 tgtgaattta ttgggaatct ataacgaaaa ttgacaatag aatcaatcca ttgccaacct
    19561 ccatttaaac agctgctaag agaaatgtat taatcatcaa tactaaatac atcaccaccg
    19621 tgcatatcga tcatttctaa tgctttacca ccaccacgag ctacacaagt taatggatct
    19681 tctgctacta cgacttgcac gccagttgaa tcagaaagta aacgatctaa attatgtaat
    19741 aatgcaccac ctcctgttaa caccataccg cgctcaaaaa tgtctgctgc caattcaggt
    19801 gggcattgct ctaagactga tttaactgcc tctacaatac catttaatgg ttgttcaatt
    19861 gcttctaata catgtcttga gttaagctcg aaagtacgag gagcgccttc agctaaattg
    19921 tgtccgtgta cttccattgt tttaacatca tcatcggatt caatcttagc actagcaatt
    19981 tcttgtttaa ttcgctctgc cgttgcttca ccaatagcag aaccaaaatg acgacgtaca
    20041 taagcaataa tagcttcatc taacttatca ccaccaatac gcacagaagt tgaatacaca
    20101 atgccgttta aagaaagcac tgccacttcg gttgtaccgc caccaatgtc aattaccatt
    20161 gaccccattg cttcgtgaac cggcaaacct gcaccgattg cagccgccat tggctcttca
    20221 attaaataga cttcacgcgc tcctgctcca attgcagatt ctttaattgc acggcgttcc
    20281 acttgtgttg cacctgctgg cacgcacact aatacacgag ggcttgggcg cataaagtta
    20341 ttactatgta cttgtttaat aaagtgttgc aacatttttt ctgttacaaa aaaatccgca
    20401 atgacaccat ctttcattgg acgaatcgcc attatgcttt ttggtgtacg gcctagcatt
    20461 aattttgcat gtgagcctac cgccgcaata ctttttagcg atcccatacg atcttgacgt
    20521 acagcaacca ctgagggttc atctagcaca ataccttgac ctttaacata aaccagtgta
    20581 tttgctgtcc cgagatcgat agaaagatcg tttgaaaata atcctaaaaa ttttttaaac
    20641 ataaaagaat ccgttaaaat aaaattattc aaaaataagc acattttata gtgcgaacat
    20701 tgctactaat atagcaaaaa agcccgtcat tcatcaatga aaaaatttaa actccactag
    20761 aaaatttgca gagcaagttg ataagtataa atcagtaaac taaaagcgat aaagtacata
    20821 attagcccgg taacagcatc taaaatttgc caagttcttc gctttgcaaa ataaggggaa
    20881 agtaagcttg ctccataacc tatgccaaaa aaccaaataa atgagcaaag taatgcacct
    20941 gctaaaaagt atattttacc gttaaaatct aatttcccac cgatactgcc tacaatcaca
    21001 accgtatcaa tataaacgtg aggatttaag aatgtaatcg caaaggtaat cagtaaagcc
    21061 ttttttaagc tcgttgcatt ctctccactt gccacaaggt attcaccact tttaaatacg
    21121 ctgataaatg aacggctacc gtagcttaat agaaaaatgg cccctaaaag cgaaataatg
    21181 aaacttacaa caggcaattc cgcaattaac gtgcctaagc ctagcacacc tatcgtcatt
    21241 aaaaatacat cacctaaaaa acagagcaat gcaatccaaa atatgtgttg ttttaaaatc
    21301 ccttgcttta ataaaaaggc attttgtgcg ccaatagaga caattaagcc aaaacacact
    21361 ataaatcctt gaatgaaaat atccattttt tctccaaaat cgcataacaa gcggtcaatt
    21421 atacaaaaaa ttttgcaaaa cttcggtata atttatcgaa tactcttttg actgaatagg
    21481 aaatttttta tgactgatac tagccagact tcatcttgcg ttgtcattgc gattgccggc
    21541 gcatctgcct caggtaagag cctgattgcc tcaaccatct ataaagaact caaaaatgaa
    21601 ttgggaacag ataatatcgg tattatttcc gaagatgctt attatagaga tcaatctcat
    21661 ctaacaatgg aagaacggat taaaaccaat tacgatcacc ctaattcaat ggatcatcat
    21721 ttattggttg aacatttacg ccaattaaaa caaggtaatg cgattgaaat tccagaatat
    21781 gactataccg aacataatcg taaaacgacc acgaagcact ttgaaccaaa gaaaatcatt
    21841 attttagaag gtattttatt gctgacagat gagaatattc gcaatgaaat taatgtttct
    21901 attttcgtag atgctcctct ggacatctgc tttatccgcc gcttacaacg tgatatggtg
    21961 gaacgtggac gttcgatgga atcagtgatt agtcaatatc gcaaaaccgt tcgcccaatg
    22021 ttcttacaat ttatcgaacc ctctaaacaa tatgctgata ttattgtgcc aaaaggtggc
    22081 aaaaaccgta ttgccattga tattcttaaa gcacaaatta agcaattact aaaataaaat
    22141 aggagctaaa tatgcgttta tgtgatacag atattaaacg ttacttagat gaaggtatta
    22201 ttgccataac gcctcgacct tcagacgata aaatttctgg cgccactgca gatgtgcgtt
    22261 taggtaattc gtttcgtgta tttcgtgaac ataaaacgcc ctatattgat ttaagtggcc
    22321 ctagagaaga agttgccgct cagttaaata aagtgatgag tgatgaaatt atcatcggtg
    22381 atgatgaagc atttttcctt catcccggtg accttgcact cgcaacaacc cttgaatcgg
    22441 tttccttacc agccaatatc gttggatggt tagatggtcg ttcgtcactt gctagattag
    22501 gcttaatggt acacgttacc gcccacagaa tcgatccggg ttgggaaggc aaaattgtat
    22561 tggaattttt taatgctgga aaattacccc tagctttacg ccctaatatg gcaattggcg
    22621 cattaagctt tgagatttta agtggtgatg ctgcaaaacc ctataatgcg cgaaaagatg
    22681 caaaatataa gaaccagcaa agtgccattt caagtcggat taatcaagat taatatagta
    22741 catgccttgc aatcatacat taactatgtt agttttttaa tcagtttatt acacagtaag
    22801 gagtataact atgttacatt atgcagtcgt attttttgtc atcgctataa tcgcagcgct
    22861 attaggattt ggtggtattg ctggaagtgc tactgaaatt gccaaaattc tcttttttgt
    22921 ctttttaata cttactgtta tttcgttctt cttcaagaaa aagtgacaca gttaaaccta
    22981 attttttaag ttaaaatata gttcaaaaaa acagttggta atggatattt ataattattc
    23041 ttaccaactg ttttgctatt atatcttttt aagatgaaat gctcgtcttt tgtttcactt
    23101 tttatactgc tttttatttt tataccattt ccagcctaaa aatagaataa caatgcctaa
    23161 aatggcaaaa atgaggtgct gcccattagc tacttgttct tttagccaat ccaaattaga
    23221 tgccccatag tcgcctaaat aaacccaaat tggcacagag ataatagcgg cacagaaatc
    23281 aactaataaa aattttacga agctgacttt tctggtaata cctgaaacta agtaaaccac
    23341 cgcgcgcaag ccaggtaaaa aacgagccat aaaaagtagt ttccatcctt gtttttcaaa
    23401 acgttcttgc acggttgcaa aacgttcagg tgtcgcaaca ttcctgatta atggaaattt
    23461 gagaattttt tcgccataga ttctacctag ccagtacatt gtgctatcgc caactaatac
    23521 tcctaacata ctaacaacca gcatccaatg cacattggtg tagcctaatc ctgaaataac
    23581 accaccggat actaacgtaa tatcttcagg aatcggcaca ccgaaaccac aggcaagtag
    23641 cacaagaaaa acagcccaat aaccatagct actaaaaaat tcaatcaatg tttccatatt
    23701 actccttaat gtttaaattc cgaaccgatt tacgtttgac caattcagga aagaactcta
    23761 atactttagg ctcttttgcg ttttcgttat cttcaatacg ttctaataat aattctaatg
    23821 ctgccgagcc taagcgagat tttgactgat ggattgtcgt aagaggcggt gcataaaagc
    23881 gtgagctatg cacgttatca tacccgatca ctgaaatatc ttgcggcaca ttcagccctt
    23941 tttcggtaat agctgaaatt gcccctagtg ccattgagtc attaaaacaa aaaaccgcgg
    24001 ttggtaattt ttcactgctc ttaagcaaat tattcataca ctcatacccc ccctcaggtt
    24061 caaaatcgcc ttcttgaatc cattcttcac gaatagacaa acccgcctca gatagcgctt
    24121 ttttaaaacc ttcaaaacgg gttcttgcaa tttctttatc tctattgccg gtaattacag
    24181 caatatcttg atgcccgttt tcaattaaat gctgagtcgc aatatagcca ccttcaacac
    24241 cgtgatctaa aataatatca ctgcgttcat cacttcgtcc ccaatccata atcaccattg
    24301 ggatattgct gttttcaaag atatcaaatg aattagctgt atattcggag cacatcacca
    24361 aaatgccatc aacccgtttt ttgatgagca tatctaaatg attttgaatt ttctcaagtt
    24421 tgttttgagt attgcacaaa aatagtgaat accctttgct atagcaaaat tcctctaccg
    24481 ctaacacaat ttcagcgaaa aacggtgatt cgctggttgt aatgatcata ccgatagatt
    24541 tagtcgtatt aattttcaaa ctccgcgcta cagcactagg agaatagttc agcgctttaa
    24601 tagcctccca aactgctttt gtagtgtcct ctgctacaaa gcgggttttg tttataacgt
    24661 gagaaaccgt tgtagtcgat acaccagcat attttgcgac atcttttatc gttgccatac
    24721 ctttttcctc ctaaataagt agtggtgcat tataactgat tctaactgac ttttattata
    24781 aagaaataga tagaatgcaa gcggttgctt tttatcaaga atttgcaaaa aattttacaa
    24841 atatcaccgc ttgttaggct ttaattgcaa tcattgagcc aaaattaaag cattgaaacc
    24901 aaagttcaac ttgtgtaaaa ccagcttctt gcagacgttt tttatgggtt tcaatactat
    24961 ctgttcgcat cacattttcc aaagcattac gcttttggct gacttccaat tcactgtagc
    25021 catttgctcg tttgaatgtg tgatgaaggt cgatcaatag ctcgttcatt tcctcactct
    25081 caaaggtaaa tttttccgat aacactaaaa tgccattgga atttaatcct tgataaatct
    25141 tctgtaataa tgctaggcga tcttctcttg gtaaaaattg caaggtgaaa ttaagtacca
    25201 ccattgaagc atttttaatt tcaatgtggc gaatatcatc aagtaaaatc gtcaccggga
    25261 tctcagagtg ataagcactt aaatgggttt tacaacgctc aaccatcggc tgagaattat
    25321 ctaccccgat aatctgcaca ttcttcgcat tcacattacg gcgaatagat aaaatccctg
    25381 cgcctcgtga acaacctaaa tcataaacat ttgaattatc tgtgacaaaa cgctccgcca
    25441 acattccaat agcagtaata atattggaat agcccggcac ggagcgttgg atcatatccg
    25501 gaaacacttc agcaaccgat tcatcaaaag taaaatcgcc caatttctca atcggagcgg
    25561 aaaataatgt atctctttgc atttttctcc cttatttttc taaaaattta ttgattgctc
    25621 tcacaacagt tcctgttttt tctgcgtgaa cccaatgatc agcgtttgcc acaatgaaag
    25681 atttggcctg cggaaattgt gccaaaatcg tttgtgtatg ctctgcttga atataatccg
    25741 ataatgcacc tttaataaac aaggtcggtt tatccacaaa tacctgctgc caccccatca
    25801 cattctgata attatctttt agcgcctgta aattaaaacg gaaagattgc tcgctttggg
    25861 catcaaaaga tttcaacata aactgttgca cgccttcatc tcgaatatat tcagccatta
    25921 tcgctttagc ttgctgacga ttctggggtt tagcttcttt caccgcaaat aaggctgcca
    25981 taacctgctg atgccgattt tgggtataag tgaccggggc aatatcaatc actaccaatt
    26041 tctccaccag ttcaggagca aatgcagcca atgccatcgc actttttccg cccattgaat
    26101 gcccaaccac aatagcattt tggatattta attctgtgag taattgtgct aaatcttgtg
    26161 caatcaaagc ataattcatt tcgtctgaat gaaaagatcg cccgtgattt ctgagatcaa
    26221 ccattaaaat ggagtaacgt tctgcgaatg gttttgctat tgcgcctagg ttatttaaat
    26281 ctccaaacaa tccatgtaag aagatcatcg tctgagcatt agcatgatta ttcgaaggtt
    26341 ggtaattaaa gtttaactgc gatttttctg tcatataaat gtcattgttc atataaattt
    26401 tcagcgatgt tcctctataa aaaacaatag aaatgcgtat aatagcaagc actattaacg
    26461 catttaatac ccgcagatat ttgaggatcc cgatgaaacg aatcgaaatt gatgatgaat
    26521 tatatcagta tattgcaagc cgtacacaat ctattggtga aactgcgtca gatatattac
    26581 gccgtctatt acgcctgcca caatcgcctc agccttttgt tttagtacaa gaacacatga
    26641 tcaacgagct taaagagctt gtcaaaacgc cttctcgtgc tacgaaaaaa aatgaatcca
    26701 atgcagaaaa aaccgttgaa aaattggaaa acattttaaa ttccgagcat tttatgaacg
    26761 aaaataaaaa tgtagtgcgt tttactatgc tattagccgc attatatcga gcaaatccgg
    26821 aggcttttgc taaagcaacc gaaaaagtgc gtggtaatga acgtatctac ttttcgcaaa
    26881 gtgaagccga aattttagct actgggagtg gagtaaaagc caagcagatc ccagattcac
    26941 cgttttgggt aattaccaat aataataccg cacgcaaggg acttattctc aaaggcgtaa
    27001 tggaatccat gaaagtacca agccagttaa tcgaacgcat tcaagcgctt tttatctaat
    27061 taattgaaat gctcatcaat tctactcgct ttcctaccca attttgggct gctcattcag
    27121 cccaaaatgt ggcgattatt tgggaaaaag gaacatcaga ctatcttaac caccttccat
    27181 caaacatcac ttggtatagt ttgaatcagt tgattgcgca agctattttc gtgttgcaac
    27241 aacaaggtgc tactccgcac agtttgattg cctattgtgg ttctcatcgg ctcattggct
    27301 tgctcactta ttgtgctagc cttgctttgg gggctaagat tctaatgctt aaccctgctc
    27361 aaacagcaag tcaacgacaa gcagtcttag atgacaatgg tgttgagctc attattaatg
    27421 atgccgactt tgcaaaattt tcagcaaaaa cgaccgcttg taatgccttc cctacgattg
    27481 attttgaaaa accagctacc ctaaccctaa cctcaggctc aagcggtaaa cctaaagcag
    27541 tggtgcattc tatagcggcc catctctata gtgccgaagg agtatgtgaa ttaatggcat
    27601 ttgagcagcc aaactcttgg ctactgagct tgcctctgtt tcacgtttcc ggacaaggca
    27661 ttatttggcg ttggttattt aaaggtgcaa cactgtatgt tcacgaagac aaaagtgatt
    27721 tttttctttc agcacaaaaa gtgagccatc tctctttagt ccccacccaa ttacaacgct
    27781 atttaaacca attagattct atggtcagcc aaaaatgttt actgggtgga tctatgcttc
    27841 cagccgaatt gattgctcaa gcacaacaat ctgggatgac taccttttca ggctacggaa
    27901 tgactgagat ggcatcaacc atttgtgcag tagaaaatga tttaaacagt gttggttttc
    27961 cgttaaaaca tcgggaacta aaattagaaa atggtgaaat ttgggtaaaa ggcaaatcac
    28021 tcggcttagg ctattggcaa aaaaatgggc aaattcgacc gcttgtaaac acacaaggct
    28081 ggtttgccac taaagatcgt ggcgaatgga atcacaaaaa acagcttgta ataaaaggac
    28141 gattggataa tatgtttatt tcaggagggg aaaatatcca acctgaggaa attgaacaac
    28201 tgatttttcg ttctcagctt gtcgaacaga ttatcgtgtt gccgattgaa gataagcaat
    28261 ttggacatcg accagtggcg ttcttacaat tcaagcaatc tgattcaaaa aatgaactcc
    28321 ataaattaaa aatttggctg tctgataaat tagaaagatt caaacagcct gttgcctatt
    28381 atttactgga tatagaaaaa taccaaaaac aaggcttaat taaactatca agaacacaat
    28441 tacaacaaga tttaaaactc aaagtattaa aggaaatcta tgtttagacc gattttaaaa
    28501 acatttgtgc ttagtttagg cttaatgcta aatagttatg cattagctga attgccaacc
    28561 caacaggtag tgcaaacgca gttagatagc gccaaaaaat tagatcaagc cgatgcggat
    28621 aataaggcat tggttcaaac acttgaagat acgcttgctt tcttagccca aattgataaa
    28681 caaaaagcag ataatcaggc attgaataaa tctattcaag attcccaaaa agcattaaaa
    28741 acaagccaac ataatcttga aaaattaaaa gaggtgacta ttgcaagtgt cgataattta
    28801 acacaaaaag cgacaacaga tttacaaaaa gagttaacct ctacacaatc tcagctggaa
    28861 acagtacaac acgatttaag tattattaat aataatttag ttgcacaaaa taccgcaccg
    28921 gataaggctc aaacggcctt aaccgagatg gttaaacgta aacaggaaat tagtagccaa
    28981 ctttcagcga ctaacattaa aaatgaacta cagacaaagt tagaagtaga attagaatta
    29041 atagaattaa aaaacactta caatcaaata ttacttggtg gcagcgagga tttatctgcg
    29101 ctttactctg ctcaattaga tgaaaaaaag caagagcagc aaaatctaca agcagaaatt
    29161 gcaaacctgc agactgctat caacaataaa attgtagaag agtctcagaa caagctagat
    29221 caagcacaag cggttcaaaa tcagcaaaat aatgcaacga cgaacccagt tatcttgcgt
    29281 gaattggata taaataccaa agtcacacaa gagttgctaa aacagaccaa agatatgacg
    29341 cagttatcac aagataattt gcgaatcaaa agtgtgctag ataacttaca gcaaacccaa
    29401 cgtaatattg aagaacaaat cagttctctg caaggtacgt tggtgctttc tcgtattatt
    29461 aataagcaaa aacaatcatt accacaagat gaaatgattt ccggactatc aaaacaaatt
    29521 gcagatttac gtgtacgtgt ttttgatatc actgaattta aagactcttt tgcggacata
    29581 aatgcttata tcagccgcat agagcaagat gaaaaaacaa cctttacgag taaagagaaa
    29641 gaacaactga gtaaaatttt acaggaacgt tctgacactt taactgagat gattaaatca
    29701 ttaaataatc agctcaattt attaatcaat attgaactaa accagcaaca agtgcagacc
    29761 attagtgatg cgttacagca aaaactgcaa cagcaaagct tctgggttaa aagtaacaac
    29821 cccattgatc ttgaatggtt tagtaaattt gtcgatatta cccactatca atttattgat
    29881 attggaaaaa aactcaattt ttcaaattgg cgggataatt tattacctgc aagtatttta
    29941 gtcggaattt tattgctatt agccatcttt attaatcgcc aaaaagataa aattaaacaa
    30001 aaattacacc aaattaataa tcgactaaaa attgtcgcca cagatagcca atggaacacc
    30061 cctcttgcta ttttttggac attagtgctt tgcctgccaa gtacactaat gttcttagcc
    30121 ggatttgttg ctatcactta tatttcattt gaaaatcctc aggaagtctg gacttgggga
    30181 ttaaaaatgg caatttattg gctgtatttt gcctttttag tggcgatgct acgcccgcac
    30241 ggcataggac atattcactt taatatgcca caaaaaagta atgaaatctt ccgtaatatt
    30301 ttaaaacgtt cggtatggat cattgcttta ttactgaaca cctctatttt tacaaactta
    30361 gagatgggaa tatcttacga catgcttgga caaacaatga ctatttttgt ccttatatta
    30421 atgatttgga tgattgtacc ggcatttagg caagctattt ctacctatga gaatgtcaca
    30481 acagaagaga aaaaagaatc taaaagtatt ttactcacta ttgtcaaatt agtgctactg
    30541 cttgccccta tcattcttat cattctgatt gcattgggct attactatac tgcactggtg
    30601 atcattgagc atttagtaga ttcttatttt gcgatcatta cttggattat tattcgtaat
    30661 attctctatc gagcattctc tatttcatca cgccgtctgg cttacagacg tttacaagaa
    30721 aaaagagaag cagctgaagc caaaacacga gctaaagcag aacaaaatga tgaaaacccg
    30781 gacggtgtcg agcttccttt tgagctaaaa gaagactcta ttgccgtaag cgaagtcaag
    30841 aaccaaatgt tgaaattaac tgattttgtg ctttggattg gcttatttgt gctgctttac
    30901 tgggtttggt cggacttaat tactgttgca ctctacctag acggcgttac cttatggcaa
    30961 caaagtgtta caacagaagc cgggattgta atggaatcca ttaccctgct gaatttactc
    31021 actgctattc tgattattgt ggtaatggtg gtactcattc ggaacttatc cggtttactt
    31081 gaagccctga ttttctcgca cttcaagtta tcgcaaggta caccatacac aattaccaca
    31141 ctcttaacct atttgattat tgcgttaggg gcaatctttg cgttcggtac attagggatg
    31201 tcttggagca agctccaatg gctactaact gcactttctg tcggtctggg ttttggtatg
    31261 caagagatct ttgcaaactt cgtttcaggg attatcatct tgtttgaacg tccaatgcgg
    31321 attggcgaca ccattaccat cggcacttac agcggtacgg tttccaaaat tcgtattcgt
    31381 gccacaacct tagtcgattt tgacggcaaa gaagtgattg taccaaacaa agcattcgta
    31441 accgaacgct tggtgaactg ggcattaagc agcaccgcaa cccgcattat tgttcaagtc
    31501 ggcgtggctt acgggtctga tttagaatta gtcaaacggc tgttattaca agtggcggaa
    31561 gaaaatccga aagtcttgaa agatccacaa ccaagggctt atttccttac ctttggtgca
    31621 agcactttag atcacgaatt aagagcctat gtgaacgatt tatctgatcg taacccaact
    31681 attgatgcac taaatacacg catccaccag ctctttaatg aacataatat tgatattgca
    31741 tttaaccaat tagatgttta tatcaaaaac aacgatacac aagatgaaat taaagtagat
    31801 tcaaaacgct ttgagtttga acgaccaaat aacataacag caaaagaaaa ggaataacaa
    31861 tggcaggcaa cagcatcgga caattattta aagtgaccac tttcggcgaa tctcacggta
    31921 ttgcattagg ctgtatcgta gatggcgtac cgccgaatat ggctttaagc gaagcagatt
    31981 tacagccgga tttagaccgc cgtaaacccg gtacttcacg ctacaccacg cctcgccgtg
    32041 aagatgatga agtgcaaatt ttatcgggag tctttgaagg caaaacgacg ggaacaagca
    32101 ttggtttaat cattaaaaac ggtgaccaac gctcacaaga ctatggcgac attgccgaaa
    32161 aattccgccc ggggcacgca gattatacct atcagcaaaa atacggcatt cgagattacc
    32221 gtggcggtgg gcgttcttct gctcgggaaa ccgcaatgcg ggttgccgcc ggggcgattg
    32281 ccaaaaaata tttgcgtgag caatttggca ttgaagtgcg aggctacctc tcacaaatcg
    32341 gcaatatcaa aattgacccg aaaaccgttg aaaatattga acaaattgat tggcacgcag
    32401 tcaatagtaa tcctttcttc tgccccgatc ccgttgcgat tgaaggcttt gatgccttaa
    32461 ttcgtgagct gaaaaaagag ggcgattcgg tgggggcaaa attaaccgtg attgcagagc
    32521 gtgtacctgt agggttaggc gaacctgtgt ttgaccgcct agatgccgac cttgcccacg
    32581 ccttaatgtc gatcaacgcc gtgaaagcgg tggaaattgg cgatggtttt gcagttgtgg
    32641 aacaacgtgg tagccagcac cgagatgaga tgacgccgca aggctttctc tctaatcacg
    32701 ccggcggaat tttaggtggt attagctccg gtcagccgat tatcgctcat attgcgttaa
    32761 agccgacctc aagcattact attcccggca gaagcgtgaa caaaaacaac gaagccgttg
    32821 aagtgatcac taaaggcaga cacgacccct gtgtaggtat tcgtgctgtg ccgattgcag
    32881 aagcgatgat ggcgattgta ctactcgacc atctgttaag atttaaggct caatgccgtt
    32941 aaacacataa aattggaaaa atgaaattat taaaaacact tttagtctca agccttgctt
    33001 ttacagctac cgcactgaat gcaacgcaat gggagaaaat caaaactccg gttcaaggaa
    33061 aagcacaatc tatcggcggt tatagtaacg gctgtattat tggggcacag ccccttgcat
    33121 taaaaggcga aggctaccaa gtgatccgct cggctcgtaa ccgctattac ggacacccac
    33181 aactgctcga ttatctcact cacttaggca aaaaaaccaa agctgccggt gtgccgacca
    33241 ttttaatcgg cgatatggga atgcctgccg gtgggcgttt tgcctccggt cacgcctccc
    33301 atcaaaccgg gctggatgct gatatttggt ttaagttcgg accgatggac gatgaaaccg
    33361 cccgcaatcc agcagggctt gccaccatta tggtaaaccg tagtaccgag cgggttgatg
    33421 attcactctg gaatcaacac catactaatt tagtaaaact tgctgcaacc gatcctcgag
    33481 tggatcgcat ttttgtcaat cctgccatta aagtgaaact ctgccaaacc gcaggcaatg
    33541 atcgtgcttg gttacgcaaa attcgcccgt ggtacggaca cgactcccat ttccacgtcc
    33601 gtttaacctg cccggctgat gccgcaagtt gtgaaaatca agcccttgtg cctgccggtg
    33661 acggctgtgg tgaagagctt tactcgtggt ttgagccgaa agaagcctcc ggcacaccaa
    33721 aagccaaagt gctacccaca gcgcctgttc aatgtcagat gattttatct gaacaaggct
    33781 tgaattaatt gcaaaataac aacctttttt gaccgcttgt cagcccacaa gcggttcatt
    33841 ttcttaaata atttacgatt atgcgtttat ttgttgccga aaaacccagc cttgcccgag
    33901 cgattgccga tgtgttacca aaaccccata ccaaaggaga tggctttatc caatgcggcg
    33961 aacacgacac tgttacttgg tgtatcggtc atttattgga acaggctgaa cccgatgtct
    34021 atgatgagcg tttcaaaatg tggcgaatgg aacatttgcc gattgtgcct gaacaatgga
    34081 aattgattcc caaaaaagag acgctcaagc agtttaaagt ggtggaaaag ctgattaaaa
    34141 aagccgatgt tttagtcaat gccggagacc cggatcgaga agggcagctg ttggtggacg
    34201 aagtttttgg ctatttgaat ttatctgctg aacgcaaaag ccaaattcag cgttgtttgg
    34261 taagcgatct caacccgaat gcggtgagcc gagccattga aaaattgcaa aaaaacagcg
    34321 attttatacc gcttgcaacc tctgctctcg cccgagccag agcggattgg ctgtatggta
    34381 tcaatatgac ccgagcctat accctacagg ggcgttgggc aggctataaa ggcgtgttat
    34441 cagtcggacg tgtgcaaacg ccggtattag ggctgattgt tcgccgagat ctggagatcg
    34501 agcatttcgt gccaaaggat tattttgagg tgttggcaca gattgtcgtg ccggaaaccc
    34561 aagagcgatt taaggcgcag tggcaaccga gcaaagcctg tgaagattat caagatgaag
    34621 atgggcgggt gctgtctcgt ccattggcag aaaatgtggt aaaacggatt accgaccagc
    34681 cggcaaccgt caccgaatat caaaataaaa ttgaaaaaga aactgcaccg ctgccttatt
    34741 ctctttcggt attacaaatg gaagccgccg gcagatatgg gctatccgcc caagcggtgt
    34801 tggatatttg ccaaaagctg tatgaaaccc ataaactaat tacctaccct cgttctgata
    34861 atcggtattt gccgaccgaa catttcaacg acagatttaa agtgatggcg gcgattgctc
    34921 atcatttacc tgaatatcaa caaaaaccgg aagtgattga tgccactatt cgcaatcgtt
    34981 gctggaatga taaagaggtg gaagcccacc acgccattat tcccactgca cggcaaggga
    35041 cggtacattt aaccgaaaat gaaaaaagag tttatcaact cattgcccgc caatatctaa
    35101 tgcaattctg ccctgatgcg gaatatcgca aaagtaaaat cgggcttgaa attgcaggtg
    35161 gtagttttgt cgctcaagca cgcaaccttg taattgccgg ctggcgagcg ttactgggta
    35221 aagaagatag ccttgacgat gcagagccac tactaccgat tgtcaaaaaa gggcaaatcc
    35281 tccattgtga aaaaggggaa attgtcagca aaaaaacaca accgccccgc cactttactg
    35341 atcgcagttt gctttcagca atgaccggga tcgcccgttt tgtacaagat aaagaattga
    35401 aaaaaatctt gcgtgaaacc gatggtttag gcacggaggc aacccgagcc ggtattatcg
    35461 aattgctgtt taaacgtggt tttttaatcc gtaaagggaa aaatatccac agtaccgaag
    35521 ccggcagaat attgattcaa gcacttcccg actctgctac ccagccggat atgaccgctc
    35581 attgggaaat gcagctgaat caaatcagca aaaaagagac cagctatcag caatttatgt
    35641 ttgatctaaa ccaacagctc ccacatttat tacaaagccc aaaccgccaa gtgttgcaaa
    35701 atttagcgaa aatcacaccg cttgcaagcg gcaataaacc tcgttatttt aaaaagcgaa
    35761 cacaaactgc tgaaaattaa atcaagcagg taaaaattac tgtttagcac ttgtcaaacg
    35821 ggcgtaaatt ctatattatg cacgccattg caaatttcgc ataaagaata caagagaata
    35881 aattaatgtt aattaatgta ctcactattg tttatcttgt agttgccgta ttactgatcg
    35941 catttgtatt aatgcaacaa ggtaaaggcg ctgatgcagg tgcttctttc ggggcgggtg
    36001 cttcagcaac agttttcggc tcagcaggat cagcaaattt tttatcaaga acaactgctc
    36061 tacttgcaac gattttcttc gcaattagtt tagttatcgg taatttaagc tcacacaatg
    36121 tagcaccgaa aagccaattt gaagacttaa gccaagttga acaaaagcaa gtagaacctg
    36181 taaaaataga aaatagcgat atccctcaat aatcgcttaa cattaaaaag aataaagctc
    36241 tggtggtgga attggtagac acgccatctt gagggggtgg tggacacagt ccgtgcgagt
    36301 tcaagtctcg cccagagcac cattcaacta aatttggctc aacggagcta aactaaaaaa
    36361 gccttagaaa gcctgtaaaa tcaacattta caggcttttt tactatctta actcaacggc
    36421 tctaaacgtt tcctatcaca aattttagtt acacgtttag ttacacgttt taaatcgtgt
    36481 tactatactt tcaataatcg tgtaacactt cgtaggttta atttatggct agaacaacta
    36541 aagcattaaa taaaactcaa atagaaaatg ccaaatcaaa ggataaagaa tatattttat
    36601 ccgatggcga tggattaaat cttagagtta aacctctccc taaaggctct aaaatttgga
    36661 tttttaacta cactaaccca caaactaaaa acagaacaaa tttaactatt gggcgttacc
    36721 ccttaattac acttgcggaa gctcgcacta tatgtgatgg ctaccgctcg ttaatagaga
    36781 aaggcataga tccacaggaa gaaaaaaagc ggctgcaaca agaagcagaa aatcgagtaa
    36841 atgatacttt ccggaatgtg gccgaaagct atttcaatgg tatttataaa gagaaagcaa
    36901 aaaatccgat tactcgtgaa aagaattgga taaggttaga aaatcatatt ttcccctata
    36961 tcggggataa acacgttgaa gaaatcaaag taaaagccct tgttgatatt tattctaaag
    37021 tggcagataa aagcaacaca ttaaaaaaac tgcatcagct tgtatctgct gtaatggatc
    37081 acgccattac gcaaggcatt atagaaagcc ataactgccg attagcagtt aaaaactttt
    37141 atatcaagcc atctacgcca aatcccacta ttgagcttga agaattaccg cagttattta
    37201 ctgatttaca taatgcgaag ttatcaaagc aaacttacgc ccttgtttgt tggtcgttct
    37261 tgactgctct acgcccaaat gaagccgtta atgctgaatg gaaagaaata gactttgaga
    37321 aaaagctatg gaatatccct aaagagaaga tgaaaggaaa agcagataaa aaacgccctc
    37381 actctgtgcc gttatcctcc caagcgttaa agatattaga gatgatgaaa atgcactcta
    37441 attctagccc ttttgttttt ccaggtcgtt catcaaatag taaaccaatg agcaacgcaa
    37501 cggtaaattc aacattaaaa aggaatggat ataaagatag actaaccgca cacggtattc
    37561 gggcatttgt gaaaacattt ctatcttctc gcaaagtaga tcgccacgtt tccgaaagta
    37621 tattatccca tttattagaa ggtggagatg atttagaaaa cacatacaac cgatatgatt
    37681 ttttagaaga gcgtgtgcca gtaatgcagc ttttaggtga ttattgcgaa cagtgcggaa
    37741 tgaatttaga gttagttcgg ggttagggag gtaaaatata tgattttagt cgtcacgtca
    37801 tcacttttcc cactttcccc tttaaaatca aatagttaag tggtgatgac tggttttaaa
    37861 gtcatcatta agtcatcaca aaaaggtgat gacctagaaa aaaagagggg tttccccctc
    37921 tttgctaatt caaaatatca ctttgaaagt catcaaaatt tttgaaatga acgtttgttc
    37981 gttgcccttt attcgtcttt cgttttgtga aatcgtgctt attgccgtgt tgctttactg
    38041 cttgctcaat acctactaca aaagtattta agcctagttc tagcacattc ttagccttaa
    38101 caaaggctaa atatgccgga taaaggtgcg ttcttatttt gtcgtgtcca agcgtgttgc
    38161 cagttccgat ataaagcccg tctgtatttt ctgttgtata tagatactcg aaaaaatccg
    38221 ttaatgggtc agactgcttt ttaatctcca acgcctctag gctctctttt tgctcctcta
    38281 aggctctttt agcttcgagt gggtcaggga aggtatcaag cactttacgg ataatgcccc
    38341 ctatctctaa tgtaatttta tccataaaat acggatcacg ttcattttca ggcggtcttt
    38401 tattaaaacg gaaattgaca atccgcctat ctataccgcc attccgttct gtccatttac
    38461 aagggtcgtt attgacgatc ataatcattg ccgcaattct tgcgttaaat gggtgcttgt
    38521 tcttcggatc gactcgcacc atatcaccgc cagtaatcgc tttcaatccg ccaccatctc
    38581 cagcgtattt cgtttgctcg gaacagataa tcagcttttt atcttccagc cctgcgattt
    38641 tgcgttcatc atcaaagttt tctagccttg ctgaagctgt gttcttttct ccagctaata
    38701 gtgtcgcaat gccagcaaat accgatttac cgcttccgcc tttccctgtt acttggaaga
    38761 atacttgcca gttgtagcgg tttgttaaaa tcgcatagag agcggctaga atgttcttcg
    38821 ccttgtcttg cttgccgtct gatacaaagt taagccattg atcaaagtgt ggtgtttcgg
    38881 ctacgttctc gtcatagcta tgtggaatat aagccgttag ccagttttgg cggttaacgg
    38941 ttctttgaac atttaccgaa taaggtgggt aaggggttaa agtttcgggt tgccccttgc
    39001 tattccaacc aatcaccgta gccggttgta cttccatttt ttgaagcgtg ccgaatggtc
    39061 gggttttatc gttggctgtc gtgcgtggat aagctaagaa gcctttagct tgttttgtgc
    39121 ctgtaccgtt ggttaaatcg gtttcttcag tttcgacaaa ggattctgaa atttcttcag
    39181 tcagccagcc tagaatatct acaccaccaa agtctaaaat ctcttgcgtg gttttcgggt
    39241 aagcgtaaat attatgaacg gcaatcgtta cttcattcat tttcggggtg gcggtttcgg
    39301 tgcgtgcttc gccttcaccg atatgattta ccgctgcacc gccagccgat actaattttt
    39361 tatattcttt gccttgggtc agtttcacca cgttagcaat ttgtcgcata acagaatcat
    39421 ctgttaggcg tttcattact tgcttgtcaa gttccggaat cactgaatag ccaccgtctg
    39481 cccctccatt tgtattcgta gcaagcgaac gcaattcgcc tgttttaatc cagtggcgaa
    39541 gctcgtcatc agatactttc acatttgcgg tttcaacctg ttgccccggt tggttacgct
    39601 gttcatcagt aatcgcttca taacgtgcga tttcttttac taaattttca gcttgtgagc
    39661 ggagttcatc aaacttagcc ccttctgctt cagttgttga gcgtttttct tcgtctgctt
    39721 tggttaaaat tgaacgcatt tctgcttcaa tagccgcttt ttgttggcgg agttctaaaa
    39781 gttttttaaa cattgcctta tccttaattc aaataattga tattgtagtg aagcgttgct
    39841 gttttccacg ctgattcgtt agcatcataa tcatagctat acttagccag cacacattcg
    39901 tccatactgt ggaatgtggc ttgattcatc acatcactga ttttttgagc cactaaatct
    39961 aggtcgtttt cggttgaaaa cattggtaag taaatgccga ttttcaaata ggcgttgcat
    40021 tcgccatcgc aaagcgtgag ttggctatat tccgcttcat caatgaatac ggcgatagcc
    40081 ggtaattcat tttctacatc ggtgaatacg gctcggccgt tatggaaatg ttgaatgcct
    40141 tgaatgttac cttgtaataa gtcgataact tcttggcgga ttgcttcgtt agaaatcata
    40201 aaaaagtcct cttaattaag aaggctacaa ttagccacag aacaatatag gcataatttc
    40261 aacggagtaa atagggtaaa atttaatcgt ttagctacgt ttgaacacgt taagaggata
    40321 atttttaaat gattattttt tattcaacaa aagacaaaat ggaaggaaat aaacgaataa
    40381 ttttatagaa gtgatgactg tgactactta gtgacgactt aaaaataagt agtcactata
    40441 ttaatatgtt gatatataag ggatttttct attttag
//
LOCUS       DANLTI010000006        37769 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.006, whole genome shotgun sequence.
ACCESSION   DANLTI010000006 DANLTI010000000
VERSION     DANLTI010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 37769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37769
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.006"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            354..1712
                     /locus_tag="PXB09_000260"
     CDS             354..1712
                     /locus_tag="PXB09_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HDL5232417.1"
                     /translation="MITIKKGLDLPIAGKPEQVIHNGNTVTEVAMLGEEYVGMRPSMK
                     VREGDVVKKGQVLFEDKKNPGVVFTAPASGTVTAINRGEKRVLQSVVIKVEGDEQITF
                     ARYEASQLASLTSEQVKQNLVESGLWTAFRTRPFSKVPALDAEPSSIFVNAMDTNPLA
                     ANPEVIIAEHQQAFFDGLTVLSRLFESKKVIHLCGSADSNILNAAQSRQINNVETNRF
                     KGPHPAGLSGTHIHFIDPVGATKQVWYLNYQDVIAIGKLFTTGELFTDRVVALAGPQV
                     KNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGAIATGVHDYLGRYALQVSALL
                     EGREKAFFGMIAPYSDKYSITRTTLGHFAKKLFNFTTAVHGSERAMVPTGAYERVMPL
                     DIIPTLLLRDLAAGDTDSAQALGCLELDEEDLALCTFVCSGKNNWGPLLRQALDKIEK
                     DG"
     gene            1715..2950
                     /locus_tag="PXB09_000261"
     CDS             1715..2950
                     /locus_tag="PXB09_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HDL5232418.1"
                     /translation="MGLKNLFEKMEPAFHKGGKYEKWYTLFEAAYTIFYTPGTVTRKD
                     AHVRDAIDSKRMMLIVWLALFPAMFYGMYNVGAQGILAALKMGTLTDLVANNWHYSLA
                     DSLGSVADAGWGTKMLLGATYFLPIYLTVFAVGGFWEVVFAMVRKHEINEGFFVTSIL
                     LALIVPPTLPLWQAALATTFGVVVAKEVFGGVGKNFMNPALAGRAFLFFAYPGQISGD
                     AVWVAADGFSGATALSQWAVGGQGALQHVATGETITWMDAFLGNIPGSIGETSTLMLI
                     IGAAIIVFARIASWRIIAGVMIGMAATATLFNVIGSDTNPLFSMPWHWHLVLGGFAIG
                     MFFMATDPVSAAFTNKGKWAYGILIGFMCVLIRVVNPAYPEGMMLAILFANLFAPIFD
                     YLVVQGNIKRRLARVANNG"
     gene            2943..3716
                     /locus_tag="PXB09_000262"
     CDS             2943..3716
                     /locus_tag="PXB09_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HDL5232419.1"
                     /translation="MAKFNKDSVGGTLTVVVLLSLICSLIVAGAAVMLKPTQDIQKQL
                     DKQKNILQAAGLLQKDTNVQETYTKFIEPKIVDLATGDYVEGVTGFDARAAAKDPAQN
                     VVIAPEDDKANIKTRAKYAEVYLVKDESGKTTQVVLPMHGNGLWSIMYGFVAVQPDAN
                     TVNGITYYEQGETAGLGGEIANPNWQKNFVGKKLYNEQNQVALRVGKGASADKDHGVD
                     GLSGATLTSNGVDGSFKYWFGQNGFGPYLAKFKAAAGAN"
     gene            3716..4342
                     /locus_tag="PXB09_000263"
     CDS             3716..4342
                     /locus_tag="PXB09_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005717817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HDL5232420.1"
                     /translation="MADNNNLKKLLLSPIVDNNPIALQILGICSALAVTTQLQTAVVM
                     AIAVSLVTAFSSMFISMIRNYIPNSIRIIVQMAIIASLVILVDQILRAYAYDLSKQLS
                     VFVGLIITNCIVMGRAEAFAMKSGPVESFVDGIGNGLGYGAMLIIVAFLRELIGSGKI
                     FGITILETVQNGGWYQANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK"
     gene            4344..4940
                     /gene="nqrE"
                     /locus_tag="PXB09_000264"
     CDS             4344..4940
                     /gene="nqrE"
                     /locus_tag="PXB09_000264"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005529392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HDL5232421.1"
                     /translation="MEHLLSIFVKSIFIENMALSFFLGMCTFLAVSKKVSTAFGLGIA
                     VIVVLGIAVPANQLVYTHVLKEGALVEGVDLSFLNFITFIGVIAALVQILEMILDKFF
                     PALYSALGIFLPLITVNCAIFGGVSFMVQREYNFVESVVYGVGAGTGWMLAIVALAGL
                     TEKMKYSDVPAGLRGLGITFITVGLMALGFMSFSGIQL"
     gene            4951..6180
                     /gene="nqrF"
                     /locus_tag="PXB09_000265"
     CDS             4951..6180
                     /gene="nqrF"
                     /locus_tag="PXB09_000265"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HDL5232422.1"
                     /translation="MDSNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINNDP
                     EKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVKSGGGEILPTELSHISKK
                     EAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEE
                     VPFRAGGYIQIEAEPHTVHYKDFDIPKEYHEDWDKFDLWRYTSKVDEHIIRAYSMASY
                     PEEKGIIMLNVRIATPPPRNPDVPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAE
                     MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSEREMFYVEDFDGLQAENDNF
                     KWYVALSDPLPGDREDYFRGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGML
                     KSLGVEDENILLDDFGG"
     gene            6292..6726
                     /locus_tag="PXB09_000266"
     CDS             6292..6726
                     /locus_tag="PXB09_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5232423.1"
                     /translation="MEQLDITVLENAFNSLEKTIVSLENQAWFNRQEAIIQDTLIAGA
                     IQKFEFVYELSIKMLKRQLKNIESNDTDIDSTEFRDILRMAAQYGLIESPEVWLDYRK
                     MRNITSHTYDQNKAQQVYNGISNFLESTYFLVKQLQKRNSYD"
     gene            6719..7012
                     /locus_tag="PXB09_000267"
     CDS             6719..7012
                     /locus_tag="PXB09_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5232424.1"
                     /translation="MIDLTESQRQQVLDIFKKYLPDTPVWVFGSRIKGTAKAYSDLDL
                     ALITKQPLTIRQQTELELAFTDSDLPFTVDLIDWASCNESFKQIILQRYEVLI"
     gene            7061..8095
                     /locus_tag="PXB09_000268"
     CDS             7061..8095
                     /locus_tag="PXB09_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDL5232425.1"
                     /translation="MKKFFLLLIAFFTLSACEKAPEQITLSGKTMGTTYTVKYIDNGE
                     VENLISPEKMKNELDGLLIEVNNQMSTYQQDSEISRFNQAKQANQAVEISQDFAKVVQ
                     EAIRLNKVTEGALDVTVGPLVNLWGFGPDKRLNKVPSDEQIAERSAYVGIDKILLEMS
                     SKPKLTKSAANLYLDLSSIAKGFGVDKLAEHLETIGVSNYLVEIGGELRGKGKNLQGL
                     DWRIAIEKPVMTQGQAAQITVPLHNLAMATSGNYRNYFEDEKGNRLSHIIDPKQLRPV
                     NHNLASITVFAPTTMTADGLSTGLFVLGAEKALAVAEREKLAIFLIVKNGDKFETQMS
                     SEFSKLIQSQ"
     gene            8108..8353
                     /gene="nqrM"
                     /locus_tag="PXB09_000269"
     CDS             8108..8353
                     /gene="nqrM"
                     /locus_tag="PXB09_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HDL5232426.1"
                     /translation="METVLLTFGFFVAVIFAMSIGFIVKGKTIKGSCGGITALGMKKM
                     CDCEEPCDNLKSKIADGTADPEEVARFNKEPQFYEVK"
     gene            8355..8771
                     /locus_tag="PXB09_000270"
     CDS             8355..8771
                     /locus_tag="PXB09_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5232427.1"
                     /translation="MNRDIRWKQRFDNYKKSVSYLQAEAEKYADTDIDVIKKGIIQSF
                     EITHELAWKLMQDILKWEGEVDIYGSKTASRLAFNRGLITQGEVWLEMIKSRNITVHT
                     DDETILTEEFNKIIKAYLPLFIEFEQRVETLCQTLD"
     gene            8753..9064
                     /locus_tag="PXB09_000271"
     CDS             8753..9064
                     /locus_tag="PXB09_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5232428.1"
                     /translation="MPNFGLSERATKTITDILAKYPEVEQAIIYGSRAKGNYREGSDV
                     DLTFKGKDLTYDIVKRIWGDLDDSDSPYLFDLSIYHQLTNANFIEHIDRVGKVFYQRE
                     L"
     gene            9175..10338
                     /gene="mnmA"
                     /locus_tag="PXB09_000272"
     CDS             9175..10338
                     /gene="mnmA"
                     /locus_tag="PXB09_000272"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDL5232429.1"
                     /translation="MTTQLTSKTYDTHFPKLTPEQLAENSKKKVIIGMSGGVDSSVSA
                     FILQQQGYQVEGLFMKNWEEDDDTDYCTAAAELADAQAVADKLGMKLHKINFAAEYWD
                     NVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRTSDDQD
                     AKLLRGLDENKDQSYFLYALNKKQIGQSLFPVGEIEKPIVRAIAEDLGLATAKKKDST
                     GICFIGERKFKDFLARFLPAQPGEIRTVEGKLVGRHDGLMYHTLGQRKGLGIGGVKGL
                     SEDPFYVVEKDLINNVLIVAQGHDNSALLSSGLIAKQLTWVDMQPLRENLRCTVKTRY
                     RQADIACEIQVIDDETIRVMFDEPQIAVTPGQSAVFYLGEVCLGGGIIESQLK"
     gene            10455..11834
                     /gene="argH"
                     /locus_tag="PXB09_000273"
     CDS             10455..11834
                     /gene="argH"
                     /locus_tag="PXB09_000273"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDL5232430.1"
                     /translation="MALWGGRFTQQADAKFKYFNDSLRFDYRLAIQDIEGSIGWAKAI
                     TSVGILTVAELEQLIAALKEVRAEVESNLTIILKDDAEDIHSWVESKLIEKVGDLGKK
                     LHTGRSRNDQVAVDIKMWCKVQAVALQERIRALQERLVSVAEENQESVMPGYTHLQRA
                     QPVTFAHWCMAYYEMLERDFSRLSDANKRMSTCPLGSGALAGTAYGIDRDLLARDLGF
                     EEATRNSLDSVSDRDHILELLSTASISMMHLSRFAEDLIIFNSGESGFLEMSDRVTSG
                     SSLMPQKKNPDACELIRGKSGRVFGALNGLLTTLKGLPLAYNKDMQEDKEGIFDALET
                     WQACLEIAELVLVDIQVNTERTREAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VYAISKKEPLEALSINEFQQFHHSIGDDVYPILSLESCLEKRCAKGGVNPQRVAEAIA
                     VAKANLASK"
     gene            12002..13000
                     /locus_tag="PXB09_000274"
     CDS             12002..13000
                     /locus_tag="PXB09_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HDL5232431.1"
                     /translation="MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSH
                     IESLENDIFILQNVAPTFVRGYVRNYVKFLRLPESLISSVNYGEVTIPKEVTKVSSVK
                     PSSNSQGKTLKYLTVLVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATN
                     NDASAQTSVPVQQPIQVSEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVE
                     EVKQADATTAQVEAVNVLQQSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNK
                     RLAEKLYNNGETLSFNENEQYRLTIGAPANVKVYYKGQEVPLKIDGRVARIHLPLQ"
     gene            13101..14213
                     /gene="ispG"
                     /locus_tag="PXB09_000275"
                     /gene_synonym="gcpE"
     CDS             13101..14213
                     /gene="ispG"
                     /locus_tag="PXB09_000275"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDL5232432.1"
                     /translation="MIHQSPIKRRVSKKIYVGNVPVGGDAPITVQSMTNTRTTDVEAT
                     VAQIKSLERVGADIVRVSVPTMDAAEAFKAIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRTVVDCARDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLES
                     ALRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARAGSV
                     KSAVGLGLLLAEGIGDTLRVSLAADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EIDVIATVNELEQRLEDIITPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGV
                     RQKERFDNAKLIDQLEAKIRARVAQQHNRIDIEQIG"
     gene            14219..15490
                     /gene="hisS"
                     /locus_tag="PXB09_000276"
     CDS             14219..15490
                     /gene="hisS"
                     /locus_tag="PXB09_000276"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDL5232433.1"
                     /translation="MAKTIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMP
                     IVESTPLFARAIGEVTDVVSKEMYTFWDNDEQLTLRPEGTAGCVRAAIERGWIYNNEQ
                     RLWYMGPMFRHERPQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGIDQHV
                     SLQLNSIGSLEARANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQNVL
                     NDAPKLLDYLDDDSREHFTQLCALLDAMGIRYEVNPKLVRGLDYYNKTVFEWVTSALG
                     SQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEIDLPKTVDVYIVF
                     SGEGATLNAFQLAEQIRSELPHVGVMTHCSGGKFQKQFKRADKVEAQIALVIGESEVA
                     EKQVVIKDLRSGAEQITIAQSELIAELSKRF"
     gene            15500..16120
                     /locus_tag="PXB09_000277"
     CDS             15500..16120
                     /locus_tag="PXB09_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDL5232434.1"
                     /translation="MSNEYLNKTEEQQFEDAKNWFKENGTPILVAIILACAATAGWNF
                     WKNHQLETAQKTSASYQSVMESYLQNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQA
                     VEKGNFSAAKTALQSVLTYSDSTLQSIARFRLAQIDFQLKSYDEALASLAQIQDKAWE
                     LRKQILTGDILAAKGDIPAAKSAYEQAKTTANPQEQTLIDVRLNNL"
     gene            complement(16183..17286)
                     /gene="dnaN"
                     /locus_tag="PXB09_000278"
     CDS             complement(16183..17286)
                     /gene="dnaN"
                     /locus_tag="PXB09_000278"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDL5232435.1"
                     /translation="MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSL
                     TGTDLEVELTTQAQLLQAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEEDKAIIKA
                     GRSKFSLATLPASDYPNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMK
                     FETEGNLLRTVATDGHRLAVCTMVLNQELLTHSVIVPRKAVLELSRLVASNDETVRLE
                     IGSSNIRITMNGIVFTSKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSN
                     EKFRGVRLTLSNNLLKITANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKC
                     QRVRFSLVDSSSSCLIEDCDNSSAEYVIMPMRL"
     gene            complement(17305..18654)
                     /gene="dnaA"
                     /locus_tag="PXB09_000279"
     CDS             complement(17305..18654)
                     /gene="dnaA"
                     /locus_tag="PXB09_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDL5232436.1"
                     /translation="MEQIVSSLWSDCLNHLQTKVSPTDYSTWLRPLQASSENGELTLY
                     AQNQFVENWVKDKFLSEITELARFLAKNDNLVVTLKVGIKPTEQPKVSPNLKNESSEF
                     SNTGFKTGLNPNQTFDNFVQGRSNQLAKLVAQQVVDNLGESHCNPLSFYAGTGLGKTH
                     LLHAIGNELVKRTPGTRVLYIHLERFYRDIIKAINSSNNDAEKIKKFYRSLDVLMIDD
                     IQFLANKPKVQEEFLHLLNALFEQRKQIILTSDVLPKNIDKIDTAIKSRLSGGISATI
                     EPPELETRVAILRQKALERGADLQEDAAYLMGQKLRTNVRELEGALNRVIAWQKLTLR
                     PITVDAVRETLQDLFASFDYLITIENIQRIVAEYYGIKVADIKSKSRARSIARPRQMA
                     MALAKELTNHSLPEIGREFGGRDHTTVMHACKTINELRDTESGIQEDYIHLTRKLSS"
     gene            complement(18841..20688)
                     /locus_tag="PXB09_000280"
     CDS             complement(18841..20688)
                     /locus_tag="PXB09_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232437.1"
                     /translation="MFEKLFKWFEARVETYPNEMPKTPKSGLIPFIYDATKGMRFYIL
                     LLTVLVAAVGIIEAVLFRFMGDLVDWVNKYSPTELWAEKGWTIIGMFFIALLAVVFVY
                     LASSIRFQSLQGVFPMRLRWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALSVRDVIM
                     TCADMLVYVLVYFTTSSVILLQLDGWLFVPFILWVISLAATIIYFVPKLAQAAQEQSD
                     ARSLMTGRITDAYANIATVKLFSHGNRESAYAKESMEGFMVTVHKQMRLVTVIETVTN
                     LTSMALIISTAGIGLWLWGSSVVTAGAIATSTALALRIKGLSQWIMWEFARLFENLGT
                     VQDGMITLSKPHNVVDKIDAKPLNVTKGEIKFENVDFAYDPKKPLLKDFDLTIKPGEK
                     VGLVGRSGAGKSTLTNLLLRFYDIQDGSITIDGQNIRDITQESLRSQIGLVTQDTSLL
                     HRSVRENLMYGRPNATEEEMIKAVEQAAASEFIPNLQDAKGRTGFDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQENLTQLMEGKTVVAIAHRLST
                     IMAMDRLIVLDKGEIVEQGTHEELLAQNGVYARLWAHQSGGFLPENTDI"
     gene            complement(20757..21266)
                     /gene="luxS"
                     /locus_tag="PXB09_000281"
     CDS             complement(20757..21266)
                     /gene="luxS"
                     /locus_tag="PXB09_000281"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDL5232438.1"
                     /translation="MPLLDSFKVDHTKMNAPAVRVAKTMTTPKGDTITVFDLRFCRPN
                     IDILPVRGIHTMEHLFAGFMRDHLNSEQVEIIDISPMGCRTGFYMSLIGSPSAEEVVK
                     AWTASMEDALHKIPDVSAIPELNEYQCGSYKEHSLKEAHQIARNVLAAGIGINRNEDL
                     ALDEKLLNP"
     gene            complement(21284..23950)
                     /locus_tag="PXB09_000282"
     CDS             complement(21284..23950)
                     /locus_tag="PXB09_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDL5232439.1"
                     /translation="MTMEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLFFQILK
                     EQGETITIRFSKGDGITAGKTAIRYQGLQIGQVKRVYFVDNLKEVEVQAEINPEAKSI
                     LRKQTKFWLVQPSASLAGVSGLDAIVSGNYITLLPGEGDFVDEFIAEEDPPAITVSDG
                     DLLIRLISDDIGSITVGASVYFRKVPVGNIADYRFTKDQKKIEIDVVINQKYAHLVKK
                     ESRFWNISGISADVNLQGIKINMDSLASVVQGAVAFDSPDNMEIAEQGQKFELYPDLK
                     SAKRGIEINVKLPLTHNLKINETGVFHQNVQIGMLSQLKLPQVKDNGVPQQESGQHKQ
                     IDGVLLIDPSYENLLRSQTKILLKEPKFSLNTEQLTKVGELLRGVYFEVHPGEGEPQS
                     EFVVQNEADYLLSLPNLLSFSLIAPQAYGVDTNQGIYYSDVQIGEIVKRSLELDKVRF
                     DVIIYPPYRNLIGSNSKFVAISNIDMSVGLDGLRVHAGSPSEWLKGGVRLINGKNDGS
                     PKKQYALYKDIESAESGMATLDKKATTTLSADSLSGISEGSLVLYRDFQVGEVLKITP
                     KQQKFEVELFIQPNYRHLLTEKSRFWIEPATSVDVSLKGVNITTAPLMRTLKGAISFD
                     DGGSKGNKTLYASKEKATSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQNA
                     KKQIKATAYIQRKYYPLIAKAGSKFNVISPEISTSGFKNLDAALQNYITVDVGSGQAQ
                     NQFVLADTDTVKTTYANGFPIIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDR
                     VLIYVNIQDKYKHLVRTNTQFWQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYT
                     KVVKPQAQPNRRFFLQRKLPDEAPAWDQGIAE"
     gene            complement(24033..24473)
                     /gene="fur"
                     /locus_tag="PXB09_000283"
     CDS             complement(24033..24473)
                     /gene="fur"
                     /locus_tag="PXB09_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDL5232440.1"
                     /translation="MSEANIKRLKEVGLKVTEPRLTILALMQDIRDEMQHFAAEDIYK
                     ILLEKGSDIGLATVYRVLNQFEEAGILTRHNFDANKAVFELNMNHEHDHIICMDCGKV
                     FEFKDPDMERRQREISEKHGMELTNHSLYLYGKCSNLTNCDEKK"
     gene            complement(24509..25033)
                     /gene="fldA"
                     /locus_tag="PXB09_000284"
     CDS             complement(24509..25033)
                     /gene="fldA"
                     /locus_tag="PXB09_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDL5232441.1"
                     /translation="MAVVGLFYGSDTGNTENISKMIQKKLGAELIDIRDIAKSTKEDI
                     EAYDFLMFGIPTWYYGESQADWDDFMPTLKEIDFNGKVVAIFGCGDQEDYAEYFCDAM
                     GTVRDVVEPNGGVIVGHWPTAGYTFEVSQALVDDDTFVGLCIDEDRQPELTTERVNKW
                     CEQLKEEMCLDQLA"
     gene            complement(25039..25314)
                     /gene="ybfE"
                     /locus_tag="PXB09_000285"
     CDS             complement(25039..25314)
                     /gene="ybfE"
                     /locus_tag="PXB09_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDL5232442.1"
                     /translation="MAKQDSDCITLDLFATVPKVGRPRTNPLDREQQLRINKRNQLKR
                     DKSSGLKRVELKLHSNLVKLLEEQASEQGVSRGQLIETILNNYLTNR"
     gene            25555..26541
                     /locus_tag="PXB09_000286"
     CDS             25555..26541
                     /locus_tag="PXB09_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5232443.1"
                     /translation="MSNIHLAIAADFTLAEKLLEALANQDLGIENISAVELEPFGEEQ
                     NLRFGAKAVAQYALDEVNWAEFSHVLFAGKMAQAEVLAEAVKAGCVILDLYGITALIG
                     DVPVVVPSVNDENVANLRERNIVALANPQISQLALALKPLLNEPLKQVWVTSLLPSAY
                     FGDEKVKELAGQTARLLNGIPFDENAERIAFDVVPANVQGEEKSLPFSKAFELQIAKV
                     LPNLTACTTFHSVQVPVFYGVSQMVSVQSEYQLDANALSEAWKAENWLNFNENSVITA
                     VKNGENEEQNALEISQLLAKSEQEVQFWTVADEQRFSLAFLAVKLLKLVLAY"
     gene            26638..27933
                     /locus_tag="PXB09_000287"
     CDS             26638..27933
                     /locus_tag="PXB09_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5232444.1"
                     /translation="MLEKLFQLKAKGSNVKTEIIAGITTFFTMVYIVFVNPSILGVAG
                     MDTQVVFVTTCLIAAFGTIAMGLFSNLPIALAPAMGLNAFFAFVVVQKLGYSWQVGMG
                     AIFLGSVGLFLLTVLQVRYWFMSAIPLGLRVGIGAGIGLFIALIGFKNMGLVVPNPAT
                     LVALGDLHDPKVLMGILGFFIIVVLAAKGIHSGVLISIVIVTALALAFDPAVSFNGIM
                     SMPPSLGAVVGQVDIAGAFDVALLGMIFSFMLVNLFDSSGTLIAVTTKAGFADEQGRF
                     PKMKQALLVDSTAAMAGSYMGTSAISTYIESGSGVSVGGRTGLTAVVVGILFLLTIFF
                     SPLAGLVPAYATAGALVFVGILMASSLIEVKWDDLTEATPAFITTAMMPFTYSITEGI
                     AFGFISYCVMKAFTGRWKEINLSVLVVSLLFIAKFVWVG"
     gene            28053..28421
                     /locus_tag="PXB09_000288"
     CDS             28053..28421
                     /locus_tag="PXB09_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HDL5232445.1"
                     /translation="MSNSVQKLLFIINSAPYGNETFFSALRLALQIQEQHKANTEIKL
                     FLMSDAVTAGLAKQNPAEGYHIQQMLEILTAQGANVKLCKTCTNARGITDLPLADGVE
                     IGTLIELADWTIQADKVLNF"
     gene            28421..29614
                     /locus_tag="PXB09_000289"
     CDS             28421..29614
                     /locus_tag="PXB09_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5232446.1"
                     /translation="MQNIDVVVIGAGAAGLFCAAQLGQAGKKVVVLDSGKKVGRKILM
                     SGGGFCNFTNLDVSAGNYLSQNRHFVKSALSRYTQWDFISLVSHYGISYHEKELGQLF
                     CDESSQQIVDLLQAECNKGKVEILLRQAVISVEKVANFFEISTACGKFQSEHLVIATG
                     GLSMPALGASPFGYQLAEQFGIPVVPPRASLVPFTWKESDKYFAELSGIALPITVSAN
                     GKSFSNQMLFTHRGLSGPAILQISNYWELGETVEIDLLPSQSITDILSELRQSSPKLQ
                     LKTVLSRYLPKKLVEVWLEQKLLTDKVIADLSKKDLTLLEQFIHHWHFLPNGTEGYRT
                     AEVTKGGVDTDYISSKTMEAKNTAGLYFIGEVLDVTGWLGGYNFQWAWSSAFACAEGI
                     IEKSK"
     gene            complement(29685..29903)
                     /gene="infA"
                     /locus_tag="PXB09_000290"
     CDS             complement(29685..29903)
                     /gene="infA"
                     /locus_tag="PXB09_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDL5232447.1"
                     /translation="MAKEDCIEMQGTILETLPNTMFRVELENGHIVTAHISGKMRKNY
                     IRILTGDKVTVEMTPYDLSKARIIFRAR"
     gene            complement(30013..30672)
                     /locus_tag="PXB09_000291"
     CDS             complement(30013..30672)
                     /locus_tag="PXB09_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDL5232448.1"
                     /translation="MYISREKITKTLLLAGITLLCCGIVAVILMGVNQFKLGSQLASI
                     NQVSNLSHLLVRQQANIFSFLLVKNAKTDELVDALDSFAKEDFIIDANIYSPNGVLLA
                     QSQNAKDLKVLLDSEQSAKTQQIVEPIFSQQALVGFLRVTFDAEYGQTTKARVEQQFH
                     QLYGEIIILLLTGILLASSINYYFRRKIHHVQISPKPLMSQVKTQTQRFHSRRRWIKR
                     K"
     gene            30758..31621
                     /gene="serB"
                     /locus_tag="PXB09_000292"
     CDS             30758..31621
                     /gene="serB"
                     /locus_tag="PXB09_000292"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDL5232449.1"
                     /translation="MTNTIFIYSKTLNEREIEQFSQQTAAILLKQAVYLDYKIAFFST
                     NLTACELRETAQKINADISDLTIIPTLNQGGLLLMDMDSTAIKIECIDDIAKLAGTGE
                     VVSAITASAMRGELDFEQSLRKRVGTLENASESILQKVRENLPLMDGFEQMVAILKEH
                     GWKLAIASGGFDYFADYLKQKYGLNFAVSNQLEIIDGKLTGKVLGKVVDAQHKADTLQ
                     NLATTFNIPPNQWVAVGDGANDLPMLKTASLGVALHAKPKVQAQADFVVNFGDLTALC
                     LLLNANHLFQH"
     gene            31637..32128
                     /locus_tag="PXB09_000293"
     CDS             31637..32128
                     /locus_tag="PXB09_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDL5232450.1"
                     /translation="MPSFDIVSEITMHEVRNAVENANRVLSTRYDFRGVEAVIELNEK
                     NESIKLTTESDFQLEQLIEILIGSCVKRGIEHSSLDIPTESEHHGKLYSKEIKLKQGI
                     ESDMAKKITKLIKDSKIKVQAQIQGEQVRVTGKSRDDLQAAIQLVKGADLGQPFQFNN
                     FRD"
     gene            32213..32389
                     /locus_tag="PXB09_000294"
     CDS             32213..32389
                     /locus_tag="PXB09_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5363 domain-containing protein"
                     /protein_id="HDL5232451.1"
                     /translation="MMSEQTEKKGWFKKALEKYDAFCDELGVNQGACRGCVPVVKFDP
                     EPEKEQPEKSENKT"
     gene            complement(32437..32733)
                     /locus_tag="PXB09_000295"
     CDS             complement(32437..32733)
                     /locus_tag="PXB09_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232452.1"
                     /translation="MKKHHIIILTLASASVVACSSNTPVQVVNGDKNIDYSQPKTIYI
                     SETNTQPPALTKQEKIKPSNATALCFNGSYSTDIQNPCKKDGGVKQYFAHHHAN"
     gene            complement(32810..33778)
                     /gene="mdh"
                     /locus_tag="PXB09_000296"
     CDS             complement(32810..33778)
                     /gene="mdh"
                     /locus_tag="PXB09_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDL5232453.1"
                     /translation="MCQSKKVALLGAAGGIGQSLALLLKLNLPAKSELSLYDISPVTP
                     GIAVDLSHIPTDVKVTGFAGEDPTEALKDADVVVISAGVARKPGMTRADLFNTNATIV
                     HNLVEKAAKVCPKACIAIITNPVNTIIPIAAEVLKKAGVYDKNKLFGVTTLDVIRANT
                     FVAEAKDVNVKYVRVPVIGGHSGTTILPLLSQATVNGLKLEFTQEQIEQLTHRIQNAG
                     TEVVEAKAGGGSATLSMAQAGAEFALGLVRALIGEDVIRYAYVDNANGETSPAFFAYP
                     IRLGTNGVEKVLPIGNLSEFEKDQLEQLIPVLNDEIQLGQTFNKNA"
     gene            33974..34435
                     /gene="argR"
                     /locus_tag="PXB09_000297"
     CDS             33974..34435
                     /gene="argR"
                     /locus_tag="PXB09_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDL5232454.1"
                     /translation="MDKIDSLSEAFKSLLKEEKFGSQSEIVAALQEMGFDNINQSKVS
                     RMLSKFGAVRTRNPKMEMVYQLPVELSVPTTSSPLKNLVVDIDHNDALIVVKTSPGAA
                     QLIARLLDSMGKAEGILGTIAGDDTIFITPVRNVQIEKLVKNVTQLFETSL"
     gene            34485..35381
                     /locus_tag="PXB09_000298"
     CDS             34485..35381
                     /locus_tag="PXB09_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDL5232455.1"
                     /translation="MHIFITGGTGFIGRELIQQLKSENHHFTLLTRDTEAKSDDLQIN
                     YCYSLDELVDLNDFDAVINLAGEPIFDKRWTDEQKQKLIESRVNLTNKLSQLMNASSN
                     PPHTFLSGSAIGIYGDLPPSANFYTESTACYQDCFTNRLCQQWEAAALKAASDKTRVC
                     LIRTGTVFSPEGGALKKILPLYRCGLGGKLGSGKQYWAWISRRDHVQAVIFLLKNANC
                     SGAYNFVAPNPVRNEEFNRILANAVNRPAFFTVPEFALKLGLGERACLVLDNQQLIPE
                     KLLAASFVFQDPILTENVFLNP"
     gene            35426..37624
                     /gene="uvrD"
                     /locus_tag="PXB09_000299"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             35426..37624
                     /gene="uvrD"
                     /locus_tag="PXB09_000299"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDL5232456.1"
                     /translation="MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIA
                     WLIGVENVPESNILAVTFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLL
                     RSHYLDADLPQDFQIMDTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRA
                     KDIDHYNDPNEKKLVEIYQIYQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRF
                     QQILIDEFQDTNNIQYDLIRLLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYD
                     NAQTIRLEQNYRSTGNILSCANELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEA
                     RFVASQIKQWKEDEGDLAECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
                     KDALAYLRLIANRQDDAAFERVINTPTRGIGDRTLDTLRQITRGRQITLWQAIQVAVQ
                     EEQLSGRATSSLLRFVELINALDQETEQMSLAEQTDFVIKKSGLYEMYKQEKGEKGEV
                     RIENLEELVTATKQFVKPDEAEELTDLTAFLTHASLEAGEAQASQHEDYVELMTLHSA
                     KGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAESRRLY
                     GKEERHVPSRFIAELPEEHIREVRLRGSINRAASFNQANSFAKNPTKTTASFLNDDTW
                     KMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIKWLIAKMANLERI"
BASE COUNT        11143 a         7243 c         8241 g        11142 t
ORIGIN      
        1 tgttaataaa atttaaccgc ttgaagggaa attggattaa ctaattatgg ttaatttatg
       61 ttaagaggga attgaaatct tgatttattt caaattttac cgcgggaata tgcaaaaaat
      121 agggggtttt cctagccaga aggggagctt tttaggtaaa ataagaagat tatttttagt
      181 taaccttttg ttaagaaaag ataaaggttg atcacagatt tgagaactta atgtggcttt
      241 taaaaatagg tgggggacca ttgtttattt ttaagtaaag ctgcggctca atagaagcga
      301 ttgcgttagc gcaatcatat tttttaaccc aaaagaaaag tagtgcaaac aatatgatta
      361 caatcaaaaa aggcttagat cttccgattg cgggaaaacc tgagcaagta atccataacg
      421 gtaataccgt tactgaagtt gctatgcttg gtgaagaata tgtgggtatg cgtccttcaa
      481 tgaaagtgcg tgaaggcgat gtagtaaaga aaggtcaggt tctttttgaa gataaaaaga
      541 atccgggcgt ggtatttact gcccctgcaa gtggtaccgt aacggcaatt aaccgtggcg
      601 agaagcgtgt tcttcaatcg gtagtaatta aagttgaggg tgatgagcaa attacctttg
      661 ctcgttatga agccagccaa ttagcttcat taacttcaga gcaagtaaaa caaaaccttg
      721 tagagtcagg cttatggacg gctttccgta cacgtccgtt tagcaaagtg cctgcattag
      781 atgcagaacc ttcctctatt tttgtcaatg cgatggatac caatccactt gcagcaaatc
      841 cggaagtgat tattgcagaa caccaacaag ctttctttga tggcttaact gtattaagtc
      901 gtttatttga aagtaaaaaa gtgattcatc tctgtggcag tgcagactca aatattttaa
      961 atgcggcaca aagccgtcag atcaataatg tggaaactaa ccgctttaaa ggtccgcacc
     1021 ctgcaggtct ttctggtacg catattcact ttattgaccc ggtaggtgca actaaacaag
     1081 tttggtattt aaattaccaa gatgtaattg ctatcggtaa attatttacg accggtgagc
     1141 tatttactga ccgtgtagtc gcattagccg ggccacaagt gaaaaatcca cgtttggtgc
     1201 gtactcgttt aggggcgaat ctttcacaat taacagccaa cgaattaaat gcgggtgaaa
     1261 accgtgtcat ttcaggttct gtgttaagtg gtgctatcgc aacgggagta cacgactatt
     1321 taggtcgtta cgcattacaa gtgtctgctt tattagaagg gcgtgagaaa gcgttcttcg
     1381 gtatgattgc tccttactct gataagtatt caattacgcg tactacttta gggcattttg
     1441 cgaagaaatt atttaacttc acaacagcag ttcacggtag tgagcgtgca atggtaccaa
     1501 caggggctta tgagcgtgta atgccgttgg atatcattcc aacactctta ttgcgtgatt
     1561 tagcagctgg agatacagac tccgctcaag ctttaggctg cttagagtta gacgaagaag
     1621 atttagcgtt atgtactttt gtgtgttccg gtaaaaacaa ctggggacca ttattacgtc
     1681 aagcgttaga taagatcgag aaggacggtt aaaaatgggt ttgaaaaatc tttttgaaaa
     1741 aatggaaccc gctttccata aaggtggaaa gtatgagaaa tggtacacgc tatttgaagc
     1801 tgcctatacg attttctata caccgggtac ggtcactcgt aaagatgctc acgtgcgtga
     1861 tgcgattgac tctaagcgta tgatgttaat tgtatggtta gcgttattcc ctgcgatgtt
     1921 ctacggaatg tacaatgttg gtgcacaggg tattctagcg gcactcaaaa tgggaacatt
     1981 aacggattta gttgctaaca actggcacta cagcttagcc gatagtttag gctctgtagc
     2041 tgatgcaggc tggggaacta aaatgttgct gggggcaacc tatttcctac caatctactt
     2101 aacagtattt gcagtgggcg gtttctggga agtggtgttt gcaatggtgc gtaagcacga
     2161 gatcaacgaa ggtttctttg taacctctat cttactagca ttaattgttc ctccaacatt
     2221 accgttatgg caagcagccc ttgcaactac ctttggtgtt gtggtcgcaa aagaagtgtt
     2281 cggtggcgtg ggtaaaaact ttatgaaccc tgcgttagcc ggtcgtgctt tcttgttctt
     2341 tgcttacccg ggtcaaattt caggtgatgc agtatgggtt gccgcagacg gcttctcagg
     2401 tgcaactgca ctttctcaat gggcagttgg tggtcaaggt gcattacagc acgttgcaac
     2461 cggtgaaacc attacttgga tggatgcgtt cttaggtaat attccgggtt ctatcggcga
     2521 gacctctacc ttaatgttga ttattggtgc tgcaatcatt gtatttgccc gaattgcttc
     2581 ttggcgaatt attgccggtg taatgattgg tatggcggca actgcgacat tatttaatgt
     2641 aatcggttct gataccaacc cattattctc tatgccttgg cattggcatt tagtattagg
     2701 cggttttgcg atcggtatgt tctttatggc aaccgacccg gtatcagctg catttaccaa
     2761 caaaggtaaa tgggcatacg gtatcttaat cggctttatg tgtgtattaa tccgtgtggt
     2821 aaacccagca taccctgaag gtatgatgtt agcgatctta tttgctaact tatttgctcc
     2881 aatctttgac tatttagtag ttcaagggaa tatcaaacgc agattagcga gggtagcaaa
     2941 caatggctaa atttaataaa gatagcgttg gcggaacgct aaccgttgta gttttattaa
     3001 gtttaatttg ttctttgatt gtggcaggtg cggcagtaat gcttaaacca acacaagata
     3061 ttcagaaaca acttgataaa cagaaaaaca tcttacaagc ggccggttta ttgcaaaaag
     3121 ataccaatgt gcaagaaacc tataccaaat ttattgagcc gaaaattgtc gatttagcaa
     3181 caggtgatta cgttgagggt gtaaccggtt ttgatgctcg tgcagcagct aaagatcctg
     3241 ctcaaaatgt agttatcgca cctgaagatg ataaggcgaa tatcaaaacg cgtgctaaat
     3301 atgctgaagt ttatttagta aaagatgaat ctggcaaaac gactcaagta gtattaccaa
     3361 tgcacggtaa cggcttatgg tcaattatgt acggtttcgt tgcggtacaa cctgatgcaa
     3421 ataccgttaa cggtattact tactatgaac aaggtgaaac ggcaggctta ggtggcgaaa
     3481 ttgcaaaccc gaactggcag aaaaactttg taggtaaaaa actgtataac gagcaaaacc
     3541 aagttgcgtt aagagtgggt aaaggggcat ctgcagataa agatcacggt gttgatggtt
     3601 tatctggtgc aacattaacc tcgaacggtg ttgatggttc attcaaatac tggtttggtc
     3661 aaaatggttt tggtccatat ttagcaaaat ttaaagcagc ggcaggagct aactaatggc
     3721 agacaataac aatcttaaaa aattattgtt atcgccaatt gtcgataaca acccgatcgc
     3781 attacagatc ttaggtattt gttctgcgtt agcggtaacg actcaattac aaacagcagt
     3841 agtaatggcg attgcggtaa gtttagttac tgcattctca agtatgttca tttcaatgat
     3901 tcgtaactat attccaaata gtatccgtat cattgtgcaa atggcgatta ttgcatcatt
     3961 agtaattttg gttgaccaaa tcttacgcgc ttatgcttac gatctgtcaa aacaattatc
     4021 ggtattcgta ggccttatta ttaccaactg tatcgtaatg gggcgtgcag aagcattcgc
     4081 gatgaaatca ggcccggttg aaagttttgt tgatggtatc ggtaacggtt taggctacgg
     4141 tgcaatgtta attatcgttg cctttttacg tgaacttatc ggttcaggta aaattttcgg
     4201 tatcaccatt cttgaaactg ttcaaaatgg cggttggtat caagcaaacg gtttattctt
     4261 attagcacca agtgcgttct ttattatcgg atttgtgatc tgggcgatta gaacgtggaa
     4321 accggaacaa gtggagaaat aagatggaac atcttctgag tatctttgtt aagtccatat
     4381 ttattgaaaa tatggcactt tctttcttcc ttggtatgtg tacattcctt gcggtgtcta
     4441 agaaagtttc aactgctttt ggtttaggta ttgcggtaat tgtagtactt ggcattgcag
     4501 ttccagctaa ccaattagtt tatacccacg tattaaaaga gggtgcatta gtagaaggtg
     4561 tggatttaag cttcttaaac tttatcactt tcatcggggt tattgcggca cttgttcaaa
     4621 ttctggaaat gattttagac aagtttttcc cggcacttta tagtgcatta ggtatcttct
     4681 taccacttat caccgtaaac tgtgcgattt ttggtggtgt atcgtttatg gtacaacgtg
     4741 agtataactt tgtagaatct gtggtttatg gcgtaggtgc aggtacaggc tggatgttag
     4801 ccatcgttgc ccttgcaggt ttaaccgaga aaatgaaata ttccgacgtg ccggcaggct
     4861 tacgtggttt aggtattacc tttattacgg taggcttaat ggcgttaggc tttatgtcat
     4921 tctcaggcat tcaattataa ggagcatatc gtggatagta attttatttt cggtattatc
     4981 gcatttacgg ctctggtatt agtgcttgcg gtgatcattc ttttcgctaa atcaaaatta
     5041 gttgattcag gtgatattac catctcaatc aacaacgatc cggaaaaagg cattacgcta
     5101 ccggctggtg gaaaattact cggtgcttta gcaagtaaag ggattttcgt ttcgtcagct
     5161 tgtgggggcg gtggctcttg cggtcaatgt aaagtacaag tgaaatcagg cggtggtgaa
     5221 attcttccaa ctgagttatc gcacatttct aagaaagaag cgaaagaagg ctggcgttta
     5281 gcttgtcagg taaacgtgaa atcttcaatg gacgttgaac ttccggaaga gatctttggt
     5341 gtgaaaaaat gggaatgtac cgttatctca aacgataaca aagcaacctt catcaaagag
     5401 cttaaacttc aaattcctga aggcgaagaa gtaccgttcc gtgcgggtgg ttatatccaa
     5461 attgaagctg aacctcatac cgttcattat aaagacttcg atattccaaa agagtaccac
     5521 gaagactggg ataaatttga cttatggcgt tatacttcaa aagtggacga gcatattatt
     5581 cgtgcatact caatggcttc atatccggaa gagaaaggca ttattatgct taacgtgcgt
     5641 attgctacac ctccaccacg caatccggac gtaccgccgg gtcaaatgtc ttcctacatt
     5701 tggtcattaa aaccgggtga taaagtaaca atttcaggtc cattcggtga gttcttcgct
     5761 aaagataccg atgcggaaat ggtctttatc ggtggtggtg caggtatggc accaatgcgt
     5821 tcacatatct tcgaccaatt aaaacgttta aaatctaaac gtaaaatgtc attctggtat
     5881 ggtgctcgtt ctgagcgtga aatgttctat gtggaagatt ttgatggtct tcaagcagaa
     5941 aacgataact tcaaatggta tgtggcactt tctgatccat taccgggcga cagagaagat
     6001 tacttccgtg gctttattca taacgtgctt tatgagaact acctcaaaaa ccacgaagca
     6061 cctgaagact gcgaatacta tatgtgtggt ccaccggtga tgaatgctgc ggtaatcggt
     6121 atgctgaaga gtttaggtgt agaagacgaa aacatcttat tagatgactt tggtggttga
     6181 taaaccttaa cttctgacta caagcggtca aatttgcaaa attgaccgct tgatttaatt
     6241 tatattatta agttttggta atttaataat gtgaatttta aggggaagca aatggaacaa
     6301 ctggatatta cggtacttga aaatgccttc aattcccttg agaaaacgat tgtcagcctt
     6361 gagaatcaag cgtggtttaa ccggcaagaa gcaattattc aagacacttt gattgcagga
     6421 gcaatccaaa aatttgaatt tgtttacgaa ttgtcgataa aaatgctcaa gcgtcagctc
     6481 aaaaacattg agtcaaatga cactgatatt gatagcaccg agttccgtga tattttgcga
     6541 atggctgctc aatatgggct gattgaatca ccggaagttt ggctggatta tcgcaaaatg
     6601 cgaaatatta cttcgcatac ttatgatcaa aataaagcac agcaggttta taacggaatt
     6661 tcaaactttc tggaaagtac gtatttttta gttaaacagc tccaaaaacg caatagctat
     6721 gattgattta actgagtcac aacgccaaca ggtgttggat attttcaaaa aatacttgcc
     6781 tgatacaccc gtttgggttt ttggctctcg cattaaaggc acagccaaag cctattcgga
     6841 tcttgattta gcattaatca ccaaacaacc gctcacaatt cggcaacaaa cagagttaga
     6901 gcttgcgttt acggattctg acctaccttt cacagtagat ctgattgact gggcaagttg
     6961 caacgaatcg tttaaacaaa ttattttaca gcgatatgaa gtgcttattt aatcgctaaa
     7021 tatgctataa tttccccaat ttttaacttt tgtgacacca atgaaaaaat tttttcttct
     7081 tttaattgct ttttttactt taagtgcttg tgaaaaagcc cctgagcaaa ttacgctgtc
     7141 aggcaaaacc atgggaacga cttacaccgt aaaatatatt gataatggtg aagtggagaa
     7201 tttgatttcg cctgaaaaaa tgaaaaatga gctggatggc ttattgattg aggtgaataa
     7261 tcagatgtcc acctaccaac aagattcgga aattagccgt tttaatcaag caaagcaggc
     7321 aaatcaagcg gtcgaaattt cgcaggattt tgcaaaagtg gtacaagagg caatccgttt
     7381 aaataaagta accgaagggg ctttagatgt aaccgttggt ccattggtga acttgtgggg
     7441 cttcgggccg gataaacgct taaataaagt gccgtctgat gaacaaattg cagagcgttc
     7501 tgcttatgtc ggcattgata aaattttgct tgaaatgagt agtaaaccca agctcaccaa
     7561 gtcagcagct aatctttatc tagatttatc gtctattgca aagggtttcg gtgtagataa
     7621 attagccgag catcttgaaa ctataggtgt gagcaactat ttagttgaaa ttggtggcga
     7681 attacgaggc aaaggaaaaa atttacaagg cttagattgg cggattgcaa tcgagaagcc
     7741 ggtaatgaca caaggtcaag ccgcacaaat taccgtgccg ttgcacaatt tggcgatggc
     7801 aacttcgggc aattatcgta attattttga agatgaaaaa ggcaaccgtc tttcacatat
     7861 tatcgaccca aaacagttac gtccggtaaa ccataattta gcctctatca ccgtatttgc
     7921 cccaactaca atgacggcag acggcttatc aaccggttta tttgttttag gagcggaaaa
     7981 agcattagca gtggcagagc gtgaaaaatt agctattttt ttaattgtta aaaacggcga
     8041 taaatttgag acacaaatgt cgagcgaatt tagcaaactt attcaatcac aatagttgga
     8101 gtgaaaaatg gaaactgtat tattaacctt tggctttttt gtagccgtaa tttttgcgat
     8161 gtcgattggt tttatcgtga aaggcaaaac catcaaaggc agctgtggcg gtatcaccgc
     8221 tttaggtatg aaaaaaatgt gcgactgcga agaaccttgc gataacctaa aatctaaaat
     8281 cgcagacggc acagccgacc ctgaagaagt ggcacgtttt aataaagagc cacaatttta
     8341 tgaagtgaaa taatatgaat agagatattc gctggaaaca gcggtttgat aactataaaa
     8401 aatcagtaag ttaccttcaa gcagaagcag aaaaatacgc tgataccgac attgatgtaa
     8461 ttaaaaaagg aattatccag agttttgaga ttacacacga gttagcgtgg aagttaatgc
     8521 aagatatttt aaaatgggaa ggtgaagttg atatttatgg ttcaaaaacg gcttctcgtt
     8581 tggcttttaa tcgtgggcta atcactcagg gcgaagtttg gctagaaatg ataaaaagcc
     8641 gcaatataac agttcatact gacgatgaaa ctattttaac tgaagaattt aataaaatta
     8701 tcaaggcgta tctgccttta tttattgaat ttgaacagcg agtagaaaca ctatgccaaa
     8761 ctttggacta agcgaacgag cgacgaaaac tattaccgat attcttgcga aataccctga
     8821 agtggagcaa gccattattt acggctcgcg tgctaaaggt aattatcgtg aaggctcaga
     8881 tgtagatctt acttttaaag gaaaagatct tacttacgat attgtcaaac gcatttgggg
     8941 tgatttagac gattccgact cgccctattt atttgacttg tcgatttatc atcaattaac
     9001 caatgccaac tttattgaac atattgatag agtaggaaaa gtcttttacc aaagagaact
     9061 ctaatttctt aataggcaag cggttcattt tgcaaaattt tttgcaaatt tcaccgcttg
     9121 ttgtttttat tattaaccaa tgtgcttcgc cttaaccgaa gttacgggag atttatgaca
     9181 actcaattaa cctcaaaaac ctacgacact catttcccta aattaacccc agaacaactt
     9241 gctgaaaaca gcaagaaaaa agtcattatc ggtatgtccg gtggggtgga ttcctcggtt
     9301 tccgctttta ttcttcaaca gcagggctac caagtggaag gcttgtttat gaaaaactgg
     9361 gaagaagatg atgatacgga ttattgtacc gccgccgccg agcttgccga tgctcaagcg
     9421 gttgccgata aactgggtat gaaactgcat aaaattaatt ttgcagcgga atattgggat
     9481 aatgtatttg aatatttctt ggcagaatac aaggcaggaa gaacgccaaa tccggatatt
     9541 ttgtgtaata aagagatcaa atttaaagcc tttttggaat atgcggcaga agatcttggt
     9601 gcggattata ttgcgaccgg gcattacgtc cgccgtacga gcgatgatca agatgcgaaa
     9661 cttttgcgtg gcttagatga aaacaaagat cagagttact ttttatatgc gttaaataaa
     9721 aagcagatcg ggcagagttt attcccagtg ggtgaaattg agaagccgat tgtgcgagcc
     9781 attgccgaag acctaggatt agcaaccgca aagaaaaaag attctaccgg catttgtttt
     9841 atcggtgagc gtaaatttaa agatttctta gctcgttttc taccggctca accgggggaa
     9901 atccgcaccg ttgagggcaa attagtcggt cgccatgatg ggctgatgta tcacacgctt
     9961 gggcaacgca aaggcttggg tatcggtggg gtgaaagggc taagtgaaga tccgttttat
    10021 gtggtggaga aagacttaat taacaatgta ttgattgtgg cacaaggaca cgataattca
    10081 gccctgcttt caagtggctt aattgcgaaa cagctcactt gggtggatat gcagccgttg
    10141 cgtgaaaatt tacgctgcac ggtaaaaacc cgttatcgtc aagcagatat tgcgtgtgaa
    10201 atccaagtga ttgatgatga aaccattcga gtgatgtttg atgaaccgca aattgccgtg
    10261 acgccggggc agtctgccgt gttttactta ggtgaagttt gcttaggcgg tggcattatt
    10321 gagtcacaat taaaatagtt ataaataaat attgaaatat tttgcatatt tatgcaaaat
    10381 aagcgaaaag ttaaggcggt aaaacgcctt tttcattttg atcgatacaa agaataatat
    10441 acaaggaaca gactgtggca ctttggggtg gacgctttac acaacaagca gacgcaaaat
    10501 ttaaatattt taacgattca ttacgttttg attaccgctt ggcgattcaa gatattgaag
    10561 gctcaatcgg ctgggcaaaa gccattactt cggtaggtat tttaacggta gcagaattag
    10621 aacaactaat cgcagcatta aaagaggtga gagcagaggt agaatctaac cttaccatca
    10681 tcttaaaaga tgatgcggaa gacattcaca gctgggttga atctaagctg attgaaaaag
    10741 tgggcgattt aggtaaaaaa ttgcacaccg ggcgtagccg taatgaccaa gtagcggtgg
    10801 atattaaaat gtggtgcaag gtgcaagcgg tggcattgca agaaagaatc cgagctttgc
    10861 aagagcgttt ggtttccgtt gccgaagaaa atcaagagtc ggtgatgccg ggctataccc
    10921 atttacaacg agctcagcct gtgaccttcg ctcattggtg tatggcgtat tatgaaatgc
    10981 tagaacggga tttcagccgt ttgagtgatg ctaataaacg tatgagcact tgcccgcttg
    11041 gttcaggggc attggctggt acggcttacg gcattgatcg tgacttatta gcccgtgatt
    11101 taggctttga agaagccaca cgcaacagtt tagacagcgt gtcagatcgt gaccatattt
    11161 tagagctgct ctctactgcc tcgatcagta tgatgcacct ctctcgcttt gctgaagatt
    11221 taatcatttt taatagtggc gaatcaggct tccttgaaat gtcggatcgt gtgacctcag
    11281 gctcatcact tatgccacag aagaaaaacc ctgatgcttg tgagctgatt cgtgggaaat
    11341 ccggtcgggt atttggggca ttaaacggtt tattaactac actcaaaggg ttaccacttg
    11401 cttataataa agatatgcaa gaggacaaag agggtatttt tgatgcgttg gaaacttggc
    11461 aggcttgttt agaaattgca gaacttgtac tggttgatat tcaagtgaat accgaacgca
    11521 cccgagaagc cgctcagcaa ggttatgcga atgcgaccga gttggcagat tatttagtgg
    11581 cgaaaggcgt gccattccgt gaagctcatc atattgttgg cgaagcggtg gtttacgcaa
    11641 tcagcaaaaa agagccactt gaagcattaa gcattaacga attccagcaa ttccatcatt
    11701 cgattggcga tgatgtttac ccaattctct cgttagaatc ttgcttagaa aaacgttgtg
    11761 ccaaaggtgg agtgaaccca caacgtgtgg cagaggcgat tgcggtagcc aaagccaatt
    11821 tagcttcaaa gtaaaaccgg atacaagcgg tcatattttg caaaaaaatt gaaaaatatg
    11881 accgcttgcc gattaaattt tcaatttttt acgcattaag attgcaaaat aggcattacc
    11941 tctttaaact tccgaataat ttttgaattt tatttctact actttcttta aagagtttta
    12001 tatgacggaa tcagttaatt ctactcaagc tggtacagca ctttctttag ggcaacaatt
    12061 aaaagcggct cgtgaagcgt taaatctctc tattacagat gttgctcaaa aaaccaactt
    12121 aaaaaaatca catattgaat cacttgaaaa tgatatcttt attctacaaa atgttgcccc
    12181 aacttttgtg cgtggctatg tgcgtaatta tgtgaaattt ttgcgtttac ctgaatccct
    12241 tatttcgagc gttaattatg gtgaagtcac tattccaaaa gaagtcacta aagtttcttc
    12301 agtaaaacct tcatcaaatt cacaaggtaa aaccttaaag tatttaacgg tattagtatt
    12361 gcttgcggca ttaggaatga cattactttg gtggtggcaa gggtatcaaa aagaacagga
    12421 aaatcgcgag caatttgtta gctctgcacc agttgctgaa gtggcgaata ccgctacaaa
    12481 taatgatgct tcagcacaaa cttccgtgcc tgttcagcaa cctattcagg tttcagagca
    12541 gcctgctcaa gtagcagaaa cggtagttgc agcagaaccg gcattaactg aaaaagtaga
    12601 gcctacacaa gcagcatcat cacctgtaac acaagaagat gttaaagtgg tagaagaagt
    12661 taaacaagct gatgccacca ctgcacaggt tgaggcagtt aatgttttac agcaatctca
    12721 atcggaacaa gcccctacag aacagcctgt tgcggtaacg aatgatgagc ttcgtatcga
    12781 aattaccggt tcacaaagct ggattacagt gcggggtgct aaaaataaac gtttagcaga
    12841 aaaattatat aacaatggtg agactttaag tttcaatgag aatgagcaat atcgtttaac
    12901 cattggtgcg cctgccaatg taaaagtgta ctataaaggt caagaagtac cattgaaaat
    12961 tgatgggcgt gtagctcgta ttcatttacc gttacagtaa gcttgattta acgatgaaac
    13021 gcacgtaaag ctagcattta acgatagctg tctttacgag cgttttctgt ttttataaat
    13081 tttcacaatt agctaaaaat atgatacatc aatcacctat taaacgtcgg gtatcgaaga
    13141 aaatctatgt gggtaatgtg cctgtaggcg gcgatgcacc gattacggtt cagtcaatga
    13201 ccaacacccg cacaaccgat gtggaagcca ccgttgctca aattaaatcg ctggaacggg
    13261 tcggggctga tattgtgcgt gtgtctgtgc cgacaatgga cgctgctgag gcatttaaag
    13321 cgattaaaca acaagtgagt gtgccattgg tggcggatat ccacttcgat taccgcattg
    13381 cgttgaaagt tgccgaatat ggggtggatt gcttgcggat taacccgggt aatatcggga
    13441 atgaagagcg gatccgcacg gtggtagatt gtgccagaga taaaaacatt ccgatccgaa
    13501 tcggggtaaa tgccggatca ttagagcgtg atttgcagga aaaatatggc gagccgacac
    13561 cacaggcatt attagaatcg gcattacgcc acgttgatca cttagatcgc cttaactttg
    13621 atcaattcaa agtcagcgtg aaagcctcag atgtatttct agcggttgaa tcttaccgac
    13681 ttcttgcaaa acagattgat cagcccctgc atttaggtat tactgaagca ggcggagcga
    13741 gagccggttc ggtgaaatcg gcggtaggct taggtctgtt gctagcggaa gggattggtg
    13801 ataccttgcg tgtgtcatta gcggctgatc ctgttgaaga ggtgaaagtc ggttttgata
    13861 ttttgaaatc gctgcgtatt cgctctcgtg ggatcaactt tattgcttgc ccaacctgct
    13921 cccgccaaga aattgatgtg attgcgacgg taaacgagct agaacaacgt ttagaagaca
    13981 ttatcacgcc gatggacgtt tcgattatcg gctgtgtggt aaacggtcca ggagaggcgt
    14041 tggtgtctga tttaggggta accggcagca ataaaatgag cggcttttat ttagatggcg
    14101 ttcgtcaaaa agagcgtttt gacaacgcaa aattaatcga ccaattagaa gctaaaattc
    14161 gtgccagagt tgcacaacaa cataatcgta tagatattga acaaatagga taaatatagt
    14221 ggcaaaaaca attcaagcaa ttcgaggaat gaacgactgc tcaccaagtg agtctccatt
    14281 atggcaatgg gttgaacaga aagtgcgtaa tgtgctggca agttacggct attcggaagt
    14341 acgtatgccg attgtagaaa gcactccgtt atttgcccgt gccattggcg aagtaaccga
    14401 tgtggtgtcg aaagagatgt acacgttctg ggataacgat gagcaattaa cgctccgccc
    14461 ggaaggtaca gccggttgtg tgcgtgcagc gattgagcgt ggttggatct acaataatga
    14521 gcaacgctta tggtatatgg ggccgatgtt ccgccacgaa cgtccacaga aagggcgtta
    14581 ccgccaattc caccaagccg gtgttgaagt gtttggcatt gcaaatccgg aaattgatgc
    14641 ggagttgatt attctcaccg cacgcctatg gaaagagtta ggcatcgatc aacatgtttc
    14701 tttgcaactt aactctatcg gctcgttaga agctcgtgca aattatcgct cagcattagt
    14761 aaaattttta gaaaatcaca ccgctttaat gaacgaagaa gagaaagagc gtttggtgaa
    14821 aaacccgcta cggattttag ataccaaaaa cgaagcacta caaaatgtat taaacgatgc
    14881 cccaaaactg ctcgattatt tagatgatga cagccgtgaa cattttaccc aactttgtgc
    14941 cttacttgat gcaatgggaa tccgttacga agtcaatcca aaattggtgc gtggtttaga
    15001 ctattacaat aaaaccgtgt ttgaatgggt cacttcagcc ttaggctcac aaggcaccgt
    15061 atgtggcggt gggcgttatg acggcttagt cgaacaactc ggtggacacg caacccaagg
    15121 cgttggcttt gcaatgggct tagagcgttt agtgctgttg gtacaagagg tgaataaaga
    15181 gattgattta ccaaaaacgg tggatgtgta tatcgtattc tccggtgaag gggcaacact
    15241 aaatgccttc caacttgcag agcagattcg tagcgaattg ccacacgttg gcgtaatgac
    15301 acactgttcc ggcggtaaat tccaaaaaca atttaagcgt gcagataaag tagaagcgca
    15361 aattgcgtta gtgattggcg aaagcgaagt ggctgaaaag caagttgtta tcaaagattt
    15421 acgttcagga gcagaacaaa tcacgattgc tcaatcagag ctgattgctg agctatctaa
    15481 acgattttag gagaaaaaga tgagtaacga atatttaaat aaaaccgaag agcagcaatt
    15541 tgaagatgcc aaaaattggt ttaaagagaa cgggacaccg attttggtgg cgattatttt
    15601 agcttgtgcg gcaactgccg gctggaattt ttggaaaaat caccagcttg aaacggcaca
    15661 aaaaacatcc gcttcatacc aaagcgtgat ggagagttat ttgcaaaatc caagcaaaaa
    15721 tcaaccgctt gttgagaaat ttattgccga taataaagat tcaagctatg ccgcttttgc
    15781 ccaatttgaa gtagctaaac aagcggtcga aaaagggaat ttttctgcgg caaaaacagc
    15841 gttacagtca gttttgactt attcggattc aaccttacaa tctatcgctc gttttcgttt
    15901 ggctcaaatt gacttccaac taaaatctta cgatgaagca ctggcaagtc tggctcaaat
    15961 tcaagataaa gcgtgggaat tgcgtaagca aattctaaca ggcgatattc ttgcagcaaa
    16021 aggcgatatt cctgcggcga aaagtgctta tgagcaagct aaaacgaccg caaatcctca
    16081 ggaacaaacc ttaattgatg tacgtttgaa taacttataa aaacaaagcc tgattgaaat
    16141 aaaatcaatc aggctttttt gttggtttag tgttgctgtg aattataaac gcattggcat
    16201 aatcacatat tcggcagagc tgttgtcgca atcttcaatt aagcaactag aacttgaatc
    16261 aactaagcta aaacgcacac gttggcattt taaggtgttt aacacatcta atacatagct
    16321 aacgttaaag ccgacttcca tttccgggct gtcgtaggca acatcaatga tctcttccgc
    16381 ctcttcttgc tccggattgt ttgcggtaat tttgagtaaa ttattgctta aggttaaacg
    16441 cacccctcta aatttctcat tagaaagaat cgctgcacgc attaatgccc gtttaagggt
    16501 ttcggtttcc gcttctagaa tgcgatctgc attgcgaggc agaactcggc ggtaatccgg
    16561 gaatctgcca tcaatcagtt tagaggtaaa tacaatgccg ttcattgtaa tacggatatt
    16621 gcttgaaccg atttccaaac gcacggtttc atcgttgctg gcaaccaagc gggaaagctc
    16681 aagtacggct ttgcgtggca cgataaccga atgagtcaaa agctcttgat ttagcaccat
    16741 tgtgcaaacc gctaaacggt gcccatctgt ggcaacggtg cgtaataaat tgccttcggt
    16801 ttcaaatttc attccgttta agaaataacg ggcgtcttgg tttgccattg agaattgggt
    16861 ggcatcaatc agacgggcaa gggtagattg atcaatcgag aaatccactt ccggtttcca
    16921 atccatcaaa ttcgggtaat cacttgccgg taatgtagct aaactaaatt tactacgtcc
    16981 tgctttgata atggctttat cttcttcaaa ttgtaccgaa atcacgctgt catcaggtag
    17041 gcttttactg atatctagga attttttagc tggaatggta aattttccgg caaaatcgac
    17101 cgcttgtagc agttgtgctt gggtggttaa ttccacttct aaatcggtac cggttaaaga
    17161 tagacgatta ccttcaattt ctaataaaag attgttaata acaggcaaag tcggacggct
    17221 acttaatacg ccacacacct gttgtaaagg cttaagtaat tgttctctgg taatggtaat
    17281 ttgcataatc attccttcat cgggctaaga tgataatttg cgtgttaaat ggatataatc
    17341 ttcttggata ccgctttcgg tatcgcgtaa ttcattaatg gttttgcagg cgtgcatcac
    17401 ggtagtatga tcccgaccgc caaattcccg accaatttcc ggcaagctgt ggttggttag
    17461 ctcttttgcc agtgccattg ccatttggcg aggacgggca atgcttcttg cccgactttt
    17521 cgatttaata tcggcaactt ttatgccgta atattcggcc acaatgcgtt gaatattttc
    17581 aatcgtaatc aagtaatcaa aagaggcaaa cagatcttgc aaggtttcac gcaccgcatc
    17641 aaccgtaatc gggcgaaggg tcaatttttg ccacgcaatc acacggttta atgctccctc
    17701 caattcacgc acattggttc ggagtttttg ccccattaaa taggcggcat cttcttgcaa
    17761 atctgctcca cgttctaagg ctttttggcg aagaattgcc actcgggttt ccaattcagg
    17821 tggctcaatg gtcgcactaa taccgccgct taaacgggat ttaatcgctg tgtcaatttt
    17881 atcgatattt tttggcaaaa cgtcagaggt tagaataatc tgctttctct gctcaaataa
    17941 agcattgagt agatgtaaaa actcttcttg tactttcggt ttattggcaa gaaattgaat
    18001 atcgtcaatc attaacacat caagcgagcg gtagaatttt ttgatttttt ccgcatcgtt
    18061 attggaactg ttgatcgcct taataatatc acgataaaaa cgttccaaat gaatatatag
    18121 cacccgagta cccggtgtgc gtttaactaa ttcattgccg atagcgtgta ataagtgggt
    18181 tttgcccaaa ccggtgccgg cataaaacga gagtgggttg caatggcttt cgcctaaatt
    18241 atccaccact tgttgagcca ctaatttagc taattggttt gagcgacctt gtacaaaatt
    18301 atcaaaggtt tgatttggat ttagcccggt tttaaagccg gtattgctga attctgaact
    18361 ctcgtttttt agatttgggc tgacctttgg ctgttctgtc ggtttaatcc caacttttaa
    18421 cgtaaccacc aaattatcat ttttcgccaa aaaacgggca agctcggtaa tttccgataa
    18481 aaatttatct tttacccagt tttcaacaaa ttgattttgt gcataaagtg taagttcccc
    18541 attctcagaa ctcgcttgca gaggacgcag ccaagtgctg taatcagttg gtgagacttt
    18601 cgtttgtaag tgattaaggc aatcagacca aagggaagac acaatttgct ccaaaattat
    18661 tgttattaaa ggtcataatg atacctgaaa aaaggggaga aatcttgcaa atttttgaga
    18721 gattttatgg gggcttggaa gcgattttaa ttggcgaaca agcggtcgtt ttttgttgaa
    18781 atcttgcaaa ttgctaacaa aaaatgaccg cttgcttagt atgatgtgtg atggagttga
    18841 ttaaatatcc gtattctccg gcaagaaccc accgctttgg tgagcccaaa gtctggcgta
    18901 aacaccgttt tgagcaagca attcttcgtg cgtgccttgt tcaacgattt cgcctttatc
    18961 taacacgata agtctgtcca ttgccataat ggtagagagg cggtgggcaa tcgcaaccac
    19021 ggttttacct tccattaatt gcgtgagatt ttcttgaatt gccacttcta cttcagagtc
    19081 taacgcactg gttgcctcat cgagtaataa aatcggagcg tcttttagca tcactcgggc
    19141 aatcgcaatc cgttggcgtt gtccgccgga aagttttacc cctcgttcgc caacgtgtgc
    19201 atcaaaaccg gttctgcctt tggcatcttg caggtttgga ataaattcac tggcggcagc
    19261 ttgttcaacg gctttgatca tctcttcttc agtggcgttt gggcgaccgt acatcaagtt
    19321 ttcacgcaca gagcggtgta acagcgaggt gtcttgagtt actaaaccaa tttgtgagcg
    19381 aaggctttct tgggtaatat cacggatatt ttgcccgtca atcgtgattg aaccgtcttg
    19441 aatatcgtaa aaacgcaata ataaattggt gagcgttgat ttacctgcac cactacgccc
    19501 gactaagccg actttttccc ccggttttat agtgaggtca aaatctttca gtagcggttt
    19561 tttcggatcg taggcaaaat ccacattctc aaatttaatt tcgcctttgg ttacatttaa
    19621 cggtttcgca tcgattttat ctaccacatt gtgtggtttg gaaagcgtaa tcataccgtc
    19681 ttgtaccgta cctaaatttt caaatagacg agcaaattcc cacataatcc attgtgataa
    19741 gcctttaatg cgtaaagcca aagcggttga ggtggcaatc gcccctgcag ttactacgct
    19801 tgaaccccaa agccataaac cgatacccgc agttgaaatt attaatgcca tcgaggttag
    19861 attagttacg gtttcaatta cagtcactaa acgcatctgt ttatgcactg tcaccataaa
    19921 tccttccatc gactctttcg cataggcaga ttcacggttg ccgtgcgaga agagtttgac
    19981 ggtggcaatg ttagcgtaag catcggtaat tcgaccggtc attaaacttc tggcatccga
    20041 ttgctcttga gcagcttggg ctaatttcgg gacaaagtag ataatggttg ccgctaatga
    20101 gatgacccat aaaataaacg gcacgaataa ccagccgtca agttgtaata aaatcacgct
    20161 ggaggtggtg aagtaaacca gcacatacac caacatatcg gcacaagtca taatcacatc
    20221 acgcacggaa agggcggttt gcattacttt tgcagacact cttcctgcaa attcgtcttg
    20281 atagaaacct aaactttgcc caagcattaa gcggtggaag ttccaacgca aacgcattgg
    20341 aaatacccct tgcagagatt gaaagcgaat gctgctggca aggtaaacaa acaccactgc
    20401 aagtagggca ataaaaaaca taccgataat cgtccagcct ttttctgccc aaagttctgt
    20461 tggcgagtat ttattgaccc aatcgactaa atcgcccata aagcgaaaca gaaccgcttc
    20521 gataataccg acagctgcaa ctaatacggt cagtagtaag atataaaacc gcattccttt
    20581 agtggcatcg taaataaaag gaatgagacc tgattttgga gttttcggca tttcatttgg
    20641 ataggtttcc acccttgcct caaaccattt aaacagtttt tcaaacataa atttgtgatt
    20701 tccgaataaa aatgcagggg caaatagcca tttgcccccg aaaaaatgtg aaaaaattat
    20761 ggattaagta atttttcgtc taaggctaaa tcttcgttgc gatttatacc aatgccggca
    20821 gctaatacgt tgcgggcaat ttgatgtgct tcttttaaag aatgctcttt gtaagagcca
    20881 cattgatatt cattcagctc agggattgcc gatacatcag gaattttatg taacgcatct
    20941 tccattgatg ccgtccaagc tttgacaact tcttctgctg aaggcgatcc aatcagtgac
    21001 atataaaaac cggtacgaca acccattggt gaaatatcaa tgatctccac ttgttcgcta
    21061 ttgaggtgat cacgcataaa accggcaaaa agatgttcca tcgtgtgaat cccacgcacc
    21121 ggtagaatat caatattcgg acgacagaaa cggagatcga acacggtaat ggtatcgcct
    21181 ttcggtgtgg tcattgtttt tgcaacacgc acggctggtg cgttcatttt ggtgtgatct
    21241 actttaaaac tatctaataa aggcattttt tactccatca atattattcc gcaattcctt
    21301 gatcccaagc cggggcttca tcaggtagtt tgcgctgtaa gaaaaatcgt ctgtttggct
    21361 gggcttgagg cttcaccact ttagtgtaag gggtagagaa ctcaataccg ccatttaata
    21421 actgcgacat tgtgccggag ttcatactta caccttgcag gctcacgtcc atagtgtaac
    21481 ctgaagcttg ccagaattgg gtattggttc tgactaagtg cttgtattta tcttgaatat
    21541 tgacataaat aagcactcga tcgcctaact cacttagccc taaacggctg actattccca
    21601 cctgcattcc acggtaaagc accggtgctt ccggctgaat accgttagca ttggtggttt
    21661 cgacaataat ggggaaaccg ttggcatagg tggtttttac cgtatcggta tctgcaagaa
    21721 caaattggtt ttgagcttgc cctgaaccga catcaaccgt aatgtaattt tgtagtgctg
    21781 catctaaatt tttaaagccg gaggtactga tttcaggcga gataacatta aatttactgc
    21841 cggcttttgc aattaacgga tagtatttcc tttgaatgta agcggtcgct tttatctgtt
    21901 tttttgcatt ttgtagctca agtttttcaa tttgacctac ggttaagccc atatatttaa
    21961 tgtccattcc ttcgcttaac ttactcgcat cttttgcaat cagcgtgaga taagtattgc
    22021 ccgaagtggc tttctcctta cttgcataaa gcgttttatt gccttttgaa ccgccatcat
    22081 caaagctgat cgcccctttt aaggtacgca ttaatggagc tgtagtgata ttcacgcctt
    22141 tgagtgacac atcaacactc gttgccggct caatccagaa acggcttttc tcggttaata
    22201 gatgacgata atttggctgg ataaatagct caacctcaaa tttttgttgt ttcggggtta
    22261 tttttaacac ctcgccgacc tgaaaatcac gatatagcac caaagagcct tcgctgatac
    22321 cagataatga atctgccgaa agggtagtgg tggctttttt atctaaggta gccatgcctg
    22381 attccgcact ttctatatct ttataaagtg catattgttt tttcgggcta ccgtcatttt
    22441 taccgttaat taagcgaaca ccgcctttta accattcaga tggtgaaccg gcgtgaactc
    22501 ttaacccatc tagccccacc gacatatcaa tgttggatat cgcaacaaat ttgctgttac
    22561 tcccaatcag gttgcgataa ggcggataaa taatgacatc aaaacgtact ttgtctaact
    22621 ctaggctacg tttgacgatt tctccgattt gcacatcgct atagtaaatc ccctgattgg
    22681 tatctacccc ataggcttga ggagcaatta agctaaagct aagtaaattc ggtaaactta
    22741 atagataatc ggcttcgttt tgtaccacaa attccgattg aggttctcct tcccccgggt
    22801 gaacctcaaa atagacacca cgcagcagct cacctacttt cgtcagctgc tctgtgttta
    22861 aggagaattt cggctctttg agcaagattt tagtttggga acgtagtaaa ttttcataac
    22921 ttgggtcaat taataaaacc ccatcaatct gtttatgctg ccctgattct tgctgtggca
    22981 caccgttgtc ttttacttgc ggtaatttta gctgcgaaag cataccaatt tgcacatttt
    23041 ggtgaaaaac accagtctca ttaattttta aattatgtgt aagcggtagt tttacgttga
    23101 tttcaattcc acgtttagct gatttcaaat ccggatatag ctcaaatttc tgtccttgct
    23161 cggcaatttc catattatca ggcgaatcaa aagcaaccgc accttgtact accgaggcaa
    23221 ggctgtccat attgatttta ataccttgta aatttacatc agcgctaata ccgctaatat
    23281 tccaaaatcg gctctctttt tttactaaat gagcgtattt ttgattaatg acgacatcaa
    23341 tttcgatttt tttctggtct ttggtaaaac gataatcggc aatattaccc actggcactt
    23401 tacggaaata aacactcgct ccgacagtaa tagagcctat gtcatcagag attaaacgga
    23461 tcagtaaatc gccatcgctc acggtaatag ccggaggatc ttcttctgca ataaattcat
    23521 caacgaaatc gccttcaccg ggaagtaggg taatatagtt accagaaaca atcgcatcta
    23581 agcctgaaac gccagccaaa gaagcacttg gttgcactaa ccaaaattta gtctgtttgc
    23641 gtaaaatact tttggcttca gggtttattt ctgcttgcac ttccacttct tttaaattat
    23701 cgacaaaata aacacgctta acctgaccaa tctgcaagcc ttggtaacga atagcggttt
    23761 ttccggcagt aatgccatca cctttactaa atcgaatcgt gattgtttca ccttgctctt
    23821 ttaaaatttg gaaaaatagc aaagcaccaa taataaaagc aactattggt aacagccaaa
    23881 aaggagaaat tttgcgaggc tgccggattt gggcatctac aacagtgtgg gtattttctt
    23941 ccatcgtcat tttaaattag ggaaacctat atagaacaat accgaagacc caaagggact
    24001 tcggtaatag aaataagtca aaataagaaa tattattttt tctcatcaca gttggttaaa
    24061 ttactgcatt taccatacag atataaactg tggttagtca attccattcc gtgtttttca
    24121 ctgatttcac gttggcgacg ctccatatca ggatctttaa attcgaacac cttaccacaa
    24181 tccatacaaa taatatggtc gtgttcgtgg ttcatattta attcgaatac tgctttattc
    24241 gcatcgaaat tatggcgggt taaaatgccg gcttcttcaa attggtttaa gacacgataa
    24301 accgttgcta aaccaatgtc tgagcctttt tctaacagaa tcttataaat atcttctgct
    24361 gcaaaatgtt gcatttcatc acgaatatct tgcattaatg caaggatagt caaacgaggc
    24421 tcggttactt ttaagcctac ctcttttaaa cgtttaatat ttgcttcaga catatatgcc
    24481 acttatttat ctttatccaa aatagttatt atgcgagttg gtctaagcac atttcttctt
    24541 tcaactgctc gcaccattta ttaacacgtt cagtggttaa ttcaggctga cgatcttcat
    24601 caatacataa gccgacaaaa gtatcatcat caactaaggc ctgagaaacc tcgaaagtgt
    24661 aaccggcagt tggccaatga ccaacaatca caccaccatt tggctctacc acatcacgca
    24721 cagtacccat tgcatcacag aaatattctg cataatcttc ctgatcaccg caaccaaaaa
    24781 ttgcaacgac tttgccgtta aaatcaatct cttttagggt aggcataaaa tcgtcccaat
    24841 cggcttgcga ttcaccataa taccaagttg ggatcccaaa catcagaaaa tcgtatgctt
    24901 caatatcttc ttttgtgctt ttggcaatgt ctcgaatatc aattaattca gcccctaatt
    24961 ttttctgaat catttttgaa atattttctg tattgcctgt atcgctaccg taaaataaac
    25021 ctacaactgc cattgctact acctatttgt gagataatta tttagaattg tttcaattaa
    25081 ctgcccgcgt gaaacacctt gttcagacgc ctgttcctct aataacttta ctaaattcga
    25141 atgcagtttt aattctaccc gttttaaacc ggaagattta tctcgtttta gttggttacg
    25201 tttattgatt cgaagttgtt gttctctatc aagaggattt gtacgaggac gcccaacttt
    25261 tggtacagtc gcaaacagat ctaaggttat acaatctgaa tcttgttttg ccattttgtt
    25321 ttactattgg gctttagcta atcctcagtt ttaatgagaa tgataagcta cttttaaagt
    25381 gtgaactata tcaaaagttc aatcatttga aaagtaaatt acaggcaaaa caagcggtgt
    25441 ttttaggttt aaaatttgca aaaaccataa attacacatt atgagttatg atttttctga
    25501 agcgtgaaat tagcttataa tgaaaccgaa taacgttatg aaaaaggaga tagtgtgtcg
    25561 aatatccatt tagcgattgc cgctgatttt acgctggcag aaaaattact tgaagcatta
    25621 gcaaatcaag atttagggat tgaaaatatt tcagccgttg agcttgagcc gtttggtgaa
    25681 gagcagaatt tacgctttgg ggcaaaagca gtcgcacaat atgcgttaga tgaagtaaat
    25741 tgggcggaat ttagccatgt tctatttgcc ggcaaaatgg cacaagcgga agtgttggca
    25801 gaagcggtga aagccggctg tgtgatttta gatttatacg gcattaccgc actcatcggc
    25861 gatgtaccgg tagttgtgcc aagtgtaaat gatgaaaatg tcgcaaattt gcgtgagcga
    25921 aatatcgttg ctttagccaa tccgcaaatt tcacaactgg cgttagcctt aaagccattg
    25981 ttgaacgagc cgttaaaaca ggtgtgggta acctcacttt taccgtctgc ctattttggc
    26041 gatgaaaaag tcaaggagct tgccggacaa actgcccgtt tgttaaacgg cattccgttt
    26101 gatgaaaatg cggaacgcat tgcctttgat gttgtgccgg ctaatgtgca aggagaagag
    26161 aaaagtctgc cgttctcaaa agcctttgaa ctgcaaattg caaaagtttt accaaatttg
    26221 accgcttgta ctaccttcca cagcgtgcaa gtgccggtct tttatggggt ttcccaaatg
    26281 gtgtcggtgc agtctgaata tcagttagat gctaatgcgt taagtgaagc ttggaaagcc
    26341 gaaaattggc tgaattttaa tgaaaattca gtgattacag cggtgaaaaa tggcgaaaac
    26401 gaagagcaaa atgcgttaga aatcagtcag ttattggcga aatccgaaca ggaagtgcag
    26461 ttctggacgg tcgccgatga acagcgtttc agtctggcat ttttagcggt gaaattacta
    26521 aaattagttt tagcgtatta agtgcttgca aaagtattta ttccgtgata aaaatcgtca
    26581 acgcccgagc aaccgattgc ttgggcgttg tcattttgtt taaacaccga aggtcttatg
    26641 ttagaaaaat tatttcagct caaagcaaaa ggcagtaatg taaaaaccga aattatcgcc
    26701 ggtattacta cctttttcac aatggtttat attgttttcg tcaatccgtc tattttaggc
    26761 gtggcgggaa tggacaccca agtagtgttc gtgactactt gtttaattgc cgcttttggt
    26821 actatcgcaa tggggttatt cagtaattta ccgattgctc ttgcaccggc aatgggctta
    26881 aatgcctttt ttgcattcgt agtggtgcaa aaattaggtt actcgtggca agtgggtatg
    26941 ggggcgattt tcttaggctc tgtcggctta ttcctattaa ctgtattaca agttcgttac
    27001 tggtttatgt ctgcgattcc acttggttta cgtgtaggta ttggtgccgg tatcggttta
    27061 ttcattgccc taatcggttt taaaaatatg ggcttggtgg tgccaaatcc ggcaacgctt
    27121 gtggcactag gtgatttgca cgacccgaaa gtgttaatgg ggattttagg ctttttcatc
    27181 attgttgtat tagcggcgaa aggtattcac tcaggcgtgt taatttcaat tgtgattgtt
    27241 accgctcttg ccttagcctt tgacccggcg gtgagcttta acggcataat gtctatgcca
    27301 ccaagccttg gggcagttgt ggggcaggtt gatattgccg gtgcttttga tgttgcctta
    27361 ctcgggatga ttttctcctt tatgttggta aacctgtttg actcttccgg caccttaatt
    27421 gcggtgacta ccaaagcagg ctttgcggat gaacaagggc gtttcccgaa aatgaaacaa
    27481 gctctgctag tagatagtac cgctgcaatg gcaggctctt atatgggaac ttcagcgatt
    27541 tctacctata ttgaaagtgg ctccggcgtt tcagttggcg gtcgtaccgg cttaactgcg
    27601 gtggtagttg ggatcttatt cctattaacc attttcttct caccacttgc agggttagta
    27661 cctgcctatg caactgcggg ggcattggta tttgtaggaa ttttaatggc atctagctta
    27721 attgaagtaa aatgggacga tttaactgaa gctacgccgg catttattac taccgcaatg
    27781 atgccgttta cttactccat cactgaaggg attgcattcg gctttatcag ctactgcgta
    27841 atgaaagcct ttacagggcg ttggaaagaa atcaaccttt ctgttttagt ggtttcactt
    27901 ctctttattg ctaaatttgt gtgggtgggt taagctctac ccccctctcc ctgatttttc
    27961 ttctaaacga agaaaaatct atccctctcc cacaaagggg agagggtatt tgattcatta
    28021 tctatgtgtt tcgtgtattc cgaggtaaaa caatgtctaa ttcagttcaa aaacttcttt
    28081 ttatcatcaa ttctgctcct tacggcaatg aaacgttttt cagtgcgttg cgtttggcat
    28141 tacaaattca agaacaacat aaagccaata cggaaattaa acttttctta atgtcggatg
    28201 cagtcaccgc agggctggca aagcaaaatc cggcagaggg ttatcatatt cagcaaatgc
    28261 tggaaatttt aaccgcccaa ggggcaaacg taaaattatg caaaacctgt actaatgctc
    28321 gagggattac agatttgcct ttagccgatg gggtagagat tggcacatta attgaactgg
    28381 cagattggac aattcaagca gataaggtac tgaattttta atgcaaaata ttgatgttgt
    28441 ggtgattggt gccggtgcgg cagggctgtt ttgtgctgcc caactggggc aagctggcaa
    28501 aaaagtggtg gtgttagaca gcggtaagaa agtcggacgt aaaattttaa tgtctggcgg
    28561 tggtttttgc aattttacga atttagacgt aagtgccgga aattacctta gccaaaaccg
    28621 ccattttgtg aaatccgccc tttcacgtta tacccaatgg gattttattt cgcttgtcag
    28681 ccactatggc attagctatc acgaaaaaga gctagggcag ttgttttgtg atgaaagctc
    28741 gcaacaaatt gtcgatttac tacaagcaga atgcaacaaa ggcaaggttg agattctgtt
    28801 acggcaagcg gtcatttctg tggaaaaagt tgcaaatttt tttgaaattt cgaccgcttg
    28861 tggcaagttc caatccgaac acttagtgat tgcaaccgga gggctttcaa tgccggctct
    28921 cggggcaagc ccttttggct atcaacttgc cgagcagttt ggtattcctg ttgtgccacc
    28981 acgtgcaagc cttgtgcctt ttacttggaa agagagcgat aaatattttg ccgagctttc
    29041 cggcattgca ctgccgatta ctgtttccgc caatggcaaa agttttagca atcagatgtt
    29101 gtttacgcac agaggcttat ccggcccggc aattttgcag atttccaatt attgggaatt
    29161 gggggaaacg gtagagattg atctgctacc ttcgcagtcc attaccgata tattgagcga
    29221 actacgccaa tcttcgccga aattacagct aaaaaccgta ttatctcgtt atttacctaa
    29281 aaaattggtt gaagtttggc tggaacagaa attgctgacc gataaagtga ttgccgattt
    29341 gagtaaaaaa gatctgacct tattagagca atttatccac cattggcatt tcttgccaaa
    29401 cggcacggaa ggctatcgta cagcggaagt aaccaaaggc ggtgttgata ccgactatat
    29461 ttcatctaaa acgatggaag cgaaaaatac agcagggctt tattttatcg gcgaagtgct
    29521 ggatgttacc ggctggcttg gtggttataa tttccaatgg gcgtggtcat ctgcttttgc
    29581 ctgtgcagaa gggattattg aaaaaagcaa ataactaaaa aagcaaataa ctaaaaaacc
    29641 aaacaaaaag gcgaacacaa ttgttcgcct tattttatgc tgaattatct tgcacggaaa
    29701 ataatgcgtg ctttgcttaa atcgtatgga gtcatttcaa ccgttacttt atcaccggtt
    29761 aaaatacgaa tgtagttttt acgcattttg cctgaaatat gtgcggtaac aatatgaccg
    29821 ttttctaatt ccacacggaa cattgtattt ggtaaggttt ctaaaatcgt accttgcatc
    29881 tcaatgcaat cttctttagc catttattcc tctttaaagt tttaattttt atatgatgcc
    29941 attcggcgaa aaacggcgga tattatacgc ttattcgctc aaattacaat cgtttatcca
    30001 tttgagtgta aactatttac gcttaatcca acggcgacgt gagtgaaaac gctgggtttg
    30061 ggtttttact tgactcataa gtggttttgg gcttatctgt acatgatgaa ttttacgacg
    30121 aaaatagtag ttaatgctac ttgccaacaa tatacctgtg agtagcaaaa taattatttc
    30181 cccataaagt tgatgaaatt gttgctctac tcgtgcttta gtagtttgcc catattctgc
    30241 atcaaacgtg acgcgtaaaa agccaaccaa cgcctgttga gaaaatattg gctcaacaat
    30301 ttgctgagtt ttggcagatt gctctgaatc gagcaatact tttaaatctt tcgcattttg
    30361 gctttgagcc agtagcacgc catttggtga atagatattg gcatcaataa taaaatcttc
    30421 tttggcaaaa ctatccaacg catcaaccag ctcatcggtt ttggcatttt taactaacaa
    30481 aaacgaaaaa atatttgctt gctggcgaac caataggtgt gaaaggtttg atacttgatt
    30541 aatgctggcc aattgtgagc ctagcttaaa ttggtttacg cccattaaaa taaccgccac
    30601 gatcccacag cagagtagcg taatccctgc cagcaaaagc gttttcgtta ttttttcacg
    30661 actaatgtac atcgaaattc cctcaaaatg atgcgtgatt gtagcacgct tttctgttag
    30721 attagtgcag taaatttaaa caacctaaaa taagacaatg acaaacacaa tttttatcta
    30781 ttcaaaaacc ttaaacgagc gtgaaattga acagttttca caacaaacgg cagcaatttt
    30841 gctgaaacaa gcggtctatt tagactacaa aattgcattt ttttccacaa atttaaccgc
    30901 ttgcgagctg cgtgaaacgg cacagaaaat caatgcggat attagcgatc tcactattat
    30961 tccaacctta aaccaaggcg gtttgctatt aatggatatg gattccaccg ctattaaaat
    31021 tgaatgtatt gatgatattg ccaaacttgc cggcaccggc gaggtggtgt ccgccattac
    31081 tgccagtgca atgcggggcg agctggattt cgagcaaagt ttacgcaagc gagtcggcac
    31141 gttggaaaat gcatcggaaa gcattttgca aaaagtgcgg gaaaatctac cgcttatgga
    31201 cggctttgag cagatggttg ctattcttaa ggaacacggc tggaaattag cgattgcgtc
    31261 cggtggattt gattacttcg ccgattactt aaaacaaaaa tacgggttga attttgcggt
    31321 ctctaaccaa ctggaaatta ttgacggtaa attaaccggc aaggtgttag gcaaagtagt
    31381 ggatgctcaa cataaagccg ataccttaca gaatttagcg acaaccttta atattccacc
    31441 aaatcaatgg gtggcagtcg gcgatggggc aaatgactta ccaatgttaa aaaccgccag
    31501 tttaggcgtt gctttgcacg ctaaaccaaa agtgcaagca caagctgatt ttgtggtaaa
    31561 cttcggggac ttaacggcat tatgtttatt acttaatgcc aatcatttat ttcaacatta
    31621 attgagagga acaacaatgc catcatttga tattgtatct gaaatcacga tgcacgaagt
    31681 gcgtaatgcg gtagaaaatg ccaatcgtgt attaagcacc cgctacgatt tccgtggggt
    31741 ggaagccgtt attgagttaa atgaaaaaaa tgaaagcatt aagctcacga ccgaatcgga
    31801 tttccaatta gagcagttaa ttgagatttt aatcggctct tgtgtaaaac gtgggatcga
    31861 gcatagttca ttagatatcc ctacagaaag tgagcatcac ggtaaactct attccaaaga
    31921 aattaagctc aagcaaggga ttgagtcaga tatggcgaag aaaattacca agctgattaa
    31981 ggattctaaa atcaaggttc aagcccaaat tcaaggcgag caagtgcgtg taacgggcaa
    32041 atctcgtgat gatttacaag ccgcaattca gctagtgaaa ggggcagatt tagggcagcc
    32101 attccaattt aataatttcc gtgattagca attcctgcaa ttaatgatga caagtggaaa
    32161 aattcagcaa aatttgaccg cttgcattaa taattcaaca taaaaggaag agatgatgag
    32221 cgagcaaaca gaaaagaaag gctggtttaa aaaagccctt gagaaatatg atgccttttg
    32281 cgatgagcta ggggtaaatc aaggtgcttg ccgaggttgt gtccctgtgg tgaagtttga
    32341 ccctgaaccg gaaaaagagc agccagaaaa atcagaaaat aaaacataga aaaaatgcac
    32401 aatggtaaga tacattgtgc attttttata ggatttttaa ttggcgtgat gatgggcaaa
    32461 atattgctta actccgccat ctttcttgca aggattctga atatcagtag agtaactacc
    32521 gttaaaacaa agagcagtag cattcgatgg tttaatcttt tcctgtttag ttagggctgg
    32581 cggttgagta ttggtttcac taatatagat cgttttaggt tgagaatagt ctatattttt
    32641 gtcgccattt acgacttgaa cgggggtgtt cgagctgcaa gctacaaccg atgctgaagc
    32701 caatgtaagt ataatgatat ggtgtttttt catgggtaat ttccgttttt atatttttaa
    32761 ttgagagaat gttaaaaagg gctgatttct caacccttaa agttatgcct taagcatttt
    32821 tattaaaagt ttgtcctaac tgaatttcat catttaatac aggaattaac tgctctagtt
    32881 gatctttttc aaattcgctg agattgccga taggtagaac tttttccaca ccatttgtac
    32941 ctaaacgaat cgggtaagca aagaatgccg gagaggtttc gccattggca ttatctacat
    33001 aagcataacg aatgacatct tccccgatta aggctctcac taaaccaagt gcaaattctg
    33061 ctcctgcttg agccatagat aaggttgctg agccaccacc tgcttttgcc tcaaccactt
    33121 cagtaccggc gttttggata cgatgagtta attgctcgat ttgttcttga gtgaactcaa
    33181 gttttaagcc atttactgtt gcttgtgaaa gcagtggaag aatagttgtg ccggaatgtc
    33241 cgccaatcac aggcactctt acatatttca catttacgtc tttcgcttca gccacaaagg
    33301 tattcgctcg aataacatct aatgttgtaa caccgaaaag tttatttttg tcatacacac
    33361 cggctttttt caatacttct gccgcaatcg gaataatggt gtttaccggg ttagtaataa
    33421 ttgcaatgca agctttaggg caaactttcg ctgctttttc gactaagtta tgcacgatag
    33481 tggcattcgt attgaataaa tcggcacgtg tcatccccgg cttacgggca acaccagcag
    33541 aaataacgac cacatcggca tcttttagtg cctcagtcgg atcttcacct gcaaaaccgg
    33601 ttacttttac atcagttgga atatggctta aatccactgc aattcctgga gtaacagggg
    33661 aaatatcgta aagagataat tcagatttag ccggtaaatt gagttttaat aataaggcga
    33721 gtgattgacc gattccacct gcagcaccta aaagggcaac ttttttactt tgacacataa
    33781 aatttctcct aaatgttatg gaagtttaga ccaatttagt ctaagccaat tttttgggcg
    33841 attcaaacgg caaatctcat ttttgagaca tagagcaaat ttttagctga tttttatggg
    33901 ttttattgat ttatttgcat aaataagcaa gaattatgaa tatttttaag tttttgtgaa
    33961 taagagtgtg aaagtggaca agatagatag tttatcagaa gcgtttaaat cgctgttaaa
    34021 ggaagaaaaa ttcggctcgc aaagtgaaat tgttgccgca ctacaagaga tgggctttga
    34081 taatatcaac caatccaaag tttctcgaat gttatcaaaa tttggtgcag tcagaacccg
    34141 taatcctaaa atggaaatgg tgtatcagct accagtcgaa ttaagtgtac cgactacctc
    34201 cagcccactt aaaaatttgg tggtagatat tgatcataat gatgcgttaa ttgtggtcaa
    34261 aaccagcccc ggtgcggctc aactgattgc acgtttgctc gattcaatgg gtaaagccga
    34321 aggtatttta ggcactattg ctggcgatga tacgattttt ataacgccgg tacgcaatgt
    34381 gcaaattgaa aaattggtga agaatgtgac acagttattt gaaacatcat tatagaataa
    34441 gtaaaggagg acttaatgtt ctccttattt tttaggagat tattatgcac atttttataa
    34501 caggtggtac gggttttatt gggcgtgaat taatccagca attaaaatct gaaaatcacc
    34561 actttacact tcttactaga gatacagaag cgaaaagtga tgatttacag attaattatt
    34621 gctattcact tgatgaactt gttgatttaa atgattttga tgcagtaatt aaccttgccg
    34681 gtgagccgat ttttgataaa cgttggacag acgaacaaaa acagaaattg attgaaagcc
    34741 gggttaacct aacgaataag ctcagtcaat taatgaatgc aagctctaac cctccgcata
    34801 cttttctctc cggttcggca atcgggattt atggcgattt gcctccttct gcaaattttt
    34861 atacagaatc gaccgcttgt tatcaagatt gctttaccaa ccggctttgc caacagtggg
    34921 aagccgctgc actaaaagcc gcaagtgata aaacccgagt gtgtttaatt cgtaccggca
    34981 cggtattttc gcccgaaggc ggagcattaa agaaaatttt accgctttat cgatgcggat
    35041 taggcggaaa acttggttca ggcaaacaat attgggcgtg gatcagccgc cgggatcacg
    35101 tacaagcggt catttttctg ctcaaaaatg caaattgttc gggtgcttat aattttgttg
    35161 caccaaatcc ggtgagaaat gaagaattta atcgtatttt agcgaatgct gttaatcgcc
    35221 cggcattctt tactgtgcct gaatttgcct tgaaattagg cttaggcgaa cgagcttgtt
    35281 tagtcttaga taatcaacag ctcattccgg aaaaactact cgcagccagt tttgtattcc
    35341 aagatccgat tttaaccgag aacgttttct taaacccata atttaggcta taatgctgta
    35401 taaaagcaca gattaaaagg tgattatgga tttctcatta ttattagacg gtttaaatga
    35461 caagcagagg gaggcggttg ctgccccgat tggtaattat ttagtgttag ccggggcggg
    35521 ttcgggcaaa actcgggttt taacccatcg cattgcgtgg ctgattgggg tggaaaatgt
    35581 gccggaatcc aatattctgg ctgttacctt taccaataaa gcggcggcgg aaatgcgaca
    35641 tcggattgag tacactcttt cccaatcggg cgataatcga ttgttcggaa tgtgggttgg
    35701 tactttccac agcattgcca accgcttact tcgttcccac tatttagatg cggatttacc
    35761 gcaagatttc caaattatgg ataccgaaga tcagcaacgt ttactcaaac gtttactgaa
    35821 actgcataat attgatgaga aacattttcc gccaaaacac gttgcgtggt atatcaacgc
    35881 ccaaaaagat aaaggcaaac gggcaaaaga tattgatcac tataacgatc cgaatgaaaa
    35941 aaaattggtg gagatttacc aaatctatca agatgcctgc gaccgagccg gtttgttaga
    36001 ttttgccgag ctgttgattc gggcttatga actattcaaa accaaatcaa ccattttgca
    36061 acgttatcaa caacgttttc agcaaatttt gattgatgag tttcaagaca ccaacaatat
    36121 tcagtacgac ttaattcgtt tgcttgccgg cgatgtcggc aaagtgatga ttgtcggcga
    36181 tgatgatcag tctatttatg gttggcgtgg ggcacaggtt gagaatatcc aacgtttctt
    36241 aaatgattat gacaacgctc aaaccattcg cttagagcaa aattaccgct ctaccggcaa
    36301 cattttaagc tgtgccaatg aattaattgc caataacgat aaccgcttag gcaaaaattt
    36361 atggacagat agcggtgatg gcgagcctgt ggatatttac tgtgccttca acgaacttga
    36421 tgaagctcgc tttgttgcct cgcaaatcaa gcaatggaaa gaagacgagg gtgatttggc
    36481 ggaatgtgcg gtgttgtatc gcagcaacag ccaatctcgt gtgattgagg aagctttaat
    36541 tcaagcgaat attccttatc gcatttacgg tggaatgcga ttctttgaac gccaagaaat
    36601 taaagatgct ctggcttatt tacgcttaat cgccaatcgt caagacgatg cggcgtttga
    36661 acgggtgatc aacacgccaa ccagaggcat tggcgatcgt accttagaca cactccgtca
    36721 aattacccgt ggtcgccaaa ttacgctgtg gcaagcaatt caagtggcgg tgcaagaaga
    36781 acaactttca gggcgtgcca cttcttcctt attgcgtttt gtagagctga ttaatgctct
    36841 tgatcaagaa accgagcaga tgtcgcttgc cgaacaaacc gattttgtga ttaaaaaatc
    36901 gggtttatat gaaatgtata agcaagaaaa aggcgaaaag ggcgaagttc ggattgaaaa
    36961 cttagaagag ttagttaccg caactaagca gtttgtgaaa cctgacgaag cggaagagct
    37021 gaccgatctt accgcatttt taacccacgc ctcacttgag gctggagaag cccaagcctc
    37081 gcaacacgaa gattatgtcg aactgatgac gctacattcc gccaaaggat tggagtttcc
    37141 ccgtgtgttt attgtgggcg tggaagaagg gattttccca agcggaatga gctttgatga
    37201 aggcaggttg caagaagaac gccgtttggc ttatgtcggc ataacccgag ctaagaaaaa
    37261 actgacgatt agctatgccg aatcaagacg gctttatggt aaagaagaac gccacgttcc
    37321 gtctcgcttt attgctgaat tacctgaaga gcatattcga gaagtgagat tgagaggctc
    37381 aattaaccga gcggcaagtt ttaaccaagc taattcattt gcaaaaaatc cgacaaaaac
    37441 gaccgcttcc tttttaaacg atgatacttg gaaaatgggg cagaaagtga accacgctaa
    37501 atttggacaa ggcacgatta ttaatgtgga gggctcaggt gaagccaccc gtttgcaagt
    37561 tgcctttgtc ggcaacggca ttaaatggct gattgccaaa atggcaaatt tagagaggat
    37621 ttaggcgaat aaaaagtttt ttgcaggaat atagatggcg agatatattg ccccttaacc
    37681 ttaaactaag ggtaaataaa attaaataat gcaagctaga tataatgtaa agtatcagaa
    37741 ataagatatt aatttaagat aaagaatag
//
LOCUS       DANLTI010000007        36519 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.007, whole genome shotgun sequence.
ACCESSION   DANLTI010000007 DANLTI010000000
VERSION     DANLTI010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 36519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36519
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.007"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            3..989
                     /gene="pheS"
                     /locus_tag="PXB09_000300"
     CDS             3..989
                     /gene="pheS"
                     /locus_tag="PXB09_000300"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDL5232457.1"
                     /translation="MQHLKDLTNKAREALDKIDQNLEALEEFRVEYFGKKGHFTTLMQ
                     ELRNIAAEERPAIGAKINEAKQVVLDVLNAKKEEWEQAVLNAKLANESIDVSLPGRKT
                     ELGGLHPVSITIERVVKFFSELGFTVANGPEIETDYYNFDALNIPDHHPARADHDTFW
                     FDANRLLRTQTSGVQIRTMENVKPPIRIVAPGRVYRNDYDQTHTPMFHQIELLYVDKE
                     ANFTELKGLIHDFLKAFFEEDLQVRFRPSFFPFTEPSAEVDVMRQNGKWLEVLGCGMV
                     HPNVLRNVGIDPEEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK"
     gene            1037..3424
                     /gene="pheT"
                     /locus_tag="PXB09_000301"
     CDS             1037..3424
                     /gene="pheT"
                     /locus_tag="PXB09_000301"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDL5232458.1"
                     /translation="MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSG
                     VVVGEVVECAQHPDADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLPGD
                     FKIKKTKLRGQPSEGMLCSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEI
                     SLTPNRADCLSIAGIAREVGVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLA
                     RVVKNVNVKATSPLWLQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGI
                     QVRMAKEGEELVLLDGTNAKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLE
                     SAFFAPLAITGRARQYGLHTDASHRFERGVDPELTRQAMERATALLLEICGGEAGEIV
                     EAVSQENLPKRNTVTLRRSKLDSVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPS
                     WRFDIEIEEDLIEEIARIYGYNSIPNNSPLAHLTMKGTPEKLLEANRIRMALVDSDYQ
                     EVITYSFVDPKKQSLLHPQQEALILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNR
                     VRIFEAGLRFIPDSNAESGVRQEFVFGAAIVGDKRPVHWENKSEAADFFDLKGDIERI
                     LSLTSIRHDLQFVAKQFPALHPGQSAAIMLDGKEIGFIGTVHPSIVQKFGIKGKPIVC
                     EILASAIAERPVTQAGEISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLVAVNL
                     FDVYRGSNLESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLRD"
     gene            3482..3778
                     /locus_tag="PXB09_000302"
     CDS             3482..3778
                     /locus_tag="PXB09_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDL5232459.1"
                     /translation="MALTKIEIAENLIEKFGLEKRVAKQFVELFFEEIRSSLENGEEV
                     KLSGFGNFSLREKKARPGRNPKTGENVAVSARRVVVFKAGQKLRERVEQASSQS"
     gene            3817..4338
                     /locus_tag="PXB09_000303"
     CDS             3817..4338
                     /locus_tag="PXB09_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5232460.1"
                     /translation="MKLTKRWLSLGCLLAITAMLVACSSSDTTSKSQVKSKVYRSIYQ
                     SDLSDPIMAISRLSEHQHEWKGTRYRLGGNSKAGIDCSGFMQVTFKDLFGIDLPRTTT
                     EQAKAGERISKDELRTGDLVFFKTGRGPNGKHVGVYVKNGQFLHASTKGGVIYSDLDS
                     PYWSKAFWQARRL"
     gene            4354..5397
                     /gene="degS"
                     /locus_tag="PXB09_000304"
     CDS             4354..5397
                     /gene="degS"
                     /locus_tag="PXB09_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDL5232461.1"
                     /translation="MLKKIGQAVIFGLFCAILILFVAPIIQSKGSSFSLSAFTQKEIV
                     SYNAAVKIASPAVVNVYSRNFSSENETFEVKNLGSGVIMSSDGYILTNRHVIEDADQI
                     VIALQNGAISTNVKLVGDDSLTDLAVLKIEGENLPTIPQNPERKLQIGDVVLAIGNPL
                     NLGQSITQGIVSAIGRKTLTESGRQNFIQTDVSINQGNSGGALINTAGELIGINTLRF
                     GKNTNELSEGLNFAIPINLANQIMSKIIKDGRVIRGYFGVSTDLLDTAKMQGYEKGVI
                     IVNVDKNGPAAKAGIQAGDLVLKVGDIEAFSPSQMMEELAEMKPYTTVKVLVQRDEQL
                     LNFDVTITELQTQ"
     gene            5406..6080
                     /gene="cmk"
                     /locus_tag="PXB09_000305"
     CDS             5406..6080
                     /gene="cmk"
                     /locus_tag="PXB09_000305"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDL5232462.1"
                     /translation="MKKIVITVDGPSGAGKGTLCHALAEKLGFDFLDSGALYRITALS
                     AIKKEVPLDDEEKLAEVGRNLDIQFLPENGEIQVILEGENVGDLIRTAEAGQNASKVA
                     AFPLVREALLERQRAFSSEKGLIADGRDMGTVVFPDAQIKLFLDASAEERTKRRVKQL
                     QEKGFNANFDEILAEIKERDFRDRNRSVAPLVPAKDALLLDSTHLSIEDVINQALNHI
                     AQYIKF"
     gene            6172..7839
                     /gene="rpsA"
                     /locus_tag="PXB09_000306"
     CDS             6172..7839
                     /gene="rpsA"
                     /locus_tag="PXB09_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDL5232463.1"
                     /translation="MSELSFAQLLEESFAATPRLGDVVKGTVVAIQKGLVIVDTGFKS
                     ESAIDASEFTNAQGELEVQVGDEVDVVLKAVEDGFGATVVSRGDAKRNEAWIALEKAF
                     EEQATVIGFVNGKVKGGFTVELNGVRAFLPGSLVDTRPVRDSLNLEGKEYEFKVIKLD
                     QKRNNVVVSRRAVIETESNQDRDAVLANLVEGSEVKGTVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEVVNVGDEVTVKVLKFDKDKTRVSLGLKQLGQDPWAVIAENHPV
                     NSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLE
                     VDEERRRISLGLKQCKANPWEQFAATHSKNDKVSGKIKSITDFGIFIGLEGGIDGLVH
                     LSDISWNVSGEEAVRNYKKGDEVEAVVLQVDAVKERISLGIKQLESDPFTNFVDGTKK
                     GAILTGKVVEVDAKGVKVELEGGVEAFIRANEATAERVEDITSVISVGDSIEAKYTGV
                     DRKSRVVNLSVRAKNEAEESAAIAQVNKEEVVVPNAFAEAFKAAKGE"
     gene            7968..8249
                     /locus_tag="PXB09_000307"
     CDS             7968..8249
                     /locus_tag="PXB09_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDL5232464.1"
                     /translation="MTKSELIESLASKNPSLPIKMVEHCVKELLEQLTATLEEGERIE
                     VRGFGSFSLHYRQPRLGRNPKTGESVLLGAKYVPHFKAGKDLKERVDLL"
     gene            8286..8573
                     /locus_tag="PXB09_000308"
     CDS             8286..8573
                     /locus_tag="PXB09_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HDL5232465.1"
                     /translation="MIKYILGILIVIAVIIVAVTIGANNDQLITFNYIFAQSELRLST
                     LVAILFGLGLILGWLVTGIFYLKIKFQNVALNRRVKRQAQQITELTTPKAE"
     gene            8577..9773
                     /gene="lapB"
                     /locus_tag="PXB09_000309"
     CDS             8577..9773
                     /gene="lapB"
                     /locus_tag="PXB09_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDL5232466.1"
                     /translation="MLELLFLLLPIAALYGWYMGQRSAKKDQETASNKFSREYVTGLN
                     FLLSNQQEKAVDLFLSMLQKQESENHIASESQFEAELTLGNLFRSRGEVDRALRIHQT
                     LVNSPHYSFDQKLLAKQQLAKDFMVAGFYDRAENYYISLVDEPEFAKYSLSQLAVIYQ
                     KTREWKKAINVTEKRLRIEPDADKIPLSHFYCEYAQGVKFDDKAAFIESLNKALEYYP
                     QSTRASIILGDFYLEEGEYLRALSYFEQILVQDPDYISEVLGRIKQSYMALEDLNGYE
                     LFLIRANRVKHNSSVDIALTEFIEEKDGINAAHSKLYQQLSTYPNLITFHRFIRYQAD
                     FAEEGNGKESLVLLHNMVGNQIKRSFQYRCLNCGYQSYRLMWQCPSCNQWEKIKPVQS
                     IEGIIQ"
     gene            9797..10489
                     /gene="pyrF"
                     /locus_tag="PXB09_000310"
     CDS             9797..10489
                     /gene="pyrF"
                     /locus_tag="PXB09_000310"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDL5232467.1"
                     /translation="MNNKVIVALDYETEREALEFVDLVDPSLCRLKVGKEMFTTLGTN
                     FVKQLHERKFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLAMMEEAKKIL
                     EPYGKEAPLLIAVTVLTSMEDLDLLQIGINASPMEQVIRLAHLAQRAGLDGVVCSPQE
                     VEVLRTHCGQDFKLVTPGIRPKGTDFGDQRRVMTPKQAVETGSDFLVIGRPITQAQDP
                     LAVLKSINQSIS"
     gene            10572..10883
                     /gene="yciH"
                     /locus_tag="PXB09_000311"
     CDS             10572..10883
                     /gene="yciH"
                     /locus_tag="PXB09_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDL5232468.1"
                     /translation="MTLVYSTETGRIKSEVIKEERPKGDGIVRIQRQTSGRKGKGVCL
                     ITGLDLEDKALNSLASELKRKLGCGGSFKDGVIEIQGDNRGFIKQILEQKGFKVKLAG
                     G"
     gene            10986..13148
                     /locus_tag="PXB09_000312"
     CDS             10986..13148
                     /locus_tag="PXB09_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDL5232469.1"
                     /translation="MWKKTLIAVFLASQYAFAVGTGKEPSKSYTETELKQLKNDWLAI
                     YQKELQYAENLRLKQRENFQQINYLADAAISQKNLSLSTEQIIQRLLLTLAGYPLEMK
                     AEWKLLNAKITLKQATESEVKAFISKYPDSLYQRQLQNLMFELLYREQKFPELLEYAQ
                     NVKQSSLADQCRLFSARYELAASKAQINPEVSQVTEQKAENAELLALVQEFDRFWLAT
                     PKLTSDCANLESYWRDQGLKTDEKMRLKAVELIKQNANAELANLAANVNNENLKIWLS
                     SVEKVANNPADLQNFIENQPLDSPFYADNKAIIQQLFAKYVRTLSENMENPSFQQYQT
                     WAEKYQLSSEEINGWKNAFITRFFDNPEPTFQFWRDEQIKLLKTDNLTERRLRMAIWQ
                     KADLNEWLVLLSQQAKEKAEWRYWAAKEEKNEAKRKVDFESLAKERGFYAMLAAQQLG
                     IVYQIPMLEVPELTQAQLELYANQLARIQELRELGQFDQARKIWIDWIKNIKPEAGEN
                     TPTKIQLALIKYAKDKNWYDLAVEGTIQTKAFDYLDLRLPNAYSDWFDLHLQDKKISK
                     TFAQAIARQESAWNAQAQSHANARGLMQLLPTTAQKTAKDNGLTFKDGNDLFQPFNNI
                     MLGTTHLMELNEKYPNNRILIASAYNAGAGRVEQWLKRSNGQLAMDEFIASIPFYETR
                     GYVQNVLAYDYYYQMLYSDINDKNGLKMFYQEELTRKY"
     gene            13197..13273
                     /locus_tag="PXB09_000313"
     tRNA            13197..13273
                     /locus_tag="PXB09_000313"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13231..13233,aa:Met,seq:cat)
     gene            13500..13961
                     /gene="rimP"
                     /locus_tag="PXB09_000314"
     CDS             13500..13961
                     /gene="rimP"
                     /locus_tag="PXB09_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDL5232470.1"
                     /translation="MATLEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE
                     GGVTIDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVI
                     HLRIPMFDRRKWQGKIKQVEGDFITLTVENEDRQFAFGNIQKANLVPVFNF"
     gene            13982..15478
                     /gene="nusA"
                     /locus_tag="PXB09_000315"
     CDS             13982..15478
                     /gene="nusA"
                     /locus_tag="PXB09_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDL5232471.1"
                     /translation="MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDID
                     VRVVVDRKTGDFQTFRRWAVVENVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEF
                     GRVAIQTFGQVVKTKIREAEKTKIIDEFRSDLGKIILATVKKVTRDNIFLELQGKSED
                     IKGEAVIVREDMIPRENFRPGDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEV
                     PEIGEGVIEIKGSARDVGSRAKIAVKTHDKRIDPVGACVGMRGARVQAISNELGGERV
                     DIVLWDENPAQFVINAMAPADVSSIVINDETHSMDIAVEAKNLAQAIGRNGQNVRLAT
                     QLTGWALNVMTVEELTKKSEEEDGKVINLLTSALEIDEEFAQVLIEEGFTSLEAIAYV
                     PVDTLTAIDGLEDEDLVEELQSRAKNAITKKALEEEKLLKSAQIEEKLLTLEGMDRHI
                     AFKLAEKQITTLEELAEQGVDDLADIEELSEEKAGELIMAARQICWFN"
     gene            15463..18030
                     /gene="infB"
                     /locus_tag="PXB09_000316"
     CDS             15463..18030
                     /gene="infB"
                     /locus_tag="PXB09_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDL5232472.1"
                     /translation="MLVQLSKEDNKMTEEKKTLSLGGARKASKVNTTTTSGKVKAVEV
                     KEKKPKIDAKALQEKAAKEAAAAKARAEKEAAEKLAKEKAEAEAKEKAAKKAAESTAS
                     KPISVPVMPSSKAKEEKPKAQQVQPKQEKAVDPEKEAKRKEEAELRRKQEELAQQKAE
                     MEAKRAAENARRLAEIAREEAEDNGNEDFDDERFTSSYAREAERDNDRRSEGNRGRNG
                     KGNVAKAKKGGREEDKNERSADRRNHKEVKGKGKQGKKGAALQQAFTKPAQVVKADVV
                     IGETITVAELANKMAVKATEIIKMMMKMGEMVTINQVIDQETAQLVAEELGHKVILRK
                     ENELEEAVLEDRDTHAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGITQH
                     IGAYHVETDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ
                     HAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHEVISEKFGGDVQFVPVSAKKGMGID
                     DLLEAIILQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLNKGDIVLCG
                     FEYGRVRAMRDENGKDVESAGPSIPVEVLGLSGVPAAGDEATVVRDEKKAREVALYRQ
                     GKFREVKLARQQKAKLENMFSNMAAGDVAELNIIVKADVQGSVEAISQSLMELSTDEV
                     KVKIVGSGVGGITETDATLAAASNAIMVGFNVRADASARRVIENENIDLRYYSIIYEL
                     LNDVKAAMSGMLQPEFKQEIIGLAEVRDVFRHPKFGAIAGCMVTEGIVKRNNPIRVLR
                     DNVVIFEGELESLRRFKDDVSEVRNGMECGIGVKNYNDVKVGDQIEVFEVVEVKRTI"
     gene            18115..18495
                     /gene="rbfA"
                     /locus_tag="PXB09_000317"
     CDS             18115..18495
                     /gene="rbfA"
                     /locus_tag="PXB09_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDL5232473.1"
                     /translation="MSREFKRSDRVAQELQKEVAVILQREVKDPRIGMVTVSDVEVSR
                     DLAYAKIFVTFLFDNDAEAIKQGMQGLEKASPYIRTLLGKAMRLRIVPELRFIYDESL
                     VEGMRMSNLVSSVIKNDEEKHKED"
     gene            18498..19421
                     /gene="truB"
                     /locus_tag="PXB09_000318"
     CDS             18498..19421
                     /gene="truB"
                     /locus_tag="PXB09_000318"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDL5232474.1"
                     /translation="MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIFQANKAGHT
                     GALDPLATGMLPICLGEATKFSQFLLDSDKRYLVTAKLGERTDTSDAEGQVVETKAVA
                     VTKSQILAALEKFRGDILQVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNF
                     IEYKAPFLTLEVHCSKGTYIRTLVDDLGEELGCGAHVTMLRRTAVADYPIEKMMSYAD
                     LQNLAENQPLAELDQHLLPMDTAVSALAKINLSSEQTKAVGFGQRIRFDNLNQLYGLV
                     RLYSEDEQFLGVAEITNDTVIRPNRMINLTE"
     gene            19424..20504
                     /locus_tag="PXB09_000319"
                     /pseudo
     CDS             19424..20504
                     /locus_tag="PXB09_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
     gene            complement(20542..21066)
                     /gene="tadA"
                     /locus_tag="PXB09_000320"
     CDS             complement(20542..21066)
                     /gene="tadA"
                     /locus_tag="PXB09_000320"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDL5232475.1"
                     /translation="MFIKPNQTSCPLQISEQDIAFMQYALDLADLAEAKGEIPVGAVL
                     VDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQTLGNYRLLDCTLYVTLEPCPMCA
                     GAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHFLEVHGNVLGRECSQKISDFF
                     KQRRLQKKGDALIK"
     gene            complement(21148..22956)
                     /locus_tag="PXB09_000321"
     CDS             complement(21148..22956)
                     /locus_tag="PXB09_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDL5232476.1"
                     /translation="MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGR
                     DVLGMAQTGSGKTAAFSLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMK
                     GIRVVTVYGGQRYDIQLRALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADE
                     MLRMGFIDDVETVMAELPETHQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAP
                     DIEQSYWLVNGFRKNDALLRFLEVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALN
                     GDMTQQAREQTLDKLRSGRLDILVATDVAARGIDIERISLVINYDIPLEEESYVHRIG
                     RTGRAGRSGRALLFVEPRERRLLRNIENLIKKPINEVAIPNHEILMEKRREKFKARIS
                     KQLEHHDLEKYRELLEDLFTADQDHEELAAAMMMLLQEKQKLILPPDPVVRAARSERG
                     RDRNERNDRRNGREHRENNGVAMDLYRIELGREDGVEVRHIVGAIANEGDISSRYIGH
                     IKLYDKYSTIELPQGMPNHLVQHFAHKARVLSKPMQMTLLGSANSASNANPFEGRGRR
                     GNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGRRD"
     gene            complement(23158..24081)
                     /gene="nlpI"
                     /locus_tag="PXB09_000322"
     CDS             complement(23158..24081)
                     /gene="nlpI"
                     /locus_tag="PXB09_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDL5232477.1"
                     /translation="MVQLFKLFRIRFLLLNLISVLMLSGCTSRYADLVSIKNLALAEL
                     NPQLRFEQEAMVVRLSQVLEEAPLTPSEQADLYFERGVIYDSLGLWSLARYDFAQAIS
                     LNQRMAAAYNYMGLYLLLEGDYDSSIDAFNAVLELDREYSYTYLNRGLAFYYSGRYSE
                     AQRDLLHFYEEDKKDPYRALWLYFNELEFTPTEAKNNLQKRANNLSSDYWGTNIVNYF
                     LGKLNLAQVRAIMERDAKENSSQYAEILTETYFYLAKQQLKLDHKDEAISLFRLALAN
                     QVFNFVEYRFALFELSQIRGMTQTTPVVDKE"
     gene            complement(24162..26312)
                     /gene="pnp"
                     /locus_tag="PXB09_000323"
     CDS             complement(24162..26312)
                     /gene="pnp"
                     /locus_tag="PXB09_000323"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDL5232478.1"
                     /translation="MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVV
                     AKKDVKEGQDFFPLTVDYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLF
                     PEGFFNEIQVIATVVSVNPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQF
                     VLNPTTSEQKISRLDLVVSGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENI
                     KEFVKEAGKPRWDWVAPEPNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAEV
                     IAQLTAEDETVSEGTIIDIITALESQIVRSRIIAGEPRIDGRTVDTVRALDICTSVLP
                     RTHGSALFTRGETQALAVATLGTERDAQIIDELTGEKSDRFLFHYNFPPYSVGETGRI
                     GSPKRREIGHGRLAKRGVLAVMPTAEEFPYVVRVVSEITESNGSSSMASVCGASLALM
                     DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDI
                     KIEGITPEIMRIALNQAKGARMHILGVMEQAIPAPRADISDYAPRIHTMKIDPKKIKD
                     VIGKGGATIRALTEETNTSIDIDDDGTVKIAATDGNAAKAVMARIEEIVAEVEVNQIY
                     NGKVTRVVDFGAFVSILGGKEGLVHISQITNERVERVADYLTVGQEVQVKVVEIDRQG
                     RIRLTMKDINNTNEANAEETVAENVVETEQENNF"
     gene            complement(26574..27854)
                     /gene="phoR"
                     /locus_tag="PXB09_000324"
     CDS             complement(26574..27854)
                     /gene="phoR"
                     /locus_tag="PXB09_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDL5232479.1"
                     /translation="MKVKLSLKHFLLELLLAAAVAGVFNLFFPAYFFWFSFCLLVLLI
                     WHHHTESSLLQLLRPNEQSGRSKVTTMEHLSQSAAFYHERLRQDKIKTLRLLSKLNKH
                     IQYLPDAIIICQENGEISWCNNVAQELFEFYWDKKSNKSIFNVIFYPEFKSYFRQQRH
                     HRPLVLLTHNKRYIELNLNRYDSNSRLIVARDVTSFVRLMHSRQTFLANMNHELRTPL
                     TILQGYLEMLENEPHNMALQQKALNAMKEQSQRMTNLLRQLSLLVKIEHSNDSEHNEV
                     QMSALISAIQKNTEILSQNQQILFDIEPNLTVWGDQEQLQSAVSNLIYNAIRHAGEGV
                     TIQICCQRDNQEPNTAIFSVQDDGIGIDAHHITHLTERFYRVDESRSNKTGGSGLGLA
                     IVKHALEQHHSTLEIESEAGKGSRFSFKLPLIKK"
     gene            complement(27857..28543)
                     /gene="phoB"
                     /locus_tag="PXB09_000325"
     CDS             complement(27857..28543)
                     /gene="phoB"
                     /locus_tag="PXB09_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDL5232480.1"
                     /translation="MNNKILIVEDERAIREMLSLYLSKQYQVIEAEDYQSAINKLGEK
                     PELILLDWMMPGRSGIHLIKYLKKQPETEKIPIIMLTARSSEEDCITGLNAGADDYIT
                     KPFSPQVLLARIEAVWRRSYDPPSNLINIDGLILDQQAQRVLVAEQEVKLSGTEYKLL
                     HFLMTHPEKVYRREQLLDFIWGNDIYVEDRTVDSYIRRLRKSLEPYGFERYIQTVRGS
                     GYRFSNHFQD"
     gene            complement(28627..29397)
                     /gene="pstB"
                     /locus_tag="PXB09_000326"
     CDS             complement(28627..29397)
                     /gene="pstB"
                     /locus_tag="PXB09_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDL5232481.1"
                     /translation="MLPTDLETKLHINNLNFYYGDFHALKNINMRIAKNKVTAFIGPS
                     GCGKSTLLRTLNRMFELYPNQRATGEINLDGENLLTSDTDISIIRAKVGMVFQKPTPF
                     PMSIYDNVAFGIRLFEKLPKSELNDRVEWALTKAALWNEVKHKLNQNGDSLSGGQQQR
                     LCIARGIAVKPEVLLLDEPCSALDPISTMKIEELINELKHDYTVAIVTHNMQQAARCS
                     DYTAYMYLGELIEFGDTKQIFDKPKFRQTEDYIKGKMG"
     gene            complement(29407..30255)
                     /gene="pstA"
                     /locus_tag="PXB09_000327"
     CDS             complement(29407..30255)
                     /gene="pstA"
                     /locus_tag="PXB09_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005650601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDL5232482.1"
                     /translation="MKNYQNRRFYCRKIKNVLMLSLAYSAVLFGLFWLVWIIVTLLQK
                     GIPALSWELFTRPTPAPNETGGLRNAIVGSILIVSTATLIATPIGILAGTYLSEYGRY
                     TKLAKFTRFLNDVLLSAPSIIIGLFIYAIYVAQVKHYSGWAGSLALAVLVIPIVVRTT
                     DSMLNLVPNNLREAAAALGCPRWRVITMISYRAARSGIITGVLLAVARISGETAPLLF
                     TALSNQFASLDMNAPMANLPVVIYQYAASPFADWNTLAWAGAMLITLFVLSLNIITRL
                     YFSKTK"
     gene            complement(30252..31211)
                     /gene="pstC"
                     /locus_tag="PXB09_000328"
     CDS             complement(30252..31211)
                     /gene="pstC"
                     /locus_tag="PXB09_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDL5232483.1"
                     /translation="MHKHKIDNKCLNHPWVEGLFHHTTRFFALLVFALLVVVLVSLLL
                     GSWEALSRFGVSFLWENEWNPVNDRYGALVPIIGTLISAGIALVIAVPVSFGIATFLT
                     ELAPQWLKRPVGTAVEMLAAIPSIIYGMWGLFVFVPLFQEYVQPYLIDTFGQLPFIGM
                     LFSGAPFGIGLFSAGLVLAIMIIPFIASIMRDVFSVVPPLLKESAYGLGSTTWEVIWK
                     VVLPYTKTGVIGAIMLGLGRALGETMAVTFVIGNAFMLPDSVFSPSTSIASAIANEFN
                     EAGGLQKSALMSLGLILFLITSIVLAASRLLIARMGKQEGKRE"
     gene            complement(31292..32329)
                     /gene="pstS"
                     /locus_tag="PXB09_000329"
     CDS             complement(31292..32329)
                     /gene="pstS"
                     /locus_tag="PXB09_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005756281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDL5232484.1"
                     /translation="MAKRFKLLTVLGISFSLSVAANAQTITGAGASFPYPIYAKWAGL
                     YEKETGNKINYQSIGSGGGQQQIIAKTIDFGASDDPMKGETLAEHKLLQFPAIIGGTV
                     PVVNIPELKSGELKLSGKVLADIFLGKITQWNDPAIVALNQDIALPAKTILVVRRSDG
                     SGTTFGWTNYLSKVSAEWKEKVGEGKSVKWPVGQGGKGNEGVAAYVKQLKYSIGYVEY
                     AYAKQNALAWVSMQNADGKFVQPSRETFAAAAANADWSQTAGMGVILTNEAGEKAWPI
                     TAASFILIHQHSDKPEQTKGVFKFFDWAFKHGKDAAAELDYVPLPDNVVEKIQTQWKT
                     EVKDGQGNSLY"
     gene            32514..34760
                     /gene="parC"
                     /locus_tag="PXB09_000330"
     CDS             32514..34760
                     /gene="parC"
                     /locus_tag="PXB09_000330"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDL5232485.1"
                     /translation="MTTEINYEGIEQMPIKRFTEDAYLNYSMYVIMDRALPFIGDGLK
                     PVQRRIIYAMSELGLNASAKYKKSARTVGDVLGKFHPHGDSACYKAMVLMAQPFSYRY
                     PLVDGQGNWGAPDDPKSFAAMRYTESKLSKIAEILLGELGQGTVDYQPNFDGSLEEPK
                     YLPARLPHILLNGTMGIAVGMATDIPPHNINELADASVMLLDNPKATLDDVLSVVQGP
                     DYPTEAEIITPKAEIARMYEQGRGSIKMRAVWKKEEGEIVISALPHQASPSKIIEQVA
                     TQMRNKKLPMVDDIRDESDHENPIRIVIVPRSNRIDFDALMDHLFATTDLEKSYRVNM
                     NMIGLDGKPAVKNLLTILNEWLSFRRTTVTRRLNYRLDKILNRLHILDGLMIAFLNID
                     EVIEIIRNEDEPKAELMARFNLTDVQAEAILNLRLRHLAKLEEHQLQAEKSELEKERD
                     ELQLILGSERRLNSLIKKEIQADAKAFASPRRSPLVERAESKAIAESDLTPTEDVTVI
                     LSEKGWVRCAKGHDIDVQALSHRAGDGYLAHARGRSNQPVVFLDSTGRAYALDPTSLP
                     SARSQGEPLTGKITLPEGAVVQQVLMASPETKVLMASDSGYGFICTFADLVSRNKAGK
                     AVISLTENAKVLPPQLLENDENLSLVAMSNVGRMLVFPVSELPQLSKGKGNKIINISA
                     AAAKSGDEYLARLLVIKPTNSLVFVSGKRKITLKPSDVDNYRGERARKGSQLVRGLST
                     NSTVEIVE"
     gene            complement(34831..36183)
                     /gene="lysC"
                     /locus_tag="PXB09_000331"
     CDS             complement(34831..36183)
                     /gene="lysC"
                     /locus_tag="PXB09_000331"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDL5232486.1"
                     /translation="MSHLSVAKFGGTSVANFDAMTSSANIVIADANTRVVVLSASAGV
                     TNYLVELANGCEKEHRDEVIAAVRQIQYNIIEKLQHQDAVKAEIDELLERIETLAESA
                     SLATSAALSDELISHGEMMSTKIFTQLLIERGHPAVWVDVRDVVATNSHYGKAAPNDE
                     KTQQQSDNVIKPLIASGKIVITQGFIGRDDEGKTTTLGRGGSDYSAALLAEVLNANDV
                     LIWTDVPGIYTTDPRVVPNAQRIDTMAFNEAAEMATFGAKVLHPATLLPAVRSNIPVY
                     VGSSKAPEQGGTWVTRDPQPRPTFRAIALRRNQILLTLSSLSMLHAQGFLANVFAILA
                     KHKISVDVITTSEVSVALTLDKTGSASSGADMLSAELLDELNAYCNVQVESDLALVAI
                     IGNNLHAQSGVAKKLFHTLENYNIRLISYGASSNNVCTLVKNAEADDVVRSLHKGLFE
                     "
BASE COUNT        11053 a         6885 c         8212 g        10369 t
ORIGIN      
        1 taatgcaaca cctaaaagat ttaactaata aagcacgtga agctttagat aagattgatc
       61 aaaatttaga ggctttagaa gagtttagag tcgaatattt tggtaaaaaa gggcatttta
      121 caacgttaat gcaagaatta cgcaatattg cagcggaaga aagaccggca atcggagcaa
      181 aaattaatga agcaaagcaa gttgtgcttg atgtgttaaa tgccaaaaaa gaagaatggg
      241 aacaagctgt attaaatgca aaattagcta atgagagcat tgatgtttca ctgccggggc
      301 gtaaaactga attaggtggt ttgcaccctg tttctatcac tattgagcgt gtggtgaaat
      361 ttttctctga attaggtttt accgtagcaa acggacctga aattgaaacc gattactata
      421 acttcgatgc gttaaacatt ccggatcatc atccggctcg agcggatcac gatacgtttt
      481 ggtttgatgc caatcgttta ttaagaaccc aaacctcggg tgtgcaaatc cgtacaatgg
      541 aaaatgtaaa accgcctatc cgtattgtgg caccggggcg tgtatatcgt aatgactacg
      601 accaaaccca cacaccgatg tttcaccaaa tcgaattgtt atatgtggat aaagaagcaa
      661 actttaccga gttaaaaggc ttaattcacg attttctcaa agcattcttt gaagaagatt
      721 tacaagtgcg tttccgcccg tcattcttcc cattcactga gccttctgca gaagtagatg
      781 taatgcgtca aaacggcaaa tggttagaag tgttaggttg cggtatggta cacccgaatg
      841 tgttacgcaa tgtagggatt gaccctgaag aatatagcgg ttttgctgtg ggaatgggcg
      901 tcgagcgttt aacgatgtta cgctacaatg tcacggattt acgttcattc tttgaaaatg
      961 acttacgttt cttaaaacaa tttaagtaat acaagcggtt aaaaatttag aaaattttac
     1021 aaataggata gaaataatga aattcaatga atcttggttg cgtgaatggg taaacccagc
     1081 aattagcaca gaacagttat gcgaccaaat tacaatgtta gggttagaag ttgacgatgt
     1141 agagccggta gctggtgcgt tttcgggtgt agttgtgggt gaagtggtgg aatgcgccca
     1201 gcacccggat gctgacaaat tgcgtgtcac taaagtgaat gttggtggcg aacgtttatt
     1261 agatattgtt tgtggtgcac caaactgccg tcaaggttta aaagtggctt gcgctgttga
     1321 aggtgcagtg ctaccgggcg atttcaaaat taagaaaacc aaattgcgtg gtcagccttc
     1381 agaggggatg ttatgttctt actcagaact tgggattaaa gaagatcata gcggtattat
     1441 tgaattacct gctgatgcac ctattggtca agatttccgt gaatatttaa atttaaatga
     1501 tgtggcgatt gaaatcagcc ttacgccaaa ccgtgccgac tgcttaagca ttgccggcat
     1561 tgctcgtgaa gtgggggtga ttaaccgtgt cgatgtgaaa gctccaacta ttacagatgt
     1621 aaaagccacg atttcagata aagtttcagt ggaattacaa gcaccggagg cttgccctcg
     1681 ctatttagcc cgtgtggtga aaaatgtgaa tgtcaaagcg acatcgccac tttggttaca
     1741 agaaaaatta cgccgttgtg ggattcgctc aatcgatcca atcgttgata ttactaactt
     1801 gagcctttta gaattagggc agccaatgca cgcctttgat gcagcgaaaa ttgaaggtgg
     1861 cattcaagtg cgtatggcaa aagaaggcga agaattggta ttgctagatg gcacaaacgc
     1921 taaattacaa tcgaatacct tagtgattgc tgatagcaaa ggggcattgg ctatggcagg
     1981 tattttcggt ggcgaagcca gcggggtgag cgagaatacg aaagatgtgg tgttagagtc
     2041 tgcatttttt gctccattag cgattaccgg tcgcgctcgt caatatgggt tacataccga
     2101 cgcatcacac cgttttgagc gtggggttga tccagaatta actcgtcaag caatggagcg
     2161 tgcaacggca ttattactgg aaatttgcgg cggtgaagca ggtgaaattg tggaagccgt
     2221 gagccaagaa aacctaccaa aacgcaatac tgtcacgctt agacgcagta aattagattc
     2281 ggtgattggt catcatattg acgatgcaac ggtaaccgat attttaaccc gcttaggctt
     2341 gaacgtaaca tttgcggata atagttggac ggcaattgct ccaagttggc gttttgatat
     2401 tgaaattgaa gaagatttaa ttgaagaaat cgcgcgaatt tatggctaca acagtatccc
     2461 aaataattcg ccacttgctc atttaacgat gaaaggtacg ccggaaaaat tactggaagc
     2521 aaaccgtatt cgtatggcat tggtagatag tgattaccaa gaagtgatta cttatagctt
     2581 tgttgatccg aaaaaacaat cattattgca cccacagcaa gaagccttga ttttaccaaa
     2641 cccgatttca agtgaaatgt cggcaatgcg tgtttctctt ttaaccggtt tgttggacac
     2701 tatcgtgtat aaccaaagcc gtcagcaaaa ccgtgtgcgt atttttgaag caggtctacg
     2761 ttttattccg gatagcaatg cggaatcagg cgtgcgtcaa gaatttgttt ttggtgcggc
     2821 gattgtaggc gataaacgtc cggtacattg ggaaaacaaa tcagaagcag ccgatttctt
     2881 tgatttaaaa ggcgatattg agcgtattct ttctttaacc tctatccgcc acgatctgca
     2941 atttgtcgca aaacagttcc cagcattaca cccggggcaa tcggctgcga ttatgcttga
     3001 tggcaaagaa attggtttta tcggaactgt tcacccgtca attgtgcaaa agtttggcat
     3061 taaaggcaaa ccgattgtat gtgaaattct agcatcagct attgcagagc gtccggttac
     3121 acaagcgggc gaaatttcta aatttcctgc aaataaccgt gatattgcgg tagtggttga
     3181 tgaatctgtt cctgcaggtg aggtgttaga ggcttgtcgt aaagctggtg gtaataaatt
     3241 agtggcagta aatttatttg acgtttaccg tggttcgaat ttagaaagtg gtaagaagag
     3301 tttagccatt agcttaacgg ttcaagataa tgaaaaaaca ttagaagaaa atgaaatcaa
     3361 tgcggtaatt caagcggtat tagctgaatt agcaacacgt ttcaatgcgg tacttcgtga
     3421 ttaatcagta aaatatggct gatttatttt atcagccata acaataaact aaggataaat
     3481 gatggcgctt accaagattg aaattgcaga aaacctgatt gaaaaatttg ggttagaaaa
     3541 gcgtgtagcg aagcaatttg ttgaattgtt ctttgaagag atccgatcct ccctcgaaaa
     3601 tggtgaagaa gtgaaattat ctggttttgg taatttttca ctgagagaaa aaaaagctcg
     3661 tccaggaaga aatcctaaaa cgggggaaaa tgtggctgtt tcagcccgtc gagtagtagt
     3721 ttttaaagct gggcaaaaat tacgagaacg tgttgagcaa gctagctccc aatcataggg
     3781 gcagttatat tagttagatt taatgtggag taataaatga aattaaccaa acggtggctt
     3841 tccttaggtt gtttgttagc tattacagcg atgttagtgg cttgttcaag ttcagataca
     3901 acctctaagt ctcaagtaaa aagtaaagtt tatcgttcaa tataccaatc agacctttct
     3961 gatcctatta tggcaattag tcgattaagt gaacatcaac acgaatggaa aggcactcgc
     4021 tatcgtttag gtggcaatag caaggctggc atcgactgtt ctggttttat gcaagtcact
     4081 tttaaagatc tttttgggat agatttgccg agaaccacca cagagcaggc taaggctggt
     4141 gagcgtatat ccaaagacga attgcgtaca ggtgatttag tttttttcaa gacagggcgt
     4201 ggtccaaatg ggaaacacgt tggtgtttat gtaaaaaatg ggcaatttct tcacgcctca
     4261 acaaagggag gggtgattta ttctgatttg gattcgccat attggtctaa ggctttctgg
     4321 caggctcgtc gtttataatt tagggtaaca tacatgctga aaaaaatcgg acaagcggtc
     4381 atatttggac ttttttgtgc aattttaatt ttgtttgtag ctccaattat tcagagtaaa
     4441 gggagttcgt tttcattatc agcattcact caaaaagaga ttgtaagcta caatgcagcg
     4501 gttaaaatag cctcccccgc agtcgttaac gtatatagcc gaaattttag ttctgaaaat
     4561 gaaacatttg aagttaagaa tttaggttcg ggtgtgatta tgagtagcga tggctatatt
     4621 ttaactaaca ggcatgtgat tgaagatgcg gatcaaatcg tgattgcttt gcaaaacggt
     4681 gctatttcga ctaatgtaaa attagtcggc gatgattctt taactgattt agctgtttta
     4741 aaaattgagg gtgagaattt acctactatt ccacaaaatc cggagcgcaa actacaaatt
     4801 ggcgatgtgg tgttggcaat tggtaatcct ttgaatttag gacagagcat tacgcaaggg
     4861 atagtcagtg ctattgggcg aaaaacctta acagaaagtg gtagacaaaa ttttattcag
     4921 acagatgttt ccattaatca agggaactca ggtggtgctt taattaatac tgctggtgag
     4981 ctaataggta ttaacacttt gcgttttggg aaaaatacga atgaattgtc agagggccta
     5041 aattttgcga ttcccattaa tctggcgaat caaattatga gtaagatcat taaagatggc
     5101 cgagttattc gtggctattt tggggtaagt acagatttgc ttgacaccgc aaaaatgcaa
     5161 ggttatgaaa aaggggtgat cattgttaat gtagataaaa atgggccagc cgcaaaagcg
     5221 gggattcaag caggtgactt agtgcttaaa gtcggagata ttgaggcatt ctctccttct
     5281 caaatgatgg aagagcttgc tgaaatgaaa ccttatacta cagtaaaagt attggttcaa
     5341 cgtgatgaac aattacttaa ctttgatgta actattactg agttacagac tcaatagggt
     5401 agaaaatgaa aaaaatagtg attacagttg atgggccgag tggtgcaggt aaaggaacgt
     5461 tatgtcatgc attggctgaa aaattagggt ttgatttttt agattctgga gccttatacc
     5521 ggattactgc attaagcgca attaaaaaag aggttcccct tgatgatgag gaaaaactag
     5581 cggaagttgg gcgtaatctt gatattcaat ttttgccaga aaatggcgag attcaggtga
     5641 ttttggaagg agaaaatgta ggcgacttaa tccgaacggc agaagcaggt caaaatgcct
     5701 ctaaagtcgc tgctttccct ttggtacgtg aagcactttt agaacgccaa agagccttta
     5761 gtagcgaaaa aggtctgatt gcagatggac gagatatggg gacagttgtg tttcctgatg
     5821 cacaaattaa gctgttttta gatgcaagtg ccgaagaacg cacaaaaaga cgtgtaaaac
     5881 agttgcaaga aaagggattt aatgctaact ttgacgagat tttagccgag ataaaagaac
     5941 gtgattttcg cgatagaaat cgatcagtcg cgccacttgt tccggctaaa gatgcgttgc
     6001 tgttagattc aacgcattta tcaattgaag atgtgattaa ccaagcatta aatcatatcg
     6061 ctcaatacat taaattttag tttgttgctt cacataggat ttgtgtagct tttattatca
     6121 accccgttta acaggacgtt agatggatgt ttatttttaa gaagatttat tatgtcagaa
     6181 ttatcgtttg ctcaactact tgaagaatca tttgcagcta caccacgttt aggtgatgtt
     6241 gttaaaggta ctgttgttgc tatccaaaaa ggcttagtta ttgttgatac aggtttcaaa
     6301 tctgaatctg caatcgatgc ctcagaattt actaacgcac aaggtgaatt agaagttcaa
     6361 gtgggtgatg aagtagatgt tgttcttaaa gctgtagaag acggttttgg tgcaacagta
     6421 gtttctcgtg gtgatgcaaa acgtaacgaa gcttggattg ctttagagaa agcatttgaa
     6481 gaacaagcta cagttatcgg tttcgtaaat ggtaaagtaa aaggcggttt cactgttgaa
     6541 ttaaacggtg ttcgtgcatt cttacctggt tcattagttg atactcgtcc ggttcgtgat
     6601 tctttaaacc tagaaggtaa agagtacgaa ttcaaagtaa tcaaattaga tcaaaaacgt
     6661 aacaacgtag tagtatctcg tcgtgctgtt atcgaaacag aaagcaacca agatcgtgat
     6721 gcggtattag caaacttagt tgaaggttct gaagttaaag gtacagttaa aaacttaact
     6781 gactacggtg cattcgtaga tttaggtggc gttgacggtt tattacatat cacagatatg
     6841 gcttggaaac gtgttaaaca cccaagtgaa gtggttaatg taggcgatga agttactgtt
     6901 aaagtattaa aatttgacaa agacaaaact cgtgtatcat taggcttaaa acaattaggt
     6961 caagatcctt gggctgtaat tgctgaaaac cacccggtaa acagcaaatt aactggtaaa
     7021 gtaactaact taactgacta cggttgcttc gttgagattt tagacggtgt tgaaggttta
     7081 gttcacgttt cagaaatgga ttggacaaac aaaaacattc acccatctaa agtggttaac
     7141 gtaggcgatg tagttgaagt aatggtactt gaagttgatg aagaacgtcg tcgtatctca
     7201 ttaggtttaa aacaatgcaa agcaaaccct tgggaacaat ttgcggcaac tcacagcaaa
     7261 aatgataaag tatcaggtaa aatcaaatca attactgact tcggtatttt catcggttta
     7321 gaaggtggta ttgacggttt agttcactta tctgacattt cttggaatgt ttcaggtgaa
     7381 gaagcagttc gtaactacaa aaaaggtgat gaagtagaag ctgttgttct acaagttgat
     7441 gcagtgaaag agcgtatctc tttaggtatc aaacaattag aatctgatcc tttcacaaac
     7501 tttgtagatg gtactaaaaa aggtgcaatc ttaacaggta aagttgtaga agttgatgct
     7561 aaaggcgtta aagttgaatt ggaaggtggc gttgaagcat ttattcgtgc aaacgaagca
     7621 actgctgagc gtgtagaaga catcacttct gttatttctg ttggcgattc aatcgaagcg
     7681 aaatacaccg gtgttgatcg taaatctcgc gtagttaact tatctgttcg tgcaaaaaac
     7741 gaagctgaag aatcagcagc aattgcacaa gtgaacaaag aggaagttgt tgtacctaat
     7801 gcatttgctg aagctttcaa agcagctaaa ggcgaataat tagtatagac taatctaaaa
     7861 tgggtatgtt ttgaacatac ccatttaaac ttagaaatgc cattttgaat acttattttc
     7921 ataataaatg attattcaaa atagaattaa tttttggtag aaataatatg actaaatctg
     7981 aattaattga gagtttagca tctaaaaatc caagtttacc aattaaaatg gtggagcatt
     8041 gtgtaaaaga gcttttagag cagttaacgg ctactttaga agaaggtgaa aggatagaag
     8101 taagaggatt tggtagtttt tctctacatt atcggcagcc gcgtttaggt cgcaatccca
     8161 aaacaggaga aagtgttctt ttaggcgcga aatatgtacc acattttaaa gctggtaaag
     8221 atctaaaaga gagagttgat ctgctttaag tcttattaat tcaataatcg tagtaaggag
     8281 attatatgat taagtatatt ttaggtattt taattgtgat tgcagttatt attgtcgctg
     8341 ttacgattgg agccaataat gatcaactta tcacctttaa ctatattttt gctcagagtg
     8401 aattacgctt atcaacgtta gttgcgattt tatttggctt aggattgatt cttggttggt
     8461 tggtaacggg tattttttac ttaaaaatta agtttcaaaa cgttgcttta aatcgtcgtg
     8521 taaagcgcca agctcagcaa ataactgaat taacgactcc aaaggctgaa taatcaatgc
     8581 ttgaattatt gttcctttta ttgcctattg cagcactata tggctggtat atgggacaac
     8641 gtagtgcaaa gaaggatcaa gaaaccgcta gtaataagtt ctctcgtgag tatgttacgg
     8701 ggttaaattt tcttttatct aatcagcagg aaaaggcggt ggaccttttc ctctctatgt
     8761 tacaaaaaca agaatccgaa aatcatattg catctgaatc ccaatttgaa gcggagttaa
     8821 ccctaggtaa tcttttccgt tcaagaggtg aggtagatcg tgccttacgt attcaccaaa
     8881 cattagtgaa tagccctcat tattcatttg atcaaaaatt attagcaaaa cagcaattag
     8941 ctaaagactt tatggttgca ggtttctatg accgtgcaga aaattattac atttcattag
     9001 ttgatgaacc tgagtttgct aaatattctt tatctcagct tgctgttatt taccaaaaaa
     9061 ccagagaatg gaaaaaagcg attaatgtta cagaaaaacg gcttcgaata gagccggatg
     9121 cagataaaat accgctttca catttttatt gtgaatatgc gcaaggggtt aaatttgatg
     9181 ataaagcggc atttattgaa tcgttaaata aagcgttaga atattatcct caatccacac
     9241 gcgcttctat aatattaggt gatttctatt tagaagaggg agaatatcta agagcattaa
     9301 gctatttcga acagattctt gtgcaagacc ctgattatat tagcgaagtg cttggacgaa
     9361 ttaagcaaag ctatatggct cttgaggact taaatggcta tgagttattt ctcattcgag
     9421 caaaccgagt aaaacataat agtagtgtag atattgcttt aactgaattt attgaagaaa
     9481 aagatggtat caatgctgca cattctaaac tataccagca gttgagtact tatccgaatt
     9541 taattacttt tcaccgcttt attcgctatc aagcagattt tgcggaggaa ggaaatggta
     9601 aggaaagctt agttttatta cataatatgg tgggaaatca gataaaacgc agcttccaat
     9661 atcgctgttt aaattgtggt tatcaaagtt atcgcttaat gtggcaatgt ccttcttgta
     9721 atcaatggga aaaaattaag ccggtacaaa gtatcgaagg tattattcaa taaagaaaga
     9781 atctgaggaa ttgaaaatga acaataaagt aattgttgcg ttagactatg aaactgaacg
     9841 tgaagcatta gaatttgtgg atttggtcga tccgtcgctt tgtcgtttaa aagtaggcaa
     9901 agaaatgttt acaaccttag gcacaaattt tgtcaaacaa ttacacgaac gtaaatttga
     9961 tgtattcctt gatttaaaat atcatgatat tccaaatacg gttgctcgag cagtacgttc
    10021 tgctgctgat cttggtgtgt ggatggttga cttgcatgct tctggtggtt tagccatgat
    10081 ggaagaggca aagaaaattt tggagcctta tggcaaagag gcaccattat taattgcagt
    10141 gacggttcta accagtatgg aagatttgga tttgcttcaa ataggtatta atgcttcgcc
    10201 gatggaacaa gttattcgtt tagcacattt agcacaacgg gctggtttag atggcgtggt
    10261 atgttctcca caagaagttg aggtattacg tacccattgt ggtcaagatt ttaaattagt
    10321 gaccccagga atccggccaa aaggaacaga ttttggggat caacgccgag tgatgacacc
    10381 caaacaagca gtagaaacag gctcagattt tttggttatt ggtcgtccta ttacccaagc
    10441 tcaagatccg cttgcggtat taaaatctat taaccaatct atcagttaat tcattgcatt
    10501 tttaatgaag gcggaaaaat ttccgccttt tttaatcaaa caagcggtta tttttgagga
    10561 aaaatttgta aatgacatta gtctattcaa cggaaacagg cagaataaag tccgaagtaa
    10621 taaaagaaga acgccctaaa ggggatggta ttgtgcgtat tcaacgtcaa acaagcggta
    10681 gaaaggggaa aggtgtttgc cttatcaccg gtcttgattt agaggataaa gccttaaatt
    10741 ctcttgcttc agagcttaaa cgtaaattgg gttgtggtgg ctcatttaaa gatggagtaa
    10801 ttgaaatcca gggcgataat cgaggattca ttaagcaaat cttagaacag aaaggtttca
    10861 aagtgaaact ggcaggtggt tgagttttaa acaattatca gctggcagtt tttaaataac
    10921 ttcattttat ttgaaacttc attcctactt ttctgcctaa aactcacgat taaggagaaa
    10981 aactaatgtg gaagaaaacg ttgattgctg tatttttagc aagccaatat gcttttgcgg
    11041 taggaaccgg gaaagaacca tcaaaaagtt atactgaaac agaattaaaa caattaaaaa
    11101 atgattggtt agcgatttat caaaaagagc tacagtatgc agaaaatttg cgtttaaaac
    11161 agagagaaaa ttttcagcaa attaattatt tggcagatgc agcgattagt cagaagaatt
    11221 tatcactttc aacggagcag ataattcagc gtttattact aaccttagcg ggttatccgt
    11281 tggagatgaa agctgaatgg aagctgctaa atgctaaaat aacgttaaaa caagccacag
    11341 aaagtgaagt taaagcattt atttcaaaat atcctgattc tttgtatcaa aggcagttac
    11401 agaacttgat gtttgagctg ctctatcgtg aacagaaatt tccggagtta ctggaatatg
    11461 ctcaaaatgt aaaacagagt agtcttgccg accaatgccg tttattttct gctcgttatg
    11521 aactggcagc aagtaaagct caaatcaatc cggaagtttc tcaagtaact gagcaaaaag
    11581 cagaaaatgc agaactgctt gctttggtgc aagagtttga tcgcttttgg cttgctacgc
    11641 cgaaattaac ttctgattgt gcgaatttag aaagttattg gcgggatcag gggcttaaaa
    11701 ccgatgaaaa aatgcgtttg aaagcggtcg aattaattaa acaaaatgca aatgcagaat
    11761 tggcgaattt ggcggcaaat gtaaataatg agaatttgaa aatctggcta tcttccgttg
    11821 aaaaggtagc gaataatccg gcagatttgc aaaattttat cgaaaatcaa ccgcttgatt
    11881 ccccatttta tgctgataat aaagcgatta ttcagcaact ctttgctaaa tatgtgcgaa
    11941 ctttatcgga aaatatggag aacccgagtt tccagcagta tcaaacgtgg gcagagaagt
    12001 atcaactttc cagcgaggaa atcaatggct ggaaaaatgc ttttatcact cgattttttg
    12061 ataacccaga accaacattc caattttggc gtgatgagca aatcaagttg ctcaagacag
    12121 acaatttaac tgaacgccgt ttacgaatgg caatttggca aaaagcagat ttaaatgagt
    12181 ggctggttct gctatctcag caggcgaaag aaaaagcaga atggcgttat tgggctgcga
    12241 aagaggagaa aaacgaagcg aagcgtaaag ttgattttga aagcttagct aaagagagag
    12301 gcttttatgc tatgttggct gctcaacaat taggcattgt ttaccaaatc ccgatgcttg
    12361 aagtgcctga attgacacaa gcacagcttg aattgtatgc aaaccaatta gctcgtattc
    12421 aagagttgcg agagctaggg cagtttgacc aggcaagaaa aatatggatt gactggataa
    12481 aaaacatcaa gccggaagca ggtgaaaata caccaactaa aatccagtta gccctgataa
    12541 aatatgccaa ggataaaaat tggtatgatt tggcggtgga aggtacaatt caaacaaaag
    12601 cctttgatta tcttgatttg cgattaccga atgcctattc ggattggttc gatttacatc
    12661 tgcaagataa aaaaatcagc aaaacgtttg ctcaggcgat tgctcgtcaa gaaagtgcgt
    12721 ggaatgctca ggctcaatcg cacgctaatg cgagagggct aatgcaactg ttaccgacaa
    12781 cagcacaaaa aaccgctaaa gataacggtt taaccttcaa agatggcaat gatctctttc
    12841 aaccgtttaa caatattatg ttaggcacaa cccatttaat ggagttaaac gaaaaatatc
    12901 cgaataatcg gattctgatt gcctctgctt ataatgcagg agcagggcgt gttgagcagt
    12961 ggctgaaacg tagtaacggg cagttagcaa tggatgaatt tattgccagt atcccgtttt
    13021 atgaaaccag aggctatgta caaaatgtgc tggcgtatga ctactattat caaatgctct
    13081 atagcgatat aaatgataaa aatggattaa aaatgttcta tcaagaggaa ttaacaagaa
    13141 aatattaaaa aatgcttgtg tttttgtgta gaaccgctat aatgcacccc atcagacgcg
    13201 gggtggagca gcttggtagc tcgtcgggct cataacccga aggtcgttgg ttcaaatccg
    13261 gcccccgcaa ccagttttaa gctcacagct ttggttaaag ttgtgagttt tgttttatat
    13321 gctgtagcaa atttgcaaaa aatttggcaa aaaagaccgc ttgttgtggt tgctacagca
    13381 aaaaacaaac cgcttaaagc cccacggttt cccgtctggg gcttttttgc ggaaattggt
    13441 acagcattaa cgtatcaaag ctggtttatc cggctttttt tatatttgga gattatgact
    13501 tggcaacttt agaacaaaaa ttagaagatt tagtgctcga ttctattgaa gcattaggct
    13561 ttgaattagt cggcattgaa tgccaacgtg caggccgttt tttaacggtg cgtttatata
    13621 ttgataaaga aggtggcgtg acgattgatg attgtagcga tgtcagccgc caagtgagtg
    13681 cgatttttga tgtggaagat ccgattgccg ataaatataa cttagaggtt tcttcaccag
    13741 ggttagatcg tccattattt accgttgccc actatgagcg ttttatcggg caagatgtag
    13801 tgattcattt acgcattccg atgttcgatc gccgtaaatg gcaaggtaaa atcaaacaag
    13861 tagaaggtga tttcatcact ttaacggtag aaaatgaaga tcgccagttc gcatttggca
    13921 atattcaaaa agcaaattta gttccggttt ttaattttta agataaaggt aaactgacaa
    13981 aatgagtaaa gagattttat tagctgcgga agcagtttca aacgaaaagc aattaccaaa
    14041 agaggcaatt tttgaagcct tagaaaccgc tttaaccatt gcaaccaaaa agagccgtga
    14101 tttagatatt gacgtgcgtg tggtggtaga tcgtaaaacc ggtgatttcc aaactttccg
    14161 tcgttgggct gtggttgaaa atgtgaataa tatgacccgt gaaatcagct tagaagcggc
    14221 acaatttgaa gatccaaacg tacaattagg cgattttatt gaagatgaag tagagtctat
    14281 cgagttcggt cgtgtggcga ttcagacttt tggtcaggta gtcaaaacca aaattcgtga
    14341 agcggagaag acgaaaatca ttgatgaatt ccgttcggat ttaggcaaaa ttattcttgc
    14401 cactgtgaaa aaagtaaccc gtgataatat tttccttgag ttacaaggta aatcagaaga
    14461 tatcaaaggc gaagcggtca ttgtgcgtga agatatgatc ccacgtgaaa acttccgccc
    14521 gggtgaccgt gtgcgtggtg tgttatacga aatcaagcct gaatcaaaag gacctcagct
    14581 tttcgttacc cgtgctaaac cggtgatgtt agaagagcta ttcaaattgg aagtgcctga
    14641 aattggcgaa ggcgtaattg agatcaaagg ttcagcccgt gatgtcggct ctcgtgcaaa
    14701 aattgccgtg aaaacccacg ataaacgtat tgacccggta ggggcttgtg tgggtatgcg
    14761 tggtgctcgt gttcaagcta tcagcaatga attaggcggc gagcgtgtgg atatcgtact
    14821 ttgggacgaa aatccggctc aatttgtgat taatgcaatg gctccggcag atgtaagctc
    14881 tattgtgatt aacgatgaaa ctcactcaat ggatattgcg gttgaagcga aaaatctggc
    14941 tcaagctatc ggtcgtaacg gtcaaaacgt gcgtttggcg acacaattaa ctggttgggc
    15001 attaaatgta atgaccgttg aagagctaac gaagaagagc gaagaagaag atggtaaagt
    15061 catcaattta ttaacttctg ctttagaaat tgatgaagaa tttgctcaag ttttaattga
    15121 agagggcttt acgtctcttg aagcgattgc ttatgtgccg gttgatactt taacggcgat
    15181 tgacggttta gaagatgaag atttagtcga agaattacaa tctcgtgcca aaaatgcgat
    15241 cacgaaaaaa gcgttagaag aagagaagtt attaaaatca gctcaaattg aagaaaaatt
    15301 attaacgctt gaaggtatgg atcgccatat cgcattcaaa ttagctgaaa aacagattac
    15361 gactcttgaa gaacttgcag agcaaggtgt tgatgattta gccgatattg aagaactttc
    15421 agaagagaaa gctggcgagc taattatggc agcacgccaa atttgttggt tcaactaagc
    15481 aaagaggata ataaaatgac agaagagaaa aaaacacttt cgcttggtgg cgctcgcaaa
    15541 gcgagtaaag tgaatacaac cacaaccagt ggtaaagtaa aagcggttga agtaaaagag
    15601 aaaaaaccga aaattgatgc aaaagcattg caagaaaaag cagcaaaaga agctgccgca
    15661 gcgaaagcta gagctgaaaa agaagcagct gaaaagttag ccaaagaaaa agccgaagct
    15721 gaagctaaag agaaagctgc aaaaaaagca gcagaatcga ccgctagtaa accgatttct
    15781 gtgccggtaa tgccaagcag caaagcaaaa gaagaaaaac cgaaagcaca acaggtacag
    15841 ccaaaacaag agaaagcggt tgatcctgaa aaagaagcta aacgcaaaga agaagctgag
    15901 ttacgccgta agcaagagga attagctcag caaaaagcgg aaatggaggc aaaacgtgct
    15961 gcagaaaatg cccgccgttt agcagaaatt gctcgtgaag aagcggaaga taacggcaac
    16021 gaagattttg atgatgagcg ttttacttct tcttatgcta gagaggctga gcgtgataat
    16081 gaccgccgta gtgagggaaa tcgtggtcgt aacggcaaag gcaatgtggc taaagcgaaa
    16141 aaaggcggac gtgaagagga taaaaacgaa cgcagtgcag atcgtcgcaa ccataaagaa
    16201 gtaaaaggca aaggtaaaca aggtaagaaa ggtgcagctt tacaacaagc ctttaccaaa
    16261 ccagctcaag ttgttaaagc tgatgtggtg attggtgaaa ctatcactgt ggctgaattg
    16321 gctaataaaa tggcagtgaa agcgactgaa atcatcaaaa tgatgatgaa aatgggtgaa
    16381 atggtgacga tcaaccaagt tatcgaccaa gaaaccgcac aattagtggc ggaagaactt
    16441 gggcataaag tgattttgcg taaagaaaat gagttagaag aagcggtttt agaagatcgt
    16501 gatactcacg cagaaaaagt aacccgtgca ccggtagtga ctattatggg ccacgttgac
    16561 cacggtaaaa cctcgttact tgactacatt cgtaaagcca aagtggcggc aggtgaagca
    16621 ggtggtatta cccagcacat tggtgcatac cacgttgaaa ccgatgacgg caagatgatc
    16681 actttcttag ataccccggg gcatgcagcc tttacctcaa tgcgtgcgcg tggtgcgaaa
    16741 gcaactgaca tcgttgttct cgtcgttgcg gctgatgacg gtgtaatgcc acaaactatt
    16801 gaagctatcc agcacgccaa agcagcgggt gcgccattag tggtagcggt gaataaaatt
    16861 gataaaccgg aagcgaaccc tgaccgtgta gaacaagagt tactacaaca cgaggttatt
    16921 tctgagaaat tcggtggcga tgtgcaattc gtgccggtat ctgcgaaaaa aggtatgggg
    16981 atcgatgatt tactagaagc cattattctg caatccgaag tgcttgaatt aaccgcagta
    17041 aaagacggta tggcaagcgg cgtggtaatc gaatcttact tagataaagg tcgtggccct
    17101 gtggcaacta tcttggttca atccggtacg ctaaacaaag gcgacattgt tctatgtggt
    17161 tttgaatacg gacgtgtgcg tgcaatgcgt gatgaaaacg gtaaagatgt tgaatcagca
    17221 ggtccgtcta ttccggtaga agtattaggc ttatcaggcg tgcctgctgc cggtgatgag
    17281 gcaaccgtcg tgcgtgatga gaagaaagcc cgagaagtgg ctctttatcg ccaaggtaaa
    17341 ttccgtgaag taaaactggc tcgtcagcaa aaagctaaac tggaaaatat gttcagtaat
    17401 atggcagccg gtgatgtggc agaattgaac atcattgtta aagcagacgt acaaggctcg
    17461 gtagaagcga tcagccaatc cttaatggaa ctttcaaccg atgaggtgaa agtgaaaatt
    17521 gttggttcag gtgtaggtgg tattaccgaa actgatgcaa ccttagccgc agcttctaat
    17581 gctattatgg tcggctttaa cgtgcgtgcc gatgcctctg cccgccgtgt gattgaaaac
    17641 gaaaatatcg atttacgtta ctactccatc atttatgagc tattaaatga cgtgaaagca
    17701 gcaatgagcg gtatgttaca gcctgaattc aaacaagaaa ttatcggctt ggcagaagtg
    17761 cgcgatgtgt tccgccaccc gaaatttggg gcgattgccg gttgtatggt gacagaaggt
    17821 atcgttaaac gtaacaaccc aatccgtgtt ctgcgtgata acgtagtaat ttttgaaggc
    17881 gagttagaat ctctccgccg tttcaaagat gacgtatctg aggtgcgtaa cggtatggaa
    17941 tgtggtatcg gcgttaaaaa ctacaacgac gtaaaagttg gcgaccaaat cgaagtgttt
    18001 gaagtggttg aagtaaaacg tactatttag cctaattttg tgtaggggcg tattgcatac
    18061 gccctttgta ttttttaggg cgtgaagcat cacgccccta taaaagagaa aaatatgtcc
    18121 agagaattta aacgtagtga ccgtgtggca caggagctac aaaaagaagt ggcggtgatt
    18181 ttacaacgtg aggtaaaaga tcctcgcatt ggtatggtga ctgtttctga tgtggaagta
    18241 tcaagagatt tggcgtatgc caaaattttt gtgactttct tatttgataa cgatgctgaa
    18301 gctattaagc aaggtatgca aggcttggag aaagcaagcc cctatattcg aaccctttta
    18361 ggtaaagcaa tgcgtttgcg tattgtgcct gaactgcgtt ttatctacga tgaatcgcta
    18421 gtcgaaggta tgcgtatgtc taaccttgtg tctagtgtaa tcaaaaatga cgaagaaaaa
    18481 cataaagagg actaattgtg tctagacctc gcaaacgtgg ccgtgatatt cacggcgttt
    18541 tcttattaga taaaccacaa ggaatgtctt caaacgatat tctgcaaaag gtaaagcgaa
    18601 ttttccaagc aaataaagcc ggacataccg gggcgttaga ccctctcgca accggaatgc
    18661 tgccgatctg tttaggtgaa gcgaccaaat tttcgcaatt tttgttggat tcggataaac
    18721 gttatctcgt caccgcaaaa ttaggcgagc gaaccgatac ttcagatgcg gaagggcaag
    18781 tggtggaaac caaagcagtt gcagtgacaa aatctcaaat tttggctgct ttggagaaat
    18841 ttagaggtga tattttgcaa gtgccgacaa tgttttcggc cttaaaacac aacggcaaac
    18901 ccttgtatga atatgcccga gcagggatta cggtggagcg tgaggctcgc ccgattacga
    18961 tttttgaact aaatttcatt gaatacaagg ctccattttt aacccttgag gtgcattgtt
    19021 ctaaaggtac ttatatccga actttggtcg atgatttagg cgaagagttg ggctgtggtg
    19081 cacacgttac gatgctacgc cgtacagcag tggcagatta tccgattgaa aaaatgatga
    19141 gctatgcaga tttgcaaaat ttagccgaaa atcaaccgct tgcagagtta gaccagcact
    19201 tattgccgat ggatacggca gtttctgcat tagcaaaaat aaatttaagt tcagagcaaa
    19261 ctaaagcggt gggttttggt cagagaatta gatttgataa tctgaaccaa ctttatggtt
    19321 tggtacgttt atattcagaa gatgaacaat ttctcggtgt ggcagaaatc accaatgata
    19381 ctgtgattcg tcctaaccga atgattaact taacggaata agaatgaaat cgataatttt
    19441 taccttacct ttagcgatta tcactttagc cttagccggt tgttcaagtg ataatcaaga
    19501 aagttatgcc ggcttaaact tagatgctaa atacagtaaa tctcgctcgg tcagtcattt
    19561 taatgattat gtgcattttc tgaaacagaa ggcagcaggg gcaggagtgt ctgcaaaaac
    19621 cttaaatgct cagaaattca ttcattacaa cgccagagcg gtgcagttag atcaacagca
    19681 agctgcacga agacgtgacc cgaatgtacc gcctccgcca ccaaatccaa gttttaaaca
    19741 aagtattaac tcaagcgaag gtggatcagg caagtgaacg ttggtatgaa tataatagcc
    19801 agcttaccca tgccagccaa aaatatgggg tacaaaaaga gtatattttg gcactttggg
    19861 gaatggagag cagctttggg cgtaaccaag gggattttga tgtactttcg gtgttggcaa
    19921 ccctcgcctt tgatggtcgc cgtgagaagt tatttacgca agaatttgtg aatgcgatga
    19981 aaatgctcga tgacggcaca attaaacgct atgaattgct tggatcttgg gcaggagcga
    20041 tgggacaaac tcaatttatg ccaacttctt acttaaccta tgcagctgat ggcaataatg
    20101 acggtaaaaa agatatttgg gagaatgaag ccgatgcatt tgcctcgatt gccaattatc
    20161 tttcaacagt aggttgggat aatcaactac cttggggtgt tgaggttaaa ttagcttcac
    20221 cgatggattt aagtttcgcc ggtcttgaaa ccaacaaagc gaaaacattg gcggaatggc
    20281 aagccttagg tatttattta gcttatccga atggacaaga atcggcaaaa ttagctcaat
    20341 tacacggcaa agaggtttgg ttgattcgtc cggataaaga agcgggaaga gcgtttttag
    20401 tttctaataa tttccgtact ttaatggatt ggaataaatc gaataacctt ggtatcagta
    20461 tcggaaaatt tgccgatcga attttagctt cagttggtca ataatcgaat aaaagcatag
    20521 tagcaaagcc tatctatgct tttattttat caaagcgtcg cctttcttct gcaaacgacg
    20581 ttgcttaaaa aaatcactga tcttttggct acattctctg cccaatacat tgccatgcac
    20641 ttctaagaaa tggttcattt tataatcttc aaacagatga tagcgtgaac ctaccgcacc
    20701 tgttttataa tcacttgccc caaaaaccaa tcgcttaatc cgactatgta aaattgcacc
    20761 ggcacacatt gggcaaggct cgagcgtaac ataaagggta caatctaaca gacggtaatt
    20821 ccctaaagtt tgtcctgctt gacgaattgc ctgcatttca gcgtgtgcag atggatcaca
    20881 gagttgaatg gtttggttcc agcctctgcc gataatctgt tggtttttat caaccagtac
    20941 tgccccaacc gggatttcgc cttttgcttc ggctaaatca gcgagatcaa gggcgtattg
    21001 cataaaggcg atgtcttgct cggagatctg aagtggacaa gaagtttgat ttggtttgat
    21061 aaacatagtt gcaaaaaatt gagttttttt gaccgcttgt aaaatgcccc acgagggtgg
    21121 ggcatcgctt acttcgctta gtgtcgttta gtcacgacga ccacgttttt cactgaaacg
    21181 tttttcttta aagccacctt tgcggtcttt attgaaaccc ccgtctcggc gaccaccacg
    21241 atcattacga tcgttaccac ggcgaccacg accttcaaat ggatttgcat tacttgcact
    21301 gtttgcagag ccaagtaatg tcatctgcat tggtttgctt aatacacgtg ctttgtgagc
    21361 gaaatgttgt acgagatgat ttggcattcc ttgcggcaac tcaatggttg agtatttatc
    21421 ataaagtttg atatgcccga tgtaacggct gctgatatcc ccctcgttgg caatcgctcc
    21481 aacaatatga cgaacttcca caccgtcttc acgccccaat tcaatgcggt ataaatccat
    21541 tgccacacca ttgttttcac ggtgttcacg accgttacga cgatcgtttc gctcattgcg
    21601 gtcacgtcca cgttcagaac gggcagcacg cacaaccgga tccggtggca gaatcagttt
    21661 ttgtttttct tgcagtaaca tcatcatcgc cgctgctaat tcttcgtggt cttgatccgc
    21721 agtaaataaa tcttccaaca attcacgata tttttctaaa tcgtgatgtt ctaactgctt
    21781 agaaatgcgg gctttgaatt tctcacggcg tttttccatt aaaatttcgt ggtttggaat
    21841 cgccacttca ttaattggtt ttttgattaa attttcgata ttgcgtaata agcggcgttc
    21901 acgaggctca acaaacagta aggcacgacc tgaacgaccg gcacgaccgg tacgtccgat
    21961 gcggtgaaca taagattctt cttctaacgg aatatcgtag ttaataacca agctgattcg
    22021 ctcaatatca ataccacggg cagcaacatc ggtggcgact aaaatatcta aacgaccgga
    22081 gcgtaattta tctaaggttt gctcacgggc ttgctgggtc atatcgccgt ttaatgccgc
    22141 agtacggtag ccgttgcgtt cacacaattc ggtaatatca atagtaccgg ttttggtgcg
    22201 ggtaaagatg atagcagcat caaattcttc tacttctagg aaacgcaata acgcatcgtt
    22261 tttacggaag ccgtttacca gccagtagct ttgttcaata tccggggctg aacgctcggt
    22321 tgccttaatt tttacctctt gcggatcttt cataaaacga cgggtaatac ggcgaatcgg
    22381 ctccggcatg gtggcagaga agagagcagt ttgatgtgtt tccggtaatt cagccattac
    22441 cgtttcaaca tcgtcaataa agcccatacg cagcatttca tcggcttcat ctaacacgat
    22501 gaattttaat tcggataaat ctaatgtgcc acggcggata tggtcaagaa tacgcccagg
    22561 tgtacccact actacttgtg agccttgttt taaagcacgt aattgaatgt cgtaacgttg
    22621 tccaccataa accgtcacta cacgaatgcc tttcatattt tttgcaaact gctcacaagc
    22681 atcggctact tgaatcgcaa gctcacgggt gggtgccatc accaacattt gcgggtggcg
    22741 ttgtgttggg tcaatttgtg ccaacagcgg cagcgagaat gcggcggttt taccgctccc
    22801 ggtttgtgcc ataccaagca catcacgacc ggctaataaa tgaggaatac attcttgttg
    22861 aatgggtgat gggtttacaa agcccatttc atttacagca tcaaggattg gttgaggtaa
    22921 gcctaaatcg gcgaaagtta aagattcagt tgtcataaaa aaccatttgt ttggaacgca
    22981 caaagcagaa aatatcgact atttttctgc acagccatta atgaaaatta tattgttgaa
    23041 atttaggaag aaatgaaata acaaagcaag tgatgcttta aaaatcccct gagtataagc
    23101 ggttaaattt acaaaatttt ttgcgaaatt aaccgcttgt attgtcctaa tctttcccta
    23161 ttctttatca acaacgggag tcgtttgagt cataccacga atttgtgata actcaaacag
    23221 ggcaaaacga tactcaacga agttaaacac ttgatttgca agagcaagac gaaagaggct
    23281 gattgcctca tctttatgat ctaatttgag ttgttgtttt gctaagtaga aatacgtttc
    23341 tgtcagtatt tctgcatatt gtgagctatt ttccttagcg tcacgttcca ttatagcacg
    23401 aacttgagct aaattgagct tccctaaaaa ataatttacg atatttgttc cccagtaatc
    23461 cgaagaaaga ttattagctc gcttttgtaa attattttta gcttctgttg gtgtaaattc
    23521 cagctcatta aaatagagcc ataatgctcg ataaggatct ttcttatctt cttcataaaa
    23581 atggagaaga tcacgctggg cttcagaata tctgccgcta taatagaaag ccaaacctcg
    23641 attgagatag gtgtagctat attcccgatc taattccaat acggcattaa acgcatcaat
    23701 cgaactgtcg taatcgcctt ccagcagcag atacagcccc atatagttat aagctgccgc
    23761 catacgttga ttgagcgaaa tggcttgagc aaaatcataa cgggctaacg accataaacc
    23821 taaactgtcg taaataacgc ctctttcaaa atagaggtct gcttgctcag agggcgttaa
    23881 tggggcttct tccaatactt ggctgagtct taccaccatt gcctcttgtt caaagcgaag
    23941 ttgaggatta agttctgcca atgctaagtt tttaattgaa accaaatcgg cataccgact
    24001 ggtacagccg cttagcatta aaacagaaat taaattcagt aataagaaac ggattcgaaa
    24061 caacttaaaa agttgtacca ttacagcata tccctcaatt aaggaaaatt aaaaactgaa
    24121 taacggacac tcaaagtccg ttattcgcct ttattattga actagaaatt attttcttgt
    24181 tctgtttcta ccacattttc agctacagtt tcttctgcat ttgcctcgtt ggtattattg
    24241 atgtctttca tcgtcagacg aatgcgtcct tgacggtcaa tttctaccac tttcacttgt
    24301 acttcttgac caacggttaa gtagtccgct acacgctcaa cacgttcgtt ggtgatttgt
    24361 gaaatgtgga ctaaaccttc tttgccacct aagatggaaa cgaatgcacc gaagtccacc
    24421 acacgggtta ctttaccgtt gtagatttgg tttacttcca cttcggcaac gatctcttca
    24481 atacgagcca ttactgcttt cgctgcattg ccgtcagttg ccgcaatttt caccgtaccg
    24541 tcatcatcaa tgtcgataga agtattggtc tcttcggtta aagcacgaat tgttgcaccg
    24601 cctttaccaa tcacatcttt gattttcttc ggatcgatct tcattgtgtg aatgcgtggg
    24661 gcatagtcag aaatatctgc acgaggtgcc ggaatggctt gttccattac acctaaaatg
    24721 tgcattcttg cacctttagc ttggtttaag gcaatacgca taatttcagg ggtgatccct
    24781 tcgattttga tgtccatttg cagcgcagtc acaccggtac gggttcccgc tactttaaag
    24841 tccatatcgc ctaagtggtc ttcatcacct aagatgtcag aaagtaccac gaatttctcg
    24901 tcttctttca cgagccccat tgcgataccg gcaaccgctg ctttgattgg cacacctgcg
    24961 tccatcaacg caagagacgc accacacaca gatgccattg aagaagaacc gttagattca
    25021 gtgatttcag acaccacacg cactacatac gggaactctt cagcggttgg catcacggct
    25081 aatacgccac gttttgctaa acgaccgtga ccgatttcac ggcgttttgg cgagccgata
    25141 cgaccggttt cgcccacaga gtatggaggg aaattgtagt ggaataagaa acggtcagat
    25201 ttttcgccgg tcaattcgtc aatgatttgg gcatcacgct ctgtgcccaa tgttgctact
    25261 gctaatgctt gggtttcgcc acgggtgaaa agagcagaac cgtgggtgcg tggtaacaca
    25321 ctggtgcaaa tatccaatgc acgcacggta tccaccgtac ggccgtcaat gcgtggttcg
    25381 cctgcaataa tacggctacg cacgatttgg ctctctaatg cggtgatgat gtcgatgata
    25441 gtcccttcag aaacagtttc atcttctgcg gtaagttgtg caatcacctc tgctttaatc
    25501 gcatcgattt gctcgtaacg aacttgtttt tctacgatac gataagcatc gccaaggcgt
    25561 gtttctgcta atgcttttac tttgttgatt aaatctgtat ttggctctgg tgcaacccaa
    25621 tcccaacgtg gtttgcccgc ttctttaaca aattctttga tgttttcgat tacaacctgt
    25681 tgttgctcgt ggccgaacac caccgccgct aacatttgct cttcggttaa gatatccgct
    25741 tcagattcca ccatcaacac ggctttgtct gtacctgaaa ccactaaatc taagcggctg
    25801 attttttgct cgctggtggt tgggtttaat acgaattgat cgttgataaa accgacacga
    25861 gccgcaccga ttggaccgtt aaacggcacg ccggataatg aaagggcagc cgatgcaccg
    25921 atcatcgcaa ccagatcagg actgatttgt gggtttaccg atactacggt cgcaatcact
    25981 tgaatttcgt taaagaaacc ttctgggaaa agtggacgca caggacggtc gatcaagcga
    26041 gcgattaagg tttcaccttc gctaggacgt ccttcacgtt tgaagaaacc gcccggaata
    26101 cgaccggctg cgtaagtacg ctcttgataa tctacggtta atgggaagaa atcttgccct
    26161 tcttttacgt cttttttcgc tactacggta acaaatacgg ttgtgtcgtc catacttgcc
    26221 attactgctg ccgttgcttg gcgtgcgata gcaccggttt ctaaggtcac ggtgtgctga
    26281 ccgtatttaa actgttttac aattggagtc attgaaattt tccttttaaa gaatttacta
    26341 ttattgtcgt tttatttctc taaattgcga ctagcaaaaa ggcttttaag taaaacattt
    26401 ttgatagccg cctctcaata acaagaaata aaacttgtct agtatagcgt gatttttata
    26461 aaaaatcgcc tattattttg atcttgcacc tcagttataa agaaattcaa aacttcagtg
    26521 taaaatgggg attagtttgt gaaaagcctt gtgaaaatag tttgattgca tcgctatttt
    26581 tttattagag gtagtttaaa actaaatctg cttcctttac cggcttcact ttcaatttcc
    26641 agtgtggaat ggtgctgttc aagagcgtgt ttgacaatag ccagacctaa accgctaccg
    26701 ccggttttgt tgctacgaga ttcgtccaca cgatagaaac gttctgtcag atgggtaata
    26761 tgatgggcat cgataccaat accgtcatct tgcacgctga aaatcgcagt attcggctct
    26821 tgattatcac gttgacaaca tatttgaatg gtaactcctt caccggcgtg ccgtattgca
    26881 ttgtaaatta aatttgatac agcgctttgg agttgctctt gatctcccca taccgttaaa
    26941 ttaggctcaa tatcaaacag tatttgctga ttttggctta aaatctcggt atttttttgt
    27001 atggcggaga ttaacgccga catctggacc tcattgtgtt cggaatcatt ggaatgctcg
    27061 attttaacca aaagtgagag ttggcgaagc aggttagtca tacgttgact ttgctctttc
    27121 atcgcattga gcgctttttg ctgtaatgcc atattatgcg gctcgttttc cagcatttcc
    27181 aaataacctt gtaatatggt aagaggtgtt cgcagttcgt ggttcatatt tgccaaaaag
    27241 gtttgtcgtg agtgcataag gcggacaaaa gaggttacat ctcgtgcgac aataagtctg
    27301 gagttactgt catatcgatt gagattcaat tcaatatagc gtttattatg agtcagcagt
    27361 accaatgggc gatggtgtcg ttgttggcgg aaatagcttt taaattcagg ataaaaaatc
    27421 acattaaaaa tgcttttatt tgattttttg tcccaataaa actcaaatag ctcttgtgca
    27481 acattattgc accaagaaat ctccccgttt tcttggcaaa taatgatcgc atcgggtaag
    27541 tattgaatat gcttatttaa ttttgataac agacgtaagg ttttgatttt atcttggcgt
    27601 aaacgttcgt gatagaatgc ggcactttga gataaatgct ccattgtcgt tacttttgac
    27661 ctgccgcttt gctcattagg tctgagtaac tgaaggagag aagattcggt gtggtgatgc
    27721 caaataagta gaaccagtaa acaaaaacta aaccagaaaa aataagcagg gaaaaacaga
    27781 ttgaatacgc cggcaacggc tgctgccagc aaaagttcca ataaaaagtg tttaagtgag
    27841 agcttaactt tcattattag tcctgaaaat ggttggaaaa acggtatccc gagccacgta
    27901 cggtttgaat ataacgctca aaaccatagg gttcaagact cttacgcaat cgccgaatat
    27961 aagagtctac cgtgcgatcc tcaacataaa tatcattacc ccaaataaaa tcaagcaact
    28021 gttcacgacg atacactttt tcagggtgag tcattaaaaa gtgaagcagt ttatattccg
    28081 tgccgcttaa tttcacttcc tgttcggcaa ccaaaacccg ttgtgcctgt tgatcaagaa
    28141 tcaatccgtc tatattgatg agattgcttg gcggatcata gcttcgccgc catactgctt
    28201 caatccgggc aagcaacacc tgtggtgaaa acggtttggt aatgtagtcg tctgcaccgg
    28261 cattcagacc ggtaatacag tcttcttcgc tactgcgggc tgttagcata atgattggaa
    28321 ttttttcggt ttcaggctgt ttttttaggt atttaattaa atggataccc gaacgccccg
    28381 gcatcatcca atccagtaaa ataagctcgg gtttttcgcc cagtttattg atagcacttt
    28441 ggtagtcttc cgcttcaatt acctgatatt gtttgctgag atagagactt agcatttcac
    28501 gaatagcacg ttcgtcttca acgatcagaa ttttgttatt cattcttcct ctccgatgcg
    28561 gtgtgacaag cggtcgattt atcgcagaaa tttgcaaatt ttttactaaa accgaccgct
    28621 tgcagattac cccattttac ctttaatgta atcttccgtc tgccggaatt ttggtttgtc
    28681 gaaaatttgt ttggtatcac cgaattcaat cagctcgcct agatacatat aagcggtata
    28741 gtcagaacag cgggctgctt gctgcatatt gtgggtaact atcgctaccg tgtagtcgtg
    28801 cttgagttcg ttgataagtt cttcgatttt catagtcgaa atcgggtcaa gtgcggagca
    28861 gggctcatcc agcagtaaca cctcgggttt cactgcaata cctcgtgcaa tacagagccg
    28921 ttgctgttgc ccgccggaga gactgtcacc attttggttt aatttatgct ttacctcatt
    28981 ccataaagcc gctttggtta atgcccactc tacacgatcg tttagctcgg atttcggcaa
    29041 tttttcaaac agacgaatac caaaagcaac attatcgtaa atggacatcg ggaatggggt
    29101 cggtttttgg aaaaccatac cgactttggc tcgaataatc gaaatatccg tatcggaggt
    29161 gagtagattc tctccatcaa gattgatttc ccccgttgca cgttgattcg ggtagagctc
    29221 aaacattcgg tttagggttc gcagtaatgt tgattttcca caaccggaag gaccgataaa
    29281 tgcggtcact ttatttttgg caatacgcat attgatattt ttcagagcgt ggaaatcgcc
    29341 ataataaaaa ttgaggttgt taatatgtaa ttttgtctct aaatccgttg gtaacatata
    29401 gagtccttat tttgttttgc tgaaatacag acgagtgatg atattaagag aaagcacaaa
    29461 cagagtaata agcattgcac ctgcccaagc caatgtattc cagtcagcga acgggctggc
    29521 tgcgtattga taaatcacca cagggaggtt tgccattggt gcattcatat ctaaagaggc
    29581 aaactggttg gataatgcgg taaacaatag cggtgcggtt tctccggaaa tacgggcaac
    29641 agcgagcaac acgccggtaa taatgccgga gcgggcggca cgataagaga tcattgtaat
    29701 taccctccat cgtgggcagc cgagagccgc agctgcttca cgcagattat taggcacaag
    29761 attgagcata ctgtcggtag ttcgaacaac aatcggaatc actaataccg ccaatgctaa
    29821 tgagcctgcc cagcctgaat agtgtttaac ctgtgcgaca taaatcgcat aaataaataa
    29881 gccgataata atagaaggag cagagagcaa cacatcattc aaaaaacggg tgaattttgc
    29941 caatttggta taacgcccgt attcgctcaa gtaagtgccg gctaaaatac cgattggtgt
    30001 tgcaatcagt gttgcggtac tgacaatcag tatagagccg acaattgcat tacgtaatcc
    30061 tcctgtttca tttggtgcag gagtcgggcg ggtaaacagt tcccaagaca gtgcagggat
    30121 acctttttgg agtaaagtaa caataatcca gaccagccaa aataagccaa ataatacagc
    30181 ggaataggca agacttaaca tcaagacatt ttttattttt cggcaataaa agcgtcggtt
    30241 ttggtaattt ttcattctcg ttttccttcc tgtttaccca ttcgtgcgat taataaacgt
    30301 gaagcggcta aaacaatcga agtaataagg aacagaatta gccctaggct catcaacgct
    30361 gatttttgta atccgccggc ttcattaaat tcattggcga tagcagaagc gatggaggtt
    30421 gaaggggaaa ataccgaatc aggtagcata aaggcattac cgatcacaaa ggtaactgcc
    30481 attgtttcgc ctaatgctcg acctaacccg agcataattg caccgattac tccggttttg
    30541 gtgtaaggta gcacgacttt ccaaataact tcccaagtgg ttgagcctaa accgtaagca
    30601 gactctttca gtaaaggcgg tacaacactg aaaacatcac gcataattga ggcaataaag
    30661 ggaataatca taatcgccaa taccaagccg gcactgaata gcccgatccc gaaaggagct
    30721 ccgctaaaaa gcataccgat aaagggaagc tgaccaaatg tatctatcaa atacggttgc
    30781 acatattctt gaaataaggg tacaaataca aacagccccc acataccgta aataatagag
    30841 ggaatagccg ctagcatttc taccgctgtg ccgacagggc gttttagcca ttgcggtgca
    30901 agttcggtta agaaagtcgc aatgccgaac gagaccggaa cggcaatgac taatgcaatg
    30961 ccggcagaaa tcaatgtgcc gataatcggc actaatgcac cgtatcggtc attcacaggg
    31021 ttccactcgt tttcccatag gaatgatacc ccgaatcggc ttaatgcttc ccaactgcca
    31081 agcaataatg aaaccagcac caccaccaac aaggcaaaaa ccagcaaagc aaagaaacgg
    31141 gttgtgtgat gaaataaccc ctctacccaa ggatggttta agcatttgtt atcaatttta
    31201 tgtttatgca tagtgacaac tcttttgcaa aatgttgtga aaaaacgacc gcttgttgtt
    31261 agttaagctc catacaagcg gtcgttttgc attagtagag cgaatttcct tgtccatctt
    31321 taacttccgt tttccattga gtttggattt tctctactac attatccggt agaggcacat
    31381 aatccagttc ggcagccgca tctttaccgt gcttaaatgc ccagtcgaag aatttaaata
    31441 cccctttagt ttgctctggt ttgtcgctat gttgatgaat caagataaaa ctggcggcgg
    31501 taatcggcca ggctttttct cccgcttcgt tggttaaaat aacgcccata ccggctgttt
    31561 ggctccaatc ggcgttagca gcggcagcag caaacgtttc acgggaaggc tgaacaaatt
    31621 taccatctgc attttgcata gaaacccaag ccagagcatt ttgtttagca taggcatatt
    31681 ctacgtaacc aatagaatac ttgagctgtt tcacataagc tgcgacacct tcatttcctt
    31741 ttccgccttg tccgaccggc catttcaccg attttccttc gccgactttc tccttccatt
    31801 cggcagagac tttagaaaga tagtttgtcc aaccgaaagt tgtgcctgaa ccgtctgagc
    31861 ggcgtacgac taaaattgtt tttgccggca gggcgatatc ttgattaagt gcgacaattg
    31921 ccggatcgtt ccattgtgta attttgccta ggaatatatc ggcaagaact ttaccggaca
    31981 gtttcagttc gcccgattta agttcaggaa tattgacaac cggtacagtt cccccaatga
    32041 tggcgggaaa ttgcaaaagt ttgtgttctg ctaatgtttc gcctttcatc gggtcatcag
    32101 aagcaccgaa atcaattgtt ttggcaataa tttgttgctg accgccaccg gaaccgatag
    32161 attggtaatt gattttatta ccggtctctt tttcatataa acctgcccat ttggcgtaga
    32221 taggataagg gaaagaagca ccggctcctg tgatggtttg agcatttgct gcgacagaaa
    32281 gtgaaaaaga aatgcctaaa acggtaagta gtttaaatcg tttggcaatc atattgttct
    32341 ccttaaagtt agcgtgagtt aatttcacgt gcttagtgta gaaaaagaat atgacaaaat
    32401 gatgacaatg gtaaaaaaat cagaaaaaac gaccgcttgt gtttcaggct agactaaaca
    32461 ggctaaatcg tagaaaatag ccctcgtttt tttaatataa atatcgataa aaaatgacca
    32521 cagaaatcaa ttatgaaggc attgaacaga tgccgattaa gcgttttacc gaagatgctt
    32581 acctcaatta ttcgatgtat gtaattatgg accgggcatt gccgtttatt ggcgatggct
    32641 tgaaaccggt gcaacgccgt attatttatg cgatgtcgga acttgggcta aacgcctcgg
    32701 caaagtataa aaaatcagcc cgtaccgtgg gggatgtatt aggtaaattc catccgcacg
    32761 gtgatagtgc ctgctataaa gcaatggtgc taatggctca accgttctct taccgctatc
    32821 cgttagtgga cggacaaggc aactgggggg ctccggacga tccgaaatcc ttcgctgcaa
    32881 tgcgttatac cgaatcgaaa ctgtctaaaa ttgcagaaat tttattgggc gagttagggc
    32941 aaggaacggt ggattatcag ccaaattttg atggctcgtt ggaagaaccg aaatatctgc
    33001 cggctcgttt accgcatatt ttgttgaatg gcacgatggg gattgcggtg ggaatggcaa
    33061 ccgatattcc accacacaat attaatgaat tggctgatgc cagtgtgatg ttgctggata
    33121 acccgaaagc aacgcttgat gatgtactaa gcgtggtaca agggccggat tacccgacag
    33181 aggctgaaat catcacacca aaagcggaaa ttgccagaat gtatgagcag gggcgtggtt
    33241 ctattaaaat gcgtgcggtg tggaaaaaag aagagggtga aattgtgatt tcagccttgc
    33301 cgcaccaagc ctctccttca aaaattattg agcaagtagc aacccaaatg cggaataaaa
    33361 aactaccgat ggtggacgat attcgtgatg aatctgacca cgagaacccg attcgcattg
    33421 tgattgtgcc acgctctaat cgcattgatt ttgatgcgtt aatggatcac ctgtttgcga
    33481 cgaccgattt ggagaaaagc taccgagtca atatgaatat gattggctta gacggcaagc
    33541 cggcagtgaa gaatttgctg actattctca atgagtggct gagttttaga cgtaccactg
    33601 tcactcgccg cctgaattac cgattagata aaattttaaa ccgcttgcat attttagacg
    33661 gtttgatgat tgcatttctc aatattgatg aagtgattga gattattcgc aatgaagatg
    33721 agccgaaagc cgagttaatg gctcgtttta atctgaccga tgtgcaagca gaggcgatcc
    33781 tgaacttacg tttacgccac ttagccaaat tggaagagca tcaattacag gcggaaaaat
    33841 ccgaactgga aaaagaacgt gatgaattgc aactgatttt aggctcggaa cgccgtttga
    33901 acagcctgat caagaaagag attcaagccg atgccaaagc atttgccagc ccacgccgct
    33961 caccattggt tgaacgagcg gagtctaaag cgattgcgga aagtgacttg actccaaccg
    34021 aagatgtgac tgtgattttg tctgaaaaag gctgggtacg ttgtgcgaaa ggacacgata
    34081 ttgatgttca agccctaagc catcgagccg gagatggtta tcttgcccac gcaaggggta
    34141 gaagtaatca gcctgtggta tttttagaca gtacagggcg agcttatgct ctcgatccaa
    34201 cttcactgcc ttcggcacgc tcgcaaggcg aaccgcttac aggcaaaatc accctaccgg
    34261 aaggtgcagt agtgcagcaa gtgctaatgg caagtccaga aactaaagtg ctaatggcat
    34321 ccgattcagg ttacggcttt atttgcacct ttgcagattt agtttctcgt aataaagccg
    34381 gcaaagcggt tatttcttta accgaaaatg caaaagtact gccgccgcaa ttattggaaa
    34441 atgatgaaaa tttatcgctt gtagcgatga gtaatgttgg cagaatgttg gttttcccgg
    34501 tgagtgaatt acctcaactt tccaaaggta aaggcaataa aatcatcaat atttccgccg
    34561 cagcggcaaa atccggtgat gaatatttag cccgtttatt agtcatcaaa ccaaccaact
    34621 cgctggtctt tgtgtccggt aaacgcaaaa tcacattaaa accgagcgat gttgataact
    34681 accgtggcga acgagcaaga aaaggctcac agctagtgag agggcttagt accaattcaa
    34741 cggtagagat tgttgagtaa agagaagaag cggttagggg gtaaatccaa caattttgcc
    34801 ccaaataacc gcttgcaatg gagttattgc ttattcaaat aagcctttgt gaagcgaacg
    34861 aaccacatcg tctgcttctg catttttcac taaggtacaa acattattgc tgcttgctcc
    34921 atagctgatt aggcgaatgt tgtaattctc aagagtgtgg aataattttt tcgccacacc
    34981 ggactgagcg tgtaagttgt tgccgataat agcgactaaa gcgaggtcgc tttctacttg
    35041 cacattgcaa tatgcgttaa gctcatcgag taattccgct gataacatat ctgcacctga
    35101 agaggctgag cccgttttat ctagggtcaa tgcaacgctg acttcggaag tggtaatcac
    35161 atcaaccgaa attttgtgtt tcgctaaaat cgcaaataca ttcgctaaga aaccttgtgc
    35221 gtgtagcatt gaaaggctgg aaagcgtgag taaaatttgg ttgcggcgta atgcaatcgc
    35281 acggaaagtc gggcgtggtt gtggatcacg ggttacccaa gtgccgcctt gttccggtgc
    35341 tttgcttgag ccaacatata cagggatatt gctacgcact gccggtaata aggttgctgg
    35401 gtgtaatact ttcgctccaa atgttgccat ttctgccgct tcgttaaatg ccattgtgtc
    35461 aatgcgttga gcgttcggta caacacgagg atcggtggta taaatccccg gtacgtctgt
    35521 ccaaatgagt acatcgttag catttaatac ttctgctaac aatgcagcag agtagtctga
    35581 accgccacgt cctaaagtag tggttttgcc ttcatcatca cgaccaataa agccctgtgt
    35641 aatcacaatt ttgcctgatg cgattaatgg cttaatcaca ttgtctgatt gttgctgggt
    35701 tttctcgtca tttggtgctg cttttccata atggctgttt gttgccacaa cgtcacgcac
    35761 atctacccat actgccgggt gtccacgttc aattaataat tgcgtgaaga ttttggtgga
    35821 catcatttcc ccatggctga ttaactcatc acttaaggca gctgaagtag caaggctggc
    35881 tgattctgct aatgtttcaa tacgttctaa taattcgtcg atttccgctt taacggcatc
    35941 ttgatgttgt aatttttcaa taatattgta ttgaatttgg cggactgctg cgatgacttc
    36001 atcacggtgt tctttttcac agccgttagc aagttccact aagtaattgg ttacgccagc
    36061 agaggcagaa agtaccacca cacgagtatt tgcatcagca attacaatat tggcagaaga
    36121 ggtcattgca tcaaaatttg caacacttgt accaccaaat ttagccacag aaagatgaga
    36181 cataataaaa atttccttaa aacaaaaata gataaatatt gtgttagggg atattcggaa
    36241 aggaaatttg agtagattat acggttttat tgttgaacca attaatcaga gcactccatt
    36301 taatatggtg aaataaccta ttaaatgaca gctgatagga ttcaacctat tcagccgatg
    36361 ttaattccag tctagtgaat tcacacctcg gcaatcactc ccatcactta attctcaaac
    36421 ggccctagtt gcctaaaatc aagttgcctg agtgttgcac ctctcccgta atggcaagcc
    36481 cattactctt tttcaacagt attgaaaagt gtgcataga
//
LOCUS       DANLTI010000008        34609 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.008, whole genome shotgun sequence.
ACCESSION   DANLTI010000008 DANLTI010000000
VERSION     DANLTI010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34609
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.008"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(91..591)
                     /gene="crr"
                     /locus_tag="PXB09_000332"
     CDS             complement(91..591)
                     /gene="crr"
                     /locus_tag="PXB09_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005702996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDL5232487.1"
                     /translation="MGLFDKLFGSKQKESQEIKIYAPLTGEIVNIEDVPDVVFSEKIV
                     GDGVAIRPSGDTIVAPVNGTIGKIFETNHAFSIESEEGVELFVHFGIDTVELKGEGFT
                     RLAQEGQTVKVGEPIIKFDLALLEGKAKSVLTPIVISNMDEISNLSKLNGQVVAGESV
                     VLTLTK"
     gene            complement(676..2397)
                     /gene="ptsI"
                     /locus_tag="PXB09_000333"
     CDS             complement(676..2397)
                     /gene="ptsI"
                     /locus_tag="PXB09_000333"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDL5232488.1"
                     /translation="MITGIAASPGAVFGKALVLKEEPIVLNTRKITESEVEAEKAKFF
                     TGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILSYLTDNLVTADV
                     AASKVIEMQASMLAEIDDEYLKERAGDIRDIGNRLVRNILNMNIVDLGDIQDEVILVA
                     YDLTPSETAQLNLDKVLGFITDVGGRTSHTSIMARSLELPAIVGTNNVTSLVKTGDFL
                     ILDAVNNEVHLNPSEEKIANFKALQEKLNAEKEELAKLKELPAQTLDGHKVDVAGNIG
                     TIRDVEGVLRNGGEAVGLYRTEFLFMDRTQLPGEEEQFQAYKEIVEAMNGQMVILRTM
                     DIGGDKELPYLDLPKEMNPFLGWRAVRIGFTRREILDTQLRAVLRASAFGNLAVMFPM
                     IISVEEIRLLKSIVAELKDQLRAEGHAFDENLKLGIMVETPSAAVNARHLAKEADFFS
                     IGTNDLTQYTLAVDRGNEIIAHLYNPLSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     VRATALLLGMGLDEFSMSGISVPHVKKLIRSINFADAKALADEALAQPTAADIERLVD
                     EFYQKLN"
     gene            complement(2519..2776)
                     /gene="ptsH"
                     /locus_tag="PXB09_000334"
     CDS             complement(2519..2776)
                     /gene="ptsH"
                     /locus_tag="PXB09_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDL5232489.1"
                     /translation="MYSKDVVITAPNGLHTRPAAEFVKAAKGFASDITVTSGGKSASA
                     KSLFKLQTLGLTQGTTITISADGEDEQKAVDFLVDLIPTLE"
     gene            3037..4611
                     /gene="thiP"
                     /locus_tag="PXB09_000335"
     CDS             3037..4611
                     /gene="thiP"
                     /locus_tag="PXB09_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HDL5232490.1"
                     /translation="MLSTLTKTTAWFIYFSIIALYVFSLWALMDYHQNDTLFVFSDIT
                     ATVAYSLLQASLSAVISLFLGSLLARSFFYLDFKGKNLLYKTISFIWALPSLVIIFAV
                     IGVFGNSGWLAKLFQQLGWNWQFNLYGLHGIILAHCLFNIPFVMKYYTGGLQLTPSSR
                     FQLAAQLNLTGWNYIQIVELPIIKTLLPYMFMTVFLVCFTSFPIVLMLGGSPKYSTLE
                     VAIYQAVTFEFDFAKALILIGVQFVVGIGLQLVMNYISTSALKKLKQQPNRVEIWKPK
                     PTGLAKLGLQAVIFLQSFAIILPLVSVIWAGLSVSKLSERLLNPTLWQATQYSLYLSL
                     IASIFVITISYLIALEARQLLYTKAKLRYSILTAITLFPLLLPIFLLSVGLFILLMNS
                     ELSSEALLLLVGICNGLTLLPFIYPMLFSAMWNSLTSHDKLAQGLGLKGLRRWWIVEK
                     NQLIRPLVTVFALAMSSSLGSFTVIAFFGNADFSSLPYLLYQQLGSYRTEDAAVTALI
                     LMLFALLPFLFSKDKL"
     gene            4608..5258
                     /gene="thiQ"
                     /locus_tag="PXB09_000336"
     CDS             4608..5258
                     /gene="thiQ"
                     /locus_tag="PXB09_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein"
                     /protein_id="HDL5232491.1"
                     /translation="MIELDLHFTYEQMNMHFQLSVKKGERIAVVGESGAGKSTLLNLI
                     AGFEKAESQQSQLWLNQKNHLDTEVAQRPVSMLFQDNNIFPHLTVEQNIGLALVPSLS
                     LNPKQKAQVKQIATQMGIETFLQRQADQLSGGQKQRVALARTLLRDKPILLLDEPFSA
                     LDPQRRAELQQIVFDICQSRNLTLLMVTHQLSESLFLFNRVITVADGEIVSDLSPL"
     gene            5565..6979
                     /locus_tag="PXB09_000337"
                     /pseudo
     CDS             5565..6979
                     /locus_tag="PXB09_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
     gene            complement(7095..7898)
                     /gene="map"
                     /locus_tag="PXB09_000338"
     CDS             complement(7095..7898)
                     /gene="map"
                     /locus_tag="PXB09_000338"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDL5232492.1"
                     /translation="MNNIPLRNEEEIQKLRVACKLASDVLVMIAPYVKEGVTTGELDK
                     ICHEYILANGATSASLGYHGFPKSVCISLNEVVCHGIPSDDKKLKKGDILNIDVTVIK
                     DGYYGDNSMMYVVGEPSVRDKRLMAVTLESLYVGIRTVKAGVRLKEIGTAIQKYVEKE
                     GFSVVREYCGHGIGTEFHCDPQVVHYATDDGGVVLKEGMVFTIEPMVNAGKKEVRLMG
                     DGWTVKTKDRSHSAQYEHQIVVTKDGCEVLTIRDEEIAEGRISRIMHNS"
     gene            complement(7984..8649)
                     /locus_tag="PXB09_000339"
     CDS             complement(7984..8649)
                     /locus_tag="PXB09_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDL5232493.1"
                     /translation="MNFTTYFSDENKRRSLILLSLFHIFIIAISNYLVQISFEVQVPL
                     TEFSFPTTWGTLTFPFIFLATDLTVRVFGADLARKIIFVVMFPALVISYVISVLFFET
                     QFQGFSALTEFNFFVFRIALASFAAYLVGQLLDVLVFNSLRQGKRWWLAPTCSTIFGT
                     LIDTFVFFAIAFYKSSDEYMAEHWFTIGSVDYAFKLFVSLLLFLPLYGVILNFIMKKL
                     DLK"
     gene            8842..9531
                     /locus_tag="PXB09_000340"
     CDS             8842..9531
                     /locus_tag="PXB09_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDL5232494.1"
                     /translation="MLQLRKANERGDGSFSWLKSYHTFSFANYYDLKHIHFSHLRVIN
                     EDFIAPNHGFGKHPHDNMEILTYMLKGRVAHEDSMGNKTEVKAGEFQIMSAGTGVFHS
                     EINPDPNETLHLYQIWIIPNQKDVTPRYNQDRFAPKEGATLILSPNAEEGSFKIYQDM
                     KLWRYQYPTAKSEQLALEPNRSYWLQVVKGNLNINGVELSTSDALGIRQEKALEINTQ
                     DDVEFLLFDLV"
     gene            complement(9599..10390)
                     /locus_tag="PXB09_000341"
     CDS             complement(9599..10390)
                     /locus_tag="PXB09_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5232495.1"
                     /translation="MNNLRIKMISPEIALAKYNELDVLEINHSKVKAKIALQGAQLLS
                     WQPKNTQQDVLWLSEIEPFQTGVAIRGGIPICHPWFGTDKKPAHGTARIQAWNLLEHT
                     SSADGIRVVLGLENQAKLEMILGEVCELYFTHLAPEPAQAALHTYFQVGDITKTEVQG
                     LATQCFDKLTNQEIEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETV
                     LWNPWHNTVSAMTETAYQNMVCVETARINTLLQQNETLGVRILVR"
     gene            10514..11518
                     /gene="fbp"
                     /locus_tag="PXB09_000342"
     CDS             10514..11518
                     /gene="fbp"
                     /locus_tag="PXB09_000342"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDL5232496.1"
                     /translation="MKTLGEFIIEKQAEYPGAKGELSGILSSIRLAAKIIHREINRAG
                     LSQDILGTAGSENVQGEAQMKLDVFANETMKKALLAREDVAGFASEEDDNFVAFDNER
                     GRNAKYILMTDPLDGSSNIEVNVSVGTIFSIYRRVSPIGTPVTQEDFLQEGRKQVAAG
                     YVTYGSSTMLVYTTGNGVNGFTYDPSLGLFILSHPDLKTPTEGKYYSINEGQYVTFPQ
                     GVKRFIKYCQETDEAIKRPYSSRYIGSLVSDFHRNLLKGGIYIYPTSTVYPKGKLRLL
                     YECNPIAFLAEQAGGMATDGINPILDIKPTELHQRVPFFVGSTSMVKQAGEFMQEFAK
                     "
     gene            11702..16213
                     /locus_tag="PXB09_000343"
     CDS             11702..16213
                     /locus_tag="PXB09_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5232497.1"
                     /translation="MINKNFPLSYLASFVAFAVSLSATASVFRDDIDLQYYRDFAENK
                     GKFTVGASNIEIKDKSGNTLDALFPNVPMPDFSAANRNLGIATLVAPQYLVSVAHNTQ
                     YNTVEFGAPGTNADAHHYTYKVVDRNDYGIVEGGQHQDYQVPRLNKLVTEVAPATVTD
                     LGNNASAYQDSSRFTHFARLGSGRQIVKNTEHKDNQISTSYQYLTGGVHLPIAVHNSD
                     YWLDFRGNALNNSPYGALTAFGTRGDSGSGVYGYDQKTKRWLLLATYTFGTPANNYYN
                     RAGIIRQDYHDKQFAEDIAGTLTNAQQNAVFEWSAQGKDSSIGNKGKNLTVSLADRSI
                     KDNSASPLGYGGTPQLQLPQDNTGKTLNIEGQDSTIVLKTDIDQGAGALNFNANATVR
                     PENDQSWVGAGIVVAKGKQVNWQVKNPQGDRLSKLGEGTLHINGKGENLGDISVGQGT
                     VILTQQAGENGKKSAFNQVGIVSGRSTVVLNSADQVDPNKIYFGFRGGRLDLNGNNIA
                     FNRIQNSDDGARIVNNHLQKAATLTINGPKPPEATDLKWGTWKENSADIYEYINPHAN
                     NRTDYFTLKGNPNQYMPTNGASNAHWTFLSSNKDAAVKQVLAQKGLEHRYNSFNGFIG
                     ETDNTQHNGRLNVVYDPKASTPPATASEVTWGKGLVAGADIYLFTNPKTKIREYFALK
                     GDPKQPVPRGGLSSEHWEFLAADRNQAINKVLARKNAPIEQEKLNSIYTFSGGLNLNG
                     DLTVKGGKVLLSGRPTPHAYDAINKQDVVYADDWQNRQFKADNMQLNQYAQLYVGRNV
                     SNLQANLSANDHAQLHLGFINEQTPSCYYSEYTGKTSCDTQAVVSNEIFATLPTTQIN
                     GDVSLAEQSQLHIGKANLIGTIQAAATTSIRLANQASWTNTGDSRTGNLVAENGSTIN
                     LNEKFVTGEIPTRFNTLIIDGNFQGNAKINYLTDIAAGKGDHLQVNGLAEGTFTLALR
                     NSGKEAEVVSPLSLLTLTHQAQADKAKVSLENGYVDLGAYRYVLANRSNGYRLYNPLK
                     DAKDRNQSIATAKAELDHAIAEADKQKQEISRLNAEAEKERQAEKNAKQAAANAQSQL
                     SQANSELTRLQQYADYYRRYYPTYYRQIQGQITVAKQKVTQASAALTTAENNAKASAA
                     QIANVEQAVETAQNIAKQVEAKLATLRITAGNSEAILNAEALKLCQENGANCEHLQAH
                     ADTDSSNIQQSDWVSQYANTALSELSAQANSALQIGQDLDRQLFAKHDKFHVWSSIEH
                     QKTEHQSDLYRPYEQQTNLTQLGIELPLANGINAGVMLSRNHANAEFDEGVNGKSNLL
                     MASLYGKWHSENGTFVSLDGSYGKAKNRIDLFGENRFNRHIMAIGANLGHNFDLAGVQ
                     VQPAVGTRYYRFSAQNYKLGEVEVRSPKAHFMAYQAGVKVSKAFDLSSWKVEPSLAAH
                     YVDASSKRLSVAVNDNTFSQRFGRYLKTEVGVGVTKGQWQLSSHLGLLKGNEIGKQHF
                     AGFKLGYSW"
     gene            complement(16268..17377)
                     /gene="mobA"
                     /locus_tag="PXB09_000344"
     CDS             complement(16268..17377)
                     /gene="mobA"
                     /locus_tag="PXB09_000344"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5232498.1"
                     /translation="MEEKISAVILAGGLARRMNGAEKGLQLLDQKPLISHLLARLSPQ
                     IEDIWLNINRSVEQYQQLYPELPYYQDSLPDFQGPLSGMLSGFEQIESDYLLFVPCDT
                     PFIPTQLLHKLHTALRINQAQIAYAHDGDRPHPTVALVHRSVAENLRAYLASGERRLL
                     WFFQTQKSVAVDFSAYKAAFRNFNCLEDLTAFNPYPIKTLAITGYSGTGKTTLLEKLI
                     PKLTACGIRVGLIKHSHHNVDIDKKGKDSYRLREAGANPTMVVCDERWALMTETKQAA
                     ETKQAVEFSQLIAKFDPETVDLVLVEGFKHETMPKIQLHRKEIEKPLPALDQWTIATA
                     TDYPLERENRLDINDVEQLADFIRQWLEASKEPAN"
     gene            17469..17738
                     /locus_tag="PXB09_000345"
     CDS             17469..17738
                     /locus_tag="PXB09_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDL5232499.1"
                     /translation="MKCKRLEELLELLGEHWRKNPDLHLIDILQQLSVEVSEPDNFHA
                     LRDEVLIYQLKMRNADKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            17782..18420
                     /locus_tag="PXB09_000346"
     CDS             17782..18420
                     /locus_tag="PXB09_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5232500.1"
                     /translation="MKKFALKTVLVALSALFAFNATAVAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELNYKIPSQIKAKLPADSKLVQYHVNFLGRQSENLTRAWAL
                     AMALGAEDKVKTALFEAAQKDAFKSMDDIRAVFIANSISAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFSDSSSTNDFIQRYIDAVVFLSKK"
     gene            18440..18892
                     /locus_tag="PXB09_000347"
     CDS             18440..18892
                     /locus_tag="PXB09_000347"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HDL5232501.1"
                     /translation="MVLQVLNSKAIQPFLYANSENKMTNLSILNLVPIREGQTAKQAV
                     DSMVKLAKHAENIGIERYWIAEHHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLP
                     NHSPYIVAEQYGTLETLYPNRVELGLGRAPGTDMRTASALRPEFAFPR"
     gene            18876..19538
                     /locus_tag="PXB09_000348"
     CDS             18876..19538
                     /locus_tag="PXB09_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5232502.1"
                     /translation="MPFPDEISELKGYFDGTNPVSAYPAQGLNVPFYILGSSPESAYL
                     AAERGLPYAFASHFAPRFMDDAIRIYRSHFKPSDVLDKPYVILGVNAIVAETDEEATQ
                     LATTQTQFFLNVVTNAQQNLQPPLESDDKVWENFVKAEIVPHFGPVAFEQNALYRQEK
                     TVVRQMTECSLIGSPQSVEQQLKALKARVEIDEIMAVNYIFDEQKQHQSYTWLKQITD
                     KV"
     gene            19540..19833
                     /locus_tag="PXB09_000349"
     CDS             19540..19833
                     /locus_tag="PXB09_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5232503.1"
                     /translation="MSKTMQQKAAEAHNMCRLKGDSMLDNADRQIAFEAVYESEELAQ
                     QAVEFFAQKAKSVETEPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR"
     gene            complement(19902..21236)
                     /gene="srmB"
                     /locus_tag="PXB09_000350"
     CDS             complement(19902..21236)
                     /gene="srmB"
                     /locus_tag="PXB09_000350"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDL5232504.1"
                     /translation="MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRD
                     LLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAK
                     FTQLSIATITGGVAYQNHGEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEA
                     DRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRR
                     ERKKIQQWYYHADNVEHKTKLLARIISEFSVERAIVFVRRREDVRELSETLRKRGIRS
                     TYLEGEMAQTQRNQAINRLKEGVVNVLVATDVAARGIDIDDIDFVLNYDLPYSADTYL
                     HRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEEVLKPRIIEGLEPRTKAPKDGEL
                     NVTSKKEKARIKKKKEAKKEAAKPKVKVRHKDTKNIGKRRKPSSESAAVKQA"
     gene            21396..21659
                     /locus_tag="PXB09_000351"
     CDS             21396..21659
                     /locus_tag="PXB09_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HDL5232505.1"
                     /translation="MFVEIYGRLSCPYCVRAKTLAEKMKQELSDFDFKFIDMIAENIS
                     KQDLEPRVGKPVATVPQIFVDNNHVGGCTDFQAFVEEKFGITV"
     gene            complement(21707..21805)
                     /locus_tag="PXB09_000352"
     CDS             complement(21707..21805)
                     /locus_tag="PXB09_000352"
                     /inference="COORDINATES: protein motif:HMM:NF028261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HDL5232506.1"
                     /translation="MSSAAIITMVVAMTIIWGGLLFAIKRLPKEEQ"
     gene            complement(21805..23313)
                     /locus_tag="PXB09_000353"
     CDS             complement(21805..23313)
                     /locus_tag="PXB09_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5232507.1"
                     /translation="MSNQSSNAPQRETFSGRGAFIMAAIGSAVGLGNIWRFPYTTYEN
                     GGGAFILPYIIALLTAGLPLLFLDYSIGHKYRGGAPLAFRRFSSKFETFGWWQVLINV
                     IIGIYYAVVLGWAASYTYFSFSGAWGDKPVDFFIGEFLKMGDITQGVSFEFVGMVTGP
                     LIAVWLIAIAVLAMGIKKGISAASNLLMPQLIVMFLVLVGYSLTLPGAAKGLDALFTP
                     NWEKLADPSVWIAAYGQIFFSLSICFGIMITYASYLKKETDLTGSGLVVGFANSGFEL
                     LAGIGVFAALGFMATAAGQEVNEVAKGGIGLAFFAFPTIINQAPMGALVGVLFFGSLT
                     FAALTSFISVIEVIISAVQDKLNSGRVKATLLVGIPMMVVSVLLFGTTTGLPMLDVMD
                     KFVNQFGIVAVAFVSLIAIVTSEKLSTLEKHLNEVSSFKVGFIWRLCIVITSGVLAFM
                     LFSEIAKVYREGYEGYPSWFVNTFGWGMAIGLVVVAYLLSKMAWKNEPKGDE"
     gene            complement(23642..24931)
                     /locus_tag="PXB09_000354"
     CDS             complement(23642..24931)
                     /locus_tag="PXB09_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDL5232508.1"
                     /translation="MDSIPLSSLFITLAILLVLSAFFSGSETGLMSLNRYKMRHLAEQ
                     GHKGAKLAEKLLARTDVLLSLILICNNLVNIAASAIATMIGMQLSGEAGVAIATGLLT
                     FVMLVFSEILPKTVAAIYPEKVGFFASFVLTPLKKLLSPIVFLMNLIIAGLMKLLRIQ
                     QKDKQGLSSEELRSVVLDAGKFIPAEHREMLVSILDMEKVTVDDIMVPRNDISGIDID
                     DDWKAIMRQLNHAPHARVIIYKGDMDNNIVGILRVREAFRLMLEKNEFTKEMLLRATD
                     EVYFIPEGTPLTTQLMNFKANKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSSAP
                     TLEQEVQQQSDGTVIIEGSANLRDLNKLFDWDLPLEEARTFNGLILEHLEKIPDEGME
                     FELYNLKVMILEVSENMVKQAKVEHLSPKIEKEQDSA"
     gene            complement(25055..25852)
                     /gene="ccsA"
                     /locus_tag="PXB09_000355"
     CDS             complement(25055..25852)
                     /gene="ccsA"
                     /locus_tag="PXB09_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDL5232509.1"
                     /translation="MLLPLLSIVAYALALLWVAPTLVNLENAATVNKKPNMMLVFGFG
                     LLATILHFSVLYNELFLIEGQNFTVTNVISLMSFIMAACVTLALLKWKTVWFPLIIVY
                     SFAICSVGVAGFVKGSFIRNVQENAGLLFHLGIALFSYALFFLALIYAFQLKWLDRKL
                     KSKTMFFCQILPPLMTVERHFFTLTLAAQAMLTLTLFSGVVYLHNFFEPEHIHKAIFS
                     FLAWLVYSIQLLGQWKLHWRGKRVLIYSISGMMLLTIGYFGSRLIVN"
     gene            26068..26592
                     /gene="yceD"
                     /locus_tag="PXB09_000356"
     CDS             26068..26592
                     /gene="yceD"
                     /locus_tag="PXB09_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDL5232510.1"
                     /translation="MQKVKLPLTIDPYKDAQRRVDYEGYISGKLLTRLGESVCNVQSD
                     AQVTLSLYVDPQRLTVIKGTAKVDVEFDCQRCGDPFTQTLDCSFVFSPVSNMDQADIL
                     PEIYEPIEVNEFGEVNLLDMIEDEFILELPLVPMHSEEHCEVSVSEQVFGELPEELVQ
                     KPNPFAVLANLKKN"
     gene            26609..26779
                     /gene="rpmF"
                     /locus_tag="PXB09_000357"
     CDS             26609..26779
                     /gene="rpmF"
                     /locus_tag="PXB09_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006231206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDL5232511.1"
                     /translation="MAVQQNKKSRSRRDMRRSHDALTTAAVSVDKTSGETHFRHHVTA
                     DGYYRGRKVINK"
     gene            26798..27820
                     /gene="plsX"
                     /locus_tag="PXB09_000358"
     CDS             26798..27820
                     /gene="plsX"
                     /locus_tag="PXB09_000358"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDL5232512.1"
                     /translation="MVDITLAVDVMGGDFGPRVTIPALEKALKQNPSLSFLLFGDEHQ
                     IAPLLQKHTLLNHPKIQIHHTEQVIEADVPFTTAIRQSKNSSMRLAIEAVKEGKAQGC
                     VSGGNTGALMGLAKLLIEPLPNIERPALTSLIPTLNGKSSVMLDLGANIEVSNHQLQQ
                     FAEMGNLFAQVMLDLVYPRLSLLNIGTEENKGTAQLQAVHQLLKNRQDLNYTGFIESD
                     KLTSYLTDVIICDGYTGNIALKALEGAAKNIISLFKKEKADSNICRNTKRYLLKAMFY
                     RYYRKLQQINPDRHNGATLLGLSKVVVKSHGGANINAFYYAIDYAVQQIQGDIPNKIL
                     EGLTQK"
     gene            complement(27917..29200)
                     /gene="hisD"
                     /locus_tag="PXB09_000359"
     CDS             complement(27917..29200)
                     /gene="hisD"
                     /locus_tag="PXB09_000359"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDL5232513.1"
                     /translation="MQTLIWNNLTETEQQQYLARPAQVVGESIKAAVNEIKANVIANG
                     DKALFELAEKFDKVKLESLVVSEQQIQQAQSRISPELKQAIQNAKANIEAFHKAQQNQ
                     EVDIETQPGVCCQVITRPINAVGLYIPGGSAPLFSTVLMLAVPAKIAGCNKIVLCSPP
                     PIADEILYTAHLCGVETIYAVGGAQAIIAMANGTQTVAKVDKIFGPGNAFVTEAKRQV
                     VQEGTAIDMPAGPSEVLVIADEFADPAFVASDLLSQAEHGADSQVILVTPSESLARAV
                     DEELEKQVAVLPRAETARKALAHSRTFIAENLQQAVEISNKYAPEHLIVQTENARSLL
                     ADLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTP
                     QGFLALAETVERMASAELLDAHRNAVSLRVAKLKG"
     gene            complement(29212..30111)
                     /gene="hisG"
                     /locus_tag="PXB09_000360"
     CDS             complement(29212..30111)
                     /gene="hisG"
                     /locus_tag="PXB09_000360"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDL5232514.1"
                     /translation="MTTQNRLRIAMQKKGRLSQECSELLKQCGVKIIWNDQRLIAYSE
                     NMPIEILRVRDDDIPGLVFDGVVDLGIIGENVLEEVELGRLSAGENVAYKKLRQLDFG
                     GCRLSLAIDRDKNYNNIKDLEDAVIATSYPNLLKRYMKEQNVPFKSILLTGSVEVAPS
                     AGIANAICDLVSSGATLEANGLKEVEVIYRSTACLIQRQEPLSAEKQALVDKLLTRIQ
                     GVQQANESKYIMLHAPKDKLAEITALLPGVENPTILPLANDQTRVAMHVVSQENLFWE
                     TMEQLKEMGASSVLVLPIEKMLA"
     misc_feature    complement(30144..30271)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            30470..31327
                     /locus_tag="PXB09_000361"
     CDS             30470..31327
                     /locus_tag="PXB09_000361"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDL5232515.1"
                     /translation="MQISLKKIYSGKVRDLYEIDEKRMLMVATDRLSAFDVILDDPIP
                     RKGEILTQISNFWFNKLAHIMPNHFTGDSVFDVLPQEEAEAIQHRAVVCKRLIPVKIE
                     SIVRGYLTGSGLKDYQQTGTICGLTLPEGLVEASKLPQPIFTPSSKAEVGDHDINISY
                     EECERQIGQELAAKVRDAALKLYTEAANYALTKGIIICDTKFEFGLDENGELTLMDEV
                     LTPDSSRFWSVETYREGTNPPSFDKQFVRDWLENSGWNKQPPAPKIPAEVIEKTVAKY
                     QEALDLLTK"
     gene            complement(31468..32949)
                     /gene="ilvC"
                     /locus_tag="PXB09_000362"
     CDS             complement(31468..32949)
                     /gene="ilvC"
                     /locus_tag="PXB09_000362"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDL5232516.1"
                     /translation="MANYFNTLNLRQKLDQLGRCRFMDRDEFADGCNFLKGKKIVIVG
                     CGAQGLNQGLNMRDSGLDIAYALRAEAIAEKRASFKRASENGFVVGTYEQLIPEADLV
                     INLTPDKQHSKVVADVMPLMKQGAAFGYSHGFNIVEEGEQIRPDLTVVMTAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGLAIAKAWASATGGDRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSIVCYDKLVSEGKDPAYAGKLIQYGWETITEALKQGGITLMMDR
                     LSNSAKLRAFELSEQIKEELAFLFEKHMDDIISGEFSSTMMADWANGDANLLKWREET
                     GKTAFENAPQADGIKISEQEYFDNGVLMVAMVKAGVELAFDTMVSAGIYEESAYYESL
                     HELPLIANTIARKRLYEMNVVISDTAEYGNYLFSHVATPILAEKIIPTLEKGDLGEPT
                     PAVEIDNVTLRDVNDAIRNHPIELIGQELRGYMTDMKRISSQG"
     gene            33171..34406
                     /locus_tag="PXB09_000363"
     CDS             33171..34406
                     /locus_tag="PXB09_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HDL5232517.1"
                     /translation="MKINRIILQSCSECGQQVRVPLTSNGNAVCPVCHNILRKSNTWS
                     LHRSAFLALAILILLPFALTFPLMSIDLLGIKINATVWDGIWKMATEGYPYTAFMVLV
                     CAVIMPIAFVLLILTIQLQRIIRQRPRYTLIFLTKIKEWVMLDVYLVALAVAAFKIRD
                     YADLQFDINLIAFVLVTLLNTLLFIKTEPKQAWERFYPEYHALPFDHPSNPTLCPTCE
                     YCFDETILDLKGRQRCPRCESNLSISDNVKIQRVWACLIAGTIMMIPANIFPISTTEL
                     AGQVSADSLMSGVLLFMEMGSYTVAAIVFIASIAVPVSKITIIFYLLLAIHYKWKHPI
                     HWQMKLLHYVHFVGRWSMLDLFVLSLMMSLLERGQILSFSVGEAAFYFGAAVFLTMFA
                     SANLDSRMLWKIHTVQKTS"
BASE COUNT        10434 a         7621 c         6651 g         9903 t
ORIGIN      
        1 tttatctata aataatcgcc atttatccga ttttacctaa aacaaaaaag ccacgatctt
       61 ccatcgtggc ttccagctaa gtaggaggta ttatttggtt aaggttaaaa ccacgctttc
      121 accggcaaca acttggccat ttaatttaga taagttgctg atttcatcca tatttgaaat
      181 cacgattggt gttaatactg atttggcttt gccttcaagt agagctaaat caaatttaat
      241 gatcggctcg cccactttta cggtttgacc ttcctgtgca aggcgagtaa agccttcgcc
      301 ttttaattca acagtatcaa taccgaagtg aacaaataat tccacgcctt cttcagattc
      361 aatcgaaaaa gcgtggttgg tttcaaaaat tttgccgata gtcccattta ctggagcaac
      421 gatagtgtct ccactcgggc gaattgccac accgtcacct acaatttttt cagagaaaac
      481 aacatcaggc acatcttcaa tatttacgat ttcacctgtt aatggcgcat agattttgat
      541 ttcttgactc tctttttgtt ttgagccgaa taatttatca aataaaccca tcttaaaatc
      601 tcccttagat attagataca aaattctcgt acattttata cgagaatttt gtatttgtat
      661 gctaaataat taaaattagt ttaatttctg ataaaactca tctactaagc gttcaatatc
      721 tgcagcagtt ggctgagcaa gcgcctcatc agctaatgct ttagcatcgg caaaattaat
      781 tgagcgaatg agttttttaa cgtgtggcac agagataccg ctcatactaa attcatctaa
      841 tcccataccg agcaacaacg cagttgcacg cacgtcaccg gctaattcac cacacatacc
      901 tgtccatttg ccttcagcgt gtgaagcatc aataacttgc ttgattaagt ttaagactga
      961 tgggcttaat gggttatata aatgagcaat aatttcatta ccacgatcta ccgcaagtgt
     1021 atattgggtt aagtcattag taccaatact aaagaagtcg gcttcttttg caagatgacg
     1081 tgcatttacc gctgctgatg gggtttccac cataatacct agttttaagt tctcatcaaa
     1141 agcgtgacct tctgcacgta attgatcttt caattccgca acgatggatt ttaataaacg
     1201 gatttcttcc accgaaataa tcatcgggaa cattaccgct aaattaccga acgcagaagc
     1261 acgtaatacc gcacgtaact gagtatctaa aatttcacgg cgggtgaaac cgatacgcac
     1321 cgcgcgccaa cctaagaatg ggttcatttc tttcggtaaa tcaaggtatg gtaactcttt
     1381 atcacctccg atatccatcg tacgcagaat gaccatttga ccattcattg cttcaacaat
     1441 ctctttgtag gcttgaaatt gctcttcttc tcccggtaat tgagtacgat ccataaacaa
     1501 aaactcagta cggtataaac caaccgcttc accaccgttg cgtaatacac cttccacatc
     1561 acggatagta ccgatattcc ctgccacatc aactttatgg ccatctaatg tttgagcagg
     1621 caactctttt aatttggcta attcttcttt ttccgcattt aatttctctt gtaatgcttt
     1681 gaaattagcg attttttctt ccgatggatt taaatgtact tcattgttca ctgcatctaa
     1741 aatcagaaaa tcaccagttt taactaggga agtaacattg ttagtaccaa caatggcagg
     1801 aagctctagg gaacgagcca taatagaagt gtgagaagta cgaccaccga catcggtaat
     1861 aaagcctaat actttatcta aatttaattg agctgtttcg gaaggggtta agtcataagc
     1921 gactaaaata acttcatctt gaatatcacc aagatctacg atattcatat ttaaaatatt
     1981 gcgtaccaag cggttaccaa tatcacgaat atcacctgca cgttctttta aatattcatc
     2041 gtcaatttcc gcaagcattg aagcctgcat ctcaatcact ttacttgctg caacatccgc
     2101 agtcacaaga ttatcagtaa ggtaactcaa aatttcttct tcaagctctt catcttctaa
     2161 gatcatcaag tggccttcga aaatcgcctc tttttcctca cctaatgtac ggcgagcttt
     2221 ttctttaatc gcggttaatt gagcagctgc tttttcgcgg cctgtaaaga attttgcttt
     2281 ttctgcctca acttcgcttt cagtaatttt gcgagtattt agtacaatcg gctcttcttt
     2341 taaaaccaat gcttttccaa atactgcacc aggggaagct gcgatacctg taatcataat
     2401 tgtgtcctta atttaagatg atgtaaaaat catctggatg ttacatagca aaacacttta
     2461 ttgtagctta ttaagctaca ataaagtgac ataaatctta aatccgagaa tagaaaaatt
     2521 attctaaagt aggaatcaaa tcaactaaga aatcaactgc tttttgctca tcttcgccgt
     2581 ccgcagaaat tgtaattgtt gtgccttgag tcaaacctaa tgtttgtaat ttgaataagc
     2641 tttttgcact tgcactttta ccacctgaag tcacagtgat atcagaagca aaacctttag
     2701 ctgcttttac aaattcagcc gctgggcgag tgtgtaaacc atttggagcg gtaataacaa
     2761 catcttttga gtacataaaa tcttcctctt aaatttgaaa gttaaaaaaa tttgttttaa
     2821 tccatttatt ttgcgcacgc aactttacta caaattcaaa ttaaaaacac gctaaaaagc
     2881 gcaaaaactc gtcgtatcac cctgctaaat agggtgtttt ttaagctaac ttaaaaatca
     2941 tttgtcgaat atcaagattc tagcacacac ttaagcggaa atgttacaat aatttcgcta
     3001 ccacttcttt cacttatatt ctaaatttgg agcaatatgc ttagcacatt aaccaaaaca
     3061 accgcatggt ttatctactt tagtattatt gctctctatg tttttagtct atgggcgtta
     3121 atggactatc accaaaatga taccttattt gttttttccg atataacggc cacggtcgct
     3181 tatagcctac ttcaagccag cctctctgcg gtaatttcac tatttttagg cagcctactg
     3241 gcaagatctt tcttttattt ggactttaaa ggaaaaaatt tactctataa aaccatttcg
     3301 tttatctggg cattaccctc actagtaatt atttttgcgg taattggcgt atttggtaac
     3361 tcaggctggc tagccaaact tttccaacaa ctcggttgga attggcaatt taatttatac
     3421 ggcttgcacg gcatcatttt ggctcactgc ctgtttaaca ttccgtttgt gatgaaatat
     3481 tataccggag ggcttcaatt gactccaagc agtcgctttc agcttgcggc tcaattaaac
     3541 ctaacaggtt ggaattatat ccaaattgtg gaactaccga taatcaaaac tttgctgcct
     3601 tatatgttta tgactgtttt tctggtctgc tttaccagtt ttccaatcgt attaatgtta
     3661 ggcggtagcc caaaatacag cacgcttgaa gttgccattt atcaagcggt cacttttgaa
     3721 tttgattttg caaaagccct catcttaatt ggggtacaat ttgtagtggg cattggctta
     3781 caattagtaa tgaattatat ctcgacttct gcactcaaaa agctaaaaca gcaacctaac
     3841 cgagtagaaa tttggaaacc aaagcctacc ggactggcta aactcggctt acaagcggtt
     3901 atttttttgc aaagttttgc aataattcta ccgcttgtca gcgtcatttg ggcaggacta
     3961 agcgtgtcaa aactcagtga gcgtttgctc aaccctactt tatggcaagc tactcagtat
     4021 tctttatact taagtttaat tgcttctata ttcgtaatca caatcagcta tttgattgca
     4081 cttgaagctc gccaattact ctatacaaaa gccaagctca gatatagcat tctcaccgca
     4141 atcaccctat tccccttact tctgccgatc tttttattat cggttggttt gtttatttta
     4201 ttaatgaata gtgaactctc aagcgaggca ttactgctac tggtcgggat atgcaacggc
     4261 ttaacattac tgccatttat ttacccaatg cttttctccg caatgtggaa tagcctcacc
     4321 tcgcacgaca aattagcaca aggacttggg ctaaaggggc ttcgccgttg gtggattgtg
     4381 gaaaaaaatc aactaattcg accgcttgtt accgtatttg cgttagcaat gtcatcgagc
     4441 ttaggcagtt tcaccgtcat tgcttttttc ggcaacgctg atttcagctc actcccttat
     4501 ttactctacc aacaacttgg tagctataga accgaagatg ctgccgttac cgcactcatt
     4561 ctgatgttat ttgcgttact accattctta ttcagcaagg ataaactatg atcgaactgg
     4621 atctccattt cacttacgaa caaatgaata tgcactttca gctttctgtc aaaaaaggcg
     4681 aacgtattgc agtggttggc gaaagtggcg caggcaaaag cacattactt aatctaattg
     4741 ccggttttga aaaggcagaa agtcagcaaa gccagctgtg gctaaatcag aaaaatcatc
     4801 ttgataccga agttgcacaa cgtcctgttt caatgctatt ccaagataac aatattttcc
     4861 cgcacttaac ggtagaacaa aacatcggct tagctttagt accaagtttg tcgctcaatc
     4921 cgaaacaaaa agcacaggtt aaacaaattg ccacacaaat ggggattgaa accttccttc
     4981 agcgtcaagc cgatcagcta tcgggcggac aaaaacagcg agtggcatta gctcgtactt
     5041 tgttgcggga taagccgatt ttattattgg acgaaccctt ctccgccctc gacccgcaac
     5101 gccgagccga attacagcaa atcgtgtttg acatttgcca aagcagaaat ctaaccctgt
     5161 taatggtaac tcaccaacta tccgaaagcc tatttctatt taatcgggtg ataacggtag
     5221 cagatgggga gattgtttct gatctctccc ctctttagca aagcagatct gctaggttct
     5281 aaatgtaggg acgccacgct ggcgtacgca acgatgtcaa ttccaacaat ctaacggtga
     5341 atgatgttcc gcacggatac tagcgttatt catttttttc agaactcgcc ccctacttta
     5401 gcaaagaggg gaactgtaac taatattacc tccctattcc gctattctct tccccaaaat
     5461 gtgatctact tcacaaattt ggaaatattt taaatcttct cttttttagc taaaccgatt
     5521 tagttaaaat gcaaccgatt attttttatg aaaggtaaat tcaaatgaac tatccaaaaa
     5581 ttgcagaaca aacgattgca aaattaggtg gcaaagaaaa cattaccaca cttgcccact
     5641 gtgcaacccg tttacgctta accattgctg atgaatccaa aattgataaa gaggcgattg
     5701 aaaatattga aggcgtgaaa ggtcaattct ctactcccgg tcaataccaa attatttttg
     5761 gatcaggcac ggtaaatgaa gtgtatgccc aaatgcaaaa acaaatgggt atggcagata
     5821 tgtccacctc tgaagtagcg gctgccggtg cagcaaatca gccattacta caacgtttgg
     5881 taaaaggctt agccgatatt ttcgtgccga tcattccggc tattgtggct ggcggtttgt
     5941 taatgggtat tcactcaatg ctaacggcag tcggtttctt ctgggaaggt gaatctgttg
     6001 ttagccgtta tccgaatatt tccgatttag ttgatttcat caacactatt gctaacgcac
     6061 catttgtatt cttacctgta ttactcggtt tctcagctac acgcaaattt ggcggtaatc
     6121 cattcttagg tgcggcactt ggtatgttat tggttcaccc ggcacttgca gacggttgga
     6181 actatgccaa aaccttaatg gaaggtaaca tcaaatactg gaatattttc ggcttagaaa
     6241 ttgaaaaagt gggttatcaa ggcacggtta ttccaactat cgtttcggct tgggtgttag
     6301 caacccttga gaaaactttc cgtaaatttg tgccaagcta tttagataac ttggtgacgc
     6361 caatgatgtc attatttatc gccggtattt tagctttcac tgtaatcgga ccattgggtc
     6421 gtgaagcagg ttcagcgatt tcagcaggct taacgtggtt atatgacagc ttaggcttta
     6481 tcggtggagc aattttcggt acattctacg ctccaatcgt gattaccggt atgcaccaaa
     6541 cctttattgc ggttgaaacc caattattag ctgaagtagc acaaaccggc ggtacattta
     6601 tcttcccgat tgcagcaatg tctaacattg cacaaggtgc agcctgttta ggtgtagctt
     6661 ttgcaatgaa agatgccaaa gtgcgtggtt tagccgtgcc gtcaggtatt tcagccctgt
     6721 taggtatcaa ccggcaatgt tcggagtaaa tttacgctac cgccaagcct ttattgcggc
     6781 gatgatcggt tcaggtttag ccagtgcatt tatcgctttc tttaatgtga aagcaattgc
     6841 cttaggtgca gccggtttct taggtattcc gtcgattaaa cctgacagcc ttgcaatgta
     6901 ttctgtcggt atggtaattt catttgtagt tgcatttacc atttcagcca tttgggtgaa
     6961 aaaagcacaa gcgaaataat caaaaataga tcacaaaaaa gggattaagt gttagcttaa
     7021 tcccttttgt ttttaaacgc cttagcttaa caatgagttt cgcaagcggt catttttcgc
     7081 taaaaatttg caaattagct gttgtgcata attcgagaaa tacgcccttc ggcaatctct
     7141 tcatcacgaa ttgtcagcac ttcacagccg tctttggtaa ctacaatttg atgctcatat
     7201 tgtgcggagt ggctgcggtc tttggttttc actgtccaac cgtcacccat taagcggact
     7261 tcttttttgc cggcattcac cattggctca atcgtaaaca ccattccttc ttttaacact
     7321 acaccgccat catcggtagc ataatgcact acttgtgggt cgcaatggaa ttcagtacca
     7381 ataccgtgtc cgcaatattc tcgtactacc gaaaagcctt ctttttccac atatttttga
     7441 atcgctgtac caatttcttt taaacgcacc cccgctttca cggtgcgaat cccgacataa
     7501 agggactcta gcgtaaccgc cattaagcgt ttatcccgca cacttggctc accgactaca
     7561 tacatcatcg agttatcgcc atagtagcca tctttgataa ccgtcacatc gatgtttaaa
     7621 atatcgcctt ttttcagctt tttgtcatca cttggaatac cgtgacaaac gacctcattt
     7681 aacgaaatgc acaccgattt tgggaagccg tgatagccca aactggctga agttgcccca
     7741 tttgccaaaa tgtattcgtg acaaatttta tctaattcac cagttgttac gccctctttc
     7801 acataagggg cgatcattac taaaacatct gaagccagtt tacaggctac tcgtagtttt
     7861 tgaatttctt cttcgtttct taatggaata ttattcatta cattgctctc tgctatatct
     7921 gccataaaaa gtaaggggat tatacctttt ttcagcacaa tccccaaacc tcagtttaga
     7981 tttctacttt aaatcaagtt tcttcataat gaaatttaat atcacaccat aaagcggtag
     8041 aaatagcagt aggctcacaa agagtttaaa cgcataatcg accgaaccaa tagtaaacca
     8101 atgctctgcc atatattcat cgctactttt ataaaaggcg atagcaaaga atacaaaagt
     8161 atcgattaaa gtaccaaaaa tggttgaaca ggttggagca agccaccaac gcttaccttg
     8221 tcttaaacta ttaaatacta gaacgtctaa taattgccca actaaataag ctgcaaagct
     8281 agccagtgca atacggaaaa caaaaaagtt gaactcagtt aatgcactaa agccttgaaa
     8341 ttgggtttca aagaataaaa cggaaatcac atagcttatg acaagtgccg gaaacatcac
     8401 aacaaaaata atttttctag caagatctgc accaaataca cgcacggtta aatcggtcgc
     8461 taagaaaata aatgggaatg ttaacgttcc ccaagttgtc ggaaagctaa attctgttag
     8521 tggtacttga acttcaaagc taatttgcac taaatagttg ctaattgcga tgataaaaat
     8581 atggaaaagt gaaagtaaaa ttagagaacg acgtttgttc tcatccgaaa aataagtagt
     8641 aaagttcata ttgtatcctt tttcgttaaa tgaaaacttg aggtaaggga actcaagggg
     8701 gcattattct atacattttc ccataaaaat caagctcata ttatttcaaa aaatgaaaca
     8761 attaatctat taaattaggg tttatctatt tttgacataa agtaaaatgg cacaacttaa
     8821 cacttacata aggaatagat aatgttacaa ctgagaaaag ccaatgaacg aggcgatggt
     8881 tcttttagct ggcttaaaag ctaccacact ttttcctttg ccaattatta cgacctaaaa
     8941 catatccatt tttcacattt acgggtaatt aacgaagatt tcattgcacc taatcacggt
     9001 tttggcaagc acccgcacga taatatggaa attttaactt atatgttaaa aggacgtgtg
     9061 gctcacgaag acagtatggg taataaaacc gaagtaaaag ctggcgaatt tcaaattatg
     9121 tctgccggaa ccggggtttt ccattcagaa attaatccag atccgaatga aaccttacac
     9181 ctttaccaga tttggattat cccaaaccaa aaagatgtga cccctcgcta caaccaagat
     9241 agatttgccc cgaaagaggg agcaaccttg attctttcgc caaacgcaga agaaggttca
     9301 tttaaaattt accaagatat gaagctgtgg cgttatcaat acccaacagc caaatcagag
     9361 caactggcat tagagccaaa ccgcagttac tggctacaag tggtgaaagg gaatctaaac
     9421 atcaatggcg ttgaactttc caccagcgat gccttaggca ttcgtcaaga gaaagcactt
     9481 gaaataaaca ctcaagatga cgtggaattt ttactgtttg atctagtgta aatacaagag
     9541 acaagcggtt aaatttgtaa aaaatattac taattcagct gcttgctctc attaaacatt
     9601 atcgcaccaa aattctcact cctagcgttt cattttgttg aagtaaggta tttatccgtg
     9661 ctgtttccac acataccata ttttgatacg ccgtttctgt catcgcacta acggtattat
     9721 gccaaggatt ccaaagtacg gtttcggtag cattaatatg ctcaacttta atggtgcgct
     9781 gatttgcaaa atcttgaata aaattcaccg cttgtgccgg ataaatacaa tccacatttt
     9841 cacttatctt gcgaggtgat ggcacttcaa tttcttgatt tgtcaattta tcaaaacatt
     9901 gtgttgctaa gccttgtact tccgttttcg taatatcacc gacctgaaaa taagtatgca
     9961 atgcagcctg tgccggctcc ggtgctaagt gagtaaaata caactcacag acttcgccta
    10021 gtatcatctc gagttttgcc tgattttcta accccaaaac aacacgaatc ccatctgctg
    10081 aggaagtatg ttccagcaaa ttccacgctt gaatacgggc tgtgccgtga gcaggctttt
    10141 tgtctgtacc aaaccaaggg tggcaaatcg gaatgccgcc acgaatcgcc acacctgttt
    10201 ggaaaggttc aatttcactt aaccataata catcttgctg agtattttta ggttgccaac
    10261 tcagtaactg cgcaccttgc aatgcaattt tagccttcac tttggagtga ttaatctcta
    10321 aaacatccaa ttcattatat tttgctaatg ctatttcagg gctgatcatt ttgattcgta
    10381 gattattcat cgtattgctc ctcatcttga aagataaaat gtgaagtgga tcacagaatt
    10441 aaagcttaaa ccgctacctc tttaaaggta atcgttataa taagggcatt ctaacatagc
    10501 gaaggagaaa aaaatgaaaa cactcggcga atttattatt gaaaaacaag cagaataccc
    10561 aggggcaaaa ggggaattaa gtgggatttt atcttctatt cgtttagccg ctaaaattat
    10621 tcatcgagaa atcaaccgtg ccggtttaag tcaagatatt ttaggtactg caggttctga
    10681 aaatgtacag ggtgaagccc aaatgaaact tgatgtattc gccaacgaaa cgatgaaaaa
    10741 agcgttactt gcacgtgaag atgttgccgg ctttgcatcg gaagaagatg ataattttgt
    10801 tgcctttgat aatgagcgtg ggagaaatgc aaaatatatt ttaatgaccg atccgcttga
    10861 tggctcctcc aatattgaag tgaatgtttc tgtgggaaca atcttctcta tttaccgccg
    10921 tgtctcccct atcggcaccc cagtaacaca agaagatttc ttgcaggaag ggcgtaaaca
    10981 agttgccgcc ggttatgtta cttatggttc ttcaaccatg ctggtttaca ccacaggcaa
    11041 tggcgtgaac ggttttacct atgatccgtc attaggctta tttattcttt cacaccctga
    11101 tctaaaaacc cctaccgaag gaaaatatta ctccatcaat gaagggcagt atgttacttt
    11161 cccacaaggt gtgaaacgct ttattaagta ttgccaagaa accgatgaag ccatcaaacg
    11221 tccatactct tcacgctata tcggctcgct ggtgtccgat ttccaccgca atttattaaa
    11281 aggcggtatt tatatttacc caacctccac cgtatatcca aaagggaaat tgcgtttact
    11341 ctatgaatgc aacccgattg cgtttcttgc cgaacaagcc ggaggaatgg cgacagatgg
    11401 tattaatccg attttagata ttaagccaac agagctacac cagcgtgtac cgttctttgt
    11461 cggttcaacc tcaatggtca aacaagcggg cgaatttatg caagaatttg caaaataatg
    11521 ctcctgctta tcactcaata aaactttcaa caaagcagct gcgtattccg tagctgcttt
    11581 tgcctatctt aagattgtaa atttgtataa aaaacaggta agacctcttg ccaaataaat
    11641 aattatctat agaatacccc acctttttac tccattaata ttagcaattt attaacattt
    11701 tatgataaat aaaaactttc cactttctta ccttgccagc tttgtggcat ttgctgttag
    11761 tttatctgca acagcctctg ttttcagaga tgatatcgat cttcaatact accgtgattt
    11821 tgcggagaat aagggtaaat tcaccgtagg tgcaagcaat attgaaatta aagataaaag
    11881 tggcaataca ttagatgcac tcttcccaaa tgtaccgatg ccagatttta gtgctgcaaa
    11941 ccgtaactta gggatagcaa ctctagttgc accgcaatat ttagtcagcg ttgcccataa
    12001 tacacaatac aatactgtgg aatttggcgc cccaggcact aatgccgatg cacaccacta
    12061 cacttacaaa gtcgttgatc gtaacgacta tggaattgtt gaaggtgggc aacatcaaga
    12121 ttatcaagtg ccacgtctca ataaattagt cactgaggtc gcacctgcaa cagtgactga
    12181 tctgggtaat aatgcttcag cctaccaaga tagtagtcgt tttactcact ttgctcgctt
    12241 aggctctggt cgtcaaatag tcaaaaatac cgagcataaa gacaaccaaa tttcaacatc
    12301 ttaccaatat ttaaccgggg gagttcattt accaatcgcg gtacataatt ccgattactg
    12361 gctagatttt agaggaaatg cattaaacaa tagcccatat ggagcattaa ctgcatttgg
    12421 tactcgtggt gatagcggtt caggtgtgta tggctacgat cagaaaacga aacgctggct
    12481 actactggct acttacacct ttggtacgcc tgcaaacaac tactacaacc gtgccggtat
    12541 tatccgtcag gattatcacg ataaacaatt tgccgaagat attgccggca cattaaccaa
    12601 tgcgcaacaa aatgccgttt ttgaatggtc tgcacagggt aaagacagta gcattggtaa
    12661 taaagggaaa aacttaacgg tttcgcttgc tgatcgttca attaaagaca atagcgcttc
    12721 tccattaggc tatggtggca cacctcagct acaacttccg caagataaca ccggaaaaac
    12781 cctaaacatt gaaggacaag atagcactat cgtattaaaa accgatattg accaaggtgc
    12841 tggcgcatta aatttcaatg ctaatgcaac agttcgccct gaaaatgatc aaagctgggt
    12901 aggagctgga attgtagtgg caaaaggtaa acaagttaat tggcaagtca aaaacccaca
    12961 aggtgaccgt ttatctaaat tgggcgaagg gacactacat attaacggta aaggcgaaaa
    13021 ccttggtgac attagtgttg gacaaggcac tgtcattttg acccaacaag cgggtgaaaa
    13081 tggcaaaaaa tctgcattta accaagttgg tattgtgagc ggccgttcaa ccgttgtatt
    13141 aaacagtgct gatcaagtcg atccaaataa gatttacttt ggcttccgtg gtggtcgttt
    13201 agatctcaac ggcaacaaca ttgcgtttaa tcgtattcaa aatagtgatg atggtgcgcg
    13261 tattgttaat aatcacctac aaaaagctgc aacactcacc attaatggcc cgaagccccc
    13321 tgaagcaacg gacttaaaat ggggaacgtg gaaagaaaac agtgctgata tttatgaata
    13381 tatcaaccca catgctaata accgtaccga ttactttacg ctcaaaggca atccaaacca
    13441 atatatgcca acgaatggcg caagtaatgc ccattggacc ttcctgtctt ctaacaagga
    13501 tgcagcagta aaacaagtac tcgcgcaaaa aggtctggag catcgctaca atagctttaa
    13561 tggttttatt ggcgaaacag ataacaccca gcataacggt cgtttgaatg tggtgtatga
    13621 tccaaaagcc tctacaccac cggcaactgc ctctgaagta acttggggta aggggctagt
    13681 agctggtgca gatatttatc tgttcaccaa tccgaaaacg aaaattcggg aatactttgc
    13741 attaaaaggt gatccaaaac aacctgttcc tcgcggtggc ttaagcagcg agcattggga
    13801 atttttagct gcagatcgca atcaagcgat caacaaagta ttagcccgta aaaacgcacc
    13861 aatagagcaa gaaaagctca atagtattta taccttctct ggtggtttga acttaaacgg
    13921 cgatctaact gtgaaaggag gtaaagtgct actttccggc agaccgaccc ctcacgctta
    13981 tgatgcgatc aataagcaag atgtagttta tgccgatgat tggcaaaatc gtcaatttaa
    14041 ggctgataat atgcagctaa accaatacgc tcagctttat gttggtcgta atgtctcaaa
    14101 cctgcaagca aacttgtcag cgaatgacca tgctcagcta catttaggct ttatcaacga
    14161 gcaaactcca agttgctact attctgagta cactggtaaa acaagctgtg atacacaagc
    14221 ggtcgtttct aatgaaattt ttgcaacact gcccacaaca caaattaatg gtgatgtcag
    14281 cttggcagaa cagagccaat tacacatcgg caaagcgaac ctgattggca ccattcaagc
    14341 agcagcaaca acgagcattc gtttagctaa ccaagcaagc tggacaaaca ctggggatag
    14401 ccgtactggc aatttagtgg cagaaaacgg ttcaaccatc aacctgaatg aaaaatttgt
    14461 aacaggcgag ataccgactc gttttaatac gttgattatt gacggtaatt tccaaggtaa
    14521 tgccaaaatc aactacttaa ccgatattgc tgctggcaaa ggcgatcacc tacaagtaaa
    14581 tggtctcgcc gaggggactt tcactcttgc attacgcaac agtggcaaag aagctgaagt
    14641 ggttagcccg ttaagtttat taaccttaac ccatcaggct caggctgata aagctaaagt
    14701 ttcactggaa aacggttatg ttgatttagg tgcatatcgt tatgtgctgg caaatcgaag
    14761 caacggctat cgcttataca atccgttaaa agatgctaaa gatcggaatc agtcgattgc
    14821 aacggcgaaa gcggaattag accatgctat tgcagaagcg gataaacaaa aacaggaaat
    14881 cagccgtttg aacgcagaag ccgagaaaga gcgccaagca gagaaaaatg ctaaacaagc
    14941 cgctgcaaac gcacaatctc agcttagcca agcaaatagc gaattaaccc gtttgcaaca
    15001 atatgctgat tactaccgcc gttactatcc aacgtattac cgccaaatcc aagggcaaat
    15061 tacggtagca aaacagaaag tcacacaagc gagtgctgca ctcactacag cagaaaacaa
    15121 tgctaaagca tccgctgcgc aaattgctaa cgtagaacaa gcggttgaaa ctgcacaaaa
    15181 tattgcaaaa caagtagaag caaaattagc taccttacgt ataactgctg gaaatagtga
    15241 agcaatttta aacgctgagg cactaaaact ttgccaagag aatggtgcaa attgtgagca
    15301 tctacaagca cacgcagaca ctgacagtag taatattcaa caaagcgact gggtaagcca
    15361 atatgccaat accgctcttt ccgagctatc ggcacaggca aattctgcgt tgcaaatcgg
    15421 gcaagactta gatcgccaac tgttcgcaaa acacgataaa ttccacgttt ggagcagtat
    15481 cgaacatcaa aaaaccgaac accaatcgga tttatatcgc ccgtatgagc aacaaaccaa
    15541 cctcactcag ttaggcatag aattaccgct tgcaaacggt atcaatgccg gtgtgatgct
    15601 atcccgcaac cacgctaatg cggaatttga tgagggagtg aacggtaaat ccaacttact
    15661 gatggcaagc ctatatggta aatggcattc ggaaaacggc actttcgtca gcctagacgg
    15721 tagctacggt aaagcgaaaa accgtatcga cctgttcggg gagaaccgct ttaaccgtca
    15781 tattatggcg attggggcaa atcttggaca taacttcgac ttagccggcg tacaagttca
    15841 gcctgctgtt ggtacacgtt actatcgctt cagcgcacaa aattacaaac tgggtgaagt
    15901 agaagtccgc agcccgaaag cacactttat ggcctaccaa gcaggtgtga aagtcagcaa
    15961 ggcctttgac ctctccagct ggaaagttga gcctagcctt gccgcacatt atgtcgatgc
    16021 cagcagcaaa cgcttgagtg tggcagtcaa tgacaatacc tttagccaac gtttcggacg
    16081 ttatctgaaa actgaagtgg gcgtgggtgt tacaaaaggt caatggcaat taagctctca
    16141 ccttggtcta ttgaaaggta acgaaatcgg caaacaacat tttgccggct tcaaactggg
    16201 atatagctgg taattgctat tagcccctaa actaagcaat cgcttacttt aggggctttt
    16261 tagtcaatta attagccggc tctttgcttg cctctagcca ctgccgaata aaatcagcaa
    16321 gctgttcaac atcattaata tccaaccgat tttcccgctc aagcggataa tcggttgcgg
    16381 tcgcgattgt ccactggtct aacgccggca acggtttttc aatttcttta cggtgtagtt
    16441 gaattttcgg cattgtttcg tgcttaaagc cttccactaa aactaaatct accgtctctg
    16501 ggtcaaattt tgcaattaat tgtgaaaatt cgaccgcttg tttagtttct gctgcctgct
    16561 tagtttccgt cattaatgcc caacgttcat cacacacgac catagtcggg tttgctcctg
    16621 cttctcgcaa gcgatagctg tcttttcctt ttttatcaat atcaacattg tggtgggaat
    16681 gcttaatcaa gccaacccga ataccgcaag cggtcaattt tgggattaat ttttccaata
    16741 aggtggtttt gcctgtgccg ctatagccag taatcgccag ggttttgatg ggatatggat
    16801 tgaaagccgt taaatcttct aaacaattaa aattgcgaaa tgcggcttta tatgccgaga
    16861 aatccactgc cacacttttt tgggtttgaa aaaaccacaa taatcggcgt tcgccggagg
    16921 ctaaatacgc tcttaaattt tccgccaccg aacgatgcac caaggcaacc gttgggtgtg
    16981 ggcggtcgcc atcgtgagca taggcaattt gagcctgatt aatgcgtaat gccgtgtgta
    17041 acttgtgcaa tagttgggtt ggaataaacg gcgtgtcaca aggcacaaac agtaaatagt
    17101 cgctctcaat ctgctcgaac ccggaaagca ttccacttag tgggccttga aaatcgggca
    17161 agctgtcttg gtaataaggt aattcagggt aaagttgttg atattgttcc accgaacgat
    17221 tgatattgag ccaaatatcc tcgatttgtg gcgaaagtcg ggctaacagg tgcgaaatca
    17281 acggtttttg atctaacagt tgcaaccctt tttccgctcc attcattcgc cgagccaaac
    17341 ctccggctaa aattaccgct gaaattttct cttccatttc cctctccaaa cctgaatttt
    17401 tttgccaaat gagggctaaa agtatattat tccgcttact attcaacaag ttttttaaga
    17461 ggcatactat gaaatgcaaa cgtttagaag agctattgga actgcttggc gaacattggc
    17521 ggaaaaaccc cgatcttcac ttaattgata ttctgcaaca gctttcggtg gaagtaagcg
    17581 agccggataa ttttcatgcc ctgcgtgacg aggttttgat ttatcagctc aaaatgcgaa
    17641 acgccgataa atttgagccg attccgggca ttaaaaaaga ttatgaagat gattttaaaa
    17701 ccgcattgct ccgagctcgt ggaattttaa acgattaagt ttgtcttatt tctcacttat
    17761 catatttttg aaggaatcat tatgaaaaaa tttgcattaa aaaccgtact ggttgctctt
    17821 tctgcccttt ttgcatttaa cgcaaccgca gttgcagcag atccaactgc cggcaaagag
    17881 tatattgagg tgcgtaaagc cccatcggct caaaaagaag tggtggaatt tttctcattc
    17941 tactgccccc actgttacga ttttgagcta aattacaaaa ttccaagcca aatcaaagcg
    18001 aaattgcctg cagacagcaa attagtgcaa tatcacgtca atttcttagg tcgccaatct
    18061 gaaaacttaa cccgtgcttg ggcattggca atggcattag gagcggaaga taaagtaaaa
    18121 accgccttgt ttgaagccgc tcaaaaagat gcgtttaaat caatggacga tattcgtgcg
    18181 gtcttcatcg ctaacagcat tagtgcagaa cagtttgaca gcggtatcaa cagctttgca
    18241 gtaaacggtt tagtcaataa acaagttcaa ttagctgaag acttccaaat tcgtggtgta
    18301 ccggcgtttt tcgtgaatgg tcaataccag cttaatctag aaggattttc cgattcaagc
    18361 tcgaccaatg attttatcca acgctatatt gacgctgtgg tcttcttgag taagaaataa
    18421 tcgtccccat attaaggaga tggttttaca agtgctgaat agtaaagcta ttcagccttt
    18481 tttatatgca aactcggaga acaaaatgac aaacttatcc attctcaacc ttgtgccgat
    18541 tcgtgaaggg caaactgcca aacaagcggt cgattctatg gtgaaattag caaaacacgc
    18601 agaaaatatc ggcattgaac gctattggat tgccgaacac cataatatga aaaatcttgc
    18661 cagttccgcc acgcaattat tgattcaaca cgccctctcc cacaccgaaa aattaagagt
    18721 cggctccggt ggcgtgatgt tacccaacca cagcccttat attgtggcag aacaatacgg
    18781 cacgcttgaa acactctacc caaaccgagt agaactgggg cttgggcgag cccccggcac
    18841 cgatatgcga accgcctctg ccttacgccc agagtttgcc tttccccgat gaaatcagcg
    18901 aattaaaagg ctactttgac ggtacaaacc ctgtttccgc ctatccggca caagggctaa
    18961 atgtgccgtt ttatattcta ggctcaagcc ctgaaagtgc ctatttagcg gctgaacgag
    19021 gcttgcctta cgccttcgct tcacactttg cccctcgctt tatggacgat gcaatccgca
    19081 tttaccgctc acattttaag ccctctgatg tgttagataa accttatgtg attttaggtg
    19141 tgaatgccat tgtggcagaa accgatgaag aagcaacaca actggcgacc acccaaaccc
    19201 agtttttctt aaatgtagtg accaatgccc aacaaaatct gcaaccaccg ctcgaatctg
    19261 acgacaaagt gtgggaaaat tttgtgaaag cagaaattgt gccgcatttc gggccggttg
    19321 cctttgagca aaatgctcta taccgacaag agaaaaccgt tgtccgccaa atgaccgaat
    19381 gctccttaat tggtagcccg caaagcgttg aacaacaact taaagcccta aaagcacgag
    19441 tggaaattga tgaaattatg gcggtaaact acattttcga tgagcaaaaa cagcatcaat
    19501 cctacacttg gttaaaacaa attacggata aggtgtaata tgagcaaaac gatgcaacaa
    19561 aaagcggctg aggcacataa tatgtgccgg ctaaaaggcg attctatgtt ggataatgca
    19621 gaccgccaaa ttgcctttga agcggtgtat gagagcgaag aactggctca acaagcggtc
    19681 gaatttttcg cacaaaaagc aaaatcggtc gaaaccgaac cttgtgaaat tcaaagcgaa
    19741 attacacaaa ttgcagaagg gtttctgatg aaaatgtgga tcactttcag ctgccaagca
    19801 gaagtgattc tgttccaaat ggcagtaagg tagatataaa caagcggtta tttttgatga
    19861 aatttttgca aaaaatcttc agaaaataac cgcttgtatc attatgcctg tttaaccgca
    19921 gccgattcac tacttggttt acgccgttta ccgatatttt tggtatcttt gtggcggact
    19981 tttacttttg gttttgccgc ttcttttttc gcctcttttt tcttcttaat gcgtgctttt
    20041 tctttcttgc tggtcacatt tagctcgcca tctttcgggg ctttggtgcg aggctctaag
    20101 ccctcgataa tgcgaggttt tagtacttct tcggtgtaac gtttaatttt gccgagtaat
    20161 ttataatcgt gagcttccac caatgaaatt gccgaacctt ttttgccagc acgagcggta
    20221 cgcccaatac ggtgcaagta agtatccgca ctataaggta aatcgtagtt cagcacgaaa
    20281 tcaatatcgt ctatatcaat gcctcgagcc gccacatcgg ttgccactaa cacattcact
    20341 acgccttctt ttaaacggtt aatagcttgg ttacgttggg tctgagccat ttcaccttcg
    20401 agataagtag aacgaattcc ccgcttacgc aaggtttcgc tgagttctcg cacatcttct
    20461 cggcggcgga caaacacaat cgctctttcc accgaaaatt cgctgataat acgagctaat
    20521 aatttggttt tatgctctac attatcggcg tggtaatacc attgctgaat ttttttacgc
    20581 tcacggcgac ttggttcggc atcgacttta atcggatcat ttaataatcg ctcggcaaaa
    20641 tcctctaata actcgccctc gagggtcgct gaaaacaacc aagtatgctt acgccaacgg
    20701 gtttctgccg caattttctc cgcatcttgc ccgaagccca tttgcaacat tctatctgct
    20761 tcatcaaaaa tcagcacttc caccgctcgg cagtcaaaat tttcctcttt aatgtattgc
    20821 attaaacgac ccggggtagc aaccacaata tcttgatttt tattaaagac ttcaccgtga
    20881 ttttgatacg ccaccccacc ggtaatagtc gcaatgctca actgagtaaa tttagccagt
    20941 gcttgggctt gctccgccac ctgcattgcc agctctcggg ttggggtaag aattaaaatg
    21001 cgaggagccc ctggtttgcg gcgaggataa tctaataaat gctgaattgc cggcagtaaa
    21061 aaagcggcgg ttttgccggt accggtaggg gctgaaccga gcagatcacg tccttctaac
    21121 gcagccggaa tcgtggcttg ttgaatagcg gttgggcggt tatagccttt gtgtgctaag
    21181 gctttaagta attgagggct taaatcaagc tcctcaaacg tcattaattg ggtcatctct
    21241 gtttctctac ttgtaaattt gccccagtat atcacattaa ctgcttgccg tgatggtgaa
    21301 gaaatttatc ctaaaaggtt gaaaaaattg ttacacttac acagagccgt ttaacggaca
    21361 attcgctcac ttttacttta tagaaggaac attatatgtt tgttgaaatt tatggacgtt
    21421 tatcttgccc atactgcgtg cgtgcaaaaa cattagccga gaaaatgaaa caagaattaa
    21481 gcgattttga ttttaaattt attgatatga tcgctgaaaa tatttcaaaa caagacctag
    21541 agcctcgtgt tggcaagccg gttgcaactg taccacaaat ttttgtggat aataaccacg
    21601 ttggcggttg caccgatttc caagcctttg tggaagagaa atttgggatt accgtatagc
    21661 caaaagcccg ctaacaagcg ggctttttta tacaaaaatt tgcaaattat tgttcttctt
    21721 tcggcagacg tttaatcgca aaaagtaaac cgccccagat aatcgtcatt gccaccacca
    21781 tggtaataat tgctgctgaa ctcattactc atctcctttt ggttcatttt tccacgccat
    21841 ttttgatagc aaataagcca ccaccactaa gccgattgcc attccccagc cgaaggtgtt
    21901 tacaaaccag cttgggtagc cttcataacc ttcacgatac actttggcga tttcgctgaa
    21961 taacataaat gccagtacgc cggaggtaat aacgatacat aaacgccaga taaagccgac
    22021 tttgaatgaa gaaacttcgt tcaggtgttt ttcaagggtg cttaatttct cgctggtgac
    22081 aatcgcaatc aaggaaacaa acgccaccgc aacaataccg aattggttta cgaatttatc
    22141 catcacatca agcattggta aaccggtggt tgtaccgaat agcaagacag ataccaccat
    22201 catcggaatg ccgactagta gcgtggcttt cacacgacct gaattgagtt tgtcttgcac
    22261 cgctgaaata atcacttcaa ttaccgagat aaatgaggtt aatgccgcaa aggtgagtga
    22321 accaaagaac agcacgccaa ctaatgcccc cattggtgct tggttaataa tggttgggaa
    22381 agcgaagaat gccaagccga taccgccttt tgctacctcg ttcacttctt gccctgcagc
    22441 cgttgccata aagccgagtg ccgcaaatac gccaataccc gctaataatt caaaaccact
    22501 gttcgcaaaa cccaccacta agcctgaacc ggttaaatcg gtttcttttt tcaggtatga
    22561 agcataggta atcataatcc cgaagcagat agagagtgag aagaagattt gaccgtaagc
    22621 ggcaatccac acacttggat cagccaattt ttcccagttt ggggtaaata acgcatctaa
    22681 gcctttcgca gcacccggta gggttaatga atagccgacc aacactaaga acatcacgat
    22741 caactgcggc attagcaggt ttgaggcagc agaaatccct tttttgatcc ccatagccaa
    22801 cacagcaata gcaatcagcc ataccgcaat taacggccct gtaaccatac cgacaaattc
    22861 aaagctcacg ccttgagtaa tatcgcccat ttttaagaat tcaccgataa agaaatccac
    22921 cggtttatcg ccccacgctc cgctgaatga gaagtaggtg taacttgctg cccagccgag
    22981 taccaccgca taataaatcc cgatgatcac gttgatcagc acttgccacc aaccgaaggt
    23041 ttcaaatttc gagctgaaac ggcggaaagc gagcggtgca ccaccacgat atttatgccc
    23101 gatagaataa tctaagaaca gcagcggtaa acctgcggtc aaaagggcaa tgatatacgg
    23161 cagaataaaa gccccaccgc cgttttcata agtagtataa gggaaacgcc agatgttccc
    23221 taagccgaca gcggaaccaa tagccgccat aataaatgca ccacgtccgg agaacgtttc
    23281 tctttgcggt gcgtttgatg attgattaga cacggtaaat acctcaaact gataaagttt
    23341 tatataaaaa agaattgagt taaatgtaaa ttaatcacac tttaagtgcg gaatatgccc
    23401 aatttcaggt tgaatgtaaa gtagaaaaat atagaaaaac agataaaaaa cgctcaattt
    23461 tcaatataaa actccaaata aaaacaaaaa ttcaaacaaa aaaactaaaa acaagacatc
    23521 ttcagttaaa tataaataaa aacctaaaag ctaccagcat aattatttat attaaaatta
    23581 acaaaaaaat aacacattat ttgtacaaat aatgtgttat ttactttctt ttttcttaaa
    23641 attaggctga atcttgctct ttttcaattt tcggtgaaag atgttcaact ttcgcttgtt
    23701 taaccatatt ttcactcact tcaagaatca tcactttcaa gttgtagagt tcaaattcca
    23761 ttccttcatc aggaattttt tctaaatgct ctaaaatcaa gccgttaaag gttctggctt
    23821 cctcaagcgg taaatcccaa tcaaatagtt tgttcagatc acgcaggttg gctgagcctt
    23881 caataatcac cgtaccatct gattgttgct gaacttcttg ctcaagggtc ggtgctgatg
    23941 aagtcgtaaa ttcacccaca atttcttcta aaatatcttc aagagtgact agccctttaa
    24001 tatcaccata ctcatcaacc actaaaccaa tacgctcttt attcgcttta aagttcatta
    24061 attgtgtagt gagtggtgtg ccttcaggaa taaaatagac ttcatctgtt gcacgcagta
    24121 gcatttcttt ggtaaattcg tttttctcca acattaaacg aaaggcttca cgcacccgca
    24181 aaatcccaac aatattgttg tccatatccc ctttgtagat aatcacccga gcgtgagggg
    24241 cgtgattaag ctgacgcata atcgctttcc agtcatcatc aatatcaatg ccgctgatgt
    24301 cgttgcgagg caccataatg tcatcaaccg tcactttttc catatctaaa atagagacca
    24361 acatttcacg gtgttcggca ggaataaatt taccggcatc aagcactaca ctacgcagct
    24421 cttcggagct taagccttgt ttatcttttt gttgaatccg caataatttc atcagcccgg
    24481 caataatcaa attcattaaa aatacaatcg ggctgagtaa ttttttaagc ggtgttagca
    24541 caaagctggc gaaaaaaccg actttttcag ggtaaattgc cgctactgtt ttaggtagga
    24601 tttccgaaaa aaccaacatt acaaaagtta gcaaaccggt tgcaattgcc acaccggctt
    24661 caccggataa ctgcataccg atcatcgttg caatcgcaga ggcggcaatg ttgactaagt
    24721 tattacaaat taagataagg ctaagtagca catcggtgcg tgccaagagt ttttccgcca
    24781 gtttcgcccc tttatgccct tgctcggcaa ggtgacgcat tttgtagcgg tttaaagaca
    24841 tcaagccggt ttccgagcct gaaaaaaatg cagagagtac taaaagaata gctaaggtaa
    24901 taaataaact actcagggga atactgtcca aaattcaatt cctatgtaaa ttaatcataa
    24961 aaggtagcgt aacactaaaa gcgttgtcac tacctcactt tgtcggttca gccgacttgc
    25021 aaaaaatttt gcttttttga ccgcttgtag atcattaatt gacgatcaaa cgactaccga
    25081 aatagccgat ggtgagcaac atcatacccg aaatcgaata aataagcacc cgttttccac
    25141 gccaatgtaa tttccactgt ccaagtaact gaatgctata aacaagccaa gctaaaaagg
    25201 agaaaattgc tttatgaata tgctccggct cgaaaaagtt atgcaaataa accacaccgg
    25261 aaaataaagt gagcgtcagc atagcttgtg cagctaaggt taaagtaaag aaatggcgtt
    25321 caaccgtcat tagcggtggt agaatctggc aaaagaacat tgttttgctc tttagttttc
    25381 tatccagcca tttgagttga aaagcataaa ttaatgctaa aaagaagaga gcataagaaa
    25441 ataatgcaat ccctaaatgg aaaagcagtc ccgcattttc ttgcacatta cggataaaac
    25501 taccttttac aaatccagcc acccccacac tacaaatggc gaaagagtac acaataatta
    25561 aaggaaacca aaccgttttc cattttaaca acgcaagtgt gacacaagcc gccataatga
    25621 aactcatcaa agagattaca tttgttaccg taaaattctg cccttcgatt aaaaataatt
    25681 cattatataa cacagaaaaa tgcaaaatcg tggcaagtaa cccaaaccca aagactaaca
    25741 tcatattagg ctttttatta actgttgcgg cattttctaa attcactaga gtaggggcaa
    25801 cccaaagtag cgctagagcg taagcaacaa tggataaaag aggaagtaac atattgtctc
    25861 gaatctcgtc aaataagaat aactatcaga attttaatca aaagtaaccg ttttagctag
    25921 tttttgctgt tgctagatca aaaattatcc taaaaaatgt gcttttcgcc ttaaattgaa
    25981 ccctaccttt tctcggtaag attatctcac tgaaaacaat aattttcctt tgactaattt
    26041 gctttctatc tgtaatatgc acaccctatg caaaaggtaa aactacccct tacgattgac
    26101 ccttacaaag atgctcagcg tcgcgttgat tatgaaggct acatttcagg taaacttcta
    26161 acacgcttgg gtgaatcagt atgtaatgtg caaagtgatg cacaagtcac tctctcgtta
    26221 tatgtcgatc cacaacgcct aactgtgatt aaaggcacag caaaagtaga tgtggaattt
    26281 gattgccaac gatgtggtga cccgtttaca caaacgctcg actgttcatt tgttttcagt
    26341 ccggtgtcta acatggatca ggcggacatc ttgcccgaaa tttatgaacc tatcgaagta
    26401 aacgagttcg gtgaagtaaa tttactagat atgattgaag atgaatttat tcttgaatta
    26461 cctctagtcc cgatgcatag tgaagaacac tgtgaagtgt ccgtaagtga acaggtattt
    26521 ggcgagttgc cggaagaact ggtacaaaaa ccaaacccgt tcgcagtatt agctaattta
    26581 aagaaaaact agatctagga gaaagcccgt ggctgttcaa caaaataaga aatctcgttc
    26641 acgtcgtgat atgcgtcgtt cacacgatgc attaacaact gcagcagttt cagtagataa
    26701 aaccagtggt gaaactcact ttcgccacca cgtaactgca gacggttact accgtggtcg
    26761 taaagtaatc aacaagtaat tcctttcgag gtttatcttg gttgatatca ctcttgcagt
    26821 agatgtgatg ggcggggact ttggtccccg cgttactatt cctgcactgg aaaaagcctt
    26881 aaaacaaaat ccaagccttt cttttttatt atttggtgat gaacaccaaa tagccccttt
    26941 attacaaaaa cacacactac tcaaccaccc caaaatccaa attcatcata ccgaacaagt
    27001 gattgaagct gatgttccgt tcactactgc aatccgccaa agcaaaaaca gctctatgcg
    27061 gttagcgatt gaggcagtaa aagagggcaa agcacaaggt tgtgttagtg gcggtaacac
    27121 tggtgcgtta atgggattgg caaaattatt gattgaacca ttaccaaata ttgaacgccc
    27181 tgcactcact tcgctaattc ctaccctcaa cggcaaatcc agcgtaatgt tagatttagg
    27241 ggcaaatatt gaagtaagca atcaccagct acaacaattt gcagaaatgg gaaacctgtt
    27301 tgctcaagta atgcttgatt tagtttaccc tcgcctgtct ttattgaata ttggtacaga
    27361 agaaaataaa ggcacggcac aacttcaggc agtgcatcaa ctgctgaaaa acagacaaga
    27421 cttaaattac accggcttta ttgaaagcga taaattaacc agctatctca ctgatgtgat
    27481 tatttgtgac ggctacaccg gcaatatcgc gttaaaagcg ttggaagggg cagctaaaaa
    27541 tattatttct ctctttaaaa aagagaaagc cgattccaat atttgccgta acaccaaacg
    27601 atatttactg aaagcgatgt tctaccgtta ctaccgcaaa ttgcaacaaa ttaaccctga
    27661 ccgccataac ggtgcgacct tgctcggctt atctaaagta gtcgtgaaaa gccacggcgg
    27721 ggcaaatatc aatgcctttt attacgctat tgattatgcg gtgcaacaaa ttcaaggcga
    27781 cattccaaat aaaatcctag agggtttaac ccaaaaataa gcgaactcaa ctgttcgctt
    27841 attttcattt cttgtttcac ttaaagatac aagcggtcaa atttgcaaaa aaatttaccc
    27901 attcaaccgc ttgtgtttag ccttttaatt ttgccactcg taaactaacc gcattgcggt
    27961 gtgcatctag caattctgca cttgccattc gttccaccgt ttcggccaag gctagaaagc
    28021 cttgtggtgt cagctcctgc accgtcattc gcttgctaaa atcagctaaa cctaagctcg
    28081 aataggtttt agtgtagccg taagtcggta aaacgtggtt agtgccgcta gcataatccc
    28141 ccatactttc cggcgaatac gcccctaaga aaatcgagcc ggcattatct aaatccgcca
    28201 acaacgagcg agcattttca gtttgcacaa ttaaatgctc gggtgcatat ttattactaa
    28261 tttcgaccgc ttgttgcagg ttttccgcaa taaaagtgcg actgtgagcc aatgctttac
    28321 gggcagtttc ggcacgaggt aaaaccgcca cctgcttttc taattcttca tcgactgccc
    28381 ttgccaagct ctcacttggt gtgactaaaa tcacttggga atcggctcca tgttctgctt
    28441 gagagagtaa atcgctcgcc acaaatgcag ggtcagcaaa ctcatcggca atcaccaaca
    28501 cttccgacgg gcctgccggc atatcaatcg ccgtgccttc ttgcacaact tggcgtttcg
    28561 cctccgtcac aaacgcattg cccgggccga aaattttatc cactttcgct accgtttgtg
    28621 tgccatttgc catcgcaata atcgcttgag cccccccaac tgcgtaaatc gtttccaccc
    28681 cacacaaatg ggcggtgtag agaatttcat cggcaatcgg cggtggtgag caaagcacaa
    28741 tcttgttaca accggcaatt tttgccggca ctgcaagcat taacacggta gagaaaagcg
    28801 gggctgaacc gcccggaata taaagcccca ccgcattaat cgggcgagtg atgacttggc
    28861 aacacacccc cggctgggtt tcaatatcca cctcttgatt ttgctgtgcc ttgtggaaag
    28921 cctcgatatt cgctttcgca ttttgaatcg cttgcttaag ctctggtgaa atacggctct
    28981 gtgcttgctg aatctgctgt tctgatacaa ctaagctctc taattttact ttatcgaact
    29041 tttcagctaa ttcaaataat gccttatcgc cgttggcaat tacattcgct ttaatttcat
    29101 taactgccgc tttaatactc tcgccaacca cctgtgccgg acgggcaaga tattgctgct
    29161 gctcagtttc tgttaaattg ttccaaatta gggtttgcat atttattcct tttacgccaa
    29221 cattttctca atcggtaaaa ccaatacgga acttgcgccc atttctttta gctgctccat
    29281 tgtttcccag aacaggtttt cttggctgac aacgtgcatt gccacacggg tttggtcgtt
    29341 agctaacggt aaaatagtcg ggttttccac accgggtaat aaagcggtaa tttccgccag
    29401 tttgtctttg ggggcgtgca gcataatata cttagattcg ttcgcctgtt gcacaccttg
    29461 aatgcgggtt aataatttat ccactaacgc ttgtttttcc gctgaaagtg gttcttggcg
    29521 ttgaattagg caagcagttg aacggtaaat cacttcaacc tcttttaatc cgttcgcctc
    29581 taatgttgca cctgaagaaa ccaagtcaca aatcgcattc gcaattccgg cacttggagc
    29641 aacttcaacc gaaccggtga gtaaaatact tttaaacggc acattttgct ctttcatata
    29701 ccgctttaat aaattggggt aagaagtggc aatcacagca tcttctaaat ctttgatatt
    29761 gttataattt ttatcacgat caatagctaa cgataaacgg cagccaccaa aatctaactg
    29821 acgaagtttt ttataggcaa cattctcacc agcacttaat cgccctaatt ccacttcctc
    29881 taatacattt tcaccgataa tcccaagatc aactacgccg tcaaaaacta agcctggaat
    29941 gtcgtcatca cgcacccgta aaatttcaat cggcatattt tctgaatagg caatcaggcg
    30001 ttgatcgttc caaatgattt tcacgccaca ttgtttaagc aactcactac attcttggct
    30061 taagcgacct tttttctgca tcgcaattct taatcgattt tgtgttgtca ttgttgtttc
    30121 cttcttatgt tttaaattgt aaaaataaaa aaacctctcg aaatcacttc cgagagggtt
    30181 aaatttatgc tgcgtttagg cgtactcgga agtcttatct tccgcacata ccaaatgccc
    30241 gaaagattat tcaggtaaat gatggtggtg atgagtacga ataaaagcca ttttgttgtt
    30301 ctccaaacta aattgcttta aaagatacgc ttaaattttg gcaatgacaa gtgttttttg
    30361 cgaaaaaatt gctatttttc atctctctaa aacaactatc gcaaacgttt gcgtaaagcg
    30421 gtataatttg cctgattttt tgcaaattca acaaagtagg aataacacta tgcaaatcag
    30481 cctcaaaaag atctactccg gcaaagtccg tgatctctac gaaatcgatg aaaaacgtat
    30541 gcttatggtt gccaccgacc gattatctgc ctttgatgtt attttagacg atcctattcc
    30601 tcgtaaaggc gaaatcctca cccaaatctc caacttctgg ttcaacaaat tagcccacat
    30661 tatgccaaac cacttcaccg gcgacagtgt gtttgacgtg ttaccgcaag aagaggcaga
    30721 agctattcaa catcgtgcgg tggtttgcaa acgcttaata ccggtgaaaa ttgaatcgat
    30781 tgtgcggggt tatttaaccg gctccgggct gaaagattac caacaaaccg gcacgatctg
    30841 cggcttaaca ttgccggaag gcttggttga ggccagcaaa ttaccgcaac cgatcttcac
    30901 accgtccagc aaagccgagg tgggcgatca cgatattaat atcagctacg aagagtgtga
    30961 acgccagatc ggtcaagaac ttgccgccaa agtgcgtgat gccgctctaa aactctacac
    31021 tgaagcggca aactatgccc tgaccaaagg aattattatt tgcgacacca aattcgaatt
    31081 cggcttagac gaaaacggtg aactaacgct aatggacgaa gtcctaaccc cggattccag
    31141 ccgtttttgg tcagttgaaa cctaccgaga aggcacaaat ccaccttcat ttgataaaca
    31201 attcgtgcgt gactggctgg aaaatagcgg ttggaacaaa caacccccag ccccgaaaat
    31261 accggcagag gtaattgaaa aaaccgtagc gaaatatcaa gaagcattgg atttattaac
    31321 caaataacac cacaagcggt caaatttacg ctattttttg caaaacaaaa acctgtaagc
    31381 caacacttac aggtttttta gttagtggta aaaagtgcgg ttattctacc gcacttttgc
    31441 aaaattttgt gtaaatctga ccgcttgtta gccttgcgaa gaaatacgtt tcatatctgt
    31501 catataacca cgtaattctt gaccgattaa ctcgattggg tggttacgga ttgcgtcatt
    31561 cacatcacgt aaggtaacgt tgtcgatttc cactgccgga gttggttcac ctaaatcgcc
    31621 tttctctaac gttgggataa ttttctccgc taaaatcggg gttgcaacgt gagagaataa
    31681 gtagttaccg tattctgcgg tatctgaaat taccacgttc atttcatata aacgcttacg
    31741 agcgattgta tttgcgatta acggtaactc gtgtagagac tcgtagtaag ccgattcttc
    31801 ataaataccg gctgaaacca ttgtatcaaa ggctaattca acccctgctt tcaccattgc
    31861 aaccattaac acaccgttat caaagtattc ttgctcagaa attttaatac cgtctgcttg
    31921 tggtgcgttt tcaaaggctg ttttacctgt ttcttcacgc cattttaata agttggcatc
    31981 gccgtttgcc cagtctgcca tcatcgttga tgagaactca ccactgatga tgtcgtccat
    32041 atgtttttca aataagaacg ctaattcttc tttgatttgc tcagaaagct cgaacgcacg
    32101 caatttggca ctgtttgata agcgatccat cattaaggtg ataccgcctt gttttaacgc
    32161 ttcggtaatg gtttcccaac cgtattggat caatttacct gcgtaagccg gatctttacc
    32221 ttccgacact aatttgtcgt agcacacgat tgaacctgct tgtaacatac cgcaaagaat
    32281 ggtttgttca cccattaaat cagatttcac ttctgctacg aatgaagatt ctaatacgcc
    32341 cgcacggtca ccaccggtag cacttgccca cgctttcgca atggctaaac cttcgccttt
    32401 agggtcattt tccgggtgaa cggcaattaa ggttggcaca ccgaaaccac gtttgtactc
    32461 ttcacgcact tccgtgcccg ggcatttcgg agcggtcatc acaaccgtta aatccggacg
    32521 aatttgctca ccttcttcca caatgttgaa accgtgtgaa taaccaaatg ccgcaccttg
    32581 tttcattaac ggcattacat cggcaactac tttagagtgc tgtttgtccg gcgttaagtt
    32641 aatgactaaa tccgcttcag gaattaattg ctcgtaagta cccaccacaa agccgttttc
    32701 agaagcacgt ttaaatgaag cacgtttttc agcaatcgct tcggcacgta aagcgtaagc
    32761 aatatctaag cctgaatcac gcatatttaa accttggttt aaaccttgag caccacaacc
    32821 cacaatcacg atttttttgc cttttaagaa attgcagcca tctgcaaatt catcacgatc
    32881 cataaagcgg caacgaccta actggtctaa tttttgacgt aaatttaaag tgttgaaata
    32941 gttagccatt ttttaatcct tatttgaatt aatgagattg atatgatgtt ttgtttgcac
    33001 attgttatag tttgatttga ttatacctta acctaacatt gcgtaaattg aaaatattaa
    33061 tatttcatat tgcataaaat gcaacttgca aaaattttgc caaatttaac cacttgcaat
    33121 ctctacgata aagtagaaaa taaccaccta atttaataga agatcaaaaa atgaaaataa
    33181 acagaatcat tttacaaagc tgtagcgaat gtgggcaaca agtgcgagtc ccgctcacgt
    33241 caaatggcaa tgccgtttgc ccggtctgcc ataatatatt acgcaaaagc aatacttgga
    33301 gcttgcaccg tagtgctttt ttggcattag ccattttaat tttgcttccc ttcgcactta
    33361 cttttccctt gatgagcatt gacttactcg gcatcaaaat taatgctacc gtatgggacg
    33421 gtatttggaa gatggcaacg gagggctacc cttacaccgc ttttatggtg ctagtctgcg
    33481 cggtaataat gccgattgca tttgtattgc taattttaac cattcagcta caacgtatta
    33541 ttcgccaacg cccccgttac acgctgattt tcttaactaa aataaaagaa tgggtaatgc
    33601 ttgatgtcta tttagttgct cttgcggttg ccgcttttaa aattcgagat tatgccgatc
    33661 tacaattcga tatcaactta atcgcctttg tgttggtaac actcttaaac accctacttt
    33721 ttattaaaac cgagccaaaa caagcatggg aacgttttta cccagaatat cacgccttgc
    33781 cgtttgatca cccaagcaat ccaacacttt gcccgacctg tgaatattgc tttgatgaaa
    33841 ctattttaga cttaaaagga cggcaacgct gccctcgttg tgaaagcaat ttatctattt
    33901 ccgacaacgt aaaaatacaa cgggtttggg cttgcttaat tgcagggact attatgatga
    33961 ttccggcaaa tattttcccg atttcgacaa ctgaactggc aggtcaggtt tcggcagatt
    34021 cattaatgtc cggcgtgctt ctgtttatgg aaatgggtag ctacaccgtg gcagcgattg
    34081 tgtttatcgc tagtattgcg gtgccggtga gcaaaattac cattattttt tatctcttgc
    34141 tggcaattca ttacaagtgg aaacacccga ttcattggca aatgaaacta ctacactacg
    34201 tccattttgt cggacgctgg tcaatgctgg atttattcgt gttatcattg atgatgtcgc
    34261 tactcgaacg agggcagatt ctcagtttct cggtagggga agccgctttc tattttggag
    34321 cagccgtatt cttaacgatg tttgcctctg caaatttaga ttccagaatg ttgtggaaga
    34381 ttcatactgt ccagaaaaca tcctaaataa agattttccg ataaataata cataacatgc
    34441 aaagtaagaa aagtagtacg taacccaaaa tctcaatccc tattgagtaa gaaagagccg
    34501 ataatgtagc accgatagcc agaaagaaat tagcaaatat aaaatagtct ttactatatt
    34561 tacttgaggc aattagggta tccattgcag tactaaagaa catttccaa
//
LOCUS       DANLTI010000009        33388 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.009, whole genome shotgun sequence.
ACCESSION   DANLTI010000009 DANLTI010000000
VERSION     DANLTI010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 33388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33388
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.009"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            46..1698
                     /locus_tag="PXB09_000364"
     CDS             46..1698
                     /locus_tag="PXB09_000364"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDL5232518.1"
                     /translation="MNGARFITESLKAHGVTTLFGYPGGAIMPTYDAIYDSGLDHLLC
                     RNEQGAAMAAIGYARATGKVGVCIATSGPGATNLITGLGDAALDSIPVVAITGQVASH
                     LIGTDAFQEADVLGLSLACTKHSFIVQNIEELPEILALAFQIAQSGRPGPVLVDIPRD
                     VQLAQTSALPIVYPKEPADAQDPNKLVVAKQLLATAKRPVLYVGGGVSMADGVQAVRN
                     FVKIANIPSVSTLKGLGTIDPTDPLYMGMIGMHGTKAANYAVQECDLLIACGARFDDR
                     VTGKLDTFAPHAKVIHIDIDNAEINKLRQAQVALKGNLIEAVNYLAQPLDIEPWREDV
                     RNLKQQFDFQYQENSGDGNIDAVALLHTLSQRKAKNSIVTTDVGQHQMWSAQHLTYHD
                     PKNYITSAGFGSMGFGLPAAIGAIKARAEDQVILITGDGSIMMNIQELGTLKRADLAV
                     KILLLDNQRLGMVRQWQSLFFHGRHSQTILDDNPDFVLLAKAFDIDGERIEKASEVSD
                     AIDRMFNAKGAYLLHVCIPQEDNVWPLVPPGACNADMLDDEV"
     gene            1708..1926
                     /gene="ilvM"
                     /locus_tag="PXB09_000365"
     CDS             1708..1926
                     /gene="ilvM"
                     /locus_tag="PXB09_000365"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDL5232519.1"
                     /translation="MEEYQLTLKANKRPETLERILRVIRHRGFEVKCLNVESTDSAFN
                     LNFTLASKRPLSLLSHQLEKLFDIIEIN"
     gene            2139..2612
                     /gene="nrdG"
                     /locus_tag="PXB09_000366"
     CDS             2139..2612
                     /gene="nrdG"
                     /locus_tag="PXB09_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDL5232520.1"
                     /translation="MENLRFSSEQIVWQEVPNETSLAFLITGCPLGCKGCHSADSWKA
                     CLGKELSSEYLSERLKRYQGLISCVLFMGGEWEAEKLLPLLQLAKKQGLNTCLYSGLE
                     QHEIAETLLHELTYLKTGRWIAERGGLESLTTNQRFTDLRNNQNLNHLFIRGASI"
     gene            2609..4390
                     /gene="nrdD"
                     /locus_tag="PXB09_000367"
     CDS             2609..4390
                     /gene="nrdD"
                     /locus_tag="PXB09_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDL5232521.1"
                     /translation="MIRLQPTQLDGKLHFINQYIQAKNAADGSKMDANANVTQKNIAT
                     MEQELMKDFFVQINRAKVSEKIAKIFGKETACEYLRQIEAHEIYVHDETSLKPYCVSV
                     TMYPFLRDGLTKLGGESKAPKHLASFCGSFINFVFAVSSQFAGAVATVEFLTYFDYFA
                     RKDYGDNYLQTHRSDIENHLQQVVYSINQPAAARGYQSVFWNISVYDKFYFEAMFSRF
                     VFPDFEKPNWETTSKLQLFFMQWFNKERSKAILTFPVVTAAMLTEKGKCKDDEFANQM
                     AKELSQGNSFFIYQSDNPDSLASCCRLRNEISDHSFSYSLGAGGVATGSINVITINMN
                     RLVQDNRDLSEEVSKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLHKQFLTIGINGM
                     AEAAESQGLTVGYNPDYIDFVQSRLKIIFQANQAAGEKYGVKFNTEFVPAENLGVKNA
                     KWDKEDGYFVPRDCYNSYFYVVEDEEINALDKFLLHGRELIEWLDGGSALHLNLDEAL
                     TQTGYRSLLDTAAKTGCNYFCINVKITICNECSHIDKRTLHSCSKCGSDNIDYGTRVI
                     GYLKRVSAFSSARQKEHSLRFYHREAA"
     regulatory      4447..4543
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            4600..5418
                     /gene="thiM"
                     /locus_tag="PXB09_000368"
     CDS             4600..5418
                     /gene="thiM"
                     /locus_tag="PXB09_000368"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDL5232522.1"
                     /translation="MTTSLPYHSHYLQKIRQNRPLVHNITNIVAANFSANGLLALGAS
                     PIMAAAIEEMESVPALSNAVVINIGTLIGKEVEAMELAGKTANRLGIPLILDPVGVGA
                     TPFRRQTVETLVDQIHFTAIRGNAGELATLAGVEWQAKGVDAGEGSHNVVEIAQQIAK
                     RYQTLVAISGETDVVSSGSHTALLHNGSPMFPKITASGCLLSAVCGAFLAVADKEHYF
                     NALIEACAAYAVAGEVAAQALKPTQYGQFAVNLLDTLGALTPETVEQYVRVEYV"
     gene            5411..6724
                     /locus_tag="PXB09_000369"
     CDS             5411..6724
                     /locus_tag="PXB09_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5232523.1"
                     /translation="MSKTHSNPTKVAVASMVGTAIEYFDNYIYTMAAVLVFNVQFFNS
                     DDPVSNQLMSLSVLALAFFTRPMGSILFGHFGDKYGRKQTLIASLLLMGLSTVAIGLL
                     PNYAAIGIWATVLLCLCRIGQGLGLGGEWGGAALVATEHAPKHKRAFFGIFPQMGAPI
                     GLLLANGAFYLVNLIYGEQTFLDWAWRIPFVASIVMIAIGLYIRIKISESPIFLKAEQ
                     QGKNRHTPLKTLFSQHLKPFMIGVLIATAGYVLFYILVAFTPIFVKSPVAVSQAGHAT
                     GLGLPVNLYTQYLLITSVIFGIAIFFSGIYSDKIGRRLLLLLATGATVVYGLTMPFFL
                     ENGTPTSIFIFLTIGMILIGLSFGPMAVILPELFPTEVRYTGASLAYTAAGILGASVF
                     TIIAVKINENFGLFGVGGYLSVASLLSFWALWQVHETKDLELEEI"
     regulatory      6860..6956
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            7024..8553
                     /gene="thiE"
                     /locus_tag="PXB09_000370"
     CDS             7024..8553
                     /gene="thiE"
                     /locus_tag="PXB09_000370"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDL5232524.1"
                     /translation="MSNYSNSPYQPNVIWTVAGSDSCAGAGLQTDLHTFHDFNLVGCS
                     VVTSVTAQHPHGVLCVTPVDDHTFRQQFEALLVQGYPNAIKIGLLCSQAQVEILCEYI
                     QKIRAESSHYCYVVYDPVAVASSGQALSDSILLQIVQQKLYPLVDLITPNGTELALLS
                     DTEIQTFGDVKTASHKLFAQGIKAVLAKGGHFEWLGETVRDYLLTANEIYAFSHARQQ
                     SVNTHGTGCTYASAVGAMLATGFDLADAVTVATAYLQKGLSEKQGRGQTALSSLCHTG
                     YPDDIAFFPQTELISAPLKLPKEPFAPTEYQLGLYPVVDSVKWLERLILVGVKTLQIR
                     IKNRPLAEIEQEIAHSVALAKQHNVRLFVNDYWQLAMKYQAYGVHLGQEDLATADLNA
                     IQQSGLRLGVSTHCYFEIMRALAVKPSYIAFGHVFPTQTKVMPSQPQGLTNLAKYVAL
                     VAPLNIPTVAIGGINEQSIENVMHTGVGSAAVVSAVTQAKDWQQAVKNLAKFANGGRN
                     E"
     gene            8546..9718
                     /gene="cytX"
                     /locus_tag="PXB09_000371"
     CDS             8546..9718
                     /gene="cytX"
                     /locus_tag="PXB09_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HDL5232525.1"
                     /translation="MNRTLSTLNSGLIWAGAGISASAIVVGTWIAPLGWQQGLLAIVL
                     GHLLGGILFFAAGLIGAKTGKNAMQTVQISFGRGSVFFSLANVLQLVGWTAIMIYTGA
                     EISNALSLALWEYSAFSLWAIVLGLLIVLWLFTGSNQVGKFKLVTLIAMFLLTLWLSI
                     KVLNGQENFPVSGEMPFSTAVELATIMPLSWLPLVSDYTAKAKKPFAATLSATIGYLI
                     TSAWMYALGLGMVLFTGQTEIAPMLLMTGMSLIGIMVMILSTVTTTFLDAYSAGVSAG
                     NITAKFKETPTAILVTIIGTLLAISLPVTQYENFLLLIGSVFAPMIAVQIADFFVLKR
                     HQAQPNVDWVAAGLWLVGFVLYHLLSYHQVHLLLGLTIPVMLVIFLSTIFVRRFTK"
     gene            9757..9966
                     /locus_tag="PXB09_000372"
     CDS             9757..9966
                     /locus_tag="PXB09_000372"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5232526.1"
                     /translation="MESLVLNNDWVVTPQAQLAYHTINGKADEERLNLLVARAGVRVA
                     KGFALNNGWNLQPYAEVNGIAEKGQ"
     gene            9974..10150
                     /locus_tag="PXB09_000373"
     CDS             9974..10150
                     /locus_tag="PXB09_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5232527.1"
                     /translation="MQVNQYQFGVAENKGRVQGSLGLSAGNGNHRLGLEASVASGKKL
                     KQPFNVLVNYRYQW"
     gene            complement(10191..12047)
                     /gene="sppA"
                     /locus_tag="PXB09_000374"
     CDS             complement(10191..12047)
                     /gene="sppA"
                     /locus_tag="PXB09_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDL5232528.1"
                     /translation="MLTILKAFYRIFRCIRECVINLFFILFILLLVPVVAFISSSGST
                     QKPVFNQGALRLNLDGYLADNREEFTDFYRLVQSELGSSEPFKISTFDVVQAISHAKN
                     DPKITGLVLDLQKLQSADFSSLDFIGNEINNFKQSGKPVIAVGEDYSQKQYYLASFAD
                     EIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAVEPFMRDDMSEEAK
                     QNARGWLNGTWQQTVATLAQNRNIEPQALDLSPANYIEKYKQAKGDDAQLALNQKWVS
                     QLVSSQESRDKLIAQFGKNSEGSYNQIEFLDYMTELNDRFAEVNAPKIAVVNVEGAIA
                     GGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAVASELIRQEVEAFQQAG
                     KPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVTFEKTAKNLGVSEDG
                     IATSALAQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMPKEVVDKVAQGQVW
                     LGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQWFAEQDDSLFGT
                     LARDFKAQLQFSVANWLDLPLLKQPQQQLETLSRFNDPKQMYLYCLNCGKID"
     gene            12150..12713
                     /locus_tag="PXB09_000375"
     CDS             12150..12713
                     /locus_tag="PXB09_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5232529.1"
                     /translation="MQILDLLHHRRSNKKFGDKAPNAEQLEQILKAGLRVPDHGRLKP
                     YRFVVIEKSGMPQFGECLKSAVAEFDMGEERLKKAEKLANQAPMIIGVVATLDDSIAK
                     VPSWEQMITAGCATYAIQLAANAQGFDTVWITNKWINGSALRSAFGCQESDKIIALIM
                     LGSPAEGEQIALAPESESLEGFVRYLK"
     gene            complement(12784..15108)
                     /locus_tag="PXB09_000376"
     CDS             complement(12784..15108)
                     /locus_tag="PXB09_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDL5232530.1"
                     /translation="MTDLNLKISQIIAGELNVGSHQILAAITLLGEGNTIPFIARYRK
                     EVTGGLDDTQLRHFETRLIYLREMDERRQTILKSIEEQGKLTDELKAKILSSESKTEL
                     EDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPKQDPETLAANFVDAEKGVADTKAA
                     LDGARYILMERFSEDAELLAKLRQYLTAYATLESKVIDGKEEEGEKFRDYFAHSEPFN
                     SVPSHRALAMFRGRNEGVLSLSLNADPTAEEGTKSSHCEEIIREHLGVIFNNQPADKW
                     REQVIAWTWKIKAALHLETELMATLCEKAEEEAIDVFARNLSALLMAAPAGARNTMGL
                     DPGLRTGVKVAVVDNTGKLLDTATIYPHTGREAEAQLAIFSLIKQHNVELIAIGNGTA
                     SRETERFAKAVIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLL
                     ARVAGMTKTLAQNIVAFRDENGRFTSRSELKKVPRLGPKAFEQCAGFMRIIGGKNALD
                     ASSVHPEAYPVVEKILQATTSTLAELMGNNSKIHSLNAKDFVDEQFGLPTVNDIFKEL
                     EKPGRDPRGEFKTAVFMDGVEEITDLKAGMILEGTVTNVANFGAFVDIGVHQDGLVHI
                     SMLSNSFVEDPHTVVKAGDVVKVKVLEVDAARKRIALTMRLDDKPTDKKEPTSGRNSA
                     EICKNTQKNDRLQSNNRNAFGNNAFADALKGWKK"
     gene            complement(15108..15662)
                     /gene="pilW"
                     /locus_tag="PXB09_000377"
     CDS             complement(15108..15662)
                     /gene="pilW"
                     /locus_tag="PXB09_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDL5232531.1"
                     /translation="MFAKFFPKMTACILIFLLAACSSLPPSSSEVEFNRSEAVKARIN
                     LALAYLEQNDFPKAKQNIDKALAHDEKDYLPYSVLAYYYQQTGDAENAEKAYQTALKL
                     SQNRPDVLNNYGTFLCKQGQFQQAYQQFEQAVKSKAPYYHQADSLENMVLCAKKEPNL
                     QKIAETLTELEKLDKPRANLLKEN"
     gene            15882..16133
                     /locus_tag="PXB09_000378"
     CDS             15882..16133
                     /locus_tag="PXB09_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5232532.1"
                     /translation="MKIVVFQRKALKQLRKIPTGAEIRRKCDDLAYFPYCANIKALTN
                     HQYDYRFRVGNYRIFFNIEGETMNIVSIEEVKKRDERTY"
     gene            16117..16464
                     /locus_tag="PXB09_000379"
     CDS             16117..16464
                     /locus_tag="PXB09_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5232533.1"
                     /translation="MKELTNIQYLNNEEGKPAFAVLPIATLEWLKQKANIKTAIETGI
                     PSAVAGIALDNNYSALRAWREYLGLTQEEVAQRLGISQSAYSQHENAKNLRKTTRIKI
                     AYALGLNEEQLDF"
     gene            complement(16505..17665)
                     /gene="trmG/rlmN"
                     /locus_tag="PXB09_000380"
     CDS             complement(16505..17665)
                     /gene="trmG/rlmN"
                     /locus_tag="PXB09_000380"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDL5232534.1"
                     /translation="MSELITNAGCGSAEQPKEKINLLNLNRQEMRELFAEMGEKPFRA
                     DQLMKWIYHFGEENFDNMSNINKVLREKLKRIAEIKAPEVAVEQRSADGTIKWAMQVG
                     DQQIETVYIPEDDRATLCVSSQVGCALACTFCSTAQQGFNRNLSVAEIIGQVWRASKI
                     IGNFGVTGVRPITNVVMMGMGEPLLNMNNVIPAMEIMLDDFAYGLSKRRVTLSTSGVV
                     PALDKMREQIDVALAISLHAPNDELRDELVPINKKYNIKMLMDSVNKYREVSNANHGK
                     VTIEYVMLDHVNDSTNHAHQLAEVLKNTPCKINLIPWNPFPEAPYGKSSNSRVDRFQK
                     TLMEYGFTVTVRKTRGDDIDAACGQLAGDVIDRTKRTLEKRKFGQGIAVKTH"
     gene            17925..18821
                     /locus_tag="PXB09_000381"
     CDS             17925..18821
                     /locus_tag="PXB09_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDL5232535.1"
                     /translation="MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAG
                     DKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLWNGMNLERWFERFFENVKGKPAV
                     VVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
                     AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGS
                     PKQVKKVIDGVKANKIPVVFSESTVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVP
                     TYLDLLKVTIGTIVEGFERSKK"
     gene            18834..19577
                     /locus_tag="PXB09_000382"
     CDS             18834..19577
                     /locus_tag="PXB09_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDL5232536.1"
                     /translation="MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNG
                     GGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNLVSYVPQSEEVDWQFPVSVYDVV
                     MMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
                     ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNR
                     TLLAKGKTEEIFNNQNLERVFGGLLHYQK"
     gene            complement(19634..20443)
                     /locus_tag="PXB09_000383"
     CDS             complement(19634..20443)
                     /locus_tag="PXB09_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5232537.1"
                     /translation="MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMG
                     DAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSVGYLKENSRLKEDTVMGIVFSGM
                     FAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC
                     FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRF
                     DSMLLIALGVAIFSSVFGTLLSYHIDAATGPTIILVQAAIFFLSFAYSKIH"
     gene            complement(20436..21296)
                     /locus_tag="PXB09_000384"
     CDS             complement(20436..21296)
                     /locus_tag="PXB09_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5232538.1"
                     /translation="MLDLLLEPFTYNYMQKAIFVSMGVGLVCAFLSAFLMLKGWSLIG
                     DALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSILWVKSLTKIKEDAVIGFIFTTF
                     FALGMFIVSLNPTSVDVNSIVMGNILGIADDDLWQVVLIIAISLLGLILFWKDLLLVF
                     FDEHHALSVGLSPLRYKVIFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRF
                     PRLVLIAMLIGTLTSGIGAYLSYFLDGATGAVIVCLQTLIFLFAFCFAPKYGLITQKR
                     KLHRVEVQNA"
     gene            complement(21370..22155)
                     /locus_tag="PXB09_000385"
     CDS             complement(21370..22155)
                     /locus_tag="PXB09_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDL5232539.1"
                     /translation="MMKKITILGLGWLGLPLAEALQNKGWRVAGTKRTVGELAIECYP
                     LDLNALAVTSEIEQLLAADALVIALPLSQIRPENYGCGIQTLVSLAIEKGLKHLVFTS
                     STSVLPMKSGVFDENAVVDSANLLVKMENWLLSQPIHCDILRLAGLVGKKRHPVFYLA
                     GKQNLSGAGQPVNLVHLEDCIAAISLLLEQPNGQRIFHLCAEQHPSRKDYYSEMAKRF
                     GLADLHFSEENQPLVRLIKADKICQELGFRYYYPDPYQFKVDI"
     gene            complement(22243..22318)
                     /locus_tag="PXB09_000386"
     tRNA            complement(22243..22318)
                     /locus_tag="PXB09_000386"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22283..22285),aa:Gly,seq:gcc)
     gene            complement(22345..22431)
                     /locus_tag="PXB09_000387"
     tRNA            complement(22345..22431)
                     /locus_tag="PXB09_000387"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22395..22397),aa:Leu,seq:taa)
     gene            complement(22450..22525)
                     /locus_tag="PXB09_000388"
     tRNA            complement(22450..22525)
                     /locus_tag="PXB09_000388"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22490..22492),aa:Gly,seq:gcc)
     gene            complement(22691..23929)
                     /gene="pepT"
                     /locus_tag="PXB09_000389"
     CDS             complement(22691..23929)
                     /gene="pepT"
                     /locus_tag="PXB09_000389"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDL5232540.1"
                     /translation="MKQSLLNRLLRYTQIHTTSDPKSQTVPSSQQQWDLLHLLKTEVE
                     AMGLSEIYLDPNGYLFASLPANIDKTLPVLGLIAHVDTSPDFNGENVKPQVIEAYQGG
                     NILLNGSGDYLSPTDFPNLNKLIGDTLVTTDGTSLLGADDKSGIAIILSAIEYLQANP
                     HIPHGKIRIGFTTDEEIGRGADHFDVNAFGADVAFTFDGGPLGELQYENFNADAATVT
                     FFGRSVHPGTAKGKMINALERACEFQHRLPPHLTPATSEGREGFIMLHGIEGGIDKAE
                     IHYILRSFERDELAAFGKMLNDTLAEMQQIYGEHCGKVEIVEQYRNMREVLDDYGYLV
                     EIAENAMREQGIEPNLEPIRGGTDGSRLSFMGLPCPNLFTGGENFHGRFEFISVDTME
                     KATKVVIDICRKFADYDFNK"
     gene            complement(23949..24338)
                     /locus_tag="PXB09_000390"
     CDS             complement(23949..24338)
                     /locus_tag="PXB09_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5232541.1"
                     /translation="MYMLDTNTVSYFFRGNANVVAKLKSINPERLCISSVTAAELVYG
                     VAKRNNGQLSQFLDYFLSSVKVLDWNYRCAELYGKLRAEMEKNGKVMGVQDQMIASHA
                     LAEECILVSSDQAFKMVPDLKLENWLH"
     gene            complement(24339..24599)
                     /locus_tag="PXB09_000391"
     CDS             complement(24339..24599)
                     /locus_tag="PXB09_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5232542.1"
                     /translation="MEKIARLFRNGRNQAVRLPVEFEFDAEQVYVSKKENGDILLSLR
                     SRNTEHWQRLFELLPAVVCDETFLDTKERNQSFEQRDPFEVA"
     gene            complement(24715..24927)
                     /locus_tag="PXB09_000392"
     CDS             complement(24715..24927)
                     /locus_tag="PXB09_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5232543.1"
                     /translation="MRDEYDFSNAVKNPYAKGLKSKSVVTIRIEDDVISYFKQLAEEV
                     NLPYQTLINLYLKDCVEQKRKPTISW"
     gene            complement(24928..25215)
                     /locus_tag="PXB09_000393"
     CDS             complement(24928..25215)
                     /locus_tag="PXB09_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5232544.1"
                     /translation="MEEINGFEWDSEKALRNQQKHGVSFIEAVSVFYDNNAMLIPDPD
                     HSSREERFLLLGRSNKDNLLVVVHCERNTNIRIISARLATKRESGQYKGVH"
     gene            complement(25378..28911)
                     /gene="mfd"
                     /locus_tag="PXB09_000394"
     CDS             complement(25378..28911)
                     /gene="mfd"
                     /locus_tag="PXB09_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDL5232545.1"
                     /translation="MSLISLNLPKSDGNFQDHQTLGNLVGHSDTLAISQAARAFYGLT
                     VVVTPDTRTALRLEKALPQFAGLPVQLFPDWETLPYDNFSPHQDIISARLSALFELQQ
                     GRQQILLLPINTLMQKVCPPNYLANNVLLIKKGDRFSIQKLRLQLENAGYRAVEQVLE
                     YGEYAVRGSILDLFPMGAEEPFRLDFFDDEIDSIRTFDVDNQRTKTEIAEINLLPAHE
                     FPTDSNGIEHFRAKFREKFGEIRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFD
                     YFPAQTLFITFADIQQKAEQFHQDTQNRYESHRVDPMRPLLPPSDLWFAIDEVNRWLK
                     GYPRLTITSEKIRKSAAKMNANVANLPDIAIQSSAKEPFSAFQQFRQKFDGNILFSVE
                     SEGRRETLLDLLAPLGVKPKQVNSLDEAQGLPFSLIISPLDQGFVVETGGHGTRPYDD
                     ELNTNGENDNNYVGAGPVPARNLAIICETDLLGERVQTRREKNRKAVNPDTLIRNLAE
                     LKIGQAVVHLENGVGRYGGLTVLDAGGIKAEYLVLHYANDAKLYVPVASLHLISRYIG
                     GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQTGFAFAYDKAEFDQ
                     FSATFPYEETDDQKIAINAVISDMCQAKAMDRLVCGDVGFGKTEVAIRATFLAVMNHK
                     QVVILAPTTLLAQQHYENFKDRFANYPVNVEVLSRFKTAKEQKTILQNVAEGKVDILV
                     GTHKLLQDDVAFRDLGLLVIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMA
                     LNGMRDLSIIASPPARRLLIKTFVRQSDEMVIREAILREILRGGQVYYLHNDVATIEN
                     CAEKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANT
                     IIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPHPKTLTKDAEQRLEAMSTIDNLG
                     AGFALATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLENAVKALQEGREPSLDEIT
                     QHQAEIELRVPALLPDDYLPDVNMRLSFYKRIASSENLQSLNDLKVELIDRFGLLPEA
                     TKNLFAITQLRLSAQTLGIKKIDAGIHGGYLEFKPTAQPDPMKFIALIQKQPAVYSFE
                     GAVKFKFRLALEDNRKRLEFVENLLREVVGG"
     gene            29072..30289
                     /locus_tag="PXB09_000395"
     CDS             29072..30289
                     /locus_tag="PXB09_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter"
                     /protein_id="HDL5232546.1"
                     /translation="MKNKILGSALMIAGTTIGAGMLAMPLTSAGMGFGATALLLVGLW
                     ALLAYTGLLFMEVYQTAPQKDVGVASLAEQYFGLIGRVLATFSLLVLLYALLAAYITG
                     GGSLLAGVMPEMADADMKLKISILIFTAVLGTFVVVGVKSVDGLTRVLFLGKIVAFIA
                     VLLMMLPKAKLENLTAIPLDNLLIISAIPIFFTAFGFHVIMGTINSYLDADIGKIRKS
                     IYIGTAIPLVAYLLWQLATHGVLSQNEFTTILTQDPTLNGLVKATSQITGSTILGEMV
                     RLFSVLALITSFLGVSMGIFEGVGDLLKRLNLPTNRLWLTIATFTPPILFALFYPNGF
                     IKALGYAGLLFAFYGMILPIGLAWKARRQYPNLPYRVIGGNLALVVALIAGIIIMVIP
                     FLIQAGYLPQAVG"
     gene            complement(30369..30875)
                     /gene="hutX"
                     /locus_tag="PXB09_000396"
     CDS             complement(30369..30875)
                     /gene="hutX"
                     /locus_tag="PXB09_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization cystosolic carrier protein
                     HutX"
                     /protein_id="HDL5232547.1"
                     /translation="MISIEQQTALRNELAENPGQILEMLAAKYQCTLEEVMLNLPAEM
                     LKVTEGERFAEVLQQIHEWDDAITLISHTEDTIIEFVGKLPSGSISRGFYNFEHKEGG
                     GLQGHLRYENCAKIYLLDRPFMGKRTVSLIFINKKGNAMFKIFVGREKIGGALKEHQI
                     KALYQLIG"
     gene            complement(30930..33008)
                     /locus_tag="PXB09_000397"
                     /pseudo
     CDS             complement(30930..33008)
                     /locus_tag="PXB09_000397"
                     /inference="COORDINATES: protein motif:HMM:TIGR01786.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
     gene            complement(32975..33358)
                     /locus_tag="PXB09_000398"
     CDS             complement(32975..33358)
                     /locus_tag="PXB09_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5232548.1"
                     /translation="MVFTSYSIKSKKLCPTILALSVSSILSSQATYAEETTAELSEVN
                     VVAKEDVKASIEKKNKEIIQQELIQNNRDLVRYSPDVGIVNQGRHQKGFAIRGVEDNR
                     VGISIDGVSLFLIQKKIPFINAMVI"
BASE COUNT         9411 a         7504 c         6921 g         9552 t
ORIGIN      
        1 attgcctggt tttaaaataa taaaaatatt aaggacacaa catccatgaa tggagcaaga
       61 tttatcaccg agagtttaaa agctcacggg gtaacgacac tttttggcta tccgggcggg
      121 gctattatgc ctacctatga tgcaatttat gattcaggct tagatcattt actttgccgc
      181 aatgaacaag gtgctgcaat ggcagctatc ggttatgccc gtgcaacagg taaagtaggg
      241 gtttgtattg cgacctccgg ccctggggca actaatttaa tcaccggttt aggcgatgcc
      301 gcacttgatt ctattcctgt ggtagcaatt accggacaag ttgccagcca tttaatcggc
      361 actgatgcct tccaagaagc tgatgtacta ggtttgtcac tcgcttgcac taaacacagt
      421 tttattgttc agaatattga ggagctccct gaaattttag ccctcgcatt ccaaattgca
      481 caaagtggca gacctggtcc ggtgctggtc gatattccac gtgatgtgca actagctcaa
      541 acttcggctc tgcctatcgt ttatcctaaa gaacctgccg atgcacaaga tcccaacaaa
      601 ttagtggttg ccaaacaatt attagccacc gccaaacgcc cggtacttta tgtcggcggt
      661 ggcgttagta tggctgatgg tgtacaagcg gtcagaaatt ttgtaaaaat tgcaaatatt
      721 ccgtctgttt ctaccttaaa agggttaggc actatcgatc caaccgatcc gctctatatg
      781 ggaatgatcg gtatgcacgg cacaaaagca gcaaattacg cggtacaaga gtgtgattta
      841 ctcattgcct gtggtgcccg ctttgatgac cgtgttaccg gcaaattaga cacttttgcc
      901 cctcacgcta aagtgattca cattgatatc gacaatgcgg aaatcaacaa gctccgtcaa
      961 gcacaagttg ccttaaaagg gaatttgatt gaagccgtga attacttggc tcaaccgtta
     1021 gatattgaac catggcgtga agatgtgcgt aatttaaagc agcaatttga ctttcaatat
     1081 caagaaaata gtggtgatgg caatattgat gccgtggcgt tattacacac gctttcacag
     1141 cggaaagcca aaaacagcat cgtcactacc gatgtagggc agcatcaaat gtggtcggca
     1201 caacatttaa cttatcacga tccgaaaaac tatatcacct ctgccggttt tggctctatg
     1261 ggttttggct tgcctgcggc gattggggca atcaaagctc gagcggaaga tcaggttatt
     1321 ttaattaccg gtgatggctc gattatgatg aatattcaag aactcggcac gcttaaaaga
     1381 gctgatttag cggtcaaaat cctattactg gataaccaac gtttaggtat ggttcgccaa
     1441 tggcaatcgc tgttcttcca cgggcgacac agccaaacca ttttagatga taaccctgat
     1501 tttgtgttgt tggcgaaagc ctttgatatt gacggtgagc gaattgagaa agcgagcgaa
     1561 gtgtcagatg caatagacag aatgttcaat gccaaagggg cttacttact tcacgtttgt
     1621 attccacagg aagataacgt ttggccactg gtaccgccgg gggcgtgtaa tgccgatatg
     1681 ttagacgatg aggtatagga gaataagatg gaagaatatc aattaacgct taaagctaac
     1741 aaacgccctg aaaccttaga gcgtatttta cgggttatac gtcaccgtgg ttttgaggtg
     1801 aaatgcttaa atgtagaatc aacagacagc gcctttaacc taaattttac attagcaagt
     1861 aaacgtccac tctctctttt aagccatcaa ttagaaaaac tgtttgatat cattgaaatc
     1921 aattaatcag acttttcatt cgccgtgtaa aaaaatacac ggctttttta tgcttaaaat
     1981 ttatcattcg ctatcctttt gattttattc atttcttcaa atttcaactc ttttttttca
     2041 cttattgctc tttattttcc cattcaacag atctaacata ctatatatag tgttaaataa
     2101 tgttaaaaaa cacaatatat tgtgttaatg aattagtaat ggaaaatctc agattcagct
     2161 cggaacaaat tgtttggcaa gaagtgccga atgagacctc acttgctttt ctgattacag
     2221 gctgcccgct tggctgtaaa ggttgccata gtgcggatag ctggaaagcc tgtcttggga
     2281 aagagcttag cagtgaatat ctctctgaac gcctaaaacg ctaccaaggc ttaattagct
     2341 gcgtattgtt tatgggcgga gaatgggaag cagaaaaatt actgccgctg ttgcaactgg
     2401 caaaaaaaca ggggctaaac acctgtcttt atagtggttt ggagcagcac gaaatcgccg
     2461 agactttatt acacgagcta acctacttaa aaaccgggcg ttggattgcc gaacgaggag
     2521 gattggaaag tttaaccacc aaccaacgct ttactgattt acgcaataac caaaatctta
     2581 accatctttt tattcgagga gcttcaatat gattcgctta caaccgacac aattagacgg
     2641 aaaactacat ttcattaacc aatatattca agccaaaaat gccgcagacg gttcaaaaat
     2701 ggacgccaac gctaacgtca cgcaaaaaaa catagcgaca atggaacagg agctaatgaa
     2761 agattttttt gtgcaaatca accgagcaaa agtgagtgaa aaaattgcaa aaatttttgg
     2821 aaaagaaacc gcttgtgaat atttacgtca aatcgaagca cacgaaattt acgtacacga
     2881 tgaaaccagc ctaaaaccct actgcgtttc agtcactatg taccctttct tgcgtgatgg
     2941 tttgactaaa ctcggcggcg aatccaaagc cccgaaacat ttagcctcat tctgcggttc
     3001 ttttatcaat tttgtctttg cagtcagttc tcagtttgcc ggtgcagtcg ccacggttga
     3061 atttctgacc tattttgact attttgcccg caaagattac ggcgataatt acttacagac
     3121 tcatcgttca gatattgaaa accacctgca gcaggttgtg tatagcatca accaaccggc
     3181 agccgctcgt ggttatcaaa gcgtcttttg gaatatttca gtgtatgaca aattctattt
     3241 tgaagcgatg tttagccgtt ttgtttttcc tgattttgag aaaccaaatt gggaaaccac
     3301 ttcaaaatta caacttttct ttatgcaatg gttcaataaa gagcgaagca aagcgattct
     3361 cactttccct gttgtgaccg cagcaatgct taccgaaaag ggcaaatgta aagatgacga
     3421 gtttgccaat caaatggcaa aagagctatc tcaaggcaat tcattcttta tttatcaatc
     3481 agataatccg gattcccttg cttcttgctg ccgcttgaga aatgaaatca gcgatcatag
     3541 cttctcctat tcattagggg ctggaggtgt tgcgacaggt tcaatcaatg taattactat
     3601 taatatgaac cgtttggtgc aagataaccg tgatttaagc gaagaagtca gcaagatcca
     3661 taaatatcaa tacgcttacc gcaaactgat ggaagagtat ttagctgccg gtatgttgcc
     3721 ggtttacgat gccggtttta tttcactgca taaacaattc ctgactattg gcattaacgg
     3781 aatggcagaa gctgctgaat cacaaggttt aaccgtaggt tacaatccag actatattga
     3841 ttttgtgcaa tctcggttaa aaattatttt ccaagctaac caagcagccg gtgaaaagta
     3901 tggggtaaaa tttaataccg aatttgtgcc tgctgaaaat ttaggggtca aaaacgccaa
     3961 atgggacaaa gaggacggct atttcgtacc acgagattgc tacaattcct atttctatgt
     4021 ggtagaagat gaagaaatta atgctttgga taaattctta ctgcacggca gagagctgat
     4081 tgaatggctg gacggaggct ccgctctaca cttgaattta gacgaagcct taacccaaac
     4141 cggatatcgc tccttgctgg ataccgccgc taaaaccggc tgcaattatt tttgtattaa
     4201 cgttaaaatc acgatttgca acgaatgtag ccacatcgac aaacgcacgt tgcacagttg
     4261 tagcaaatgt ggctccgata atattgatta cggcactcgg gtaatcggct atttaaaacg
     4321 agtctccgcc tttagttccg cccgccaaaa agagcacagc ttgcgtttct atcaccgaga
     4381 agcagcttaa ttgaaaactg cagttgtagc cctttacaac cgctttttta gtgattatat
     4441 taaagcctca tttagtcggg gtgcttgcct aagggcaagc tgagaaatac ccgttgaacc
     4501 tgatgcagtt agcactgacg taggaaacta aaggcgtaaa cccatctatt ccccgttggt
     4561 gttggtgcgt tgtttttcaa tcatattaag gaataaacga tgaccacatc actcccctat
     4621 cactcgcatt atttgcaaaa aattcgacaa aatcgaccgc ttgttcacaa cattaccaac
     4681 attgttgccg ctaatttttc tgccaacggc ttattggctc ttggtgcttc tcccattatg
     4741 gcagctgcta ttgaggagat ggaatccgtg ccggcactca gtaacgccgt ggtgattaat
     4801 atcggcacgc ttatcggcaa agaagtagaa gcaatggagc ttgctggcaa aaccgccaac
     4861 cgtttaggta ttccgctcat tcttgaccct gtcggcgttg gagcaacacc tttccgccgt
     4921 caaacagttg aaaccttagt cgaccaaatt cacttcaccg ccattcgtgg aaatgcgggg
     4981 gaactagcta ccctcgccgg tgtagaatgg caagccaaag gcgttgatgc cggcgaaggc
     5041 tcgcataatg tggttgaaat cgcccaacag attgccaaac gttaccaaac cttagtcgca
     5101 atcagtggtg aaaccgatgt ggtaagctct ggctcacaca cagctttatt gcacaacggc
     5161 agcccgatgt tccccaaaat taccgcttca ggctgtttat taagtgcggt atgcggggca
     5221 ttcttagccg ttgccgacaa agagcactat ttcaacgcac ttattgaggc ttgcgccgct
     5281 tatgccgttg caggcgaagt ggctgctcaa gcactcaaac caactcaata cgggcaattt
     5341 gccgtcaatc tgctggatac ccttggggca ttaacgcctg aaaccgttga gcaatatgtg
     5401 agggttgaat atgtctaaaa ctcactcaaa cccaactaaa gtggcggttg cctcaatggt
     5461 cggcacggcg attgaatatt ttgataacta catctacacg atggcagcag tgctggtgtt
     5521 taatgtgcag ttttttaata gcgatgatcc ggtttccaac caattaatgt cgctttccgt
     5581 actagctctt gcctttttca cccgcccgat ggggtcgatt ttattcgggc atttcggcga
     5641 taaatacgga cgcaaacaaa ctctgattgc ctcgctctta ttaatgggct tatctaccgt
     5701 agcaatcggg cttttgccta attatgccgc cattggcatt tgggcaaccg tgttactctg
     5761 cctctgtaga atcggacaag gtttaggctt aggcggcgaa tggggcggag ctgctctcgt
     5821 tgccactgaa cacgccccga aacacaagcg ggcatttttt ggtatttttc cgcaaatggg
     5881 cgccccaatc ggcttgctgt tggcaaacgg agcgttctac ttggtgaatt taatttacgg
     5941 tgaacaaacc ttcttggatt gggcgtggcg aattccgttt gtcgcttcta ttgtgatgat
     6001 cgccattggg ctttatatcc gaattaagat cagcgaaagc ccgattttcc ttaaagcgga
     6061 acaacaaggt aaaaaccgcc ataccccgct taaaactttg tttagccaac acctcaagcc
     6121 ttttatgatc ggcgtgctga ttgccaccgc cggctatgtg ttgttctaca ttttagttgc
     6181 tttcaccccg attttcgtca aaagcccggt ggcagtttct caagcaggac acgctacagg
     6241 cttaggttta ccggtaaatc tctacaccca atatttgctg attacctccg tgattttcgg
     6301 cattgcgatt ttcttctccg gcatttattc agacaaaatc ggacgccgtt tactgctgtt
     6361 acttgccaca ggagcaaccg tagtttacgg cttaacaatg ccgtttttcc tcgaaaacgg
     6421 cacaccgact tcgatcttta ttttcctcac cattggaatg atcttaatcg gcttaagctt
     6481 cggcccgatg gcagtaattc tacccgaact cttcccaaca gaagtacgtt acacaggggc
     6541 ttcgcttgcc tacaccgctg ccggtatttt aggagctagc gtgttcacta ttattgcggt
     6601 caaaatcaat gaaaatttcg gcttattcgg tgtaggcggc tatttatcgg ttgcctcatt
     6661 actgagcttc tgggcattgt ggcaagtcca cgaaaccaaa gatttggaat tagaggagat
     6721 ataaaaaacc actcacttaa cgacggggca agttaccacc ttgccccaag atgagggaat
     6781 gcaaatttcc ctctaataga cttcacaacg gatattttgc atttttttat aaaaaataac
     6841 cgcttgtaag ctatactaaa aacgcttgtc ggagtgccgt aaggctgaga tcgcaacagc
     6901 gagatccgtg gaacctgtag gttagtacct gcgtagggaa caagttttac ccaaattcag
     6961 attttgggat cattaccaca tctctggcaa gcaaaaccct aagcatatta tgaggatttt
     7021 gcgatgtcta attattcaaa ctctccatac caacctaacg tcatttggac ggttgccggc
     7081 tcagattcct gtgccggtgc cggtctgcaa accgatttac atacctttca cgattttaac
     7141 ctagtgggtt gttcagtagt tacttctgta acggctcaac atccgcacgg tgtgctgtgt
     7201 gtaacgcctg ttgatgatca caccttccgc caacagtttg aagccttgct ggttcaaggc
     7261 tacccgaacg caatcaaaat cggcttactc tgctcgcaag cacaagtaga gatcttgtgt
     7321 gaatatatcc aaaaaatccg tgcagaaagc tcgcattatt gttatgtggt ttacgaccct
     7381 gtggcagtgg caagcagtgg gcaggcgtta tccgacagta ttttattgca gatagtgcaa
     7441 caaaaattgt atccgctggt ggatttaatc actccaaacg gcactgaact cgctttatta
     7501 agcgacacag aaatccagac ctttggtgat gtgaaaaccg ctagccacaa actgtttgca
     7561 cagggaatca aagccgtgtt agccaaaggt ggacattttg aatggctggg ggaaacggta
     7621 agagattatc tgctgactgc aaatgaaatt tatgccttta gtcacgcccg acagcaaagt
     7681 gtgaataccc atggcacagg ttgcacctat gcttcagcgg ttggagcgat gttggcaacc
     7741 ggctttgatt tagctgatgc cgtcactgtt gccaccgctt atttgcaaaa aggcttatcg
     7801 gaaaaacaag gcagagggca aactgcttta agttcacttt gccacaccgg ctaccctgat
     7861 gatatcgctt tcttcccaca aaccgagctg atttctgccc ctcttaaatt gccgaaagag
     7921 ccttttgctc caacggaata tcaacttggg ctttaccctg ttgtagatag cgttaaatgg
     7981 cttgaacgct taattcttgt aggggtaaaa accttgcaaa ttagaatcaa aaatcgaccg
     8041 cttgcagaga ttgagcaaga aattgcccat tcggtcgcac tggcgaaaca gcacaatgtg
     8101 cgtttgtttg taaatgatta ctggcagtta gccatgaagt atcaggctta cggcgtgcat
     8161 ttagggcagg aggatttagc caccgccgat ttaaatgcaa ttcagcaatc tgggttacgg
     8221 cttggtgttt caacccactg ctactttgaa ataatgcggg cattggcggt gaaaccgtct
     8281 tatatcgctt ttggccacgt tttccctact caaaccaaag taatgccgtc tcaaccacaa
     8341 ggcttaacaa atttagccaa atatgttgct ctcgttgcac cgcttaacat tccaactgtg
     8401 gcgattggtg gaattaatga gcaaagcatt gaaaatgtaa tgcataccgg tgtcggcagt
     8461 gccgcggtgg taagtgccgt tacccaagca aaagattggc aacaagcggt caaaaactta
     8521 gcaaaatttg caaatggagg ccgtaatgaa tagaactctt agtacgctaa acagtggttt
     8581 gatttgggcg ggagcgggca ttagtgccag tgcaatcgtg gttggcactt ggattgcccc
     8641 acttggctgg caacaaggct tgctggcgat agtgctaggg catttattag gcggcatttt
     8701 gttttttgct gccggcttaa ttggggcgaa aaccggcaaa aatgcgatgc aaacggtgca
     8761 aatttccttt ggcagaggct cggtgttttt ctcccttgcc aatgtgctac agcttgttgg
     8821 ttggacagcc attatgatct atacaggggc agagatcagt aatgccctta gccttgcctt
     8881 atgggaatat tcggctttct cgctttgggc aatcgtgctt gggttgctga ttgtgctatg
     8941 gttatttacc ggctctaatc aggtcggaaa attcaagtta gtgacattga tagcgatgtt
     9001 tttgctcacc ttatggctaa gcattaaggt attgaatggg caggaaaatt ttcctgtttc
     9061 gggtgaaatg ccgtttagca ccgcagtgga attagcaact attatgcctc tttcgtggct
     9121 acctttggta tcagactata ccgctaaagc gaaaaagcct tttgccgcga ccctttcggc
     9181 gaccataggc tatttgatca ccagtgcgtg gatgtatgcg ttaggtctgg gtatggtgct
     9241 atttaccggg caaaccgaaa ttgcccctat gttactaatg acaggaatga gccttatcgg
     9301 cattatggtg atgattcttt cgactgtgac taccacgttt cttgatgcct attccgccgg
     9361 tgtcagtgcc ggcaatatca cggcaaaatt caaagaaacc ccaaccgcca ttctagtcac
     9421 aatcatcggc acgctactgg caatcagttt accggttacc caatatgaaa atttcctgct
     9481 gctgataggc tcggtattcg ccccgatgat tgccgtgcaa attgcggatt tctttgtgtt
     9541 aaaacgccac caagcacagc ctaatgttga ttgggttgct gccggattat ggcttgtcgg
     9601 cttcgtgcta taccaccttc tctcttacca ccaagtgcat ttactactcg gcttaaccat
     9661 tccagtgatg ttagtgattt ttctcagcac catttttgtg aggaggttca caaaatagaa
     9721 agataagcgg ttcaattgga gtgaaaattt gctaaaattg agtcgcttgt tttaaacaat
     9781 gactgggtag taacaccaca agctcaactt gcctaccaca ccattaacgg taaagccgat
     9841 gaggaacggt taaatctttt agttgcccgt gccggcgtaa gagtagcaaa aggctttgcc
     9901 ttgaataatg gttggaatct gcaaccttat gcggaagtaa acggcattgc tgaaaaaggc
     9961 caatagtacg aaagtgcaag taaaccaata tcagtttgga gttgccgaaa acaagggcag
    10021 agtgcaaggt tcacttggct tgagtgcagg aaacggtaat caccgtttag gtttagaggc
    10081 atcagttgct tcaggtaaga aactgaaaca accatttaat gtattagtaa attatcgtta
    10141 tcaatggtaa tttaagaggg caggtgaaaa cctgccctta aattcaataa ttaatctatc
    10201 ttcccacaat ttaaacagta aagatacatc tgtttcggat cgttaaaacg tgaaagagtc
    10261 tctagctgtt gttgcggttg cttcaacagc ggtaaatcaa gccaatttgc cacgctaaat
    10321 tgtaattgag ctttgaaatc acgggcaagc gtgccaaata agctgtcatc ttgctccgca
    10381 aaccattgta agccgaactg ttcgacttta ggttggtttt ccgcttcacg tttttggttg
    10441 atcaattcag ataacgcatt atatgccaca ttaaaattgc ccaactcatc aaccaatccg
    10501 tgttttaacg catcagttcc cagccacact tgcccttgag ccactttatc taccacctct
    10561 tttggcattt tcctgccacg agaaaccagc tctaaaaaac ggtcgtagcc gttttcaatc
    10621 ccaatttgca gcacttctgc ctgctcttgc ggtaggcttt ttaaaccggc ttgttgtgct
    10681 agggcagaag tcgctatgcc gtcttcgctc acaccgagat ttttagcggt tttttcaaaa
    10741 gttactgcta aaccgaaaat accgatagag ccggtaagcg tattcgggct agcaataatt
    10801 ttatcgctgg tagccgcaat ccaataaccg cccgatgctg ccattccgcc cattgaagca
    10861 accaccggtt tgccggcttg ttgaaaggct tccacttctt ggcgaatcag ttcagacgcc
    10921 acagcactgc cgccggggct gttaatgcgt agaattaagc cttccacatt tttgtcatct
    10981 cgagcttgtt gcagtaattt taccagcgtc tcgctgccca cattcatttc gtcactttca
    11041 ccgccagcaa tcgccccttc cacattcact accgcaattt tcggagcatt cacttctgca
    11101 aagcggtcgt ttagttcagt catataatct aaaaattcaa tctggttata actgccttcg
    11161 ctgtttttgc caaactgtgc aatcagttta tcccgacttt cttggctgga cactaactga
    11221 ctaacccatt tttgatttaa tgccagttga gcatcatctc ctttagcttg tttatatttt
    11281 tcaatgtaat tggcaggcga taaatccagt gcttgcggtt caatgttgcg gttttgagct
    11341 agtgttgcca cagtttgttg ccaagtgccg tttaaccagc ctcgggcatt ttgtttcgcc
    11401 tcctcagaca tatcatcacg cataaacggc tcaaccgccg atttataagt accgacacgg
    11461 aaaatatgcg gttcagcctc aattttatcg agcaaggttt tgaaataagt gttggaataa
    11521 tttaagcctt ttaaatccac cgcaccgact ttattgagat aaatttcatc agcaaaggaa
    11581 gcaagataat attgtttttg cgagtagtct tcgcccactg caatcaccgg cttgcccgat
    11641 tgtttgaagt tgttgatttc attgccgata aaatccaatg agctgaaatc agcactttgt
    11701 agcttttgca gatctaacac caagccggta attttcgggt catttttagc gtggctaatc
    11761 gcttgcacca catcaaaagt cgagatttta aacggctcgg aactacctaa ttccgattgc
    11821 accaagcggt agaaatcagt gaattcttcc cgattatctg ctaaataacc atctaaattt
    11881 aaacgtaacg ccccttgatt gaacaccggc ttttgcgtgc tgccagaaga gctgataaat
    11941 gcgaccaccg gcactaatag caaaataaac agaataaaaa agagattaat gacacactct
    12001 ctaatacaac ggaagattcg gtaaaatgct tttaaaatcg ttaacatcgg aaattcctaa
    12061 aaataaactc agtcggcaca gtataaagca atcgctaaat gaagaaaata tgctattctt
    12121 gaacgcaaaa aattaacaaa ggaacgctta tgcaaatctt ggatttatta caccatcgcc
    12181 gttcaaataa aaaatttggc gataaagccc cgaatgcaga acaactggaa caaattctaa
    12241 aagccggctt gcgagtgccg gatcacgggc ggttaaagcc ttatcgcttt gtggtgattg
    12301 aaaaaagcgg tatgccacag tttggtgaat gcttaaagtc tgcggtagca gaatttgata
    12361 tgggcgagga acgcttaaaa aaagcggaaa aattagctaa tcaagctcca atgattatcg
    12421 gcgtggtagc aacattagac gacagcatcg ccaaagtgcc aagttgggaa caaatgatta
    12481 ccgcaggctg tgcaacttat gcgattcagt tagcggcaaa tgcacagggc tttgatacgg
    12541 tttggatcac caataaatgg attaacggct ctgctcttcg ctccgctttt ggttgccaag
    12601 aatctgataa aatcattgcc ttaattatgc ttggctcacc ggcagagggc gagcaaattg
    12661 cattagcccc tgaaagtgaa agtttagagg ggtttgtacg ttatcttaag taagcaggtt
    12721 aacagataaa agttagtaat aagggcgaaa aatatttcgc ccttgctttt atctgttttc
    12781 gccttacttc ttccagcctt ttaacgcatc ggcaaaggca ttgttaccaa aagcgttgcg
    12841 attgttgctt tgcaagcggt catttttctg cgtatttttg caaatttctg ctgaatttcg
    12901 accgcttgtt ggctcttttt tatcggttgg tttgtcgtct aaacgcatcg taagggcaat
    12961 acgtttgcgg gcagcgtcca cctcaagcac tttgactttc accacatcac cagctttcac
    13021 taccgtgtgc ggatcttcaa caaaagagtt tgagagcatt gaaatatgca ccaagccatc
    13081 ttggtgtacg ccaatatcga caaaagcccc aaagtttgcc acattggtca ctgtgccctc
    13141 caaaatcata ccggctttga ggtcggtaat ttcttccacg ccgtccataa acacggcggt
    13201 tttaaactct ccacgagggt cacgccccgg tttttctaac tctttgaaaa tatcgttcac
    13261 cgttggtaaa ccaaactgct catccacaaa atctttggcg ttgagcgagt gaattttgct
    13321 gttgttaccc attaattctg caagtgttga ggtagttgcc tgtaagattt tttctaccac
    13381 cgggtaagct tccgggtgaa cgcttgaggc atcaagggca tttttcccac cgataattcg
    13441 cataaaaccg gcacactgtt caaaggcttt cggccctaaa cgaggcactt ttttcagctc
    13501 tgagcggctg gtaaaacggc cgttttcgtc acggaatgcc acgatatttt gtgccaatgt
    13561 tttggtcatt cccgccaccc gagccagcaa cggagcggag gctgtattca gatccacgcc
    13621 cactgcgttt acacaatctt ctactaccgc atcgagttta cgggcaagtt gggattggtt
    13681 tacatcgtgt tgatactgcc caacaccaat cgcttttggt tcgattttca ccaactcggc
    13741 aagtggatct tgcaaacggc gggcaatcga aaccgctccc cgtaatgaaa cgtctaaatt
    13801 tggaaactcg ttagccgcaa attcagaggc agaatagacc gatgccccag cctcactcac
    13861 caccaccgtt tgcggtttat tctctttgat ttctttaatc accgctttgg caaaacgttc
    13921 ggtttcacga gaggccgtac cgttaccaat cgcaatcagt tccacattgt gttgtttgat
    13981 taagctgaaa atcgcaagct gtgcctccgc ctctcgccca gtgtgagggt aaattgtggc
    14041 ggtatccagc aatttaccgg tgttatccac caccgccact ttcacgccgg tacgcaagcc
    14101 cgggtctagc cccattgtat ttctcgcacc ggcaggggct gccattaata atgccgagag
    14161 attgcgggca aacacatcaa tcgcctcttc ttcagctttt tcacacaggg ttgccattaa
    14221 ttcggtttct aaatgcagag ctgctttgat tttccacgtc caagcaatca cttgctcacg
    14281 ccatttatct gctggttgat tattaaaaat cacgcccaaa tgctcacgaa taatttcttc
    14341 acaatggctg gattttgtgc cttcttctgc agtcggatcg gcatttaatg aaagtgataa
    14401 caccccttca tttcgcccac ggaacatcgc caaagcacgg tgggaaggca cgctgttaaa
    14461 cggctcgcta tgagcaaaat aatcacggaa tttctcgccc tcttcctctt tgccgtcaat
    14521 cactttcgat tccaacgtgg cgtaagcggt caaatattgg cgaagttttg caagtagctc
    14581 agcatcttcg ctaaaacgct ccattaaaat atatcttgcc ccgtctaatg cggccttggt
    14641 atccgcaacg cctttttccg catcaacaaa gtttgccgct aaggtttcag gatcttgttt
    14701 cggatcattc cataaactgt ccgccaatgg ctctaaccct gcttcaatcg caatttgccc
    14761 tctggtgcga cgttttggtt tatacggcaa atagagatct tccagctcgg tcttgctttc
    14821 actgcttaga attttggctt ttaattcatc ggttaatttg ccttgttctt caatcgactt
    14881 caaaatggtt tggcggcgtt cgtccatttc acgcaaataa attaagcggg tttcaaaatg
    14941 gcgaagttgg gtgtcgtcta gcccgccggt cacttcttta cggtaacgag caataaatgg
    15001 aatggtattg ccctcaccta atagcgtgat ggctgcaaga atttggtgtg agccaacgtt
    15061 gagttcgccg gcaataattt ggctgatttt tagatttaag tcagtcatta gttttccttc
    15121 aataaatttg ctcgaggttt atccaatttc tcaagctcgg tcaatgtttc ggcaattttt
    15181 tgcagattcg gctctttttt cgcacataac accatatttt ctaagctatc cgcttggtga
    15241 tagtagggtg ctttgctttt gacagcctgc tcaaattgct gataagcctg ttgaaattga
    15301 ccctgtttac ataaaaaagt gccgtaatta ttcagcacat cagggcggtt ttgactcaat
    15361 ttcagtgccg tttggtaggc tttttcggca ttttcagcat cacctgtttg ttggtaataa
    15421 taggcaagca ccgaataagg gaggtaatct ttttcatcgt gagccaaggc tttatcaata
    15481 ttctgcttag cttttgggaa atcattttgc tccagataag ctaaagccaa attaatacgg
    15541 gcttttaccg cttccgagcg gttaaattcg acttcagagg aagaaggggg aagagaagaa
    15601 caagccgcta ataaaaaaat cagaatacaa gcggtcattt ttggaaaaaa ttttgcaaac
    15661 ataacgttct cctacaacaa agggcttaat tttactgttc catcctcgct aagactagcg
    15721 attttttgcg aagaagaaaa atttttcgtt ttcatttttc gacgcagatc gcaaaaataa
    15781 taatggggtg ttgtgctagg gtaaatggta ggaatacact ctctatttaa tataagaatt
    15841 tcattgaaaa aacttataaa acttataaaa tagaggcaaa aatgaaaata gtggtattcc
    15901 agcgtaaagc cttaaagcaa ttacgaaaaa tcccaactgg tgcagaaatt cgccgaaaat
    15961 gtgatgattt agcttacttt ccctactgtg ccaatattaa ggcattaaca aatcatcaat
    16021 atgattatcg ctttcgggtc ggaaattacc gtattttttt caatattgaa ggcgaaacga
    16081 tgaatattgt gtctatcgaa gaggttaaaa aacgagatga aagaacttac taatattcaa
    16141 tatttaaata atgaagaagg aaaacctgcc tttgccgtac ttccgatagc aacacttgaa
    16201 tggcttaagc agaaagcaaa tattaaaacc gcaatagaga ccggtattcc atctgctgtt
    16261 gctggaattg cattagataa taactactca gctctgcgtg cttggcggga atatttaggt
    16321 ttaactcaag aagaggtggc acaacgcttg gggatttcgc aatcagctta tagccaacac
    16381 gaaaatgcaa aaaatctacg aaaaacgacc cgcataaaaa ttgcctatgc gttgggttta
    16441 aatgaagagc aattagattt ctaataacaa aaaggcagga acctctgcct tttcactatt
    16501 cagattaatg ggttttaacc gcaatacctt gcccgaattt acgtttttca agggtgcgtt
    16561 tggtgcggtc aatcacatcg ccagcaagct gtccgcaagc ggcatcaata tcatcacctc
    16621 gtgttttacg cactgttacc gtgaaaccgt actccatcaa ggttttttgg aaacgatcta
    16681 cccgagagtt agagctttta ccataaggag cttctgggaa cgggttccac ggaatcaagt
    16741 taattttaca cggcgtgttt tttaatactt cagcaagttg gtgggcgtgg tttgtgctgt
    16801 cattgacatg atctaacatc acatattcaa tcgtgacctt gccgtggttg gcgttagaaa
    16861 cttcacggta tttattcacc gaatccatca acattttgat gttgtacttt ttattaatcg
    16921 gcactaattc atcacgcagt tcatcgttcg gagcgtgaag tgaaattgcc aacgccacat
    16981 caatttgctc acgcattttg tctaatgccg gcaccacacc cgaagtggaa agcgtgacac
    17041 gacgtttaga taagccgtaa gcaaaatcat ctaacatgat ttccattgcc ggaatcacgt
    17101 tattcatatt cagcaatggt tcacccattc ccatcatgac cacattggta atcgggcgaa
    17161 caccggtcac gccaaaattg ccgataattt tagaagcacg ccacacttgc ccgataattt
    17221 ccgccacgct taagttacgg ttaaagcctt gttgagcggt tgagcagaag gtacaagcca
    17281 aggcacagcc tacttgtgaa gaaacacaca gggttgcacg gtcatcttca ggaatatata
    17341 ccgtctcgat ttgctgatcg cccacttgca ttgcccattt aatcgtaccg tctgcagaac
    17401 gttgttctac cgccacttca ggggctttaa tttcggcaat acgctttaat ttttcacgca
    17461 atactttatt gatattgctc atattatcga aattttcttc gccaaaatgg tagatccatt
    17521 tcattagctg gtcggcacgg aaaggttttt cccccatttc tgcaaacagt tctcgcattt
    17581 cttgacgatt aagatttaat aaattgattt tttcttttgg ttgttcagca gacccacagc
    17641 ctgcattggt aatcagttct gacataaagt tgaaagcctc gttattacac ggattacggc
    17701 aaaaggttag ggcaaatgcc cttattttgc gattggattt taaagcgtgc aattttactg
    17761 gctcttgagg gattaggcta gtaattttta atcaaaagag ttgaattgcc tgagtaaact
    17821 tatcaagaat aaccttataa aaacaagact atttacatca ttcccaatgt tctatagaat
    17881 agctttcgat aattctcatt ctcaataaca aaaggaggct aaaaatgaaa ctatcaacaa
    17941 ttaaaaaagc attggtatta acctttggtt taagtgcagc gatggcaatg gcagagccgt
    18001 ttaaagtagt taccactttt accgtgattc aagatattgc acaaaatgtc gccggcgata
    18061 aagccactgt ggaatccatt actaaaccgg gtgctgaaat tcacgattat caaccaacac
    18121 caaaagacat tgtaaaagct caaaaggcag acttagtgtt atggaacggt atgaaccttg
    18181 agcgttggtt tgaacgtttc tttgaaaatg taaaaggtaa accggcggtt gtcgtcaccg
    18241 aaggcatcac cccaatgccg attaccgaag gtgaatataa aaatctacca aatccgcacg
    18301 cttggatgtc caccgataac gcattaattt acattgaaaa tattcgtgcg gctttagtaa
    18361 aatatgaccc acaaaacgca gacacctata atgccaatgc aaaagcctat gctgaaaaag
    18421 taaaaggtat tgctgagcca ctccgccaac gtttagcttt tattcctgag cagcaacgtt
    18481 ggttagtaac cagtgaaggg gcatttagct atttagcgaa agactacaac ttaaaagaac
    18541 tttatttatg ggcaatcaat gcggaagagc aaggttcgcc aaaacaagtg aaaaaagtga
    18601 ttgatggtgt aaaagccaac aaaatccctg ttgtgtttag cgaaagtacc gtttccgaca
    18661 aaccggcaaa acaagtggcg aaagaaaccg gtgcattata cggtggcgta atttatgtgg
    18721 attcactttc agagaaagat ggtccggttc caacctattt agatttgctt aaagtgacta
    18781 tcggcaccat tgtcgaaggg ttcgaacgaa gcaaaaaata ataagattta gcaatgacaa
    18841 ctgtttcagc ctccatttcc gtcgaaaatt tatcggtccg ttataataac ggacatatcg
    18901 ctttgcaaga tgtctcgttt catctggaaa acggcacaat ttgtgcatta atcggcgtga
    18961 atggaggtgg aaaatccact ctgtttaaaa gtttaatggg gctggttaag ccattaaccg
    19021 gctctgttaa gctgagtcag ctcccgattg ctaaagccct caaacaaaat ttggtttcct
    19081 atgtgccaca aagtgaagaa gtggactggc aatttccagt ttcggtttac gatgtggtaa
    19141 tgatggggcg atacggctat atgaattttc tacgccgccc aagccaaacc gataagctca
    19201 aagtagagca agcaatgcaa cgccttgatg ttttacatct caaagacagg caaatcggcg
    19261 aactttccgg cgggcaaaaa aaacgggtat ttttagcccg tgccttagct caagaaagta
    19321 aaatcatctt acttgatgag cctttcaccg gtgtggatgt taaaaccgaa aatgcgattg
    19381 ttgagctact taaacagctt aaaaatgagg ggcatttgat tttagtttcc acccacaacc
    19441 ttgccagcgt accaagcttt tgcgatcagg ttttgatggt caatcgcacg ctactggcaa
    19501 aaggtaaaac ggaagaaatc tttaataatc aaaatttaga acgggtgttc ggcggtttat
    19561 tgcattatca aaagtagtgt ttcagcaaca aatcacaaac aaatagggag gcaaatgcct
    19621 ccctattttt gtatcaatga atcttagaat atgcaaaact gaggaaaaaa atggccgctt
    19681 gcacgagaat aatcgtcggc cctgttgcgg catcaatatg gtagctaagc aacgtgccga
    19741 ataccgatga aaatatcgca acgcctaagg caatcagtaa catactatca aaccgcttag
    19801 tcagcaggta agcagtgatc cccggggtaa tcaacattgc caccactaaa atcacgccca
    19861 ccacttgcat tgcactgata atagttaaag caagcaagga aagtaaacca taatgcaata
    19921 atctaaccgg taagcctgct actttggctt gattaacatc aaagcaatag agcaagaagt
    19981 ctttgcgttt cgccaccatc accacaaagg taaagaggct tatgagtaaa gtctgaagca
    20041 aatcgctttt ggttacgcct aatagattac caaataaaat atgggttaaa tgctcaccgg
    20101 tattaaaggc ggtaaacagc aagatcccaa aggcaaacat acctgaaaac acaatcccca
    20161 ttaccgtgtc ttctttcaag cgactatttt cttttaaata gcccaccgat aaggcacagc
    20221 ctaatcctga aaaaaacgcc cctattgaga gtggtaaccc ggcaagtgag gaaatcacca
    20281 caccgggcag aacagcgtgc gaaattgcat cgcccattaa agaccagcct ttcagcacca
    20341 gatagcaaga taaaaccgca ctcacgccag caactaaaat tgcggtaatt aacgcaattt
    20401 gcataaattc aaattgcaac ggctctaaaa tccaattaag cattttgaac ctccacacgg
    20461 tgcaatttcc gcttttgagt aatcaagcca tatttaggag caaagcagaa tgcgaataag
    20521 aaaattaagg tttgtaagca cacaattacc gcaccggttg caccgtctaa aaagtagctt
    20581 aaatatgccc caatccctga tgtcagcgtg ccgataagca ttgcgatcag cactaatcta
    20641 gggaaacggt cggtaagtaa ataagcagtt gctcccggcg tgacgaccat cgcaataacc
    20701 aaaattgccc caaccgtttg cagagccact actacacagg cacttaataa ggtaaagaaa
    20761 atcactttat agcgtaatgg cgaaagcccg actgacaatg cgtggtgttc gtcaaaaaag
    20821 acgagtagca aatccttcca aaataggatt aaacccagta acgaaatcgc aataatcagt
    20881 accacctgcc acaagtcatc atcagcaatg cctaaaatat ttcccattac aatcgaatta
    20941 acatcaaccg atgttggatt gagggaaaca ataaacatac caagcgcaaa aaaagtcgtg
    21001 aaaataaagc cgataaccgc atcttcttta attttcgtca ggctttttac ccaaagaatc
    21061 gataatgccg ccaaaatccc ggaaaaaaac gcaccaaagg cgtagggcaa ttttagtgca
    21121 taagcgatgg caacacctgg cactacagcg tgtgataagg catcaccaat caaagaccag
    21181 ccttttaaca tcaaaaaggc ggaaagaaaa gcacaaacta accccacgcc catactgaca
    21241 aaaatcgctt tttgcatata gttgtaggta aaaggctcta ataaaagatc aagcataaaa
    21301 tcctaacaag ttgttgataa tagttcgcat atactatcat ataaactcct tttcttgtat
    21361 ggattaaact taaatatcta ctttaaattg ataaggatca ggatagtaat aacgaaaacc
    21421 aagctcttgg caaattttgt ctgcttttat cagccttaca agcggttgat tttcttcaga
    21481 aaaatgcaaa tccgctaacc caaaacgttt tgccatttca ctataataat ctttacggct
    21541 tgggtgctgt tcggcacata aatgaaaaat acgctgcccg ttcggctgct ccaacagcaa
    21601 tgaaatggct gcaatacagt cctctaaatg cactaaattg accggctgcc ctgctccact
    21661 caagttctgt tttcccgcca aataaaaaac cgggtgccgt tttttgccca ccaagccagc
    21721 taaacgcaaa atatcacaat gaattggctg gctcagcaac caattttcca tttttactaa
    21781 taggttagca gaatcaacca ctgcattttc atcaaaaacg cccgatttca ttggcaaaac
    21841 cgaagtcgag ctggtgaaaa ccagatgttt caagcccttt tctattgcaa gcgaaactaa
    21901 tgtttgaata ccgcaaccgt aattttcagg gcgaatttgg ctaaggggca aggcaatcac
    21961 taacgcatca gcagcaagta attgctcgat ttcgcttgtc actgctaacg catttaaatc
    22021 tagaggataa cattctatcg ctaattctcc gaccgttcgc ttagtacctg caacacgcca
    22081 gcccttattt tgtaatgctt cagctaaagg tagtccgagc cagccaagcc ctaaaatggt
    22141 aatttttttc atcatttacg tttctcaaga ttaaaattgg aatgagggga aattcaggta
    22201 caaaaaaagc acctcgtggt gctatctatt ttatttctag attggagcgg gaaacgaggc
    22261 tcgaactcgc gaccccgacc ttggcaaggt cgtgctctac caactgagct attcccgcaa
    22321 attttaaatt gttgattttc taaatggtgc ccgaggccag acttgaactg gcacgccccg
    22381 aaaggcgagg gattttaaat cccttgcgtc taccgattcc gccactcggg cagcacgata
    22441 tagaaaaatt ggagcgggaa acgaggctcg aactcgcgac cccgaccttg gcaaggtcgt
    22501 gctctaccaa ctgagctatt cccgcattta aaaacgctac gaacctcgta gagtctcaac
    22561 aggtgcatat tctatggatt tcagatttaa tgtcaaataa atttgtagga aatctgtaaa
    22621 aaatcgttta attggtgaaa aataacgctt tttgcaaatt tttcatcaaa tttgaccgct
    22681 tgcagccgcc ttatttgttg aaatcataat cagcaaattt ccgacaaata tcaattacaa
    22741 cttttgtggc tttttccatc gtatcaaccg aaataaactc aaatcgtccg tggaaatttt
    22801 cgccgccggt aaataaattc gggcaaggca agcccataaa tgaaaggcgt gagccatcag
    22861 taccgccacg gatcggttct aaattcggct caatgccttg ttcacgcatt gcgttttcgg
    22921 caatttcaac caagtagccg taatcgtcca gcacttcacg catattgcga tattgctcga
    22981 caatctcgac ttttccgcaa tgttcgccgt aaatctgttg catctctgcc agcgtatcat
    23041 tcagcatttt gccgaatgca gctaattcat cacgctcaaa gctacgtaaa atatagtgaa
    23101 tttccgcttt atcaattcca ccctcaatgc cgtgcaacat aataaagcct tcacgccctt
    23161 cgctggtggc aggggttaaa tggggaggca gacggtgttg gaactcgcaa gctcgctcta
    23221 aggcgttgat catcttgccc tttgccgtgc cggggtgaac gctacgcccg aagaacgtaa
    23281 cggtcgctgc atcggcattg aaattttcat attgcaattc gcccagaggc ccgccatcaa
    23341 aggtaaaggc gacatcggca ccgaatgcgt ttacatcaaa atgatctgcg cctcgaccga
    23401 tctcttcatc ggtggtaaag ccgatgcgga tcttgccgtg cggaatatgc ggattggctt
    23461 gtaaatactc gatagccgag agaataatcg caatgccgga tttgtcgtct gcgccaagca
    23521 aagaggtgcc gtcagtggtg actaaggtgt cgccaatcag cttgtttaaa ttcgggaaat
    23581 ccgttggcga aagataatcg ccactgccgt ttagcaaaat attgccgcct tgataagcct
    23641 caatcacctg tggtttcacg ttttcaccat taaaatcggg cgaagtatca acgtgggcaa
    23701 tcagcccaag caccggcagg gttttgtcaa tattggcagg caagctggcg aacagatagc
    23761 cgttggggtc aagataaatc tcgcttagcc ccatcgcctc tacttccgtt ttcagcagat
    23821 gaagcaaatc ccactgctgt tgcgagcttg gcacagtttg gcttttcgga tctgaagttg
    23881 tgtgaatttg ggtgtaacgt agtaaacggt taagaaggga ttgtttcatt gtttttcctt
    23941 actatagttt agtgtaacca attctccaat ttcagatcag gtaccatttt aaatgcctga
    24001 tcactagaaa ctaaaataca ctcttcagca agagcgtgac tagcaatcat ttgatcctgc
    24061 acgcccatta ctttgccatt tttctccatc tctgcccgta actttccata aagttcagca
    24121 caacgataat tccaatctaa aacctttaca ctcgataaaa aataatctaa aaattgagaa
    24181 agctgcccat tatttctttt cgccacacca taaaccaatt cagcagcagt tacagatgaa
    24241 atacaaagcc tctcaggatt aatggacttc aatttcgcca ccacatttgc atttccacga
    24301 aaaaaatagc ttacagtatt cgtatctaac atatacattt aagctacctc aaaaggatcc
    24361 cgttgctcaa aggattggtt tctctctttt gtatctaaaa atgtttcatc acatacaaca
    24421 gcaggcaata gctcaaacaa tcgttgccaa tgctcggtat ttctcgatct caatgataat
    24481 aaaatatcgc cattttcttt tttagaaaca tagacttgct ctgcatcaaa ctcaaattca
    24541 accggtaaac gcactgcttg gttccgcccg ttacggaata atctcgcaat tttttccatc
    24601 ttactttacc ctccgataga tagtgtatat gccaaagtat atgcctattt tatacaactg
    24661 gcaagataac ccattctcaa atactcaata acatactgat ttcaaatcat aatattacca
    24721 actaatagtc ggtttacgtt tctgctcaac gcaatctttc aaataaagat tgatcaacgt
    24781 ttggtaaggc aaattcacct cttcggcaag ttgtttaaaa tagctgataa catcgtcttc
    24841 aatccgaata gtaaccacac ttttgctttt tagccctttt gcgtaagggt ttttcactgc
    24901 attagaaaaa tcgtattcat ctctcattta atgtactcct ttatattgcc cactttcgcg
    24961 ttttgttgcc aaacgtgctg aaataatccg aatgttggta tttctctcgc aatgcacaac
    25021 cacaagtaga ttatctttat tgctacgccc gagtagcaaa aaacgctctt ccctagatga
    25081 gtgatctgga tccgggatta acatcgcatt attatcataa aatacgctta ccgcctcgat
    25141 aaaactaact ccgtgttttt gttgattacg aagagctttc tcactatccc attcaaaacc
    25201 attaatttct tccattgcca gtttactcct ttttaattgt aaataaaata tatttacatc
    25261 tattttttta agttataaac agcctagatg aaattactgg attcgcaata aacaaaaacg
    25321 atttttacga tacagatcgc aaaaatcgtt tttcaagatt gacaacctta ggaggcttta
    25381 tccgcccaca acctccctta gcaaattttc cacaaattct aaccgcttgc ggttgtcttc
    25441 gagtgctaag cggaatttga acttcaccgc cccttcaaaa ctgtacaccg ctggttgttt
    25501 ttggattaag gcgataaact tcattgggtc gggctgggct gtcggtttaa attcaagata
    25561 accgccgtga atgccggcat cgattttctt aatcccgagc gtttgtgccg acaagcgaag
    25621 ttgggttatc gcaaacaggt ttttggttgc ctctgggagc aagccgaagc gatcgatcag
    25681 ctccactttc aagtcgttca ggctttgcag attttccgag cttgcgatcc gcttgtagaa
    25741 cgacagacgc atattcacgt caggcagata atcgtccggc aataaggccg gtacacgcaa
    25801 ttcaatctcc gcttggtgtt gggtgatttc atcgaggctc ggttctcgcc cttcttgcaa
    25861 agctttgacc gcattttcga gcaagtccat atagagcgaa aaaccgatgc tttcaatctg
    25921 tccgctctgc tccgaaccga gcaattcgcc tgcaccacga atttctaaat cgtgggtcgc
    25981 caacgcaaaa ccggccccga gattatcaat ggtactcatc gcctccaagc gttgctcggc
    26041 atctttggtg agcgttttcg ggtgcggtgt gagcatatag gcgtaggctt ggtggtgcga
    26101 gcgtccgacc cgtccacgca gttggtgcag ttgtgccagc ccgaatttgt ccgcccgttc
    26161 gataataatg gtattggcag tcggcacgtc aatccccgtt tcaataatgg tggagcaaac
    26221 cagcaggtta aagcgttgat gatagaaatc gctcatcacc cgctccaatt cacgctcacg
    26281 catctgcccg tgtccgatca caattcttgc ctctggcacg agttcagcca atttctcggc
    26341 acaattttca atggttgcca catcgttatg gaggtagtaa acctgcccac cacgcagaat
    26401 ttcacgcaaa attgcctcac ggattaccat ttcatcactt tgtcgcacaa aggttttgat
    26461 taaaagtcgg cgagccggcg ggctggcgat aatcgagaga tcacgcattc cgttgagtgc
    26521 catattcagc gttcttggaa ttggcgtggc ggtgagggtc agaatatcca cattggcacg
    26581 cagttgtttg attttctctt tttggcgtac gccgaaacgg tgttcttcat caatcactaa
    26641 aagcccaaga tcacggaacg ctacatcgtc ttgcaacagt ttgtgcgtgc cgaccaaaat
    26701 atccactttg ccctccgcca cattttgcaa aatcgttttc tgctctttgg cggttttaaa
    26761 gcgagacagc acttccacat tcacagggta attggcgaaa cggtctttga aattctcata
    26821 atgctgttgg gcgagcaagg tagttggggc aagaataacc acctgtttat ggttcatcac
    26881 tgccaagaaa gtcgctcgaa tggccacttc ggttttgccg aagccgacat cgccacacac
    26941 caatctatcc atcgctttgg cttggcacat atcgctaatt acggcattga tggcaatttt
    27001 ctgatcgtcc gtttcctcat aagggaaagt ggcactaaac tgatcaaatt ccgctttatc
    27061 gtaggcaaac gcaaaaccgg tttggctttc tcgtttggca taaacatcaa gcaattctgc
    27121 cgccacatca cggatttttt ccgctgcttt ttggcgggtt ttcgcccacg cttcactgcc
    27181 taatttatgt agcggcgcag tttcatccgc cccaccgata taacggctga ttaaatggag
    27241 cgaggcaacc ggcacataga gtttggcatc gttagcataa tgtagcacga gatattcggc
    27301 tttgatccca ccagcgtcca gcacggttaa gccaccgtaa cgccccacgc cgttttccaa
    27361 atgcaccacc gcctgtccga ttttgagttc tgctaaatta cggattaagg tatcaggatt
    27421 gacggctttg cggtttttct cacgccgtgt ttgcacacgt tcgcccagca ggtcggtttc
    27481 gcagatgatg gcaaggttgc gggcgggcac aggacccgcc cctacgtagt tattatcatt
    27541 ttcgccattt gtatttaatt catcatcgta gggacgggtc ccgtgcccgc ccgtttccac
    27601 cacaaaccct tgatcaagcg gtgaaataat cagggaaaat ggcaaacctt gtgcttcatc
    27661 taatgaattg acctgcttcg gcttcacccc aagcggagca agcaaatcca gcaaggtttc
    27721 tcttcgccct tcgctctcca ccgaaaacag aatgttgccg tcaaattttt ggcggaattg
    27781 ctggaaagca gaaaacggct ctttggcaga ggattgaata gcaatatccg gcaagttagc
    27841 cacatttgca ttcattttcg ctgctgattt acggattttc tccgaagtta tcgttaaacg
    27901 gggatagcct ttcagccagc gatttacctc atcaatcgca aaccagagat cactcggcgg
    27961 cagtagcggt cgcatcggat ccactcggtg gctttcatag cggttttggg tatcttggtg
    28021 aaattgttca gctttttgct gaatatcggc gaaagtgata aacagcgttt gggcagggaa
    28081 atagtcaaac agacttgcca tttcctcaaa aaacaacggc tgccaatact caatccctgc
    28141 atttaaaatg cctttgctga cttgctgata aatatgctcc ggctcacggc ggatttcacc
    28201 gaatttttca cggaatttgg ctctaaaatg ctcgatcccg ttgctatcag tcgggaactc
    28261 gtgtgccggc agtaaattaa tttcggcaat ttccgttttg gtgcgttggt tatccacatc
    28321 aaaagtgcgg atactgtcga tctcatcatc gaaaaaatcg aggcgaaacg gctcttctgc
    28381 tcccatcggg aataggtcta aaatcgagcc acgcacggcg tattcaccat attccaacac
    28441 ctgttccacc gcccgatagc cggcattttc cagttgtaac cgcagttttt gaatcgaaaa
    28501 acggtcgcct tttttaatca acagcacatt gttagcgaga taattcggcg ggcagacctt
    28561 ctgcattaag gtgttgatcg gcaacagcaa aatctgctgt cgcccttgtt gcagttcaaa
    28621 cagggcagaa agtcgggcgg agataatgtc ttggtgcggc gaaaaattgt cataaggcaa
    28681 ggtttcccaa tcggggaaca gttgcactgg cagccctgca aactgaggca aggctttttc
    28741 caagcgtaac gccgtgcggg tgtcgggtgt gacaaccacc gtcaagccgt aaaaggctcg
    28801 ggcagcttgg ctgatcgcaa gggtatcgga atgcccgaca aggttaccga gggtttgatg
    28861 atcttgaaaa ttgccgtcag atttcggcag attaagtgaa attaaagaca tacaagcggt
    28921 ctgttttaaa taaaaaattg caaattgttg cttagtttac taaagcacgg ctgattgtgc
    28981 aaaataagcg gagaaattat gttatctaga tcgcattgcg aaaaaattct gataaaatgt
    29041 tccccttttt taactcttac tcacacatat tatgaaaaat aaaattttag gaagtgcatt
    29101 aatgattgca ggcactacca ttggtgcagg aatgcttgca atgccactca cctctgcagg
    29161 aatgggtttt ggggcaaccg cattactctt agtcggatta tgggctttat tggcctacac
    29221 cggtttatta tttatggaag tttatcaaac cgctccgcaa aaagatgttg gagtggcaag
    29281 ccttgccgag caatactttg gcttaatcgg gcgtgtatta gccactttca gtttgctcgt
    29341 actactttat gccctacttg cggcttatat taccggtggt ggttcactgt tagccggtgt
    29401 aatgcctgaa atggcagatg ctgatatgaa actgaaaatc agcattttaa tcttcactgc
    29461 ggtattaggt acatttgtgg tagtcggcgt gaaatcggtt gatggtttaa cccgagtact
    29521 gtttttggga aaaattgttg cttttattgc cgtgttgctg atgatgctgc ctaaagcgaa
    29581 gctggaaaac ttgacagcaa ttccattaga taacttactc attatttctg ctatacccat
    29641 tttcttcact gcgttcggtt tccacgttat tatgggaaca attaatagct atttagacgc
    29701 agatatcggc aaaattcgta aatctattta tatcgggacg gcaattccgc tagtggctta
    29761 tttattgtgg cagctcgcta cacacggggt attaagccaa aatgaattca ccacaatttt
    29821 gacacaagat ccgaccttaa acggcttggt gaaagccact agccagatta ccggtagtac
    29881 gattttaggc gaaatggttc gcttattctc agtgcttgca ttgattacct catttttagg
    29941 ggtttcgatg ggaatttttg aaggcgtggg cgatttgtta aaacgcttaa atctaccgac
    30001 taaccgttta tggctgacca tcgccacctt tacaccgcca attctgttcg ctttattcta
    30061 tccgaacggc tttattaagg cattaggtta cgccggttta ctctttgcgt tctatggtat
    30121 gattttacct atcggcttag cgtggaaagc acgtcgccaa tatccgaatt taccttaccg
    30181 tgtgattggt ggtaatttgg cattagtggt tgcgttaatt gccggtatta tcattatggt
    30241 cattccgttt ttaattcagg ctggctattt accgcaagcg gtaggctaat attgaaaagg
    30301 gctacgattc aatatcgtag ccctttctat aagttacaag cggtcatttt tcgatgactt
    30361 tttacagatt agccaatcaa ctgatacagc gccttaattt gatgctcttt taatgccccg
    30421 ccaattttct ctctgccgac aaaaatctta aacattgcgt tgcctttttt attaatgaaa
    30481 atcagtgaaa cagtacgttt tcccataaaa ggacgatcca acaaataaat tttggcacaa
    30541 ttttcgtagc gtagatgccc ttgtaagcct ccgccctctt tatgttcgaa attgtaaaat
    30601 ccacgagaaa ttgaaccgct tgggagcttt cccacaaact caataatggt atcttccgta
    30661 tgcgaaatca gcgtaatcgc atcgtcccat tcgtggattt gctgtagcac ttcggcaaaa
    30721 cgttcccctt cggttacttt tagcatttca gccggtaaat tcagcattac ctcttccagc
    30781 gtgcattgat attttgccgc taacatttct aaaatttgcc ccggattttc ggctaattca
    30841 ttgcgtaagg cggtttgttg ttcgattgat atcattaaat gttcctttaa gtaaagagag
    30901 tttcttagct ctctaagtaa atttgtaaat tagaaacggt attcaaaatt agccgagaag
    30961 ttacgtccag gttcataata gcgttgtaat ccaggatagc caccgtaagt tgcattttca
    31021 cgtactccaa cagaattaac gattccacct gttgtattta aaccacgtaa agtatcccaa
    31081 gtatggtatt tacggttaaa caaattataa ataccggcac gtaatgtaat attctcagtt
    31141 ggtttataga aaccgtataa atccacaaca aaggctttag catttaagtg cttccaggta
    31201 tctaaacctg tctcgtgaga atattcagta caacgaatgt catattcatc cccccaataa
    31261 gggtaatacg gatttggcgt tctatcctct ttaaggcatt tttccggtaa tgtttttaaa
    31321 tattttgcat ctttcgcctt tttagccccc aagaatgtga agcgagaaaa tactccccat
    31381 ttaccttcag gttgttcata atctaagcca actacggctt taatcggctg aatagaaagt
    31441 aaatctgccc cgttagacat actacctttg ctgtaaccga aggctccaaa tagcttccag
    31501 ccttcaggta ttggcatagc tgaatttaaa ttccatttac cactcacttc tagcccgtag
    31561 attttcgcag aatcaatatt ttgcatttgc tgtaccgggc gccaaaactc tctaccatat
    31621 gcttggtaaa catcccaggt ttcttgctcc cataaaaaat ctttatattt agtatggtgg
    31681 aaattaactg agagcagccc aacattgcca ctaccttgca aacttaaatt ttggcttaaa
    31741 ctacgttccg cttttaggtt tggattggac atccaagctc ctgcagcatt atcacggtaa
    31801 tcaaaataca tttctgatgc atttggaata cggaagcctg tcccaatgtt atatcctact
    31861 ttccatgcct cagtcagatg tttttctaaa ccggtaaccc aagttagttg attaaatttc
    31921 gcattgtcag tttttacgca gttacgacaa acaagaccat tgagttcttg ttgttcatac
    31981 ttcgcccaat cataacgaat gcctagcgtt gcaatccaat catgcgttaa atcaatctta
    32041 tcgtgcaatg aaaaagtgtg ctgtttcgtt ttaattgggt acatcatcgt agaatcggga
    32101 gaatttaccc aaacaccgga taaataaacc gagtccttat gtaatacatc gaaatctctc
    32161 tctgcagtag aggctttgaa agatagctga tgagtccatt taccaaattc taatgcttgg
    32221 ctgtctaaac ggaaatttaa gcgtttcaat tcagtattaa aaatacgaat attattgtca
    32281 cttggttttc tttgtttagc agggctccag tctgttgcat cttcagcgcg tgtaccttca
    32341 tagttataag cagatgtttc agtatcttga taatctgcat ctatcttcgc tagagatatc
    32401 cattttgact ctgggaaata ctcataaaaa acatttactg tatcacgttt actacggtct
    32461 tccgcttcac gccaaaaaga agtaatagta acggctgaat cttcgataat ataattttta
    32521 ttattttgcc cactgtaaga aacaccaacg cggtgattat cattaaatcg ataagcaaat
    32581 ttggctaaat aattatgatg attatgagta gaatcatcag gagtttgttt actactgcgt
    32641 aaagagcgag tttgtagaga atcttcagga agtgtataac ctcctgcact tttcatttca
    32701 tgcccatggc gatttgaata aaccaatatc gcctcagctt tctcacctaa atatccaaca
    32761 ccgaatgtat tcaaccattc attattacga gtaccatatc ctgtgcgata aaaagcacca
    32821 aatttattac cgttacgaac aatatcataa ggctcaagcg tccgataatt aactccgccg
    32881 cctaaattac cactaccttg attgaaagaa tctgcacctt tagatacttc aatagtacga
    32941 gctaattccg gatctataga ttggcgagat gtatttaaat taccatagcg tttataaagg
    33001 gaattttctt ctgaatcagg aaaagcgaga caccatcaat acttattcct acacggttgt
    33061 cttccactcc acgaatagca aatccttttt gatgtctacc ttggttaaca atgccaacat
    33121 cagggctata acgaactaaa tctcgattat tttgaatcaa ctcttgctga attatctctt
    33181 tatttttctt ttctatagaa gccttcacat cttctttagc aacaacattt acttcagata
    33241 attccgctgt tgtttcttcc gcataggtag cttgtgaaga caaaatgcta ctaacgctta
    33301 aagccaatat agtcgggcac aattttttag actttattga ataagaggta aacaccatga
    33361 ttctccctag atagattttt aatatact
//
LOCUS       DANLTI010000010        32151 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.010, whole genome shotgun sequence.
ACCESSION   DANLTI010000010 DANLTI010000000
VERSION     DANLTI010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32151
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.010"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            39..323
                     /locus_tag="PXB09_000399"
     CDS             39..323
                     /locus_tag="PXB09_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232549.1"
                     /translation="MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEV
                     HICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD"
     gene            427..1470
                     /locus_tag="PXB09_000400"
     CDS             427..1470
                     /locus_tag="PXB09_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5232550.1"
                     /translation="MQPINIAIAGAGFSSRVFHIPFLKQDARFNIVKVYERTSNNAAE
                     WLPNAETVRDFNALLTPEVDLVLITTPNQTHYAMVKESLLAGKHVLVEKPLVATVAEA
                     EELAELAKRQGKVLYVYQNRRWDSHIATAKSLMEQNLLGELVDCEIRFDRYAKEKNVK
                     VWKESGELGTGLVYDLGVHLIDQALYLFGKPEAVYADVRYQHEGALVDDNFDIQLYYA
                     NGFKVVLKASRYAREPSPTFVLHGKLGSYLKQTPDNQEDLLKNGVQPIGKDWNIEEKE
                     NWGILHTEVEGNVVRQPYRNAEVSYQNLFDDLYQAIAHNAEPIIKLEDVIFVLKVIES
                     VFESAKLGQKIYL"
     gene            1710..2816
                     /locus_tag="PXB09_000401"
     CDS             1710..2816
                     /locus_tag="PXB09_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HDL5232551.1"
                     /translation="MNKLIASLVASSCATAFAAPVQQNNFHTTTHTYEFTQSYDLVVP
                     QGSKGTTNLWIPLPSDTDYQTVKSIEFEGSYKNAYITENNAYGAKTLFATWDTDAPKR
                     DLKVKMVIQTQDREPMAQGALANYQMPEKITYSVDVLEYLKPTAHIKTDGIVKEYADK
                     IVGNEQNPLKKAELIHKWIVDNMERDNSVLGCGDGDVEKILTTKVLKGKCTDINSVFV
                     ALARASNIPAREVFGIRLGQAVKMGQYSKTAFGSSKDGVANESGGQHCRAEFYLAGFG
                     WVPVDSADVAKMRLAEKKDVDDADVQAVSKYLFGNWEMNWVGFNHGRDFDLYPQPELT
                     PLNNFGYPYAEVGGDPLNSFEAKEFGYEFISKEL"
     gene            2791..3159
                     /locus_tag="PXB09_000402"
     CDS             2791..3159
                     /locus_tag="PXB09_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232552.1"
                     /translation="MNSSLKSYNHKFITMCVTAIVSAVTSTFCCIGPLVYLVFGISSP
                     WLMELNQLEFLQLPMLLISLAAFGYGFWLLNFSNKIICTKYFSRRTLVILYWVVSVVV
                     MFFLTYPYVLPYILEMWSGE"
     gene            3161..3469
                     /locus_tag="PXB09_000403"
     CDS             3161..3469
                     /locus_tag="PXB09_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5232553.1"
                     /translation="MKKYIATMLLAFGLVHSSYAQEKTAQIETKQAEKTVVLHIPEMY
                     CQLCVYLVNKELRAVEGVISTKASMKERKATVVVKESVDNQALIQAVGNLKYTAKVIE
                     "
     gene            3707..4261
                     /gene="srlA"
                     /locus_tag="PXB09_000404"
     CDS             3707..4261
                     /gene="srlA"
                     /locus_tag="PXB09_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725059.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates along with their translocation across the cell
                     membrane; the IIC domain forms the PTS system
                     translocation channel and contains the specific
                     substrate-binding site; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDL5232554.1"
                     /translation="MIEAITHGAEWFIGLFQKGGETLVGMINGILPLLISLLVVMNAL
                     IKFVGQDRIERLAQRSAGNPISRYLILPVIGTFVFCNPMTLSLGRFLPERYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAISYLLVGMFTNFFRGWI
                     TDFTTAFFEKRMGITLDREVHLSH"
     gene            4292..5293
                     /locus_tag="PXB09_000405"
     CDS             4292..5293
                     /locus_tag="PXB09_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDL5232555.1"
                     /translation="MSNKAIYIEKGNGGWGGPLTLPVVEGKKVLYMTGGTRPAIVNKL
                     VELTGWEAVDGFKEGEPPAEEIGIAIIDCGGVLRCGLYPKRRIPTINIHSTGKSGPLA
                     EFIVEDIYVSAVKENNIRLIDADGSVPVATEQAKPTSSTTATAKEYDSSKKITEQSDG
                     LLAKIGMGMGSVAALFFQAGRDTIDTVLKTILPFMAFVSALIGIIIASGLGDVIAHGL
                     TPLANSPIGLVTLALICSFPLLSPFLGPGAVIAQVIGVLVGTQIGLGNIPPHLALPAL
                     FAINAQAACDFIPVGLSMAEAKQDTVRVGVPSVLVSRFLTGAPTVLIAWAVSAFIYQ"
     gene            5338..5736
                     /gene="srlB"
                     /locus_tag="PXB09_000406"
                     /gene_synonym="gutB"
     CDS             5338..5736
                     /gene="srlB"
                     /locus_tag="PXB09_000406"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDL5232556.1"
                     /translation="MHRLSKRENIYMTIIYQTTFTKIGNFAQESLTDDMLITFKQGAP
                     ADLQDYCFIHNPSELSSPLEVGDIAEFDGVAYPITAVGSVASENLSALGHITFRFDGA
                     NDAEFPGSVHVIGTPPQGLTENSTLIIKRD"
     gene            5784..6572
                     /gene="srlD"
                     /locus_tag="PXB09_000407"
     CDS             5784..6572
                     /gene="srlD"
                     /locus_tag="PXB09_000407"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDL5232557.1"
                     /translation="MNNEKKVAIVVGGGQTLGAFLSEGLADAGYRVVVADLNGENAQK
                     VAADINAKQGEGNAIGVQVDAADEPSVEALAKATDTVFGRADVLVYSAGTAKASPIWD
                     FNLNDFDLSVKVNLTGYFLTAKHFSRLMIRDGIKGRIIQINSKSGKVGSKYNSGYSAA
                     KFGGVGLTQSLALDLADKGITVHSLMLGNLLKSPMFQSLIPQYAAKLGIPESEVEQVY
                     IDKVPLKRGCDYQDVLNVLKFYAGEEAAYCTGQSINITGGQVMF"
     gene            6741..7121
                     /gene="gutM"
                     /locus_tag="PXB09_000408"
     CDS             6741..7121
                     /gene="gutM"
                     /locus_tag="PXB09_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDL5232558.1"
                     /translation="MDSITLLIILAMIMWLLQAVLGWLQIKAFNQAFMEISKKGKVTV
                     GRNSGRFNPKSVIVLAFDDEKKVVDSLCMKGFSVFARPQKLASVIGLSLDQIVPEKIF
                     PSDKRSQFALKVAISSGYSCSDQK"
     gene            7184..7831
                     /gene="hxpB"
                     /locus_tag="PXB09_000409"
     CDS             7184..7831
                     /gene="hxpB"
                     /locus_tag="PXB09_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDL5232559.1"
                     /translation="MQINSVIFDMDGVMIDSEPQWAEAQIAVLADLGINITEQDCEQL
                     TRGKRIDELSDTWIKKFQLSVSNQALSEAILAHGCAAIEQHGKALTGLYELLDFLKSN
                     QIKLAVATSSPPVVIKAVFDRLKLWDYFPIRCSAMDEEYGKPHPAVYLSAVKKLGIEK
                     QECIVIEDSVTGLIAAKAANLTTFLVNTDYQNEKFSIADKRMASLLDVIEKLKQH"
     gene            7874..8671
                     /locus_tag="PXB09_000410"
     CDS             7874..8671
                     /locus_tag="PXB09_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor"
                     /protein_id="HDL5232560.1"
                     /translation="MKPFERRQQILAYLAQHGRTEVDVLADYFKLTGATIRKDLTSLE
                     EDKKVLRTYGSVVLIDEEILEREEKINKEDKDDKPLAQKTGINLQQKQAIGQKAAELI
                     NEGNSIIFDAGSTVLQMIPHLKAFDNLSLMTNSLTIFNEILKLNKSYNLLISGGTFRE
                     KSASFHGYFAESAFIGSNFDILFIGTDGLDLDVGLTTFNEVYKVSSLMCDAANKIVLL
                     ADSSKFGRKSPNIVCGLEKIHTIITDEGLSQEMREQIKAKGIELLVV"
     gene            8682..9617
                     /locus_tag="PXB09_000411"
     CDS             8682..9617
                     /locus_tag="PXB09_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDL5232561.1"
                     /translation="MNHLDSAKETLNLYAQQIITLNHRLSEEFNEVVNMILACQGRVV
                     VGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDD
                     VNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMA
                     LGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRDVMVRKVPTASLDTTFTECL
                     SVMNEGRMGVAVIMQDDKLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDT
                     EFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEFSS"
     gene            complement(9661..10211)
                     /locus_tag="PXB09_000412"
                     /pseudo
     CDS             complement(9661..10211)
                     /locus_tag="PXB09_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005752768.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            10513..12372
                     /locus_tag="PXB09_000413"
     CDS             10513..12372
                     /locus_tag="PXB09_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDL5232562.1"
                     /translation="MSNLKVKVQGFGRFLSNMVMPNIGAFIAWGFITALFIPTGWLPN
                     ETFAKLVGPMITYLLPLLIGYSGGKLVGGERGAVVGAITTMGIIVGSEIPMFLGAMIV
                     GPLGGWAIKTFDKAIDGKVKSGFEMLVNNFSVGIIGMILAMLSFAFIGGIVTQISAAL
                     GAGVGALVEAGLLPVTSIIVEPAKILFLNNAINHGVFTPLGTAQAQEVGKSILFLIEA
                     NPGPGFGILLAYMFFGRGTAKQTAGSASIIHFLGGIHEIYFPYVLMSPRLILAVIAGG
                     ATGVLTNSLLGGGLIAPASPGSIFAILAMTAPGAHFAVVASVILSCAVTFAIASILLK
                     TQKGEASLEDAQAQTQAMKAESKGVVNGNINKIYVACDAGMGSSAMGASMLRKKVQAA
                     GLNIEVQNLAINDLPQDAQLVITHKDLTARATQRVATAQHLSLTNFLDSAFYDSLVAK
                     LANHQPQQAVQNTQNFANPVEEPQAEGLKLQAAQVFLGLQANSKEEAIRFAGEQLVKA
                     GFVQPSYVDAMFAREQMVSTYLGEGLAVPHGTSDAKDSVLKTGIVVCQYPNGVRFTDE
                     EDGVAKLVVGIAAKGNDHIQILSAITNALDDEQAMKTLTSTNDVEKVLALLSK"
     gene            12476..13615
                     /locus_tag="PXB09_000414"
     CDS             12476..13615
                     /locus_tag="PXB09_000414"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDL5232563.1"
                     /translation="MNALHFGAGNIGRGFIGKLLADARIFVTFADINQTQIDQINQNK
                     QYGVKIVGDDSRVEIVKNIAAINSKDENAVIEQVKNTDLITTAVGPNVLGFIAPLFAK
                     ALVARVESGNTQPLNIIACENMVRGTTFFKGKIFEHLTAEQQAEIEKVVGFVDSAVDR
                     IVPPAEPNPADPLEVTVEEFSEWIVDQTQFKGDIPNIKGMELTDNLMAFVERKLFTLN
                     TGHLICAYLGKQAGVKWIKEAIAIEEIKTQVKATMEESGAVLIKRYGFDPQAHSAYIE
                     KILKRFANPYLNDDVNRVGREPIRKLSENDRLIKPLRGTLEYGLPYQNLVKGVVMALQ
                     YRNEEDPQAVELAEFIANHGVAAAVEKYTGLTDQAVIAQVVELYQ"
     gene            13627..14142
                     /locus_tag="PXB09_000415"
     CDS             13627..14142
                     /locus_tag="PXB09_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltR family transcriptional regulator"
                     /protein_id="HDL5232564.1"
                     /translation="MMDYIDKLSEETTLRGFLSIANQRFAKAVEQLIERVFRKTDFAL
                     KSVVDSLFEHQGPLADIEVRLKVLLGLGVISPKVFEDISLFLEVKQHLNEEEDEFAFS
                     HPAVVKFAKDLHHIDFLPINELLNMKASAANKDSMLFQMQQMRLEKMVRSSLILAVTE
                     IDEQLNVESPL"
     gene            14282..16147
                     /locus_tag="PXB09_000416"
     CDS             14282..16147
                     /locus_tag="PXB09_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDL5232565.1"
                     /translation="MQSLLSFVPDFLKQELFWVMALLVFAIWQFIQNKLRMDVVALIV
                     MLFFSLTNILSVKEVLAGLSDPNVVLIALLFIVGEGLVRTGVANQVSDWLMRVSGASE
                     TKVLVLLMLCIAGLGSFMSSTGIVAIFIPVVLAICSGMGISPRRLMMPLSVAGLISGM
                     MTLIATPPNLVAHSELVKSGFEGFNFFSFTPIGLIILVMGIGYMLIARRWLDNGEQSN
                     THSQAQKFSMSQLIEEYQLKERAKMVLVEADSDCVGKSIGQLNLRIEQGLNIIAIQRT
                     KRFRKITVSASVNEIFQPKDILLLDTALDDETYQQRCEQLKLRPIELKGEYFSSQYRS
                     VGMAEISVMPEAECIGKTIRELKFRSRYHLSIVGLKRGDEIIQEELLDTPLKFGDILL
                     VMGVWQQIHRMDDDHRDFFLLRDPAESKNAPPALSQAPHALFSVLTMVLLMITGIVPN
                     VMAALIACLMLGKFRCVDMKSAYDSIHMPSIVLIVGMMPFSIALQKTGGVDLTVRLLL
                     DAMQGLDVHFVLIVLFVVTAIISAFISNTATAILVMPIAIAIANQLGYSPAPFVMTVA
                     VSASAAFMTPVSSPVNTMVLAPAGYKFIDFVKVGVPFTVLVMLVSVFVIPMLFPL"
     gene            complement(16437..16688)
                     /locus_tag="PXB09_000417"
     CDS             complement(16437..16688)
                     /locus_tag="PXB09_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232566.1"
                     /translation="MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATV
                     IAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA"
     gene            complement(16700..17182)
                     /locus_tag="PXB09_000418"
     CDS             complement(16700..17182)
                     /locus_tag="PXB09_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5232567.1"
                     /translation="MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAW
                     EADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVV
                     VIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA
                     "
     gene            17366..17629
                     /locus_tag="PXB09_000419"
     CDS             17366..17629
                     /locus_tag="PXB09_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5232568.1"
                     /translation="MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSST
                     LKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR"
     gene            17645..18175
                     /locus_tag="PXB09_000420"
     CDS             17645..18175
                     /locus_tag="PXB09_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5232569.1"
                     /translation="MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKK
                     VGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREI
                     ADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIV
                     PIFSPIMPDFPLDSRD"
     gene            complement(18191..19318)
                     /locus_tag="PXB09_000421"
     CDS             complement(18191..19318)
                     /locus_tag="PXB09_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDL5232570.1"
                     /translation="MNKLKSINLQVYIMLIAIVVIMSFFSIATDGAYLSARNISNLLR
                     QTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFAAISNVWWGWPLSLTIIVTLILG
                     VMLGAWSGWWVAYQKVPSFIVTLAGMLAFRGVLVGLTNGTTVSPISNEMTTIGQGYLP
                     DMVGMILGTIGIFCFIVWGSYQRKARQKLNLTVPSMSKDTLKYGLVAIIVLGAIYLLN
                     DYRGVPFPVLVLVILAIAGTFLARKTAFGRHIYAIGGNIDAARLSGISVEKVKLAIFA
                     LNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGASLAGGIGSIYGVVIGAF
                     IIALLDNGMSMLDVPTFWQYIVKGGILLLAVWVDTISKKKA"
     gene            complement(19322..20836)
                     /gene="xylG"
                     /locus_tag="PXB09_000422"
     CDS             complement(19322..20836)
                     /gene="xylG"
                     /locus_tag="PXB09_000422"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDL5232571.1"
                     /translation="MAKLLEMKNITKKFGEVVALNNISISLETGEILSLCGENGSGKS
                     TLMKVLCGIYPAGDYEGEIYFSGEKLIARNIKDTEEKGISIIHQELTLVKNMSILENM
                     FLGNEITKSGITDDNEMYLRCKTLLEQVQLDIDPNTKVGELGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEKETEILLSLIKDLQAHNIACVYISHKLNEVKAISDKICVIRDG
                     EHIGTRSAEGMSEDDIITMMVGREITSLYPHEPHNIGEEVLRVENLTAWHPTNTHIKR
                     VDNANFVLRQGEILGIAGLVGSGRTEMAQCIFGSYQGKYQGDIFLHKQPIKIKNCAQA
                     IENHIVMVPEDRKKHGIIPIMGVGKNITLSSLPQFCFGKKVINEPLEETIINQSIAKL
                     KVKTSSPELAIGRLSGGNQQKAILAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ
                     LAKEGMAIIVISSELPEVLGISDRVLVMHQGKIKADLINQDLTQEKVMEAALKE"
     gene            complement(20903..21904)
                     /gene="xylF"
                     /locus_tag="PXB09_000423"
     CDS             complement(20903..21904)
                     /gene="xylF"
                     /locus_tag="PXB09_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5232572.1"
                     /translation="MKLKSKLLAIATATLMVLSNASVAKDLKIGMSIDDLRLERWQKD
                     RDIFVNKAESLGAKVFVQSANGDATAQISQIENMLNKDIDVLVIIPFNGEVLSNVIAE
                     AKKEGVKVLAYDRLINNADVDFYVSFDNEKVGELQAKSIIGQKPEGNYFLMGGSPVDN
                     NAKLFRKGQMKVLQPLIDSGKIKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVA
                     SNDATAGGAIQALSAQGLSSKVAISGQDADLAAIKRIIAGTQTMTVYKPITNLADKAA
                     EIAVALGKDEKVEMNAQLNNGMKEVPAYLLEPVVVTKENIDDTVIKDGFHTKDAVYK"
     gene            22146..23465
                     /gene="xylA"
                     /locus_tag="PXB09_000424"
     CDS             22146..23465
                     /gene="xylA"
                     /locus_tag="PXB09_000424"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDL5232573.1"
                     /translation="MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRL
                     AVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAKQKAEIAFEFFQKLGIPYYCFHD
                     VDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP
                     EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVE
                     HKHKIGFNGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTG
                     GFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQ
                     DLGLQILNGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR"
     gene            23618..25063
                     /gene="xylB"
                     /locus_tag="PXB09_000425"
     CDS             23618..25063
                     /gene="xylB"
                     /locus_tag="PXB09_000425"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDL5232574.1"
                     /translation="MYIGIDLGTSGVKVVLLDENQHIIAITQKSLPIFRPHPLWSEQN
                     PQDWWNATNEAMLELSATQDLQAVKAIGLTGQMHGATLLDNADNVLSPAILWNDGRSF
                     MECEELEQLVPNSREITGNLMMPGFTAPKLRWVDKHQPDIAEKVSKVLLPKDYLRLLM
                     SGEYASDMSDASGTMWLDVGKRNWNKSLLNACGLDIENMPKLFEGNQITGYLRPTLAE
                     QWKMKSVPIVAGGGDNAAGAIGIGLYQTGQAMLSLGTSGVYFVVSDKFQANPQKAVHS
                     FCHALPDRWHLMSVILSAASAVDWAVKSLGLKDVSTLFQQVEASQTASDAIFLPYLSG
                     ERTPHNDPYAKGVFWGLSHNDNQITMAKAVIEGVSFALAEGIEVLHETGVVADNIALI
                     GGGAKSVYWRQLLADISGKTFEYRTSGDVGPALGAAKLAQIALNPNQDIATFCQPLPL
                     EQVYQPTPARYAEYQQKRQKFTELYRRLKGL"
     gene            complement(25126..25449)
                     /locus_tag="PXB09_000426"
     CDS             complement(25126..25449)
                     /locus_tag="PXB09_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDL5232575.1"
                     /translation="MNVWILLAISICLEIAATNLLKLSNGFTKAIPTIGSLALYGLSF
                     YFLSIIFRTLPVGIVYAIWSGVGIVLTALVAYFAFGQKIDLAGLIGISLIIAGVLVIN
                     LFSKV"
     gene            25573..26115
                     /locus_tag="PXB09_000427"
     CDS             25573..26115
                     /locus_tag="PXB09_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDL5232576.1"
                     /translation="MAQVYIVHGYTANADKHWFPWLEQELAKCGVSCERLNMPDSAKP
                     SLDGWLNHLAQNVELTDQTVFVGHSLGCIAILNFLAKNYAKIKGAVFVSGFYQPVENL
                     PELSAFTNYYAILPSVSSFPSYVVSALDDKVVNHQYSDALAQHLHADYIRLNQGGHFL
                     DREGVTELPVVLELVKKLLE"
     gene            complement(26286..27110)
                     /gene="dapF"
                     /locus_tag="PXB09_000428"
     CDS             complement(26286..27110)
                     /gene="dapF"
                     /locus_tag="PXB09_000428"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDL5232577.1"
                     /translation="MQFSKMHGLGNDFMVVDGVTQNVYLTEEMIRTLSDRHRGIGFDQ
                     LLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDIHVSTAKG
                     KMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRTELQTVLCGVVSMGNPHC
                     VLQVDDVKTAPVNELGPLLESHERFPERANISFMQVVNRNHVKLRVYERGAGETQACG
                     SGACGTVAVGIMQGLLDNKVQVDLPGGTLIIEWQGVGHPLYMTGDATHIYDGFIKL"
     gene            27259..28581
                     /locus_tag="PXB09_000429"
     CDS             27259..28581
                     /locus_tag="PXB09_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5232578.1"
                     /translation="MSAMFIIQFAIVLLCILVGARVGGIGLGVFGGLGLAILSFGFGL
                     KPAGLPIDVMFMIMAVVSAAAAMQAAGGLDYMIKIATRILRKNPKYITFIAPLVTWTF
                     TVLAGTGHVAYSVLPVIAEVSRHNGIRPERPLSMAVIASQFAIVASPIAAAVVAVVAF
                     LEPQGVTLGNVLSVTIPATLLGLGLACVFVNKMGKELKDDPNYQRLLQDPEYVKENHI
                     TTNPTELPLKPTAKLSVGLFLFGALLVVLMGAIPALRPVFDGKPMGMAHTIEIVMLSI
                     GALIIFFCKPDGNEITKGSVFHAGMRAVIAIFGIAWLGDTLMQGHMDEVKSMVSGLVE
                     TAPWAFAFALFVLSVLVNSQGATVATLFPVAIAIGIPAPVLIGVFVAVNGYFFIPNYG
                     PIIASIDFDTTGTTRIGKYIFNHSFMLPGLLSMIFSIGFGLLLSNILL"
     gene            complement(28629..28988)
                     /locus_tag="PXB09_000430"
     CDS             complement(28629..28988)
                     /locus_tag="PXB09_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDL5232579.1"
                     /translation="MISIGAVLGAMCRWQLAVWLNPILSQFAFGTLAANWLGCLLIGI
                     AMGFNLGESQRLLFISGFLGSFTTFSSFSLELTEKLLAEKWGQFVTVLSLHLIGGLLL
                     TLIGVMLARAVTSGRFC"
     gene            29436..29624
                     /locus_tag="PXB09_000431"
     CDS             29436..29624
                     /locus_tag="PXB09_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232580.1"
                     /translation="MSYDANDALNEIEEALSELERVAEDLINNNPNKESELRGQGVHQ
                     ATKHLRFRIRNIRRGEAI"
     gene            29665..29967
                     /locus_tag="PXB09_000432"
     CDS             29665..29967
                     /locus_tag="PXB09_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232581.1"
                     /translation="MKIKLYFPDESIATIKRMGLRQMSPETLRWTADHPSSSYGMGAL
                     LRGKSGEILDGKSFAAMVHAFGAWIETDSEDTSRRVHNALVTAATGTEESVKVAKE"
     gene            29967..31277
                     /locus_tag="PXB09_000433"
     CDS             29967..31277
                     /locus_tag="PXB09_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDL5232582.1"
                     /translation="MSNILNWPDYKVLQVSELEHDYQVHAEVSEPPTQCPHCNHPEIV
                     GFGRRDEVIMDTPVHGRRTGIMLNRRRYRCQSCRKTFLEPVPHKDEKRQMTNRLIQYI
                     ERESLRRTFSSVAEDVGVDEKTVRNIFNDYCERLEKTLNFEMPQWLGIDEIHIIKPRC
                     VITNIQQQTIVDMLDNRNKTTVTRYLSKRTDRDLVRYVAMDMWRPYRQAVETMIPDAT
                     VIIDKFHVVRMANESLERARKAIRSALTPQQRRGLMRDRFVLLKRRHELTDAEYMRFS
                     GWTLNYPEIGQAYELKEAFFEIWDCQTRHQAQEAYYSWLRQITPEMKAHYDPLIKAMG
                     NWHDDIFAYFDHPITNAYTESLNNLIRVVNRVGRGYSFEALRAKILFTEGFQKIKKPR
                     YQRQRIPEGAMGRMPFYGVAEAGPSTNYGADISTLVREIEAGRL"
     gene            31274..32038
                     /locus_tag="PXB09_000434"
     CDS             31274..32038
                     /locus_tag="PXB09_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HDL5232583.1"
                     /translation="MALFQPCNPDTLLFFGAGCVAAAQVAGANFGLWEISIVWGLGVS
                     MAIYISAGISGAHLNPAVTIALAAFYGFEKHKILPYVIAQVAGAFCSVALIYFMYSDL
                     FTAAEAAQGITRGETVGFAGVFSTYPNPNITLVTAFIVEFVITVVLMSTILAIGDDKN
                     GLPNKALAALLIGLLIAVIGGATGPLTGFAMNPARDFGPKLFAYLAGWGEIALTGGKE
                     IPYFIIPIVAPICGALFGAWGYKNLIHNNLPANTQE"
     gene            32042..>32151
                     /locus_tag="PXB09_000435"
     CDS             32042..>32151
                     /locus_tag="PXB09_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232584.1"
                     /translation="MEKQYIIALDQGTTSSRAVLLDKNANVVEVAQREFT"
BASE COUNT         9181 a         6635 c         7097 g         9238 t
ORIGIN      
        1 ccgttctgat ttattataca ttttaaaagg agaaaaatat gcgttattgg ttaataagtt
       61 taagcatact attaagtggc tgtgtcgtgc cggttactcc tacggggcaa gccggtatcc
      121 ctatgccgat tataattggt gtctcagatc cacttgattc caaagaggtt cacatttgta
      181 ctctaaagcc atttactcag gaatatcgta gtgaacatag tagccgaggc agagccaaat
      241 taaatgtaca aaagcaatgc cgtgcaaacc acagtgaaat gttttgtgaa gaaaaagata
      301 ttgtttgcaa aacctatgat tagttaaaca agcggtcgta ttttatctgt tttttgcaaa
      361 attttcctaa aatttgaccg cttgtttatt taagcagata acatcaaaat tttatgagga
      421 ttgtctatgc aacccatcaa tattgccatc gcaggtgccg gcttttccag ccgagttttt
      481 catatcccgt ttttgaaaca agatgctcgt tttaatattg taaaggtata tgaacgaacc
      541 tctaacaatg cggcagaatg gttgccgaat gcagaaacag tgcgggattt caacgctctt
      601 ttaacgccag aagtggattt agtgctgatt accacaccga atcaaaccca ttatgcaatg
      661 gtaaaagagt cattgcttgc aggcaaacac gttttagttg aaaaaccgtt agtggcaaca
      721 gtggctgagg cggaagagtt ggcggaactt gcaaagcggc aaggaaaggt gctttatgtg
      781 taccaaaacc gccgttggga cagccatatt gcgacggcaa aatcgctaat ggagcaaaat
      841 ttactgggag agttggtaga ttgcgaaatt cgttttgacc gttatgcgaa agagaaaaat
      901 gttaaagtat ggaaagaatc aggcgagctt ggtacaggtt tagtgtatga tttaggcgta
      961 catttaattg accaagcttt gtatcttttc gggaagccgg aggcggtgta tgctgatgtg
     1021 cgttatcagc acgaaggggc attggttgat gataactttg atattcagct ctattatgct
     1081 aacggtttta aagtggtgct gaaagccagc cgatatgctc gtgaaccaag cccgacattt
     1141 gtattacacg gaaaattagg ctcttatctg aaacaaactc ccgataatca agaagatttg
     1201 ctgaaaaatg gcgtacaacc tattggcaaa gattggaata tcgaagaaaa ggagaactgg
     1261 ggaattttac acactgaagt ggaaggtaat gtggttcgcc agccctatcg aaatgccgaa
     1321 gtcagttatc aaaacttgtt tgatgatttg taccaagcca tcgctcacaa tgctgagcca
     1381 attatcaaac tcgaagacgt catttttgtg ctaaaagtga tcgaaagcgt atttgaaagt
     1441 gcaaaattag ggcaaaaaat ctatttgtaa aattttgagg atttttgacc gcttgttatt
     1501 ctctctgatg gcgcaagcgt ccacgcttgt gcctattgat tattttagct ttgtttctag
     1561 tacaagcgtg gacgcttgca ctatctaaaa aatcatctcc cccattgctt ttcccatctc
     1621 gattggctaa tatgcaacct caatccgtag ttagaatact taatatgtta agttttaact
     1681 gttttttcac tctaataagg atcatttcaa tgaataaact tattgcctct ttggtggctt
     1741 caagctgtgc gacggctttt gctgctcctg ttcaacagaa caatttccac accactaccc
     1801 acacttacga atttacgcaa tcttatgatt tagttgtgcc acaaggctcg aaaggaacaa
     1861 ctaatttgtg gattccgttg ccgtctgata ccgattatca aacggtaaaa tcgatagagt
     1921 ttgagggaag ttacaaaaac gcctatatca cagaaaataa cgcttatggt gcaaaaacct
     1981 tgtttgccac ttgggatact gatgcaccaa agcgtgatct aaaagtgaaa atggtgatcc
     2041 aaacccaaga tcgtgagcct atggctcaag gggcgttggc aaattaccaa atgccggaga
     2101 aaatcactta ttctgttgat gtattggagt atttaaaacc aacggctcac attaaaacag
     2161 acggtattgt gaaagaatat gccgataaaa ttgtgggtaa cgagcaaaat ccgttgaaaa
     2221 aagcggaact tatccacaag tggattgttg ataatatgga acgtgataac tcggtgctag
     2281 gctgtggcga tggcgatgtg gagaaaattc tcaccaccaa agtgctaaaa ggtaaatgta
     2341 ccgacatcaa ctcggtgttt gtagcacttg ctcgtgcctc taacattcct gctcgtgaag
     2401 tgtttggtat tcgtttaggg caagcggtaa aaatggggca atattccaaa accgcatttg
     2461 gtagctcaaa agatggcgtg gcgaatgaaa gcggcgggca gcactgccgt gcagagttct
     2521 atttagcagg cttcggctgg gtgcctgtag attctgccga tgtcgctaaa atgcgtttag
     2581 ccgagaaaaa agacgtggat gatgctgatg ttcaagcggt ctcgaaatac ttattcggca
     2641 actgggaaat gaactgggta ggcttcaatc acggacgtga tttcgattta tatccacaac
     2701 cggaacttac accactgaat aactttggct acccttatgc tgaggtaggt ggtgacccgt
     2761 taaactcgtt tgaggcgaaa gaatttggct atgaattcat ctctaaagag ttataaccat
     2821 aaatttatca caatgtgcgt gaccgccata gtgtcggcgg tgacctccac attctgttgt
     2881 attgggccac tggtttattt agtgtttggc atctcttccc cttggttgat ggagctaaac
     2941 caactggagt ttctacaact gccgatgttg ctgatttcgc tcgctgcgtt tggctatggc
     3001 ttctggttgc tgaatttttc caacaaaatc atctgcacca aatacttctc ccgcagaacc
     3061 ctggtcattt tgtattgggt agtttctgtg gtggtgatgt tctttttaac ttacccttat
     3121 gtattgcctt acattttgga aatgtggagc ggagaataaa atgaaaaaat atatcgcaac
     3181 gatgctgttg gcttttggtt tggttcattc aagctacgca caagaaaaaa cagctcaaat
     3241 tgaaacgaaa caagcagaga aaaccgtcgt cctccatatt ccggaaatgt actgccagct
     3301 ctgcgtttat ttagtcaata aagaactacg agcagtagaa ggtgtgattt ccaccaaagc
     3361 ctcaatgaaa gagcgaaaag cgactgtggt ggtaaaagaa agtgtggata accaagccct
     3421 gatacaagcg gtcggaaacc tcaaatatac tgcaaaagtc attgaataaa accaaagctc
     3481 aaacattatt gtttgagctt ttttaattta gccttccttt tttcccccat ctaatattca
     3541 aacttcactt ttgttttgat ttaaaatgaa aaaataattt attttgaaag ttgtttctca
     3601 ttttgtgatc gctgtcacag tttttaaaat aaaaataatt tactatttgc acatctcata
     3661 acagagatga aagaaaaata ttttattttg aaaaacggag atcggtatga ttgaagcaat
     3721 tacacacgga gcagaatggt ttatcggcct gttccaaaaa ggcggtgaaa ccttagtcgg
     3781 tatgataaac ggtattttgc cactcttaat ttcattattg gttgtaatga atgccctgat
     3841 taaatttgta gggcaagatc ggattgaacg acttgctcaa cgtagtgccg gaaaccctat
     3901 ttcacgttat ttgatcttac cggtgatcgg cactttcgtt ttctgtaacc cgatgacatt
     3961 aagcttaggg cgtttcttac cggagcgtta caaaccaagc tactacgccg cagcctctta
     4021 tagttgccac tctatgaacg gcttattccc tcacatcaac ccgggtgaat tattcgttta
     4081 tttaggtatt gccagcggtt taaccacctt aggcttacca cttgggcctt tagccatcag
     4141 ttatttatta gtcggtatgt ttaccaattt cttccgtggc tggataacag acttcaccac
     4201 cgcattcttt gaaaaacgaa tggggatcac cttagataga gaagtacatt tatcccacta
     4261 accaagtaac tgaaatacag aggaatagat tatgagcaac aaagcgattt acattgaaaa
     4321 aggcaacggt ggttggggtg gtccattaac attacctgtt gtggaaggca aaaaagtgct
     4381 ttatatgacc ggcggcactc gccctgcgat tgttaataaa ttggtggaat taaccggctg
     4441 ggaagcggtt gatggtttta aagaaggcga accgccggca gaagaaatcg ggattgcgat
     4501 tattgattgc ggtggggtat tacgctgtgg gctttaccca aaacgccgta ttccaaccat
     4561 taacattcac tccaccggta aatccggccc tttagcagaa tttattgtgg aagatattta
     4621 tgtttcagcg gtgaaagaaa acaatattcg cttaattgat gccgatggaa gtgtgcctgt
     4681 ggcaacagag caagcaaaac caacttcatc aacgacagca acggcaaaag agtatgactc
     4741 cagcaaaaaa atcaccgaac aaagtgatgg tttattagca aaaatcggta tgggaatggg
     4801 atcggtggcg gcgttattct tccaagccgg acgagacact attgatacgg tgcttaaaac
     4861 cattttaccg tttatggcat ttgtttctgc gttaatcggg atcatcattg cgtcaggttt
     4921 aggtgatgtg attgcccacg gcttgacccc tctggcaaac agcccaatcg gtttagttac
     4981 actggcgttg atttgttcct tccctctcct ttccccattc ttagggccgg gagccgtgat
     5041 tgcacaagtt atcggcgtgt tagtcggtac gcaaatcggt ttaggcaata ttccgccaca
     5101 tttagcactg ccggcactct ttgctattaa tgctcaagcc gcttgtgatt ttattcctgt
     5161 gggtctttca atggcggaag caaaacaaga taccgtacgg gtgggtgtac cgtcagtatt
     5221 agtcagccgt tttttaaccg gtgcaccgac cgtgctgatt gcgtgggcag tttccgcatt
     5281 catctaccaa taattaacca cgatacaagc ggtggaattt gaaaaatttt ttgcaaaatg
     5341 caccgcttgt caaaacgaga gaacatttat atgacgatta tttatcaaac gacctttacc
     5401 aaaatcggga attttgctca ggaatcatta acagacgata tgttaatcac ttttaaacaa
     5461 ggcgcaccgg cagatttaca agattactgc ttcattcata atccatctga attaagtagc
     5521 cctttagaag taggcgatat cgctgaattt gatggcgtag cttatccgat tacggcagtt
     5581 ggtagcgttg catctgaaaa cttatccgcc ctcggacaca ttaccttccg ttttgacggg
     5641 gcaaatgatg cggaatttcc gggaagcgtt cacgttatcg gaacaccgcc gcaaggctta
     5701 acagagaact caaccttgat tatcaagcgt gattaatgac ggattaaaaa taatttcaaa
     5761 ttgaaaattt agaggaatac attatgaaca atgaaaaaaa agttgctatc gttgttggcg
     5821 gcggtcaaac acttggagct tttttatctg aaggcttggc agatgccggt tatcgtgtgg
     5881 tggttgctga cttaaacggc gaaaatgcac aaaaagtggc agccgacatt aatgccaaac
     5941 aaggcgaagg aaatgcgatt ggggtgcaag tcgatgcggc tgatgaacca agcgttgaag
     6001 cactagctaa agcaacagat accgtattcg ggcgtgccga tgtattggtt tacagtgcag
     6061 gcacagcgaa agcatcgcct atttgggatt tcaacttaaa cgattttgat ttgtcggtaa
     6121 aagtgaattt aaccggttat ttcttaaccg caaaacactt ctcccgctta atgattcgtg
     6181 acggtattaa agggcgtatc attcaaatta attctaaatc gggtaaagta gggagtaagt
     6241 ataattccgg ttatagtgca gcgaaatttg gtggtgttgg tttaacacaa tcgttagcat
     6301 tagacttggc agataaaggc attaccgtgc attcattaat gttaggcaat ttattgaaat
     6361 cgccgatgtt ccaatcgtta attccgcaat atgcggcaaa actcggcatt ccggaaagcg
     6421 aagtagagca agtttatatt gataaagtgc ctttaaaacg tggctgtgat tatcaagatg
     6481 tgttgaatgt cttaaaattc tatgccggcg aagaggcagc ttattgcaca ggacagtcta
     6541 ttaatattac cggtggtcag gtaatgttct aagcaaacaa gcggtcaaat ttgtcgattt
     6601 ttttacaaca atttgcaaaa aatgactaaa ataaaccgct tgttaattcg ccacaccggt
     6661 taatatgcca caggggaaag cgtattgttt tgaaatcgca ggtacgttta ggctctgtgg
     6721 ctttttatta aggagcaatg atggattcaa ttacacttct gattatattg gcaatgataa
     6781 tgtggctgtt acaagccgtt ttgggttggc ttcaaattaa agcctttaac caagccttta
     6841 tggaaatcag taagaaaggc aaagtaacgg ttgggcgtaa tagtggtcgt tttaatccta
     6901 aatcggttat tgtgttggcg tttgatgatg agaaaaaagt ggtagatagc ctttgtatga
     6961 aaggattttc cgtctttgcc agaccgcaga aattagcgtc tgtgattggt ttgtctcttg
     7021 atcaaattgt gccggaaaaa atctttccaa gcgataaacg ttcacaattt gccttaaaag
     7081 tggcgatatc ttccggatat agttgctcag atcaaaaata atgcgatttt ttatttcatt
     7141 ttgaatattt ttttagttaa aaatgagata atggagaata aatatgcaga tcaatagtgt
     7201 catctttgat atggacgggg taatgattga ttcagaaccc caatgggcag aggctcaaat
     7261 tgcagtatta gccgacttag gtattaatat caccgagcaa gattgcgaac aactcaccag
     7321 aggtaagcgg attgatgagt tgagcgacac ttggattaaa aaatttcagt tatctgtttc
     7381 caaccaagca ttaagtgaag ccattttggc acacggttgt gctgcgattg aacaacacgg
     7441 caaagcatta acgggtttat atgaattatt ggatttctta aaatctaatc agatcaagtt
     7501 agccgttgca acctcatcgc cgccggtggt gattaaagcg gtgtttgatc gcttaaaact
     7561 gtgggattat ttcccgattc gatgcagtgc aatggacgaa gaatatggca agccacaccc
     7621 tgcggtctat ttgagtgcag tgaaaaaatt aggcattgaa aaacaagagt gtattgttat
     7681 tgaggacagt gtaaccggct taattgccgc caaagccgct aatttaacta catttttggt
     7741 gaataccgat tatcaaaatg aaaaattttc aattgccgat aaaagaatgg catcgctact
     7801 agatgtcatt gaaaaattaa aacagcatta gcacagatta gctcgctcca atctttgcta
     7861 aattggagga acaatgaaac cttttgaaag aagacagcaa attttagcct atttagctca
     7921 gcacggtaga accgaagtgg acgtgctggc agactatttt aagctaactg gtgcaaccat
     7981 tcgtaaagat ttaacttcac ttgaagaaga taagaaagtc ttgcgtactt atggcagtgt
     8041 agtcttaatt gatgaagaaa ttcttgaacg ggaagagaaa atcaataaag aggacaaaga
     8101 cgataaaccg cttgcacaga aaaccggcat taatcttcaa caaaagcaag ctatcgggca
     8161 aaaagctgca gagttaatta atgagggaaa ctctattatt tttgatgcag gcagcacagt
     8221 gttacaaatg attccccatt taaaagcatt tgataacctc tctttaatga caaatagttt
     8281 aactattttc aatgagattt tgaaactcaa taaatcctat aacttactga tttccggtgg
     8341 tacatttcgt gagaaatcag cttcatttca cggttatttt gctgaatccg cttttattgg
     8401 ttcaaatttt gacatactct ttattggcac agacggacta gatttagacg ttggattaac
     8461 gactttcaat gaagtatata aagtcagttc gctaatgtgt gatgcggcaa ataaaatcgt
     8521 cttacttgcc gactccagta agtttggacg taaaagtccg aatattgtgt gtgggttaga
     8581 aaaaattcat actatcatta ccgatgaagg attatctcaa gaaatgagag aacagattaa
     8641 agcgaaaggg attgagctgt tagttgtata agggcgtaaa aatgaatcat ttagacagtg
     8701 caaaagaaac gttaaacctc tatgctcagc agattatcac gctaaaccat cgactttctg
     8761 aagaatttaa tgaggtggta aatatgatac tcgcttgtca agggcgagtg gttgttggcg
     8821 gtattggaaa atcggggctg gttggcaaaa aaatggtggc aacttttgcc tccaccggta
     8881 caccgagctt tttcttgcac ccgacagagg cttttcacgg cgatttggga atgctgaaac
     8941 cgattgatat ggtaattctg atttctaaca gtggtgaaac tgatgatgtg aataaactga
     9001 ttccaagcct gaaaaatttc ggcaataaaa ttattgcgat gacaggtaat ccttactcca
     9061 cacttgggcg aaatgccgat gtgattttaa atattggtgt agagcgtgaa gcctgcctga
     9121 ataatctagc tccaaccagc tctactttgg taacgatggc tttaggcgat gcgttagcca
     9181 ttgcgctaat gaaagcccgt gatttccgcc ctgaagattt tgcccgctac cacccgggtg
     9241 gcagtcttgg tcgtaaatta ttgaacagag tgcgagatgt gatggtgcgt aaagtgccaa
     9301 ccgccagctt agacaccacc tttaccgaat gtttatctgt gatgaacgaa gggcgtatgg
     9361 gggtggcggt aattatgcaa gacgataaat tggaaggcat tattaccgat ggtgatatcc
     9421 gccgcacatt agcgaaattc ggggcggaga gcctaaataa aaccgctgac gaaattatga
     9481 cccgtaatcc aaaaaccatt aacgataccg aatttttagc caaagccgaa gatttaatga
     9541 aagagctgaa aattcactca ttaattgcag tgaatgatga gggtaaagta acgggattga
     9601 tggagttctc tagttaattt atagatgtaa cgatggcgca agcgtttacg cttgtgccgt
     9661 tcactgacat atatcaatat ctaataaaac aggtaagttg ttagcataat ttcttgcact
     9721 gctatatttc cattcaaatg cctcgcatac aaaaccgctt acgatagggt tgttgtgaat
     9781 atggtttagc ttttcatcaa aaaatttctg agaatagatt gttatcggtt ggttatgatg
     9841 ttgccaaagt tggtattgct tgacattatt tcgttgttta gctgcccgag taaacatcca
     9901 taataaccat tcttttctac tttcttgggg atttgtttta atttgctgaa tcaacattta
     9961 gatgtaaatg ttttaaaatc tcttattaaa tctgacgggt tttggtcttt tgcttgaaat
    10021 aataaatgaa tatggcttgg cataatgcag tagccatata aaatcatccc tttttgtttt
    10081 cgacaataat tcaatgattg gataatggtt tgaaaataat cttctcgaat aaatagatca
    10141 atccaataaa ctgttgcaaa actaacaaaa taggctccgc tcttctcata aaacttatat
    10201 tttctactca ttatgaacct ctaaagtgca gtttatgctg atagtaatat aggtgaacag
    10261 ttagggttag caattcattt tattttttcg atgtagatcg caaaaataga attatgcttg
    10321 gcacaagcga ggacgcttac gccatcttta ctccaaaaat gtgagataga tcacattttc
    10381 aaatctgccc aaaaaaattt aatgtgatct acttcacatt tctgagagaa acatttttgt
    10441 aacttttgaa agtggtgcta atttaagcac gattttttca accctaattt tctctccttt
    10501 tttgaggttt ctatgtctaa tttaaaagtg aaagtccaag gttttgggcg tttcttatcg
    10561 aatatggtga tgccgaatat cggtgccttt attgcgtggg gctttatcac cgccctgttt
    10621 attccaaccg gttggttgcc gaacgagact tttgctaaac tggtcggtcc gatgattact
    10681 tacttgctgc cactgttaat cggttacagc ggtggtaaat tagtcggtgg tgagcgtggt
    10741 gcggttgtag gtgcgattac tacaatgggt attatcgtgg gttctgaaat cccgatgttc
    10801 ttaggtgcga tgattgtagg tccattaggc ggctgggcga tcaaaacctt cgataaagcg
    10861 attgacggca aagtaaaaag cggttttgag atgttggtaa acaacttctc ggtcgggatc
    10921 atcggtatga ttttggcaat gctttcattt gctttcattg gaggtatcgt cacccaaatc
    10981 tctgcggcat taggtgcagg tgtgggggcg ttggttgaag ctggtcttct gccagtaacc
    11041 tctatcatcg ttgaaccggc gaaaatccta ttcttaaaca atgcgatcaa tcacggtgtg
    11101 ttcacgccat tgggtacagc acaagcacaa gaagtgggca aatctattct gttcttgatt
    11161 gaagcgaacc cgggtccggg ctttggtatc ttgcttgcct atatgttctt tggtcgtggc
    11221 acagcaaaac aaaccgctgg tagtgcgtca atcattcact tcttaggcgg tattcacgaa
    11281 atttatttcc cgtatgtgtt aatgagccca cgcttaattc ttgcagtgat tgcaggcggt
    11341 gcaaccggcg ttttaaccaa ctcattatta ggtggcggtt taatcgcacc ggcttccccg
    11401 ggttctattt ttgcgatttt agcaatgacc gcaccgggtg ctcactttgc agttgttgcc
    11461 tccgtgattc tttcttgtgc cgtgactttt gcgattgcgt caatcttact caaaacccaa
    11521 aaaggtgaag cctcattgga agatgcacaa gcacaaactc aagcgatgaa agcagaaagc
    11581 aaaggcgtag taaatggtaa catcaacaaa atctatgtag cgtgtgatgc cggtatgggt
    11641 tcaagtgcga tgggtgcgag tatgttacgc aaaaaagtgc aagcggcagg tttaaacatt
    11701 gaagtacaaa acttagcgat caacgactta ccgcaagacg cacaactggt gattacccac
    11761 aaagacttaa ccgctcgtgc aacacaacgt gtggcaacgg ctcaacactt atcgctcact
    11821 aacttcttag acagtgcgtt ctatgacagc ttagtggcaa aactggctaa ccaccagcca
    11881 caacaagcgg tgcaaaatac acaaaatttt gcaaacccgg tggaagaacc tcaagccgaa
    11941 gggttaaaat tgcaagcagc ccaagtcttt ttaggcttac aagctaacag taaagaagaa
    12001 gcgatccgct ttgccggtga gcagttagtt aaagcgggct ttgttcaacc aagctatgta
    12061 gatgcaatgt tcgcccgtga gcaaatggtt tcaacttact taggcgaagg cttagctgtg
    12121 ccacacggta catctgatgc caaagacagc gtactgaaaa ccggtatcgt ggtctgccaa
    12181 tacccgaacg gcgttcgctt caccgatgaa gaagacggcg tggcgaaact ggtggtcggt
    12241 attgcagcaa aaggcaacga ccatatccaa attttaagtg caattaccaa cgcactggac
    12301 gatgaacaag caatgaaaac actgacctca acaaatgacg tggaaaaagt gttagcatta
    12361 ttatctaaat aatcaccctg ttgtgtaggg gcgggtcctg tgcccgccca ttatcctaca
    12421 aaatttaggg cgggcacagg acccgcccct acgttttata gaggaacaat catcaatgaa
    12481 cgcactccat tttggtgccg gtaatatcgg gcgtggcttt atcggcaaat tgcttgctga
    12541 tgctcgcatt ttcgtgactt ttgccgatat taaccaaact caaatcgacc aaatcaacca
    12601 aaacaagcaa tacggcgtga aaatcgtggg cgatgacagc cgtgtggaaa ttgtcaaaaa
    12661 cattgcggca attaactcga aagacgaaaa tgccgtgatt gagcaagtga aaaacaccga
    12721 tttaattacc accgcagtcg gcccgaatgt gcttggcttt attgccccac tgttcgccaa
    12781 agcgttagtg gctcgtgtgg aaagtggcaa cacccaaccg ctgaacatta tcgcctgtga
    12841 aaatatggtg cgtggcacaa ctttctttaa aggtaaaatt tttgagcatt taactgccga
    12901 gcagcaagca gaaattgaaa aagtggttgg ttttgttgat agtgcggtgg acagaattgt
    12961 accacctgcc gagccgaacc ctgctgatcc gttggaagtc acggtggaag agttcagcga
    13021 gtggattgtg gatcaaaccc agttcaaagg tgacattcca aacatcaaag gaatggaatt
    13081 aaccgataac ctgatggcgt ttgtggaacg caaactgttc accctgaaca ccgggcattt
    13141 aatctgtgcc tacttgggca aacaagcggg cgtgaaatgg attaaagagg cgattgcgat
    13201 tgaggaaatc aaaactcagg tgaaagccac aatggaagag agcggtgctg tgctgattaa
    13261 acgttacggc ttcgacccac aagcccattc agcgtatatc gaaaaaatcc tcaaacgttt
    13321 tgccaacccg tacttaaacg atgacgtaaa ccgtgtaggg cgtgagccaa tccgcaaact
    13381 gagcgaaaac gaccgcttga tcaaaccgtt gcgtggcacg ttggaatatg gcttaccgta
    13441 tcaaaacttg gtcaaaggcg tggtgatggc attgcaatat cgcaatgagg aagacccaca
    13501 agcggtcgaa cttgccgaat ttattgcaaa tcacggtgtg gcggcagcgg tggaaaaata
    13561 caccggttta accgaccaag cggtcattgc tcaagtggtg gaattatatc aataattctt
    13621 gacactatga tggattacat cgacaaactc agtgaggaaa ccaccctgcg tggtttcctt
    13681 agcattgcca atcaacgctt tgccaaagcg gttgaacagt tgattgaacg agtgtttcgc
    13741 aaaacggact ttgcgttaaa atccgtggtg gattccttgt ttgaacatca aggaccgctg
    13801 gctgacattg aagtacgttt aaaagtgttg cttgggttgg gggtgatctc acctaaagtg
    13861 tttgaagata tctcgctttt ccttgaagtc aaacagcatt tgaatgagga agaagacgag
    13921 ttcgcatttt ctcacccggc ggtagtgaaa tttgccaaag atttgcacca tattgatttt
    13981 ttgcctatca atgaattgct gaatatgaaa gcgagtgcag cgaataaaga ttcgatgctc
    14041 tttcaaatgc agcaaatgcg gttggaaaaa atggtacgtt caagcctgat tttggcggta
    14101 actgaaattg acgaacaact gaatgtggaa agcccattgt aaaaatttcg tcaaaactaa
    14161 ccgcttgtac tgagcattca cgccgtacgt gattgctttt tcctttcttt ttgatcttat
    14221 cggctttttt ctttgcttaa agcggtgtaa tctatcccta actattttgg aggatatggt
    14281 tatgcaatcg ttgctctctt ttgtgccgga ttttcttaag caagaactgt tttgggtaat
    14341 ggcgttattg gtatttgcga tttggcaatt tatccaaaac aagttgcgta tggacgtggt
    14401 tgccttaatt gtaatgctgt tttttagcct gactaatatt ttatcagtca aagaagtgtt
    14461 ggcaggctta agtgacccaa acgtggtgct gattgcgttg ctctttattg tcggagaagg
    14521 tttggtgcga accggcgtgg cgaaccaagt cagcgattgg ttgatgcggg tgtcgggagc
    14581 gagcgaaacc aaagtgctgg tgctgctaat gctctgtatt gccgggcttg gatcttttat
    14641 gagttccacc ggcattgtgg cgattttcat tccggtggtg cttgccattt gctcgggaat
    14701 gggaatttct cctcgccggt taatgatgcc gttaagtgtt gccggactta tcagcggtat
    14761 gatgacctta attgccacac cacccaacct tgttgctcat tccgaattag taaaatcagg
    14821 ttttgaaggc ttcaatttct tcagttttac tccgattgga ttaattattt tagtgatggg
    14881 catcggctat atgctgattg cccgccgttg gttggataat ggtgagcaaa gcaatactca
    14941 cagtcaggct caaaaatttt caatgtcgca gttaattgaa gagtatcaac ttaaagagcg
    15001 agccaaaatg gtgctggtgg aagcagattc agactgtgtc ggcaaatcta tcgggcaact
    15061 gaatttacgg attgagcaag ggctaaacat cattgcaatt caacgcacta agcggtttag
    15121 aaaaattacc gtcagtgcct cggtaaacga aattttccag ccgaaagata ttttactgct
    15181 tgatactgcc ctcgatgatg aaacttacca acaacgctgt gaacagctca aacttcgccc
    15241 gattgagcta aaaggcgaat acttttcctc acaatatcgc tcggtgggta tggcggaaat
    15301 ttcggttatg cctgaagcag aatgtatcgg taaaactatt cgggaactca aattccgctc
    15361 aagataccat ttaagcattg tcggcttaaa acgtggtgat gaaatcatac aagaggaact
    15421 gctcgatacg ccactcaaat tcggcgatat tttattggtg atgggcgtat ggcaacaaat
    15481 tcaccgtatg gacgacgatc atcgagattt cttcttgctt agagatccgg cagaaagtaa
    15541 aaacgcccct ccggcgttaa gccaagcccc tcacgctctg ttctcagtgc tgactatggt
    15601 gttgctgatg attaccggca ttgtgccaaa cgtgatggca gcgttgattg cctgcttaat
    15661 gttaggcaag ttccgctgtg tggatatgaa aagtgcttat gattcgattc atatgccaag
    15721 cattgtgttg attgtgggga tgatgccgtt ttctattgcc ttacaaaaaa ccggtggtgt
    15781 ggatttaacc gttaggcttc tacttgatgc aatgcaaggc ttagatgtac attttgttct
    15841 aatagtatta tttgtagtaa cagcgattat cagtgctttt atttccaaca cagcgactgc
    15901 aattttggtt atgccgatag ccattgcgat tgctaaccaa cttggctact caccggcacc
    15961 ttttgtgatg acggtcgctg tttcagcctc cgccgctttt atgacgccgg tttcttcacc
    16021 ggtaaatacg atggtattag caccggcagg ctataaattt attgatttcg ttaaagttgg
    16081 tgtgccgttt actgtactgg tgatgctggt gtcggtgttt gtgattccga tgttatttcc
    16141 gctctaaaca ctcctctaaa ttacaagcgg tcatttttgg taatctgacg ttgacggtaa
    16201 aattgttgag tatgtctggc aacatagtgt ggggtactga tcttttttgc atagagagaa
    16261 agaaaaaaat ttgggcggaa aaataacggc gaggctagga aatacaaggc ttcgccgttt
    16321 ttgtttgggg tgagttatgc aaaaaacgaa aatgagcaaa aatagaaaaa aatgggctat
    16381 ttttacgtta ttttttgcat aggtctgagc aggtttaaac ggattttaaa acaattttaa
    16441 gcgccctcat ctcggctggc tcggttgcgt tgctctaagc tgtgaatgag gtcgtgtaca
    16501 cgttgtttat cggcacaggt taggttggtg ttattatcca ccgtgcagcc ggcaatcacc
    16561 gtggcgttat cgccgttttg aatgatgacg ttgctgttat taaacacctg tataggctct
    16621 tggcttggct ggctgttgcc ggcagtgcta ttgtctctga ataatttgag aatggcttgt
    16681 ttgtccatat tgtcccctgt tatgccacca gtttgagtaa tcccaccatt ttttcttttt
    16741 cgcttttttc ttgcgtgaga agctcgtaga aagcccacac catttgggct tttccggcag
    16801 gcttcatttc ccgttgggta atttccagca cctcttccaa cgtttctatt gcctcttgta
    16861 acttagcttt gataacaact acttcccctt cttctgtctg cggttttgtg gcatacacag
    16921 gctgtggctc tcttgtgaca ttaaggcttt gcgagtgtcg ctcacctgtt aataggtagc
    16981 aaggctcaac gttaagtatt tgtgacaaag ccataagttt tgatatagga ggttctcttg
    17041 tatcagcctc ccacgcttgt aatgtagata ttgcaatacc tcctagggca tcacaaacct
    17101 cagatctact taattttgca ttttttctgc tctgttctat tcggttaccg aaaccaataa
    17161 cctttttaca ctctattttc ataactgtaa aaaaataagt tgagattttt agccttttac
    17221 actctaaaaa cctataaata aatcaataac ttacagcaaa ctaagtttat ttgctcataa
    17281 atcaactata aagcaacctt tttacacttt atttttagta aaaataggta tattatctaa
    17341 atcgttaagc gaaaggagtt atctaatgag tacattggaa gatattaaaa aaacagcgaa
    17401 agactggcat agggccgaca tcatcgctgc tttacataaa gcgggttggt cgcttagaca
    17461 actctcattg aagcatggct acagtcaatc cagcaccttg aaaaacgctg tagatcgtcc
    17521 gtggttaaag ggtgagcgta ttattgccga agcaatcggt atatcacccg aagaaatttg
    17581 gcctgaacgt tatgctcaac gaaaccataa aaaatttgcc gacagatagc ttaaagaggt
    17641 ttttatgagt gaaaacagtc taaaaacaca ctattcggca aaagaattgg ctgagttaag
    17701 tttagcctgt ttacctaaaa caaagcaagg agttttgtat caggcaaaga aacaaggatg
    17761 gactactcat aaaaaggttg gagttggggg agaaatttta gaatttgcac tctcaaacct
    17821 ccctcaagaa atccaaaccg aaatccgctc ccgctttatg tcggcggtgg tggaagccaa
    17881 gccgaaaaag ttaccggcag tgcgtgcgga ggtggatgtg ggaaacctga ccaccaaaca
    17941 gcgagaaatt gctgatgcac gaatggcact ggtggcgtat gtgttggaac tggaaggctc
    18001 aatgagccgg attaaagcga taacctacct ttgcaacctt gccaaacaag gcgaaatgcc
    18061 accgcacttg gtggagctgg ttgccgtagc aaatgctaaa aagacggcaa aacgcacaat
    18121 agttcccatt tttagcccga ttatgccgga tttcccgttg gatagtcgag attgaccgct
    18181 tgttatccaa ttaggctttt ttcttgctga tggtatctac ccaaactgca agcagtagaa
    18241 ttccaccttt aacgatatat tgccagaagg ttggcacatc aagcatactc ataccgttat
    18301 ccagcaaagc aataataaat gctccaataa ctacgccata aatgctaccg ataccgccgg
    18361 ctaaactggc tccaccaatc acgcaggcgg caatcgcatc taattcggca ttttgcccgg
    18421 cggaaggtgc gccggctcca agacgtgagc ttaaaatcaa gcctgcaatg gcaactaata
    18481 agccgtttaa ggcaaaaatc gcaagtttga ctttttcaac tgaaatcccc gagaggcgag
    18541 cggcatcaat gttgccacca atcgcataaa tgtgacgccc gaaggcggtt tttctggcca
    18601 agaatgtgcc ggcaatggct agaatcacca acaccaatac cgggaatggc acaccacggt
    18661 aatcattgag taggtagatc gcacctaata cgataattgc aactagtccg tatttcagcg
    18721 tgtctttcga catagaaggc acagtaagat tgagtttttg tctggctttg cgttggtagc
    18781 taccccaaac aataaagcaa aatatcccga tagtacctaa aatcataccc accatatcag
    18841 gcaaatagcc ttgaccaatg gttgtcattt cattgctaat cggtgaaacg gttgtcccgt
    18901 tggttaagcc gaccaataca ccacgaaacg ccagcatacc ggcaagagtt acaataaagg
    18961 acggcacttt ttgataagca acccaccaac cgctccaagc acccagcatg acgcctaaaa
    19021 ttaaagtaac tataatagtt aacgagagcg gccagcccca ccatacatta ctgatggcgg
    19081 caaatccacc gagtaagccc attagcgagc caaccgataa atcaatttct gcggaaataa
    19141 tcacaaatac cataccgatg gcaagaatac cggtaatgga ggtttggcgt aacaggttgg
    19201 agatatttct ggcacttaaa taagcaccgt cagttgcaat agagaaaaag ctcataatca
    19261 caacaattgc aatcagcata atataaactt gtaaattaat cgattttaac ttattcatag
    19321 gttactcctt gagtgccgct tccattactt tttcttgggt aaggtcttgg ttaatcaaat
    19381 ctgctttaat tttgccttgg tgcataacca atacacgatc actaatgcct aaaacttcag
    19441 gtaattcgga ggaaatgacg ataattgcca taccttcttt agctaattgg ttgatgagct
    19501 tataaatttc atattttgct cccacgtcga taccacgggt cggctcatct aaaatcagga
    19561 ttttagggtt aagcaatagg cattttgcca aaattgcttt ttgctgatta ccgccactta
    19621 accgtccaat tgctaattca ggcgaggaag ttttcacttt cagttttgca atagattggt
    19681 tgataatggt ttcttccagc ggttcattta ttactttttt gccaaaacaa aattgcggta
    19741 atgaagagag agttatgttt ttacccaccc ccataattgg aatgatgccg tgttttttgc
    19801 gatcttccgg caccatcaca atatggtttt caatcgcttg tgcacaattt ttgattttaa
    19861 tcggttgctt atgcagaaaa atatcacctt gatatttgcc ttggtaagag ccaaaaatac
    19921 attgtgccat ctcggttcgc cctgaaccga ccaaaccagc aatacctaaa atttcacctt
    19981 ggcgtagtac aaaattagca ttatcaaccc gtttgatatg tgtattggtt gggtgccaag
    20041 cggttaaatt ttcaactcga aggacttctt caccaatatt gtgtggctcg tgtgggtaga
    20101 gcgaggtaat ctcacgtcca accatcatcg taataatatc gtcttcactc attccctctg
    20161 cactgcgagt accgatatgt tcgccgtctc gaatgacaca gattttgtcg gaaatggctt
    20221 tcacttcatt caatttgtgt gaaatataaa cacaagcaat attgtgagct tgtaaatctt
    20281 taattaaact cagcagaatc tcggtttctt tttcggttaa cgaggcggta ggctcgtcta
    20341 aaatcaacaa ccgtacctgt ttattcaatg ctttggcaat ttcaaccaac tgttgttgcc
    20401 ctaaacctag ctctccaact ttggtgtttg ggtcaatatc caactgcact tgttcaagta
    20461 aggttttaca acgcagatac atttcattgt catctgtaat ccctgatttg gtaatttcat
    20521 tccctaaaaa catattctcc aaaatcgaca tattttttac taaggtcaat tcttggtgaa
    20581 taatcgaaat gcctttttct tcagtatctt tgatatttct ggcaatcaat ttttcgccgg
    20641 aaaaatagat ttccccttca taatcaccgg caggataaat tccacataat actttcatca
    20701 gagttgattt gcctgaacca ttttcaccac ataaagaaag tatttcgccg gtttcaaggg
    20761 aaattgaaat attatttaat gccacaacct caccgaattt tttagtgatg ttcttcattt
    20821 ctaataattt cgccatactt agttagcccc ttattttcaa aaatggcgag gaagcctcgc
    20881 catctagaaa aattaaagtg atttatttat atactgcatc tttggtatgg aagccgtctt
    20941 taattactgt gtcatcaata ttttctttag ttacaacaac cggctctaat aaatatgccg
    21001 gtacttcttt cataccgtta tttaattgag cattcatttc tactttctca tctttaccta
    21061 atgcaacagc aatttcggca gctttgtcgg ctaaattggt aattggttta tacactgtca
    21121 tcgtttgcgt accggcaata atacgtttaa ttgcggctaa atctgcatct tgtccggaaa
    21181 ttgcaacctt gctggataac ccttgggcac ttaacgcttg aattgcaccg cctgcggttg
    21241 catcgtttga agctacaact gcatcaatat tatttttatt agcagttagt gcattttcca
    21301 taatctgtaa tgctttttca gcaagccaag aatctaccca ttgatcgcct accactttaa
    21361 tttttccact gtcaattaac ggttgtagca ccttcatttg acctttacgg aacagcttcg
    21421 cgttattatc tacaggtgaa ccacccatta ggaaataatt cccctccggc ttttgcccaa
    21481 taatgctttt agcctgcaat tcacctactt tttcattatc aaatgaaaca taaaaatcca
    21541 catcggcatt attgattaag cggtcgtaag caagtacctt aacaccttct ttcttcgcct
    21601 cggcaatcac attggataac acttcgccgt taaacggaat aatcaccaat acatcaatat
    21661 ctttattcaa catattctca atttgtgaga tttgtgcggt tgcatcgcca tttgccgatt
    21721 gaacgaagac ttttgctcct aagctttccg ctttattcac aaaaatatct cggtcttttt
    21781 gccaacgctc taagcgtaaa tcatcaattg acataccgat ttttagatct ttagcaacag
    21841 aagcattgct gagtaccatt aaagtcgccg tagcaatggc taataattta gacttaagtt
    21901 tcatagttca cctcattggt tatgaaaatg tgagcatctt tttcgcccgt aagcagtctg
    21961 ggcttatttc aaatgaagtt caattatcat atttattaat atcattatga tttttcactt
    22021 ttgtgatcta cgccacatta accaataatc gaaatccaaa aacgaaatat cgtaattgaa
    22081 ggttttgcat aattttccga tgatgttacc gaaagattat ttttccaatt cataggagca
    22141 ttattatgtc taactatttc gacaaaatct caaaagtaca atatgaaggg gctaattcca
    22201 ccaacccgtt tgcattcaaa cattacaacc cggatgaagt ggttttaggc aaaacgatgg
    22261 cagaacatct gcggttagcg gtttgctatt ggcacacctt ctgctggacg ggtaacgata
    22321 tgtttggcgt gggttcgctt gacagaagct ggcaaaaaac gggggattta ctgcaaggtg
    22381 cgaagcaaaa agcggaaatt gcctttgaat ttttccaaaa attaggcatt ccttactact
    22441 gcttccacga tgtggatgtt gcaccggaag gcaacaattt caaagaatat cagcacaatt
    22501 tcaacactat tgtggatatt ttagagcaaa aacaagctga aacaggcgtg aaattattat
    22561 ggggtacggc gaactgcttt accaatcctc gctatatgtc gggtgcttca accaatccga
    22621 atccggaagt ctttgcttgg gcggcagcac aagtctttac cgcaatgaac gcaaccaaac
    22681 gcttaggcgg cgaaaattat gtattatggg gcggacgtga aggttatgaa accctactca
    22741 acactgactt aaaacgtgag cgtgaacaaa tcggtcgctt tatgcagtta gtggtggaac
    22801 ataaacacaa aatcggtttt aacggcactt tattaattga gccaaaacca caagaaccaa
    22861 ccaaacatca atatgactac gatgttgcca ccgtttacgg tttcttaaaa cagtttggtc
    22921 tagaaaaaga gatcaaagtc aacattgaag caaaccacgc cactcttgca gggcatactt
    22981 tccaacacga aattgcgact gccaccgcat tagatatttt tggctcgatt gatgccaacc
    23041 gaggtgatcc gcaattaggt tgggataccg accaattccc aaacagcgtg gaagaaaaca
    23101 cccttgtgat gtatgaaatc ttaaaagcag gtggtttcac aacgggcggt ttcaactttg
    23161 atgcgaaaat ccgccgccaa agtaccgatc cgtatgattt attccacgca catatcgggg
    23221 caattgatgt gttagccctt tcgctaaaac gtgcggcaaa aatgctggaa gatcaagcat
    23281 tacagaaagt agtagataac cgctacgctg gctggaacca agatttgggc ttacaaattc
    23341 taaacggtaa agcaagcctt gaagatttgg caaaaatagt ggaaacccaa gggttagatc
    23401 caaaacctgt ttccggtcag caagaatatt tggaaaattt ggtaaatagc tatatttacc
    23461 gttaatctac aagcggttgt tttttatcaa ttttttgcaa agttaagctc gatctgatcc
    23521 ccctctttgc taaagagggg tgatagatct ccaaaactta aaattgcaaa tgttccgaat
    23581 aaaatgaccg cttgtattca ataacaaagg aatatttatg tacattggaa tcgatctcgg
    23641 cacatcgggt gtgaaagtcg tgttactcga tgaaaatcaa cacattattg ccatcacaca
    23701 aaaatcactt cctatttttc gtccacaccc attgtggtct gaacaaaatc cgcaagattg
    23761 gtggaatgcc accaatgaag cgatgttaga actttccgct actcaagatt tacaagcagt
    23821 aaaagcgatt ggtttaaccg ggcaaatgca cggagcgact ttactagata acgcagataa
    23881 tgtactttcc cctgcgattt tatggaatga cggacgtagt tttatggaat gcgaagagtt
    23941 agaacagctt gtgccaaata gccgtgaaat tacaggcaac ctgatgatgc cgggctttac
    24001 cgctccgaaa ttgcgttggg ttgataaaca ccagcccgat attgccgaaa aagtcagcaa
    24061 agtcttgcta ccgaaagatt atctccgctt gttgatgagc ggcgaatatg cctctgatat
    24121 gtctgatgcc tccggcacaa tgtggcttga tgtgggtaaa cggaattgga acaaatcgct
    24181 actaaatgct tgcggattag acattgaaaa tatgccgaaa ctgtttgaag gcaatcaaat
    24241 cacaggttat ttacgtccaa cccttgccga gcaatggaaa atgaaatctg tgccgattgt
    24301 ggcaggcggt ggcgataatg ctgccggtgc aatcggcatt ggcttatacc aaaccgggca
    24361 agctatgctc tcattgggga cttcaggggt ttattttgta gtgagcgata aatttcaggc
    24421 taatccgcaa aaagcagtgc atagtttttg ccacgcttta cctgatcgtt ggcatctgat
    24481 gtcagtaata ttaagtgccg cttctgcggt agattgggca gtaaaatcat tgggactaaa
    24541 agatgtatcg actttattcc aacaggttga agcaagccaa acggcatctg atgctatttt
    24601 cttaccttat ttatcgggtg aacgtacacc gcataatgac ccttatgcga aaggcgtatt
    24661 ttggggatta agccataatg acaaccaaat aacgatggca aaagccgtga ttgaaggggt
    24721 aagtttcgct ttggctgaag ggattgaggt actccacgaa actggtgtag ttgctgacaa
    24781 tattgcatta attggcggtg gagcaaaaag tgtgtactgg cgacaactac ttgccgatat
    24841 tagcggtaaa acctttgaat accgcaccag tggtgatgtc ggtccggcat taggggcggc
    24901 aaaactcgct caaattgcgc taaacccaaa tcaggatatt gctacgttct gtcagccgtt
    24961 acccctggaa caggtttacc aaccaacccc tgcccgctat gcagaatatc aacaaaaacg
    25021 ccaaaaattt actgagcttt accggcggtt aaaggggtta taattcttgc caactattac
    25081 aagcggttga ttttgcagat ttttttgtaa aatcaaccgc ttgtatcaca ctttagaaaa
    25141 caaattaatc accaatacac cggcaataat gaggctgatg ccgattaagc ctgccaagtc
    25201 aattttctgt ccgaaagcaa aataagcaac aagggcggta aggacaatcc ctacgccgga
    25261 ccaaatagca tacacgattc cgaccggtag ggtgcggaaa ataatagaga gaaagtaaaa
    25321 ggataaaccg tataaggcga gcgagccaat agtcggtata gctttggtga agccgttgct
    25381 taatttgagt aaattggtgg cagcgatttc gaggcagatg gaaatcgcaa gtaaaatcca
    25441 aacgttcatt gatgacctct ttgcgtaaat gcgtgctatt ttacctgagt tgcaaaaaaa
    25501 tttaaaaaaa tcaccgcttg ttttttcctg attaagctat ggtacaatct ttggtgaatc
    25561 aggaggtgtg aaatggcaca ggtttatatc gtacacggtt atacggcgaa tgccgataag
    25621 cattggtttc cttggctgga gcaagaatta gcgaagtgtg gtgtcagttg tgagcggttg
    25681 aatatgccgg attcggcaaa gccgtcatta gatggttggt taaatcatct tgcacaaaat
    25741 gtggagctga ccgatcaaac ggtttttgtc gggcatagtt taggttgcat tgccattttg
    25801 aattttttag ccaaaaatta cgccaagatt aaaggggcgg tgtttgtgtc ggggttctat
    25861 caaccggtag aaaacttacc cgaactgtct gcctttacca actattatgc gattttgccg
    25921 agcgtatcga gctttccaag ctatgtggta agtgcgttag atgataaggt cgtgaatcac
    25981 caatacagtg atgcgttagc ccaacatttg cacgcggatt atattcggtt aaatcaaggc
    26041 gggcattttt tggatagaga aggtgttacc gaattacctg tggtgttgga gttggtgaag
    26101 aagttactcg agtgaaacct gttttggtac aagcgaggac gcttgcacca tctataagtt
    26161 gaatttaaac aaaagttata catcagtctg atagtgccag cgtccacgct ggtacttttg
    26221 tataaaccaa ccctattttg caaaaaaacg gtaaaaataa accgcttgcc tccctatggg
    26281 aaaacttaca gtttaataaa tccatcataa atgtgggtgg catcgccggt catatacaga
    26341 ggatgcccta ctccttgcca ttcaataatc agcgttccac cgggtaaatc cacctgcact
    26401 ttgttatcta acaagccttg cataatgccg accgccactg tgccgcacgc accgctacca
    26461 caggcttggg tttcgcctgc tccacgctca tacacccgta atttaacgtg attgcgattc
    26521 actacttgca taaagctgat attcgcccgt tcaggaaaac gctcgtggct ttctagtaac
    26581 ggcccgagtt catttaccgg ggcggttttc acatcatcaa cttgcagtac gcagtgcgga
    26641 ttccccattg aaaccacgcc acataacacg gtttgtagct cggtgcgtaa aatatagttt
    26701 ttctcaaatt tatttgctgt aaaaggcact tgcgaaggtt cccaaatcgg ttcgcccata
    26761 ttcacacgca ctttgccgtc ttcttgcaaa cttagcacca ttttgccttt tgcggtgcta
    26821 acgtgaatgt cttttttgtt ggttaagcct ttgagcgtaa caaaacgggc aaaacatctc
    26881 gccccattgc cacattgcga cacttcactg ccgtctgcat taaaaatgcg atagtgaaaa
    26941 tctaattcag ggtcgtaagg cggttcaacc aataaaagtt ggtcgaaacc gataccacga
    27001 tggcgatcag aaagcgtacg gatcatctct tcggtaaggt aaacgttttg ggttacacca
    27061 tcaaccacca taaaatcatt gcctaagccg tgcatttttg aaaattgcat attattcctt
    27121 aattaattag aaattttatt gatttagatt atagagatta gttttattta ttgatatagt
    27181 acgtgccgat taatttgatg aaaaatgcag attttttcaa acacagagtt tcatttactt
    27241 atttaggagc aaaaaattat gtctgcgatg tttattatcc aatttgccat agtgttacta
    27301 tgcattttgg ttggcgcccg tgtaggcggt atcggattag gggtgttcgg tggcttgggc
    27361 ttagccattc tttcatttgg gtttgggcta aaacctgccg gtttaccgat tgatgtaatg
    27421 tttatgatta tggcggttgt gtcggctgca gcagccatgc aagcagccgg tggtttggac
    27481 tatatgatca aaattgccac tcgcattttg cgtaaaaacc cgaaatacat tacctttatc
    27541 gcaccgcttg taacttggac attcaccgtg cttgccggta caggtcacgt tgcttattct
    27601 gtattacctg taattgcaga ggtaagccgc cacaacggta tccgccctga gcgtccactt
    27661 tcaatggcag taatcgcctc acaatttgcg attgtcgcca gcccgattgc tgcggcagta
    27721 gttgctgtgg ttgccttcct tgaacctcaa ggtgttacat tgggtaacgt gttaagtgtg
    27781 actattcctg cgaccttatt gggcttaggt ttagcttgtg tgtttgtaaa taaaatgggc
    27841 aaagaattaa aagacgaccc aaattatcaa cgcttattgc aagaccctga atatgtgaaa
    27901 gaaaatcaca ttactaccaa tccaaccgaa ttaccgttaa aaccgactgc gaaattatca
    27961 gtaggcttat tcctattcgg tgcattatta gtggtattaa tgggcgcaat tccagctctt
    28021 cgccctgtgt ttgatggtaa gccgatgggg atggctcaca cgattgaaat tgtgatgtta
    28081 agtattggtg cgttgattat cttcttctgc aaaccggacg gtaatgaaat caccaaaggt
    28141 tctgtcttcc acgccggtat gcgtgcagtg attgcgattt tcggtattgc ttggttaggc
    28201 gataccttaa tgcaaggtca tatggacgaa gtgaaatcaa tggtttcagg cttagttgaa
    28261 accgcacctt gggcatttgc tttcgcatta ttcgtacttt ccgtattggt aaacagccaa
    28321 ggggcaacgg ttgcaacctt attccctgta gcgattgcta tcggcattcc tgcaccggtg
    28381 ctaatcgggg tatttgtggc ggtaaacggc tacttcttca ttccgaacta cggcccgatt
    28441 attgcctcga ttgacttcga caccaccggc acaacccgta tcggtaaata tattttcaac
    28501 catagcttta tgttaccggg cttacttagt atgattttca gtatcggatt tggtttatta
    28561 ctttccaata tcctacttta atcgctcgca aaacctcccg tttgggaggt tttttatttg
    28621 caaaattttc agcaaaaacg accgcttgta acggctcttg caagcattac acctatcaaa
    28681 gtaagcaaaa gcccaccgat taaatgtaaa ctcagcactg tcacaaactg cccccatttt
    28741 tctgctaata gtttttccgt tagttctaaa gagaaactgg aaaaggtggt aaaactgcct
    28801 aaaaaaccgc tgatgaacag caaccgctgg ctctcgccta aattaaaccc cattgcaata
    28861 ccaattaaca aacaaccaag ccaatttgct gctaaagtac caaaggcgaa ttggctgagt
    28921 atcgggttta gccaaacggc taattgccag cggcacatag ctccaagtac cgccccgatt
    28981 gaaatcataa gtattgaaga catcattttt cctcatctaa cgttttctca catcatacct
    29041 aaaaatgagt gatttagaaa aataatgtga tggatttcac aaatttgaaa cttcctattt
    29101 gcttaaaaaa tgccgctttg gcaatatcac tccgaaatat gttcatattc aaacattttt
    29161 tcatcacttt ccaatcattt tcatcttaag gagaaacttt atgagcaaat ccttacgtaa
    29221 tgcctgtatt ggcgaattta tcggtacagg ttttattctt ttcgggtatc cggatttagc
    29281 ggttgatctg cgctagacgt aattttgtaa ataaaccgga ttttagggtt gacggaaaag
    29341 gccagatgcc ctaatattag attcaagagc tgagaacaac ggctcgggca taagcccaac
    29401 gggcgcaccg ccgaacttgg tgcaggatag aagccatgtc atacgatgca aatgatgcgc
    29461 tgaatgaaat cgaagaggcg cttagcgagc ttgaaagggt tgctgaagac ctaatcaaca
    29521 acaacccgaa taaagaatca gaattacgcg gccaaggggt tcaccaagcg acaaagcacc
    29581 tccgttttcg tattcgcaac atccgccgcg gcgaagcaat ttgactaaca tgccgcccta
    29641 ggggcggctt tcagcgaggt cagcatgaaa atcaaactct attttccgga cgagtctatc
    29701 gccacgataa agcgaatggg gcttcgccaa atgtctcccg agactctcag gtggactgcc
    29761 gatcatccgt caagcagcta tggtatgggc gctttgctca gaggcaagtc tggtgaaatc
    29821 cttgatggga agtcttttgc tgcaatggtg catgcctttg gcgcgtggat tgaaacagac
    29881 agtgaagata ccagtcgtcg agttcataac gcgctagtca ctgctgccac tggcaccgag
    29941 gaatcggtta aggtggcaaa ggagtaatgt cgaatatcct caactggcct gattacaaag
    30001 tgctccaggt atccgaactg gagcacgatt accaggtaca cgccgaagtt tccgaaccgc
    30061 ctacgcagtg cccccactgc aatcatcctg aaatcgtcgg ctttggtcgc cgtgatgagg
    30121 tgatcatgga tacacccgtc cacggaaggc gtaccggcat catgcttaac cgccgtcgct
    30181 atcgctgcca gtcttgccga aagacgtttc tggagcctgt accgcacaaa gacgaaaagc
    30241 ggcagatgac caaccgcctg atccagtaca tcgagcgcga gagcctgcgc cgcacgttct
    30301 ccagtgttgc cgaggatgtg ggcgtcgatg aaaagaccgt ccgtaacatt ttcaacgact
    30361 attgtgaacg cctcgaaaag acgctcaatt ttgaaatgcc gcagtggttg ggtatcgacg
    30421 aaatccacat catcaaaccc cgctgcgtga tcaccaacat tcagcagcag accattgtgg
    30481 acatgctgga taaccgcaat aaaaccaccg tcacccgcta cctgagcaaa cgcactgacc
    30541 gcgacctggt gcgctacgtg gcaatggata tgtggaggcc gtaccggcaa gcagtagaaa
    30601 ccatgattcc tgacgccacg gtgatcatcg acaagttcca cgttgtcagg atggcgaacg
    30661 aatcactgga acgcgccaga aaagccatca gaagcgccct gacgccacag cagcgccgtg
    30721 ggttgatgcg agataggttt gtcctactga aacgccgtca cgagctgaca gatgccgaat
    30781 acatgcgttt ttcaggctgg acattgaatt accctgagat tggccaagcc tacgaactga
    30841 aagaagcctt tttcgagatt tgggactgtc agacccggca ccaggcacag gaggcatatt
    30901 actcttggct gcgacagatt acgccggaaa tgaaagccca ctatgacccg cttatcaaag
    30961 cgatgggcaa ctggcacgat gacattttcg cttacttcga ccaccccatt accaacgcct
    31021 acaccgagtc actgaacaac ctgattcgtg ttgttaatcg tgttggccgt ggctacagct
    31081 ttgaagcgct gcgagccaag atcctgttta ctgagggctt ccagaagatc aagaagccac
    31141 gctatcagcg tcaacggata cccgagggcg ctatgggcag gatgccgttc tatggcgttg
    31201 ccgaagcggg gccatccact aactacggcg ctgacatatc aacactggtg cgggagattg
    31261 aggcggggcg tttatagccc tgtttcaacc ctgtaatccg gatacccttc ttttctttgg
    31321 tgctggttgt gttgctgctg ctcaggtagc cggtgcgaat ttcggtttat gggaaatttc
    31381 catcgtttgg gggcttggtg tttccatggc aatctacatt tctgccggta tttccggtgc
    31441 tcaccttaac cctgcggtca ctatagcact tgccgcattc tacggctttg aaaagcataa
    31501 aattttgccc tatgtcatcg cccaagttgc cggagcgttt tgctctgtcg cactgattta
    31561 ttttatgtat agcgatctct ttactgccgc cgaagccgct caaggcatta ctcggggcga
    31621 aactgttggc tttgccggtg tgttctccac ctatccaaac cctaatatta cattggttac
    31681 cgccttcatc gttgaatttg tgattactgt ggtgttgatg tccactattt tagcgattgg
    31741 cgatgataaa aacggcttgc cgaataaagc cttagccgca ttactcatcg gtttattgat
    31801 tgcggtaatt ggtggagcaa ccggcccgtt aaccggcttt gcgatgaacc cggctcgtga
    31861 ttttggtccg aaactctttg cttatcttgc cggttggggt gaaattgctt taacaggcgg
    31921 aaaagaaatt ccgtatttca tcattccgat tgtcgcccca atctgcggtg cattattcgg
    31981 tgcttggggt tataaaaacc tcattcataa caatcttcca gcaaatactc aggagtaatc
    32041 tatggaaaaa caatatatca tcgctctcga ccaaggtaca accagctctc gtgcggtttt
    32101 attagataaa aatgccaatg tggttgaagt ggctcagcgt gaatttaccc a
//
LOCUS       DANLTI010000011        30058 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.011, whole genome shotgun sequence.
ACCESSION   DANLTI010000011 DANLTI010000000
VERSION     DANLTI010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30058
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.011"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(141..353)
                     /locus_tag="PXB09_000436"
     CDS             complement(141..353)
                     /locus_tag="PXB09_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232585.1"
                     /translation="MSIVIVDTDFVVHKEDEEWTTEEIKMIEEHLLEEQSAQYQVKRE
                     VPKQFYADIAERLSRGDLTAWEQLDG"
     gene            540..3125
                     /gene="leuS"
                     /locus_tag="PXB09_000437"
     CDS             540..3125
                     /gene="leuS"
                     /locus_tag="PXB09_000437"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDL5232586.1"
                     /translation="MQQQYNPSEIEPKVQRYWAENKVFKAVKDVTKEKYYCLSMLPYP
                     SGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAVKNNTAPAKWTY
                     ENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCP
                     NDETVLANEQVHEGCCWRCDTPVEQREIPQWFIKITDYAEELLNQLDNLPQWPDQVKT
                     MQRNWIGRSEGVEITFKIAGSNVELPVYTTRPDTFFGVSYVAIAAAHPLAELAAQNNP
                     ALAEFIREAKNTKVAEAELATMEKKGMATGLFAIHPLTGKEVPVWVANFVLMHYGTGA
                     VMAVPAHDERDFEFAQKYDLQINQVIQPLDGSEWDFSKAAYTEHGKLINSAEFDGLEF
                     DVAFTAIADKLEAMGVGKRQVNFRLRDWGVSRQRYWGAPIPMMTTEEGEVVTVPLQDL
                     PVILPEDVVMNGVQSPIKADPEWAKTTYNGKPALRETDTFDTFMESSWYYARYTCPQY
                     HEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATKLLCQ
                     GMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSKSK
                     NNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRVWNLVYSYAQ
                     NPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKLTKAP
                     LETEQDKAVMAEALSAVVRMLYPITPHICFELWQVLGNEQTIDFAPWVQADESAMVED
                     EKLVVVQVNGKVRGKITVSATATEDEVKAIAKADPNVAKFLDGQQIVKEIYVPFKMLS
                     FAVKA"
     gene            3325..3813
                     /locus_tag="PXB09_000438"
     CDS             3325..3813
                     /locus_tag="PXB09_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232587.1"
                     /translation="MIKKLSLIAVFALTACGWHFKNNEVLPESFRTLTFESADQHSEM
                     SRILRNQLQLSDVKLVPSTANVAKLRLVSTSTDSKVVSVFKQAREAEKILTLNVDAIA
                     DIPNKGQYPLEVSVHRTFFDDSRAALAKSAEKEMIMKDMYEQASRQLIIKMAGLKKEL
                     SK"
     gene            3856..4881
                     /gene="holA"
                     /locus_tag="PXB09_000439"
     CDS             3856..4881
                     /gene="holA"
                     /locus_tag="PXB09_000439"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDL5232588.1"
                     /translation="MQKIFPETLQFSLNKGLQPFYLLTGNDLLLVNETKDAIIHTARL
                     NGFDEKKEVEIKNDTNWEELFEAAQSMGLFFARQIMVLNFPDSPTATQFKKLAELCAF
                     IHSDLLFILHLPKFSKTMEKQAWFTQIELNLVQINCQTPELSKLPQWVSHRAKAMNLQ
                     IENEANQLLCYSYEGNLLALKQALQLLQLNATDGKITLTKAQEVVEHSAQFTPFQWID
                     ALFEGKIQRAQRILYHLQNEEVQAVVLLRIVQKELMILLEITRNPTAVVSSEQSLFIG
                     NLRTEFDRLKIWQNRRPFYNQITQRLTYQKLYALIQQLAELERKVKQEFSDDIWQELE
                     RFSAQFT"
     gene            complement(4882..5067)
                     /gene="yacG"
                     /locus_tag="PXB09_000440"
     CDS             complement(4882..5067)
                     /gene="yacG"
                     /locus_tag="PXB09_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDL5232589.1"
                     /translation="MPETIVNCPTCEKEVVWSKESKYRPFCSERCQIIDLGDWAAEKH
                     SIASEEAELFSEDLEKY"
     gene            complement(5049..5684)
                     /gene="coaE"
                     /locus_tag="PXB09_000441"
     CDS             complement(5049..5684)
                     /gene="coaE"
                     /locus_tag="PXB09_000441"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDL5232590.1"
                     /translation="MTYVVGLTGGIGSGKTTVSDLFSALGVEVIDADVVARQVVEPGT
                     PLLAKIVEHFGEEILTAEKALERTKLRQIVFNNEEEKTWLNNLLHPAIREEMVKKLQE
                     STACYVIWVVPLLIENKLTEYCDRILVVDVSPEIQLERATKRDNSKIETIKNIMAAQV
                     SREERLSYADDVIENNLPFEQGLLLIKEQVQALHYKYLALAKKEKECQKLL"
     gene            complement(5720..6376)
                     /locus_tag="PXB09_000442"
     CDS             complement(5720..6376)
                     /locus_tag="PXB09_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDL5232591.1"
                     /translation="MLILFSLFIAVWLKAEIPRFAIRVNRQIYQETTSLVNIGLTEQQ
                     FLAQSVLQPKQPRSANLFFLLFPLIMLCSESPIIGTIFILLCFLSLLDMCYYLTDIRY
                     LVLIFLLVLWESLADFQHQTFTFTLAFCLLIGLVSQLMFKKEAFGSGDMLLLVALSPL
                     FRLEKMLLLILTASLLGIGYYLAYWLMKKQKLAKLAFIPFISTAMLLVLMLESRGINY
                     "
     gene            complement(6379..7575)
                     /locus_tag="PXB09_000443"
     CDS             complement(6379..7575)
                     /locus_tag="PXB09_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDL5232592.1"
                     /translation="MTKIYEFHWQAQSRFGQKQRGKRLATNRDMLENLLLAQGYQHIR
                     ISRNFVLSANPKKEEVNSLLSQLALLVNSAMPLKQALSMLLQNCRNIRLYLWLNELIQ
                     HIESGYAFSQSLEKLGEFVTNQEIQLIKMGEQSGKLGIMLTNLAESRAKLEKLAKKVK
                     KILFYPVIVLLISLALSIGLLVLIVPQFAQLYGSKDKTLPLITDILFTLSECLIEQGT
                     VLLGTLLLAVIFYLFFAKKSRLVAKWKMALWAKMPLFSRIIEQSRIIFFSQNIALMLN
                     AHIPLDVALRSFLSEKNDDPILQQEIGTMLNLLQQGYKFSQGINPNVFGAEMAQMLEV
                     GEKSGNVAKMCEHISEMYQQKLDYQIDILSQLLEPMLMLIMGVIVGTIIVGLYLPIFD
                     MGALVE"
     gene            complement(7572..8024)
                     /locus_tag="PXB09_000444"
     CDS             complement(7572..8024)
                     /locus_tag="PXB09_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HDL5232593.1"
                     /translation="MEYSVTDLNSQRFIEISAEQWQKNCNEKQILLRYLAIPLQETEE
                     QLWLGIDDMQNLNACEIFAFIYHKQIEPVLISSDELKFLLNALSPEQSSRQSEIYEEN
                     TAYSLAHSEQVDRNDPIIQILENLFKFCLQHNASDIHFEPQKEKLLRQ"
     gene            complement(8045..8524)
                     /gene="ppdD"
                     /locus_tag="PXB09_000445"
     CDS             complement(8045..8524)
                     /gene="ppdD"
                     /locus_tag="PXB09_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDL5232594.1"
                     /translation="MQKIVHFRPLGIRQLHRAFTLIELMIVIAIIAILATIAIPSYNS
                     YTQKAALSELLQASASYKSDVEVCIYNSGGLDNCSGGTNGIQANKTSSNTTKYLNSIA
                     VTKGVITVTGKGSLNGYGYTLTPSFSNNTISWTASCSGNDTSLFPANFCSTTVTPNG"
     gene            8705..10084
                     /gene="radA"
                     /locus_tag="PXB09_000446"
     CDS             8705..10084
                     /gene="radA"
                     /locus_tag="PXB09_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDL5232595.1"
                     /translation="MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEVRLISSKE
                     AAKSDRFSGYAGETSGKVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGH
                     PGAGKSTLLLQVMCGLAQHLPTLYVTGEESLQQVAMRANHLGLPTANLKMLSETSVEH
                     ICNIADQEKPKIMVIDSIQVMHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVG
                     HVTKDGTLAGPKVLEHAIDASLLLEGESDSRFRTLRSQKNRFGAVNELGVFAMTEQGL
                     KEVKNPSAIFLSRSEEQTPGSSVMVLWEGTRPLLVEIQALVDHSMLANPRRVAVGLDH
                     NRLSLLLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALILALISSFRNRPLPQD
                     LVIFGEVGLAGEIRPVTSGQERISEAAKHGFKRAIIPHGNVPKKAIKDMQVFTVKKLS
                     DALDILYNL"
     gene            complement(10139..10369)
                     /locus_tag="PXB09_000447"
     CDS             complement(10139..10369)
                     /locus_tag="PXB09_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDL5232596.1"
                     /translation="MDYVEILGYVAMILVACSFLLKDVIKLRVVNSLGCACFVVYGLL
                     IGSIPVTGLNALVVCINLYYISKGNRPTAAHS"
     gene            complement(10489..10983)
                     /gene="folA"
                     /locus_tag="PXB09_000448"
     CDS             complement(10489..10983)
                     /gene="folA"
                     /locus_tag="PXB09_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HDL5232597.1"
                     /translation="MKISIIVARTINKVIGKDNQMPWHLPVDLAWFRQNTLGKPVIMG
                     RKTYESIGRLLPKRPNIILSRSGFTVEGAYAVQSLEQAVELAKNFANTAEIMIIGGGE
                     LFKQALPLAERLYLTEIQADIEGDTFFEFDEQNWALVEEKWSEIDENNPFRCRFMCLE
                     RKSV"
     gene            11059..11214
                     /locus_tag="PXB09_000449"
     CDS             11059..11214
                     /locus_tag="PXB09_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl kinase"
                     /protein_id="HDL5232598.1"
                     /translation="MATLFLVTSEQIMSKTIVIKFGTSTLTHGTKSLSRPYMLELVKL
                     NYTNSIV"
     gene            11211..12179
                     /gene="proB"
                     /locus_tag="PXB09_000450"
     CDS             11211..12179
                     /gene="proB"
                     /locus_tag="PXB09_000450"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5232599.1"
                     /translation="MIVVTSGAAAAGRDYLGHPELPKTLASKQMLAAVGQSQLIRVWE
                     NLFDIYNIHIGQMLLTRADLDDRERFLNARDTLDALLAQKIIPVINENDAVATEEFKV
                     GDNDNLSALVAILAQADQLYLLTDQEGLFSADPRSNPDAKLLSVVEKITPEIRQIAGG
                     SSTGLGTGGMSTKITAADIATRSGVETIIASGSRPNVLVDLANGQNIGSKFLVQSDRL
                     EGRKRWLFAAPQVGEIVVDFGAEQALLQHKSLLPVGVSAIKGEFTRGEVIKIFSQDGK
                     ALALGIARYSSEALLRIKGKKSKEIESLLGYEFGSVAVHSDEMVVY"
     gene            12179..12943
                     /locus_tag="PXB09_000451"
     CDS             12179..12943
                     /locus_tag="PXB09_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDL5232600.1"
                     /translation="MELGIDVLAILFAVATLAGFIDAIAGGGGLLTIPALMAAGLPPA
                     MALGTNKLQACGGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFL
                     KTLLPFLILIIGIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFM
                     TLAFILLLGFNLSKAVAHAKVINFTSNFASLIFFTLGGAVMWKIGLIMMVGQFIGGTL
                     GAKMVMTKGKKLIRPMLVTMSFMMVGKMLYEQGIFN"
     gene            12946..13578
                     /gene="nth"
                     /locus_tag="PXB09_000452"
     CDS             12946..13578
                     /gene="nth"
                     /locus_tag="PXB09_000452"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDL5232601.1"
                     /translation="MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATD
                     KGVNKATDKLFPVANTPQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNG
                     EVPEDRDALEALAGVGRKTANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVE
                     EKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEKTE"
     gene            13775..15025
                     /locus_tag="PXB09_000453"
     CDS             13775..15025
                     /locus_tag="PXB09_000453"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDL5232602.1"
                     /translation="MDIYLVGGAVRDQLLGLPVKDRDFLVVGATAEQLLAQGFQQVGA
                     DFPVFLHPETKEEYALARQERKNGNGYNGFICDFSPNVTLEQDLIRRDLTINAIAQDE
                     NSTLFDPYGGVQDLENRLLRHVSPAFSEDPLRVLRVARFAARFHSFGFTIAPETLKLM
                     REMVQSGELKHLTAERVWLETQKAFETDNPHVYFDILRLIGALKVLFPELDRLFGVPQ
                     PPQHHPEIDSGKHTLMVLQQAKRLAKKAENPTALLFAALCHDLGKGLTPADILPHHYG
                     HEVKGIQPTRELANRLKIPTEIKDFALLVTEYHTHCHKMAELRPETVIKLFNSLDVWR
                     KPNRFFDFLFACEADARGRLGFEQRNYPQPELAKKYYQAAIEIDVQQVIQDGFEKQAI
                     REELNKRRVYAVRSIKLDSDLINH"
     gene            complement(15126..16061)
                     /locus_tag="PXB09_000454"
     CDS             complement(15126..16061)
                     /locus_tag="PXB09_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDL5232603.1"
                     /translation="MSESKPFPITTGFFAMPLGLGALGLAWLNATPITPYATTIGNII
                     AGTSVILWVALLGCYVYRVFFCFEQIKAEFMHPVQCCLFSLVTMTTMISGDVLYVWDF
                     YLGELLIFLGVIVHLIFLVFIIGGLWKGTQFLPETLHPVHYLPPIAGSFTMASSLSLI
                     GYSEIASLFLGIGIISWLVYEPTMLQRIRLSPLFPIARPSLGIVLAPAFVGASAYFSM
                     GGELDLLAKMLWGYGFLQFCFILRNLKWIAENGFSMGFWAFSFGLAAMARGAIEFYQF
                     EPLSFIGLAGFTIANFGIGLLLIFTLKLWLQQSRA"
     gene            complement(16190..16384)
                     /gene="iscX"
                     /locus_tag="PXB09_000455"
     CDS             complement(16190..16384)
                     /gene="iscX"
                     /locus_tag="PXB09_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDL5232604.1"
                     /translation="MKWTDTRMIAENLYDMNPDLDPTTVRFTDMHKWICEMEDFDDDP
                     EASNEHILEAILTIWLEEYE"
     gene            complement(16384..16725)
                     /gene="fdx"
                     /locus_tag="PXB09_000456"
     CDS             complement(16384..16725)
                     /gene="fdx"
                     /locus_tag="PXB09_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDL5232605.1"
                     /translation="MPKIVFLPHEEFCPEGMVVEAKAGDNLLEVAHEAGVEIHHACDC
                     SCACTTCHVVIREGFDSLNDTSDQEEDMLDKAWGLEIDSRLSCQCIVGEEDLVVEIPK
                     YNLNHANEAAH"
     gene            complement(16744..17109)
                     /locus_tag="PXB09_000457"
     CDS             complement(16744..17109)
                     /locus_tag="PXB09_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 51 family protein"
                     /protein_id="HDL5232606.1"
                     /translation="MSNYVKTEISEQFRTVAVEFDLEDNRIFELGERINTEYDVAYMN
                     GYNWAAFLRAYLSIYRPSLLELLEEDPDVGCYYVTYPLSEKSKEKARELKKIIVYLVE
                     NEEEILNFIGEHLDNIEWD"
     gene            complement(17119..18972)
                     /gene="hscA"
                     /locus_tag="PXB09_000458"
     CDS             complement(17119..18972)
                     /gene="hscA"
                     /locus_tag="PXB09_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDL5232607.1"
                     /translation="MALLQISEPGQTAAPHQHKLAVGIDLGTTNSLVATVRSGQTQVL
                     LDEQERALVPSVVHYAETEKTVGIEAFAKAALDPKNTVISAKRLIGRSLADVQQRYQN
                     LPYQFVASENGLPLIQTAQGNKSPIEVSADILSHLAQFAEKRLAGELSGVVITVPAYF
                     DDAQRQSTKDAARLAGLNVLRLLNEPTAAAIAYGLESGQEGVIAVYDLGGGTFDLSIL
                     RLRKGVFEVLATAGDTALGGDDFDHLLAEWIAEQANYKPQTASEQRELLTLATQTKVA
                     LSQAVEFEVKFANWTGVVSRSQFNELIQPLVKRSLMTCRRALKDAGVEAEEVREVVMV
                     GGSTRVPFVREQVGEFFGKTPLTSIDPDKVVAIGAAVQADILVGNKPDSDMLLLDVVP
                     LSLGIETMGGLVEKIIPRNTTIPVARAQEFTTGKDGQTAMTIHVLQGERELVEDCRSL
                     GKITLRGIPAMAAGVAQVRVTYQVDADGLLNVTAMEKSTKVQASIQIKPSYGLTDEEV
                     TQMIKSSMANAKEDMEARQLVEQRVEADRVIDSVVTALKEDGSAVLSVEEFQAIEAQL
                     ARLIELKEGTDRFAIQQGIKEVDLATQEFAARRMNLSIQKALAGKKMDDLA"
     gene            complement(19288..19629)
                     /locus_tag="PXB09_000459"
     CDS             complement(19288..19629)
                     /locus_tag="PXB09_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDL5232608.1"
                     /translation="MKAILCQRAKQLRTNMTEAEKVLWQALRAKRFLAIKFKRQQVIG
                     NYIVDFVCFSAKLVIELDGSQHLDQQNYDNLRTHFLNGQGFRVLRFWNNQIHSDLEAV
                     LDTIFYEITRG"
     gene            complement(19777..20409)
                     /locus_tag="PXB09_000460"
     CDS             complement(19777..20409)
                     /locus_tag="PXB09_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 family protein"
                     /protein_id="HDL5232609.1"
                     /translation="MKNLEQLLDKQSAWLILRDWFTQAKNHYEILASYPEDAGSALVG
                     MQLSTRSPLGAMVYETGGVFIDHGWLRILGSGNEKLPRGLFDWNFGKTFKQSGEQPSH
                     LLVADDAIGGYFAINAGGIGSDLGKVYYYHPKAKKWENTQLGYSEFLGWALAGDLNHF
                     YQDLRWENWQTDVEKLQGHQVLDLTSKIAVPIERHYQGEFAPENMGYSVA"
     gene            complement(20463..20984)
                     /gene="hscB"
                     /locus_tag="PXB09_000461"
     CDS             complement(20463..20984)
                     /gene="hscB"
                     /locus_tag="PXB09_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HDL5232610.1"
                     /translation="MNNPFTLFDLPVQFQLDNAQLSERYLALQKQLHPDNFAHKSSAE
                     QLEAVQKSADVNEALNILKDPILRAEAMIEIHTGEAKNLEEKSMRDVDFLMQQLEWHE
                     KLETIEHRKDETELTVFLKQIKAEQKAVLEQLEQTLNTADWQKANALTDKLRYFKKLI
                     IQIEKVEEKFFDY"
     gene            complement(20994..21317)
                     /gene="iscA"
                     /locus_tag="PXB09_000462"
     CDS             complement(20994..21317)
                     /gene="iscA"
                     /locus_tag="PXB09_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDL5232611.1"
                     /translation="MSITLTEAAANRVRTFLENRGKGIGLRLGVKTSGCSGLAYVLEF
                     VDVLNEDDQVFEQHGVKVIVDEKSLTYLNGTQLDFVKEGLNEGFKYTNPNVKNECGCG
                     ESFSV"
     gene            complement(21426..21809)
                     /gene="iscU"
                     /locus_tag="PXB09_000463"
     CDS             complement(21426..21809)
                     /gene="iscU"
                     /locus_tag="PXB09_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDL5232612.1"
                     /translation="MAYSEKVIDHYENPRNVGTFDKEASDTGTGMVGAPACGDILRLQ
                     IKVNDQGIIEDARFKAYGCGSAIASSSLITEWVKGKSLEEAGAIKNSDIAEELELPPV
                     KVHCSILAEDAIKAAIADYKEKQAK"
     gene            complement(21936..23156)
                     /locus_tag="PXB09_000464"
     CDS             complement(21936..23156)
                     /locus_tag="PXB09_000464"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HDL5232613.1"
                     /translation="MKLPIYLDYAATTPMDERVAKKMMEYMTKDGIFGNPASRSHKFG
                     WEAEEAVDVARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITVKT
                     EHKAVLDTCRQLEREGFEVTYLDPEEDGILDLAKLKAAIRPDTILVSVMHVNNEMGVI
                     QPIKEIGAICRAKKIIFHVDATQSVGKIEVNVQDLNVDLMSFSSHKLYGPKGIGGLYV
                     CRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMARLTVLRDR
                     LYNGFKDIEEVYVNGSMEEGKRIGSNLNISFNFVEGESLMMSLRDIAVSSGSACTSAS
                     LEPSYVLRAIGRDDELAHSSIRFTLGRWTTEEEIDHTIEIVKKAIVKLRELSPLWEMF
                     KEGVDLSKIEWNHH"
     gene            complement(23211..23663)
                     /gene="iscR"
                     /locus_tag="PXB09_000465"
     CDS             complement(23211..23663)
                     /gene="iscR"
                     /locus_tag="PXB09_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDL5232614.1"
                     /translation="MKLTSKGRYAVTAILDIALHGKLEPVSLADISDRQAISLSYLEQ
                     LFAQLRRDGIVQSVRGPGGGYQLGKKPEEISVGMIISAVNENIDVTKCKGSGNCRKDS
                     QCLTHSLWERLEDQIEQFLGTISVADLAAEHADHDCEKEHCHDHPHHH"
     gene            24011..25492
                     /locus_tag="PXB09_000466"
     CDS             24011..25492
                     /locus_tag="PXB09_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDL5232615.1"
                     /translation="MKMKNFSKTLIASLVAFSSAGASAAAFQLAEISTSGLGRAYAGN
                     AAVADNASVVATNPALMTLFKQTEISAGGIFVDADVNIDGKLNATGADASHKNVIPTA
                     IVPNAYIVSPINERLSIGGGVNVNYGLISEFDPNYSAGFLGGRTSLSAVNVNFSAAYD
                     LGYGFVLGAGLNAVHAKAELGRFLGAGAARFAPAKQFLEDKKVQVQSAIQGLKALEAG
                     IAAGNTALEAQKTQVLAQVNGLLKSQNLNQTITNSAQLERLVNGIQNTNASSTIHKLK
                     GDKWALGWNVGLVYNINERNRLGFTYHSEIDLKFKGKYSNTVPVVIPKMVDTITGGAE
                     IDGTLRLRLPAFWEVSGYHKLTDKLAAQYSYKRTDWSKFQSLEAYDMQGNRLLHKTEN
                     FNDSQRIALGLSYDVNEMLTLRTGVAFDESASVTHPSISIPDTDRAWYSVGATVRFTP
                     NLSADVGYSHLRGSNLTFSEDGLATFKSKARANLYGLNVNYKF"
     gene            25559..26113
                     /locus_tag="PXB09_000467"
     CDS             25559..26113
                     /locus_tag="PXB09_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDL5232616.1"
                     /translation="MKSQIYYDYYPSPIGQLLLLATEEGLIYIELGQEQQTTSLDNFL
                     SAQAASGQILEIFCKTKEILDRYFAGEPLDFQQLDFLAPQGTPFQQSVWKILREIPYG
                     QTTTYGEIATQLGKPSAMRAVGGAVGRNPISILVPCHRVLGKNQALTGFGGGLPNKRF
                     LLQLEDITYKDKGIEFVKPKTKKW"
     gene            complement(26209..28059)
                     /locus_tag="PXB09_000468"
     CDS             complement(26209..28059)
                     /locus_tag="PXB09_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5232617.1"
                     /translation="MQVKKFSQKYINWVLKLGRLKASLLGFFMVALSAILIQSSLTYL
                     FIGRVVVVDILRSIAFGLISAPFVLYFFTLLVEKLEISRLKLEKAVRDLEELREQDAY
                     LNAKLEKNSRDKSILMATISHELRTPLNGIIGLSQILLDDKTTEKQQEYLKTINMSAT
                     ALAHIFGDIIDLEKIDSSRIELVRKEVEFEQLIHDIANFGHFMAGNKQINFEVKYPPD
                     LPKYIYIDHARLSQILWNLISNAVKFTPASGRILLEIYQLDKEQFSFAVTDSGIGIPE
                     KDQRKIFDMFYQAENSKEKKAQGSGIGLSVSKRIAKLMGGDLVVASQENQGSTFTLTV
                     QAESTETKPIFAIQQHSLKVLLVEDIEMNVVVARAMLEKIGCVVDVAMSGEETFQHFA
                     QNSYDLILLDIQLPDTTGFEIAQQLRLQYENEEIDYLPLLVALTANVIQSRQEYQAQG
                     MDDVLHKPLSLDELMRCLNQHFGDDFLQKNEEKQPLVERGSENLPYSITILNELIGVM
                     GKENVLANMDLFADLMPTYLANLQRYLSDWQTTNSVESRKLTADEAHKIKGALASVGL
                     HQLQQTAQLAQSDNGEQWEQNIAHWVEMICSKWQMDLQLAKEYVRSKGDI"
     gene            complement(28114..29118)
                     /locus_tag="PXB09_000469"
     CDS             complement(28114..29118)
                     /locus_tag="PXB09_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5232618.1"
                     /translation="MPGDANKIISNGTSAGGALSTLLGASADHYDYEPYLKEAGALNA
                     SDKIFAVSAYCPITNLENADMAYEWQFNGVNEYSRIDMSRLNAAEFNDRSKPKPKPKI
                     EGSLNEAEIKVSNELAERFPTYLNSLHLVDEKGNPLTLDPKGNGSFKDYLSEVVKTAA
                     NKAYRGLVQDSEEQKAFQQISWLSFEKGKVSSVDWFGYVFSDKRMKSPPAFDALNGSS
                     GENNLFGTDTENNRHFTLYSAERSANKDLNLADPQIVKRMNPMHYLDNPNAAEHWRIR
                     VGTADRDTSLAISAILAIKLQMAGKNVNYETPWNVPHSGDYDVNELFLWADELVKGKK
                     "
BASE COUNT         8966 a         6480 c         5695 g         8917 t
ORIGIN      
        1 gctttctgaa acgtaaatcc ttgcgaaatg cgacacctgc ttttggataa aactgtaaac
       61 cattgatgat attcgtttga gtatgctccg aaaataatcc atagaaaata aactctaata
      121 gattattttt aaaatcaaca ctaaccatct aactgctccc aagcagttaa atctcctcgt
      181 gataaacgtt cagcaatatc agcataaaat tgtttcggta cttccctttt tacttggtat
      241 tgagctgatt gttcttctaa taaatgttct tctatcatct tgatttcttc tgttgtccac
      301 tcttcatctt ctttatgtac aacaaaatcg gtatctacaa tcacaataga catacctagc
      361 tccttcaagt actggttata tattctgtat tttgcctgtt ctaaattcag ctgtctagct
      421 tttctgttac tcacaatttg caaatttttc atcaaattcc accgcttgcc attcaaaaaa
      481 aggcgttttt gcggtatcct atcggcaatt ttttcagtta aatttaaagg ttaaatttta
      541 tgcaacagca gtataaccca agtgagattg aacctaaggt tcagcgttat tgggcagaaa
      601 ataaagtttt taaagcagtt aaagacgtta ccaaagagaa atactattgc ctttcaatgt
      661 tgccttatcc gtcaggtaag ctacatatgg ggcacgttcg taactacacc attggtgatg
      721 tagtgtctcg ttatcagcgt atgatcggta aaaatgtatt acagccgatg ggttgggacg
      781 ctttcggttt accggcggaa ggtgctgcgg tgaaaaataa taccgcaccg gcaaaatgga
      841 cttacgaaaa catcgaatat atgaaaggtc agcttaaaat gttgggcttc tcttatgact
      901 gggatcgtga agtcaccact tgccgtccgg aatactacaa atgggagcaa tggttcttca
      961 cagaacttta taaaaaaggc ttagtgtata aaaaaacctc aaccgtaaac tggtgtccga
     1021 atgatgaaac tgtgcttgcc aacgagcaag ttcacgaagg ttgttgctgg cgttgtgaca
     1081 ccccagtgga acagcgtgaa attccacaat ggtttatcaa aatcactgac tatgctgaag
     1141 aattactcaa tcagttagat aatctcccac agtggccgga tcaagtaaaa accatgcaac
     1201 gcaactggat cggtcgttcc gaaggggtag aaatcacctt taaaattgcc ggttcaaacg
     1261 tagaattacc ggtttacact acccgtccgg ataccttctt cggcgtaagc tatgtggcga
     1321 ttgctgcggc tcacccatta gcagaattag ctgcacaaaa taacccggca ttggctgaat
     1381 ttatccgtga agcgaaaaac accaaagtgg cagaagcaga attagccacc atggagaaaa
     1441 aaggaatggc aaccggcttg ttcgccattc acccgttaac aggaaaagaa gtaccggttt
     1501 gggttgctaa ctttgtgtta atgcactacg gtacaggtgc ggtaatggcg gttccggctc
     1561 acgatgagcg tgactttgaa tttgcacaaa aatacgattt gcaaattaat caggtaattc
     1621 aaccgcttga tggctcagag tgggatttca gcaaagccgc ttacaccgaa cacggtaaat
     1681 taatcaactc tgccgagttt gacggcttgg aatttgatgt ggctttcact gcgattgccg
     1741 ataaattaga ggcaatgggt gtaggtaaac gccaagtgaa tttccgtctg cgtgactggg
     1801 gtgtttctcg tcaacgttat tggggtgcac caatcccaat gatgaccaca gaagagggcg
     1861 aagtggttac cgttccatta caagatttac cggtgattct ccctgaagat gtggtaatga
     1921 acggcgtgca aagcccaatc aaagccgacc cagagtgggc gaaaaccact tacaacggca
     1981 aaccggcatt gcgtgaaacc gataccttcg atacctttat ggagtcctct tggtattatg
     2041 cacgttatac ttgcccacaa tatcacgaag gaatgttaga ttcagacgag gcaaactact
     2101 ggctaccggt cgatcaatat atcggcggta ttgaacacgc cacaatgcac ttgctctact
     2161 tccgtttctt ccataaattg ttgcgtgatg cgggtatttt aaattcggac gaaccggcga
     2221 ctaaactgtt atgccaaggt atggtgcttg ccgatgcgtt ctactacacc agcccaacta
     2281 acgagcgtat ttgggtcagc ccgacacaag tcaccttaga acgtgatgag aaaggtcgta
     2341 tcatcaaagc aaccgatcca caagggcgtg agctggttca cagcggtatg actaaaatgt
     2401 cgaaatcaaa gaacaacggt atcgatccgc aagaaatggt ggaaaaatat ggtgctgaca
     2461 cagttcgctt gtttatgatg tttgcctccc ctgcggaaat gacattagaa tggcaagaat
     2521 ccggcgttga aggggcaaaa cgtttcttag gtcgtgtttg gaatttagtt tatagctatg
     2581 cccaaaatcc ggcaacgact gcattagatg tgaatgcctt agacaaggat caaaaagaac
     2641 ttcgccgtga tgtacacaaa acgattgcta aggtgagtga tgatattggt cgtcgtcaaa
     2701 ccttcaatac agcgattgct gcggtgatgg aattgatgaa caagctcacc aaagccccac
     2761 ttgaaaccga acaagataaa gccgtaatgg cagaagcttt aagtgcggtg gtgcgtatgc
     2821 tttacccaat cacgccacat atctgctttg agttatggca agtgttaggt aatgaacaaa
     2881 ccatcgattt tgccccttgg gtacaagccg atgaatccgc aatggtggaa gatgaaaaat
     2941 tagtggtagt acaagtcaac ggaaaagtgc gtggcaaaat cactgtttca gctactgcta
     3001 cggaagatga agttaaagct atcgctaaag ccgatccaaa cgttgctaaa ttcttagatg
     3061 gtcagcagat tgtaaaagaa atctacgttc catttaaaat gttgagcttt gcggttaagg
     3121 cgtaacaaac acactctccc ttatatggga gagagaccga taaatatttc gtgcagaaat
     3181 atttatcaga gagagggtac aagcggttat tttcttggaa aattttgcaa aaaatagccc
     3241 cctctccctg ctttttcttc taaacgaaga aaaacctgtc cctctcccac aaggggagag
     3301 gggaataaac aaggaaatct cattatgatt aaaaaactct ctctcatcgc tgtttttgct
     3361 cttaccgcct gcggttggca ctttaaaaac aatgaggtat tacctgaatc gttcagaaca
     3421 ttaacctttg aaagtgcaga tcaacacagc gaaatgtctc gaattttacg caatcagtta
     3481 caactaagcg atgtaaaatt agtgcctagc acggctaatg tggcaaaatt acgtttggtt
     3541 tcaacctcaa cagacagcaa agtggtttct gtgtttaaac aagctcgtga agcagaaaaa
     3601 atcttaacgc taaacgttga tgcgattgcc gatattccaa ataaagggca atacccttta
     3661 gaagtttcgg ttcatcgtac tttctttgat gactctcgtg cagctttggc aaagtctgct
     3721 gaaaaagaga tgattatgaa agatatgtat gaacaagcct ctcgccaatt aattatcaaa
     3781 atggcgggct taaaaaaaga actctcaaaa taatcattgt aggggcgaaa tatgtttcgc
     3841 ccattgttta tctgtatgca aaaaatcttt ccggaaacac ttcaattttc attaaacaaa
     3901 ggactacagc ccttttatct attaacaggg aatgatctgc tattggtgaa tgaaaccaaa
     3961 gatgccatta ttcacaccgc ccgtctcaac ggttttgatg aaaaaaaaga agttgaaatc
     4021 aaaaacgata ctaactggga agaacttttc gaagcagctc aatcaatggg attgtttttt
     4081 gcacgccaaa ttatggtgct gaattttccg gattccccca cagcgacaca gtttaaaaaa
     4141 ctggctgagc tttgtgcctt tattcatagt gatttgctct ttatcctgca cttacctaaa
     4201 ttttccaaaa caatggaaaa acaggcttgg ttcacgcaaa ttgagctaaa tctcgtgcaa
     4261 attaactgcc aaacaccgga acttagcaaa cttccacaat gggtcagtca tcgagcaaaa
     4321 gcgatgaatt tgcaaattga aaatgaagca aaccaactcc tttgttatag ctacgaaggc
     4381 aatctactgg cgcttaaaca ggcattacaa ctgctacaac tcaatgcaac tgatggaaaa
     4441 atcacgctga caaaagccca agaagtggtt gaacactccg cccaatttac tccatttcaa
     4501 tggattgatg cattatttga aggaaaaatc caaagagctc aacgcatttt gtaccatctg
     4561 caaaatgaag aagtacaagc ggtcgtttta ttaagaattg tgcaaaaaga gttgatgatt
     4621 ttactcgaaa tcactcgcaa cccaaccgca gtcgtttcca gcgaacaatc actttttatc
     4681 ggtaatttac gaacagaatt tgaccgcttg aaaatttggc aaaaccgcag acctttttac
     4741 aaccagatca ctcaacgact gacttaccaa aaactttacg ccctaatcca acaactggct
     4801 gaattagagc gtaaggtgaa acaagaattt agcgatgata tttggcaaga attagagcgt
     4861 ttttccgctc aatttaccta actaatactt ttctaaatct tcgctaaaca actccgcttc
     4921 ttcactggcg atagagtgct tttctgccgc ccaatcgcct aaatcaataa tttgacaacg
     4981 ctcgctacaa aacgggcggt atttactttc tttactccac accacttctt tttcacaagt
     5041 cgggcagttt acaatagttt ctggcattct ttttcctttt ttgctaatgc taagtattta
     5101 taatgtaagg cttgaacctg ctctttaatt aaaagcaagc cctgttcaaa tggcaagtta
     5161 ttttcaatca catcatcagc ataacttaat ctttcttcac ggctgacttg ggctgccata
     5221 atatttttaa tggtttcaat tttactgtta tcacgtttgg ttgctctttc cagttggatt
     5281 tcaggagaaa catcaacaac caatatacga tcacaatatt cggtgagctt attttcaatt
     5341 aaaagcggca cgacccaaat cacataacaa gcggtcgatt cttgcaattt ttttaccatt
     5401 tcttctcgaa tggcggggtg aagtaaatta ttgagccacg ttttttcctc ttcattgtta
     5461 aacacaattt ggcgaagttt agtgcgttct aatgcttttt cagcggttaa gatctcttca
     5521 ccaaaatgct ctacaatctt ggctaaaagc ggtgtacccg gttcaacaac ttggcgagcc
     5581 accacatcag catcaattac ctctacccca agagctgaaa ataaatcaga cactgtggtt
     5641 ttgccactgc ctattccacc ggttaagcct acaacgtaag tcataaaaat tgattcctca
     5701 aaataaaaac aaaccaattc tagtaattaa tccctctgct ttcaagcatt agcaccagca
     5761 acatcgctgt gctaataaac ggaataaacg ccaattttgc taatttctgc tttttcatta
     5821 gccaataagc caagtaataa ccaatcccta gcaggctggc ggttaatatc aataagagca
     5881 ttttttcgag ccgaaagagt ggggataacg caaccaataa caacatatcg cccgagccaa
     5941 atgcctcctt tttaaacata agctgtgaaa ccaagccaat caacaggcaa aaagcaaggg
     6001 taaaggtaaa agtttggtgt tggaaatcgg ctaaactctc ccataacacc aacaaaaata
     6061 taagcacgag gtagcgaata tccgttaggt aatagcacat atccagcagt gataaaaaac
     6121 agagcagaat aaaaatcgtg ccgataatag ggctttccga gcagagcata atcaatggaa
     6181 aaaggagaaa aaatagattt gccgatcggg gttgtttcgg ttgtagcacc gattgagcca
     6241 aaaactgttg ctcggttaag ccaatattca ctaatgaagt tgtttcttgg taaatttggc
     6301 gattgactcg aatggcaaat cgagggatct ccgctttgag ccaaaccgca atgaagaggg
     6361 aaaacagtat taacatcgct actccaccaa agcccccata tcaaaaatcg gtaaatacag
     6421 cccaacaata atagtgccga caatcacgcc cattatcaac attagcatcg gttctaatag
     6481 ctgagacaaa atatcaattt ggtaatctaa tttttgttgg tacatctcac taatatgctc
     6541 acacattttc gccacattgc cacttttctc cccaacctca agcatttgtg ccatctcagc
     6601 accaaacaca ttcgggttga tcccttgtga aaatttgtag ccttgttgta acaaattaag
     6661 catagtgcca atttcttgct gtaaaatcgg gtcatcattt ttctcggata aaaacgacct
     6721 caaggcaaca tcaagcggaa tatgagcatt cagcattaag gcaatatttt ggctgaaaaa
     6781 gataatgcga gattgctcaa taattcggct aaacagtggc attttagccc atagagccat
     6841 tttccacttt gcgactaacc tgctcttttt tgcaaaaaac aggtaaaaaa tgaccgctag
     6901 tagtaacgtg ccaagtaata ctgtgccttg ctcaatcaag cattcggaaa gggtaaataa
     6961 aatatcggta atgaggggta aagttttgtc ttttgagcca taaagttggg caaactgcgg
     7021 tacaatcaaa accaatagcc cgatagataa agcgagcgaa atcagcaaca caatcaccgg
     7081 gtaaaacagg attttcttca cttttttcgc caatttttcc aatttcgctc ggctttcagc
     7141 taaattagtc agcataatgc ccagttttcc gctttgttcg cccattttga ttagctgaat
     7201 ttcctgattg gtcacaaatt cacccaattt ctccaacgat tgtgaaaaag catagccact
     7261 ttcaatatgc tgaatcagct cattaagcca tagataaagg cggatatttc ggcagttttg
     7321 caacaacata gataatgcct gttttaacgg catggcagaa ttaaccaaca atgcaagctg
     7381 tgatagcaag ctattcacct cttctttttt cgggtttgct gaaagcacaa aatttcggct
     7441 aatccgaata tgctgataac cttgtgccag caaaaggttt tccaacatgt ctcgattcgt
     7501 tgccaaccgc ttgccccgct gtttttgccc aaatcggctc tgggcttgcc aatgaaattc
     7561 atagattttc gtcattgcct aagcaatttc tctttttgtg gttcaaaatg aatatctgag
     7621 gcgttgtgtt gcaaacagaa cttaaataaa ttctctaaaa tttggataat cggatcgttt
     7681 ctatccactt gttccgaatg agccaatgaa tacgccgtat tctcctcata aatctcactc
     7741 tgccgactac tctgctcagg cgaaagggca ttgagtaaaa acttcaattc atcggaggaa
     7801 atcaaaacag gctcaatctg tttgtggtag ataaacgcaa aaatctcaca ggcattgaga
     7861 ttttgcatat catcaatccc tagccaaagc tgttcttctg tttcttgcag cggaatggct
     7921 aaatatcgca ataaaatctg cttttcattg caatttttct gccactgctc tgctgaaatc
     7981 tcgatgaacc tttggctgtt taaatccgtt accgaatact ccattttgat ttcctcacct
     8041 caaattagcc gtttggtgta acagttgtgc tacagaaatt agctggaaat aggctcgtat
     8101 cattgccact acaacttgcc gtccaactaa tcgtattatt tgagaacgac ggtgttaagg
     8161 tatagccata accattcaga gagcctttgc cggttaccgt aatcacgcct tttgttaccg
     8221 caattgagtt taggtattta gtggtattac tactggtttt attcgcctga atcccattcg
     8281 tgccaccgga gcagttatcc aacccgccac tgttgtaaat acagacttca acgtctgatt
     8341 tatacgaagc agatgcttgt aataactccg ataacgccgc cttttgggtg tatgagttat
     8401 aggaagggat cgcaatagtg gcaagaatgg caataatcgc aatcacgatc atcaactcaa
     8461 tgagggtaaa tgcccgatgc agttggcgaa tgccaagcgg tctaaaatgt acaatttttt
     8521 gcatataaat tccttataaa ttgcaccaac aaattgtggc gaatcaagtg tgcaaatttt
     8581 ttgcctgctt tgcgaccggc aaattttaat ttttcgacgc agatcgaaaa aataaaattt
     8641 ttatctgttt atccatacag ttttttgtta gaatttgcca aatttactca attaggaatc
     8701 aagaatggca aaagcaccta aaaccgctta tgtttgtaac gattgcgggg ctgaatattc
     8761 ccgttggatg gggcaatgta aggaatgtaa ggcttggaat accatcagtg aagtgcggtt
     8821 gatttccagc aaagaagcgg cgaaatctga ccgctttagc ggctatgccg gtgaaacgtc
     8881 aggcaaagta caaacgctgt ctgacatcag cttgcaggaa gtgcctcgct ttagcagtgg
     8941 ctttaacgag ctggatcgtg tactcggtgg cggcgtagtg ccggggtcag caattctgat
     9001 cggcggtcac ccgggggcgg ggaaaagtac gttattactg caagtaatgt gcggtttagc
     9061 ccaacatctg ccaacgctgt atgtcaccgg tgaagagtcg ttacaacaag ttgcaatgcg
     9121 ggcaaatcac ttaggcttac caacggcaaa tctgaaaatg ttgtctgaaa cctctgtcga
     9181 gcatatttgc aatattgcag atcaagaaaa gcccaaaatt atggtgattg actcgattca
     9241 ggtgatgcac ttgtcggata ttcagtcctc acccggcagt gtttcacaag tgcgtgaatg
     9301 tgcatctttc cttacccgct acgccaaaac ccgccaagtg gcgattatta tggttgggca
     9361 cgtcactaaa gatggcacgc ttgccggccc gaaagtgttg gaacacgcca tcgatgcttc
     9421 cttgctgtta gaaggcgaat ccgattcccg tttccgtact ttgcgtagcc agaaaaatcg
     9481 ttttggtgcc gtcaatgaat tgggcgtatt tgcgatgacc gaacaagggc taaaagaggt
     9541 taaaaaccca tctgcgattt ttttaagccg tagcgaagag caaacgccgg gcagttcggt
     9601 gatggtgtta tgggaaggaa cacgcccatt gttggttgaa attcaagcct tagtcgatca
     9661 ctcaatgctg gcaaaccctc gccgtgtggc ggttggctta gatcataacc gtttatcgct
     9721 attacttgcg gtgctacacc gacacggtgg cttgcagatg tcggatcaag atgtgtttgt
     9781 aaatgtggtc ggtggggtga aagtcacgga aaccagtgcc gatttagcct taattttggc
     9841 gttaatttcc agcttccgta accgtccatt gccgcaagat ttggtgattt ttggggaagt
     9901 cggcttagca ggggaaatcc gcccggttac cagtgggcaa gagcggatca gcgaagccgc
     9961 aaaacacggc tttaaacgag cgataattcc tcacggcaat gtcccgaaaa aggcaattaa
    10021 agatatgcag gtgttcaccg tgaaaaaact cagtgatgcg ttagatattc tgtataatct
    10081 ctaaaatcaa gaaccgcttg taagtctgtc ttacaagcgg tctgttttag gtaaaaattt
    10141 acgaatgtgc ggcagttggt ctattgcctt tggaaatata gtataaatta atacacacca
    10201 ccaacgcatt taagccggtg accggaatcg agccaatcag caaaccataa acaacgaaac
    10261 aggcacaacc cagcgaattc accacccgca gtttaatcac atcttttaat aaaaaagaac
    10321 aggcaactaa aatcatcgcc acatagccga gtatttcaac atagtccatt tagaacctcc
    10381 tcaaataaaa taaactgccg atattttaaa ggctgttttt ttatttgtat ctagctctaa
    10441 aaatagcaaa ggtttgcgtt cacattttta cttttaaccg cttagttatt aaacagattt
    10501 tcgttctaaa cacataaaac ggcaacggaa agggttattt tcatcaattt ctgaccactt
    10561 ttcttctact aacgcccaat tttgttcatc aaattcaaag aacgtatccc cttcaatgtc
    10621 tgcttgaatc tcagttaaat aaagtctttc tgctagtggt aaggcttgct taaacagttc
    10681 ccccccacca ataatcatta tttcagctgt atttgcaaaa tttttcgcta attcaaccgc
    10741 ttgttcgagc gattgtaccg cataagcccc ttccaccgta aaacctgaac gggaaagaat
    10801 aatattaggg cgttttggca ataacctgcc gatagattca taggttttcc gccccataat
    10861 caccggtttg ccgagcgtgt tttggcgaaa ccaggctaaa tctaccggca aatgccacgg
    10921 catttggtta tctttgccaa tcaccttgtt gattgttcgg gcaacaataa tgctgatttt
    10981 cattttttct cctgttatgc aaattggttt gattttatat caaattaagc gtgattttac
    11041 accctaaaag tgatactttt ggcaacatta tttttagtta caagtgaaca gattatgtca
    11101 aaaactatcg tgataaaatt tggcaccagc actctcacac acggcactaa aagtttaagc
    11161 cgtccttata tgttagagct ggtaaagctc aattacacca acagcatcgt gtgattgtgg
    11221 tgacatccgg agctgccgct gccggtcggg actatttagg acaccctgaa ctccctaaaa
    11281 ccttagcctc taagcaaatg ttagcagcgg tcgggcaaag tcagctcatt cgagtgtggg
    11341 aaaatttatt cgatatttat aatatccata tcgggcagat gctcttaacc cgagccgatc
    11401 tggacgatcg tgaacgtttc ctcaatgccc gtgataccct tgatgccctg cttgcacaaa
    11461 aaatcattcc ggtgattaat gaaaacgatg ccgttgctac cgaagaattt aaagtaggcg
    11521 ataacgataa tttatcggct ttagttgcga ttttggctca agcagatcag ctctatttat
    11581 taaccgacca agaaggctta ttcagtgccg atcctcgctc aaaccctgat gctaaattgc
    11641 tctcggtggt ggaaaaaatc acgcctgaaa tccgccaaat tgccggtggt agttcaaccg
    11701 gtttaggcac gggcggaatg agtaccaaaa ttactgctgc tgatattgct acccgctccg
    11761 gtgtggaaac catcatcgcc tccggttctc gcccaaatgt gttagttgat ttagcaaacg
    11821 ggcaaaacat cggcagtaaa tttttagtcc aatctgaccg cttggaaggc agaaaacgct
    11881 ggttatttgc tgctccgcaa gtgggtgaaa ttgtggtaga tttcggggcg gaacaagcct
    11941 tgcttcaaca taaatcatta ctgccggtgg gagtttctgc catcaaaggc gaatttactc
    12001 gaggtgaagt aatcaaaatt ttcagccaag acggcaaagc cttagcactc ggcattgccc
    12061 gttatagcag tgaggcattg ctgcgaatta aaggtaagaa atcaaaagaa attgaatcgc
    12121 tccttggtta tgaatttggt tctgttgcag tgcatagtga cgaaatggtg gtgtattaat
    12181 ggaattggga attgatgttt tagcaatctt gtttgccgtt gcgacccttg ccggctttat
    12241 cgatgccatc gctggcggcg gtggcttact cactattcct gcattaatgg cagcagggct
    12301 tcctccggca atggcacttg gcacgaataa attacaggcg tgtggcggat cactctcttc
    12361 ctcactctat tttattcgca aaaaagctgt taatttaaaa caaatttggt tgctaattct
    12421 atgcactttt ttaggctctg ccgccggtac tatttttgtg caaatgatca atgtcgattt
    12481 cttaaaaaca ttgttgcctt tcttaattct gattatcggc atctattttt tggtcagccc
    12541 taaaattggc gatgaagatc gtaaacaacg cattagcttt accctatttg cctttaccgc
    12601 cgctgtcgct ctcggttttt atgatggaat gttcggaccg gcaaccggct cttttatgac
    12661 tctggcattt attttgctgc tcggcttcaa cctctctaaa gccgtagcac acgccaaagt
    12721 gattaatttt acctccaact ttgcctcatt aattttcttt acgcttggtg gtgcggtaat
    12781 gtggaaaatc ggcttaatta tgatggtcgg gcaatttatt ggcggcacac taggtgcgaa
    12841 aatggtgatg acaaaaggca aaaaattaat ccgtccgatg ctagtgacta tgtcttttat
    12901 gatggtcggc aaaatgctct acgagcaagg aatttttaat taacaatgaa taaagcaaaa
    12961 cgtattgaga ttttaacccg tttacgcaat gaaaatccaa aaccgacaac tgaactcaat
    13021 tacagtaatc cgtttgaatt attaattgcc gtgattctat ccgcccaagc gaccgataaa
    13081 ggcgtaaata aagccaccga taagctcttc cctgtcgcca acacgccaca agcgatttta
    13141 gatttaggcg tagatgggct aaaagagtac atcaaaacta tcggcttatt taacagcaag
    13201 gcagaaaata ttatcaagac ctgccgagat ctgatcgaaa aacataacgg cgaagtgcct
    13261 gaagacagag atgccctcga agcccttgcc ggtgttggca gaaaaaccgc caatgtggtg
    13321 atgaataccg cattcggaca ccctacgatt gcagtcgata cccatatttt cagggtgtcg
    13381 aaccgcacga acttcgctcc cggcaaaaat gtagttcagg tagaagaaaa actgctcaaa
    13441 gttgtgccgg acgaatttaa agtcgatgtt caccattggt tgattttaca cggacgctac
    13501 acttgcattg cccgtaagcc tcgttgtggt tcttgtatta ttgaagattt atgtgagttt
    13561 aaagagaaga cggaataaca ttatctggtg gtatttaatg aataactccc ctctttagaa
    13621 aagtaggggc tgggggagat ttgatactat ttcaacattt cgtatgagcg tatagaaatt
    13681 ctgccaaatc ttccctatcc cctctttgct aaagagggga actagatcga gcgtaaaata
    13741 taacaagcgg tcattttttt gagatttttt gcaaatggat atttatttag tcggtggagc
    13801 agtgcgggat caacttcttg ggctgccagt gaaagataga gattttttag tggttggcgc
    13861 aactgccgaa caacttttag cccaaggatt tcaacaagtt ggggcagatt ttccggtgtt
    13921 tttacaccct gaaaccaaag aagaatatgc ccttgctcgc caagaacgca agaacggcaa
    13981 tggttacaac ggctttattt gcgatttctc cccaaacgtc acgcttgagc aagatttgat
    14041 ccgccgagat ttaaccatta acgccatcgc ccaagatgaa aacagcacac tttttgatcc
    14101 ttatggcggt gtgcaagatt tagaaaatcg gctactccgc cacgtttctc ctgcattcag
    14161 cgaagatccg ctacgggtgc tacgggttgc ccgctttgcc gcccgttttc attcatttgg
    14221 ttttaccatt gctcctgaaa ccctgaaatt aatgcgagag atggtacaaa gcggtgaatt
    14281 gaaacattta accgctgaac gtgtgtggtt ggaaacacag aaagcctttg aaaccgataa
    14341 tccgcacgtt tattttgaca ttttacgctt aattggggca ttaaaagtgc tattccctga
    14401 actggatcgt ctgtttggcg taccacaacc acctcaacac caccctgaaa ttgactccgg
    14461 caaacacact ctaatggtgc tacaacaggc aaaaagactt gcaaaaaaag cggaaaatcc
    14521 gaccgcttta ctctttgcag ccctttgcca cgacttaggc aaaggcttaa cgcctgctga
    14581 tattttgcct catcactacg gacacgaagt caaaggcatt caaccaaccc gagagttagc
    14641 caatcggtta aaaatcccaa ctgagattaa agattttgcc cttttagtga ccgaatacca
    14701 cacgcattgc cataaaatgg cggaacttcg ccctgaaacg gtaataaaac tgtttaacag
    14761 cctagatgtg tggcgtaaac caaaccgctt ttttgatttc ctgttcgcct gtgaagcgga
    14821 tgctagaggg cgattaggtt ttgaacagcg gaattacccc caacctgaat tggcgaaaaa
    14881 atattaccaa gccgcaatcg aaattgatgt gcagcaagtt attcaagacg gttttgaaaa
    14941 acaagcaatt cgggaagagc tgaataaacg cagagtgtat gcggtaagaa gcatcaagct
    15001 agatagcgac ctaataaacc attaggttat ccgccacttt ctcaaaatca attcccaaag
    15061 ttcaagttgg ttaaatgtat ggattcttta aaaggtggcg ttattttagt gaatttataa
    15121 tgttcctatg ctcttgattg ttgtagccac aatttcaggg taaagatcag caataaccca
    15181 atgccgaaat tggcaatagt gaagccggct aacccaataa aagataaagg ttcaaattga
    15241 taaaattcaa tcgcacctct tgccattgca gctaaaccaa atgaaaatgc ccagaaaccc
    15301 atcgagaagc cattttcagc tatccatttg aggtttcgta aaataaaaca gaattgtaag
    15361 aatccatatc cccataacat ttttgccaac aagtctaatt ctccacccat agaaaaatag
    15421 gcagaagcgc ccacaaatgc cggagcaaga acaattccta aagatggtct agcaatcgga
    15481 aaaagcggac taagccgaat tctttgtaac atagtgggtt catatactaa ccaggaaatt
    15541 atgccaatgc ctaaaaataa agatgcaatt tcactgtagc caattaagct taatgaactt
    15601 gccatagtga agctccctgc aattggcggt aggtaatgta ccgggtgtag cgtttccggc
    15661 aaaaattgtg tgcctttcca taatccacca ataataaaaa ccaagaaaat taaatgcaca
    15721 atgacgccta aaaaaatcaa tagttcgcct aaataaaaat cccatacata gagcacatca
    15781 ccgcttatca tggttgtcat tgtcactaag gaaaataaac aacattgcac tgggtgcata
    15841 aattctgctt taatctgctc aaaacaaaaa aacacacgat acacataaca gcctaataag
    15901 gctacccaaa gtatgactga cgttccagca atgatattac caattgttgt agcataagga
    15961 gtgataggcg ttgcatttaa ccaggcaagg cctaacgccc ccagccctaa tggcattgca
    16021 aaaaagcctg tagttattgg aaaaggttta gattcactca taaatttatc ctcatattga
    16081 aataatgcat aactgtattc ggctttataa cagtcatatg taaaaaattt tatttttcta
    16141 accgcttgta ataagaaaaa cctaaagcac ttgctttagg ttcctactac tattcatact
    16201 cttctagcca gatagttaaa atcgcttcaa gaatatgttc atttgatgct tccggatcat
    16261 catcgaaatc ttccatttca caaatccatt tatgcatatc tgtaaaacga accgtggtcg
    16321 ggtctaaatc cgggttcata tcatacagat tttcagcgat cattcgggta tctgtccatt
    16381 tcattagtgc gctgcctcat ttgcgtgatt taaattatat tttggaattt caacaaccaa
    16441 atcttcttca ccaacaatac attggcaact taaacggctg tctatttcca atccccaagc
    16501 tttatccagc atatcttctt cttgatctga agtatcattt aacgaatcaa aaccctcacg
    16561 aattaccacg tggcaagtgg tacaagcaca agaacagtcg caagcgtgat gaatttcaac
    16621 gcctgcttcg tgtgctactt ctaataaatt atctccggct ttagcttcaa caaccatacc
    16681 ttccgggcaa aattcttcgt gtggaagaaa aacaattttt ggcattttaa agtttcctta
    16741 ttactaatcc cattcaatat tatccagatg ttcgccgatg aagtttaaaa tctcttcctc
    16801 attttcaacc agataaacaa taatcttctt taattccctt gctttctctt tacttttctc
    16861 ggaaagcgga taggtaacat aataacatcc tacgtccgga tcttcttcta ataactctaa
    16921 taggcttgga cgataaatac taagataagc ccgtaaaaat gcagcccagt tataaccgtt
    16981 catataggca acatcatatt cagtattaat ccgctcgccc aactcaaaaa tgcggttatc
    17041 ctctaaatcg aattcaaccg caacggttct gaattgttct gaaatctcgg tttttacata
    17101 gttagacata ctgcctcctt atgctaaatc gtccattttt ttaccggcta atgctttttg
    17161 aattgataaa ttcatacgcc gtgctgcaaa ttcttgcgta gctaaatcca cctctttgat
    17221 accttgctga attgcaaagc gatcagtacc ttcttttaat tcgattaaac gggctaattg
    17281 tgcttcaatc gcttggaact cctccacact caacactgca gagccatctt ctttcaatgc
    17341 cgttaccacg ctgtcaatca ctcggtcggc ttctactcgc tgttcaacta actggcgggc
    17401 ttccatatct tctttggcat ttgccattga ggatttaatc atctgcgtaa cttcttcatc
    17461 ggttaagcca taagacggtt tgatttgaat tgaagcctgc actttggtcg atttttccat
    17521 tgcagtcacg tttaataaac cgtctgcatc aacttggtaa gttacccgaa cctgtgcaac
    17581 ccctgctgcc attgccggaa tgccacgcaa agtgatttta ccgagagagc gacaatcttc
    17641 gactaattca cgctcacctt gtaaaacgtg gattgtcatc gccgtttgac cgtctttacc
    17701 ggtagtaaac tcttgagctc gagctactgg gatagtagtg ttgcgtggaa taattttctc
    17761 caccaaacca cccatcgttt caataccaag cgaaagtggc acaacatcaa gcaacaacat
    17821 atcggaatcc ggtttgtttc caactaaaat atccgcctgc actgccgcac caatggcaac
    17881 aactttatcc gggtcgatag aggttaatgg cgttttaccg aaaaactcgc cgacttgttc
    17941 acgcacaaac ggtacacggg tcgaaccgcc taccattacc acttcacgaa cctcttctgc
    18001 ttcaactccg gcatctttca aggctcggcg acaagtcatc agcgagcgtt ttacaagcgg
    18061 ttgaattagc tcattaaatt gcgaacggct tactacgcct gtccaatttg caaatttcac
    18121 ttcaaattca accgcttgcg aaagtgcgac tttggtttga gttgccaaag ttaataattc
    18181 acgctgctcg cttgccgttt gaggtttgta atttgcctgt tcagcaatcc attccgctaa
    18241 taggtggtcg aaatcatcgc caccgagtgc ggtatcacct gcggttgcta atacttcaaa
    18301 cacacctttg cgtaaacgca aaatagataa atcgaaagta ccgccaccta aatcgtaaac
    18361 ggcaatcaca ccttcttgtc cgctttctaa accataagca atcgctgctg ccgttggttc
    18421 attgagcaaa cgtaatacat ttaaacccgc aagacgtgcg gcatctttgg tactttggcg
    18481 ttgtgcgtca tcaaaataag ccggtacggt aattaccacg cctgaaagct caccggctaa
    18541 acgcttttcg gcaaattgtg ccaagtggct taaaatatcc gccgaaactt caatcgggct
    18601 tttattacct tgcgctgttt ggattaaagg taaaccgttt tcgctcgcga caaattgata
    18661 aggtaaattt tgataacgtt gctgaacatc tgccagagaa cgcccaatga gacgtttagc
    18721 tgaaatgacg gtatttttcg ggtcaagtgc agctttggca aaggcttcaa tcccaactgt
    18781 tttttctgtt tccgcataat gcactactga cggcactaat gctctttctt gttcatcaag
    18841 caatacctga gtctgcccgc tacgcacagt tgccactaat gaattggttg tacctagatc
    18901 aattcctacc gctaatttat gttgatgtgg tgcagcggtt tgaccgggtt cagaaatttg
    18961 taataatgcc atttatttat ctctttatct ttctaactta gttctctatt gtattaaatg
    19021 gagtgaaata tattgtttaa gagaagctgg agattcccct ctccctgatt tttcttctga
    19081 acgaagaaaa atctatccct ctcccacaag gggagagggt tattctttca aaaattcaaa
    19141 acaactaaaa aattagcatt ctccttttgt aggagaaaat gttgttcttt caaaattcta
    19201 aaataaccgc aaaattaact ctcgcccctt gtgggagaga gacagataaa tcattcgttc
    19261 agaatgattt atcagagaga ggggaaatta ccctctcgta atttcataaa aaattgtatc
    19321 taaaacagcc tctagatcgc tatgaatttg attattccaa aatcttaaaa ccctgaaccc
    19381 ctgaccgttt aaaaaatgag ttcgtagatt atcatagttt tgttgatcta aatgttgtga
    19441 accatctaat tcaataacta atttcgctga aaagcaaaca aaatcgacaa tatagttacc
    19501 tataacttgt tgccgtttaa attttatcgc taaaaatcgt tttgctctta atgcttgcca
    19561 aagaaccttc tctgcttctg tcatattagt ccgaagctgt ttagctcttt ggcataaaat
    19621 tgctttcatt ttttattcct cttttttaat ttagtataaa aggaataaaa aatataattt
    19681 gagcgatttt tgtgatctaa atcgaaaatc agaaaatttc tttcgttcta aaaaaataag
    19741 ctaaacagcc tatatttcag cctctcttac aaacacttaa gccaccgaat atcccatatt
    19801 ttcaggggca aattcgcctt ggtagtggcg ttcaatcgga acggcgattt tacttgtaag
    19861 atccagcact tgatgccctt gtaatttctc tacatcggtt tgccagtttt cccaacgcaa
    19921 atcctgataa aaatggttta aatctccggc taatgcccag cctagaaatt ctgaataacc
    19981 taattgggtg ttttcccatt ttttagcttt tggatgataa taataaactt tgccaagatc
    20041 tgagccgatt ccgccggcat taatggcaaa atagccaccg attgcatcat ccgctaccag
    20101 caagtggctt ggttgttcgc cagattgttt aaaagttttg ccaaagttcc aatcaaataa
    20161 gcctcgaggc aatttttcgt tgcctgagcc taaaatgcgt aaccaaccgt ggtcaataaa
    20221 tacgccaccg gtttcataca ccattgcccc tagcggtgag cgagtagaaa gttgcatacc
    20281 aaccaatgca ctgccggcat cttcagggta actcgctaaa atttcgtaat gatttttggc
    20341 ttgggtaaac cagtctctta aaattaacca agccgattgt ttatctaata attgttctaa
    20401 atttttcatt tgcaaaattt ccttagaatt tgaccgcttg cgaaaaccat acaaatgtag
    20461 gattaatagt caaagaattt ttcttctact ttctcaatct gaataattaa ttttttaaag
    20521 taacggagct tgtcggttaa cgcattggct ttttgccagt cggctgtatt taacgtttgt
    20581 tcaagctgtt ctaatactgc tttttgttcc gctttaatct gttttaaaaa gacggtcagt
    20641 tcggtttcgt ctttacgatg ctcaatggtt tccagttttt cgtgccattc gagttgctgc
    20701 attaagaaat ccacatctcg catacttttt tcttcgagat ttttggcttc acctgtatgg
    20761 atttcaatca tcgcttctgc ccgtaaaatc ggatctttaa gaatattgag tgcctcattg
    20821 acatcagcag atttttgcac cgcttctaac tgttcagcac ttgatttgtg ggcaaagtta
    20881 tctgggtgaa gctgtttctg taaagcaaga taacgctcag aaagctgggc gttatcaagt
    20941 tgaaattgaa cgggtaaatc aaataaagta aaagggttat tcattacagt tccttacaca
    21001 ctaaaacttt cgccacagcc gcattcgttt ttaacattcg ggttggtgta tttaaagcct
    21061 tcgtttaagc cttctttcac aaaatccagc tgcgtaccgt ttaagtaagt caggcttttt
    21121 tcatcgacaa taacttttac gccgtgttgt tcgaaaacct gatcgtcttc atttaataca
    21181 tcaacaaatt caagcacata ggcaagcccc gaacaaccgg aagttttcac accaagcctt
    21241 agcccgatac ctttacctct gttttctaag aatgtacgaa ctcggtttgc ggcagcttct
    21301 gttaaggtaa tgctcatagt tttccttatg tgaatggatt aaatcaagat agaaatagca
    21361 aatgcaagcg gttaaatttt gcaaattttt tgcaaaaatc gaccgcttgc attgattgta
    21421 tcatattact tagcttgttt ctctttgtag tctgcaattg cagctttgat tgcatcttct
    21481 gctaagattg aacagtgaac ttttaccggt ggtaattcta actcttcagc gatatcactg
    21541 tttttaatcg cacctgcttc ctctaatgat ttacctttta cccattcggt aatgagagaa
    21601 cttgatgcga ttgcagaacc acaaccgtat gctttaaagc gtgcatcttc aatgatacct
    21661 tgatcgttca ctttaatttg taaacgtaaa atatcaccac aagccggtgc tcccaccata
    21721 cctgtaccgg tgtctgatgc ttctttatca aaagtcccta cgttgcgtgg gttttcgtaa
    21781 tgatcaatta ctttttcgct atatgccatt tttgtattcc ttttatttcc tatttccggc
    21841 gaaacctatt tcgcccctac attcaattta ctatttgtga tgaaagctta ttttgtaggg
    21901 gcaaatatta tttgcccttg caaaattttt ctgaattagt ggtgattcca ttcgatttta
    21961 gacaaatcta caccttcttt gaacatttcc caaagaggcg aaagctcacg caatttcacg
    22021 atagcttttt tcacgatttc aatagtatga tcgatttctt cttcagtcgt ccaacgacct
    22081 aaagtgaaac ggattgagct gtgagctaat tcatcgtcac gaccgattgc acgtaacaca
    22141 taagatggct ctaaacttgc agaagtacaa gctgaacctg atgatactgc gatatcacgt
    22201 aatgacatca ttaacgattc gccctcaaca aagttaaagc tgatgtttag gtttgaaccg
    22261 atacgtttgc cttcttccat tgaaccgttt acatatactt cttcaatatc tttaaagccg
    22321 ttatataaac gatcacgtaa cacggttaaa cgagccattt ccgttgccat ttcttcttta
    22381 gcgatacgat atgcttcacc catacctaca atttggtgaa caggcaatgt acccgaacgc
    22441 ataccacgct cgtgaccgcc accgtgaata attgcttcta aacgcacacg tggtttacga
    22501 caaacatata gaccgccgat accttttggt ccgtataatt tgtggcttga gaaagacatt
    22561 aaatcaacat ttaagtcttg tacattcact tcgattttac caacagactg ggtcgcatca
    22621 acgtggaaaa tgattttctt cgcacggcag attgcaccga tctctttaat cggttggatt
    22681 acgcccattt cgttatttac gtgcattacc gaaactaaaa ttgtgtccgg acgaatagcc
    22741 gcttttaatt tagctaaatc taaaataccg tcttcttcag ggtctaagta agtcacttca
    22801 aaaccttcac gctctaactg acggcaagta tctaatactg ctttatgttc ggttttaaca
    22861 gtgataatgt gtttaccttt ggtttgatag aaatgagccg cacctttgat ggctaagtta
    22921 tccgactctg ttgcaccaga agtgaaaacg atttcacggc tgtctgcacc gattaaatcg
    22981 gcaatttggt tacgagccac atcaaccgct tcttccgctt cccaaccaaa tttgtgtgag
    23041 cgagaagcag ggttaccaaa gataccgtct ttggtcatat attccatcat ttttttcgca
    23101 acacgttcgt ccattggtgt ggttgctgcg taatccaaat aaattggtaa tttcattgtt
    23161 actcctagtt aaaacaaccc aagcggtcat ttttgataaa aaatttgcaa ttagtgatga
    23221 tgaggatgat cgtgacaatg ctctttttca caatcgtgat cagcgtgttc tgcggctaaa
    23281 tccgcaactg aaattgtccc taaaaactgc tcaatttgat cttctaaccg ctcccacaaa
    23341 gaatgcgtta aacactgaga atctttacgg caattaccac tacctttaca tttggtgaca
    23401 tcaatatttt cattcacggc ggagatgatc atacccacgc taatctcttc cggtttttta
    23461 cctaattgat acccaccacc cggtccacga acgctctgca cgataccgtc acggcgaagt
    23521 tgagcaaaca gttgctctaa ataagacagt gaaatcgctt ggcgatctga aatatcggct
    23581 aagctaaccg gctctagttt tccgtgtaaa gcaatatcta aaatggcggt tactgcataa
    23641 cgcccttttg aggtaagctt cataaaatat cctcattgat tatccagaaa atcttctgaa
    23701 acagttgcta aattttgata taccccacca atttagtcaa tcatttagga ctaattagtg
    23761 taaaaggttt tatatattaa aacagattaa aacaataacg ctgattatac gaaaaaagag
    23821 ccgaaaatac caaaatacca aagataaaca gttcatagac cgcacaattt cactcttatt
    23881 tgctcctaac tgatcggaac agttgaaatt taattgatag agagtacttc gacacataaa
    23941 atctgcactt tcttcttata acttttatga attattcatt ctaaaatata tattttttaa
    24001 gagatttcct atgaaaatga aaaactttag caaaacttta atcgcttcat tagtagcatt
    24061 cagctcagcc ggtgcatctg ctgccgcatt ccaattagct gaaatttcaa catccggttt
    24121 aggtagagct tacgcaggta atgccgctgt agccgataac gcttctgttg ttgcaaccaa
    24181 ccctgcgtta atgacgttat ttaaacaaac cgaaatttct gccggtggta ttttcgtaga
    24241 tgctgatgta aatattgatg gaaagctcaa tgctacaggt gcagatgcct cacataaaaa
    24301 tgtcattcct accgctattg ttccaaatgc ttatatcgtt tcacctatca atgagcgcct
    24361 ttctattggt ggtggcgtaa atgtaaatta tggtttgata tctgaatttg accctaacta
    24421 ttctgctggt ttcttaggtg gtcgtacatc attaagtgct gtgaatgtta attttagtgc
    24481 ggcttatgat ttaggttatg gttttgtatt aggggcaggt ttgaatgcag tacacgcaaa
    24541 agcagaatta ggacgtttct taggtgccgg tgcggcacgt tttgctccag ctaaacaatt
    24601 tttggaagac aagaaagtac aagtacaaag tgcaattcaa ggtttaaaag ctcttgaggc
    24661 aggtatcgca gcaggtaata ccgctcttga agctcaaaaa acacaagtat tagctcaagt
    24721 aaacggttta ttaaaatctc aaaatttaaa ccaaaccatc acgaattctg ctcaattaga
    24781 acgtttggtt aatggcattc aaaataccaa tgcaagttca acaattcata aacttaaagg
    24841 cgataaatgg gcattgggtt ggaatgttgg cttggtttat aatatcaatg aaagaaaccg
    24901 tttaggtttt acttaccact ctgaaattga tcttaaattt aaaggcaaat attctaatac
    24961 cgttcctgta gttattccta agatggtaga taccattacc ggcggtgcag agattgatgg
    25021 tacactaaga ttacgcctac cggcattctg ggaagtgtca ggttaccaca aactaaccga
    25081 taaacttgct gcacaataca gctataaacg cacagactgg agcaaattcc aaagcctaga
    25141 agcttatgat atgcaaggta accgcctatt gcacaaaacc gagaacttta atgactctca
    25201 acgtattgca ttaggcttgt cttatgatgt gaatgaaatg ctaacattgc gtacaggtgt
    25261 agcatttgat gaaagtgcaa gtgtaactca tccatcaatc tcaattccgg acactgatcg
    25321 tgcttggtat tctgtaggtg caaccgtgcg tttcacgcca aacctatctg ctgatgtagg
    25381 ttactcacat cttcgtggta gcaacctgac cttctctgaa gacggtttag ccacattcaa
    25441 gagcaaagct cgtgcaaatc tttacggttt aaacgtaaac tacaaattct aatttgatga
    25501 attaaggttt aaagaggtgt aaaatcaatt acacctcttt ttttattggc ataaaaacat
    25561 gaaatctcaa atttactacg attactaccc aagccctatc gggcaattat tgcttttagc
    25621 cacagaagaa ggcttgattt acattgagct agggcaagag caacaaacca cctcgcttga
    25681 taatttcctt tccgctcaag ctgcaagtgg tcagatttta gaaatttttt gcaaaaccaa
    25741 agaaatttta gaccgctatt ttgccggcga gccattggat tttcagcagt tggattttct
    25801 tgccccgcaa ggcactccat tccagcaatc agtttggaaa attttgcgtg aaatccctta
    25861 cgggcaaact actacttatg gcgaaattgc cacccaacta ggcaagccaa gtgcgatgcg
    25921 agccgtcggc ggtgcagttg ggcgaaaccc gatttcgatt ttagtgcctt gccatagggt
    25981 attagggaaa aatcaagcct taaccggatt cggtggtggc ttgccgaata agcgttttct
    26041 attacagctg gaagatatta cctataaaga taaaggcatt gaatttgtaa aaccgaaaac
    26101 caagaaatgg taaatacgtt ttgatagcac aagcgtccac gcttgtgctt cagatattaa
    26161 aattggtaca agcgtggacg cttgcaccat cgtaacattt caaatttact aaatgtcccc
    26221 cttgcttcta acatattcct tagctaattg caaatccatc tgccatttgg aacaaatcat
    26281 ttccacccag tgtgcaatat tttgctccca ctgctcgccg ttatcggatt gagcaagctg
    26341 agcagtttgt tgtagctgat gtaatccgac tgatgctaat gctcccttaa tcttatgagc
    26401 ctcgtccgcc gttaatttac ggctttccac agaatttgtg gtttgccaat cacttaaata
    26461 acgctgtaaa tttgccaaat aagtgggcat taaatcagca aataaatcca tattggcaag
    26521 cacattctct ttccccatta ccccaatcaa ttcattaaga attgtaatgc tataaggtaa
    26581 attctcagaa cctctctcta caagcggctg tttttcttca tttttttgca aaaaatcatc
    26641 tccaaaatgt tggttgagac aacgcattaa ttcatctaaa gagagcggtt tgtgtagcac
    26701 atcgtccata ccttgtgctt ggtactcctg ccggctttgg atcacatttg ccgtcaaagc
    26761 aaccaacagc ggtaaatagt caatttcctc gttttcatat tgcaatctta attgctgtgc
    26821 aatttcaaaa ccggtggtat ccggcagttg aatatcaagt aaaatcagat cgtagctgtt
    26881 ctgtgcaaaa tgttggaacg tttcttcacc actcattgct acatcaacca cgcaaccgat
    26941 tttctccaac attgctcggg caaccaccac attcatttca atgtcttcta ccaatagcac
    27001 cttaagggaa tgttgctgaa tagcaaatat cggcttggtt tccgtgcttt ctgcctgcac
    27061 agtgagggta aaagttgagc cttgattttc ttggcttgcc accaccaaat caccgcccat
    27121 tagcttcgca atgcgtttcg agaccgataa gccaatcccg ctaccttgcg cttttttctc
    27181 tttagagttt tccgcttggt agaacatatc aaaaattttg cgttgatctt tttccggaat
    27241 accgatgcct gaatccgtca ccgcaaagct aaactgttct ttatctaatt ggtaaatttc
    27301 cagcaaaatt cgaccgcttg caggggtaaa tttcaccgca ttgctgatca aattccataa
    27361 aatttggctc aagcgtgcgt ggtcgatata gatatacttc ggcaaatcag gcggatactt
    27421 cacttcaaaa ttaatctgct tattgcccgc cataaaatgc ccaaaattag caatatcgtg
    27481 aatgagttgt tcaaattcca cctcttttct taccaattca attcggctac tatcaatttt
    27541 ttctaaatca ataatatcgc caaaaatatg agccaatgca gtggcactca tattgatagt
    27601 ttttagatat tcttgctgtt tttcggtggt tttatcatct aacaaaattt ggctcaagcc
    27661 gataattcca ttaaggggag tacgaagttc gtgactaatg gtcgccatta aaatgctttt
    27721 atcacggctg tttttttcta atttagcgtt aagataggca tcttgttccc ggagttcttc
    27781 caaatctctt actgcttttt ctaatttcaa gcgagatatt tcaagttttt ccaccaataa
    27841 cgtgaagaaa taaagcacaa aaggcgcaga aattaaacca aaagcgatgg agcgtaaaat
    27901 atccaccacg actactcgcc caataaaaag ataggttaag ctactttgaa ttaaaattgc
    27961 cgaaagagcg accataaaaa agcctaaaag agaagctttt aaccgcccta gctttaatac
    28021 ccaattaata tatttttggc taaatttttt aacttgcata cgacctcaaa acaaaaagca
    28081 gaccatcaga tctgctttat tttactctat tttttacttt ttgcctttga ctagctcatc
    28141 agcccatagg aataattcat ttacatcata atcacctgaa tggggtacat tccacggggt
    28201 ttcataatta acatttttgc ctgccatttg cagttttatt gctaagattg cagaaattgc
    28261 cagcgaggta tctctatctg ccgttcccac cctaatccgc caatgttccg cagcatttgg
    28321 gttatccaaa tagtgcatcg ggttcatccg tttcacgatt tgcggatcgg ctaaattgag
    28381 atctttattg gcagaacgtt ccgcactata aagcgtaaaa tggcggttat tttccgtgtc
    28441 tgtgccaaat aaattattct cgcccgaact tccatttaac gcatcaaatg caggtggtga
    28501 tttcatccgt ttatctgaaa acacataacc aaaccagtcc acactgctga ctttgccttt
    28561 ctcaaatgaa agccaactaa tttgttgaaa ggctttttgc tcttcgctat cttgaactaa
    28621 acctctatag gctttatttg cagccgtttt taccacttca gataaataat ctttaaacga
    28681 gccgttgcct tttggatcaa gtgttaaagg attgcctttc tcatcaacca aatgcaaact
    28741 gttcaaataa gtcggaaagc gttctgctaa ttcattagaa actttaattt ccgcctcatt
    28801 taacgagcct tcaattttcg gctttggttt tggttttgag cggtcgttaa actctgctgc
    28861 atttaatcga ctcatatcga ttcggctata ttcattgaca ccattaaatt gccattcata
    28921 cgccatatcc gcattttcaa ggttggtaat tgggcaatag gcagaaactg caaaaatttt
    28981 gtcactggca ttcaatgccc ccgcctcttt caaataaggc tcatagtcgt aatgatcagc
    29041 tgaagctcct aacaaagtag ataatgctcc tccggcactg gtgccgttag agataatttt
    29101 atttgcatcg cccggcattt tttcatcatt agcatgcaga taccgcactg ctgattttga
    29161 atcaactacg tagaatcatt caaataacat tcacaaatac atagttatta tgatgtatcc
    29221 agccaataca tccactggga ttttccatcc gaatttcgga caatcctgat cttacacatt
    29281 ctttcagatt tgtaaagtct gaaaatcatt tttatgcttg attttacttg aaagtatcta
    29341 tcttggtctg acattattcc gtcttattac agctctttga acataaaatc gactcatgtt
    29401 tgtttacatt ctaaatatat tttctgttta aatcgcaaag agtttatcaa aagatgaagt
    29461 cgatcatctc atcgcgtctg cctggttcat ttttgcatga tcattgatca tttatggaca
    29521 agatgatatt tataactgtc aatatagtta aaaaaataaa gccataacaa acttaaaaac
    29581 gtctattatg gctataatat caaatagaat tctcctgctt aaataccttt gagacttaga
    29641 tatctaaaaa acactcatca caaaaaggat ttagtacaat ttccaatcta actatcatgt
    29701 attccacata cattataact ataaaactct ctcaaggtga aagctagaaa tttatttttt
    29761 aatcttcaat aagaatgtta ttataaaaat tagcatacac aatattccat atataaaaat
    29821 tattttacta aaattcagat aattagataa caatcctatt ataccaaaag agagcaacat
    29881 agtaaaagaa cataatgtgt taacagtaga cagtatagta cctctttcat tagaagaaat
    29941 agaatggttt aataaaacac ctaaagaagt atcaataatt tcataacata tcaaaattac
    30001 aataaaagct aatactatcc atatgcctcc aaatataaaa gaagcacaca aagaaaat
//
LOCUS       DANLTI010000012        29855 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.012, whole genome shotgun sequence.
ACCESSION   DANLTI010000012 DANLTI010000000
VERSION     DANLTI010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29855
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.012"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXB09_000470"
     CDS             complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXB09_000470"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDL5232619.1"
                     /translation="MNNETLFSKQKWIAYAQLMRFDKPIGTLLLLHPTLWALFIAAEG
                     MPPVAILAIFTLGVIVMRAAGCVINDYADREIDGHVKRTSQRPLATGRVTTTEAKVIF
                     AILLLFAFLLDLMLNRYAFLLSFVAVFLAVIYPFMKRFTHLPQVVLGMAFGWSIPMAF
                     GAVTETLPLECWLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIA
                     LLQFITLILLGLLGVVKDYHIGYFVVLALSATLFIYQCWLTKKRERSECFKAFLNNHY
                     FGLGVFVAILVGIYF"
     gene            complement(1067..1828)
                     /locus_tag="PXB09_000471"
     CDS             complement(1067..1828)
                     /locus_tag="PXB09_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDL5232620.1"
                     /translation="MKQANRHKKIIELVNQLGYVSTEQLVAELNVSPQTIRRDLNEMA
                     ENNLIRRHHGGAAAPSNTENSDYTHRKQFFSHEKNAIAQQVAKLIPNGASLFLDIGTT
                     SEAVALALLSHKNLKVVTNNLNAAHILMQNEDCQITVAGRGLRSDGGLIGEETVRFIN
                     QFRLDFGILGISAVDMDGSMLDYDYHEVQVKRALMECSRQVVLVTDHSKFTRTAIARL
                     GNVKEVNYLFTDQDLPLELQTHLSQSDVIVKICNE"
     gene            complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXB09_000472"
     CDS             complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXB09_000472"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDL5232621.1"
                     /translation="MELTALTALSPIDGRYQDKVASLRPIFSEFGLLKFRVTVEVRWL
                     QKLASHTQINEVPVFSEKANDYLNQIVADFSLEDANRIKTIERTTNHDVKAVEYFLKE
                     KCEALPELQAVNEFIHFACTSEDINNTSHALMLKTAREEVLLPEWKKVIDAVAELAKC
                     YQHIPLLSRTHGQPASPTTMGKEMANVAYRLQRQYKQLENLEILAKINGAVGNYNAHL
                     SAYPEIDWHTFSQEFVESLGVTWNPYTTQIEPHDYIAEFFDCVARFNTILIDFDRDMW
                     GYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGQKLPISRWQ
                     RDLTDSTVLRNLGVGLGYALIAYASTLKGISKLEVNEQHLRDELNQNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDETAMREFIDKLEIPENEKNRLKEMTPASYIGYAVE
                     LVDKL"
     gene            complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXB09_000473"
     CDS             complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXB09_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDL5232622.1"
                     /translation="MADYHDITLAYAGVCQAATLVQQFAHKGMADREAFKCALESLLI
                     TQPESTLSVFGDDLSHLKMGLETALAQTGGGNGKLDTEVGRYWISLLALSQKLNKNPE
                     AKQQLAQRLQQVERQLALYEDNVMADQMIANLAAIYSDIISPLGTKIHVMGMQDYLVR
                     PDIQNKIRASLLAGIRAGILWQQVGGSRWQFLFSRKKIFNQAQKFYRQI"
     gene            complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXB09_000474"
     CDS             complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXB09_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDL5232623.1"
                     /translation="MKSLFPFFALYQTHFGRLLLGVVLAILGLAASIGLLSLSGWFLA
                     ASFLAGNALIFNFFYPSSGVRGLAVGRTISRYFERLVTHDATFRVLANLRASVFKKLI
                     PLSPSGLNRFRNSELLNRLVADVDTLDTLYLNLVSPFVSAVMIIAFMAIGLSFVSVPL
                     MLIICGTLLVLLAVIPTVFYRLGLKLGRNAIQSRANYRSQFIEWVQLNAEFLLFGNLN
                     QMSEKLQQTEQQWLNAQSKESRLSGLSNSLIMLSNGILTCVVIYLVSTSINVPTAKYP
                     EALIALVIFCVMASAEILSPIGIAFLHLGQVITAAERISEITEQQPNVTFGSKAEWQN
                     LSQNQPLVRCENVSFAYYGEQNVLNNLSFKVLKGQKVAILGKTGSGKSTIFQLLNRNY
                     DPTSGQIWLNNCKIDEYSEPMLRSKLVTLSQRVHIFSQTLKDNLLMGNAQATDEQMQE
                     AVRKVGLGHLLETDGLNLWLGEGGRPLSGGEQRRLGLARLLLSSAELVLLDEPTEGLD
                     RETEQQILNLILTHCCDRTLIMITHRQSGLDKFDVVYRIDNGRLVG"
     gene            complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXB09_000475"
     CDS             complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXB09_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDL5232624.1"
                     /translation="MEKQRQRELQKWLKSQQKVIKKYMHLNILLGSFSSLCMIGQMWL
                     IATMLDKMLIGKQSPNSFLVEIMLLFCCFAARAFFIFLRERVGFKAGQTLRLHLRRQI
                     LAKMEAVGPMSIQQKPAGSWATLMLEQVENLHNFYARYLPQQFLSLIVPLLILCFVFP
                     INWAAGAILFATMPLLPLFMILAGMKAVEANQRNIGILSRISGQFLDKLKGLETIRLF
                     GQAEKQTEQIYQSTEDFRISTMDVLKMAFLSSAVLEFFTAVSIAVTAVYFGFIFLGEL
                     DFGYYGTGVTLFIGFFCLMVAPEFYQPMRELGVFYHDKAAAISAADNIETFLKEKVKT
                     QGGNLQENVENQPLVIQAKDCVIFSPQGKALTQALNFELNAHQHIALVGQSGAGKSSL
                     MNMLLGFLPYEGSVTINGTELRDLNLSQWRAKLAWVGQNPQLMHGSLKENILIGNPNA
                     TDSELAKALQLSKADEFVARLGLEHQVQDSNIGISGGQAQRIAIARALLRPYELLLLD
                     EPTASLDMDSEQQVLAALHNLSREQTTLMITHRVEDLTQCDEIWVMKQGQIIQKGRFT
                     ELEHTGFFAELIHNELVHQGEI"
     gene            complement(7602..11699)
                     /locus_tag="PXB09_000476"
     CDS             complement(7602..11699)
                     /locus_tag="PXB09_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDL5232625.1"
                     /translation="MTDENKQTATNQTDSAQEPQATQPKKSKWRFLKHGFCLTFILLL
                     LAILFLCTGYGQRKVLSWVDKFVEPLQLGQVQGSLQDGLQLSDARFVMDGVNVTVGQA
                     DLHIGFSCLLHYEMCLNNLSLKDTEVLIDTTKLPPSQPKEETEPFTELNLPLGISAQN
                     INLENIKVKVDDMDIHLNHFHTALSGKGRAITVHPTQLEGLNLLLALKLDETDTEQAV
                     DFAQKNAKTEALSATNPQEIADKVIQEAVEKTSEKVVEGFHQLQRKTVAQAEQVDNKV
                     DWAAIKAQLAQPLLDKNIRFSLPLDLNIEQIDIANVAIAQKAKDEKGNLIEPISLLNV
                     ASLQLQAQAKDQHINLKSLDFKSDQGDLTASGSLSLQDNYPLSWTLSGHEAKTAKVKL
                     PFNQIEASLSGELYDKTSLKVKTAGAISASLEGNVALAQAKTPFDLSLKSESMRYPFA
                     PQQNGDVLSLENIAMRLNGNLLDYALEAKVSAKGMGVPASSASLTGKGELTHFNIQDL
                     SLNTLEGTAKIDGLVDWSEGVAWRSNLKLQHINTKSLLADWPAVLSGSLSSEGYAGRG
                     NSASGWKADVSNIDIKGSLLQKNLHLSGNLKADHQQLLDVPGLSLVYGENKIDLKGVL
                     GEKSDFYADIKAPNLQGLVPNLKASVNGNAKLSGKVSEPNIDLDLVASNVGYEQFKLQ
                     NLTAKGKITTEKTIQGDLTLGLRQFAYNEIKVGNATLLLKGNEENHSLKLSAKGNPVG
                     ADLQISGKFDRLKEIWEGQLSQVSIQSTEFGQFQADKAVNVKYDNKAINANISAHCWH
                     NRKINLCFPTAFNAGVEGKVPFEIRNFDLAVLQQFLEKNSQLSGIVNAKGDAAWFKNK
                     QPQVNLDLTSNAIKFIQKMEGGKSFPLTVSPLKIDLKMSDNNLTLKSDLRVENNGRLS
                     TDLVMKDLSKARALSGNIHLDQLSLKLIRPLLERGDSVDGNVNARLTVSGTATSPLLH
                     GNLNVTELKARSVTMPFDITGGNLAMNFHGATSTLSGKLQTKQSELRLEGDADWRDLN
                     AWKTRVHAQANRFQVDIPNIAKVAVSPDIQVTATPTLLTLSGNVDIPWARIEVEQLPE
                     SAVSVSGDEVIMDGSVKNKVPFSQRNIPAQTSGGMAINADIKINIGNDVKLKAYGLNS
                     NVNGLLSVRQGKQGLGLYGQVHLREGRFAAYGQDLLIRKGDISFAGSPSQPTLDIEAI
                     RNPEAMEDPTITAGVRVTGLADNPTVKVFSDPAMSQNEALSYILTGRSLESSGDTSSS
                     NAVAAALLSMSLSKSSKLVGDVGSTFGLKDLSVTTAGIGDNTKVEVSASLAPKFRVKY
                     GVGIFAPLTELTLRYNLTPRLYLQWVSSINQAVDLMYRFEFDELF"
     gene            complement(11780..13615)
                     /locus_tag="PXB09_000477"
     CDS             complement(11780..13615)
                     /locus_tag="PXB09_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDL5232626.1"
                     /translation="MNTKLHFLTFCCLVAFASMAQANQEQRLSDVDRERVENLQEKLA
                     EDSDDEPEIEPLVTLEVKGIQGKDAKKNVELYLDQIANEYADGSERYQYLVQTTVDKA
                     LRALGYYNSRYQFVQLPQEGKKPLLVLNVELDKETVKIDETDIVLQGDAKTDEDFAHL
                     VSKAPKQGSRLNHKTYDNFKGDIESTAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYD
                     SGKRYHYGQIRFVDSQIKEEYLQNILKIHSGEPYLANDLSILTQDYLSSNWFSSVMVE
                     SHLNEQDKLVDLNVLFQPKKRNEVEIGIGYETEVGPRLQLNWKKPWLNSRGHSIESRT
                     YVSKPEQTFEFGYNIPLREDPLHYYYQLSGTLENEDQNDTKSTAATLGLQRFWTHETG
                     WSFSVGLKARYDSFTQANDRFKTLLVYPTASLNRTRTDGKPYPLWGDTQKLTVNWGSR
                     AVGSDVNFYSYKASTSWARTYFDNHRFYLRAELGYLKANQFERIPPALRYFAGGDMSV
                     RGFGYKDISPRDPSNGKRVGGSHLATGTVEYQYQVYPNWWGAIFYDAGLASNKFKTQD
                     LYYGTGLGVRWASPIGAIKFDVATPVKSPDNSKGIQIYIGLGSDL"
     gene            complement(13627..14472)
                     /locus_tag="PXB09_000478"
     CDS             complement(13627..14472)
                     /locus_tag="PXB09_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDL5232627.1"
                     /translation="MFKQINKRLNFNIFLQMFVLFTPLVQAAQMAIVIDDVGYRIKED
                     REILALPKAVSVAIIPVAPYATERAKDAYNQKRDILIHLPMEPKSKQPIEEGGIHIGD
                     NEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLLKVLKENTLFFLDSKTIG
                     SSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAHAINHARKNGVAVVIGHPRKNT
                     ISVLKQNLAQLPQDIELVSVGNLWRNEKTVPDKPFIMLFEQEPALSSVPPYDSIPLLR
                     GIPKE"
     gene            complement(14473..15636)
                     /locus_tag="PXB09_000479"
     CDS             complement(14473..15636)
                     /locus_tag="PXB09_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5232628.1"
                     /translation="MLVKRINSYCWTAIFSGVISFSTPFSFANNLNQIQQKIQQQTSK
                     INEQKQKRNALQSTLKNQEVEMGKVLDKLQKTEMSLTEVRQTIKATETEIARLEKLEK
                     QQKEKLKEQLDSAYRSGVNPSVLERLMSEEAKNAERMTAYYQHMNNIRIDAIVEIRKT
                     QADLKARRDELKGQQKDHQTQLNEQKKQEKDLKKVQSQRESTLRLIDKTLEQDQSRLE
                     NLRSNEQALKQQLEQAQREAQQAEKREQQREKQAKSGQSKTTENVERTPIKAGRYTMP
                     VSGNIITPFGNNWHGVVIGASAGTSVRAMASGRVIMAQWLAGYGNMVAIDHGNGDISL
                     YGYNQSISVSKGSRVQGGQVIAKVGNSGGQSRSALYFGVTRKGTPINPLNLVK"
     gene            15804..16487
                     /locus_tag="PXB09_000480"
     CDS             15804..16487
                     /locus_tag="PXB09_000480"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDL5232629.1"
                     /translation="MQLVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGQKLKA
                     AGFEFDIAFTSVLTRAIKTCNIVLEESDQLWIPQVKNWRLNERHYGALQGLDKKETAE
                     KYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANLPKDLIPNAENLKITLERVLP
                     FWEDHIAPALISGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYELDDN
                     LKVISKRYL"
     gene            complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXB09_000481"
     CDS             complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXB09_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDL5232630.1"
                     /translation="MINEIKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEY
                     YGSATPLRQVANVVAEDARTLAVNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPL
                     PPLTEERRRDLIKIVKAEGEQGKVAIRNVRRDANDQIKALLKDKEISENEQHKAEEDI
                     QKITDTFIKKVDEVLAAKEKELLDF"
     gene            complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXB09_000482"
     CDS             complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXB09_000482"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDL5232631.1"
                     /translation="MSKPIYKRILLKLSGEALQGSEGFGIDPSILDRMALEIKELLAE
                     GVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAEVNAKLM
                     SAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLK
                     ATKVDGVYDKDPAKYADAKLYNKLTYAQVIEQELQVMDLAAFTLARDHGMPIRVFNMG
                     KPGALRNVVFGTEEGTTISE"
     gene            18041..19603
                     /locus_tag="PXB09_000483"
     CDS             18041..19603
                     /locus_tag="PXB09_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5232632.1"
                     /translation="MKSKQLFGILVAISLATAASCLMLIGSGFFPNPSIFEVILGVFL
                     IIALASSKWTYYLLLLPISIAYAIYTPVGIKFGKPTYEYIASIFATDMMESKEFIAQL
                     PILNIAAGIAIVLAVIFYRKITNRYQIRFLRNKTFVISAFVLMLFSLAPFKFFQEFYN
                     SSLKVKKELEVLNNLTLDSQWGQSTLSSTSNYDDYVLIMGESARKDYHHAYGYPAANT
                     PFMSSAKGTLIDGLTSGGTNTIASLRLMLTKPDTEKWEANYGLTLIDLIKSTGIKTYW
                     ISNQGYLGNYDTPISSIGNKSDVKIFTKAGDSLNTNVSDFELLPHFAKVIEEPAQGKR
                     FIFLHLYGSHPITCDRLTDYPKMFDDDKLPKRYFNVNCYVSSIKKTDELLKRVYDLLV
                     KNQENHQRSFSMVYLSDHGLSHEVSKENIVIHNGKDRSKLHYDIPLFKISSDDTQRNE
                     YKAFKSGLNFTNGIANWIGIENPLLDKEINLFNEQNDKSDYGLKKIIETQSTVEDPAV
                     PIPESYLYKATN"
     gene            complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXB09_000484"
     CDS             complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXB09_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDL5232633.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKS
                     GQAKAAKKAGRVAAEGVILARVASGFGVLVEMNCETDFVAKDAGFLELANEVADFAVA
                     NKGTTIEALQAQFEEKRAALVAKIGENMNIRRVQYLEGEVIAQYLHGAKIGVLVAGAG
                     SEDELKKVAMHVAASKPEFVNPEDVSADVVAKEREIQIEIAMNSGKPKEIAEKMVEGR
                     MAKFTGEVSLTGQPFVMDPSQSVGQYLKSVNTSVSNFIRLEVGEGIEKVEEDFAAEVA
                     KITGGNA"
     gene            complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXB09_000485"
     CDS             complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXB09_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDL5232634.1"
                     /translation="MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLE
                     KTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDA
                     IFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAV
                     AAIKEGRGVETVEVAEEASAE"
     gene            21678..22706
                     /locus_tag="PXB09_000486"
     CDS             21678..22706
                     /locus_tag="PXB09_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5232635.1"
                     /translation="MKKTLSALAIAAATFTSTSTLAANEVNVYSYRQPYLIEPMLKNF
                     EKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
                     EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSG
                     KNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGN
                     SYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLS
                     GEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALKLVDEVK
                     FDDFSEKK"
     gene            22829..24475
                     /locus_tag="PXB09_000487"
     CDS             22829..24475
                     /locus_tag="PXB09_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5232636.1"
                     /translation="MRSQFCWKSIAALTTFIVLLPLIAICYHALQGDNENLAHLWQTM
                     LPIYLKNSTLLVLGTVFLALIFALPTAWIVANYRFWGQRTLQWLLCLPLAMPAYLIAY
                     LYTDLLDYSGAFQGWLRSIFGWTHPQDYWFPQIRTLYGACFVLALVLYPYIFLLVRVA
                     LLEQSENLTHSAKMLGASPSQLFRRITLPLIRPSVAVGIALVAMETLGDFGTVAYFAV
                     PTLTTAIYDSWLGYHDLGTASQIAIFMLLMIFLFLSLEQYSRRKQKSYQRGYEKKSAF
                     KFLTGWKLALALAWCWGLLALAFFIPFGRLLYWAYDYFEQAWNLDFVQFSLNSLKVSI
                     IASVITVLIALLLHFSKRLNTRKILVKNDRLSLQLASLGYAVPGTVLAIGLLSPLTFA
                     DHQLHAWLKSLELSPVGLIFSGSLFALVLAYTIRFLAMAIGSLETSLNKISPSLDMAS
                     QTLGKNGSAMLVKIHIPLIYKGILTAGLMVFIESMKELNASLLLRPFNFDTLATYVFT
                     FTSDEQLERAALPAIVLVLVGLLPVIWLTRSLISQSEKER"
     gene            24485..25495
                     /locus_tag="PXB09_000488"
     CDS             24485..25495
                     /locus_tag="PXB09_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232637.1"
                     /translation="MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTT
                     LLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLSK
                     LPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFS
                     NIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE
                     LYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQ
                     IILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQSQELKIGEQVEVGFQVREFI
                     LF"
     gene            25505..26131
                     /locus_tag="PXB09_000489"
     CDS             25505..26131
                     /locus_tag="PXB09_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDL5232638.1"
                     /translation="MKIEVWSDYACPFCYIGKRHLEQALAQFEGEVEVVFRAFELDPH
                     ANGEPEGDIQQRLMRKYQKTAEQADEMIRYVEQAGKQAGLDLRYRTTQYTRTFEAHRL
                     AKFAESKDLGEAMVERLFKAYFTDNTILAKRTELISLALDIGLERDEIAQLLTGDDFG
                     HEVREDERVAHKYGIHSVPFFVINEKLGVSGAQPPEILLDAIKQALQK"
     gene            complement(26193..27683)
                     /locus_tag="PXB09_000490"
     CDS             complement(26193..27683)
                     /locus_tag="PXB09_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDL5232639.1"
                     /translation="MSLYQIARTETGKVISLNAKMANRHGLIAGATGTGKTVTLRKLA
                     ESLSDDGVPVFLVDVKGDLSGSVQAGNFSGKIAERILQFNLGGEDYLKGYPVSFWDVF
                     GTSGIPLRITISEMGPMLLSRLLNLNDTQGGLLNLVFRVADDRGLLLIDLKDLRALLK
                     FVADNAKEFQLEYGHISAASVGAIQRALLRLENEGADNLFGEPALDLHDWIQTRNGRG
                     VINMLNAEKLINSPRVYSAFLLWFMAELFENLPEVGDPEKPTFVLFFDEAHLLFDDAP
                     KALVDKIEQVVRLIRSKGVGVYFVTQNPLDIPDSVLGQLGNRIQHALRAFTPRDQKAV
                     KSAAETFRANKEVNVVEAITQLGVGQALVSVLDEKGMPTPVEIAYIYPPKSQLAPLAT
                     GERDSLVKQDDLYHHYSQYVDNESAFELLNAKAEAIKAEQAAAEEANNDFFGGILSSI
                     FGSKKKKDQSITEQVVSQVAHSVGRNLRNQVTKQIMRGILGAITKK"
     gene            complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXB09_000491"
     CDS             complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXB09_000491"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDL5232640.1"
                     /translation="MSNHLTEHRFIDFPIHANVLNALDSKGFEFCTPIQAKTFPITLK
                     GKDIAGQAQTGTGKTLAFLIATFNHLLNNEIETSKNQPRALILAPTRELAVQIGADAE
                     LFLKHSDLKLALAYGGDGYDKQVQEIEKGVDILVGTTGRVIDYVKQGIINLDKIQVIV
                     LDEADRMFDLGFIKDIRYLMRKAPKPSERLTLLFSATLSAKVRELAYEDMDNAEYIEI
                     EPLQKTGHRIKEELFYPSNEDKMALLLTLLEEEWPERCMIFANTKHKCEEIWQYLSAD
                     GHRVGMLTGDIPQKKRLSLLDNFTKGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDK
                     EDYVHRIGRTGRAGESGHSISFACERYAVNLPAIEEYIGHQIPVSQYDKESLLTLPKV
                     NRSRSKKTFLAKTKKNSRN"
     gene            complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXB09_000492"
     CDS             complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXB09_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDL5232641.1"
                     /translation="MTIDQWQRAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRA
                     RSPLKAVLQPFTPLLLRWSGKGDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVL
                     ENQTAYPELFQHYLRCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD
                     PKMTYQFQENQGFIASLLQNNQSFLGSDLLAFAQLDFSEKSTQQAAKRFTRMALKPYL
                     GSQPLKSRELFQSILPNKLKSG"
BASE COUNT         8578 a         6516 c         5555 g         9206 t
ORIGIN      
        1 gtaatgtccc ttttttgaat gtctactaca aaatgggata ttttacaaac cgattgacta
       61 atgaagcaag aatataatta actacaactg gatatatttt gcaaatttcc cgataaattt
      121 caccgcttgt agataaaaac cgtagataaa aaccatagat aaaaaatagg agctaaacat
      181 ttttagcccc taccgtcatc agaaataaat cccgactaaa atcgccacga acacacctaa
      241 gccgaaatag tggttattta gaaacgcttt aaagcattcg ctacgttctc tttttttggt
      301 cagccaacat tggtagataa acagcgtggc acttaaggct aatacgacaa aatagccgat
      361 gtgataatct tttaccacgc ccaataaccc caataaaatc aaggtgataa actgtaataa
      421 cgcaataatt ttattatcgt attgagcgaa taaaattgca gtggatttaa ctccaattcg
      481 taaatcatcg tcacgatcaa ccattgcata ttgggtgtcg taggcgactg tccacgctag
      541 attggcaaaa aacagcagcc agcattcaag tggaagagtt tccgttaccg caccaaatgc
      601 catcggaatc gaccaaccga atgccattcc aagcactact tgtggcaagt gggtaaaacg
      661 cttcataaag ggataaatca ccgccagaaa aactgccaca aaggaaagca gaaacgcata
      721 gcggtttagc attaaatcga gcagaaaagc gaacaacagc aagatggcaa aaatgacttt
      781 tgcctcagtg gtggtcactc tgccggtagc taatgggcgt tgagaggtgc gtttaacgtg
      841 tccgtcaatt tctctatcgg cataatcatt aatcacacaa cctgccgcac gcataacgat
      901 taccccaagg gtaaaaatgg ctaaaatcgc aacaggcggc attccctctg cggcaataaa
      961 taacgcccat agtgtggggt gtaataataa taacgtgccg atgggtttat cgaaacgcat
     1021 taactgggcg taggcaatcc atttttgttt agaaaaaaga gtttcgttat tcattacaaa
     1081 ttttgacgat aacgtccgat tggcttaaat gagtctgtaa ttctaacggt aaatcttgat
     1141 ctgtaaacaa ataatttact tctttaacat ttcctaaacg tgcaatagct gtacgggtaa
     1201 actttgaatg atcggtcact aaaaccactt gtcgggaaca ttccattaat gcacgcttta
     1261 cctgcacttc gtggtaatcg taatcgagca tagagccgtc catatccacc gcactaatgc
     1321 ctaaaatccc aaagtccaaa cggaattggt taataaagcg aaccgtttct tctccgatta
     1381 gcccgccatc acttcttagc cctctgcctg ctaccgtaat ttggcaatct tcattttgca
     1441 tcagaatatg agccgcattt aaattattgg taactacttt taaattttta tgcgaaagta
     1501 aggctaatgc cactgcttct gaagtcgtgc caatatctaa aaataatgat gctccatttg
     1561 gaatcagttt tgccacctgt tgggcaatcg catttttctc gtgtgagaaa aattgcttgc
     1621 ggtgggtgta atcactattc tccgtattgg aaggagcggc tgccccaccg tgatgacggc
     1681 gaatcagatt attttctgcc atttcattca gatcacggcg aatggtttgc ggactcacat
     1741 tcaattcagc cactaattgc tcggtactca catagccaag ctgattaacc agctcaatga
     1801 tctttttgtg tctgtttgcc tgtttcatat ttcctctttt gcaaataatt tgcagaaaaa
     1861 gaccgcttgc aagcggtctt ttttcagtta aattttacaa tttatcaaca agttcaaccg
     1921 catagccgat atagcttgcc ggtgtcatct ctttcaaacg atttttttca ttttccggaa
     1981 tttccaactt atcgataaac tcacgcattg cggtttcatc aacccgtttg cctcgagtca
     2041 gctctttaag tttttcatac ggtttttcaa tgccataacg acgcataaca gtttgaattg
     2101 gctctgccaa tacttcccag ttttggttga gttcatcacg caagtgttgt tcattcactt
     2161 ctaatttgct aatacctttt aaggtggacg cataagcaat taacgcataa cctaaaccta
     2221 cacctaaatt acgcaacacg gtggagtcag ttaagtcacg ctgccagcga gaaatcggca
     2281 atttttgccc caaatgagcc attaccgcat ttgccaagcc aagattgcct tcggaatttt
     2341 caaaatcaat cgggttcact ttatgtggca ttgtgctaga gccgatttca ccggcaatag
     2401 tgcgttgttt gaagtgattt aaggcaatgt agccccacat atcacgatca aaatcaatta
     2461 aaatcgtatt aaaacgagcc acgcaatcaa agaactccgc aatataatcg tgcggttcaa
     2521 tttgggtggt gtatgggttc cacgtcacac ctaacgattc cacaaattct tggctgaaag
     2581 tgtgccaatc aatctccgga tatgctgata aatgtgcgtt atagttgccc actgctccat
     2641 tgattttagc gagaatttct aaattttcta actgtttata ttggcgttgt aaacgatatg
     2701 ccacatttgc catctcttta cccattgtgg tcgggcttgc cggctgaccg tgtgtgcgag
     2761 aaagcaacgg aatatgttgg taacatttcg ccagctctgc tacagcatca atcacttttt
     2821 tccattcagg taataatact tcttcacgag cggttttaag cattaaagcg tgcgaagtat
     2881 tattgatatc ttcagaagta caagcaaaat gaataaattc attcaccgct tgtaattcag
     2941 gcaacgcttc acatttctct tttaggaaat actccaccgc ttttacatcg tggttggtgg
     3001 tacgttcaat cgttttaatc cgattggcat cttctaacga aaaatcagcc acaatttggt
     3061 ttaggtaatc gtttgctttt tcagaaaaca ctggaacttc attaatttgt gtatgcgatg
     3121 ccaatttttg taaccagcga acttccaccg tcacacggaa ttttaataag ccaaattcac
     3181 taaaaatcgg acgaaggctc gcaactttgt cttgataacg tccatcaatc ggggataacg
     3241 cagttaaagc ggtaagttcc attgttttat attctccaaa taggtaaatg ttcggttaga
     3301 tttgacgata aaatttctgt gcttggttaa aaattttctt gcgtgaaaat aaaaattgcc
     3361 aacggcttcc gccgacttgc tgccacaaaa taccggctcg aataccggct agtagcgagg
     3421 ctcgaatttt attctgtata tccgggcgaa ccaagtaatc ttgcattccc atcacgtgaa
     3481 ttttcgtacc taacgggctg ataatatcgc tataaatagc ggctaaattg gcaatcattt
     3541 gatctgccat cacattatct tcatacaggg ctaactggcg ttccacttgc tgtaaacgct
     3601 gggctaactg ttgttttgct tcagggtttt tattgagttt ttggctaagg gcgagcaggc
     3661 ttatccaata acgtccgact tcggtatcta atttgccgtt accgccgcca gtttgagcta
     3721 atgcggtttc taagcccatt tttaaatggg aaagatcatc gccaaataca cttaacgttg
     3781 attccggctg agtgattaac aggctttcta aagcacactt aaaagcctct ctgtctgcca
     3841 tgcctttatg tgcaaattgt tgcactaacg tcgccgcttg gcaaacgccg gcataagcaa
     3901 gggtaatatc gtggtaatcc gccatctctg taaaattcaa tatgataaaa cattagtggg
     3961 aatatagcat tttttcagct tcttttgaat ggcaaaaggc atttattcta ttgaaaaata
     4021 aatgcctttt cattaatacg caatttgctg caaaaactat cctaccaatc gcccattatc
     4081 tattcgataa accacatcaa atttatccag tccgctttgg cggtgagtga tcataattaa
     4141 ggtgcgatca cagcagtgag tcaaaattag gtttaaaatc tgctgttcgg tttctctgtc
     4201 cagtccttct gttggctcat caagtaagac taattcagca gaactcagga gcaaacgggc
     4261 aagccctaaa cggcgttgtt cgccaccaga aagcggtctg ccgccctcgc ctaaccataa
     4321 atttaagccg tctgtttcaa gcaaatgccc taagcctact tttcttactg cttcttgcat
     4381 ttgttcgtct gtagcttgag cattccccat taataaatta tcttttaggg tttggctaaa
     4441 aatatgcact cgttggctta aggtaactaa ttttgagcgt aacatcggct ctgaatattc
     4501 gtcaatttta caattattca gccaaatttg accgcttgta gggtcgtagt tgcggtttaa
     4561 cagttggaat atggtcgatt ttccgctacc cgttttacct aagattgcca ctttctgccc
     4621 ttttaatacc ttaaaggaaa gattatttag tacgttttgc tcgccgtaat aagcaaagct
     4681 cacgttttca cagcgtacaa gcggttgatt ttggctcaaa ttttgccatt ctgccttgct
     4741 accaaatgtt acattaggct gttgttcggt aatttcacta atccgctcgg cggcggtaat
     4801 cacttgccct aaatgcaaaa aggcgatacc aatcggggaa agaatctccg ccgatgccat
     4861 tacacagaaa atcactaacg caattaaggc ttcagggtat tttgcagtgg gcacattaat
     4921 cgaagttgaa accaaataga tcaccacaca agtcaaaatg ccgttggata acattatcaa
     4981 gctatttgat aagccggaca gtcggctttc tttgctttga gcgttcagcc attgttgttc
     5041 agtttgctgt agtttttcgc tcatttggtt caagttgcca aagagtaaaa attctgcatt
     5101 taactgtacc cactcaataa attggctgcg gtaatttgct cggctttgta ttgcattacg
     5161 ccctaatttc aaacccaatc gataaaatac ggtaggaata acggcaagca ataccaatag
     5221 tgtgccgcaa atgatcagca ttaatggcac ggaaacaaaa gaaagcccga ttgccataaa
     5281 tgcaataatc atcactgcac tgacaaaagg cgagactaaa ttcagatata gggtgtctaa
     5341 cgtatccaca tctgccacca agcggtttaa caattcgctg tttctaaagc gatttagccc
     5401 gcttggactc agtggaatca attttttaaa gacgctagca cgcaaattcg ccaatacccg
     5461 aaaagtcgca tcgtgggtga ctaaacgttc aaagtaacgt gaaattgtcc gccctactgc
     5521 caaccctctc acccccgatg aagggtagaa aaagttaaaa ataagcgcat tgccggctag
     5581 aaatgaggca gctaaaaacc aaccggaaag gctgagcaaa ccgatacttg ccgctaatcc
     5641 taaaattgcc agcacaacac ctaataatag tcgcccaaaa tgggtttggt agagagcaaa
     5701 aaacgggaac aacgatttca ttagatttct ccctgatgca ctaattcatt atgtattaat
     5761 tccgcaaaaa agccggtgtg ttctaattca gtgaaacgac ctttctgaat gatttgccct
     5821 tgtttcatca cccaaatttc atcgcattgg gttaaatctt ccactcgatg agtaatcatt
     5881 agcgttgttt gctctcggct gagattatgc agagcggcta acacttgctg ttccgaatcc
     5941 atatcaaggc ttgcagtcgg ctcgtctaac agtaataatt cgtacgggcg aagcaacgct
     6001 cgtgcaatcg caatccgctg tgcttgcccg ccagagatac cgatattact gtcttgcact
     6061 tgatgctcca accctaaacg tgccacaaat tcatcggctt ttgaaagctg taatgccttg
     6121 gctaattcag aatctgtcgc attagggttg cctattaaaa tattctcttt caaactgcca
     6181 tgcattaatt gcggattttg ccccacccac gctaatttcg ctcgccattg gcttaaattt
     6241 aaatctcgca gttcggtgcc gttaatcgta accgaccctt cataaggcaa gaaaccaagt
     6301 aacatattca ttaatgaact ttttcctgca ccactttgcc caaccaaagc gatatgttgg
     6361 tgtgcattca actcgaaatt taacgcttgg gttaaggctt tgccttgtgg tgagaagatc
     6421 acgcaatctt tggcttgaat cacaagcggt tgattttcaa cattttcttg caaattgcca
     6481 ccttgcgttt tcaccttttc ttttaagaaa gtttcgatat tatctgcggc actaatcgct
     6541 gctgccttgt cgtgataaaa cacgccaagt tcacgcatcg gttggtaaaa ctcaggtgcc
     6601 accattagac aaaagaagcc gataaataag gtcacgcccg taccataata gccaaaatcc
     6661 agctcaccta aaaaaataaa gccaaaatag accgccgtca ccgcaatcga taccgccgtg
     6721 aaaaactcca ataccgcaga ggataaaaac gccattttta gtacgtccat cgtactgatt
     6781 cggaaatctt cggtgctttg gtagatttgt tcagtctgct tttccgcttg cccaaataag
     6841 cgaatggttt ctaaaccttt taatttatct aagaactgtc cgctaatacg ggaaagaatg
     6901 ccgatattac gctgatttgc ctccactgct ttcattccgg ctaaaatcat aaataaaggt
     6961 aataatggca ttgttgcaaa taaaatagcc cctgctgccc agttaatcgg gaatacaaaa
     7021 cagaggatca gtaatggcac tatcagcgat aaaaattgct gtggcaaata gcgtgcgtag
     7081 aaattatgta gattttccac ctgctcgagc attaaggttg cccagctgcc cgccggtttt
     7141 tgttgaatgc tcatcggccc gactgcttcc attttggcta gaatttggcg gcgaagatgt
     7201 aaacgcaagg tttgccctgc tttgaaaccg acacgctcac gcagaaaaat gaagaatgct
     7261 ctggcagcaa aacaacagaa taagagcata atttcaacca gaaagctatt cggtgactgc
     7321 tttccgataa gcattttgtc taacattgtg gcaatcagcc acatctgtcc aatcatacat
     7381 aaactactga aactccctaa cagtatgttt aagtgcatat attttttgat gactttttgc
     7441 tgacttttaa gccatttttg taattcgcgt tggcgttgtt tttccataat tttgtcaatt
     7501 tttttgtttt ttcaaccgct tgtaaatcgg gtttgccatt ctactataaa gcaaaaaggt
     7561 tgttaatggc gaaacattaa caacctttca ttcagcctta actagaatag ctcgtcaaat
     7621 tcaaagcgat acattaaatc taccgcttgg ttaatacttg agacccattg taagtacaat
     7681 cttggcgtta aattatagcg taaggttaat tcggtaagcg gtgcaaaaat gcccacgcca
     7741 tacttcactc tgaatttagg ggcaaggctg gcacttactt ctactttggt gttatcgcca
     7801 atacctgcgg tggtcacgct taaatctttg agtccgaaag tgctaccaac atcacccacc
     7861 aatttactgc tttttgataa gctcatactg agtaatgccg ctgcgactgc attactggag
     7921 ctggtatcgc cactgctttc caatgaacga ccagttaaaa tataggaaag tgcttcattt
     7981 tgcgacattg ccggatcaga gaatactttt accgttggat tgtctgccaa accggtcact
     8041 cttaccccag ctgtaatggt cggatcttcc attgcctccg gattgcgtat agcttcaata
     8101 tctaaggttg gctgagacgg tgagccggca aaactaatat cacctttacg aatcagcaag
     8161 tcttgaccat aagcggcaaa tcgtccttca cgcaaatgaa cttgcccgta aagccctaaa
     8221 ccttgtttgc cttgcctgac agacaataag ccattcacgt tactgtttaa accataggct
     8281 ttgagtttga catcattacc gatgttaatc ttaatatctg cattaattgc cattccacct
     8341 gaggtttgag ccggaatatt acgttggcta aacggcactt tatttttcac agagccgtcc
     8401 ataatcacct catctccact tacactgacc gcactttcag gtaactgctc gacttcaatt
     8461 cttgcccaag ggatatctac atttccactt aaggttaaaa gagttggcgt tgccgtcact
     8521 tgaatatccg ggctaactgc cacttttgcg atattaggaa tatccacttg gaaacggtta
     8581 gcttgagcgt gaacccgtgt tttccacgca tttagatctc gccagtctgc atcaccctcc
     8641 aaacgcagtt cgctttgttt ggtttgtaat ttaccgctta aagtcgatgt tgccccgtgg
     8701 aaattcattg ctaaattccc acctgtaata tcaaacggca ttgtaacaga gcgagctttt
     8761 aactctgtaa cgtttagatt tccgtgcaat aacggagagg ttgcggtgcc gctcacggta
     8821 agacgagcat tcacattgcc atcaaccgaa tcgccccgtt caagtagcgg tcgaatcagc
     8881 tttaagctta attggtcaag atgaatattg ccggataacg cacgagcctt acttaaatct
     8941 ttcatcacta aatcagtcga aagtctgccg ttattttcga cccttaaatc agatttaagg
     9001 gttaaattat tgtcagacat tttcagatca attttaagcg gtgaaacggt gagtgggaaa
     9061 ctttttcccc cctccatttt ttgaataaat ttaatcgcat tagaggttaa atccagattc
     9121 acttgaggct gtttgttttt aaaccaagct gcatcgcctt tggcattcac aatccctgaa
     9181 agctggctgt ttttctccaa aaattgttgc aataccgcta aatcaaagtt acggatttca
     9241 aaaggcactt taccctcaac accggcatta aatgcagtcg ggaaacaaag attaattttc
     9301 cggttatgcc aacaatgtgc ggaaatattg gcgttaatgg ctttattgtc atatttcaca
     9361 ttcactgctt tatctgcttg gaattgacca aactcggtgg attgaatcga aacttggctt
     9421 aattgccctt cccaaatttc tttcaaacgg tcaaattttc cagaaatttg caaatcagca
     9481 ccaaccggat tgccttttgc acttaatttc aagctatgat tttcttcatt tccttttagc
     9541 aataaagtgg catttcccac tttgatttca ttataggcaa attgacgtaa ccccaaggtt
     9601 aaatcccctt gaatggtttt ctcagtggta attttgcctt ttgcggttaa attttgcagt
     9661 ttaaattgct catagcctac atttgaggcc actaaatcta aatcaatgtt aggttctgaa
     9721 accttacccg ataatttggc attaccattc acgctggctt ttaaattcgg cactaaccct
     9781 tgcaaattag gggctttaat atccgcatag aaatcagatt tttcgcctaa cacgcctttt
     9841 aaatcgatct tattttcacc atacaccagc gataagcccg gaacatctaa aagttgttga
     9901 tgatcggctt ttaaattacc gcttaagtgt agatttttct gtaataacga acctttaata
     9961 tcaatattcg agacgtccgc tttccatccg ctagctgaat tgccccgtcc tgcataacct
    10021 tcggaagata aagaaccgga caataccgcc ggccagtctg ccagtaggga tttagtgtta
    10081 atatgctgaa gtttcaaatt tgaacgccac gcaacgccct cgctccaatc cactaaaccg
    10141 tcgatcttcg ccgtaccttc cagcgtattg agacttaaat cttgtatatt aaaatgggtt
    10201 aattcccctt tgccagttaa actagccgag cttgcaggca cgcccattcc tttggcactg
    10261 actttagcct ccaaagcgta atccaggaga ttgccattaa gcctcatggc gatattctct
    10321 aaactcagca catcaccatt ttgctgagga gcaaacggat aacgcattga ctcactcttc
    10381 agcgataaat caaagggagt tttcgcctga gccagtgcaa cattgccctc caacgaggcg
    10441 ctaattgcac cagccgtctt cacttttagg ctggttttgt catatagctc accggaaaga
    10501 gaggcttcaa tttgattgaa cggcaatttt actttcgccg tttttgcctc gtgaccactt
    10561 agcgtccaac ttagcggata attatcttgt aacgataaag aaccgcttgc ggttagatcc
    10621 ccttggtcgc ttttgaaatc taaacttttt aggttgatat gctgatcttt tgcttgagcc
    10681 tgaagctgta aagaggcaac atttaacaat gagatcggct caatcaaatt ccctttttca
    10741 tctttagctt tttgagcaat cgctacattc gcaatatcaa tctgttcaat attgagatca
    10801 agaggcaaac taaagcgaat atttttatcc aataacggct gtgctaattg tgctttaatc
    10861 gctgcccaat ccactttatt atccacctgt tcggcctgtg caacagtttt tctctgtaat
    10921 tggtgaaagc cctctacgac tttttcactg gttttttcca ccgcctcttg aatcacttta
    10981 tcagcaatct cttgtggatt tgtcgctgat aacgcctctg tttttgcatt tttttgtgca
    11041 aaatcgaccg cttgttcagt atcagtttcg tctaacttta aggctaaaag cagatttagc
    11101 ccctctaact gtgtcgggtg aacggtaata gcccgccctt taccagaaag tgcagtgtgg
    11161 aaatgattaa gatgaatatc catatcatca actttgacct tgatattctc taaattgata
    11221 ttttgagctg aaatccccaa tggcaaattt aattcggtga aaggttcggt ctcttctttt
    11281 ggctgagaag ggggtaattt agtcgtatca atcaacacct ctgtatcttt aaggctgaga
    11341 ttattcaaac acatttcata gtggagcaag cagctaaaac caatatgcag atctgcttgc
    11401 ccaaccgtta cattcacacc gtccatcaca aatcgggcat cagaaagctg taacccatct
    11461 tgcaggctac cttgcacttg cccaagttgt aatggctcta cgaatttatc tacccagctt
    11521 aacactttac gttgcccgta acctgtgcat agaaagagaa tggcgagtaa aagtagaata
    11581 aacgtcagac aaaagccgtg cttcaaaaac cgccactttg attttttagg ctgtgttgct
    11641 tgtggctctt gtgctgagtc cgtttgattt gtggctgttt gtttattttc gtcagtcata
    11701 atcgtgcata tttatgaggt gataaaaagt aaacaagcgg tatgcgaaat tttactgaaa
    11761 ttcgaccgct tgttttcatt tacagatcgg aacctaaacc aatataaatt tgtattcctt
    11821 tggaattatc tggtgatttt accggcgtgg cgacatcaaa tttaatcgcc ccgataggtg
    11881 atgcccaacg cacccctaag cccgtaccgt agtagagatc ctgagttttg aatttattcg
    11941 atgccaagcc tgcatcataa aaaattgcac cccaccaatt agggtaaacc tgatactgat
    12001 attctactgt gcctgtggct aaatgagagc ctccgacacg tttgccatta ctcggatcac
    12061 ggggggaaat atccttatag ccaaagcccc gcacactcat atcgccaccg gcaaaatagc
    12121 gtaacgccgg tggaatacgt tcaaattgat tggctttcaa ataccccaac tccgccctta
    12181 aatagaaccg atggttatca aagtaagttc tcgcccaaga tgtcgaggct ttataactat
    12241 aaaagtttac atctgaacct actgcacgac tcccccagtt taccgttaat ttttgtgtat
    12301 ccccccataa tgggtaaggc ttgccatctg ttctggttcg attcaatgat gccgttgggt
    12361 aaactaataa ggttttaaat cgatcattag cttgagtaaa agaatcgtaa cgggctttta
    12421 aaccaacaga aaatgaccaa ccggtttcgt gagtccagaa acgttgtaag ccaagggtgg
    12481 cagcggttga ttttgtatcg ttttgatctt cgttttctaa agtgccggat aattggtaat
    12541 aataatgtag cggatcttct ctaagtggaa tattataacc aaattcaaat gtctgctccg
    12601 gcttagaaac gtacgttcgg ctttcaatac tatgacctcg gctatttaac caaggtttct
    12661 tccagttaag ctgtaacctt gggccaactt cagtttcgta gcctatccca atttccactt
    12721 cattgcgttt tttaggctga aataacacat ttaaatccac taatttatcc tgttcattta
    12781 aatgtgactc aaccatcact gatgaaaacc aattactgga aaggtaatct tgggttaaaa
    12841 tcgaaagatc gttagctaaa tatggctcac cggaatgaat tttaagaata ttttgcaaat
    12901 attcttcttt gatttggcta tcaacaaacc ggatttgtcc ataatggtat cgttttccgc
    12961 tatcatagcc taaacgccaa tccgctttat gatcggtcgg ataaacttcc aaacggtgat
    13021 aaagccaatg accgtcaaaa taccctttac taaaagcggt actttcaata tcacctttaa
    13081 aattatcata ggttttatgg tttaaacgac taccttgttt tggggcttta ctgactagat
    13141 gagcgaaatc ttcgtccgtt tttgcatcgc cttgcaaaac aatatcggtt tcatcaattt
    13201 ttaccgtctc tttatctagc tcaacattta atactaagag cggtttcttt ccctcttgag
    13261 gtagctgcac aaattggtat cggctattat aatagcccaa ggctctcaga gctttatcta
    13321 ctgtggtttg caccaaatat tgataacgct ctgaaccatc tgcatattca ttggcaattt
    13381 gatctaaata tagctccaca tttttcttgg catctttacc ctgaatgcct ttgacttcta
    13441 aagtgactaa tggctctatt tctggctcat catcactatc ttccgctaat ttttcttgca
    13501 gattttcaac tcgctcacga tctacgtcag acagcctttg ctcttgattt gcttgtgcca
    13561 ttgaagcaaa agccactaaa cagcagaatg ttaaaaaatg tagttttgta ttcattagta
    13621 acctttttat tcttttggaa tgccacgcaa aagcggaata ctgtcataag gcggaacaga
    13681 acttaacgct ggctcttgct caaagagcat aatgaatggt ttgtcaggca ctgttttttc
    13741 attacgccac aagtttccaa cactcaccaa ttcaatatct tgaggtagtt gtgctaaatt
    13801 ttgcttcagt acactaatcg tattcttgcg agggtgtcct atcaccaccg ctaccccgtt
    13861 ttttcgtgcg tgattaattg catgtgcaaa ctgtttttgt acatcagcaa gcagatcgct
    13921 atcatctaaa aaaatgtctc tctccagcgt attaatacca aattgacgag ccgttttagc
    13981 cgccacacta ctgccaatag ttttactgtc taaaaagaaa agcgtatttt cttttaacac
    14041 tttcaacaaa tgttgcattg tagcagagtc tgaagttgct ccactgccca tatggttatt
    14101 taaaccaata gcatatggta cttgaccacg agaagtatga ataagtttcc gaattttctc
    14161 ttcgttatca ccaatatgaa tacccccctc ttcaattggc tgtttcgatt taggttccat
    14221 tggcaaatga atcaaaatat cccgtttttg gttataagcg tcctttgccc gttctgttgc
    14281 atagggtgca acaggaataa tcgccacgct taccgccttg ggtaaggcta agatttctcg
    14341 atcttctttt attcgatagc ccacatcatc aattacaatc gccatttgag ctgcttgtac
    14401 aagcggtgta aaaagcacaa acatttgcaa aaaaatgtta aaattcaacc gcttgttaat
    14461 ttgtttaaac atctatttca ccaaatttag aggattaatc ggcgtgcctt tacgggtaac
    14521 accaaaatag agtgcagaac ggctttgtcc cccactgtta ccaaccttcg caataacctg
    14581 tccgccttgc actcggctac ccttgctgac tgaaatagat tggttatagc cataaaggga
    14641 aatatcacca ttgccgtggt caatcgcaac catattgcca taccctgcaa gccattgagc
    14701 cattatgact cgcccgctcg ccattgctct aaccgaagta ccggcagaag caccaatcac
    14761 tacaccgtgc caattattac caaaaggagt gataatattg ccagacaccg gcatcgtata
    14821 tcgaccagcc ttgatcggtg ttctctcaac attctcagtt gttttggact gaccggattt
    14881 tgcctgtttt tcccgctgtt gttcacgttt ttctgcttgc tgagcctctc tttgcgcttg
    14941 ttctaattgt tgttttagtg cctgttcatt gctgcgtaaa ttctctaatc ggctttgatc
    15001 ctgctcaagc gttttatcga ttaaacgtaa ggtactttca cgctggcttt gtactttctt
    15061 taaatctttc tcttgtttct tttgttcatt aagttgcgtt tgatgatctt tttgctggcc
    15121 tttcaattca tcacgtctgg ctttaagatc agcttgggtt ttacgaattt caacgatcgc
    15181 atcaatgcga atattattca tatgctgata ataagcggtc attctttccg cattttttgc
    15241 ctcttcagac attaaacgct ctaagaccga agggttcacc ccagaacggt aggcagagtc
    15301 caactgctct tttaattttt ctttctgctg tttttccaac ttttctaaac gggcaatttc
    15361 agtctcagtc gctttaatgg tctggcgaac ttccgttaaa gacatttcgg ttttttgtaa
    15421 tttatccaac accttcccca tttctacttc ttggtttttt agggtagatt gcaacgcatt
    15481 acgtttttgc ttttgttcat taatttttga ggtttgctgt tggatttttt gctgaatctg
    15541 attaagatta tttgcaaaag aaaaaggggt agaaaagctt attaccccac tgaaaatagc
    15601 agtccaacag taagaattta ttcgtttcac cagcatacct ttgtttcttc aaaatattat
    15661 taaggttata ttctaatcgg ttatttgctt aagatcagct ttttagtgaa agaatttaac
    15721 tatctatttc aaaatataaa gaattttgct ataaatagca caatttcaaa tccattaatt
    15781 ttactcaaag ctaaggagtc attatgcaat tagtatttat ccgtcacggt ttcagtgaat
    15841 ggaatgctaa aaacttattt accggttggc gtgatgttaa tttaacagaa cgtgggattg
    15901 aagaagcaaa atctgccggt caaaaattaa aagcagccgg ttttgaattt gatattgcgt
    15961 ttacttcggt tttaacccgt gcgatcaaaa cttgtaacat cgtattagaa gaatcagacc
    16021 aattatggat ccctcaagtg aaaaactggc gtttaaacga gcgtcactac ggtgcattac
    16081 aaggtttaga caaaaaagaa actgctgaaa aatatggtga tgaacaggtt cacatctggc
    16141 gtcgttctta tgacatctct ccaccggatt tagacccaca ggatccaaac tcagcacata
    16201 acgaccgccg ttatgctaac ttaccaaaag atttaattcc aaatgcagaa aacctcaaaa
    16261 tcacccttga gcgtgtgtta ccattctggg aagatcatat tgcacctgca ttaatttcag
    16321 gtaaacgcgt attagttact gctcacggta actcattacg tgcattagca aaacacatcg
    16381 aaggcatttc tgatgcagac attatggact tagaaatccc aaccggtcag ccattagtgt
    16441 atgaactaga tgacaactta aaagtaatca gcaaacgtta cttataattg gtaaatttcc
    16501 gataaaaaat aaccgcttgt agtgcaacac attacaagcg gttatttttt gttaattttt
    16561 tgcaaatggc aaagaacaaa aataaaggcg aatcatacat tcgccttatt gttttaaagt
    16621 agattagaaa tctaacaact ctttctcttt tgctgctaat acttcatcaa cttttttaat
    16681 gaaggtatcg gtgatttttt gaatatcttc ttcagctttg tgttgttcgt tttcgctgat
    16741 ttctttatct tttaataacg ctttgatttg gtcattagca tcacgacgaa cattacgaat
    16801 tgccactttg ccttgctcac cttctgcttt aacgattttg attaaatcac gacgacgttc
    16861 ttccgttaat ggtggaagcg gaacacgaat ggttgtgccg gcagaagatg ggtttaaacc
    16921 taaatctgag gttaaaattg ctttttctac cgcagagatt aaagatttat caaatacgtt
    16981 taccgctaaa gtacgggcat cttcagctac cacgttcgct acttgacgta atggagtcgc
    17041 agagccgtaa tattccactt gaataccgtc taataaagaa ggttgggcac gacctgtacg
    17101 aattttcgca atatgccctt ttaaagcctc aaggcttttt tccatacgat cttgggtatc
    17161 tttcttgatt tcgttaatca ttgatttttt atccttttat ttagtaactg agagttaaac
    17221 agagaaaatt aattattcag aaatggttgt accttcttca gtaccgaata ccacattgcg
    17281 taacgccccc ggtttgccca tattaaagac acgaattggc attccgtggt cacgagcaag
    17341 cgtgaatgct gctaagtcca ttacttgtaa ttcttgctca ataacttgcg catacgttaa
    17401 tttattatat agttttgcat ctgcgtattt tgctgggtct ttatcataaa cgccatcaac
    17461 tttagttgct tttaatacca catcagcttc aatttcaata ccacgcaagc aagcagctga
    17521 atcggtggta aagaacgggc tacctgtacc ggcagagaaa atcaccacac gtttttcacg
    17581 caacatttta attgcttcag accagttgta agtgtcgcaa atcccattta attggaacgc
    17641 agacattaat ttagcattta cctctgcacg gtgtaaggca tcacgcatag ccaaaccgtt
    17701 cattacggtg gcaagcatac ccatatggtc gcccactaca cggttcattc ctgctttggc
    17761 taattttgca ccacggaata agttaccgcc gccaagtacc acaccaacct caacgccttc
    17821 agcaagtaat tctttaatct ctaacgccat acgatccaaa atagacgggt cgataccaaa
    17881 accttcactg ccttgtaggg cttcaccact taatttgaga agaattcgct tataaatagg
    17941 tttgctcatt ttaattgcct cttaactgta tggactaaac acaaaattac gttattatag
    18001 aacaatccaa tataacgata aactaaaaat attcactaca atgaaatcca aacaactttt
    18061 cggcattctt gtcgctattt cgctggcaac tgctgctagc tgtttaatgc taatcggatc
    18121 aggctttttt ccaaatccga gtatctttga agtcattttg ggcgtattcc tcatcatcgc
    18181 tcttgccagc tctaaatgga cttattattt actcttactg ccaatcagca tcgcttatgc
    18241 aatttatacc ccggttggga taaaattcgg taaaccgact tacgagtata tcgcctctat
    18301 ttttgctacc gatatgatgg aaagcaaaga gtttattgct caactgccga ttttaaatat
    18361 tgcggcgggc attgcgattg tactagcggt cattttttat cgaaaaatta ccaatcgcta
    18421 tcaaatccgt tttttacgca ataaaacatt cgtgatttcg gcttttgtat taatgctgtt
    18481 ttcccttgca ccgtttaaat tttttcagga gttctacaat tcgagcctaa aggtaaagaa
    18541 agaattggaa gtgctgaaca atttaacgct agattcacaa tggggacaat caaccctcag
    18601 ctcaacttca aactacgatg attatgtact gattatgggc gaaagtgcga gaaaggatta
    18661 tcaccacgcc tatggctatc cggctgccaa tacgcctttt atgagttcgg caaaaggaac
    18721 cttgattgac ggtttaacct ccggtggcac aaacactatc gcctcattac gcttaatgct
    18781 cactaagccc gatacggaaa aatgggaagc aaattatggg ttaaccttaa ttgatttaat
    18841 caaatctacc ggtatcaaga cctattggat ctcaaatcaa ggctatttgg gcaattacga
    18901 tacgccgatt tcctctatcg gtaataaaag tgatgtcaaa attttcacta aagccggcga
    18961 ttcattaaat accaatgtga gcgattttga attgttaccg cattttgcta aagtgattga
    19021 agaacctgct caagggaagc gtttcatctt tctgcattta tatggctcgc atcctattac
    19081 ctgcgatcgt ctcaccgatt acccgaaaat gtttgacgat gacaaactgc caaaacgcta
    19141 ctttaatgta aattgctacg tgtcatctat caagaaaacc gatgaattgc tgaaacgggt
    19201 atatgatttg ctagtgaaaa accaagaaaa tcaccagcgt tcattctcaa tggtttattt
    19261 gtctgatcac ggtttatcgc acgaggtttc aaaagagaac attgttatcc acaatggaaa
    19321 ggatagaagt aaattacact acgatattcc gctgtttaaa atttcaagcg atgataccca
    19381 acgtaatgag tataaagcct ttaaatccgg cttaaacttc actaatggta ttgcgaattg
    19441 gattggtatc gaaaatccgt tattagataa agaaattaat ctttttaacg aacaaaacga
    19501 taaaagtgat tatgggctaa agaaaatcat tgaaacgcag tctactgtag aagatccagc
    19561 tgttcctatt cctgaaagct acttatataa agcgactaat tagcaaaagt aagtaacaaa
    19621 aaagcaggct ttaagcctgc ttttttagtt tttagtatca gaaaaattaa gcgttaccgc
    19681 cagtgatttt cgctacttct gctgcgaaat cttcttctac tttctcaata ccttcaccta
    19741 cttctaaacg aataaagtta gaaactgaag tatttactga ttttaaatat tgacctacag
    19801 attgagatgg atccattaca aacggctgac cggttaatga aacttcaccg gtgaatttag
    19861 ccatacggcc ttcaaccatt ttttctgcga tttcttttgg tttaccagaa ttcatcgcaa
    19921 tttcaatttg aatttcacgt tcttttgcta ctacatcagc agaaacatct tctgggttta
    19981 caaattcagg tttgcttgca gcaacgtgca ttgctacttt cttaagctca tcttcagagc
    20041 ctgcacctgc tactaataca ccaattttcg caccgtgtaa gtattgagca ataacttcgc
    20101 cttctaagta ttgaacacgg cgaatgttca tattctcacc gattttcgca actaatgccg
    20161 cacgtttttc ttcaaattgt gcttgtaatg cttcgatagt tgtaccttta tttgcaactg
    20221 caaaatcagc aacttcgttc gctaattcta agaaaccggc atcttttgca acgaagtcag
    20281 tttcacagtt catttcaact aatacgccaa aacctgaagc gacacgagca aggattacac
    20341 cttcagctgc aacacgacct gcttttttag ccgctttcgc ttgaccggat ttacgcatat
    20401 tatcgattgc taattcaata tcaccgttcg cttcaactaa tgctttttta cattccatca
    20461 tacctgcgcc ggtacgttca cgaagttctt taactaatga tgctgtgatt tcagccattt
    20521 taaattcccc ttatttgata tggtaaaaca ggctctcacc tgcctagaaa tttcattgtt
    20581 tagggcaggt taaaacctgc cccctcaact gaattattcc gcagaagctt cttctgctac
    20641 ttcaacagtt tcaacaccgc gaccttcttt gattgcagca actgctgaat ctaagtaaag
    20701 ttggatagca cgtgttgcat catcgttacc gggaatgatg tagttaacgc catctggagt
    20761 tgagttagta tcaacaatcg caaataccgg aatacctaag ttgtttgctt ctttaattgc
    20821 gatatgttcg tgatcagcac cgataacaaa aattgcatcc ggtaaaccgt tcatatcttt
    20881 gataccgcct aagcttaact ctaatttttc taactcacga gtacgcatta acgcttcttt
    20941 tttagtgatt ttgtcaaaag taccgtcttg agtttgagtt tctaaatctt ttaagcgttt
    21001 gattgattga cgaactgttt tccagttagt caacatacca cctaaccaac ggtggtttac
    21061 gtagaattgt tggctctcta ctgccgctgc tttaacagca tcacttgctg cacgttttgt
    21121 accaacaaat aatactttac cattgttact agcaatgcga gttaattccg ctaatgcttc
    21181 gttgaataaa ggtaaagttt tttctaagtt gattacgtga acaccattac gagcaccaaa
    21241 gatgaatggt ttcatttttg ggttccagta acgtgtttgg tgaccatagt gaacgcctgc
    21301 gttaagcata tcgcgcatag aaacttgtgc cataagaatt ttccttcaaa gttgtttgtt
    21361 ttgccactta tgaacggcaa aacggggttt agcctccaca tatcctagaa aatcaatctg
    21421 ttaaagacac cccaattcct agcttgtgat atgtgtgtgt tttagtgtta aaaaataaat
    21481 gtgtacgttt tgcctgaata gacaaaaacg gggcgtatta tgccaaaaaa caaacaattt
    21541 gccaattatt ttattgctct cttcgcatta ctaaatcaag ctcaaaaata aaaaccgttc
    21601 tcattattga ctaaaaaaat ggggaggttt agaatgtctt tcattctgtt atgaaaacct
    21661 gtctgaagga gactatcatg aaaaaaacac tttctgcact tgctattgct gcagccactt
    21721 ttacatcaac ttcaacgctt gctgcaaatg aagtgaatgt ttattcttac cgccagcctt
    21781 acttaattga gccaatgcta aaaaactttg aaaaagatac tggcattaaa gtaaacatca
    21841 tcttcgctga taaagggttg gttgatcgtg taaaacaaga aggtgaatta agtcctgctg
    21901 atgtgctttt aacagtagat atttcacgcg taatggaaat tgttaacgct gatcttgcac
    21961 aaaaaattga ctctaaagtg ttagaaaaaa atattcctgc acaattccgt gactctaacg
    22021 accaatggtt tggtttaacc acacgtgctc gtgttatcta cacgtcaaaa gatcgtgtag
    22081 gtaaattacc agcaggcttt gactacctag atttagctaa accagagtat aaaggtaaag
    22141 tctgcgtgcg ttcaggcaaa aactcttaca atgtctcact attcgcggcg atgatcgaac
    22201 attacggcat tgaaaaaacc aaagcattct tagaaggctt aaaagcgaac ttagcacgaa
    22261 aaccacaagg tggtgaccgt gatcaagtaa aagcaattaa agaaggcatc tgtgattact
    22321 ctatcggtaa cagctactac tacggcaaaa tgttagatga tgagaaacaa aaatcgtggg
    22381 ctgaagcagc gattattaat ttcccgagtg gtgaacacgg cacgcacaaa aacatcagcg
    22441 gcgtagttat tgcaaaacac tcaccaaata aagcaaacgc ggtgaaatta attgaatacc
    22501 taagtggcga aaaagcacaa ggtttatatg ctgaacttaa ccacgaatat ccagtaaaag
    22561 aaggcatcga gccatcagca atcgtaaaag gttggggtac gttcaaatca gataccatca
    22621 aacttgaaga tatcgcaaaa aattacgaag ccgcattaaa attagttgat gaagtgaaat
    22681 ttgacgattt ctctgagaaa aaataatcaa ccgataagcg gtcatttttc cacaaaaatt
    22741 tgcaaaattt tgttaaaata caaccgcttg caaaaggacg cattttgcgt ccttttattt
    22801 ttttatgaaa taacaggctt aaagaaaaat gcgatcacaa ttttgctgga aaagtattgc
    22861 tgccctaaca acttttatcg ttttgcttcc tcttattgca atttgctatc acgcattgca
    22921 aggggataat gaaaaccttg ctcacctttg gcaaacaatg ttgccaatct atcttaaaaa
    22981 ctcaacttta ttagtattag gaaccgtttt ccttgcactg atttttgctc tgcctaccgc
    23041 ttggattgtg gcaaattacc gtttttgggg gcaaagaacc ttacaatggt tactttgttt
    23101 gcctctcgct atgcctgctt atttaattgc ctatttatat accgatttat tagattactc
    23161 aggtgctttt caaggctggc tgcgtagtat ttttggctgg actcatccgc aagattactg
    23221 gtttcctcaa attcgtacat tgtatggtgc ttgctttgtg cttgcgttag tactatatcc
    23281 atacattttt ttattagtgc gagttgcctt attagaacaa tctgaaaact taacacacag
    23341 tgcaaaaatg ctcggggctt cgccctctca gttgttccgt cgaattacgc tgccattaat
    23401 tcgaccttct gttgccgtag gcattgcatt agtggcaatg gaaacgcttg gcgatttcgg
    23461 tactgtggcc tattttgccg tgccaacact tactacggca atttatgatt cgtggctagg
    23521 ctatcacgat cttggtactg ccagccagat tgcgatcttt atgttgctaa tgattttcct
    23581 gtttttaagt ttagagcaat atagtcgccg taaacaaaaa agctatcaac gtggctatga
    23641 aaagaaatca gcctttaaat ttttaactgg ttggaaatta gcattagccc ttgcttggtg
    23701 ctggggttta ttggcgttag cctttttcat tccgtttggc aggttgctct attgggcata
    23761 cgactatttc gagcaagcgt ggaatttaga ctttgtccaa ttttcgctta atagtttgaa
    23821 agtatcgatc atcgcctccg tgataacggt actgattgct ctacttctgc atttttctaa
    23881 acgtttgaat acccgcaaaa ttttagtcaa aaatgaccgc ttgtcattac aacttgcctc
    23941 actgggctat gcggttcctg gcacagtatt agcgatcggt ttactttcgc ctttaacatt
    24001 tgccgatcat caactccatg cttggctaaa aagccttgaa ttatcacccg ttggattgat
    24061 tttttcaggc tcactctttg cattagtatt agcttatacc atccgatttt tagcaatggc
    24121 aattggcagc cttgaaactt cgctaaataa aatctctcca tcgctggata tggcgagcca
    24181 aacgcttggt aaaaatggct cagcaatgtt agtaaaaatt catatccctt taatttataa
    24241 aggtatttta actgcaggat taatggtctt tattgagagt atgaaagagc taaatgcttc
    24301 tctgctactt cgcccattta attttgatac actcgcaacc tatgtgttta cctttacatc
    24361 agacgagcag cttgagcgtg ctgctctgcc tgccatcgta ttggtgttag tcggtttact
    24421 gcctgttatt tggcttacca gatcccttat ttcgcaatct gaaaaagaaa gataaaggaa
    24481 ttttatgtct gttttaacta ttaatcatct caacctcaat ttcggcagta caaaggtttt
    24541 acaaaatctc catcttgctg tgaatcaaaa tgaaattatc tgtttgctag gtgcaagtgg
    24601 ctgtgggaaa actacactgc tcaaagccat tgcaggttta ttgccaattg agcagggaga
    24661 tattcattta gcgggtgaat gcctaaaaag taaagccgtg gaagagcgac aaatcgggct
    24721 gattttccaa gattacgctc tttttccaca cttgacggta gccgataata ttcaatttgg
    24781 cttatccaaa ttgccaaaag tacaacaaaa agcaattacc gaaaaaatgc tttcagttgt
    24841 gcatttacaa ggctttgaaa gccgttttcc acacgaactt tcgggcgggc aacaacagcg
    24901 tgtcgctatt gcccgagcat tagcctgcca gccagaattg ctactgttag atgagccgtt
    24961 ttccaatatt gacagccaaa ctcgctatgc aatgattcaa gagatcaagc aaatcttaaa
    25021 aagccaaaat gtgcccgcta tttttgtaac ccatagcaaa gaagaagcct ttgcatttgc
    25081 cgataaaatt gccgtgatgg atcaagggaa aattattcaa tttggtaagc caaacgagct
    25141 ataccattct ccagttaatc catttgtggc agatttttta ggtggcacaa actatcttaa
    25201 ctgtaatgta acggaagaca acgtgttatg cagccctatt ggcgagttcc gactcttccc
    25261 tgaaatgaac gttcagaaag ggcgttaccg ttggcttctt cgcccagaac agattatctt
    25321 aaaacccaat gagctaggtt taggtaaagt ggtaggcaaa ctgtttttag gcctatacta
    25381 ccgctatcag gttgaaatta aaggcattga gatagtaact taccaatctc aagagctgaa
    25441 aattggcgaa caagtggaag tgggcttcca agtaagagag tttatcctat tttaaggaga
    25501 atatatgaaa attgaagttt ggtcagatta tgcctgcccg ttttgttaca tcggcaaacg
    25561 ccacttagag caagccctag cccaatttga aggcgaggtt gaagtggttt tccgagcctt
    25621 tgagcttgat ccgcacgcta acggcgaacc ggagggcgat attcagcaac gcctaatgcg
    25681 gaaatatcaa aaaaccgcag aacaagctga tgaaatgatt cgttatgtgg aacaagccgg
    25741 caaacaagct gggctagatt tgcgttaccg caccacccaa tacactcgca cctttgaagc
    25801 tcatcgcttg gcgaaatttg cagaaagtaa agacttaggc gaagcaatgg ttgaacgttt
    25861 attcaaagcc tattttaccg ataacactat tctagctaaa cgcacagagc ttatcagttt
    25921 agccttagac attggcttag agcgtgatga aatcgctcaa ctgctcacag gtgatgattt
    25981 cgggcacgaa gtccgtgaag atgagcgagt cgctcacaaa tatggcattc acagcgtacc
    26041 gttttttgtg atcaatgaaa aactcggggt atccggggct caaccgccag aaatattact
    26101 tgacgctatc aaacaggcat tgcaaaaata atccgaaaaa agaccgcttg ttaagctaaa
    26161 caagcagtct tattcttctt ataatttaca atttattttt tggtgatcgc acctaaaata
    26221 ccacgcataa tttgtttggt gacttggttg cgtaaatttc tgccaactga atgcgccact
    26281 tggctaacca cttgttcggt aatcgattga tcttttttct tcttcgagcc aaaaatggaa
    26341 gagagaatac cgccaaagaa gtcattgttt gcttcttctg ccgcagcctg ctctgcttta
    26401 attgcttctg ctttcgcatt aagtaattca aacgcagatt cattatcgac atattggctg
    26461 tagtgatgat agagatcatc ttgcttcact aaactatcac gttcgcctgt ggctaatgga
    26521 gctaattggc tttttggtgg atagatatag gcaatttcta caggcgttgg catacctttt
    26581 tcatctagca ccgaaaccaa cgcttgcccc acaccaagtt gcgtgatggc ttctaccaca
    26641 tttacctctt tattcgctcg gaaagtttcc gctgctgatt ttaccgcttt ttgatcacgt
    26701 ggcgtgaaag cacgcaaagc gtgttggata cgattgccaa gctgccctaa tactgaatca
    26761 ggtatgtcca acggattttg cgtaacaaaa taaacaccca ccccttttga gcgaattaaa
    26821 cgaaccacct gttcaatttt atccaccaat gccttagggg catcgtcaaa caataaatga
    26881 gcttcatcaa agaataaaac aaacgtcggt ttttctgggt cgccaacttc tggcaaattc
    26941 tcaaagagct ctgccataaa ccaaagcagg aatgcactgt acactcttgg tgagttaatt
    27001 aatttttctg cattcaacat attgattaca ccacgcccat tacgggtttg gatccaatcg
    27061 tgcaaatcta atgcaggctc accaaataaa ttatctgccc cttcattttc aagccttaat
    27121 aacgcacgct gaatagctcc aacgcttgct gcagaaatat gcccatattc cagttggaat
    27181 tctttcgcat tatctgcgac aaatttaagc aacgcacgca aatcttttaa atcaattagc
    27241 aataaacctc tgtcatctgc cacacgaaaa acgagattta acaagcctcc ttgggtatcg
    27301 tttaaattga gtaaacgaga aagtaacatc ggtcccattt cggaaatagt gattcgaagt
    27361 gggatacctg atgtaccaaa tacgtcccaa aacgaaactg gatagccctt taagtaatct
    27421 tctcccccta aattaaactg taaaatgcgt tctgcaattt ttcctgaaaa attacccgct
    27481 tgtaccgagc ccgaaagatc accttttaca tctactaaaa atactggcac gccatcatca
    27541 ctcaaagatt ctgccaattt gcgtaaagta accgttttac ctgtacccgt agccccagca
    27601 attaaaccgt gccgatttgc cattttggca ttaagcgaaa taactttgcc tgtttctgtt
    27661 cgagcaattt gatacaaact catctttcat tctcttaaag gtaaattaat tttttgttct
    27721 catcatataa aaatttatca cttaattacg gctattcttt ttcgtttttg ccaagaacgt
    27781 ttttttactt cttgagcggt tcactttcgg taaagtcagt aaggattcct tgtcgtattg
    27841 actcacagga atctgatgcc caatatactc ttcaattgca ggcaaattaa ccgcataacg
    27901 ctcgcaagca aaactaattg aatggccgct ctcccctgct cgccccgttc taccaatacg
    27961 atgaacgtaa tcttctttat catcaggcag atcataattg aaaacgtgcg tgacatctgg
    28021 aatatgcaat ccacgagccg caacatctgt taccactaaa atatccaaat tgcctttggt
    28081 gaaattatcc agcaaagaaa ggcgtttttt ctgcggaata tcgccggtta gcattccaac
    28141 ccgatgtccg tctgccgata aatactgcca gatctcttcg catttatgct tggtgttggc
    28201 aaaaatcata caacgctccg gccactcttc ctcaagcaat gtcagcaaca atgccatttt
    28261 gtcttcattc gaggggtaaa atagctcttc tttaatacga tgtccggttt tttgtagtgg
    28321 ctcaatttca atatattccg cattatccat atcttcatag gcaagttccc gcacttttgc
    28381 cgaaagcgtt gccgaaaaga gcaaagttaa acgttctgaa ggcttaggtg cttttcgcat
    28441 taaataacgg atatctttaa taaaaccaag atcaaacatt cgatctgctt catctagcac
    28501 aatcacttga attttgtcta aattgataat gccttgtttt acatagtcaa tcactcgacc
    28561 tgttgtaccg acaagaatat ctaccccttt ttcaatttct tgaacttgtt tgtcgtaacc
    28621 atcaccaccg tatgccaaag ctagttttaa atcagaatgt tttaaaaaca gctcggcatc
    28681 tgccccaatt tgaaccgcca attcacgggt tggagcaaga attaatgctc tcggctgatt
    28741 ttttgacgtt tcgatttcgt tattcaataa atggttaaaa gttgcaatca aaaaggcaag
    28801 cgttttccct gtacctgttt gagcttgccc tgcaatatct ttgcctttca gcgtaatcgg
    28861 aaaggttttt gcctgaatcg gcgtacaaaa ttcaaagcct ttgctatcaa gggcatttag
    28921 tacattagcg tgaatcggga agtcaataaa gcggtgttcg gtaagatgat tagacatagt
    28981 atttccttga taattgtgat gtgacaagcg gtctttttta cacatttttt tgcaaaatag
    29041 catattgggc gttttttctc aaatttaacc gcttttgagt ttattcggca aaatagattg
    29101 gaaaagctct cggcttttca gcggttgtga ccctaaatag ggctttagtg ccattcgggt
    29161 aaaacgtttc gctgcttgtt gagtactttt ttctgaaaaa tccaactgag caaacgctaa
    29221 taaatcactg cctaaaaagc tctggttatt ctgtaataat gaggcgataa agccctgatt
    29281 ttcctgaaat tgataggtca ttttcggatc aactggcaaa ccggttgccg cacagtgcgt
    29341 aaaatccacc ccataaccca atgcttttaa cgtatgaaat tcaaaggtgc gtaaaatcgg
    29401 ctcaatctgt ttttgtgtgg caagctcggt aatgcaacgt aaataatgct gaaataattc
    29461 agggtaagcg gtctgatttt ccaatactct tgcaagtacc tcgttgatat aaaacccact
    29521 ataaagtgaa agcgtttcca tcggcaacgt taatgcagcc ggttctgctt tggttaaagt
    29581 tttcagatcc cctttacccg accaacgcaa caacaacggc gtgaacggct gtaaaaccgc
    29641 tttcaacggc gagcgagccc gccttgcacc tttagcaagt aaagtaatcc gcccgtgatg
    29701 ttcggtaaaa aactccacta ataaactgtt ttcgctgtat tcacgccgat gaaggacaaa
    29761 ggctcgttgc cattggtcta ttgtcataat ttcttgttaa ttatgaggtt gtaatttact
    29821 tctgccaaat ctccccctcc cctctttgct aaaga
//
LOCUS       DANLTI010000013        28850 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.013, whole genome shotgun sequence.
ACCESSION   DANLTI010000013 DANLTI010000000
VERSION     DANLTI010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28850)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28850)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28850
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.013"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(161..832)
                     /locus_tag="PXB09_000493"
     CDS             complement(161..832)
                     /locus_tag="PXB09_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDL5232642.1"
                     /translation="MKKSTLAIILGGALLTGTAVAHQAGDVIFRAGAVHVKANSSSDA
                     KSKAATGIDVDLEVKNNTQLGLTATYMLADNVGIELLGATPFSHKINAKAKVLESGAE
                     VDLDRVVILKQLPPSLYAQYYFFELTAKVKPYVGAGLNYTRFYHAKSVSPAVTDLSVK
                     KHSFGPVANLGVDVKLTDNIYFNAAAWYTRIKTTAKFKAAGADHEVKVKLDPVVLFAG
                     FGVKF"
     gene            1087..3654
                     /gene="clpB"
                     /locus_tag="PXB09_000494"
     CDS             1087..3654
                     /gene="clpB"
                     /locus_tag="PXB09_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDL5232643.1"
                     /translation="MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGG
                     SIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQVSQQLVRLLNQSDKLAQQFGDS
                     FISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK
                     KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFID
                     EIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKV
                     LVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI
                     DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKE
                     REYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLE
                     KQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLH
                     ARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDD
                     PDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAH
                     PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVM
                     EVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAAL
                     DHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ"
     gene            3868..5010
                     /locus_tag="PXB09_000495"
     CDS             3868..5010
                     /locus_tag="PXB09_000495"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDL5232644.1"
                     /translation="MSQLFPEATIRTQAPYRNDIVGSFLRTDALKKAREDFNQQKITR
                     DELREVTRQEVKKLVELQKQHGVKAVSDGEFSRTWWHLDFLAELDGMDWQETEVFNVN
                     FTGHKPKGQTVKIVGDIDFSESHPFVDAYRLLKEAAGDYPTKFTIPAPTMLHIICCVR
                     AEDYQPLPQYQDEQKLYDDIANAYIKAMHKFYDMGLRNLQLDDTSWGQFCAEDKRKEF
                     AARGFNLTDLAEKYVALLNRIVDAKPADMSITMHICRGNFRSSWFSEGGYGPVAEVLF
                     GKCRVDGFFLEYDTERAGTFEPLRHIKDQQVVLGLITSKFGDLEDKNVIIERIKEAAQ
                     IVPINQLCLSPQCGFASTEEGNILTEAAQWAKLNLIKEIAEEVWGS"
     gene            complement(5067..6458)
                     /locus_tag="PXB09_000496"
     CDS             complement(5067..6458)
                     /locus_tag="PXB09_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDL5232645.1"
                     /translation="MENTPLIEPSKNTRNSLIFVADAILFIILLNTLPFTPEANKGLA
                     LLIFIAVLWLTEALHVTVTALLIPILAVALGLVKSKEALVAFADPTIFLFFGGFALAT
                     ALHIQQLDRMIANKIMALAKGKLSIAVIYLFAVTAFLSMWMSNTATAAMMLPLAMGIL
                     SKLDQKQNHNTYLFVLLGIAYSASIGGMGTLVGSPPNAIVASQLNLTFADWLKYGLPI
                     MLILFPLMIATLYIVFKPNFSVSFDRSFEKIELNRSRIITLAIFVFIALGWIFGDKIN
                     PIISAFLGINGKIASFDTILALIAAALICITRVANWQQIQENTEWGVLFLFGGGLTLS
                     AVLGQTGASKIMADGVVSLIEGGHFYLIGLIVAAFIIFLTEVTSNTASAALLVPIFIS
                     IAQALNMPPVGLALIIGLGASCAFMLPVATPPNAIVFGTGQIKQSEMIKVGFWLNIIS
                     IFVIATVGYLFWL"
     gene            complement(6618..7517)
                     /gene="cdd"
                     /locus_tag="PXB09_000497"
     CDS             complement(6618..7517)
                     /gene="cdd"
                     /locus_tag="PXB09_000497"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDL5232646.1"
                     /translation="MFRTDITERFEQLKAAKNCEVTQAIIEQLIKQDFHGQLSYEVVD
                     ELCEKFKRSRVELALYCIAIAACYAVTPVSDFNVGAVAIGKNGDFYFGANQEFSGECM
                     QQSVHAEQSAISHAFLAGETLITDVVVNYTPCGHCRQFMNELNSAASLKVHLPHSQNN
                     LLHSYLPDSFGPKDLGIEKVLFDEQPQQFEVKGDHLQQAAIFAANNAYAPYSNAFSGV
                     ALQVGERIVCGKYTENAAFNPTFLPLQSALNYRLFLGLADIPVTRVVLAEAKGSLSSY
                     AMTQALAKSLFGLEIEYLSLQAV"
     gene            complement(7531..8433)
                     /locus_tag="PXB09_000498"
     CDS             complement(7531..8433)
                     /locus_tag="PXB09_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5232647.1"
                     /translation="MISSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLRW
                     LPAFLILVLLFFRPTWRVMHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASL
                     YLAISPVLVLFLNRLVFKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDL
                     WAIASTISWAVYCCVIRLRPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLAN
                     LTALQWSGIGYLVIGPSILSYAFWNFGIAIVGSAKGAVMTNFTPLFAAMFSIILLNES
                     VHTYHIISAILITAGILICSYKKH"
     gene            complement(8430..8786)
                     /gene="folB"
                     /locus_tag="PXB09_000499"
     CDS             complement(8430..8786)
                     /gene="folB"
                     /locus_tag="PXB09_000499"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDL5232648.1"
                     /translation="MSDKVFIRELTAFASIGAYNWEHTIKQRLVFNIDMAWDFSKAAE
                     TDDVQYCLNYAEVSQKVLDFVESQPFKLVETVAYQLAELLQKEYQLSWIRIELHKPKA
                     VAQASSVGVIVERGHQ"
     gene            8856..9461
                     /gene="plsY"
                     /locus_tag="PXB09_000500"
     CDS             8856..9461
                     /gene="plsY"
                     /locus_tag="PXB09_000500"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDL5232649.1"
                     /translation="MNLIPYLLILTAYLLGSISSAVIFCKLAGLPDPREVGSHNAGAT
                     NVLRIGGKSAALGVLLFDILKGTLPVAMGIYFELSPSQLGFIALAVCLGHIFPIFFQF
                     RGGKGVATAFGAISALSFIVAGGAIGTWLLVFLISGYSSLSAVFTALVVPFYIWWFEP
                     QFTFPVALVCCLLVYRHHDNIQRLWRGQEDKLWDKFKKNRA"
     gene            complement(9535..11442)
                     /gene="parE"
                     /locus_tag="PXB09_000501"
     CDS             complement(9535..11442)
                     /gene="parE"
                     /locus_tag="PXB09_000501"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDL5232650.1"
                     /translation="MSEKRYGADEITVLKDLEPVQLRPGMYTDTTRPNHLGQEVIDNS
                     VDEALSGFADKIDVILHADNSLEVVDNGRGMPVDIHSTEKISGVELILTKLHAGGKFS
                     NKNYTFSGGLHGVGISVVNALSERVEIQIKRGGEVYSIAFANGVKVEDLTVIGTCPKK
                     QTGTTVRFYPNPKYFDSPRFSVSRLRHLLRAKAVLCPKLTINFIDKINNTEESWYYED
                     GLSDYLSEALNGYETVPNPPFIGDVTAETEAVSWALTWLPEGGELVAESYVNLIPTAQ
                     GGTHVNGLRNGLLKAMVEFCEIHNLLPKGVKLTADDVWNRCAYVLSLKIQEPQFAGQT
                     KERLSSRQASSYVDSTLKDAFSLWLNQNVQTGKLIAEMAISSAQSRMRAAKKVVRKKL
                     VSGPALPGKLADCTAQDLSRTELFLVEGDSAGGSAKQARDKEYQAILPLRGKILNTWE
                     VSSDQVLASQEVHDIAVALGIDPDSDNLEELRYGKVCILADADSDGLHIATLLCALFL
                     RHFPKLVQNGHVYVAMPPLYRIDIGKDEVHYALDEAEKEAILARLAKKKGKPNVQRFK
                     GLGEMNPSQLRETTMEPSTRRLVQLTFDDTVEEGELNTFEIMDMLLGKKRAEDRKQWL
                     QNRGDEADLAV"
     gene            11650..11874
                     /locus_tag="PXB09_000502"
     CDS             11650..11874
                     /locus_tag="PXB09_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5232651.1"
                     /translation="MVVKILKRKSQKTLQQIYTQPISANIKWTNIEALFLELGAEIEE
                     REGSRIAVVLFQQVRVFHRPHPNPDTDKGR"
     gene            11917..12246
                     /locus_tag="PXB09_000503"
     CDS             11917..12246
                     /locus_tag="PXB09_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5232652.1"
                     /translation="MRNIMDINGYKAVIAYDPETELFRGEFIGLNGGADFYADNVIQL
                     KKEGELSLNIFLELCREKGIEPFKQYSGKFNVRLSPELHKAAVIAATAENLSLNEWIN
                     QTLEKSV"
     gene            complement(12285..12671)
                     /gene="cueR"
                     /locus_tag="PXB09_000504"
     CDS             complement(12285..12671)
                     /gene="cueR"
                     /locus_tag="PXB09_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDL5232653.1"
                     /translation="MNISQAAEKTGLSAKQIRDYEKAGLLPPTSRTEAGYRFYNATDL
                     SRLHFISNARKVGFSLAQISELLKLNDNPNRSSRDVKQLTEQHIGELEQKIADLNQML
                     TLLKSWSSSCCGNANSECSILNGLNG"
     gene            12760..12960
                     /locus_tag="PXB09_000505"
     CDS             12760..12960
                     /locus_tag="PXB09_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5232654.1"
                     /translation="MTITLQLDGLHCGNCVKSVEKALNGVAGVNQVSVTLEPQIAVVE
                     GSAEAQALIEAVEDIGFDAKLA"
     gene            13013..15205
                     /locus_tag="PXB09_000506"
     CDS             13013..15205
                     /locus_tag="PXB09_000506"
                     /EC_number="3.6.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDL5232655.1"
                     /translation="MTSTAHYSPEQQLLIDGMHCAACVRRVEKALLKVEKVEFASVNL
                     ADQTAFVQGNANPEALVAAVVKIGFGAEVLESEEERRIKQQAQTQRVLGHKRTQFMLA
                     LVVGFALVAFGFYKGMTVNETNRSLWLSWAGISLATMYFSGKDFFLGAFSALKNRSAN
                     MDMLVAISTGTAWLYSCWLTLFPQPNAHVYFEASVMILGFINLGKYLELKAKQRSSLA
                     LEKLLDLAPKQAVIFEENIAKTIPAKAIKPQMRVQALTGDRLAVDGILDSGSIWVDES
                     MLTGEALPVEKKIGDKVRAGTLVQDGSGTYIAEQVGSQTALARVINAVRHAQSSKPPL
                     AQFVDKIAAVFVPVVVSIALLSALIWLAVGQDFAFALSIFTTVLIIACPCALGLAIPL
                     STIAGVARSAEFGVLVRNIEALQASSEIDTLVFDKTGTLTTGRMEVSDVLTFNGFEQK
                     RLLQLAKSVEQHASHPIAKAIAKFAENQTACGVTDVQVLKGLGISAKYEGSTIRMGNW
                     QFVGETIQANLASLLPAKEGDFSSKIFVSVDNQLAGVLSVSDQLRPEAKATIHQFQAE
                     GYQCVMLTGDRQQTADYFANALGLDGVIAEVLPEQKAEKIRALQAEGKKVAMIGDGIN
                     DAPALAQANVGIAMHNGSDIAVETADLSLMREGLAPLMQILPFSKKVLKNMKQSLLGA
                     FIYNVIAIPIAAGVLYPFTGWLLNPMIAAIAMTLSSITVVLNSQRLLK"
     gene            complement(15258..16043)
                     /gene="truA"
                     /locus_tag="PXB09_000507"
     CDS             complement(15258..16043)
                     /gene="truA"
                     /locus_tag="PXB09_000507"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDL5232656.1"
                     /translation="MKIALGIEYDGSRYFGWQRQEAVESVQQQLEQALSVVANSPVEV
                     FCAGRTDAGVHGTGQVVHFETQANRPLQSWCFGTNAHLPDDIAVKWAVAVNEDFHARF
                     SATARRYRYIIFNQKLRSAILPKGVTHFHFPLDERKMHQAGQYLLGENDFSSFRAAKC
                     QSNTPWRNIHHLNVSRQGNYVIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWV
                     LEQRDREKAAPTAKAEGLYLVEVHYPEHFGIPKTPLGPLFLAD"
     gene            complement(16108..16797)
                     /gene="folE"
                     /locus_tag="PXB09_000508"
     CDS             complement(16108..16797)
                     /gene="folE"
                     /locus_tag="PXB09_000508"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDL5232657.1"
                     /translation="MTTISPELTITENTLSPEAQKVRQALLAKGIETPTVTHTKDKAS
                     RRAEIQQHMQAVLELLGLDLSDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENR
                     MKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQV
                     QERFTEQILTAFQTILETDDVAVYVKATHFCVKCRGIKDTNSYTVTSAFGGVFLEDRE
                     TRKEFLGLLNK"
     gene            16898..17605
                     /locus_tag="PXB09_000509"
     CDS             16898..17605
                     /locus_tag="PXB09_000509"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDL5232658.1"
                     /translation="MQNIQYLFNADLIPEHQAEFVQSLLTCKNFDNSDRLLGFSKGRG
                     TTWFLDTSAELGINVVLRHYYRGGLFGKIIKDSYFFTRFEATRAYKEFFLLQQMLAWG
                     LPVPRPVAIKIERHFCCYRADIMLEKLENTQDLSKILQSHSLSNEQYEQIGKLIRSLH
                     NHQIHHSDLNIHNILLGNDGKFCLIDFDKCGIEPGENWKQNNLDRLLRSFKKEQGRLN
                     IFFSEENWQAVLRGYTL"
     gene            complement(17660..18757)
                     /gene="apbC"
                     /locus_tag="PXB09_000510"
     CDS             complement(17660..18757)
                     /gene="apbC"
                     /locus_tag="PXB09_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDL5232659.1"
                     /translation="MNQLNEQQLVEIKAILQQFSHPTLQKDLIALNAFKKAELGGDIL
                     RIEITMPFAWNSGFETLKAETEAKLKQVTGSSGVKWVLNYQIATLKRANKHPAVNGVK
                     NIIAVTSGKGGVGKSTTSVNLALALRAQGTRVGILDADIYGPSIPHMLGAKDQRPTSP
                     DNKHITPITAHGLQSNSIGYLMEEDNATIWRGPMASSALSQLLNETWWNELDYLVIDM
                     PPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGISMFEKVSVPVLGVIENMSMH
                     ICSNCGHHEAIFGTGGAEKIAQKYGTKVLAQLPLHIRLREDLDSGVPTVVAAPEHEIS
                     QAYLALAEKVASELYWQGSVIPSEIMIREVK"
     gene            complement(18754..20301)
                     /locus_tag="PXB09_000511"
     CDS             complement(18754..20301)
                     /locus_tag="PXB09_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5232660.1"
                     /translation="MLKSLQAVTFVKKIAKVTACILLITSCDQLICPQSIQSVWVENR
                     QSDTLLKRAIYSAVFQLDPHKIKASADAAPLRDLLVGLTAYNRKGDVVPAIAQNWFTE
                     DEKEWLFILDEKAVWSNGQPVTAQDFVASWRRLIDPQNHSVLSKYLIYMGIENAKAIE
                     EQIKSVEELGVEALNAHTLRIRLNHPNHQLPEMLAHSALLPTYQGIAPTIDNFVSNAS
                     YRLEKLDAQKMVLKARTQEIPFQTIEYDLITTIQNCSAFDIVENPLLNKKTNIVKFPR
                     LCSYYYEFNFDDPLLAKREIREAIRTMVASANSGQEYGVPSQSVIPHSLVKDREKRWN
                     PVVVEQLLTKAGISPYNPLKLTLLYDENSINIANQVTRALSQSELFNITPKMVDWQTL
                     NKVREQKDYQIARAGWCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETL
                     SAEARESLIQEISEQLYSDVAVLPLFQYHHRVGIVSSLLGIDLNNDSEVIYSKDLKRN
                     LANKDNQ"
     gene            complement(20327..20977)
                     /locus_tag="PXB09_000512"
     CDS             complement(20327..20977)
                     /locus_tag="PXB09_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HDL5232661.1"
                     /translation="MDIIINFAIYLQFFIGLFAIVNPFGSLPIFFSMTAHQYEGERNR
                     TSLITAVSIGVILLVSLYFGNLILNAFSISLSSFRVAGGILIVSIAMTMISGKLGEHK
                     QNKEEKNEDITEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHTWEDYVGFSIAIIVF
                     ALICYILFRYSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGITTLFPVLLVK"
     gene            complement(21099..22970)
                     /locus_tag="PXB09_000513"
     CDS             complement(21099..22970)
                     /locus_tag="PXB09_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDL5232662.1"
                     /translation="MIEKMHERTNGPVFKIIFALVSISFVIGGIGTGLISQDNSVAKV
                     NGEEISQQLFNNTLNREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQ
                     YAKELKLGISADQIKSEIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGML
                     QSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYE
                     ANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQ
                     VASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVAN
                     LTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYFTVARE
                     MANKAFENNSSLEEVAKAGNVELQKTDLFTRENVPTALQNEKVLKVLFEGELRQNKQN
                     SDALDVGNDANPQTLFVRVSDYDAERPQTFDEAKAAVENFVKAEKAEKALLAKVEENV
                     KALNEGKSVDVKFNAPQTLVYMQAEVENPVLAGTIFAMKKAQDKTTYQMARNQKGDVV
                     IVALDNITEGNAEQFKTLAPQFEQANRLILRNEFLQSLRAKASIEVNEDFMQQRSSH"
     gene            23152..23421
                     /gene="rpsO"
                     /locus_tag="PXB09_000514"
     CDS             23152..23421
                     /gene="rpsO"
                     /locus_tag="PXB09_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDL5232663.1"
                     /translation="MSLSVEAKAKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFA
                     EHKKDHHGRRGLLRMVSRRRKLLDYLKRTDLAKYSETIARLGLRR"
     gene            23493..24362
                     /locus_tag="PXB09_000515"
     CDS             23493..24362
                     /locus_tag="PXB09_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDL5232664.1"
                     /translation="MAFASLFTLLDDIAAVLDDVSIMTKVAAKKTAGVIGDDLALNAN
                     QVSGKNVVPERELPIVWAVAKGSLINKVILIPLALLLSVFLPQAIIPLLMIGGAYLCF
                     EGVEKLLHRLLHKNNQAHSDETETLSEKDKIKGAIRTDFILSAEIIIIALGVLQDSST
                     LTQILSLSAIGVGITLFVYGLVGLIVKLDDIGLWLMQKKSTFSQAVGKGLLFAMPWFM
                     KGLSVIGTIAMFLVGGGIFTHNLPMIHHFVEQFGISPHFSTLVDFAVGIVVGIIACLI
                     ILPLMKLFSKKAH"
     gene            complement(24452..25717)
                     /locus_tag="PXB09_000516"
     CDS             complement(24452..25717)
                     /locus_tag="PXB09_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDL5232665.1"
                     /translation="MFRTLFLMLLLLVGLISGPYLAGNQGYVRIETATTVIEMSIVML
                     VVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSK
                     AEKLFSKNAKHADEPVLNLIKAAEAAQQNGDDLAANKYLIKATEIAGPNNVAVELVRT
                     RILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQIYKESRAYVALDRLLVEIGQRNF
                     LTAEEYAELEYFVDDGLQDERLQEEGQEGLLSWWENQPNRRRKSVYSRVGVIKRLIDS
                     DDHQSAQEIALETLKKFEDEQLQGLFVQLTRLQIDSDSKLLKVLAKRADKANVKYTDD
                     YARALGYIYTRDGQYQKAKSQFELLLAHDECVADDRIMALHVAEQMGDTLMANRIREE
                     NLKQVNMATQSKVNEPLALPQTATESNSL"
     gene            complement(25736..27046)
                     /locus_tag="PXB09_000517"
     CDS             complement(25736..27046)
                     /locus_tag="PXB09_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDL5232666.1"
                     /translation="MSRSKKVTEHLEHSAEKVVEEAQQAVDSAGSFAKKEIEEDVVNE
                     AIEKDIQTEMQKAPKEQVVVQKSGGKGLALVALLVALAVGGAGHYMANKKFAEVESQI
                     QAVSAKANQPTTQTMVEMPNFENEKAQIAELVTEYQKALERIKALETAQNGYTQQISS
                     LQLQLQKLNNTSGSDNTFWLLSEADFLLNNAARKVVLDNDIETAKNLLLEADQVLSKA
                     PNTIHIREAIKTDLNTLTALHQIDQNALMQRVANLANKLDDLPILESEQASNSKQDGQ
                     VSDSLADWEKNLEKSAASFLDHFIRVSKRNAADEKAFVAPNQEIYLRENIRLRLQIAI
                     LAVPRQQSELYKKSLQTVGSWVRSYFETSNENVQHFLKELDELAEQTIYVDAPTSLQS
                     LKVIAQQLNKTPEKIEKVEIKAEKELEQAEPVKAEQDAMPLSAQ"
     gene            complement(27058..27822)
                     /locus_tag="PXB09_000518"
     CDS             complement(27058..27822)
                     /locus_tag="PXB09_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDL5232667.1"
                     /translation="MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLP
                     SAISRLKSDDYVFVVSPNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQA
                     VIYPIEFENSEGVLALPEMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRR
                     EPVTDDIPEKISLCKRLGVDTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIA
                     KIAKQMGWQEDKIRVSDKADNVTLMNTLLFKVGKSN"
     gene            complement(27822..28757)
                     /gene="hemC"
                     /locus_tag="PXB09_000519"
     CDS             complement(27822..28757)
                     /gene="hemC"
                     /locus_tag="PXB09_000519"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDL5232668.1"
                     /translation="MKDILRIATRQSPLALWQANFVKSELEKHFPQLSVELVTMVTKG
                     DIILDTPLAKIGGKGLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICERED
                     PRDAFVSNNYHSLEDLPKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDN
                     GEYDAIILASAGLIRLGLQERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKL
                     NHSSTACCVMAERAMNTRLQGGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAK
                     GHKQEAEQLGILVAEQLLAQGADKILAAVYNENVQ"
BASE COUNT         8527 a         6233 c         5523 g         8567 t
ORIGIN      
        1 tttcaagcaa gatttaccaa ttacaccaat aaatatttgc atagtgagat tttattatct
       61 cttcaattat ttaattaaaa gtggaaaggg ctatattcaa acaactttaa caaaaaagga
      121 ctaatcacta agattagccc aactcgttcc caacaaataa ttagaacttc accccgaaac
      181 cggcaaataa gacaaccgga tcaagtttta cttttacttc gtgatctgca cctgctgctt
      241 taaattttgc ggttgtttta atgcgtgtgt accaagctgc cgcgttgaag tagatgttat
      301 cggttaattt tacatcaaca cctaggtttg ctaccggtcc gaaagaatgt ttttttacac
      361 ttaagtcagt aacagcaggg ctaactgatt tagcgtggta gaagcgagtg taatttaaac
      421 ctgcaccaac gtaaggtttt acttttgcag ttagctcaaa gaaatagtat tgggcataaa
      481 ggctcggtgg taattgtttt aagataacaa ctctatccaa atctacttct gcacctgatt
      541 ctaaaacttt ggctttggca ttaattttat gagagaaagg ggttgcacct aataactcaa
      601 tacccacatt atcggctaac atataagttg cagttaagcc taactgagta ttgtttttca
      661 cttctaaatc tacatcaata cctgtcgctg cttttgattt tgcatctgaa cttgaatttg
      721 ccttaacatg taccgcaccg gcacggaata tcacatcacc tgcttgatgt gccaccgcag
      781 ttccagttaa taatgcccca cctaaaataa ttgctaaagt tgattttttc attttcatat
      841 cctcaaaaat aattagaata cctataatga ggtaaacttt agcgaagtgt aaatgaaatg
      901 aaatagaaat gaattgatat ttatcaaact tttaacacaa agatacccaa caagagttat
      961 tttatttatt tttgtgatct ttttcacatt tttacttgaa aattgtttac caagctccat
     1021 ttagtgtttc aacaagagat gtaaataaaa atttacactt tctaaactca ttgtaaggag
     1081 aaagaaatga attttgaaaa aatgaccaca aaactgcaag aagccttggc tgaatcacag
     1141 tcgcttgcgg taggaaaaga taatccgtac atcgaaccgg cacatttgct ctatgcgttg
     1201 ttaaaacaag aaggtggctc gattgcttct ttgtttacca cattaaatgt tgatgtaccg
     1261 actttaattc gtgaattaca acaaatttta gaccgcttgc cgaaagttca aggcggtaac
     1321 acccaagttt cacaacagtt ggtcagactg ttaaatcaat cagacaaact ggcacaacaa
     1381 ttcggcgaca gctttatttc atcagaacta tttgttctag ctgcacttga tgacaatggc
     1441 gatttgggga aactatttaa acaatttggc ttaaacaagg aaaaactaac acaagccatc
     1501 agccaaattc gaggaggaga cacagtgaat aatcaaaatg cggaagatac ccgccaagca
     1561 ctcaaaaaat atacgattga tttaaccgaa agagccaaag ccggtaaatt agacccggtt
     1621 atcgggcgtg atgaagaaat tcgccgtgcg gtgcaagtct tacaacgccg taccaaaaac
     1681 aaccctgtgt taattggtga accgggtgtg gggaaaacgg cgattgtaga aggcttggca
     1741 cagcgtattg taaacggcga agtgccggaa ggcttgaaaa ataagcgtgt actttcgctg
     1801 gatatgggag cattaattgc cggtgcgaaa tatcgtggtg aatttgaaga gcgtttaaaa
     1861 gcggttttaa acgacctggc gaaagaagaa gggcaagtta tcctctttat tgatgaaatt
     1921 cacacgatgg ttggagcagg caaaacagac ggagcaatgg acgccggcaa cttattaaaa
     1981 ccaagccttg cccgtggtga attgcactgt gtgggggcta caacccttga tgaatatcgc
     2041 caatacattg aaaaagacgc agcccttgaa cgccgtttcc aaaaagtatt ggtggacgaa
     2101 ccaacggttg aagatacgat tgcgatttta cgtggtttga aagagcgtta tgaaatccat
     2161 catcacgttc aaattacaga ccctgccatc gtggcggcgg caacgctttc gcaccgttat
     2221 gtgtctgacc gtcaattgcc ggataaagcg attgacttga ttgatgaagc cgcttcaagc
     2281 ctgcgtatgg agattgattc taaacctgag ccgttggata aattagaacg ccgcattatc
     2341 caactcaaat tggaacgcca agcgttacaa aaagaggaag atgaagcgag ccgtcagcgt
     2401 ttagccaaat tagacgaaga aatggcagcg aaagagcgtg aatattccga gctggaagaa
     2461 atctggaaag cggaaaaatc cgccttactt ggtacacagc atattaaatc ggagttggaa
     2521 aatgcccgaa ttgcgatgga tcaggctcgc cgtgaaaacg atttcgagaa gatgtcggaa
     2581 ttgcaatatg gcgtgattcc aaacttggaa aaacagttac aagcggtcga aaatggcgaa
     2641 aaaaatgcag atgctcagct cctccgtact aaagtcaccg aagaggaaat tgcggaagtg
     2701 ctttcaaaag caacgggcat tcctgttgca aaaatgatgg aaggcgagaa ggaaaaactc
     2761 cttcgtatgg aagaagtatt acacgctcgg gttatcgggc aaaatgaagc cgttgatgcg
     2821 gtggcaaatg cgattcgccg tagccgtgcc ggactttccg atccgaataa accgattggt
     2881 tcattcctat tcttaggacc gaccggcgtg ggtaaaaccg agttaagcaa aaccttagct
     2941 aatttcttgt ttgacgatcc tgatgctatg gtgcgaattg atatgtctga atttatggaa
     3001 aaacacagcg tatcccgctt agtgggcgca cctccgggct atgtcggcta cgaagaaggc
     3061 ggctatttga ccgaagcggt tcgccgccat ccatattcgg tagtgttact tgatgaagtg
     3121 gaaaaagctc accctgatgt gtttaacatt ttattgcaag tgttagatga cgggcgttta
     3181 accgacgggc aaggcagaac agtcgatttc cgcaatacgg tagtgattat gacctcaaac
     3241 ttaggctcgc atttaattcg agaaaatgcg tataaaggct atgatgtggt taaagaaatg
     3301 gtgatggaag tcgtcggaca gcacttccgc cctgaattta tcaaccgtat tgatgaaacg
     3361 gtgatgttcc actcacttgg tcaagagcat atccgttcga ttgcgaagat tcagctacaa
     3421 cgcttaatcc aacgcttggc agaacgaggc tatgaggtga cagtaaccga tgcagcatta
     3481 gatcatatcg gcaaggctgg tttcgatccg ctgttcggag caagaccact gaaacgtgcg
     3541 attcaacaag agcttgaaaa tccgcttgct caacagatct taagcggtaa attattaccg
     3601 aataaagccg ttacggtgga ttaccaaaac gggcagattg ttgcaacaca ataatgtctc
     3661 cgatggtgcg agcgtcctcg ctcgtacctt acaagcggtg gatttatcgt aaaaatttgc
     3721 aaaaaattgc tcgaaaataa ccgcttgcac agtaaaaatt ttcatattgc ccttcattaa
     3781 ttttcataag ctaatgaagg gctttttatt actctttttg ctatcattaa cggcgtttat
     3841 aaccaataca attacaagga gtaatttatg agccaattat ttccggaagc aacaatccgc
     3901 actcaagccc cgtatcgtaa tgatattgta ggcagctttc tacgtaccga tgcgttaaaa
     3961 aaagccagag aagatttcaa tcagcaaaaa atcacccgtg acgaattgcg tgaagtcaca
     4021 cgccaagagg tcaaaaaatt agttgagttg caaaagcaac acggtgtaaa agcagtctct
     4081 gacggtgaat ttagccggac ttggtggcat ttagatttct tagctgaact tgatggaatg
     4141 gattggcaag aaaccgaagt ctttaacgtg aactttaccg gtcataaacc caaagggcaa
     4201 acggtaaaaa tcgtgggcga tattgatttc tccgaaagcc acccttttgt ggacgcttat
     4261 cgtcttttaa aagaagctgc cggcgattac ccaaccaaat tcacgattcc ggcaccgaca
     4321 atgttacata ttatctgctg tgtgcgtgcg gaagattacc aaccgttacc acaatatcaa
     4381 gacgaacaaa aactgtacga tgatattgct aatgcttata tcaaagcaat gcacaaattc
     4441 tacgatatgg ggctacgtaa cttacaatta gacgacacca gttggggaca attctgtgcc
     4501 gaagataaac ggaaagagtt tgcagccaga ggatttaatt taactgattt agcggaaaaa
     4561 tatgtcgcat tattaaaccg tattgttgat gcaaaaccgg cggatatgtc aattacgatg
     4621 cacatctgcc gtggtaactt ccgttcttct tggttctcgg aaggcggtta tggaccggtt
     4681 gccgaagtat tattcggtaa atgccgtgtt gacggcttct tcttagaata cgataccgaa
     4741 cgtgcaggca ctttcgagcc actacgccac attaaagatc aacaagtggt actaggctta
     4801 attacctcta aatttggcga tttagaagat aaaaatgtga tcattgagcg tattaaagaa
     4861 gcggctcaaa ttgtgccaat caatcagcta tgcttatcac cacaatgcgg ctttgcctcc
     4921 accgaagaag gcaatatttt aaccgaagcc gcacaatggg cgaaactaaa cttaattaaa
     4981 gaaattgcgg aagaagtttg gggtagctaa tcctctataa tacaaatagc cgagtaaata
     5041 ctcggctatt ttagtttgtt ttaacattac aaccagaaga gatacccaac agtcgcaatc
     5101 acaaagatag agataatatt tagccagaaa ccaactttaa tcatctcact ttgtttaatt
     5161 tgccctgtac caaatacaat cgcattcggt ggggtggcaa ccggcaacat aaaggcgcaa
     5221 gatgctccta gaccaataat taaggctaat ccgaccggtg gcatatttaa tgcttgtgct
     5281 atagagatga aaatcggcac taacaaagcc gcactggctg tgttagaggt aacctcagtt
     5341 aggaaaataa taaatgctgc cacaattaaa ccaattaggt aaaaatgccc cccttcaatt
     5401 agtgagacga ccccatcagc cataattttg ctcgcaccag tttgtcctaa tacagcactt
     5461 aacgtcaaac caccaccaaa taggaataat accccccact cggtgttttc ttgaatctgt
     5521 tgccaatttg cgacacgagt aatgcaaata agtgctgcgg caatcaatgc aagaatggtg
     5581 tcaaagctcg caattttgcc attaattccc agaaatgcag aaataatagg gttaatttta
     5641 tcaccaaaaa tccaaccaag cgcaataaag acgaaaatag ccaaggtgat aatacgagaa
     5701 cgatttaatt caattttctc aaatgatcga tcaaaactaa ctgaaaaatt tggtttaaat
     5761 acgatatata gtgttgcaat cattaatggg aataaaatta gcataattgg caaaccatat
     5821 tttaaccaat cagcaaaagt cagattcaat tgagaagcaa caatcgcatt cggtgggctt
     5881 cccactaaag tacccattcc accaatactg gcactataag caattcctaa taacacgaaa
     5941 agataagtat tatggttttg tttctgatca agtttactta aaatccccat tgccaaaggt
     6001 aacatcattg cagctgtagc tgtattactc atccacattg acaaaaacgc tgttaccgca
     6061 aataaataaa taactgcaat cgataattta cctttagcta atgccataat tttattggca
     6121 atcatacgat ctagctgctg aatgtgtaat gctgtcgcta aggcaaagcc tccaaaaaat
     6181 aagaaaatcg ttggatcagc aaaagcaaca agagcttctt ttgatttaac cagccccagt
     6241 gctacagcca aaatcggaat taataatgcc gtaaccgtaa cgtgtaatgc ttctgttagc
     6301 cataagacgg caatgaaaat taacaatgcc aaccccttat tggcttcagg ggtaaaaggc
     6361 aaggtattta acaaaataat aaataaaata gcatctgcaa caaaaatcaa gctattgcgt
     6421 gtatttttac tcggttcaat aagaggagta ttttccataa aaacctcaca aaatatagat
     6481 aatcagtggt atcactatat ataaaaaaac gatataggca aatataattg ttgcaaaagt
     6541 gtgaagctca tcaaaaaatt taacactaaa aaataaattg cttaaagata cagcaccttt
     6601 gcaaaaataa atcaaaatta caccgcttgt agcgaaaggt attcaatctc taacccaaat
     6661 agtgattttg ccaatgcttg agtcattgca taactactga gagagccttt cgcctcagcc
     6721 agcacaactc gagtaacggg aatatcggca agccctaaaa ataatcgata gttcaacgcg
     6781 ctttgcaacg gtaaaaaagt aggattaaaa gctgcattct cagtatattt accacaaaca
     6841 atacgctcac ctacttgcag tgcaacccca ctaaatgcgt tgctgtaagg ggcataagca
     6901 ttattggcag caaaaattgc cgcttgttgt aaatgatcgc ccttaacctc aaattgttgc
     6961 ggttgttcat caaataagac tttctcaatc cctaaatctt tcggtccaaa actatccggc
     7021 aaatagctat ggagcaaatt attttggcta tgcggtaaat gtacttttaa gcttgccgca
     7081 ctgtttaatt cattcataaa ttggcggcaa tgcccacaag gggtatagtt cacaaccaca
     7141 tctgttatca aagtttcccc tgctaaaaat gcgtgcgaga ttgcactttg ctctgcgtga
     7201 acggattgtt gcatacattc cccggaaaac tcttggtttg ccccaaaata gaaatctccg
     7261 tttttgccaa tcgcaaccgc ccctacatta aaatcggaaa ctggtgtaac cgcataacag
     7321 gcagcaatgg caatgcaata taaagccaac tcaacacgag agcgtttaaa tttttcacag
     7381 agttcatcaa ccacttcgta agagagctgc ccgtgaaaat cttgcttgat aagttgctca
     7441 ataatagctt gtgtaacttc acagtttttc gctgctttta attgttcaaa acgctctgta
     7501 atgtctgttc gaaacatact gtacctccgt ttaatgtttt ttatagctgc aaatcagtat
     7561 ccctgccgta atcagtatgg cactaataat atggtaagta tgaactgatt catttaataa
     7621 aataatactg aacattgctg caaagagcgg cgtaaaatta gtcattaccg ctcctttagc
     7681 agaaccgact attgcaatgc cgaaattcca aaacgcataa gagagaatag aagggccgat
     7741 aaccaaatag cctatcccac tccattgtaa agcggtcaaa tttgctaaat tttttgcaga
     7801 ttctgctaca tattcataga taaaaaatgg cgttaacgtt agaactgcca gccccactaa
     7861 tacggtcaaa aacaccgtat tgcttatacc ttgtggacgt agccgaatca cacaacaata
     7921 aaccgcccag cttatagtag aagcaatcgc ccataaatca ccttgattaa ttgccaagct
     7981 gaataagcga gttagcttcc cttgcatcaa tagccacagc actcccagca aactgattat
     8041 tgccccactt agaataatcg ggctgatttt ctccttaaaa acgagccgat ttaaaaatag
     8101 caccaataca ggcgaaatag ctaaatagag actcgcattc aatgctgttg tcgtttttaa
     8161 accttcatat aaggtagccg ggaataaaat taccccaagc agacctaata cccacatcac
     8221 acctaaacga ggttttaata agtgcattac ccgccaagtt gggcgaaaaa agagcaaaac
     8281 taaaattaaa aaagccggca accaacgcaa ataggttaag gtaataggct gaactgcccc
     8341 acttaacact ttgcctaata caaaattccc accccaaaaa agagtagcaa cgattaaact
     8401 gaaatacccc aatttcagtg atgatgagat cattgatgac ctcgttctac aatcacacct
     8461 acactgcttg cttgggcaac cgctttcggc ttatgcagtt caatccgaat ccaagaaagt
     8521 tgatactctt tttgtaatag ttccgccagt tgataggcaa cagtttcaac taatttgaaa
     8581 ggttgagatt caacaaaatc cagcactttt tgcgatactt ccgcataatt caagcaatat
     8641 tgtacatcat cggtttctgc cgctttggaa aaatcccacg ccatatcaat gttaaaaacc
     8701 aagcgttgct taatcgtatg ctcccaattg taagccccaa tggaagcaaa agcggttagt
     8761 tctcgaataa aaaccttatc actcattttt cgtcctgttt tattttctga atttctgtaa
     8821 aatatagcac aagataaatt taatcaggaa aatttatgaa tttaattccc tatttattga
     8881 tcttaaccgc ctatttgctc ggctcgattt ccagtgcggt cattttttgt aagctggcag
     8941 gcttgcctga cccaagagaa gtcggctcac acaatgccgg tgcaacgaac gtactacgaa
     9001 ttggcggtaa aagtgccgca ttaggtgtgc ttttattcga tattttaaaa ggcacattac
     9061 cggtggcgat ggggatttat tttgaactct ctccctcaca actcggtttc atcgccttag
     9121 cggtttgtct tgggcatatt ttcccgattt tcttccaatt ccgtggcgga aaaggcgttg
     9181 ccaccgcatt tggtgcaatc tccgcattaa gctttattgt tgcaggcggt gctatcggca
     9241 cttggctact ggtgttttta atctccggct attcttcttt aagtgccgtc ttcactgcct
     9301 tggtcgtacc gttttacatt tggtggttcg agccacaatt tactttcccc gtcgccttag
     9361 tttgttgcct attggtttac cgccatcacg ataatattca acgcttatgg cgtgggcagg
     9421 aagacaaact gtgggataaa ttcaagaaaa atagagcata aaaataggca tagtgaaccg
     9481 ttcgctatgc ctatttgcaa attattgcgg aaaaatcacc gcttgtcttc tcgactaaac
     9541 cgctaaatct gcttcatctc ctcgattttg tagccattgt ttacgatctt ccgctcgttt
     9601 tttacccaat agcatatcca taatttcaaa ggtattcaat tcgccctctt ctaccgtgtc
     9661 atcaaaggtt aattgtacta agcggcgagt gcttggctcc atcgtagttt cacgcaactg
     9721 gctcgggttc atttcgccta agcctttaaa gcgttgcaca tttggctttc cttttttctt
     9781 ggcaaggcga gctaaaatcg cctctttttc cgcctcatct aaggcataat gcacctcatc
     9841 tttgccgata tcaatgcgat aaagtggtgg cattgccaca taaacgtgtc cgttttgcac
     9901 caatttcggg aaatgacgaa ggaataacgc acacagcaag gtggcaatat gcaaaccgtc
     9961 tgaatccgca tcggcaagaa tacaaacttt gccataacgc aactcttcta aattatcgct
    10021 atcagggtca attcccaagg ctaccgcaat atcgtgtact tcttgtgaag ccaatacttg
    10081 gtctgatgaa acctcccaag tgtttaaaat cttaccacgc agtggcaaaa tggcttgata
    10141 ctctttatct cgagcttgtt ttgccgaacc gccggcagaa tcaccttcta ccaagaaaag
    10201 ttcggtacgg ctgagatctt gagctgtaca atccgccagt ttgcccggta aagccggacc
    10261 actcaccaat ttcttacgca ccactttttt cgccgcacgc atacggctct gggcggaact
    10321 aattgccatt tcagcaatta atttacctgt ctgcacattt tggttaagcc ataaactaaa
    10381 ggcatctttc aaggtgctat ccacatagct tgaggcttga cgggaagaca aacgctcttt
    10441 ggtctgccct gcaaattgtg gctcttgaat tttcagagaa agcacataag cacaacggtt
    10501 ccacacatca tcagcggtta attttacccc tttcggcaat aaattatgga tttcgcaaaa
    10561 ctccaccatc gcctttaata aaccgttacg caagccatta acgtgcgtgc cgccttgtgc
    10621 ggtcggaatc aggttcacat agctttccgc tactaactcg cccccttccg gcaaccaagt
    10681 taatgcccag cttaccgcct ctgtttcagc agtaacatca ccaataaacg gtggattcgg
    10741 cacggtttca taaccgttta atgcctcgct caaataatca gataagccgt cttcgtaata
    10801 ccaactttct tcggtattgt tgattttatc aataaaattg atggtgagtt tcgggcaaag
    10861 caccgctttg gctcgtaaca aatggcgtaa acgactcacc gaaaaacgag ggctatcaaa
    10921 atattttggg ttcgggtaaa aacgcactgt cgtgccggtc tgttttttcg ggcaagtacc
    10981 aattaccgtc agatcttcca cttttacccc gttggcaaag gcaatcgaat agacttctcc
    11041 gccacgttta atctgaattt caacccgttc ggacagggca tttaccaccg aaatccccac
    11101 cccgtgcaaa ccaccggaaa acgtatagtt tttattggaa aatttaccgc cggcgtgcaa
    11161 tttcgttaag ataagctcca cccctgaaat tttctcggtg gaatgaatat cgaccggcat
    11221 tccccgcccg ttatccacca cttccaacga attatcagca tgaagaatca catcaatttt
    11281 atctgcaaag ccggacaacg cctcatcgac actattatca atcacctcct gccccaaatg
    11341 gtttggacgt gtggtatccg tgtacattcc cgggcgaagc tgcaccggct cgaggtcttt
    11401 cagaacggta atttcatccg ccccatagcg tttttcagac attatgcttt ctcttaggct
    11461 taaaataaaa taaggctgaa ttttaaggaa tattcagcta ttttgcaaaa ttttggtgaa
    11521 aaatgacctg ttgttatgca ataaaaacta tttttgcgat ctacatcgaa aaaatgagtt
    11581 ttaatttccc tatttgctta ttcattcagt atcttaatct cactttttat tttaaaatgg
    11641 tactatatta tggtagtaaa aatcctaaag cggaaatctc aaaagacact acaacaaatc
    11701 tacacccagc ctatttctgc caatattaaa tggacaaata tagaagctct ttttctagag
    11761 ttaggagcag aaatagaaga acgagaaggg agcagaattg cagttgtttt atttcaacag
    11821 gtcagagtat ttcatcgccc acacccgaat cctgatacag ataaggggcg gtagcgagta
    11881 ttaaaaaatg gttatctgaa aacggagtca ttccttatgc gtaatattat ggatattaat
    11941 ggttataaag ctgtcattgc ttacgatccc gaaacagaat tatttcgagg tgaatttatc
    12001 ggattaaatg gtggagccga tttttatgcc gataatgtca ttcaattaaa aaaagaaggt
    12061 gaactaagtt tgaatatctt tttagaactt tgtagagaaa aaggtattga gccgttcaaa
    12121 caatattccg gaaagtttaa tgttcgcctt tcgcctgaat tacataaagc tgcggtaatt
    12181 gcagcaactg ctgaaaattt aagcttaaat gaatggatta accaaacgtt agaaaagagc
    12241 gtgtagccta attgcaaaac aatcacctat tttgaccgct tgtattaccc gtttaaccca
    12301 ttcaatatcg aacactccga attggcgttg ccacagcaag agctactcca gcttttgagc
    12361 aaagtcagca tttggtttaa atcggcaatt ttttgttcaa gctcaccgat atgctgttcg
    12421 gttaattgtt ttacatctcg gcttgagcgg tttgggttgt cgtttaattt aagtagttcg
    12481 ctgatttgag ccagcgaaaa gcccactttt cgggcattgc tgataaaatg taatcggctc
    12541 aaatcagtag cattgtagaa tcgatacccc gcttcggtgc gacttgtcgg cggcagaagt
    12601 cctgcttttt cataatctcg gatttgtttg gcggaaagcc cggttttttc tgcggcttgg
    12661 ctaatattca ttataatcct ctcactttaa tcgcttgacc ttaacctaag gttaagcttt
    12721 attatacgcc tgaataatca ctcaaaacag gagaaaatga tgacaattac cctacaactt
    12781 gatggcttac attgtggcaa ctgtgtgaaa agtgtcgaaa aagcgttaaa tggcgtggct
    12841 ggggtgaacc aagttagcgt aacgttagaa ccgcaaattg ctgtggtgga aggctcagca
    12901 gaagcacaag ccttaattga agcggttgaa gacattggct ttgacgcaaa attagcctaa
    12961 ttaataaggg gcagaaattt tgccctaatc tgcccaatat ttcggaggat aaatgacaag
    13021 cacagctcac tattcgccag aacaacaact tttgattgat ggaatgcact gtgccgcctg
    13081 tgttcggcga gtggaaaaag ccttacttaa agtggaaaag gtggaatttg cctcagtcaa
    13141 tcttgccgat caaaccgctt ttgtgcaagg caacgccaac cctgaagcct tggtagcagc
    13201 ggtagttaaa atcggttttg gggcagaagt gctggaaagc gaggaagaac gccgaattaa
    13261 acaacaagcc caaacgcaac gagtgttagg gcataaacgc actcaattta tgcttgccct
    13321 tgtagttggt tttgccttag ttgcttttgg gttctacaaa ggaatgacgg taaacgaaac
    13381 caatcgttcg ctttggctca gctgggcagg tattagcctt gcgacaatgt atttttcagg
    13441 taaagatttc tttcttgggg cattttcagc actgaaaaac cgctcagcca atatggacat
    13501 gttagtagca atcagcaccg gcacggcttg gctctattct tgttggctca cgcttttccc
    13561 acaaccgaat gctcacgttt attttgaagc cagcgtgatg attctcggct ttatcaatct
    13621 aggaaaatac ttagaactga aagccaaaca gcgttcctcg ctagcattgg aaaaattgct
    13681 ggatctcgcc ccaaaacaag cggtcatttt tgaagaaaat attgcaaaaa ccattccggc
    13741 taaagcaatt aagccacaaa tgcgggtgca agccttaacc ggtgaccgct tggcggttga
    13801 tggtatttta gacagtggct ctatttgggt tgatgaatca atgctcaccg gtgaagccct
    13861 acctgtagag aaaaaaatcg gtgataaagt gcgagccggc actctggtgc aagacggttc
    13921 aggcacttac attgccgaac aggtcggctc acaaaccgct ttggctcgtg taatcaatgc
    13981 cgttcgccac gcccaaagca gcaaaccgcc attggcacag tttgtagata aaatcgccgc
    14041 tgtttttgtg ccggtggtgg tttcaatcgc attactttct gcgttaattt ggctggcagt
    14101 tgggcaggat tttgcctttg cactctcgat ttttactacc gtgttgatca tcgcttgccc
    14161 ttgtgcattg gggctggcaa ttccgctttc taccattgcc ggcgtggcac gttctgccga
    14221 atttggcgtg ctggtgcgaa atattgaggc actacaagca agcagtgaaa tcgacaccct
    14281 agtgttcgat aaaaccggca cactcaccac tggcagaatg gaagtgtcgg atgttctcac
    14341 ctttaacgga tttgagcaaa agcgcttgct acaacttgct aaaagtgtag agcaacacgc
    14401 ctcacacccg attgcgaaag cgattgcaaa atttgccgaa aatcagaccg cttgtggtgt
    14461 aaccgatgtg caagtgttga aagggttagg catttcagca aaatatgaag gcagtacaat
    14521 cagaatggga aattggcaat ttgtaggcga aaccattcaa gcaaatcttg cctccctatt
    14581 gcccgctaaa gagggggatt tttcctcaaa aatttttgtt tcggtggata atcaactcgc
    14641 cggtgtattg tcggtttcag accaacttcg ccctgaagcg aaagcaacca ttcatcaatt
    14701 ccaagcggaa ggctatcaat gcgtgatgct gaccggtgat cgccaacaaa ctgccgacta
    14761 tttcgccaac gcattggggt tagacggcgt gattgcggag gtattaccgg agcaaaaagc
    14821 ggaaaaaatt cgagccttgc aagcagaggg taaaaaagta gcaatgattg gcgacggcat
    14881 aaacgatgct ccagctctgg ctcaagccaa tgtgggcatt gcgatgcaca atggttcaga
    14941 tattgcagtg gaaaccgccg atctttcgct gatgcgagaa gggctagcac cactgatgca
    15001 aattctaccg ttctctaaaa aagtgctgaa aaatatgaag caaagtttgc tcggggcttt
    15061 tatctataat gttattgcga ttcctattgc tgccggcgtg ctttaccctt tcaccggctg
    15121 gctactcaac ccaatgattg ccgccattgc gatgacattg tcgtcaatta ccgtggtgtt
    15181 aaatagtcaa aggttgttga aataatttaa gcggtcaaat ttgcatattt ttttgcaaat
    15241 ttgaccgctt gtaatcacta atccgccaaa aacagcggcc caagaggtgt tttcggaatg
    15301 ccaaaatgct cagggtaatg cacctcgacc aaatatagcc cctcggcttt cgctgtaggg
    15361 gcagcttttt cccggtcacg ttgctccaac acccattttg cccattccac aggctgtctg
    15421 ccttgcccga tttcgagcaa tgttcccaca atattgcgaa ccatatgatg tacaaaggcg
    15481 ttggcttgaa tatcaacaat cacataattg ccttgccgag acacatttaa atgatgaata
    15541 ttccgccacg gcgtattaga ttggcatttg gcggcacgga aagaggaaaa gtcattctcg
    15601 cccagcaaat actgccctgc ttggtgcatt ttgcgttcat caaggggaaa gtgaaagtgg
    15661 gtaacacctt taggtaaaat tgccgaccgc agtttttggt taaaaataat atagcggtaa
    15721 cggcgggcgg tggcactaaa acgggcgtga aaatcctcat tcaccgctac cgcccatttc
    15781 accgcaatat catcgggtaa atgagcgtta gtgccgaaac accagctttg tagcgggcgg
    15841 tttgcttgcg tttcaaaatg cacgacctgc cctgtgccgt gcacaccggc atcggttctg
    15901 ccggcacaaa acacttctac gggcgaattg gcaacaaccg acaacgcctg ctctagctgt
    15961 tgttgtacac tctctaccgc ttcttgtcgt tgccagccaa aataacggct gccgtcatat
    16021 tcaataccta atgcgatttt cattttaata ccttgataaa aagaggggcg aaaaattttt
    16081 cgcccccaca gtaattgata tttgcaatta tttattcaat aagcctaaaa attctttgcg
    16141 ggtttctcgg tcttctaaga aaacaccgcc aaaggcagaa gtaactgtat agctattggt
    16201 gtcttttatg ccacggcatt tcacgcaaaa atgggtggct ttcacataca ccgcaacatc
    16261 gtctgtttct aaaatagttt gaaaggcagt taaaatctgt tcggtaaaac gctcttgcac
    16321 ctgcggacgt tgggcaaaaa actgcacgac acggttgatt ttcgagagtc caatcaccca
    16381 ttttttcggg taataggcta ccgctacttt gccgtcaata gtaacaaaat gatgctcaca
    16441 ggtagaagtt aaagtaatat cgtccaccag caccatttca ctgactttca ttcggttttc
    16501 aatattggta attttcggga aggtagcata atcaagcccg ctgaaaattt catcaacata
    16561 cattttcgcc aaacgatgag gcgtttcttc taagctgtca tcacttaaat ctaaaccgag
    16621 caattctaaa actgcctgca tatgctgctg gatttctgct cggcgactgg ctttatcttt
    16681 ggtatgagta acagtcggag tttcaatgcc ttttgccaac aaggcttggc gaactttttg
    16741 agcctccggc gaaagcgtgt tttctgtgat agttaattcg ggcgagatcg ttgtcattgg
    16801 ttttcctctc aaatgtaagc tgaagattct aacaaattga catcaaaaaa aatagctcta
    16861 aaatgagcta tttcagccat aaacaccctc tttatttatg caaaatatac agtatctctt
    16921 taatgccgac ctgattcccg aacatcaagc tgaatttgtg cagtctctct taacttgcaa
    16981 aaattttgac aattccgacc gcttgctagg cttctcaaaa gggcgaggta cgacttggtt
    17041 tttagatacc tctgctgaac taggtatcaa tgtggtgctt cgccattatt atcgtggcgg
    17101 cttgttcggt aaaatcatca aagatagtta cttttttact cgctttgagg ccacccgagc
    17161 gtataaagaa tttttcttac tgcaacaaat gttagcttgg ggtttacctg tgcctcgccc
    17221 tgtggcgatt aaaatagaaa gacatttttg ttgctatcgt gccgacatta tgctcgaaaa
    17281 gctagaaaac acacaagatt taagcaaaat cttgcaatcc cattctttat cgaacgaaca
    17341 atatgagcag atagggaaac tgattcgcag tctgcataac catcaaattc accattccga
    17401 cttaaatatc cataatattt tgcttggtaa tgatggcaaa ttttgtctga ttgattttga
    17461 taaatgcggc attgagccgg gcgaaaattg gaagcaaaat aacctagacc gcctgttacg
    17521 ctcgtttaag aaagaacaag ggcgattaaa tattttcttc agcgaagaaa attggcaggc
    17581 tgttttgaga ggatatactc tctaagaaac aataatggca caagcttaga aacttgtgcc
    17641 atcaaatcat caatattaac tacttcactt cacgaatcat aatttcagac ggaatcacac
    17701 tgccttgcca gtaaagttca gaagctactt tttccgctaa tgcgaggtag gcttggctga
    17761 tttcgtgttc cggagctgcc accaccgttg gcacaccgct atctaaatct tcacgcagac
    17821 gaatatgtag tggtaattgt gctaacactt tagtgccata tttttgggcg attttttccg
    17881 ctccgccggt gccgaaaatt gcctcatggt gtccgcagtt tgagcagata tgcattgaca
    17941 tattttcaat caccccaagc actggtactg agactttctc aaacattgag atccctttaa
    18001 tcgcatctaa taaggcaata tcttgtgggg ttgttactac caccgcaccg gtcaccggaa
    18061 tttgctgtga aagcgtaagc tgaatatcac ccgtacccgg tggcatatca atgaccaagt
    18121 aatccaattc attccaccaa gtttcattta aaagctgact taacgcactg cttgccatcg
    18181 ggccacgcca aatggtggcg ttatcttctt ccattaaata gccgatagaa ttagattgca
    18241 agccgtgagc ggtaatcggc gtgatgtgct tgttatcagg agaagttgga cgttggtctt
    18301 ttgctcccaa catatgcgga atagatgggc cgtaaatatc cgcatctaaa atccccactc
    18361 ttgtcccttg tgctcgtaag gctaaagcaa gattaactga ggtcgttgat ttccctaccc
    18421 caccttttcc tgaagtgacc gcaatgatat tttttacccc attgactgcc gggtgtttat
    18481 tcgcccgttt taaggtcgca atttggtaat ttaataccca ttttacaccg cttgaacctg
    18541 ttacttgctt taatttagcc tctgtttcgg cttttaaggt ttcaaaacca ctgttccacg
    18601 caaatggcat cgtgatttca attctaagaa tatcgccccc taattctgct tttttaaacg
    18661 cattaagggc aattaaatct ttctgtaaag tcgggtggga aaattgttgc aagattgctt
    18721 taatttcaac aagttgctgt tcatttaatt ggttcattgg ttatccttgt ttgctaaatt
    18781 gcgttttaaa tctttgctat aaattacttc gctatcgtta ttcaaatcaa tacccaaaag
    18841 ggaggaaaca atcccaaccc gatgatggta ttgaaataat ggcaatacgg caacatcgct
    18901 ataaagctgc tcgctaattt cttgaataag tgactctctc gcttctgcac taagcgtttc
    18961 tgtttgtaaa cgatttaatt tttgatcgac tatctcactt ttatagccgg aatgattatc
    19021 cgggctcatt gaatgaaact tctgcaaaaa tacaatcgga tcaggataat ctgcacacca
    19081 gcctgctcgt gctatctggt aatctttttg ttcccttact ttatttaaag tctgccaatc
    19141 aaccatttta ggtgtaatat taaataattc tgattgagaa agggctcgag taacttggtt
    19201 agcaatatta atgctattct catcatataa caaagtcagc tttaaaggat tataagggct
    19261 aattcctgct tttgttaata gctgctcaac cacaacagga ttccaacgct tttctctatc
    19321 ttttactaag ctatgtggaa ttacagactg actcggaacc ccatattctt gcccactatt
    19381 tgctgaagcc accattgtcc ttattgcttc acgaatctct cgtttagcta ataatggatc
    19441 atcaaaattg aactcatagt aataagagca caaacgcgga aatttcacga tattcgtttt
    19501 tttatttaat aaaggattct cgacaatatc aaaagcagag cagttttgga tagttgtaat
    19561 taaatcatac tctatagttt gaaagggaat ttcttgggtt cgagccttta acaccatttt
    19621 ttgagcatct agtttctcga gacggtaaga cgcattgctc acgaagttat ctatggttgg
    19681 agcaatccct tgataagtag gtaataatgc ggaatgtgcc agcatttcag gcaattggtg
    19741 atttgggtga tttagccgaa ttctcaatgt atgcgcattt aatgcctcta caccgagttc
    19801 ttcaactgac tttatttgct cttcaatcgc ttttgcattt tctataccca tatagatgag
    19861 atatttagac aatacagaat gattttgagg atctattaaa cgtcgccagc ttgctacaaa
    19921 atcttgtgca gtcacaggtt ggccattaga ccacacagct ttctcatcta aaataaacaa
    19981 ccactctttt tcatcttcag taaaccaatt ctgagcaatg gccggaacga catcaccttt
    20041 tctgttgtag gccgttaaac cgactaatag atctcttaaa ggagcagcat ctgcagaagc
    20101 tttaatttta tgtgggtcga gttgaaatac agcagaataa attgcacgtt tgagtaaagt
    20161 atcactctgc cggttttcta cccagacaga ttgaatggat tgagggcaaa ttaattgatc
    20221 acaagatgta ataagcagaa tgcaagcggt aacttttgca atttttttta caaatgtaac
    20281 cgcttgtaag gatttcaaca taaactcccc aaaggttaat taagatttat tttacaagaa
    20341 gcacaggaaa taaagttgta attcctgcca caataatttc aattcccagc gccattaaaa
    20401 tcagccccat gatacgagta acgacattag atcctgtttt gcctaatttt ttcaccaaag
    20461 gggctgaata gcggaataaa atataacaaa ttaatgcaaa tacaataatc gcaatgctaa
    20521 agccaacata gtcttcccaa gtatggtagc gggttcccca cacaatggtt gagccaattg
    20581 cccctggtcc tgccataatc ggcattgcta atggcacgac accgatattt tcgtattcag
    20641 taatatcttc atttttctct tctttatttt gtttgtgttc acctaattta ccgctaatca
    20701 tcgtcatcgc aatgcttaca atcaaaatgc caccagctac tctaaaagag ctaagtgaaa
    20761 tgctaaacgc attgagaatc agattaccaa aatagaggct gactaataaa attactccaa
    20821 tagaaacagc ggtgattaag ctggtgcgat ttctttcccc ctcatattgg tgagcggtca
    20881 tactgaaaaa aataggcaag gaaccaaaag gattgactat agcaaataga ccaatgaaga
    20941 attggaggta gatggcaaaa ttaataatga tatccacaaa aactttctca aacaacagtg
    21001 tttcgggcgc tattatatcg gttaatcaag gtagatacaa accaaaagca cccagcctaa
    21061 aggacggttg ggtgcttttt gataaaatga aaggcttgtt agtgtgacga acgttgctgc
    21121 ataaaatctt catttacctc aattgaagct tttgcacgta gcgattgtaa gaattcatta
    21181 cgtaaaatta aacgattagc ttgttcaaat tgtggcgcca atgtcttaaa ctgttcagca
    21241 ttcccttccg taatgttatc taaggcaaca ataactacat cgcccttttg attacgtgcc
    21301 atttgataag tcgttttatc ttgcgccttt ttcattgcga aaatcgttcc agccaatacc
    21361 gggttttcta cttctgcttg catataaact aaagtttgtg gcgcattaaa tttcacgtcc
    21421 actgatttcc cttcattcaa ggcttttaca ttttcttcta ctttcgccag caacgctttt
    21481 tccgcttttt ctgccttcac aaaattttca actgctgctt ttgcttcatc aaaagtttgt
    21541 ggacgttctg catcataatc actcactctc acaaacaatg tctgtggatt tgcatcattc
    21601 ccaacatcta aagcatcaga attttgttta ttttggcgta gctctccttc aaacaaaact
    21661 tttaatactt tctcattttg taaagcagta ggtacgtttt cacgggtaaa cagatccgtt
    21721 ttttgcagtt ccacattacc ggctttcgca acttcttcaa gtgaagaatt attctcaaag
    21781 gctttatttg ccatttcgcg cgcaactgta aaatactcag ttaacactaa ttcttggcga
    21841 atagtttggg caattttatc tttcacttgt gctaactcaa tcacttgctc aggtttacgc
    21901 tccaatactt tgatgatatg gtaagcatta tccactttca ccgctgcact catctggccg
    21961 gcagttaaat ttgctacagc atcttcaaaa gctttcggga aagtgccagc ttttgcccaa
    22021 cctagatcac caccattatt tgctgataaa gtatcgctag atttgttttt tgccaaagta
    22081 gcaaaatctt ccccattttt gagcgcttgc tcaatagcct gtgcttccgc ttcactagcg
    22141 acttgaatat gagctaaatg ggcttcacct ttagttacat aatcggcttt attgcgatca
    22201 tagtaagttt gaatttgctc attggtaatc tcaactttgc tttccacatc ttttggagaa
    22261 agagtaacgt actcaaccgc taatttttca ggtgctaata atttagtttt atttgcttcg
    22321 taataggctc gcaattcttg ctcggaagcg gtctgatttt ccatttcttt tgcaactgaa
    22381 aattcggcta aacgcacttc acgttgttgc aacagtaatt ttgctaacaa tgcctgctgt
    22441 gccggtacat taaaatcact attgataatc ccctcttgta gctgggattg caacatacct
    22501 tcctgcacaa tcgctgcata gccatcggca cttaaattat tgtggcgtaa tgtttgttgg
    22561 tataactcgt tactgaattt accatcttgt tgaaacatct ggctgtttac aatttcagat
    22621 ttgatttgat cagcactaat acctagtttt aactcttttg catactggcg cagaagctct
    22681 tcatcaatta atccatttaa taccgattga ttaaattgag cagcatactc cgggctatcc
    22741 attaaatccc aaaagcgact ccccagttca gcatttaatc tattttgctc acgattaagc
    22801 gtgttattaa ataattgctg actaatttct tccccattta ctttcgctac agaattatct
    22861 tgtgaaatca atcctgtccc aattccaccg attacaaatg aaatagagac taatgcaaaa
    22921 ataattttaa agaccggccc atttgtccgc tcgtgcattt tttcaatcat ttaaaaattc
    22981 ctaaattact caaaaattgt cgctgattat actctttctc aaatgagaaa taaacttgca
    23041 aatttttatt gaaatttaac cgctttctct ttaaaattca cagtccctgt cgtagctgag
    23101 ttagagatcg gctattgatg tattatcaac ccttaacaaa aggaaattaa aatgtctcta
    23161 agcgtagaag caaaagcaaa aatcgttgct gaatttggtc gtgatgcaaa agacactggt
    23221 tcttctgaag ttcaaattgc attattaact gcacaaatca accacttaca agcacacttt
    23281 gctgagcata aaaaagatca ccacggtcgt cgtggtttat tacgtatggt ttcacgccgt
    23341 cgtaaattat tagactactt aaaacgtact gatcttgcta aatattcgga aactatcgca
    23401 cgtttaggtt tacgtcgcta atttcaaata ttagatatga gagccgagct gaaaagttcg
    23461 gcttttttat aaattttatt cgaggaaaaa atatggcttt tgcgtcatta tttacattat
    23521 tagacgatat tgctgccgtg cttgatgatg tatcgatcat gactaaagtg gctgctaaga
    23581 aaacagcagg cgtaatcggt gatgatcttg ccttaaatgc taatcaagtc agtggaaaga
    23641 atgtggtgcc agaacgagaa ctaccgattg tttgggctgt agcgaaaggc tcattaatca
    23701 ataaagtgat cttgattcca ctagcgttgc tgctatcggt ctttttaccg caggctatta
    23761 tcccgctatt aatgataggc ggtgcatatt tatgttttga aggcgtagag aaattactcc
    23821 atcgtctatt acataaaaac aatcaagctc attctgatga aaccgaaacc ctttctgaaa
    23881 aagataaaat taaaggtgca attcgcaccg attttattct atcagcagag attatcatta
    23941 ttgcgttagg tgttttgcaa gactcttcaa ccctaaccca aattttatct ctctccgcta
    24001 tcggggtcgg aattaccctg tttgtttatg gcttagttgg attaattgta aaactagatg
    24061 atatcggttt atggttaatg cagaaaaaaa gcacattctc acaagcggtt ggaaaaggct
    24121 tattatttgc aatgccgtgg tttatgaaag gactttctgt gattggtact attgcgatgt
    24181 tcttagtcgg tggtggtatt tttacccata atttaccaat gattcatcac ttcgtagaac
    24241 aattcggtat ctctccccat ttttctactc tggttgattt tgcagtgggt attgtggttg
    24301 gtattattgc atgcttaatt attttacctt tgatgaaatt attttctaaa aaggcgcact
    24361 aatccccaaa agcgtagctt tggttaaagc tagcttttta tctcttgcta taaaaaaata
    24421 gcaggtttca agcctgctat ttttttaatt attataatga gttagactca gtggctgttt
    24481 gcggtaaggc taatggctca ttaactttag actgagtagc catattcacc tgtttgagat
    24541 tttcctcacg aatacggttt gccattaatg tatcccccat ctgctctgcc acgtgcagtg
    24601 ccataatacg atcatcagca acacattcat catgagccaa taacaattca aactgagact
    24661 tcgctttttg gtattgccca tctcgtgtat aaatatagcc aagcgctcta gcataatcat
    24721 cggtatattt aacattcgct ttatctgccc gttttgctaa tacttttagt agcttactgt
    24781 cagaatcaat ttgtaaacgg gttaattgca caaataaacc ttgtaattgc tcatcttcaa
    24841 atttcttcaa cgtttctaaa gcaatttctt gtgcagattg atgatcgtca ctatcaatta
    24901 aacgcttgat gacaccgaca cgactataca ccgatttacg acgacgattt ggttggtttt
    24961 cccaccaaga aagcaagcct tcctgccctt cttcctgtaa acgctcatct tgtaaaccat
    25021 catcaacgaa atactctaac tcagcatact cttctgcagt taagaaatta cgttggccga
    25081 tttcaactaa taatctatct aacgcaacat aagctctgga ttctttataa atttgaatcg
    25141 ctaagcgtaa tacctcatcg ctatgaggtg caagctctag taggctatca atcgcagttc
    25201 gggcagccgg taattttcct tgttgtaata aaattcgggt tcgtaccaac tccactgcaa
    25261 cattattcgg tccagctatt tcagttgcct taattaaata tttatttgca gctaaatcat
    25321 caccattttg ctgagcagct tccgccgctt taattaaatt cagtacaggc tcatctgcat
    25381 gttttgcatt tttactaaag agtttttccg cttttgagta attcccttca ctcatacgca
    25441 ttaaaccttc cagtgtttct tgctgagctt ttttatgctt acgagttgag aaccagttat
    25501 aagctccatt actcatacgg catattttag tgacaatcca ttcaagtaaa taaactaccg
    25561 ccattgccaa cacaaaaaaa accacaagca ttacaatgct catttcaatc acggtagttg
    25621 ctgtttcaat tctgacataa ccttgatttc cggctaaata aggcccagag attagtccaa
    25681 ctaataataa aagcatcaaa aagagcgttc taaacataat ctattctcct ttttattatt
    25741 gtgctgaaag aggcatcgca tcttgctctg cttttacagg ctctgcttgc tctaattctt
    25801 tttcagcttt tatttcgact ttctctattt tttcaggggt tttattaagt tgctgagcaa
    25861 tcacctttaa gctttgtaat gaagttggag catccacata aatagtttgt tctgccaact
    25921 catctagctc tttcaagaaa tgttgcacat tttcatttga agtttcaaaa taacttctta
    25981 cccaagagcc taccgtttgt aacgattttt tataaagttc gctttgctgg cgaggaacag
    26041 ctaaaatcgc aatttgtaaa cgcaagcgaa tgttttcacg caaataaatt tcttgattcg
    26101 gtgcaacaaa ggctttctca tctgctgcat tacgtttcga tacacgaata aaatgatcta
    26161 aaaatgaagc agcacttttt tctaaatttt tctcccaatc cgcaagagaa tcacttactt
    26221 gcccatcttg tttgctattt gaagcttgtt cactttccaa aatcggcaaa tcatctaatt
    26281 tattcgctaa atttgcgaca cgctgcatta aggcattttg atcgatctga tgcaatgcgg
    26341 ttaatgtatt taaatcagtt ttgattgcct cacgaatgtg aatcgtattc ggtgcttttg
    26401 ataaaacttg atctgcctct aacaataaat ttttcgctgt ttcaatgtca ttatctaaca
    26461 ccactttacg agccgcatta ttcaatagga aatctgcctc agataatagc cagaatgtgt
    26521 tatccgaacc agaggtatta tttagctttt gcagttgaag ctgcaaacta ctaatttgct
    26581 gggtataacc attttgggct gtttctaaag ctttaatccg ttctaaagct ttttgatatt
    26641 ccgtgaccaa ttcggcaatt tgtgcttttt cattttcgaa atttggcatc tcaaccatag
    26701 tttgagtagt aggctgattt gctttagcag atactgcctg aatttgagat tcaacctctg
    26761 caaacttttt atttgccata taatgaccag ctccgccaac cgctaaagcc actaatagtg
    26821 caactaatgc caagcccttt ccgcccgatt tttgaacaac cacttgttct tttggcgctt
    26881 tttgcatttc tgtttgaata tctttctcta tagcttcgtt cactacatct tcctcaatct
    26941 ctttttttgc aaaagatccc gctgaatcga ccgcttgttg tgcctcttct accacctttt
    27001 cagctgaatg ctctaaatgt tcagttactt ttttagatct tgacatactc gccacctcta
    27061 gttagatttg cccactttaa ataataatgt attcatcaaa gttacattat cggctttatc
    27121 cgatacccta atcttatctt cttgccagcc catttgttta gctatctttg caatccgccg
    27181 gctcactaca accagatcac attcaaataa ccatgctcta caatctgctt tcgcttgttc
    27241 ataaagtgat cttaaaattt cactactggt gatcacaata gtatctactc ccaagcgttt
    27301 acataagctg attttttcgg gaatatcatc ggtaaccggc tctctacgat aacactccaa
    27361 atattgaata gttgccccac gcaagactgc agtttcagca agtagctcac gcccagaatc
    27421 ggctcttaga attaaaatag ttttatcagt tagattctgc atttcaggta atgccaaaac
    27481 cccctcgcta ttttcaaatt ctatcggata aatgaccgct tgttcagctt tttctgttaa
    27541 atatttcgca gtccgttgcc ctaccgcaaa atatttcaaa tctgaacgaa aatggaaccc
    27601 ggtatctact aatgtttttg cagcatagtc cactgcattc ggcgaaacaa caaatacata
    27661 atcgtctgat tttagccgag aaatagccga aggaagcaaa ggtaattctt taccggcttc
    27721 aatcgtaaat agcggttgat gaatagcaaa aatttgctgt tcattcaaca tatctaccaa
    27781 ttcttgcccc cgactatcca ggcgtgtgac caacacattc attattgtac gttttcgtta
    27841 taaaccgcag ctaaaatttt atctgcacct tgagcaagca actgttccgc caccaaaatg
    27901 cctaattgct ccgcctcttg cttatgtcct tttgccgaag cccgaataat ttgtgagcca
    27961 tctaacgatc caactaacgc attaagcgtt aattcatcgc cctctaatgt agcataacca
    28021 ccaatcggca cttggcaacc gccttgcaaa cgggtattca ttgcacgttc tgccatcacg
    28081 caacaagcgg tcgaactatg gtttaatttt gcaatgtagt tcaaaatccg ttcatcattg
    28141 gctcgagtct caatccctac tgctccttga ccagctgcgg gtaatgattg ttccacagaa
    28201 atatagctac ggattcgctc ttgcaagcct aaacgaatta agccggcaga ggctaaaata
    28261 atcgcatcat actcgccatt atctaatttg cttaagcgag tgccgacatt gcctcgcaat
    28321 gatttaacct ctaaatgcgg atatttcgcc attaattggc actgacggcg taagctcgat
    28381 gtaccgacca cagcaccttt cggcaaatct tctaacgaat ggtagttgtt cgacacaaac
    28441 gcatcacggg gatcttcacg ttcacaaatc accgcaagcc ccaagccttc gggaaagctc
    28501 atcggcacat ctttcattga atgcaccgca atatcagctc gattttctaa aagggctaat
    28561 tctaactctt tcacaaacaa gccttttccg ccaattttgg ctaatggggt gtctaaaata
    28621 atatcgcctt tcgttaccat cgtaaccagt tcgacagata attgcggaaa atgtttttct
    28681 aattcgcttt ttacaaaatt tgcctgccat aaggctaacg ggctttgacg ggttgcaatg
    28741 cgtaaaatat ctttcataaa ttctaaaatt aaaacattga gttaatgaat tatcctacca
    28801 ctttttagct gaactgccaa aaataatcgt ggatttcgct ttgcatttaa
//
LOCUS       DANLTI010000014        28045 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.014, whole genome shotgun sequence.
ACCESSION   DANLTI010000014 DANLTI010000000
VERSION     DANLTI010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28045
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.014"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            1..971
                     /locus_tag="PXB09_000520"
                     /pseudo
     CDS             1..971
                     /locus_tag="PXB09_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009500034.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(1019..1534)
                     /locus_tag="PXB09_000521"
     CDS             complement(1019..1534)
                     /locus_tag="PXB09_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HDL5232669.1"
                     /translation="MQKKSLISRLLKNIFLYGSLFIIISLVVDWYRSPSAPAQFEQTV
                     HYDIQHQPKVIAQLSHEKPMLLYFWGSWCHYCQVVSPNIQQLANDGTEVLGVALKSGD
                     ENDVQAYLNENGYTFATLNDPSGDFSRGWNIQATPTILIIKDGKIAHHTTGYTSYLSL
                     KFRLWLADVLY"
     gene            complement(1600..2229)
                     /locus_tag="PXB09_000522"
     CDS             complement(1600..2229)
                     /locus_tag="PXB09_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5232670.1"
                     /translation="MALDFNSVGLDSVEAKGGYGIGLQIGQQLLGSGMDVNAETVARG
                     IYDVLNNNEPAIDINEVTAALQELGQRAEAAQAEAFKAIDAENKAFLEENKKANGVIV
                     TDSGLQYEILTEGTGEKPTATSTVRVHYTGSLIDGTVFDSSVKRGQPAEFPVNGVIRG
                     WTEALQLMPVGSKWRLTIPQELAYGERGAEASIPPFATLVFEVELLDIL"
     gene            complement(2377..3006)
                     /locus_tag="PXB09_000523"
     CDS             complement(2377..3006)
                     /locus_tag="PXB09_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDL5232671.1"
                     /translation="MAVSATSFAQTTQPTAAEQMNAVKASVAEKATVAKEATKEKAAE
                     LKAGSAEKMAIAKAKTESFKDSAKNKMDAVKATTAEKTDVIKAKAASASDTMKVKAQE
                     AKAATAEKAATAHETLNSAKTATAEKAASMKAAATEKMSAVKKSQKVNINTANEEQLQ
                     SLTGIGEAKAKAIVEYRKKHGKIKNAAELANIPGIGDATIEKVAPYLTF"
     gene            complement(3180..3743)
                     /locus_tag="PXB09_000524"
     CDS             complement(3180..3743)
                     /locus_tag="PXB09_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5358 domain-containing protein"
                     /protein_id="HDL5232672.1"
                     /translation="MLRKIVLLSTGLLLAACSSNEPQQPEAFPGEFANADYVLSEENA
                     QKWVIASEQAKQCIYPNLTRIQQEHFSKEDSYIFSQYVFFYPLEEIIGEQYVKIIQND
                     EKSMGYAQYLFKKLKNNEAVEALPKKQCATLRTNAKNDLAVVKGQYQSGMIEETNSQE
                     GKSGDKVATNDNKFFFDIIKWGSMLLL"
     gene            3893..6490
                     /gene="mutS"
                     /locus_tag="PXB09_000525"
     CDS             3893..6490
                     /gene="mutS"
                     /locus_tag="PXB09_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDL5232673.1"
                     /translation="MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKR
                     AAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKG
                     PVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS
                     KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQ
                     TLAGFGVEKAVVALCAAGCVLHYAQETQRTALPHINAIHLAQHSDTILLDAATRRNLE
                     LTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKAITALIQYER
                     MSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQL
                     LAQLADFSPLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLE
                     IRERESTGIDSLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTY
                     EDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAERADSLGY
                     VCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMR
                     QIALITLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ
                     ATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTGLPNQLKG
                     VANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEI
                     SHQTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDE
                     LYRLKKLLG"
     gene            complement(6538..7992)
                     /locus_tag="PXB09_000526"
     CDS             complement(6538..7992)
                     /locus_tag="PXB09_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5232674.1"
                     /translation="MKKIVSTLLILTSNLAFAETTPAQLQEKMDNQRMQKNLHTLEKP
                     EPQAKPQAVNAQAHRQSISISSQQLLQQPELLNSAMLTALVTNHTENVQFLLPIYQQL
                     PASKQNSEVVQWAEAVNAKAKQNYSEAIKGYRQLLAKYPENQPIRMQLAVALFENREN
                     EAAEAQFYKLQADKLPQEIANAVNSYLEAIGKQDQWSFQGGLTYLNDPNINNAPNAGT
                     TYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRE
                     SLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSA
                     ISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRR
                     GVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKG
                     ITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF"
     gene            complement(8216..8854)
                     /locus_tag="PXB09_000527"
     CDS             complement(8216..8854)
                     /locus_tag="PXB09_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDL5232675.1"
                     /translation="MRYTTEQIIEKLRQLKVVPVIALDKAEDILPLAKTLSENGLPVV
                     EITFRSEAAEEAIKLVQANYPEVLIAAGTVLTKEQVLTAKNAGADCIVTPGFNPTIVK
                     YCQVLGLPVTPGVNNPMAIEAALELGIQAVKFFPAEASGGVKMIKALLGPYGNLQIMP
                     TGGISPQNINDYLAIPNVVACGGSWFVEKSLIKEQKWEEIGKLTKEVVELVK"
     gene            complement(8942..9889)
                     /locus_tag="PXB09_000528"
     CDS             complement(8942..9889)
                     /locus_tag="PXB09_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDL5232676.1"
                     /translation="MKKLAILGECMIELNGEPFGEMHQTYGGDSLNTATYLARVSSPE
                     QIEVRYISALGTDKLSQGMLAAWQVDNINTDFVLRDEHRQPGLYLIQLDKQGERTFLY
                     WRNQSAARYLLQHPGYPKALSALNEVDMVYLSGISLAILPENDRTLLIAQLRELKTQG
                     VKIAFDSNYRPKLWESVAAAQAHYAELLQLVDLALVTFDDEQLLWGDVNEQATFDRLT
                     QYGIQTIVVKQGSLGATVLQNGERTFVPTVAVEKVVDTTSAGDSFNAGFLNGYLLGKD
                     VVTCCQQGNAVAGIVIQHKGAIIAKSATTHLKSQFEQSI"
     gene            complement(9906..10751)
                     /locus_tag="PXB09_000529"
     CDS             complement(9906..10751)
                     /locus_tag="PXB09_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5232677.1"
                     /translation="MSIAQNHNFKDKVVVITGAGGVLCAYFAKEIAKTGAKVALLDIN
                     LEAAQNFASEIADEGYIAKAYQTNVLELESIKQARDEILKDFGTCDILINGAGGNNPK
                     ATTDNEFHDINLPENTKSFFELDKAGIEFVFNLNYLGTLLPTQVFAKDMLGKEGANII
                     NISSMNAFTPLTKIPAYSGAKSAISNFTQWLAVYFSKVGIRCNAIAPGFLVSNQNKAL
                     LFNADGTPTARANKILTNTPMGRFGQADELVGAILFLMDHHYSSFINGVVLPVDGGFS
                     AYSGV"
     gene            complement(10763..12034)
                     /locus_tag="PXB09_000530"
     CDS             complement(10763..12034)
                     /locus_tag="PXB09_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HDL5232678.1"
                     /translation="MLWLFLGSLFLFLFLGVPVALSMLLSASFMLWKMDMFDAQLITE
                     NFVMGTNNFPLMAIPFFMLTGEIMKHGGISERIINFAMSMVGHIKGGLGYVVIISGLI
                     FAGLSGSAVADTAALGAILIPMMVARKYDVARSTGLICAAGIISVVIPPSIPMIVYGI
                     TAGASITKLFMGGMVPGFLMVLGLWLVWKFLYRNEEQTVEPKKTGKERWAAFKSAFLP
                     LLLPIIIIVGLRGGIFTPTEAGVVAAIYAAIISIILKGLTLDKIQDVFLGTIKTTAMV
                     MFVAAAAMISAFAVTVAQIPMELVEFIKGITDSPTVLMFVIMIFLLLVGCVMDLIPAV
                     LIFVPVLLPLLRAYNIDIAYFGIMMVINLSIGLITPPVGTVLYVGSGIAKIGIARLTK
                     GIYPFLLVYAAILFLLILFPEIIIVPMNWLS"
     gene            complement(12037..12516)
                     /locus_tag="PXB09_000531"
     CDS             complement(12037..12516)
                     /locus_tag="PXB09_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5232679.1"
                     /translation="MQISTALDRTLKLLAIIALSTMIILVFFNAVLRYFFDSGIAWSE
                     EFARICFVYMIFLGIILVAKERGHLTVDIVVSALPAKVQMYLLFFADILVLVALSFIT
                     YGAYQLMLLTYTQKMPATEISSAFLYFAAVISSISYFAIVFTNLWKHIRLAFIKEEK"
     gene            complement(12577..13560)
                     /locus_tag="PXB09_000532"
     CDS             complement(12577..13560)
                     /locus_tag="PXB09_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5232680.1"
                     /translation="MKLKTFTKALLISSLMFTGSAFAKTIIKIGHYNSDVHPSNIALQ
                     EYFKKTIEEKTEGRYEIRIFPNNQLGGEDQIVNGLRNGTIEGGITGLLLQNVDPIFGV
                     WEWPYLFKDNAEAKKVLESPIAQEIGEKMEKYGIKLLAYGMNGFRVISSNKKVENFDG
                     FKGLRLRVPLNSLFVDWAKAMHINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLY
                     EVQKYIIESNHIFSPGLLQLSLKTWNKMSKEDQTIFLEAAKLYQEKEWELAMKMEQDV
                     KDFFHKNGKEVIVPSEQFKADMLKASETLYQNFYQKYDWAKDVISKIHAAK"
     gene            complement(13589..14614)
                     /locus_tag="PXB09_000533"
     CDS             complement(13589..14614)
                     /locus_tag="PXB09_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL5232681.1"
                     /translation="MEKPLKSVCLVEPNKVGIQTVSYPVKGENDVLIKVEGMGICGSD
                     IGAFRGTNPLVTYPRILGHEIVGTVIESGKGMPNNINVGDRVIIEPYIYCGHCYPCSI
                     GRTNCCESLKVLGVHIDGAMQEVVRHPAHMIIKTPDMPIHELALAEPLTISLHAIHRT
                     KVKAGEHVAIIGAGAIGLMAALVAKAYGATPILIDILDKRLDYAKSIGIPHTINPTKE
                     NDLEAIKSITNGRMAEVVIEASGANVAVQNTLKYTSFAGRIALTGWPKTETPLPTNLI
                     TFKELNIYGARTSKGAFEEALELLASRRIEPKDIISKVITFDEIPHYIEELSANPDDY
                     LKIIAVF"
     gene            14778..15539
                     /locus_tag="PXB09_000534"
     CDS             14778..15539
                     /locus_tag="PXB09_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HDL5232682.1"
                     /translation="MQNSSRTYTKIGKILKEEIAQGKYRVGDKLPTERDISERFEVSR
                     TIVREAIVMLEVEKLIEVKKGSGVYVIRVPELFPEDFPEEKDNELRDVGPFELLQARQ
                     LLESSIAEFAAQQATKQDIQVLRNILESEKKLLLEKMDDYSADKEFHLALAHMTGNDV
                     LIQLQEQLWRYRFNSAMWAQLHSRILQHDHHHLWIEDHERILNAIQRKNPALARKAMW
                     QHLENVKTKLLELSDVEDPKFDGYLFNVNPVVVGI"
     gene            15569..16753
                     /gene="uxuA"
                     /locus_tag="PXB09_000535"
     CDS             15569..16753
                     /gene="uxuA"
                     /locus_tag="PXB09_000535"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDL5232683.1"
                     /translation="MEQAWRWYGPNDPVSLDDVRQAGATGIVTALHHIPNGQVWSVEE
                     INKRKALLAEKGLVWSVVESVPVHEEIKTQTGNYQQWIDNYKQTLRNLASCGIDTVCY
                     NFMPVLDWTRTDLEYEMPDGSKALRFDQVAFAAFELYILKRPGAEATYSSAEQAEAKA
                     YFEQMSDADIAKLTKNIIAGLPGSEEGYTLEEFQAQLDRYQGLSAEKFRTHLAYFLNE
                     IVPVAQEVGIRMAIHPDDPPRPILGLPRIVSTIEDMQWFVETQPLAANGFTFCTGSYG
                     VLAENDLVKMAEQFADRIYFAHLRATQREENPQSFHEADHLAGDVDMFGVVKALLTEE
                     YRRKANGDHRLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAEFRGLELALKKVYF
                     ND"
     gene            16804..17673
                     /locus_tag="PXB09_000536"
     CDS             16804..17673
                     /locus_tag="PXB09_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5232684.1"
                     /translation="MFKKYFGEIILFLVTFIAAAGWFFSKHALVGLPPIGFMGGRFIL
                     ASLILLPFSYRELYRLDKVQVKYSVITGLTYGIYTIFWVLGLAFSTVFGEGAFLVSLA
                     MLIAPLLSWLIFKHTPPKIFWLALPIALSGLYFLSAEKGIFHFSLGSTIFLVSSVFGA
                     LYFVLNNQYAKQVSLFPLITIQLAIVGAVCSLYSYFMESWHFPILTEVWLWFAASVLI
                     ATNLRFLMQTLGQKYCHIGTSALIMLLEPVWTLLLSVMLLGEQLSATKWLGCSLILIA
                     LIIYRLPILRLKK"
     gene            17841..18155
                     /gene="rsfS"
                     /locus_tag="PXB09_000537"
     CDS             17841..18155
                     /gene="rsfS"
                     /locus_tag="PXB09_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDL5232685.1"
                     /translation="MEQNLVEFLTKTLDDLKAQDILAIDVKGKSSITDTMILATGTSS
                     RHVASTAERLITEAKQAGFEVFGDEGKAVADWIVVDFGKAMVHLLQSDSREMYQLEKL
                     WA"
     gene            18232..18699
                     /gene="rlmH"
                     /locus_tag="PXB09_000538"
     CDS             18232..18699
                     /gene="rlmH"
                     /locus_tag="PXB09_000538"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDL5232686.1"
                     /translation="MKIQLIAVGTKMPAWVTTGFEEYQRRFPKEMPFELVEIPAGKRG
                     KNADTKRILELEGKAMLAAAGKAKIVTLDIPGKAWTTEQLATQLEGWKNDGRDVALLI
                     GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSVTINHPYHRE"
     gene            18723..20672
                     /gene="mrdA"
                     /locus_tag="PXB09_000539"
     CDS             18723..20672
                     /gene="mrdA"
                     /locus_tag="PXB09_000539"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDL5232687.1"
                     /translation="MFGKLAKFTASNQREKVRDGQAESNLYARRALVAFLGVLALSGV
                     LLTNLYHLQVVNYEDYQTRSNGNRIKLLPVPPARGLIYDRNGKVLAENLTYFGLFIVP
                     EKTENIEQTLTELKDIVGLTDEDIENYHKEKKRSSRYTPIMLKGNLNEAQMARFAVNQ
                     YRFPSLDVQAYYKRNYPYGELLTHIIGYVAKINENDKKKLQEAGKFGNYAGSHDMGKL
                     GIEKFYEDQLHGVTGFEEVEINNRGKVIRKLRDQAGVAGSSIRLSIDVELQQYVMSLI
                     AKHKGAVVVLDPRDSSILAMVSNPSYDNNLFVGGISGQDYKALLDDPTRPLYSRTTQG
                     TYPPASTIKPFMAVAGLEEGMITPSTTISDPGYWILPGTTQRYRDWKRSGHGATNVNK
                     AITESSDTFFYQLAYKMGIDKMSDWMKKFGFGVKTGIDIFEESAGVMPTREWKQKRYK
                     KPWVQGDTIPVGIGQGYWISTPLQLAKATAVLINNGRVNTPHLMLEVQSSNSVTPYQD
                     PLLYEDIKGVPDVYWNLAKQGMYNVNHAANGTARKVFAGAFYHSAGKTGTAQVFNLNG
                     KNYDKNAIKKELHDHAWFIGYAPYEQPKIVVALILENAGGGGSAAAPVARQIMDYALR
                     KGIGEQPDSQNSEQNKPLVTEEHHE"
     gene            20665..21792
                     /gene="rodA"
                     /locus_tag="PXB09_000540"
     CDS             20665..21792
                     /gene="rodA"
                     /locus_tag="PXB09_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDL5232688.1"
                     /translation="MNSGFKKLFWKIFSLDLLLLSGLLAITGYGLLVLYSASGANERM
                     FTSRLIQVSLGLGLMLIMAMVPPRFYQKVSPYLYIFCLILLILVDLVGETSKGAQRWL
                     NLGFVRFQPSEIAKLAVPLMVATYLGKRPLPPSFKDTFIALAIIIVPTLLVAIQPDLG
                     TSILVCSAGIFVLFLAGLSWKLIGAGVVFLAGFIPIMWFFLMHDYQKTRVMTLIDPNK
                     DPLGAGYHIIQSKIAIGSGGINGKGWMEGTQSQLEFLPEPHTDFIFAVLSEEHGMIGV
                     LILLAIYLFIIARGLVIGTKSDSAFGRILSGGTALLFFVYVFVNIGMVSGILPVVGVP
                     LPLFSYGGTSYVTLMAAFGLMMSTYVHRKRVGSNNPYDKLK"
     gene            21884..22543
                     /locus_tag="PXB09_000541"
     CDS             21884..22543
                     /locus_tag="PXB09_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDL5232689.1"
                     /translation="MRLGKIVTLLLAGFLTFSSLNSLAATKNTKAKSSILAKKQATSK
                     AIKKVGISKVKKKEVVAKATKKKTISTVTTKPIKSTKKLARKVVKKTVTAKKKLVKKQ
                     HKPLVKKHFQTGVASYYANYFNGRRTANGETFNNAKMTAAHRTLPFGTLIEVTNLRNG
                     RSVVVRVNDRGPYAHARVLDLSSAAAKKIGMHHSGTARVKIAIVDKSKLGSTNQFYVM
                     N"
     gene            22557..23735
                     /locus_tag="PXB09_000542"
     CDS             22557..23735
                     /locus_tag="PXB09_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDL5232690.1"
                     /translation="MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMD
                     YNSGEVLVSLNPDQRQYPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPG
                     SSLMFLDLNSKVSVGELMKGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLK
                     NTHFTTVHGLDDPEQYSSARDMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNG
                     LLWDKTIQVDGMKTGHTDKAGYNLVASAINPNTRLISVVMGVPTYKGREVESKKLLQW
                     GFANFETIKSIPAAQSVAEQSVYYGEVNKVQLGSVQDSFVTIPKGRSADLKARYELEK
                     KNLEAPLAKGQVVGKMIYQLDGKDVASTNLQVLQDVPEAGIFGKAWDWIALTVKSLFD
                     "
     gene            23903..24202
                     /locus_tag="PXB09_000543"
     CDS             23903..24202
                     /locus_tag="PXB09_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDL5232691.1"
                     /translation="MSQPKAINLQDLPQAKLKDLLEFPCHFTFKVVGANREDLVDDVV
                     VVTQKYAKGDYNPRQQKSSKGTYNSVSIDIVAENIEQVETLYTELAKINGVRMVL"
     gene            24264..24917
                     /gene="lipB"
                     /locus_tag="PXB09_000544"
     CDS             24264..24917
                     /gene="lipB"
                     /locus_tag="PXB09_000544"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDL5232692.1"
                     /translation="MKLIIRQLGIQPYEEIWHQMQSFTDSRDGNTDDEIWLVQHPAVF
                     TQGSAGKPEHLLNPTNIPVVQSDRGGQITYHGEGQQIMYVLIDIKRLKSLGKEVSVRD
                     LVTALEQTVVQTLAEYGIESYPKADAPGVYVDGKKICSLGLRIRKGCSFHGLALNINM
                     DLTPFQNINPCGYAGLEMCQLSELVHRPDLRCEEVAPKLVAHFSTILGYNNQQIINN"
     gene            24932..25939
                     /gene="lipA"
                     /locus_tag="PXB09_000545"
     CDS             24932..25939
                     /gene="lipA"
                     /locus_tag="PXB09_000545"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDL5232693.1"
                     /translation="MATSTAQTTATATVKKMSPFKMEKGVKYRDAAKTSVIQVRNIDP
                     DQELLKKPEWMKIKLPANSAKIDSIKNGMRRHGLHSVCEEASCPNLHECFNHGTATFM
                     IMGAICTRRCPFCDVAHGKPLPLDPDEPRKVAETVQDMKLKYVVITSVDRDDLPDRGA
                     AHFSATVREIKALNPHCKVEILVPDFRGRVEQAVAILKENPPDVFNHNLENVPRLYRE
                     VRPGADYKWSLELLKIFKQEFPHIPTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTI
                     GQYLQPSRHHLKVERYVPPAEFDMFREEAEKMGFEHAACGPFVRSSYHADLQAKGELV
                     K"
     gene            26126..27229
                     /locus_tag="PXB09_000546"
     CDS             26126..27229
                     /locus_tag="PXB09_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5232694.1"
                     /translation="MKKLLLNSVFAATLLAFGATANAEIKTITDVLGREVKVDVPAKR
                     VALTFYYPDYIAVTGVENFDKVVGISREFWEKFNPGSWALFAEKMPNLKNIADLGYVN
                     SGTFSTEKTIALKPDVLVLPEIQYQALASEISRIEQAGIPVVVDFNKQTIENHTKSVR
                     VFGQLTGTEERAEKIAKEYEEGIADIQSCIDNAKVSKPKIYAEFGNKGPKEHSFTFGK
                     NMWGAIAETVRGDNISAPFVENWGQINPEQVLVSKPDVIMISGTELGNDTNPEIMSMG
                     INIEEADAQKRLKGFIERTGWKELPAVKSGRVYGLYHTASRSISDLASAQFMAKALYP
                     ELFKDIDPEKTYLDFHNNYLPITPKGTFFMQLK"
     gene            complement(27320..>28045)
                     /locus_tag="PXB09_000547"
     CDS             complement(27320..>28045)
                     /locus_tag="PXB09_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5232695.1"
                     /translation="LVVADKINLHFEQGKIYTLLGPNGAGKSSLLKTLFGEIAHQGTI
                     DFDGNKLTSSHLHSWRKEIGYMPQDTQVEASLSALEVILLGQLDSLNMYISDELLNEA
                     VDIMDKLGISHLAHQDIMRLSGGQRQMVMFAQVLLRKPHILLLDEPVSALDMYHQINL
                     LEYVNAYTRANNLITIMVLHDLSLAAQFSDSVMLLSEGKFKHKAELVICWNAILFRDS
                     IMSILRFYMMETARRLSARFANV"
BASE COUNT         8011 a         5520 c         6202 g         8312 t
ORIGIN      
        1 tttcttttat ttaaaagaga aagggctaga taacgcccaa atcgcttttt tcctttcatt
       61 gctgttgttt tgtaatcagg cattggcaat tttagccggc atttgggggg atcgctacgg
      121 cttggcaaaa atgatgttat tgggctgttt attagatgtg gttgcctata tgctgttttt
      181 agcagcggat aattacctca ttttattgtt ggcaaccact tgctttgggt tggggagttg
      241 cttattcggc actaatgcca gagcctgttt actggcgatt gccggcgatg aatatgctgc
      301 taaaacccgt ttacaaggca aatatctaaa agtcaccagt atgtcttcaa tgctcgcccc
      361 gctgattatt attccgttta ttaggtttga gatgattgaa acgctgattt ggatctgctt
      421 tattttggaa gccggcttgt ttgcgtttat ggtcaagccg ttttattcgg tggaaggcgt
      481 gaatggcggc gtgaaatttc gtttcgcaca aattaaggaa atcatcaaca aagagttttt
      541 gttcgctcac ttaatgctat ttgtgccgct gagtgatttt tccgtattta ttcgacaatg
      601 tcctgcacgc accggagcat tcgccgattg cgttattcat caacggtgtt ttaaccgtca
      661 gtttgcaatc gactttttct cgtaaaatca acctcaccaa acagcaatta atttggattt
      721 cgccgttatt agcggtggcg attattgccc cttggtttat tgcggtaaaa gtcgcaactc
      781 tgaccgctgc ctatatttac accgtgattt ttacggtggt ggaagtgtac gccctcacag
      841 caatggcaaa tttactggtg aaattcgaca acggcaaaaa ccgaggcttt atttttggct
      901 catcgaggct gattttatcg atcaccacaa tgatgacaat gaatttagta ccgcttgtct
      961 ttttggtgta aacaagcggt cggatttagt ggattttttt gcaaatgaaa ggaatcgttt
     1021 aatacaacac gtctgccagc catagtctga attttaagct caaatagcta gtgtagccgg
     1081 tggtgtggtg ggcgatttta ccgtctttga taatcaagat ggttggggtg gcttgaatgt
     1141 tccaacctcg agagaaatca ccgcttgggt cattcaaagt agcgaaagtg tagccatttt
     1201 cattgagata ggcttgtacg tcattttcat cgccggattt cagggcaaca cctaaaactt
     1261 ccgtgccgtc attcgctaat tgttggatat ttggcgaaac cacttggcaa tagtggcacc
     1321 aacttcccca aaaatagagt agcatcggct tctcgtggct taattgggcg attactttcg
     1381 gctggtgttg aatatcataa tgcacggttt gctcaaattg tgccggagcg gagggcgagc
     1441 gataccaatc aaccaccagg ctaataatga taaacaggct gccgtagagg aaaatatttt
     1501 taagtaagcg agatatgagt gattttttct gcataatata gttatcttaa atagcaaaaa
     1561 cctgtgaaat gcctccacag gttttttatt tgagtttgat tagagaatat caagcaattc
     1621 cacttcaaac actaaggtcg caaatggtgg aattgatgct tctgcaccac gttcgccgta
     1681 ggctaattct tgtggaatgg ttaaacgcca ttttgagcca accggcatta attgcaatgc
     1741 ttctgtccaa ccacgaatta ctccgtttac cgggaattct gccggctgac cgcgttttac
     1801 cgagctgtca aacacggtgc cgtcaattaa tgaaccggtg tagtgaacac gcacggttga
     1861 agtcgcagtc ggtttttcgc ctgtgccttc ggttaaaatt tcatattgta aaccgctgtc
     1921 ggtaacgatt acaccgtttg cttttttatt ctcttccaag aacgctttgt tttcggcatc
     1981 aatcgctttg aatgcttctg cttgagccgc ttccgcacgc tgacctaatt cttgtaatgc
     2041 agcggtcact tcattgatgt cgattgccgg ctcattgttg tttaacacat cataaatacc
     2101 acgggcaacg gtttctgcgt ttacgtccat tccgctgcct aaaagttgct gaccaatttg
     2161 taaaccgatg ccgtaaccgc cttttgcttc tactgaatct aatccaactg aattgaaatc
     2221 taatgccatt ttctgttcct tttgagttta ttgaatactg tattgaaaga aatacgattc
     2281 acttaatggg ggtgaaattt aagaatacaa ggtgtgaaat gaacaagcgg ttatttttct
     2341 gcaaaatttt gcaacaaaat aaccgcttgc agaacattag aaagttaaat atggagcaac
     2401 tttctcaatg gttgcatcgc caatgccggg aatgttcgcc agttctgctg catttttgat
     2461 tttaccgtgt tttttgcggt attctacaat cgctttggct tttgcttcac caatgccggt
     2521 aagcgattgt aattgctctt cgttggcagt gttgatattc actttttgtg attttttcac
     2581 tgctgacatt ttttctgttg cagctgcttt cattgaggcc gctttttcag cggttgcggt
     2641 tttggctgaa tttaaggttt catgagcagt tgcagctttc tctgcggtgg cggcttttgc
     2701 ttcctgagct ttcactttca ttgtgtcgct tgcagatgcg gctttcgctt taatcacgtc
     2761 cgttttttct gctgtggtgg cttttactgc gtccattttg tttttagcgg aatctttaaa
     2821 tgattcggtt ttggcttttg ctatcgccat tttttccgca gaaccggctt ttaactccgc
     2881 tgctttctct tttgttgctt ctttagccac agttgctttt tcggcaacag aggctttaac
     2941 tgcgttcatt tgttcagccg cagtaggttg agtggtttgt gcaaatgaag tagctgaaac
     3001 agccattgcc acgcccaatg ctaataatgt ttttaatgct tttattgaaa atccttaaat
     3061 ataaaagagg gaaaataatt gaaaaaaact gtattttaag actgaggctt tagataaaag
     3121 ttcaatcggt aggtataaat ggctcggttg tggttaaaac aaccgagtat tgaggctcac
     3181 tagagaagta acatactgcc ccatttgata atatcgaaga agaatttatt atcattggtg
     3241 gcaactttat cgcctgattt cccttcttgg ctattggttt cttcgatcat accgctttga
     3301 tactgccctt ttaccactgc caaatcattt tttgcattgg tgcgtaaggt cgcacattgt
     3361 tttttcggta acgcttcaac cgcttcgtta tttttcagtt ttttgaataa atattgagcg
     3421 taacccattg atttttcatc attttgaatg atttttacat actgctcccc gataatctct
     3481 tcaagcggat agaaaaatac atattgtgag aaaatataag aatcttcttt ggaaaaatgc
     3541 tcttgctgaa tacgggttaa attggggtag atacactgtt ttgcctgttc gctggcaatt
     3601 acccattttt gagcattttc ttccgaaagc acataatcgg cattggcaaa ttcgcccggg
     3661 aatgcttccg gttgttgcgg ttcattgctg ctacaagccg ccaataataa gcctgtagaa
     3721 agtagcacta tttttcttaa cattctgacc tctgttttaa aaatttggtg cattgtaaca
     3781 aaaaaacagc ggctgaccat tgcaaatttt cagcgaaaaa tgaccgcttg tttttatccc
     3841 ttggctgaat ctgttaaact atcagcaatg atttctcaca ataaatagac tgatgacaca
     3901 agatttctcc acccatacgc caatgatgca acaatatttg caactcaaag ctcaaaatcc
     3961 ggacatacta ttgttttacc gaatggggga tttttatgag ctgttttatg atgatgcgaa
     4021 acgagcggca gcattgttgg atatttcgct caccaagcga gggcaatctg ccggtgagcc
     4081 gattccgatg gcgggtgtgc cttatcacgc agtggagggg tatttggcga aattggtggc
     4141 gttgggggaa tcggtagcaa tttgtgaaca gattggcgac ccagcaacct caaaagggcc
     4201 ggtagaacgc aaagtggtac ggattgttac gccgggaaca gttagcgatg aggcattgtt
     4261 acccgaacgc caagataact tggtggcggc agtttacgaa gaaaaaggca catttgcgat
     4321 tgctacgcta gatatgacct ccgggcggtt tttaatcagt gaacttgcta gcaaagaggc
     4381 tctatccgcc gagttacaac gtgtacaacc ggcagaaatt ctgtatgcgg aagatttttc
     4441 cgctgcctca attttaacga attacaaagg gttacgccgc cgtccggtgt gggaatttga
     4501 gctggtaacg gcgattcagc tgctaaatcg ccaattcggc acgcaaacac ttgccggatt
     4561 tggggtggaa aaagcggtgg tggcactttg tgctgccggc tgtgtcttgc attatgccca
     4621 agaaacgcaa cgcaccgctt taccgcacat taacgcaatt catttggcac aacatagcga
     4681 tactattttg ctcgatgcag ctactcgtcg caatttagag ctgacccaaa acttagcggg
     4741 tggcacggaa aacacgctgg cggcggtgtt agataaatgt gtgaccccaa tggggagccg
     4801 tctgctcaag cgttggattc atcagccgat tcgagattgt ggtaaattac aagcccgaca
     4861 aaaggcgata acagcattga tacaatatga gcgaatgtcg gatttacagc cgttattaca
     4921 acaagtcggc gatatggagc ggattctcgc ccgagtggcg ttgcgtacgg ctcgccctcg
     4981 tgacctcacc cgactacgca ctgcattggc tcagttaccg gaaattgcaa aaaattcaca
     5041 aaatctgacc gctagtatcg atcagctttt ggctcaactg gcggatttca gcccgttaca
     5101 cgatttgctg gagcgggcga ttatcgaaaa cccaccacaa ctcattcgtg atggtggggt
     5161 gattgcagaa ggttataatg ccgagcttga cgaatggcgg caactttcgg acggggcaac
     5221 gcaatatctg gaaaatttgg agatcagaga acgtgaaagc accggcattg attcgctgaa
     5281 aatcggcttt aatgcggttc acggctatta cattcagatc agccaagggc aagcacacaa
     5341 agccccgatt cactatgttc gccgccaaac gctcaaaaat gcggagcggt atattatccc
     5401 tgagctgaaa acttacgaag acaaagtgct gaaagcaaaa ggggcatcgc ttgcccttga
     5461 aaaacagctt tatgatgaac tgtttgatgt gttaatgcct cgcttaggcg aattgcaatt
     5521 agcggcgatg atgctgtctg aacttgatgt cttaaccaac cttgccgagc gagctgatag
     5581 tttaggctat gtttgcccga gctttagccc gatgcgaatg gtgaatatta aaggcggcag
     5641 acacccggtg gtggagcagg ttttaaccga gccgtttatt gccaatccgg tgtttttaaa
     5701 ttcccaacgg catttattga ttgtgaccgg cccgaatatg ggcggtaaaa gcacctatat
     5761 gcggcaaatt gccctcatta cattgatggc gtatatcggc agttttgtgc cggcagaaag
     5821 tgcggaaatc ggcccgattg accgtatttt cacccgaatt ggggcaagcg atgatttagc
     5881 ttcagggcgt tcaaccttta tggtggaaat gaccgaaatg gcgaatattc tgcatcaagc
     5941 caccgaaaac agccttgtgc tgattgatga aatcgggcga ggcacttcta cctatgacgg
     6001 cttatcactg gcgtgggcgt gtgccgaatg gctggcgaag aaaacccagt cactcacttt
     6061 gtttgcaacc cactattttg aacttaccgg cttgccgaat cagctcaaag gggtggcaaa
     6121 tgtgcattta gacgcgcgtg aacatcaaga cagtattgtg tttatgcact cggtgcaaga
     6181 gggggccgcc agcaaaagtt acggcttggc ggtggcagcc ttggcgggtg tgccaaagca
     6241 agtgattcaa ctggcaaagc agcgtttggc acatttggag gaaatttccc accaaaccaa
     6301 acaagcaaac gaacatccac aggcggattt gttgttttcc gatggttttg atttgcaaaa
     6361 aaatgaagca attcaaccgc ttgtagtaga aaatgaagtt gaaaaagccc tgaaagccct
     6421 tcagcctgat gaacttaccc caagacaggc tttggacgag ttgtatcgct tgaaaaaatt
     6481 gttggggtaa attgaaaaaa taactaagaa atcgccccgt ttaaggggcg tttttgttta
     6541 gaacgtatgt gaaaactcaa tatagacacg gtttttgtca taactataga agctatgatt
     6601 gctttttacc ttgttatatt gccacgttaa gcgaggggta atacccttaa aatgcaaggc
     6661 tctgtgccag atgctggctt gcacaccata ttcactgtta cgttgtgtaa tttggaaaat
     6721 cggcattggg gctcggtatt gtttgcgggc gtagctggca cttaattggg ttgaaagccc
     6781 gtttttccac tcttgtcccc aaccaataga aacacctcgg cgaataaagc tatcatctaa
     6841 atcacggggg ctggtgcggt taaaattcgc ccccacaaac caatattgcc ggctgttagg
     6901 gtaaaaatag aggctcgggg caataaaatg ataattgccg tctaaatgtt ggcggcgagt
     6961 gtaacgctgt tccgcatatt cgtagctgat tgcagattgc cactgtggag taatccaata
     7021 ttgccagcgg gcattcacac cgcctgcgtt ggagtagcgt ttggtgcttt cggtttggct
     7081 tgagccaccg gcataccaca tctgctcaaa aaacggcaac aaggtgattt tttgttttgc
     7141 attttgataa cccaagccga ggctttctct gagcgaatat tcgttatatt ttttgttatt
     7201 ccagtaatat ttgccgtttc cgtttaaacg aaactcgtgg aagaaaccat tgccccaaga
     7261 ccacttttta tccgcctcaa agtgaaagcc gaccccttgg gcggattctt ttttcggtgc
     7321 agtccagttg ccataggtcg tgcctgcatt tggagcattg ttgatattcg ggtcattcaa
     7381 ataggttaag ccgccttgaa aactccattg atcttgcttg ccaatcgcct ccaaatagct
     7441 attgaccgca tttgcaattt cttgcggtaa tttgtccgct tgtaacttat aaaattgagc
     7501 ctctgcggct tcattttccc gattttcaaa caatgcaacc gctaattgca tacggattgg
     7561 ctgattttca gggtattttg ccagtagctg acggtagcct tttattgcct ctgaataatt
     7621 ttgttttgct ttggcattaa ctgcctccgc ccattgtaca acttcgctgt tttgtttact
     7681 ggcgggtaat tgttgataaa taggcagtaa gaattgaaca ttctcagtgt ggttagtgac
     7741 caacgcagtt agcattgccg agttgagcaa ctcaggctgt tgaagcagct gttggcttga
     7801 aatagagatc gattgccggt gagcctgtgc attaaccgct tgtggtttgg cttgaggttc
     7861 aggcttttct aatgtatgta ggtttttctg cattcgctgg ttatccattt tttcttgaag
     7921 ttgagccggt gtggtttccg caaatgccag gtttgaggta aggattaaaa gcgttgagac
     7981 tatttttttc ataaagctat cttttatttg aatagaaaag gctatttttc aatagccttt
     8041 agtgaagagt tttgaggttg ttttgctata tttttcatta agttaaatat atagctttaa
     8101 atatacctac tatatgctac taaataaagt atgcaatatt tgttatgctt tgtaaataag
     8161 aggaaagaga tccattttgg gtagaaaata gctcattgct tggaacttta aatggttatt
     8221 tcaccaattc aaccacttcc ttcgtcaatt tcccaatctc ctcccacttc tgttccttaa
     8281 tcagggattt ctccacaaac caagagccgc cgcaggcgac tacgttggga atggcgaggt
     8341 agtcgttgat gttttgtggc gagatgccgc cggtcggcat aatctgtaag ttgccgtaag
     8401 ggccgagcag ggctttaatc attttcacgc cgccactggc ttcggcaggg aaaaatttaa
     8461 ctgcttgtat gccaagttcg agggcggctt caatcgccat cgggttgttc acacccggtg
     8521 taacaggcaa acctaacact tggcaatact taacgatagt cggattaaaa cccggagtca
     8581 caatgcaatc cgccccagcg tttttggcag ttaagacttg ctctttggtc agcactgtgc
     8641 ctgctgcaat caatacttcc ggatagttgg cttgcactaa tttaattgcc tcttcagctg
     8701 cttccgagcg gaaagtgatt tccaccaccg gcaaaccgtt ttcggaaagg gttttcgcca
     8761 gcggtaaaat atcttctgct ttatccaaag caatcacggg aacaactttc agttgtctta
     8821 atttttcaat gatttgttcg gtggtgtaac gcatttctag cctcattatg ttgtattgca
     8881 agcggtcgct tttgtaaaaa attttgcaaa tttaaccgct tgtcgttgtg ctattgttgg
     8941 tctaaatgga ttgttcaaac tgcgatttca aatgagtagt ggcggatttg gcaataatcg
     9001 cccctttgtg ctgaatgacg ataccggcaa cggcatttcc ttgttggcaa caggtaacga
     9061 catctttacc caataagtaa ccgttaagga agccggcatt aaaggaatcg ccggcggaag
     9121 tggtatcgac caccttctct accgcaacag ttggcacaaa agtacgctcc ccgttttgca
     9181 acaccgttgc ccccagagag ccttgtttca ccacaatggt ctgaatgcca tattgagtga
     9241 gacggtcaaa ggtggcttgc tcattcacat cgccccaaag cagttgctcg tcatcaaagg
     9301 tcacgagagc taaatcgact aattgcaaca gctcggcata gtgagcttgg gcagcagcca
     9361 cactttccca cagtttcggc cggtaattgc tgtcaaaggc gattttcacc ccttgtgttt
     9421 tgagctcacg caactgtgca atcagcaaag tgcggtcgtt ttccggcaag atggcaaggc
     9481 tgataccgct caagtaaacc atatctacct cgtttagtgc cgagagtgct ttgggatagc
     9541 cggggtgttg caacaaataa cgggcggcag attgatttcg ccaatagagg aacgttcgct
     9601 cgccctgttt atccaactga atcagataca gccccggctg gcggtgctcg tcacgcaaca
     9661 caaaatccgt gttgatatta tccacctgcc acgccgctaa cattccctga ctgagcttat
     9721 ccgtgccgag agcggaaata taacgcacct caatctgttc aggcgaactc acccgagcca
     9781 aataggtagc ggtgttgagc gaatccccac cataggtttg gtgcatctcc ccaaacggct
     9841 ccccgtttaa ctcaatcata cattcaccga gaatggcgag ttttttcata ggaatacctt
     9901 ctaagttaca cgccgctata agcagagaat ccgccatcaa caggtaatac aacgccattg
     9961 ataaagctgg aataatggtg atccattaaa aataggattg cacctaccaa ttcatcggct
    10021 tgtccgaaac gtcccatagg ggtattcgtg aggattttat tagctctagc tgttggcgta
    10081 ccatcggcgt taaatagtag agctttattt tgattactca ctaaaaatcc cggtgcaata
    10141 gcattacagc ggatacctac ttttgagaaa taaactgcta accattgtgt aaagttactg
    10201 attgcagatt ttgctccaga ataggcaggg attttagtta atggagtaaa ggcattcata
    10261 ctggatatat taatgatatt agcgccctct ttacccaaca tatcttttgc gaaaacctgt
    10321 gttggtaata gtgtgcctaa gtaatttaaa ttaaatacaa attcaatccc tgctttatct
    10381 aattcaaaaa aagattttgt attttccggt aagttaatat cgtgaaattc attatctgtc
    10441 gttgcttttg gattattccc acctgcacca ttaattaaaa tatcacaagt gccaaaatct
    10501 tttagaattt catctcttgc ctgttttatg ctttctaatt caagtacatt agtttggtac
    10561 gctttcgcaa tatagccttc atcggcaatt tcagaagcaa aattctgtgc tgcttctaga
    10621 ttgatatcga gtagtgcaac ttttgcacct gtttttgcaa tttcttttgc aaaataagca
    10681 catagcacac cacctgctcc ggtaataaca acaactttat ctttaaaatt atgattttgg
    10741 gcaatagaca taataagaac tcctaagata accaattcat tggtacgata ataatttcag
    10801 ggaaaagtat taataagaac agtattgcag catagactag caagaatgga tagatacctt
    10861 tggttaatct agcaatacca atttttgcta taccagaacc aacatataat accgttccaa
    10921 caggaggcgt aattaaaccg atagataggt taattaccat cataatacca aagtaagcaa
    10981 tatcgatgtt atacgctctt agtaatggta atagtactgg tacaaaaatt aatactgctg
    11041 ggattaagtc cattacacag ccgactaata ataagaaaat cataatgacg aacattagta
    11101 cagtcgggct atcggtaata cctttgataa actcaactaa ctccataggt atttgagcaa
    11161 cagtaactgc aaatgcagat atcattgccg ccgctgcaac aaacataacc attgcagttg
    11221 ttttgatagt gcctaagaaa acatcttgga ttttatctaa ggttaaccct tttaagataa
    11281 tgctgattat tgctgcataa attgctgcta caactcccgc ttctgttggt gtaaagatgc
    11341 cgcctcttaa acctacgata ataataattg gaagtagcaa tggtaagaat gctgatttaa
    11401 atgcagccca acgttcttta cctgtttttt tcggttcaac ggtttgttct tcgtttcggt
    11461 ataagaattt ccaaactaac cataaaccta aaaccattaa aaagcctgga accattcctc
    11521 ccataaataa tttggtaatt gatgcaccgg ctgtaatacc atagacaatc attggaatgc
    11581 ttggtgggat aactacagaa ataatacctg ctgcacagat taagcctgtt gaacgtgcaa
    11641 catcatattt tcttgcaacc atcatcggaa taagaattgc accgagagcc gcggtatcag
    11701 caacagcgga gccggataaa cctgcgaaaa ttaagcctga aataatcact acatagccca
    11761 atccgccttt aatatggccg accatgctca ttgcaaaatt gataatacgt tcggaaatac
    11821 cgccgtgttt cataatttca ccggtcagca taaaaaacgg gatagccatc agcggaaaat
    11881 tatttgtacc cattacgaaa ttctccgtga ttaattgggc atcaaacata tccattttcc
    11941 atagcataaa actggcacta agtagcatag agagagcaac gggcactcct aaaaagagaa
    12001 agaggaatag acttcctaaa aatagccata acatatttat ttctcctctt taatgaaagc
    12061 tagccgaata tgtttccata aatttgtgaa tacaatagcg aaataggaga tagatgaaat
    12121 aactgctgca aaatatagaa acgcagatga aatttcagtt gctggcattt tttgtgtgta
    12181 tgtcaataac attaactggt atgcaccgta agtaataaat gacagtgcaa ctaagactaa
    12241 aatatcagca aagaacagta agtacatttg tacttttgcc ggtagtgcag aaacaacaat
    12301 atcaacggtg aggtgtcccc tttcctttgc aacgaggatt attcctagaa agatcatata
    12361 gacaaagcag attctggcga attcctcaga ccaagctatt ccggagtcaa aaaaatatcg
    12421 taaaaccgca ttaaaaaaga ctaggataat cattgtagat agagcaatta tcgcaaggag
    12481 tttgagagtt ctatctaatg ctgtagaaat ttgcataaat ttctccttct tcatttagat
    12541 gggcgacctc ttttatccgg tcgcctcgct tattgcttat ttggctgcgt ggatttttga
    12601 aataacatct ttagcccaat catatttctg atagaaattt tgataaagcg tttcggatgc
    12661 ttttaacata tcagctttaa attgttcact cggaacaatg acttctttgc catttttgtg
    12721 gaagaaatct tttacatctt gttccatctt catcgctaat tcccactctt tttcttggta
    12781 gagttttgct gcctctaaga agattgtctg atcttcttta gacattttat tccaagtttt
    12841 caaactaagt tgtagtaagc caggtgagaa aatatgatta gattcaataa tatatttttg
    12901 cacctcgtat aaaccagaat ctttaattaa catatatgga ttttcttgcc catcaatgac
    12961 tttttgttct agtgcggtaa atacttcact taaaggcata ctttgagggt taatatgcat
    13021 tgcttttgcc cagtccacaa acaacgaatt tagtggaacc cttaatcgca aacctttaaa
    13081 tccatcaaaa ttctcaactt ttttattgga agagataaca cggaagccat tcataccata
    13141 cgctagtaat ttaatgccgt acttctccat tttttccccg atttcttgag caataggaga
    13201 ttctagaact ttcttagctt cggcattatc tttaaataga tatggccact cccatacgcc
    13261 aaaaattgga tcaacatttt gtagtaataa acctgtaatg ccaccttcaa tcgtgccatt
    13321 acgcaaacca tttacaattt gatcttctcc tcccaactgg ttatttggga aaatacggat
    13381 ttcgtagcgt ccttctgttt tttcttcaat ggtttttttg aagtattcct gcaatgcgat
    13441 atttgatgga tgaacatctg aattatagtg accaatctta atgatagtct tcgcaaatgc
    13501 cgaaccggtg aacatcaggc tagaaattaa tagagcttta gtgaaagttt tgagtttcat
    13561 agttattacc tcgtaggtga gttagtattt aaaatacagc gatgattttt aagtaatcat
    13621 caggattagc tgagagttct tcgatatagt gaggtatttc atcaaatgta attaccttac
    13681 taatgatatc ttttggttca attcttcttg atgccagaag ctctaatgct tcttcaaatg
    13741 cccccttgct tgttcttgcc ccataaatat taagttcttt gaaggtgatt aaattagttg
    13801 gtaatggtgt ttctgttttc ggccatccgg ttaaagcaat acgtccagca aaagaggtgt
    13861 atttaagcgt attttgtact gcgacatttg ctcctgacgc ttcaataacc acctctgcca
    13921 ttcttccatt ggtaattgat ttaatagctt caagatcgtt ttcttttgtt ggattaattg
    13981 tgtgtggaat accaatagat tttgcgtaat ccaatcgctt atctaaaatg tcaattaaaa
    14041 tcggcgtcgc tccataagct ttggcaacca atgcagccat tagcccaatt gcccctgctc
    14101 caatgatagc aacatgttca ccagctttga cttttgttct atgaattgcg tgtaaggaaa
    14161 tagttaaggg ttctgctaac gctaattcgt gtattggcat atcaggtgtt ttgattatca
    14221 tatgggctgg atgtctaaca acctcttgca ttgccccatc aatatgtacc cccaatactt
    14281 ttagagattc gcaacaattt gttctaccaa tggagcaggg atagcaatgt ccacaataga
    14341 tgtaaggttc aatgatgaca cgatctccta cattaatatt atttggcata cctttaccag
    14401 actcaattac tgtgccaacg atttcatgcc ctaaaattct aggataagta acaagtggat
    14461 tagtgcctct aaatgctcca atatcagagc cacatatccc cataccttct actttgatta
    14521 gcacatcatt ttcaccttta acaggataag aaacggtttg tataccaact ttattaggtt
    14581 ctacaagaca tactgatttg agtggttttt ccatgatttt gtcctttttt gataaagtta
    14641 atcgacattt tgtagtgtca atggtatttt atgcacagat actaacacca aaaaacaagt
    14701 ttggcattcc aatttttgtg attttgtgaa cctgatcaca aaaatgaaat tttggaattc
    14761 caatttcgtg aggatttatg caaaatagtt ccagaactta cactaaaata ggaaaaattc
    14821 tcaaagagga aattgctcaa ggaaaataca gagtaggaga taagttacct actgagagag
    14881 atatttctga aagatttgaa gtgagtagaa ctatcgtaag ggaggcgata gtgatgctag
    14941 aagtagaaaa gcttattgag gtaaaaaaag gatcgggcgt gtatgtcatt agagtcccgg
    15001 agctttttcc agaagatttt ccagaagaga aagataatga gctaagggat gttgggccat
    15061 ttgaactact tcaagcacga caattattag aaagcagtat tgctgagttt gcagcacagc
    15121 aggctaccaa acaagatata caagtacttc gtaacatatt agaaagtgag aagaaacttt
    15181 tgttagagaa gatggatgac tacagtgcag ataaggaatt tcatcttgca ttagctcata
    15241 tgacgggtaa cgatgttctg attcaattac aagaacagct ttggcgatac cgctttaata
    15301 gtgcgatgtg ggctcagcta cactccagaa ttttacagca tgatcatcac cacttgtgga
    15361 tagaggatca tgagcgaatt ttaaatgcaa tacagagaaa aaatcctgca ttagctcgta
    15421 aagcaatgtg gcaacatcta gaaaatgtta aaactaaatt gcttgaattg tctgatgtag
    15481 aggatcctaa atttgatgga tatctattca atgtaaaccc cgttgtagta ggtatctaaa
    15541 acctaaacta cacaatgagg agtttactat ggaacaagca tggcgttggt atggaccaaa
    15601 cgatccggta tctttagatg atgtaagaca agcaggggca acggggattg tgacagcgtt
    15661 gcaccatatt cccaacgggc aggtgtggtc ggttgaggaa attaataaac gtaaggcatt
    15721 attagctgaa aaagggctgg tttggtcggt ggtagaaagt gtgcctgttc acgaagaaat
    15781 caaaactcaa acaggcaact atcagcaatg gattgataac tataagcaaa ccttgcgtaa
    15841 tttggcaagc tgtgggattg atacggtgtg ctataacttt atgccggtgc tagattggac
    15901 tcgtaccgat ctggagtatg aaatgcctga tggctcaaaa gcattgcgtt ttgaccaagt
    15961 ggcgtttgcg gcgtttgagt tatatatctt aaaacgcccg ggagcggaag ccacttactc
    16021 atcagcagaa caagccgaag ccaaagccta ttttgagcag atgagtgacg ctgatattgc
    16081 aaaattaacc aaaaatatca ttgccggttt gccggggtct gaggaaggct atacgctcga
    16141 agaattccaa gcacagcttg accgctatca agggctctcg gctgaaaaat tccgtaccca
    16201 tttagcctat ttcttaaatg agattgtgcc ggttgcacaa gaggtgggca ttcgtatggc
    16261 gattcaccct gacgatccgc ctcgcccgat tttaggcttg ccacgcattg tttcaaccat
    16321 agaagatatg caatggtttg tggaaactca accgcttgca gccaatggct tcacgttctg
    16381 taccggttca tacggcgtat tagccgagaa tgatttggtc aaaatggcag agcagtttgc
    16441 agatcgcatt tattttgctc acttacgagc tacccaacgt gaagaaaatc cacaaagttt
    16501 ccacgaagcg gatcatcttg ccggtgatgt cgatatgttt ggcgtggtga aagcattact
    16561 taccgaagag tatcgccgca aggcaaatgg cgatcaccga ttaattccaa tgcgtccgga
    16621 tcacggccat caaatgctcg atgatctgaa gaaaaaaacc aacccaggct attctgcgat
    16681 tggtcgttta agaggattag cggagttccg tggattggag ttggcactta agaaagtcta
    16741 ttttaacgat tagccttatt tattataatg ccctctactg tagagggcat tttatagttt
    16801 gatatgttca aaaaatattt cggcgaaata atcctttttc tcgttacctt tattgctgca
    16861 gcggggtggt ttttctctaa acacgcttta gttggattac cgcctattgg ctttatggga
    16921 gggcgtttta tattagcctc tttgattctt ctgccttttt cttaccgaga gctgtatcgt
    16981 ttagataagg ttcaagttaa atattcggtg attaccggtc ttacttacgg aatttatact
    17041 attttttggg tattggggct ggcttttagt acagtgtttg gtgaaggggc ttttttggtg
    17101 agccttgcga tgctgattgc tcctttgctc tcttggttga tattcaaaca tacgccaccg
    17161 aagatttttt ggttagcctt acccattgca ttaagtgggc tttactttct ttctgcggag
    17221 aaaggcatct ttcatttttc cttaggcagt acgatttttc tggtgtcatc agtgtttggg
    17281 gcgttatatt ttgtgttaaa taatcaatac gccaaacaag tctcattgtt tccattaatt
    17341 actatccaat tggcgatagt cggtgcggtc tgtagcttgt attcctattt tatggaaagt
    17401 tggcatttcc cgattctcac cgaagtgtgg ctctggtttg ccgcaagtgt attgattgcg
    17461 acaaatttac gttttttaat gcaaacactg gggcaaaaat attgccatat tggtacttct
    17521 gcactcatta tgttacttga gccggtttgg acattgttat tgagcgtgat gttattgggg
    17581 gaacaactta gtgcgacaaa atggctaggt tgcagcttga ttttgatagc attgattatt
    17641 tatcgactcc ctattctacg actcaaaaaa taggtaaaac aaaagcaaat atgccatagt
    17701 attggaagca gttaggcatt ttagagtaag taacaagcgg tcatttttgc aaaaaatctt
    17761 gcaaaaatga ccgctttctt tcttttatcc gttcaatcta tgttaaaatt ctacattttt
    17821 ataagatgag agagagaaac gtggaacaga atttagtcga atttttaacc aaaaccttag
    17881 atgatttaaa ggcacaagat attttagcca ttgatgtgaa agggaaatct agcattactg
    17941 atacgatgat tttagccacc ggtacatcga gccgtcacgt tgcttcaacg gcagagcgtt
    18001 taattacgga agcaaaacag gctgggttcg aggtatttgg agatgaaggt aaagcagttg
    18061 ccgattggat cgtggtcgat tttgggaagg caatggttca cttgttgcaa tccgatagcc
    18121 gtgagatgta ccaattagag aaactttggg cgtagcagtt caataaggaa cgacaagcgg
    18181 tgatttttgc aacatttttt gcaaattaaa ccgcttgtaa gtgaaagaga gatgaaaatt
    18241 caattaattg cggttggcac taaaatgccg gcgtgggtaa cgacagggtt tgaagagtat
    18301 caacgccgtt ttccgaaaga gatgccgttt gagttggtgg aaattccggc aggaaaacgg
    18361 ggcaagaatg ctgatactaa acgcattctt gagcttgaag gcaaagcaat gttggcggca
    18421 gcgggcaagg caaaaatcgt gactttggat attccgggca aagcgtggac aaccgagcag
    18481 ttagccactc agttagaggg ctggaaaaac gatgggcgag atgtagcgtt attgattggc
    18541 ggcccggaag gattatcacc ggaatgcaaa gccgctgccg agcagagttg gtcgttgtcg
    18601 cctttaacct tacctcaccc actggtgcgg gtggtggtgg cggaaagttt gtatcgggcg
    18661 tggtcggtta ccattaatca cccttatcat cgagagtagt gagtcatttt agatagtgtt
    18721 atatgtttgg taaattagca aaattcacag cttcaaacca gcgagaaaag gtgcgagacg
    18781 ggcaggcaga aagcaatctg tatgcccgcc gtgccttagt tgcgtttctg ggggtgttgg
    18841 cgttaagtgg tgttttatta accaacttgt atcacttgca agtggtgaat tatgaggact
    18901 accaaacccg ttcaaacggt aaccgcatta aattgttgcc tgtgccaccg gctcgaggct
    18961 taatttatga ccgtaacggt aaagtattgg cggaaaattt aacctatttc gggctgttta
    19021 ttgtgcctga aaagacggaa aacattgagc agactttaac cgagttgaag gatattgttg
    19081 ggctgacgga cgaagatatc gagaattatc ataaagagaa aaaacgcagt tctcgctata
    19141 ccccaattat gctcaaaggc aatttgaatg aggctcagat ggctcgtttt gcggtgaacc
    19201 aataccgttt tccaagttta gatgtgcagg cgtattataa gcggaattat ccttacggcg
    19261 agcttttaac ccatattatc ggttatgtgg cgaaaattaa cgaaaacgat aagaaaaagc
    19321 tgcaagaagc cgggaaattc ggcaattatg ccggttcgca cgatatgggg aaattgggga
    19381 ttgaaaaatt ctatgaagat cagctccacg gtgtcaccgg ttttgaagag gtagaaatta
    19441 ataaccgagg gaaagtaatc cgtaaattgc gtgaccaagc aggggttgcc ggtagcagta
    19501 ttcgcttgag tattgatgtg gaattacagc aatatgtgat gtcgttaatt gctaagcata
    19561 aaggggcggt ggtggtgctt gaccctcgtg atagcagtat tttagcgatg gtctcaaacc
    19621 caagttatga caataattta tttgtgggcg gtatttcagg gcaggattat aaagcattat
    19681 tggacgatcc aacccgacca ctttatagcc gtactacaca aggcacttat ccaccggctt
    19741 caactattaa gccatttatg gcggtggcag gtttggaaga gggaatgatt accccttcta
    19801 ccaccatttc agaccccggc tattggattt tgcccggcac tacacaacgt tatcgagatt
    19861 ggaaacgtag cggacacggt gcaactaatg tgaataaagc aattaccgaa tcgtctgata
    19921 cctttttcta tcaattagcc tataaaatgg ggattgataa aatgtcggat tggatgaaaa
    19981 aattcggttt cggagtgaaa accggtatcg atatttttga ggaatccgca ggggtaatgc
    20041 caacccgtga atggaaacaa aaacgctata aaaaaccttg ggtgcagggc gatactattc
    20101 cggttgggat tgggcagggc tactggattt cgaccccgtt acagttggcg aaagccacgg
    20161 cggtgttaat caacaacggg cgggtgaata caccgcattt aatgcttgaa gtgcaaagca
    20221 gtaattcggt tacgccgtat caagacccat tgttgtatga agatattaaa ggcgtgccgg
    20281 atgtctattg gaatttagca aaacagggaa tgtataacgt aaaccacgcc gcaaacggta
    20341 cggcacgaaa agtgtttgcc ggtgcatttt atcattcagc agggaaaacc ggtacggctc
    20401 aggtgtttaa cttaaacggt aaaaattacg ataaaaatgc gattaaaaaa gagttgcacg
    20461 accacgcttg gtttatcggc tatgctcctt atgaacaacc taaaatagtg gtggcattaa
    20521 ttttagaaaa tgcaggcggt ggtggtagtg ccgcggctcc tgttgctcgt cagattatgg
    20581 attatgcttt gagaaaaggc attggtgaac agccggattc gcaaaattct gagcaaaata
    20641 aaccgcttgt cacagaggaa catcatgaat agtggcttta aaaaactttt ctggaaaatt
    20701 ttttcactcg atctcctttt attatcagga ttattagcta ttaccggtta tggtttatta
    20761 gtactatata gcgcaagcgg tgcaaatgag cggatgttta ccagtagact gattcaagtt
    20821 tcgctagggc ttgggctaat gttgataatg gcaatggtac ctcctcgctt ttatcaaaaa
    20881 gtttcgcctt atctgtatat tttctgtctg atattattga ttttggtgga tttggtcggc
    20941 gaaaccagta aaggagcgca acgttggttg aatttaggat ttgttcgctt tcagccttct
    21001 gagattgcca agctcgctgt gccactgatg gtagccactt atttaggtaa gcggccgctt
    21061 cctccgagtt ttaaagatac ttttatcgcc ttagccatta ttattgtgcc aaccttattg
    21121 gtggcaattc agcccgattt gggaacatct attttagtgt gttctgccgg tatttttgtt
    21181 ttatttttgg cagggctaag ttggaaatta attggcgcag gtgtggtgtt tttagccggt
    21241 tttatcccga taatgtggtt tttcttaatg cacgattatc aaaaaacccg ggtgatgacc
    21301 ttaattgatc ctaataaaga cccgttgggt gccggctatc atattattca atccaaaatt
    21361 gcgataggct ctggtggcat taatggaaaa ggctggatgg aaggaacgca atcccagctt
    21421 gaatttttac ctgaaccgca taccgatttt atttttgcag tgttaagcga agagcatggt
    21481 atgataggtg tgctgatttt attagcgatt tatttgttta ttattgcccg aggtttagtg
    21541 attggcacaa aatcggattc tgctttcggg cgtatattat caggtggtac agcccttcta
    21601 ttttttgttt acgtttttgt aaatattggt atggtgagtg gtattttacc cgtagtcggt
    21661 gtaccattac cgcttttcag ttacggcgga acctcctatg tgacgctgat ggcggcattt
    21721 ggtttgatga tgtcaaccta tgttcaccgt aagcgtgtag gtagtaataa tccttatgat
    21781 aaactgaaat aaattaaact tttgcttttt tgcggtatca aaaagcagtg aaacgatcat
    21841 cgttacaaac aataacgaca tccacataga ggaaaaaact tatatgagat taggtaaaat
    21901 tgtaaccctg ttgttagctg gatttctgac atttagttca ttaaattctt tggctgcgac
    21961 aaagaataca aaagctaaat cgagtatttt agccaagaag caagcaactt ctaaagcaat
    22021 aaaaaaagta ggtatttcta aagttaagaa aaaagaagta gtggctaaag ctacaaaaaa
    22081 gaaaacaatt tctactgtta caactaagcc gattaaatct acaaaaaagc tggctcgcaa
    22141 ggttgtcaag aaaacggtaa ccgctaagaa aaaattggta aaaaagcagc ataagccact
    22201 ggtcaaaaaa catttccaga ctggtgttgc cagctattat gcaaattact ttaatggtcg
    22261 ccgaaccgct aatggggaga ctttcaataa cgcaaaaatg acggctgcac atcgaacttt
    22321 accatttggt actttaattg aagtgacgaa tttacgaaat ggtcgttctg tggtggtgcg
    22381 tgtaaatgat cgcggacctt atgctcacgc acgggtcttg gatttatcat cagccgcagc
    22441 gaaaaaaatc ggtatgcacc attcggggac ggcaagagtg aaaattgcga ttgttgataa
    22501 gtcaaaattg ggatcgacta atcagtttta tgtaatgaat taatttaaga gggaatatga
    22561 aaaaaacatt agtgaaagcg atgagcgtgg taggttttgc ggtttcaagc attgcctatg
    22621 cggatttaaa cactaacttc aatttatcgg caccccagat caacgcacaa acctatattt
    22681 tgatggatta caactccggt gaagttttag tgagcctaaa tccggatcaa cgtcaatatc
    22741 ctgcatcatt gaccaaaatg atgactagct acgtagttgg tgaagcccta aaatcgggaa
    22801 aagtgcaaaa cagtgatatg gtgatagtca ccgaaaattc gtgggcgcaa aaattccccg
    22861 gctcttcatt aatgttttta gatttaaaca gcaaagtttc agtaggtgag ttgatgaaag
    22921 ggctgattat cgtctcgggt aatgatgcct ctgtggcgct tgctgaacat gtttcaggct
    22981 cacaagcggc gttcattaat gaaatgaaca aatatgccca acagtttggc ttaaagaata
    23041 ctcactttac cactgttcac ggtttagatg accctgagca atattcttct gctcgtgata
    23101 tggcgattat tggttcgcat attattcgtg atcagccgga agagtataaa atttatgcgg
    23161 aaaaagagtt ccaatataac atcaaaaaac cacaaccaaa ccgcaacgga ttattgtggg
    23221 ataaaaccat tcaagttgat ggtatgaaaa cagggcatac tgataaagcc ggctataact
    23281 tagtcgcatc agcaattaac ccgaatacac gtttaatttc tgtagtgatg ggcgtgccaa
    23341 cttataaagg gcgtgaagtg gaaagtaaga aattactgca atggggcttt gcgaactttg
    23401 aaaccattaa atctattccg gcagctcaat cggtggcaga gcaaagtgtc tattacggtg
    23461 aagtcaataa agtacaatta ggctcggtgc aagatagctt tgtgactatc ccgaaaggtc
    23521 gctcggcaga tttaaaagcc cgttatgagt tagagaagaa aaacctcgaa gctcctttag
    23581 caaaagggca ggtagtgggt aaaatgatct accaacttga cggcaaagat gttgcaagca
    23641 ctaacttaca agtcttacaa gatgtaccgg aagccggtat tttcggcaaa gcgtgggatt
    23701 ggattgccct tactgtgaag agcttgttcg attaatcttg ttatttgcct ttttatcccc
    23761 atctagggag caatgcaagc ggtgtgattt tgcaaaaaat ttgcaaaatt tcaccgctta
    23821 ccgttttaga tatgaatgta taaaaagtgt agtggcgaaa aatttttcgc ccctcgaaga
    23881 aagaatagaa gaaggatcaa aaatgtctca acccaaagcg ataaacttac aagatttacc
    23941 tcaagccaaa ttaaaagatc tgctagagtt tccgtgccat ttcacgttca aagtggtggg
    24001 agcaaaccga gaagatttgg ttgatgatgt ggtagtggtc acgcaaaaat atgccaaagg
    24061 cgattacaat ccacgtcagc aaaaaagctc aaaaggtacc tataattccg tttcgattga
    24121 tattgtggcg gaaaatattg agcaagtaga aactctctac acggaacttg ccaaaattaa
    24181 tggcgtaaga atggtattat aatgcgaggg gcgaatgaca ttcgccctca atttttcaat
    24241 aaagcgatgt tggaaaatag aaaatgaaat taataattcg ccaactaggc attcagcctt
    24301 atgaagaaat ttggcaccaa atgcaatctt tcacagatag ccgtgatggg aataccgatg
    24361 atgagatctg gctggttcag cacccggctg tgtttacgca aggatcggca ggcaaaccgg
    24421 agcatttgtt aaatccaacc aatattccgg tggtgcaaag cgaccgtggc ggtcaaatta
    24481 cttaccacgg cgaggggcag caaattatgt atgtgctgat tgatatcaaa cggctgaaat
    24541 ccttgggtaa agaagtgtcg gttcgagatt tagtgactgc cctggagcaa accgtggtac
    24601 aaacgttggc agaatatggc atagaaagtt atccaaaagc cgatgcaccc ggggtgtatg
    24661 tggacggcaa gaaaatctgc tcacttggtt tacgaattcg aaaaggttgc tctttccacg
    24721 gtttggcatt aaatatcaat atggacttaa cgccttttca aaacatcaat ccgtgcggtt
    24781 atgcagggct ggaaatgtgc caattaagtg aactggttca tcgccctgat ttgcgttgcg
    24841 aagaggttgc tccaaaatta gtggctcatt tcagcacaat tttaggctat aataaccaac
    24901 aaattattaa caattaggat aaaacacagt aatggctaca tcgacagctc aaacgacggc
    24961 aactgctaca gtgaaaaaaa tgagcccttt caaaatggaa aaaggggtga aatatcgtga
    25021 tgccgccaaa acctctgtga ttcaggtgcg taatatcgac ccggatcaag aactcttaaa
    25081 aaaaccggag tggatgaaaa tcaaactgcc ggcaaattcg gcaaaaattg atagcattaa
    25141 aaacggtatg cgtcgccacg gcttgcactc ggtgtgcgag gaagcctctt gcccgaattt
    25201 acacgaatgt tttaaccacg gtactgcaac ctttatgatt atgggggcaa tctgtacccg
    25261 tcgttgcccg ttctgtgatg tggcacacgg caaaccgctt ccgcttgacc cggacgaacc
    25321 tcgcaaagtg gcagaaacgg tgcaagatat gaaactcaaa tatgtggtga ttacctcagt
    25381 ggatcgtgat gatttgcccg accgtggtgc ggctcatttc tctgcgaccg tgcgtgaaat
    25441 caaagcctta aatccgcatt gtaaggttga aattttagtg cctgatttcc gtggacgtgt
    25501 ggagcaagcg gtggcaattc tcaaagaaaa tccacctgat gtctttaacc acaacctaga
    25561 aaatgtgcca cgtctctatc gtgaagttcg tccgggagcg gattacaaat ggtcgttgga
    25621 attattgaaa atcttcaagc aagagttccc gcatattccg accaaatccg gcttaatggt
    25681 aggcttaggt gaaaccaacg aagaaatctt ggaagtaatg caagatttac gagaccacgg
    25741 cgtgacgatg ctcaccatcg ggcaatactt acaaccaagc cgccaccact taaaagtgga
    25801 acgttatgtg ccaccggcag agtttgatat gttccgtgag gaagctgaaa aaatgggctt
    25861 tgaacacgca gcctgcggac cgttcgtgcg ttcttcttac cacgcggatt tacaagcgaa
    25921 aggcgaattg gtgaaataaa atcgataagg gcgaatatta tttgcccttt gtttttgtgg
    25981 tttgcaaagt tttagcaaaa ttaaaccgct tgtaatctct tctaatttac tcttctatag
    26041 ataatttcgt tgttgcgaat tattttcatt gactatttgt tatagaaagt tacaattcaa
    26101 ctttccattt ctttttggag ttccaatgaa aaaattacta ttaaacagcg tatttgctgc
    26161 cacattgctt gcttttggtg caactgccaa tgccgaaatt aaaaccatca ctgatgtatt
    26221 agggcgtgag gtcaaagttg atgtgcctgc taaacgtgtt gcactgactt tctattaccc
    26281 tgactatatt gcggtaaccg gtgttgaaaa tttcgataag gtagtaggga tttcacgaga
    26341 gttttgggaa aagttcaacc caggcagttg ggcattattt gcagaaaaaa tgccaaatct
    26401 aaaaaacatt gccgatcttg gctatgtgaa tagtggtact ttttcaacag aaaaaaccat
    26461 cgcattaaaa ccagatgtgt tagtgctacc tgaaattcaa tatcaagcgt tagccagtga
    26521 aatttcacgc attgagcaag ctggcattcc tgttgtagta gatttcaaca agcaaactat
    26581 tgaaaaccat acaaaaagcg tgagagtttt cggtcagctt acaggcactg aagagagagc
    26641 ggagaaaatt gccaaagagt atgaagaggg cattgctgat attcagagct gtattgataa
    26701 tgcaaaagta agtaagccga aaatctatgc tgaatttggt aataaaggcc cgaaagagca
    26761 tagttttacc tttggtaaaa atatgtgggg agcgattgcc gaaacggtgc gaggcgataa
    26821 cattagtgcc ccgtttgtag aaaactgggg gcagattaac cctgagcagg tgttagtttc
    26881 taaacctgat gtgattatga tttcaggtac ggaactaggc aacgacacta accctgagat
    26941 tatgtcgatg gggattaata ttgaagaagc cgatgctcaa aaacgcttaa aaggctttat
    27001 tgagcgtaca ggttggaaag agttacctgc ggtaaaatca gggcgtgttt atggtttata
    27061 tcatacagct tctcgctcaa tttcagattt agcgagtgct caatttatgg caaaagcact
    27121 ttatcctgaa ttgtttaaag atatcgatcc tgaaaaaacg tatttggatt tccacaacaa
    27181 ctacttacca attacgccaa aaggcacatt ctttatgcaa ctgaaataaa aataacaagc
    27241 ggtcattttg cagatttatt ttgcaaaatg accgcttgta ttcgctttta ctatttgcgg
    27301 ttcaaacagc aatcaatatt taaacatttg cgaagcgggc ggataatcgg cgagccgttt
    27361 ccatcatata aaatctcaat attgacatta tagagtctct gaataatatc gcattccaac
    27421 atatcacaag ctctgccttg tgcttgaatt tcccctcgct taatagcatc acactatccg
    27481 aaaattgagc cgcaaggctt aaatcgtgca gcaccataat tgtaattagg ttattcgctc
    27541 gagtgtaggc attcacatat tcaagtaagt tgatttgatg atacatatcc aacgcactga
    27601 caggctcatc tagcagcaga atgtgtggtt tacgtagcaa tacttgtgcg aacattacca
    27661 tttgccgttg cccgccactt agccgcataa tatcttgatg agctagatgt gaaataccga
    27721 gtttatccat aatatcaacg gcttcattga gtaattcatc gctaatatac atattcaggc
    27781 tatcaagttg ccctaataaa ataacctcta aggcactgag tgaggcctct acctgtgtgt
    27841 cttgtggcat atagccaatt tctttacgcc aactatgcaa gtggcttgag gttaatttat
    27901 taccgtcaaa atcaattgtg ccttgatgag caatttcccc aaatagagtt ttaaggagag
    27961 aagatttacc cgcaccattt gggccaagta aagtatagat cttgccttgt tcaaaatgta
    28021 gattgatttt atcagccacc actaa
//
LOCUS       DANLTI010000015        27358 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.015, whole genome shotgun sequence.
ACCESSION   DANLTI010000015 DANLTI010000000
VERSION     DANLTI010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27358
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.015"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(196..378)
                     /locus_tag="PXB09_000548"
     CDS             complement(196..378)
                     /locus_tag="PXB09_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232696.1"
                     /translation="MYQFGYLRTKIGTDTQRAMLWNCPTYVLIIPFLLNTSVKKQYHA
                     FWQKYHQHNNDVSFPY"
     gene            528..1568
                     /gene="selD"
                     /locus_tag="PXB09_000549"
     CDS             528..1568
                     /gene="selD"
                     /locus_tag="PXB09_000549"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020909986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:573..575,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDL5232697.1"
                     /translation="MSEPIKLTQFSHGAGUGCKISPKVLGTILQTQLEQFVDPNLLVG
                     NETADDAAVYDLGNGQAIISTTDFFMPIVDAPFDFGRIAAANAISDIYAMGGKPIMAI
                     AILGFPVNKLPAEVAQQIVEGGRFACQQAGIALAGGHSIDSPDPIFGLAVTGIVPTER
                     VKRNASAVAGCELFLTKPLGIGILTTAEKKGLLKPEHQHLASEVMCQINLIGSAFSEL
                     PEVTAMTDVTGFGLLGHLSEVCQGSGLRAEVDFEDIQVLDGTKEYIALGAVPGGTNRN
                     FDSYGHLISAMTDEQKAILCDPQTSGGLLVAVLPQAVEKVQQIANRANVPLFHVGRLL
                     EMEQGKPRIEVI"
     gene            1568..2041
                     /locus_tag="PXB09_000550"
     CDS             1568..2041
                     /locus_tag="PXB09_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDL5232698.1"
                     /translation="MFKPNVTMACVVHCKGKFLFVEEIEYGKRTLNQPAGHLEKDETL
                     LEGASRELFEETGIRAEMANLVKIYQWQAPRSQTDFLRFLFSVELEEWLEPNPQDADI
                     TQALWLTLAEFEDYIQQQGQCARSPLVVQSVKDYLSGERYPLSLLNAFEWARNGK"
     gene            2031..3239
                     /gene="ubiH"
                     /locus_tag="PXB09_000551"
                     /gene_synonym="visB"
     CDS             2031..3239
                     /gene="ubiH"
                     /locus_tag="PXB09_000551"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDL5232699.1"
                     /translation="MENKTTTQFDVVIVGGAVTGSVLALALSSFTHHKISIAIVEKSL
                     PDYEQQGGFDARSIALAEGSLQKMGQIRPLAGSSLGEMISEIGTPIQQIQVADKGHFG
                     KTTLKASEQNVAQLGMVVELAKFGRKLTACLAQQANITLFCPNQVVGIERSQQHCGLS
                     LKNGEKLSCSLLVAADGIQSQIAKQCGVETVKVRDYAQSAIIANVELSESHQNQAFEY
                     FTPQGPFALLPLSGNMMSLVWCVKEPNELIQLSDSEFLARLQQQFGWKLGQFVRVSKR
                     FVYPLILQKAQSHIHHRLAVVGNAAQMLHPVAGQGFNLGLRDLTTLAELVALAFNQGK
                     DIGEFSLLSTFENERTQDQARMINATSGLISLFCCEMLPVQVVRNLGLLTVSHSKIAR
                     DFVANQALGW"
     gene            3502..4734
                     /locus_tag="PXB09_000552"
     CDS             3502..4734
                     /locus_tag="PXB09_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDL5232700.1"
                     /translation="MTTENMSTPKQAFIGLQMLFVAFGALVLVPLITGLDPNVALLTA
                     GVGTLIFQICTKRQVPVFLASSFAFIAPIQFGVQQWGIPVTMGALLCSGFIYMALSAL
                     VKAKGVNILHKYFPPIVIGPVIMVIGLGLAPVAVDMATGKSANIAYNTAIIVSMITLV
                     TTLIVAVFAKGLLKLVPILAGLTVGYILSVFMGLVDFTKVVEAPWFSLPKVSAPEFKL
                     DAILYLLPIALAPAVEHLGDVMAISQVAGKDFMKKPGLHRTLLGDGLATSAAAALGGP
                     PNTTYSEVTGAVMLTKNFNPKIMTWAACWAIAFSFCGKIGAFLATIPTFVMGGIMMLL
                     FGAVAVVGINTLIKAKVDLSIPRNLCIASVVMTFGIGGMLINIGEFSLKGISLCALVA
                     IVLNIVLPKEKVEDSAAH"
     gene            4801..5787
                     /locus_tag="PXB09_000553"
     CDS             4801..5787
                     /locus_tag="PXB09_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5232701.1"
                     /translation="MQKLTFSPPLLNTPCPWCSELESLRELYACEYTGAVTTRTSMPQ
                     PYPHDWAKNQYVLFDSNAQKTASVNTQDATSLQTASLNTIGLSPNNLDTTISFVRTIS
                     NELTAPSSKPFIISVFGSPEEVGECYEKIVAFQTEVKMPLAMEINISCPNIPGEISPA
                     YSAEELSHYLHALQTSLKKLAQGDNTLPIGIKIPPFTYQNQYDELIKGLLQAVENGEN
                     LPISFITSTNTLGSSLVLNAGKAVLNSEVGTGVGGMAGTAIHALSLGNVYTIRQMLDQ
                     EPKLKHLQIIGVGGVNDKAGFERMKSVGADFVGLATALGVKGIGVFKEILSE"
     gene            complement(5828..6238)
                     /locus_tag="PXB09_000554"
     CDS             complement(5828..6238)
                     /locus_tag="PXB09_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HDL5232702.1"
                     /translation="MLYSVLTAHILLNEPYRNGAHSTQHEHLVVMFEIDEESGYFYAM
                     DLHQTEQPVVDSLFVFRVSDIEQNSLKEPRRLEICWSEDGYQAFLLINGYPHAVFDFR
                     QFVGYNHTKFPMPELGSMWVHKETTNELVEKWLG"
     gene            complement(6304..7614)
                     /gene="eno"
                     /locus_tag="PXB09_000555"
     CDS             complement(6304..7614)
                     /gene="eno"
                     /locus_tag="PXB09_000555"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDL5232703.1"
                     /translation="MAKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTG
                     SREALELRDGDKGRFLGKGVLKAVSAVNNEIANALVGKDGSAQAEIDQIMIDLDGTEN
                     KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHA
                     DNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKVLKAKGLNTAVGDEGGFAPNLAS
                     NADALACIKEAVEKAGYVLGKDVTLAMDCASSEFYDKERNVYDMKGEGKTFTSQEFTH
                     YLEGLCKEYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKNGIEK
                     GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ
                     IKTGSMSRSDRVAKYNQLIRIEEALERAGTPAPFNGRKEIKGQA"
     gene            complement(7805..8983)
                     /gene="rlmC"
                     /locus_tag="PXB09_000556"
     CDS             complement(7805..8983)
                     /gene="rlmC"
                     /locus_tag="PXB09_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDL5232704.1"
                     /translation="MSSLLHCSHFERGDCTSCQWIEKPYSTQLAAKEADLKRLILPFI
                     LQNKTEILPLVGSPISQFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCLLYPS
                     SFHRLFPILKDFIARAGLVPYNISKKKGELKYILITESQYNQSFMLRFVVRSEAKRAL
                     VERELPELLEKLPPNSVVSLNIQPQHAALLEGETEIFLTEQKVLEEHFNGIPLFIRPQ
                     GFFQTNPVVASQLYHTAQSWIEHLPIAKLWDLFCGVGGFGLHCANALQAKNSNVELTG
                     IEISASAIASATKSAEKLGLKQVKFASLDSAQFALNEAGSPPDLVIVNPPRRGIGKLL
                     AEFLNQLGSPYLIYSSCNAVSMANDFTFLTNYELHKVQLFDMFAHTAHYETLTFLVKK
                     "
     gene            complement(8976..10013)
                     /gene="nagZ"
                     /locus_tag="PXB09_000557"
     CDS             complement(8976..10013)
                     /gene="nagZ"
                     /locus_tag="PXB09_000557"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDL5232705.1"
                     /translation="MLLIDIKDKELTQEEVEMLEHPLVSGLILFTRNFYDKAQIQALV
                     KSIRQRVKKPLLITVDQEGGRVQRFREGFTKLPAMQSFNQLATTPEQAMQLAKETGWL
                     MAAEMFALDIDLSFAPVLDLGHECKAIGDRSFGQEPAAILPVAEAFIDGMREIGMATT
                     GKHFPGHGHVLADSHLETPFDDRPKERIFNHDILPFKQLIAKGKLSAIMPAHVVYTQC
                     DSQPASGSSYWLKEVLRKQLNFNGVIFSDDLGMKGAGFMGNFVERSEKAIQAGCDLLL
                     LCNEPEGLVQVLDGLKYQPTQAQKERRLSLMKRKTVTWRELENSSRYQQTQAELTALQ
                     NNWLEWKEANV"
     gene            complement(10139..10870)
                     /locus_tag="PXB09_000558"
     CDS             complement(10139..10870)
                     /locus_tag="PXB09_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDL5232706.1"
                     /translation="MFDWITNPEAWVALFTLTGLEIVLGIDNIIVISILVSRLPIEQR
                     QSARIIGLGLAMGTRILLLLSLAWMMRLVEPLFTIGNNPISGRDLILLIGGLFLIVKS
                     AMELKESISAESHEEKSESIKKASFFMVLIQIAIFDIIFSLDSVITAVAMADDIPVMV
                     IAIIIAVAVMMLAAKTIGDFVDNNPTIKNLALAFLILIGIVLVGEGFDIHIPKAAVYT
                     AMGFSVVVEMLNIKMRRNQAKLEQA"
     gene            complement(10959..11639)
                     /gene="mutH"
                     /locus_tag="PXB09_000559"
     CDS             complement(10959..11639)
                     /gene="mutH"
                     /locus_tag="PXB09_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDL5232707.1"
                     /translation="MQLSTFSPTEQALLSKAEWLAGFTLGEIAEMLHIPIPADLKRDK
                     GWVGTLIETALGAKAGSKAEQDFAHLGIELKTIPVNQKGLPLETTFVSLAPLTQNNGI
                     IWETSHVKHKLSRVLWIPVEGERKIPLAERHIGQPILWSPTITQESRLQQDWEELMEL
                     IVLGELHKINATLGEVLQLRPKGRNNRSITSAINAKGEIVQSLPLGFYLRKHFTAEIL
                     QNFLHCPL"
     gene            complement(11731..12366)
                     /gene="lexA"
                     /locus_tag="PXB09_000560"
     CDS             complement(11731..12366)
                     /gene="lexA"
                     /locus_tag="PXB09_000560"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDL5232708.1"
                     /translation="MRKHLTARQQEIFDFVKNHIETTGMPPTRVEIAREIGFKSPNAA
                     EEHLKALARKGYIEMLSGTSRGIRILVEDENQAANDEDEGLPLIGKVAAGTPILAVEH
                     VENHYPVNGAMFNPSADYLLKVNGNSMEKIGILDGDLLAVHKTNTARNGQVVVARVND
                     EVTVKRLEKKGELIYLHPENDELKPIVVNPAQEYIEIEGIAVGVIRSNAWM"
     gene            12533..14968
                     /gene="plsB"
                     /locus_tag="PXB09_000561"
     CDS             12533..14968
                     /gene="plsB"
                     /locus_tag="PXB09_000561"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDL5232709.1"
                     /translation="MSGLLNFYRAFLNLPLSLLVKSRSIPTHPVAELELNLEQPIVYV
                     LPYTSQTDLLILQKNCLALNLPDPLQENVIEGQTLLRFVFLDEGRRFFKSKGAKSETE
                     SIFYRYLDLHRANAELDVQLVPVSVLWGRAPGKEDARHLQVLTSFQRFLSMVWFGRDN
                     FVRFSPAVSLRYMVTEYGADEKIAQKIARVAKMHFAKLRYSAMGPRLPNRDAMFNKIL
                     NSEVIQAAIAEEAKKSSPEKARKEAEKIINEIAADVKHESLRVADRVLSWLWNKLYQG
                     INVQNADRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFWP
                     AGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEP
                     KTGMMSMSLQALQRGLNRSLSIVPVYIGYEHVLEVDTYAKELRGAAKEKENAGLVLRV
                     LKKLKNLGQGYVNFGEPILVNNYLNQYFPEWKEPSEDGRPKWLNEAVDNISHQVMVNI
                     NKAAAVNAKNLVGSALLASRQRALTREQLIEQLGSYIQLFRNVPYSKDMTLPTESAEV
                     MLNHVIHLPRSGVLIEKDNFGELVRLERESAVLMTYYRNNVQHLFVLPSLVASMVLHH
                     EAVSKDVVIKSVNRIYPFLQAELFLHFKQEELKAHIEAIIAELSRQGVIKNESDMLMI
                     NRSHIRTLQLHSAGVREILQRYYISLSVLLEQPNISRGYLEKESSSIAQRLSVLHGIN
                     APEFFDKAIFSTFTSSLKAQGYFDGDDNLAIAKVKETESLLRSLISIEVQQTIQGAMA
                     KVAESVENPNIAG"
     gene            complement(15073..15636)
                     /locus_tag="PXB09_000562"
     CDS             complement(15073..15636)
                     /locus_tag="PXB09_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDL5232710.1"
                     /translation="MSAPNSGTNPAPLGLCGFALTTFLLSLINNGTFSGENVGLVLAM
                     GFAFGGTSQMIAGMFEFAKGNTFGFTAFTSYGAFWWSFALFKVFFAANVSAEFVGWYL
                     VAWGTFTLMMFIGTLAKARALQAIFLSLTITFYLLAAGDFTHNTTLTNIGGNFGLLTA
                     FLAFYLAAADIINESFGKTVLPIGEPK"
     gene            complement(15834..16730)
                     /locus_tag="PXB09_000563"
     CDS             complement(15834..16730)
                     /locus_tag="PXB09_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5232711.1"
                     /translation="MDILDRLLAFAQISAGISVKCQLQGDWQLENPHQTGQAIAHIIS
                     YGQAYLQHNGKTHHLKQGDIVFFPRFADHTLRSQIQPLTSKNAVNPEQLGAFTLTQAG
                     LSQSECDMFCLHFYYDHQAELMESLPEMIVFQVAETPLKAMLDILKQEAETPNLAVKS
                     VVNSLAVVILTMILREHLVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDDMA
                     AFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES
                     HFITAFKKQYCVTPSQYRQLNP"
     gene            16866..17207
                     /locus_tag="PXB09_000564"
     CDS             16866..17207
                     /locus_tag="PXB09_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5232712.1"
                     /translation="MSSFQNWTEHTAHVKQSFGKLGQKHPKMLEAYKALGTAAAAEAL
                     DHKTRELIALAVAITTRCESCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYA
                     LRALEAVEEQK"
     gene            17218..17571
                     /locus_tag="PXB09_000565"
     CDS             17218..17571
                     /locus_tag="PXB09_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5232713.1"
                     /translation="MKKLAWILGFAAMMPMMSSAKQASVQQVQAEKAAGIWIDVRSAE
                     EFQQGHLNGAINVTHTEIAQRIAEVAPDKNQPIHLYCRSGHRAEAALNELKKLGYSNV
                     TNHGGYDDLIKAGLK"
     gene            17631..18269
                     /locus_tag="PXB09_000566"
     CDS             17631..18269
                     /locus_tag="PXB09_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HDL5232714.1"
                     /translation="MSAFNNFVNFVANIVAPMQRQFINFVRIAICIVMVWIGGLKVCQ
                     YEADGIAHFVSNSPFFSYMYKKGPNLVDDGTGKMVMEYTLHKNPEGKMVAKNIEWHKE
                     NGTYTASYIIGATIVTVGLLTLSGIWFPVSGMAGGLLTFGMSIVTLSFMITTPEIWVP
                     NLGGDMPTPAHGFPYLSAVGRLIVKDVIMMAGGLVAAAECANRILARRKAIA"
     gene            18404..19585
                     /gene="purT"
                     /locus_tag="PXB09_000567"
     CDS             18404..19585
                     /gene="purT"
                     /locus_tag="PXB09_000567"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDL5232715.1"
                     /translation="MTTIGTPLRTNATKVMMLGSGELGKEVVIELQRLGVEVIAVDRY
                     DNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATATLVELEQEGYNVI
                     PTAKATQLTMNREGIRRLAAEELGLKTSPYRFVDNFEQFQQAIQEIGIPCVVKPIMSS
                     SGHGQSVIKSEADIQQAWDYSQQGGRAGGGRVIVEGFIKFDYEITQLTVRHIHGTSFL
                     APIGHIQVDGDYRESWQPQQMSDIALKKAQETAEKITSALGGRGIFGVELFVCGDEII
                     FNEVSPRPHDTGIVTMASQELSQFALHARAILGLPIPEIYRISPAASKAIVVEGKSDN
                     VRFGGVDKVLAEIGTNIRLFGKGEVNGHRRLGVILARDENTVRALEKARRAYDKLDIQ
                     L"
     gene            complement(19677..21170)
                     /locus_tag="PXB09_000568"
     CDS             complement(19677..21170)
                     /locus_tag="PXB09_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5232716.1"
                     /translation="MFKQLQQVGKAFMLPIAILPAAGLLLGIGGALSNKATVQAYPIL
                     DNPTLQGIFQIMASAGSVVFGNLALLLCIGLGIGLAKRDKGVAALAAVVGYLIMTGTI
                     SALIPLFPPETKGIDTGVIGSLVMGLITVKLHNKYHNIQLPQILGFFGGSRFVPIVTA
                     FAAIFVGAVFFLIWPAFQQWLVSAGQGIAEMGEIGTFFYGFLMRLSGAVGLHHMIYPL
                     FWYTELGGTEVVNGETIIGAQKIFFAQLADPTHQGLFTEGTRFFAGRFDTMMFGLPAA
                     CLAMYHAVPKARRGAISGLFLGAALTSFITGITEPIEFMFLFVAPWLYVFHAFLDGVS
                     FYIADLLNISIGNTFSGGVIDFTLFGILQGNENTNWLRVIIVGLPWAALYYFSFLFLI
                     KKFNVMTPGRAEESEEVVEQQTSSLTENAHKIIAALGSANNIENVDACITRLRVAVKE
                     VKAVDKATLKKLGAIDVLEVGGGVQAVFGAKAVLYKSEVNQILGKED"
     gene            21371..23218
                     /gene="ilvD"
                     /locus_tag="PXB09_000569"
     CDS             21371..23218
                     /gene="ilvD"
                     /locus_tag="PXB09_000569"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012055207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDL5232717.1"
                     /translation="MPILRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFT
                     QFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI
                     RLDLVDAMIESADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGN
                     GSMLATHADRKELFLRAGREIVELCRKYYQQDDESVLPRSIATFDAFENAMSLDIAMG
                     GSSNTVLHLLATAQEAGVDFKMEDIDRLSRVVPCLSKIAPNTNKYHMEDVHRAGGIMG
                     LLGELDRAGLIHRHVKTVLGLTIEEQLNQYDIIRNKDEDLHKFFRAGPAGIRTTKAFS
                     QDCRWDTVDDDRVNGCIRNVENAVTKEGGLAVLFGNIAEDGCIVKTAGVDESIWKFTG
                     TAIVFESQEDAVAGILGGKVKEGHIVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKKC
                     ALLTDGRFSGGTSGLSIGHASPEAASGGAIALINDGDTVAIDIPNRSINLMVSDEELA
                     ARRAEMEARGDKAWQPLKREREVSFALKVFGHFATSADKGAVRDKSLLK"
     gene            complement(23352..23702)
                     /locus_tag="PXB09_000570"
     CDS             complement(23352..23702)
                     /locus_tag="PXB09_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HDL5232718.1"
                     /translation="MWHFYLMTIELNNIQYPTDASGYLTNLNDWSVELAEKIAEKEQI
                     SLTAEHWEIIYLVRDFYQEYKTSPAIRMLVKTMAQKFGEEKGNSRYLQRLFPDGPAKQ
                     ATKIAGLPKPAKCL"
     gene            complement(23731..24396)
                     /locus_tag="PXB09_000571"
     CDS             complement(23731..24396)
                     /locus_tag="PXB09_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor protein"
                     /protein_id="HDL5232719.1"
                     /translation="MENRLAHSYSTGESLISTHKVLRNTYMLLAMTLTFSAVVAFVAI
                     QMNAPAMPWWGLLVGFYGLLFLTNATSNSSAGILSVFALTGFLGYTLGPILNRYIGAG
                     LGDIVALAFGATALVFFACSAYVLTTKKDMSFISGMMVALFVVLLVGIIANIFLAIPA
                     LSLALSSLFVIFSSGAILLATSNIIHGGETNYIRATVDLYVSIYNLFVSFLQIFGVLG
                     SDD"
     gene            24602..25150
                     /gene="pgsA"
                     /locus_tag="PXB09_000572"
     CDS             24602..25150
                     /gene="pgsA"
                     /locus_tag="PXB09_000572"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDL5232720.1"
                     /translation="MKLNFPTYLTLFRVGLTPLFIVAFYLPTKYAPEISTLIFFIASI
                     TDAFDGYLARKWNQTTRLGAFLDPVADKVLVAVAFVCVAEYYHTWWITIPICIMIARE
                     IIISALREWMAELGERASVAVSIWGKVKTTAQMLALGGMLWRQNQLMEILAFILLYIA
                     VGLTIWSMMQYLNASKNSLLKS"
     gene            25228..27066
                     /gene="uvrC"
                     /locus_tag="PXB09_000573"
     CDS             25228..27066
                     /gene="uvrC"
                     /locus_tag="PXB09_000573"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDL5232721.1"
                     /translation="MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLAS
                     YFRSQLSSKKTEALVANLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYP
                     YILLTKHKHPRLTAFRGSKKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKN
                     RSRPCLQYQIGRCLAPCVEGCYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAE
                     ALDFEGAARFRDQIQSVRAVQEKQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKV
                     LGNRSYFPKVPSNTDLTELADTFVGQFYLQMNQHRTIPNQIVIDHQLSESKALSEILS
                     EQAGHKVSILDNAIRGDKQRYLALARTNAMAALVLQLKQESHIQSRYQALKEMLKMSE
                     IKRMECFDISHTMGNQTVASCVVFDENGPLKSDYRRFNIEGITGGDDYAAMEQALLKR
                     YNRELPPEKIPDIIFIDGGKGQLNRALDVFAKLDVEWDKSKPLLIGVAKGVERKAGLE
                     TLIISKWDKEIHLPPDSLALHLIQHIRDESHQHAISGHRKKRQKAFTESGLESIAGVG
                     AKRRQALLKYLGGMQGVKSATLEEIQSVPGISKALAEVIFDTLKNS"
     gene            complement(27071..27346)
                     /locus_tag="PXB09_000574"
     CDS             complement(27071..27346)
                     /locus_tag="PXB09_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232722.1"
                     /translation="MKKLILLGLSVALTACSTPQQQSTVPMDMQAVQDYHQRVINKQT
                     VDKNTKQHDEPLNQSDKRSESINLPIHPIIYPSIGVGYHYGWKRYRY"
BASE COUNT         7876 a         5334 c         6129 g         8019 t
ORIGIN      
        1 gactgtcaga tcaagtctga tcttctacaa ctaagccttc tcagaataaa taaattttca
       61 caagcggtgc aactttgcaa aaacttcggt attatgtagc agttgcacaa aaccccaaat
      121 tcattaaaac cgcttaaaaa tgaaatgccc taaactgatt tttcagtcta gggcatttat
      181 tatcacatat tatggttaat agggaaaact cacatcattg ttatgctggt gatatttttg
      241 ccaaaatgcg tgatattgtt ttttcaccga tgtgtttaat aaaaacggga ttatcaagac
      301 ataggtcggg caattccata gcattgcacg ttgtgtatcc gtgccgattt tggtgcgtaa
      361 gtaaccaaac tgatacatta gacccaatcc aaccgtcacc tattctaata gcataataac
      421 taaggtcgca tcattaaatt aaaagctcat tttttgcaaa aaatttccca aattccaccg
      481 cttgttggcg tacaataggc ataattttga tttacgatgg aggcagaatg tctgaaccga
      541 taaaacttac gcagttcagc cacggggcgg gttgaggctg taaaatttcg cctaaggtgt
      601 tagggacaat tttacaaact caattagaac aatttgtcga tccgaattta ttggtaggca
      661 atgaaacggc ggacgatgct gccgtctatg atttagggaa cgggcaggcc attatcagca
      721 ccaccgattt ctttatgccg attgtggacg ccccgtttga tttcgggcga attgctgctg
      781 ccaatgcgat tagcgatatt tatgcgatgg gtggcaagcc gattatggcg attgcgattc
      841 tgggctttcc ggtgaataaa ttgccggctg aagtggctca acaaattgtc gaaggtgggc
      901 gttttgcgtg ccagcaagcc ggtattgcct tggcgggcgg gcattcgatt gattcgcccg
      961 atccgatttt cggcttggct gttaccggca ttgtgccgac cgaacgggtg aaacgcaatg
     1021 cctctgcggt ggctgggtgt gagctgtttt taaccaagcc tttggggatt ggcattctaa
     1081 ccacggcaga gaaaaaaggt ttgttgaagc ctgaacatca acatctggca agcgaggtaa
     1141 tgtgccaaat caacttgatt ggttcagcgt tttccgaact gcctgaagtc acggcaatga
     1201 ctgatgtaac cggttttggc ttactcgggc atttaagcga ggtgtgtcaa ggctcgggct
     1261 tacgggcgga ggttgatttt gaggatattc aagtccttga tggcactaag gagtatattg
     1321 cattgggagc agttccgggt gggacaaatc gcaatttcga cagctatggg catttgattt
     1381 cggcaatgac ggacgagcaa aaagcgattt tgtgcgatcc gcaaacctct ggcggtttat
     1441 tagtggcggt gctgccacaa gcggtcgaaa aagtgcaaca aattgcaaat cgggcaaatg
     1501 tgccgttatt ccacgttggc agattgctgg aaatggaaca gggcaaacca cggattgagg
     1561 taatttgatg tttaaaccaa atgtaacaat ggcttgcgtg gtgcattgta agggaaagtt
     1621 tctgtttgtg gaagaaattg aatatggcaa acgtaccctt aaccagccgg cagggcattt
     1681 agaaaaagat gaaaccttgc tggagggggc aagccgtgag ctgtttgagg aaaccggtat
     1741 tcgggcagaa atggcaaatt tggtgaaaat ttatcaatgg caagcccctc gttcacaaac
     1801 cgatttcttg cgttttctgt tttcggtgga actggaagag tggctggagc cgaatccgca
     1861 agatgcggat attacccaag ccctttggct tactttagca gaatttgaag actacattca
     1921 gcaacaaggg caatgtgcca gaagcccgtt ggtggttcaa tcggtcaaag attatttaag
     1981 cggtgagcgt tatccattaa gtttgttgaa tgcgtttgaa tgggcgagaa atggaaaata
     2041 aaacaacaac ccaatttgat gtggtgattg tgggcggggc agtgaccggc tcggtgctgg
     2101 cattggcgtt aagtagtttt actcatcaca aaatctcgat tgcgatagtg gaaaaatcgc
     2161 tgccggacta tgaacagcaa ggcggttttg atgctcgcag tattgcctta gccgaaggca
     2221 gtttgcaaaa aatggggcaa atcagaccgc ttgcaggctc aagtttaggc gagatgatta
     2281 gcgaaatcgg cacgccgatt cagcaaattc aagtagcgga taaagggcat tttggtaaaa
     2341 cgaccttgaa agcaagcgag cagaatgtgg ctcaactggg tatggtggtg gaacttgcaa
     2401 aattcggcag aaaattgacc gcttgtcttg cacagcaagc taatattacg cttttttgcc
     2461 cgaatcaagt ggttggcatt gagcgttccc aacaacattg tggattgagc ttgaaaaatg
     2521 gtgagaaact aagctgttcc ttgctggtgg cggcagatgg tattcaatct cagattgcaa
     2581 aacagtgcgg tgtggaaacc gtaaaagtaa gggattatgc acaatcggca attatcgcca
     2641 atgtggaact gagtgaatct caccaaaatc aagcctttga atattttacg cctcaaggcc
     2701 cttttgcttt attgcctttg agcggaaata tgatgtcgtt ggtgtggtgt gtgaaagagc
     2761 cgaacgagtt aatccaactt tcagacagtg aatttttagc ccgtttgcaa caacaatttg
     2821 gttggaagtt agggcaattt gttcgagtga gcaagcggtt tgtttatccg ctcattttgc
     2881 aaaaagccca gtcgcatatt caccaccgct tagcagttgt cggcaatgcc gcacaaatgc
     2941 ttcacccggt tgctgggcaa ggtttcaact taggcttgcg tgatttgact accttagcgg
     3001 aattagtggc tttggcgttt aatcaaggga aagatatagg cgaattttcg ctcttatcaa
     3061 cttttgagaa tgagagaacg caagatcaag ccagaatgat aaatgctaca agcggtctga
     3121 tttcgctttt ttgttgcgaa atgttaccag ttcaggttgt gaggaattta gggttattaa
     3181 cggtttccca ttcaaaaata gccagagatt ttgttgctaa tcaggcatta ggttggtaaa
     3241 aaacacaaaa gcagcaattt tctatttgac actgttttta aaaaggcgta ttatccaacc
     3301 cgtttaaaaa tctcaccaaa gccttgaatg caaattcaag gctttttcct ttttagtgaa
     3361 agcctatgaa ttttgtttgc cgtaaaatcg gcaaaaaaat tttgcctaaa attcgcaatc
     3421 gtttgcgaaa taggtttata gcgttgtttt catctgggta actgcaatgg ttacatcgca
     3481 atacatcaaa gagagtaaaa aatgaccaca gaaaatatga gtacgccaaa gcaggcgttt
     3541 atcgggctgc aaatgctgtt tgttgcattt ggggcgttag tattagttcc gctgattacc
     3601 ggtttagatc ctaatgttgc ccttcttacc gccggtgtcg gtacgttaat cttccaaatt
     3661 tgtactaaac gtcaagttcc tgttttcctc gcatcgagtt tcgcttttat cgctccaatc
     3721 caattcggtg ttcaacaatg gggaattccc gtcacaatgg gagcattgct ctgttccggt
     3781 tttatttata tggcattatc tgctttagtg aaagcgaaag gggtgaatat tctgcataaa
     3841 tacttccctc caatcgtgat tggaccggta attatggtga ttggtttagg tcttgctcct
     3901 gttgcggtgg atatggcaac gggtaaatcg gcgaatattg cctataacac cgctattatt
     3961 gtttcaatga taacgctggt aactacgctg attgtggcgg tgtttgcgaa agggctatta
     4021 aagctcgtgc caatattagc aggtttaacg gtgggatata tcttgtctgt ttttatggga
     4081 ttggtggatt ttactaaagt ggttgaagct ccttggttta gtctaccgaa agtttccgca
     4141 ccggaattca aattagatgc aatcttgtat ttattaccta tcgcacttgc tccggcagtc
     4201 gaacacttag gcgatgtaat ggcaatcagc caagttgccg gtaaagattt tatgaaaaaa
     4261 ccggggttac accgcacgct tttaggtgat ggtttagcaa cttcagcagc tgcggcatta
     4321 ggtggcccac caaatacgac ttactctgaa gtaaccggtg cggtaatgct aaccaaaaac
     4381 ttcaatccga aaattatgac ttgggctgcg tgctgggcta tcgctttctc attctgcgga
     4441 aaaatcgggg cattccttgc cactatccct acttttgtga tgggcggtat tatgatgttg
     4501 ctgttcggtg cagttgcggt tgtggggatc aatactctaa ttaaagctaa agttgattta
     4561 agcattccac gtaatctttg tattgcttct gtagtaatga cattcggtat tggcggtatg
     4621 ttaattaaca tcggcgaatt ctcattaaaa gggatcagct tgtgtgcatt agtcgctatt
     4681 gtacttaaca ttgtattacc aaaagaaaaa gtagaagatt ctgctgctca ttaatcaaag
     4741 gacgctgtgg cgtccttttt gctaataacc ctctatttgt aaataaaaag gaataacact
     4801 atgcaaaaac tcacattttc accaccactt ttaaatacgc cttgcccttg gtgttcggag
     4861 ttagagagct tgcgtgaact ttatgcgtgt gaatataccg gtgcggtaac aacccgtact
     4921 tcaatgcctc aaccatatcc acacgattgg gcgaagaacc aatatgtact ctttgattcc
     4981 aacgcacaga aaacagcaag tgtgaatact caagatgcaa ctagcttaca aacagcaagc
     5041 cttaacacca tcggtttaag cccaaataat ctggatacca ccatcagctt tgtacgcacc
     5101 atttcaaatg agctgacagc gccatcaagc aaaccattta ttatttcggt gtttggttca
     5161 cccgaagagg tgggggaatg ttatgaaaaa attgttgctt tccaaactga agtgaaaatg
     5221 cctttggcaa tggagattaa tatctcttgc ccgaatattc cgggtgaaat ttcgcctgct
     5281 tattccgcag aagaattatc acattacttg cacgcactac aaacttcgct aaaaaaactg
     5341 gctcaaggtg ataatacttt accaatcggg attaaaattc caccttttac ttaccaaaat
     5401 caatatgatg aattaatcaa aggcttatta caagcggtcg aaaatggcga aaatttacca
     5461 atttccttta ttacttcaac caatacgctt ggctcatcgc ttgtcttaaa tgctggcaaa
     5521 gcggtattaa attcagaagt gggaacgggc gtaggcggaa tggcaggaac ggcaatccat
     5581 gcactttctt tggggaatgt ttacacgatt cgccaaatgt tagatcaaga gcctaagctc
     5641 aaacatcttc aaattattgg tgtgggcggc gtgaatgata aagccggctt tgagcgaatg
     5701 aaatcggttg gggcagactt tgtggggtta gctaccgcat taggggtgaa aggaatcggc
     5761 gtttttaaag agattctgtc tgaataatga agaggagggc gtgcattgca cgcccgaata
     5821 aatgaaatta gcctaaccat ttctccacta attcattagt ggtttcttta tgtacccaca
     5881 tactgccaag ttccggcatt gggaatttgg tgtggttgta gccgacaaat tggcggaaat
     5941 caaacacggc gtgcgggtag ccgttgatca gtaaaaaggc ttgatagccg tcttcactcc
     6001 agcaaatttc taaacggcga ggttctttta atgaattttg ctcaatatcg ctgacccgaa
     6061 acacaaataa actatccact accggctgtt cggtttggtg taagtccatt gcataaaagt
     6121 agccgctttc ttcatcaatt tcaaacatca ctactaaatg ttcgtgctgg gttgaatgag
     6181 cgccattacg gtaaggttcg ttcagtagaa tatgagcagt taaaacagag tagagcatta
     6241 aattatcctt ataagtaaaa tgccaccgat ttctcagtgg catttaaata tttaatcagg
     6301 caattacgct tgacctttaa tctctttacg gccgttgaac ggagccggtg taccagcacg
     6361 ctctaacgct tcttcgatac ggattaactg gttgtatttc gctacacggt ctgaacggct
     6421 cattgaaccg gttttgattt gacctgctgc tgtacctact gctaaatctg caatggttgc
     6481 atcttcagtt tcgcctgaac ggtgagagat aactgcggtg taacctgcat ctttcgccat
     6541 tttgattgca gctaaagttt cagttaaaga accgatttgg ttgaatttga ttaagattga
     6601 gtttgcgata cctttctcaa taccgttttt caagattttg gtattggtta cgaataagtc
     6661 atcaccaact aattgtactt tgtcgcctaa tactttagtt tggtatgcga aaccttccca
     6721 gtcagattcg tcttgaccat cttcgataga cacgattggg tactctttgc ataagccttc
     6781 taagtagtga gtgaactctt gtgaagtaaa ggttttgcct tcgcctttca tatcgtacac
     6841 attgcgttct ttgtcgtaga attcagatga tgcacagtcc atcgctaaag ttacgtcttt
     6901 acctaacaca tagcctgctt tttctaccgc ttctttaatg cacgctaatg cgtctgcgtt
     6961 tgaagccaag tttggtgcga aaccaccttc gtcacctaca gcagtattta agcctttcgc
     7021 ttttaatact tttgcaagat tgtggaatac ttcagcaccg atacgaagag cttcttttaa
     7081 tgtagaagca cctaccggtt gaatcataaa ttcttgaatg tccacgttgt tgtcagcgtg
     7141 ttcaccacca ttgatgatgt tcatcattgg taatggcatt gagtaaacac ccggtgtgcc
     7201 gtttaattca gcaatgtatg cgtaaagcgg taagcctttt gaagcggctg ctgcttttgc
     7261 tgttgctaaa gaaaccgcta agatagcgtt tgcaccgaat tttgatttgt tttctgtgcc
     7321 atctaaatcg atcataattt ggtcgatttc agcttgtgca gaaccgtctt tgcctactaa
     7381 tgcgtttgca atttcgttat ttacggcaga aaccgctttt aatacacctt tacctaagaa
     7441 acgacctttg tcgccatcac gtaattctaa tgcttcacgt gaaccggtag aagcacctga
     7501 tggagcggct gctaagccta caaaaccacc ttctaagtga acttctgctt ctacagttgg
     7561 gttaccacga gagtcgatga tttcacgacc gattacttta acaattttag ccattgttga
     7621 tgtcctctaa tatacgagtt aatagaaaaa agaataggta tatagtaaag cgattttctg
     7681 cttttgtctt ggaaaaactg attgagtggc agaaaatttg ccactaattt gatctaagac
     7741 tatattcgcc tgagattata gcaacctttg caaaaaacgg caaaaatttg cccgcttgta
     7801 atgcttattt tttgactaaa aaagtcaagg tttcataatg tgctgtgtga gcaaacatat
     7861 caaacagctg cactttgtgt agttcgtaat ttgtcaaaaa tgtaaaatcg ttcgccattg
     7921 agacggcatt acaactggag taaatcaaat aaggtgagcc taattgattt aaaaattctg
     7981 ctaatagttt gccgatacca cgtcgaggtg ggttcacaat cactaaatcg ggtggagaac
     8041 cagcttcatt taaagcaaat tgtgcagaat ctaatgaggc aaattttacc tgctttaggc
     8101 cgagtttttc agccgatttg gtcgcacttg caatagctga ggctgaaatc tcaatgcctg
     8161 tcagctccac gttcgagttc ttcgcttgca aggcgttggc acaatgtaag ccgaaaccac
     8221 cgacaccgca gaacaagtcc cacaatttag caataggtaa atgctcaatc cagctttgtg
     8281 ctgtgtggta aagctggctt gctaccacag ggttagtttg gaaaaagccc tgagggcgaa
     8341 taaatagcgg tatgccgtta aaatgttctt ccagcacttt ttgttcggtg aggaaaatct
     8401 cagtttcgcc ttctaaaaga gcagcgtgtt ggggctgaat attcagacta actactgagt
     8461 tgggtggcag tttttccaac agttcgggca attcccgttc aaccaatgca cgctttgctt
     8521 cactacgaac cacaaaacgg agcataaatg attgattata ttggctttcg gtaatcagaa
     8581 tatattttag ctcacctttt ttcttactga tgttatacgg cactaaacca gctcgagcga
     8641 taaaatcttt caaaatcgga aaaagtctat gaaatgagga cgggtagagc agacagtcgg
     8701 ttaaatccac cccgctttga gcatcatttt gatcttttaa aatgcctaaa atcgggcgtt
     8761 ctacactgcc ggagaccacc attttcgctt tgttacgaaa ttgcgaaatt ggcgagccga
     8821 caagcggtaa gatttccgtt ttattttgca aaataaacgg caaaatcaac cgcttgagat
     8881 cggcctcttt ggcggctaat tgcgtgctgt atggcttttc aatccactgg cacgaagtac
     8941 agtcgccacg ctcaaaatgc gaacaatgca acaagctaga cattcgcttc cttccattcc
     9001 agccagttgt tttgtaaggc cgttaattca gcctgagttt gttggtagcg agagctgttt
     9061 tccagctctc gccaagtcac ggttttgcgt ttcattaaag aaaggcgacg ttctttttgt
     9121 gcttgagtcg gctgatattt cagcccgtct aacacttgca ccaggccttc aggctcgtta
     9181 caaaggagca ataaatcaca gccggcttgg attgcttttt cagaacgctc gacaaaattg
     9241 cccataaagc ccgcaccttt cattcccaaa tcgtcagaga atatcacacc gttaaagttc
     9301 agctgtttac gcaatacctc tttaagccaa tagcttgaac cgcttgccgg ctggctatca
     9361 cattgggtgt aaacgacgtg ggcaggcata atggcagaga gttttccttt ggcaataagc
     9421 tgtttgaacg gcagaatatc gtgattaaaa atccgctctt tcgggcgatc atcaaacggg
     9481 gtttctaaat gcgaatcggc taaaacgtgt ccatgaccgg ggaagtgttt gccggtggtc
     9541 gccataccga tttcacgcat tccgtcaata aaggcttcgg caacaggcaa aatcgctgct
     9601 ggctcttgcc cgaatgagcg atcgccaatc gctttgcatt cgtgtcctaa atccagtacc
     9661 ggagcgaaac tgaggtctat atcgagggca aacatttctg ctgccatcaa ccagccggtt
     9721 tctttcgcta attgcattgc ttgctctggc gttgtggcaa gttggttaaa agattgcatt
     9781 gccggcagtt tagtaaagcc ttcacgaaag cgttgcaccc gaccgccttc ttggtcgaca
     9841 gtaataagca acggtttttt cacccgctgg cgaatggatt tcactaatgc ctgaatttgt
     9901 gctttgtcgt agaaattacg ggtgaataaa attagcccgg aaactaaagg gtgttccagc
     9961 atttcgactt cttcttgagt cagttcttta tctttaatat caatcagtaa cataattttc
    10021 gttgagctat ttgcaaaaaa atgagcagat atgaccgctt gttgtgccta ttctacatta
    10081 aaaagccctt gatgttgatc aagggcgaat gattaagggc ataaatgaga cagagcaatt
    10141 atgcttgttc taatttagct tggttacgac gcatttttat gttgagcatt tcaaccacaa
    10201 ccgagaagcc cattgccgta taaaccgctg cttttggaat atgaatatca aaaccttcgc
    10261 cgactagtac aataccgatt aaaatcaaga acgctaaagc gagattttta atggttgggt
    10321 tgttatctac aaagtcccca atggttttcg ctgctaacat cattaccgca actgcaatga
    10381 taatcgcaat aaccattacc ggaatatcat ctgccattgc cacagcagta atgactgaat
    10441 caagggagaa aataatatca aaaattgcaa tttgaattaa caccataaaa aagctggctt
    10501 ttttaatgga ttcgcttttt tcttcgtgag attcggcaga aatggattct ttcagctcca
    10561 ttgcactttt aacaatcagg aataatccac cgatgagtag aatgagatct ctacctgaaa
    10621 ttggattgtt gccaatagtg aaaagaggct cgaccaaacg catcatccaa gcaagcgaga
    10681 gaagcaataa aatacgggtt cccattgcca gccccaagcc gataattcgg gcagattggc
    10741 gttgttcaat aggtaaacgg gaaacgagaa tactgatgac gatgatgtta tcaatgccta
    10801 atacgatttc aagcccggta agtgtaaaga gcgcaaccca agcttcagga tttgtgatcc
    10861 agtcaaacat aaaaatgtcc ttttaaaaat aagggattaa gtgatatttt ctatcaaata
    10921 gaattaaagc cgacatctta tagagtgtga ggacaaattt aaagggggca atgcaaaaag
    10981 ttttgtaaaa tttcggcggt aaaatgttta cgcaaataga aaccaagagg gagagattga
    11041 acaatctccc ctttagcgtt gatagcagag gtgatagagc ggttatttct acctttgggt
    11101 ctgagttgta acacttcgcc taaggttgca ttaattttat gcagttcacc taacacaatc
    11161 aactccatta attcctccca atcttgctgt aggcgggatt cttgtgtgat agtcggagac
    11221 cataaaatcg gctgaccgat atggcgttcg gcaaggggta tctttcgttc cccttcaacc
    11281 ggaatccaaa gcacacggga aagcttatgt ttaacgtggg aggtttccca aataataccg
    11341 ttgttttggg ttaaaggagc aaggctgacg aatgtggttt ccagcggtaa tcctttctga
    11401 ttgaccggaa tggttttcag ctcaatgcct aaatgtgcaa aatcctgttc ggctttactg
    11461 ccggctttcg cacctaaagc ggtttcaatc agagtaccga cccagccttt atctcgtttc
    11521 agatctgctg gtatcggaat atgaagcatc tcggcaattt cacctaaagt gaaccctgcc
    11581 agccattccg ctttgcttaa taatgcctgc tcggttggag agaatgtaga taattgcatt
    11641 gcacttagtt aattagacta aactggcaag cggtcaaatt taggcagaaa tttgcaaaaa
    11701 attactaaaa aataaccgct tgtgaggaaa ttacatccaa gcattactgc gaataacgcc
    11761 tactgcaatg ccttcaattt caatatattc ttgagcaggg tttactacaa tcggttttaa
    11821 ttcatcgttt tcagggtgta agtaaattaa ttcacctttc ttctctaagc gtttaacagt
    11881 cacttcatca tttacccgag caaccaccac ttgcccgtta cgagcggtat tggttttatg
    11941 aacggctaat aggtcaccgt ctaaaatacc gattttttcc attgaattgc catttacttt
    12001 gagtaaataa tcagcacttg gattaaacat cgcaccattc accgggtaat ggttttcaac
    12061 gtgttcaacc gctaaaatag gtgtgccagc agctactttg ccaatcaacg gtaagccttc
    12121 atcttcatcg ttggcagctt ggttttcgtc ttcgactaaa atgcgaattc cacgagatgt
    12181 acctgataac atttcaatat agcctttacg agcaagggct tttaagtgtt cttctgccgc
    12241 attaggtgat ttaaagccga tttcacgggc tatttctact cgggttggtg gcataccggt
    12301 ggtttcaata tggtttttga cgaaatcaaa aatttcttgc tgacgggcag ttagatgttt
    12361 acgcatttta agttaatcct cactgtcttt atatacagaa aatattgata gtatatacag
    12421 tatttttgat tttgtaacta ataatttcac gaaattccat aaaaatttat ggtagaatgg
    12481 aagaaattag aggttagacc tccaacaata acgattctaa aaggatattt atatgtctgg
    12541 cttattaaat ttttatcgag ctttcctaaa cttaccactt tcacttttag taaaatctcg
    12601 ctctattccg actcatccgg tggctgaact ggaactaaat cttgaacagc cgattgtcta
    12661 tgttctacct tatacctcgc aaaccgattt attaatttta caaaaaaact gcttggcttt
    12721 gaatttgccc gatccgttgc aagaaaatgt gattgaaggg caaacattgc ttcgttttgt
    12781 atttttagat gaaggtcgcc gtttttttaa atctaaaggg gcgaaaagtg agacagagtc
    12841 gattttttat cgttatttag atttacatcg tgctaatgct gaattagacg tccaattagt
    12901 gccggtttcg gtattatggg ggcgggctcc gggcaaagaa gatgcccgcc atttacaggt
    12961 gcttacctca ttccaacgtt ttttatccat ggtttggttt gggcgtgata attttgtacg
    13021 tttctcccct gcagtatcgt tacgctatat ggtaactgaa tatggtgcag atgaaaaaat
    13081 cgctcaaaaa atcgcgcgtg tggcgaaaat gcactttgca aaattgcgtt attcagcaat
    13141 ggggcctcgt ttaccaaatc gtgatgcgat gtttaataaa atcctgaatt cagaggtgat
    13201 tcaagctgcg attgcggaag aagcgaagaa atcatcgcct gaaaaggctc gcaaagaagc
    13261 cgagaaaatc attaatgaaa ttgccgctga tgtaaaacac gagagtttgc gtgtagcaga
    13321 tcgagttctg agctggcttt ggaataagct ttatcaaggg atcaacgtgc aaaatgcaga
    13381 ccgtgtgcgt aaattggcat tagaaggtca cgagatcgtt tatgtgcctt gccaccgtag
    13441 ccatatggac tatttgctcc tatcttatct actttaccat caaggattag taccgccaca
    13501 tattgccgct gggatcaatt taaatttctg gccggcaggc ccgattttcc gtagttgggg
    13561 agcatttttc attcgccgta cctttaaagg aaatcgcctc tattccacca ttttccgtga
    13621 atatttagcg gaattattct atcgtggtta ttcggtcgaa tattttattg aaggcgggcg
    13681 ttcacgcaca ggtcgtttat tagagcctaa aaccggtatg atgtcgatga gcctacaagc
    13741 cttacagcga gggctgaata gatctttaag tattgtgcct gtttatatcg gttatgaaca
    13801 cgtcttagaa gtcgatactt acgctaaaga gttgagaggt gcggcaaaag agaaagaaaa
    13861 tgcgggcttg gtgctacgag tgctgaaaaa actgaaaaat ttaggtcaag gatatgtgaa
    13921 tttcggtgag ccaattttgg tgaataatta cttaaatcaa tatttccctg agtggaaaga
    13981 gccttccgaa gatggacgac ctaagtggtt aaatgaagcc gtggataata tttcacatca
    14041 agtaatggtg aatatcaata aagcggcagc agttaatgcg aaaaacttag tggggtcagc
    14101 attattggca tctcgccagc gtgcattaac ccgtgaacaa ctcattgaac aacttggaag
    14161 ttatattcag ttatttcgta atgtacctta ttctaaagat atgacattac caactgaaag
    14221 tgcagaagtg atgttgaatc atgttattca tttacctcgt tcgggcgttt taattgaaaa
    14281 agataatttt ggtgaactgg ttcgtttaga acgagaatct gctgtgttaa tgacatatta
    14341 cagaaataat gtgcagcatt tatttgtgtt gccttcactt gttgcaagta tggtacttca
    14401 tcatgaggct gtttcgaaag atgttgtgat taagtcggtt aatcgtattt atccattctt
    14461 gcaagcagag ttattcttac actttaagca agaagaatta aaagcacata ttgaagcaat
    14521 tattgcggaa ctaagtcggc agggggtgat taaaaacgaa agtgatatgt taatgatcaa
    14581 tcgctcacat attcgtacct tgcaattaca ttcagctggt gtgcgtgaaa tccttcaacg
    14641 ttattatatt agcctaagtg tcttgttgga gcagccaaat attagtcgtg gctatttaga
    14701 aaaagagagt agttcaattg ctcagcgttt atcagtcttg catggtatta atgcgccgga
    14761 gttttttgat aaggcgattt tctctacctt tacatcaagt ctaaaagcac aagggtattt
    14821 tgatggtgat gataatttag cgattgcaaa agttaaagaa acggaatcgt tgttacgtag
    14881 tttgatttcg attgaagttc aacagaccat tcaaggtgcg atggctaaag tcgcagaatc
    14941 tgtagagaat cctaatatcg caggataata aatcaaagaa gggcgctaac aagcgctcgt
    15001 ttcttgcaat tttgttgcca aaaataaaag ctgaatgcgc gaccacattc agctttttta
    15061 cttcctatat aattattttg gttcaccgat tggtaaaaca gtcttaccaa aactttcatt
    15121 aataatatcc gcagcggcta agtagaacgc taagaatgcg gttaataaac cgaagttacc
    15181 accaatgtta gttagggtgg tgttatgggt aaaatcacct gcggctaaaa ggtagaaagt
    15241 aatggttaaa cttaagaaaa tagcttgtaa tgcacgggct tttgctagtg tgccgatgaa
    15301 catcataagt gtgaatgttc cccaagctac taagtaccaa ccaacgaatt ctgccgatac
    15361 attcgcagca aagaacactt taaataatgc aaaagaccac cagaatgcac catagctggt
    15421 aaacgcagta aagccgaacg tgttaccttt agcaaattca aacatacctg caatcatttg
    15481 tgatgtgcca ccgaaagcaa atcccattgc taaaactaaa cctacgtttt caccgctgaa
    15541 tgtaccgtta ttgattaggc ttagtaaaaa tgtagtaagt gcaaaaccgc ataaaccgag
    15601 cggagccggg ttagttcctg aatttggagc tgacattgaa aacctctgtt atattgttac
    15661 accataagtg tggtaattgt ttatttacgc cgataaatca gacgttatgt gcctaaaatt
    15721 tagggcgata aagtatagcg attttgcagt aaattgacta gaaatttccg agacaagcgg
    15781 tgagattttt gcaaaatttt gccaaaaaat gaccgcttgt tgttgtcatt tagctatgga
    15841 tttaactgcc gatattggct gggtgttacg caatattgct ttttaaaggc ggtaataaaa
    15901 tgcgactcgg attggaagcc gcaagataag gcgatactta ataccgaccc agcttggctt
    15961 ttgagcagca ttgctgcttt ttgtagccta attttgtgta caaaagcatg tgggctaata
    16021 cataaatgtt tgttaaataa gcggactaac tgggcacgag aaaggtggat aaatgccgcc
    16081 atatcatcga cttgccattc gtgttcggga ttaagcaaaa tagctttgat caaaggtctt
    16141 aagtgtaagt cttgccaacc ttttaaaata ccgaataact gattgttatg gttaactaga
    16201 tgttctcgta agatcatagt taaaataaca acagcaagcg agttaaccac agattttacg
    16261 gctaaattag gtgtttctgc ttcttgtttt agaatatcta acattgcttt taatggtgtc
    16321 tcggcaactt gaaatacgat catttcaggt aagctttcca ttaattcggc ttgatggtca
    16381 taataaaaat ggaggcagaa catatcgcat tctgattgag aaagtcctgc ttgggtgagt
    16441 gtaaatgcac ccaattgttc agggtttacc gcatttttgc tggtcaaagg ctgtatttga
    16501 ctacgtaatg tatgatcggc aaatctgggg aaaaatacaa tatctccctg tttaaggtga
    16561 tgggttttcc cattatgttg tagataagct tgcccatagc tgatgatatg agcgattgct
    16621 tgtccggttt gatgcggatt ctcaagttgc caatctccct gtaactgaca tttcacactg
    16681 attccggctg agatttgagc gaaagctaga agcctatcta atatatccat tgttcattcc
    16741 ttatatttcc accttaaatt gcgattattt cattataata tgagctgatt tgataataaa
    16801 gtttatcaga taaacgcaat aataaatgcg ttttttcata ttattcactt taggaggaaa
    16861 tcaatatgtc ttcattccaa aattggacag aacacacagc tcacgttaag caatcttttg
    16921 gtaaattagg gcaaaaacac cctaaaatgc ttgaagctta taaagcatta ggtacagcgg
    16981 ccgcagcgga agcattagat cacaaaactc gtgaattaat tgcattagca gtagcgatta
    17041 caacacgttg tgaaagttgc atcagtgtac acgcagaaga agcggcaaaa gcaggtgcaa
    17101 ccgaaagcga aattgccggt gcattagcga ctgcgattgc attaaatgcc ggtgcggcat
    17161 atacctatgc tttacgtgca ttagaagcgg tggaagagca aaaataagga gcaataaatg
    17221 aagaaattgg cttggatttt aggctttgca gctatgatgc caatgatgtc tagtgctaaa
    17281 caagcatcag ttcagcaagt gcaggctgaa aaagcagcgg gcatttggat tgatgtacgt
    17341 tctgctgaag aatttcagca agggcattta aatggtgcaa ttaatgtaac gcatactgaa
    17401 attgcacaac gtatcgcaga agttgctcca gataaaaatc agccgattca tctttattgc
    17461 cgctcgggtc atcgagctga agcggcgctt aatgagctaa aaaaattagg ttacagcaat
    17521 gtaactaatc atggtggtta tgacgatctg attaaagccg ggttgaaata actgttttga
    17581 gtgccaagca tttgcttggc acttttcgtt tatatctgag gttaaaaatt atgagtgctt
    17641 ttaacaattt tgttaatttt gttgcaaata ttgttgctcc aatgcaacgc caattcatta
    17701 actttgtacg tattgccatt tgtatcgtga tggtttggat tggtggttta aaagtctgcc
    17761 aatatgaagc agacggtatt gcccattttg tgtctaatag cccgttcttt agttatatgt
    17821 acaaaaaagg cccgaattta gttgatgacg gcacaggtaa aatggtgatg gaatataccc
    17881 ttcacaaaaa ccctgaaggt aaaatggtgg caaaaaacat cgaatggcat aaagaaaacg
    17941 gcacttatac tgcatcttat atcatcggtg caaccattgt gacggttggt ttattgacgt
    18001 tatccggtat ttggttcccg gtttccggta tggcgggggg cttactcacc tttggtatgt
    18061 cgattgttac actctctttt atgatcacca cccctgaaat ttgggtgccg aatttaggtg
    18121 gggatatgcc aaccccagcg catggtttcc catatctgtc agcagtcggt cgtttaattg
    18181 tgaaagatgt gattatgatg gcaggcggct tggttgccgc agcggaatgt gcaaatcgca
    18241 ttttagccag acgtaaagcg attgcttaat tgatagtggt aatgcaagcg gtcattttct
    18301 tgtaaaattt tgcaataaaa tgaccgcttg ttttttgtca atttgccata atttcaagta
    18361 taattcaatt acgtaatcgt ttgcttttat ggagaggaat aaaatgacaa caatcggtac
    18421 accgttaaga acgaacgcta caaaagtgat gatgttaggt tcgggcgagt tggggaaaga
    18481 agtggtaata gagctgcaac gcttaggcgt agaagtgatt gcggtggatc gttatgacaa
    18541 tgcacctgca cagcaagtgg ctcaccgtgc ttatacgatt tcgatgttag acgggaatgc
    18601 attgcgagat ttggtggaga aagaaaaacc ggattttatt gtgcccgaag tagaagccat
    18661 cgcaactgca accttggttg agttagagca agagggatat aacgtaatcc caacggcaaa
    18721 agcaacgcaa ttaacaatga atcgagaagg cattcgccga ttggcggcag aagagttggg
    18781 cttaaaaacg tcgccttatc gttttgtgga taattttgaa cagttccagc aagcgattca
    18841 agaaatcggc attccgtgtg tggtcaaacc gattatgtct tcttccggac acgggcaatc
    18901 agtaattaaa tctgaagcgg atattcaaca ggcttgggat tattcgcaac agggcggacg
    18961 tgccggcggt gggcgtgtga ttgtagaggg ttttatcaaa ttcgattatg aaattaccca
    19021 gcttaccgtt cgccatattc acggcacgtc gtttttagct cccatcgggc atattcaggt
    19081 tgatggcgat tatcgtgaat cttggcaacc gcagcaaatg tcggacattg cattgaaaaa
    19141 agctcaagaa accgcagaaa aaattacctc tgcactgggc ggaagaggga ttttcggcgt
    19201 ggaacttttt gtctgtggcg atgagattat ttttaacgaa gtctccccac gtccacacga
    19261 taccggaata gtaacaatgg catcacaaga gctttctcaa tttgctctgc acgcccgtgc
    19321 gattttgggc ttaccgattc cggaaattta ccgcatcagc ccggcagctt ctaaagcgat
    19381 tgtggttgaa gggaaatcgg ataatgtgcg ttttggcggt gtagataagg tattagccga
    19441 aatcgggacg aatatccgct tattcggtaa aggcgaagta aacggacacc gccgattagg
    19501 ggtaattctt gctcgtgatg aaaatacagt gagagcatta gaaaaagctc ggcgagctta
    19561 tgataagtta gatattcaat tataaagtca ggattttgat attcgttgat agtaggcatt
    19621 ttatgcctac tatcctatag gcctctaatc aaattggatg aaaaagttga agattgttaa
    19681 tcctctttgc cgagaatttg gttcacttcg ctcttataca atactgcttt tgctccaaat
    19741 acggcttgta caccgccacc gacttccagc acgtcaatcg caccgagttt tttcagtgtt
    19801 gctttatcca cggctttcac ctctttcact gccacacgca gacgggtaat acaagcatcc
    19861 acattttcga tattatttgc agagccaaga gcggcgataa ttttatgggc attttcagtc
    19921 agtgagctgg tttgttgttc gactacctct tcactctctt ccgcacgtcc cggtgtcatt
    19981 acgttgaatt ttttgatcag gaataggaac gagaagtagt aaagtgccgc ccacggcaag
    20041 ccgactatga tcactcgaag ccagttagtg ttctcgttgc cttgcaaaat gccaaacagg
    20101 gtgaagtcga tcacgccacc ggagaaggtg ttaccaatcg agatgttgag taagtctgca
    20161 atgtagaacg acacgccgtc taaaaaagcg tggaacacat agagccacgg ggcaacaaac
    20221 aggaacataa attcaatcgg ctcggtaatg ccggtgataa aagaggtgag cgctgcacct
    20281 aagaacagac cgctaatcgc accacggcgg gctttcggca cagcgtgata catcgctaaa
    20341 caggcggcag gtaagccaaa catcatcgta tcgaaacgtc cagcgaagaa acgtgtacct
    20401 tcggtaaata agccttgatg ggttggatcg gcgagttggg cgaagaagat tttttgcgcc
    20461 ccgataatgg tttcaccatt taccacttct gttccgccca attcggtgta ccaaaacagc
    20521 gggtagatca tatggtgtaa gccgaccgca ccgcttaacc gcattaagaa accgtagaaa
    20581 aaggtgccga tttcgcccat ttccgcaatc ccttgccctg ctgaaaccaa ccactgttgg
    20641 aaagccggcc agatcaaaaa gaacactgcc ccgacaaaaa tcgcagcaaa ggcggtcaca
    20701 atcggcacaa accgagagcc gccaaagaag ccgagaattt gcggcagctg aatgttgtgg
    20761 tatttgttat gcagtttcac cgtaatcaag cccattacca gcgagccgat cacaccggta
    20821 tcaatccctt tggtttcagg aggaaacagc ggaatgaggg cagaaatcgt gcctgtcata
    20881 atcaaataac cgaccactgc tgccagtgcc gctacgcctt tatctcgttt tgctaatcca
    20941 atgcctaaac cgatacacag taataatgca aggttgccaa acaccacact gcctgccgat
    21001 gccataatct ggaaaatgcc ctgtaaagtc gggttatcca gtatcgggta ggcttgcacc
    21061 gttgccttat tcgacaaagc tccgccaatc cctaacagca aaccggctgc cggtaaaatc
    21121 gcaatcggca gcataaaagc ttttccgact tgttgcagtt gtttgaacat aaaatttctc
    21181 cttttttatg gttgtatttg atggtttata gcatactgaa atttagccgt atgaggtgtg
    21241 atataactca cagatttgca aaatttttag caaattcgac cgcttgtaaa aaaattaccg
    21301 cttgcggaaa aattgaagta gaattaagca tttttttagc aaacacaaca taaaaaattt
    21361 ggagaagatt atgcctattt tacgttcagc aacttccact cagggtcgta atatggcggg
    21421 ggctcgtgca ttatggcgtg caaccggtat gaaagaaaat gattttggta agccgattat
    21481 tgcagtggtg aactcattca cccaatttgt gccggggcac gtccacttaa aagatatggg
    21541 gcagttggtt gcggcagaaa ttgaaaaagc cggtggggtg gcaaaagaat tcaacaccat
    21601 tgcggttgat gacggcattg caatgggaca cggcggaatg ctttattctt taccaagccg
    21661 tgatttaatt gcagacagtg tggaatatat ggtgaatgct cactgtgctg atgcgatggt
    21721 gtgtatctct aactgcgata aaatcacccc gggaatgtta atggcagcaa tgcggttaaa
    21781 tattccgact atttttgtct ctggtggccc gatggaagcc ggaaaaacta aactttccga
    21841 tcaattaatt cgcttggatt tagtcgatgc aatgatcgaa agtgccgacc cgaatgtgtc
    21901 tgatgaacgt attgatgcga ttgaacgtag tgcttgcccg acttgtggtt cttgttcagg
    21961 tatgttcacc gcaaactcaa tgaactgttt aactgaagct ttaggcttaa gtttaccggg
    22021 caatggttca atgttggcaa ctcatgctga ccgtaaagag cttttcctaa gagcaggtcg
    22081 tgaaattgtg gaactttgcc gtaaatatta ccaacaagac gatgagagcg tgttacctcg
    22141 ctcaatcgct accttcgatg catttgaaaa tgcaatgagc cttgatattg caatgggtgg
    22201 ttcaagtaat accgtgcttc atttactagc gactgctcaa gaagccggcg ttgattttaa
    22261 aatggaagat attgaccgcc tctctcgtgt cgtgccgtgc ttaagtaaaa ttgccccgaa
    22321 taccaataaa taccatatgg aagacgtaca ccgtgccggt gggattatgg gcttgctggg
    22381 cgaattagat cgtgcaggtt taatccatcg ccacgttaaa acagtgctag gtttaacgat
    22441 agaagagcaa ctgaatcaat acgatattat tcgtaataaa gatgaagatt tacacaaatt
    22501 cttccgtgca ggtccggcag gaattcgtac tactaaggct ttctcgcaag attgccgttg
    22561 ggacactgtt gatgatgacc gtgtaaacgg ctgtattcgc aatgtggaaa atgctgtgac
    22621 caaagagggc gggttagcgg tattatttgg gaatattgca gaagatggat gtattgttaa
    22681 aaccgcaggg gtagatgagt ctatttggaa attcactggc accgcaatcg tgtttgaaag
    22741 ccaagaagat gcggtagcag gtattttagg cggaaaagtg aaagaagggc atattgtgat
    22801 tatccgctat gaaggtccga aaggcggccc gggtatgcaa gaaatgcttt atccaactag
    22861 ttatttgaaa tcaatgggct taggcaaaaa atgtgcttta ttaactgacg gtcgtttctc
    22921 tggcggtacc tcagggttat ctatcggaca cgcttcaccg gaagccgctt caggaggagc
    22981 gattgcctta attaatgatg gcgatacggt ggcgattgat attccgaatc gttcgattaa
    23041 cttaatggtt tcagatgaag aacttgctgc tcgccgtgca gaaatggaag cccgtggcga
    23101 taaagcgtgg cagccgctaa aacgtgagcg agaagtgtcg tttgcactaa aagtgtttgg
    23161 acattttgcc acctctgctg ataaaggtgc ggtgagggat aaatcgctgt taaagtaaat
    23221 aaattagaaa aaagaagcat ttcaataata tattgatctg ctctttattc agctgaatat
    23281 ttaatctagc tgaatggaga gcagatcgat agcctaattt acatcttttt gttttgatac
    23341 agggaaatgt attacaagca ttttgccggt tttggcagac ctgcaatttt agtggcttgt
    23401 tttgcaggac catcaggaaa caagcgttgt aaataacggc tgttgccttt ttcttcaccg
    23461 aatttttgtg ccattgtctt taccagcatt cgaattgctg gtgaagtttt gtattcttgg
    23521 tagaaatccc gcaccagata aataatttcc caatgttctg cggttaagct aatttgctct
    23581 ttttcggcga ttttttctgc taattctaca gaccaatcat ttaaattagt taaatagcct
    23641 gaagcatcgg ttgggtattg gatattattt aattcaatcg tcatcaaata aaaatgccac
    23701 ataatgtggc attcctctta aactaaaacg ctagtcgtca ctacctagca caccgaagat
    23761 ttgtaagaag cttacaaata ggttgtagat agacacatat aaatcaacgg ttgcacgaat
    23821 gtagttggtt tcgccaccgt gaataatgtt gctggttgcc agtaaaatcg caccgcttga
    23881 gaaaatgaca aacaagctgc ttagggctaa acttaatgcc ggaattgcta agaagatatt
    23941 ggcaataata ccgactaata ataccacaaa cagggcaacc atcattccgc tgataaagct
    24001 catatctttt ttggtggtta atacataagc tgaacaagcg aagaaaacca atgcggttgc
    24061 accgaatgca agggcgacaa tatcccctaa acccgcaccg atgtaacggt ttaaaatagg
    24121 acctaaggta tagcctaaga agccggttaa agcaaatacg cttaagatac ccgcactgct
    24181 gtttgaggtg gcattcgtca agaaaagtaa gccgtaaaag ccgaccaata atccccacca
    24241 cggcatagcc ggtgcgttca tttgaattgc aacaaaagca acaactgcgg agaaagtcag
    24301 ggtcattgcc aataacatat aggtattgcg aagcactttg tgggtgctaa ttagagattc
    24361 accagttgaa tagctgtgag ctaaacgatt ttccataaaa attccttctg tttttgtgtt
    24421 taaatcggaa catccgatgg attaatatct atggataaat ttccataaat caagaagtaa
    24481 ggtagccgta atttattgta aagtcaatgc gattttgtaa cagaagagta aaaaaaaaca
    24541 tttagttgtg ttacacttaa taccactcta ctttatattc cttttcatcg atgaattcgc
    24601 tatgaagctc aatttcccaa cttatttaac cttatttcgg gtaggattaa ccccactttt
    24661 tattgtggct ttttatctgc cgacaaaata tgcgcctgaa atttcaacac ttattttttt
    24721 tattgcatcg attaccgatg cctttgacgg ctatttagca cgcaaatgga atcaaaccac
    24781 ccgacttggt gcatttttag atcctgttgc ggataaagtc ttggtagctg ttgcgtttgt
    24841 ctgcgtggcg gagtattacc atacttggtg gattactatt ccaatctgca ttatgattgc
    24901 ccgtgaaatt attatttcgg ctttgcgtga atggatggcg gagcttgggg aaagggccag
    24961 tgttgccgtt tcgatttggg ggaaagtaaa aacgactgct caaatgctcg cattaggtgg
    25021 aatgttatgg agacagaacc aactaatgga gattttagcc tttattctgc tttatattgc
    25081 agtgggttta acgatctggt ctatgatgca gtatttaaat gcttcaaaga atagtctatt
    25141 gaagtcataa gcggtcatat ttttattctt ttttgcaatt tgtagagtgg aaatatcgct
    25201 ctacaatttt caattttatc aactctaatg tctgaattta acgctaaatc cttcctgtta
    25261 aatgtgcctc accaaccggg tgtttatcgt atgtatgata gtaaaggcac gataatctat
    25321 gtgggtaaag ccaaagattt aaaaaagcgt ttagccagct attttcgtag ccaactttcc
    25381 agtaaaaaaa cggaagcctt ggtggcaaat cttgctaata ttgaaacgac gatcactcat
    25441 tctgaaacag aggcgttact ccttgaacat aattatatta aggaaaatca gccgaaatat
    25501 aatgtgttgc tcagagatga caaatcttat ccttatattc tgttaactaa acataagcat
    25561 cctcgtttaa cagcatttcg tggtagtaaa aagatcgccg gtgaatattt tgggccttat
    25621 ccgaatgtta cggcagttcg ggaaacactg aatttattgc aaaaaatttt tcctattcgt
    25681 cagtgtgaag atacttatta taaaaaccgt tcacgacctt gcttacagta tcagatcgga
    25741 cgctgtttag ccccttgtgt agagggctgt tattcacccg ttgaatacga tcagcaggtt
    25801 aatttggttc gtttgttttt acagggaaaa gatcaccaag tagtcgagca tctggtacag
    25861 aaaatggaag atgcggcgga ggctttggat tttgaaggtg cggcacgttt tcgggatcaa
    25921 attcaatcag taagagcggt gcaagaaaaa caattcgtct ctaatgatag gctagatgat
    25981 cttgatatta tctcgatcgt ttatcaaaat gggattgcct gtgtgcatat cttatttgtt
    26041 aggcaaggta aggtactagg caatcgttct tactttccaa aagtgccaag taatacagat
    26101 ttaaccgagc tcgcagatac ctttgtcggt cagttttatt tacaaatgaa ccagcaccgc
    26161 accataccta accaaattgt aattgatcat caattaagtg aatctaaggc actcagtgaa
    26221 attttaagtg agcaagcagg gcataaagtc agcattttag ataatgccat cagaggtgat
    26281 aaacagcgtt atttagcttt agcgagaact aatgcaatgg cagcattagt tttacaactt
    26341 aagcaagaat cccatattca aagccgttat caggcattga aagaaatgtt gaaaatgtca
    26401 gagattaaaa gaatggagtg ctttgacatc agtcatacaa tgggcaacca aacagtggct
    26461 tcttgcgtgg tgtttgatga aaatgggccg ctaaaatcgg attaccgccg ttttaacatt
    26521 gaggggatta ccggaggtga tgattatgca gcaatggagc aggctctctt gaaacgctat
    26581 aatcgagaat taccgccaga aaagatccct gatattattt ttattgatgg tggcaaaggg
    26641 cagttgaacc gagcgttaga tgtcttcgct aaacttgatg tggaatggga taaatcgaaa
    26701 ccgcttttaa ttggtgtggc aaaaggcgta gaacgtaaag ctgggctgga aactttaatt
    26761 atcagcaaat gggataaaga aattcactta ccgccagata gtcttgcctt gcatttaatt
    26821 cagcatattc gagatgaatc ccaccagcat gccattagtg ggcatcgtaa aaaacgccaa
    26881 aaggccttta ccgaaagtgg attagaatct attgccggtg tcggtgcaaa acgccgacaa
    26941 gcgttgctaa aatatttagg cggaatgcag ggggtgaagt ctgcaacctt ggaagagatt
    27001 caatcagttc cgggaatttc taaagcgttg gcagaggtta tttttgatac attaaaaaat
    27061 agttaaatta tcaatagcga tatcgcttcc agccgtaatg gtagcccact cctatgcttg
    27121 ggtaaattat agggtgaatt ggcagattta tgctttctga gcgtttatcg ctttggttta
    27181 atggctcatc atgttgcttt gtatttttat caacagtttg cttattgatt actcgttgat
    27241 ggtaatcctg aactgcttgc atatccattg gtactgtgct ttgttgttgg ggtgtcgaac
    27301 aggcggttag tgcaacgctc aatccgagta aaattaattt tttcatatca tttcctta
//
LOCUS       DANLTI010000016        27265 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.016, whole genome shotgun sequence.
ACCESSION   DANLTI010000016 DANLTI010000000
VERSION     DANLTI010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27265
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.016"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            114..2723
                     /gene="adhE"
                     /locus_tag="PXB09_000575"
                     /gene_synonym="adhC"
     CDS             114..2723
                     /gene="adhE"
                     /locus_tag="PXB09_000575"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDL5232723.1"
                     /translation="MAKNTQPFDAQAEVNELVEKGLKALDEFRKLNQEQVDFIVAKAS
                     VAALDKHGILAMHAYEETGRGVFEDKATKNLFACEYVVNNMRHLKTAGVISEDDVTGI
                     TEIADPVGVVCGITPTTNPTSTTIFKALIALKTRNPIVFAFHPSAQQSSAHAAQIVRD
                     AAVAAGAPENCIQWITQPSMEGTSALMKHPGIATILATGGNAMVEAAYSCGKPALGVG
                     AGNVPAYVEKTAKLKQAVYDIVMSKSFDNGMICASEQAAIVDKEIYAEFIKEMQSYGV
                     YLVNKKEKALLEKYIFGIDKAKDENCSGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIL
                     LAECAFVGEAEPLTREKLSPVLALLKSNSTEHGLELSEAMVNFHGLGHSAAIHTENKA
                     LAKTFGERVKAIRVIWNSPSTFGGIGDVYNSFLPSLTLGCGSYGKNSVGNNVSAVNLI
                     NIKRVGRRRNNMQWFKVPSKIYFERDSIQYLKSMHDVHKVMIVTDRSMVDLGFVDRIT
                     EQLRQRRNQVMIQFFTDVEPNPSLQTVQRGTELMRSFQPDTIIALGGGSPMDAAKIMW
                     LFYEQPEVDFRDLVQKFMDIRKRAFKFPQLGRKAKFVGIPTTSGTGSEVTPFAVITDG
                     DIKYPLADYSLTPTIAIVDPALVMSVPSHVAADTGLDVLTHATEAYTSILANDYTDGL
                     ALQAIKLVFENLEKSVKEFDETAREKMHNASTMAGMAFANAFLGICHSMAHKIGGKFH
                     TIHGRTNAILLPHVIRYNGTRPTKVATWPKYTNYVADVRFQDIARMLGLPAETPEQAV
                     EAYAQAVHDLAVRCGVKMSLREQGVDEQAFLNARRELALHAFEDQCTPANPRLAMIED
                     MEAIMTKAYYGKE"
     gene            2870..3766
                     /locus_tag="PXB09_000576"
     CDS             2870..3766
                     /locus_tag="PXB09_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDL5232724.1"
                     /translation="MQITILDGGISRELMRRNAPFHQPEWSAAALYEGPHFVQAVHED
                     FIAHGAEVITTDSYAVVPFHIGEKRFAADGKMLADLAGRLAKQAVKNSGNIATQIAGS
                     LPPMFGSYRADLIQMERFAEVAQPLIDGLSPYVDIWLCETQSAIIEPISIKALLPKDN
                     RPLWVSFTLTDDEPTTEPQLRSGESVKQAVEEMVKLGVQAILFNCCQPEVIGEALSVT
                     QKTLAELKATHIRTGAYANAFAPQPKDATANDGLDEVRQDLTLEAYLGWAKKWTEQGA
                     TIIGGCCGIGVEYIETLAKNLK"
     gene            3776..5185
                     /locus_tag="PXB09_000577"
     CDS             3776..5185
                     /locus_tag="PXB09_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDL5232725.1"
                     /translation="MSNKKIGLISLTALVLSSMIGSGIFSLPQNMAAVAGAEAITIGW
                     LITGVGIIFLGLSFFFISRLRPDLDGGIYTYAREGFGELMGFMSAWGYWLCATIGIVG
                     YLTVAFEGLGVFTDNPNTVIFGQGNTLASFIGSSIIVWLVHALIAGGIKEAAFVNLIA
                     TFVKVAPLILFIGLGIWYFDVDLFNSDVKATALNNSVSDQVKSTMLITLWVFTGVEGA
                     SVLSAHAKKRSDVGLATVLGIIIALALYVAITILSLGILPRETIANMANPSMGPLLDA
                     MMGPTGKVIITACLIVSVLASYISWTMYSAEVPYRGSKNGAFPKILDKVNKNGTPINS
                     LWFTGFIVQFCLVLVFVFEQSYNTLLLISTSMILIPYFLIGAYLFKLAIQTNATWYIK
                     LTGFMAALYGLWIVYAAGLEYLLLSVVLYVPGILLFLYSNYKFNGRLTLSTAEKVILI
                     VLLVIFGYAVIELPALLAA"
     gene            5292..6515
                     /locus_tag="PXB09_000578"
     CDS             5292..6515
                     /locus_tag="PXB09_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HDL5232726.1"
                     /translation="MQTYQHKALCRVRTITLFLSLTKDKLQWETALNAAKAEFDLLVP
                     AIQTQGYHIQSIRIVTNSFGEYLDLTNIETAKQDLAYLKQLLTQLNDSGLRIRFAIGE
                     AKTPHELALLPELILNYGDLSNACVNIEPDEFGILDNETILQSAQIIKQIAEITPRGE
                     GNFNFTVNFNCKPFIPYFPASYHSSKLPNSFVIGLETPDLLVAVLKELKASPHNDFYR
                     QCYETMSQALQYHVDEVLEAVKSVQHKLQFAFAGIDSSAAPSKNCASMTEVYELMGVP
                     FFGAAGTVEASSLLTKVFKSIKHVPLVGFSGLMLAVTEDLGLAAGTHKAQFDIRALLT
                     YSAVCGIGLDTVPISNEATVEQIAALMRDTGTMAFRLNKPLTVRLFPIPNKSAGEVTE
                     FESDDLCNCRILAVP"
     gene            complement(6553..7749)
                     /locus_tag="PXB09_000579"
     CDS             complement(6553..7749)
                     /locus_tag="PXB09_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDL5232727.1"
                     /translation="MKQVIRFIVFSTLSLFSFSTFAKTIVAIDAGHGGKDPGAIGKNL
                     GILEKSVTLAISKELKALLDADPNFKAVMTRSGDYFIQLPQRTEIARKHRADLLVSIH
                     ADSSPRGDSLKGASVWVLSNSRASDEMGKWLEDHEKQSELLGGAGSVLSSNNERYLNQ
                     TVLDLQFSHSQRAGYELGKSILAKMSNVAALAKSSPQHASLSVLRSPDIPSVLVETGF
                     LSNSTEEAKLASANYRKQVARAIYNGLVAYRAKNAVASSSVSKKSDKEDKQNKKEEKT
                     AKADLTKKPASEKQEKNTQSDKTKLKEKSKKEDKKEDSAKTNKKKEQQLKEKTALEKD
                     QKNQSKKSDSQREIKVSNSGYHIVQQDETVYSIARAYGTTPQKISELNNLKNYQITVG
                     KKLKVK"
     gene            complement(7769..8260)
                     /gene="tsaE"
                     /locus_tag="PXB09_000580"
     CDS             complement(7769..8260)
                     /gene="tsaE"
                     /locus_tag="PXB09_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDL5232728.1"
                     /translation="MTDSLSFYCEDETKLLEFGQSFALELKKYLLQDQAHSLVVYLNG
                     ELGAGKTTLTRSIVRAFGHQGNVKSPTYTLVEEYQLPPFSLYHFDLYRLADPEELEFM
                     GIRDYFKPQTLCLLEWAVKGKGMIPEADFVIQIDYKNDGRQISLLPQNQTAVDILVNF
                     HQK"
     gene            complement(8260..8814)
                     /gene="orn"
                     /locus_tag="PXB09_000581"
     CDS             complement(8260..8814)
                     /gene="orn"
                     /locus_tag="PXB09_000581"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDL5232729.1"
                     /translation="MAQNEQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGP
                     VLAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGAS
                     PICGNSIAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRWKPEILDKFSKGNTHLA
                     LDDIRESINELKFYREHFIQLDQK"
     gene            complement(8824..9303)
                     /gene="coaD"
                     /locus_tag="PXB09_000582"
     CDS             complement(8824..9303)
                     /gene="coaD"
                     /locus_tag="PXB09_000582"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDL5232730.1"
                     /translation="MSYNVIYAGTFDPITNGHLDIICKASHLFGKVIVAVAQNPSKQP
                     LFSLEERVELVKQSCTQWQNIEVIGFSGLLADFAKQQNAKALIRGIRGADDIDYEIQL
                     AQLNYKLSGDLETIFFPPSIEWRYLSSTMVREIYRHNGDISQFVPQAVKNALKIAKV"
     gene            complement(9305..10585)
                     /gene="waaA"
                     /locus_tag="PXB09_000583"
     CDS             complement(9305..10585)
                     /gene="waaA"
                     /locus_tag="PXB09_000583"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDL5232731.1"
                     /translation="MLRLLYICLSYLLQPVVLLLMWYKGRKQPAYRKRLWERYGIYDE
                     SEKPKAKGVVIHAASVGEVIAATLLIKAVSKQYPELPLIVTTVTPTGSGRVQAAFGNS
                     VSHFYLPYDLPDAIERFLNFIDPKLMIVIETELWPNLIRKVNIRKIPFVIANARLSPR
                     SAKRYGWVKGSIKDMLNQISLIMAQDEVSRDRYLALGYAPAKMVNTGNLKFDLEITPQ
                     LHQSVIKTKASLNLTERPIWIAGSTHEGEEKLILDAHKLLLEHYPNLVLILVPRHPER
                     FGLVELLIQKSDLNYVKRTENKTLSQNTQVMLGDTMGEMMLLYGLSDIAFVGGSLVKH
                     GGHNPLEPIAFNIPVVSGLYTYNFPEIFEKLREVKGVIEIESSVEALTESIQLLLKQP
                     QIGQEIAKSGLSVLQENQGALKRHLDLLASYLEK"
     gene            complement(10765..12144)
                     /gene="yegQ"
                     /locus_tag="PXB09_000584"
     CDS             complement(10765..12144)
                     /gene="yegQ"
                     /locus_tag="PXB09_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDL5232732.1"
                     /translation="MTLKYAKPELLSPAGSLKNMRYAFAYGADAIYAGQPRYSLRVRN
                     NEFNHANLKVAIDEAHALGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDP
                     GLIMLVRENFPEMDIHLSVQANAVNWATVKFWRQMGLTRVILSRELSLEEIEEIREQV
                     PDMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGKIDEVGQI
                     VPKYEPEIEVKNVAPTLGNGEATDKVFLYTESQRPDEQMTAFEDEHGTYFMNSKDLRA
                     VQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESL
                     AHRGYTEGFLRRHTHDEYQNYEYGYSISERQQFVGEFTGKRNAEGLAEVAVKNKFLVG
                     DSVEMMTPKGNIVFKIERMLNRKNENVDAALGDGHFVFLDVPADIELDFALLMRNLVN
                     TNTRNPHQA"
     gene            12272..12643
                     /locus_tag="PXB09_000585"
     CDS             12272..12643
                     /locus_tag="PXB09_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232733.1"
                     /translation="MKLKYLLATTLLAFSTFTAAQSIKTEMMQMNMQANKLMRAESAE
                     EFSEIANDFIIITEKTKGIFPNSVEGDKAAQEDYQAGMQKLIDMVNQASEKAQAGELQ
                     EAKMLISELEMIKREYHKKYK"
     gene            complement(12682..16158)
                     /gene="dnaE"
                     /locus_tag="PXB09_000586"
     CDS             complement(12682..16158)
                     /gene="dnaE"
                     /locus_tag="PXB09_000586"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDL5232734.1"
                     /translation="MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDF
                     INFCGLVKFYGEALGAGIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILS
                     KAYQQGYVEFPMVEREWLAELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQY
                     YPNHFYLSVCRTGRADEERYIKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAI
                     HDSYTLDDPKRPKKYSPKQYFRTEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYF
                     LPNFPTGELSTEDFLVKKSKEGLEERLEFLFPDPEERANKRSVYDERLQVELDVINQM
                     GFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN
                     PERVSMPDFDVDFCMDGRDRVIEHVAETYGRQAVSQIITFGTMAAKAVIRDVGRVLGH
                     PYSFVDRISKLIPPDPGMTLEKAFAAEPKLPELYEADEEVKDLIDMARKLEGVTRNAG
                     KHAGGVVIAPTAITDFSPLYCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKW
                     ALEMINERLAREGKEPIRIETIPLDDKKSFALLLAAKTTAVFQLESRGMKDLISRLKP
                     DCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPILEPTYGV
                     IVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAAQREVFEKGAEAKGIDGKLA
                     GQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKIVG
                     FYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGVGEGPIEAILAARQKEG
                     KFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKM
                     EELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYLSGHPIGRFLKEL
                     SHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDRSGKLDITLFS
                     EALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAKSLALAISK
                     EQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAMFSELKA
                     LLGENSVELEFE"
     gene            complement(16383..17480)
                     /gene="lptG"
                     /locus_tag="PXB09_000587"
     CDS             complement(16383..17480)
                     /gene="lptG"
                     /locus_tag="PXB09_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDL5232735.1"
                     /translation="MQFFSMNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDV
                     GRGSYDGLKAAYYTFLTIPRDIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRF
                     RIGLAVMKTALPLVIFTMIIGEWGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGN
                     SFIYINHIKNEKSLDNVLIYQFGEGQNKRELQSVLKARTANYSDEKGWVLSKVEKSTV
                     GENQIQQAKQPDQVWQTSLTPSKLGIVSLKPESLSISGLADYVGFLKDTGQDPKRFEI
                     TFWRKVFQPISMAVMMLLAISFIFGPLRSSTMGAKIVIGIVAGFMFYVANIVFGNLSL
                     IATWLPIPVGALIPSLLCLIIVWWLLSKKRD"
     gene            complement(17480..18589)
                     /gene="lptF"
                     /locus_tag="PXB09_000588"
     CDS             complement(17480..18589)
                     /gene="lptF"
                     /locus_tag="PXB09_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDL5232736.1"
                     /translation="MILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVP
                     ADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVA
                     MFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFID
                     KIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSA
                     DFRISHFENYSAYLGYQDVESDEKLVQRADFKKLMETKTPEAKAELHWRLALILAVPL
                     MALLAVPMSSVNPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSV
                     AFLVLGVILNAWDSKFMSKLRYQFGAKKLTNKAVA"
     gene            complement(18763..19560)
                     /locus_tag="PXB09_000589"
     CDS             complement(18763..19560)
                     /locus_tag="PXB09_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232737.1"
                     /translation="MRFWGKTFVVGLIGLGTQNTIFANDDAQISRYEQAKLRLSYDGN
                     VGNLLQQLSQRLKVGFIAYDVDITRKISLQNETETAIKTINEQIESQLTNIDVRFEKI
                     GERLFLVVSAKDVAPLLQNEPKEVQFVGDVIFDGEPNLTEQAQSTAEATKVQNILNIA
                     TNQEKIMAAKGKKAPQYKTVTKDNIGLKNIRVTALGTFLVFDTSVDAAKLRVKGNFED
                     IAQGENIIAILHQNTEAPPKIEIEDSQGKKLILEAHKATSSKKSKKQ"
     gene            19798..21294
                     /gene="pepA"
                     /locus_tag="PXB09_000590"
     CDS             19798..21294
                     /gene="pepA"
                     /locus_tag="PXB09_000590"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDL5232738.1"
                     /translation="MEFSVKNGSVEKQRTACLVVGVYEPRRLCSAAEQLDKLSNGYIS
                     TLLRRGDLEGKAGQTLLLHNVPNVLADRVLLVGCGKERELTERQYKQIIQKSVQTINE
                     TGSMEAVSFLTELHVKGRTPYWNVRFAVEAIQEQLYAYNDFKSIKPEVRRELRRVIFN
                     VAHRKDLPDAERALEHGKAVALGISHAKNVANCPPNVCNPHYLAELAKGLAYDYPAIS
                     TTIVDEKQMAELGMNAYLAVSRASENEAFLSVIEYKGNPNADAKPIILVGKGMTFDSG
                     GLSIKPAEAMDEMKYDMCGAATVYGTIKAIAEMKLPLNVIGLLAGCENAVDGKAYRPG
                     DILTTMSGLTVEVLNTDAEGRLVLCDALSYVERFEPELVIDIATLTGACMIALGNHNS
                     GLMSPHNGLANELLAAAEQADDKAWRLPLGEEYQEQLKSNFADLANIGGRLGGACTAG
                     QFLSNFTKKYTWAHLDIAGTAWKSGAAKGATGRPVSLLTQFLINKAQV"
     gene            21468..22415
                     /gene="cysK"
                     /locus_tag="PXB09_000591"
     CDS             21468..22415
                     /gene="cysK"
                     /locus_tag="PXB09_000591"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDL5232739.1"
                     /translation="MTIYADNSYSIGNTPLVRLKNFGNGNIVVKVEGRNPSFSVKCRI
                     GANMVWQAEKDGILTKDKEIVDATSGNTGIALAYVAAARGYKLTLTMPETMSTERKRL
                     LRGLGVNLVLTEGAKGMKGAIAKAEEIAASDPDRYVTLKQFENPANPAIHQQTTGPEI
                     WDATEGKIDVLVAGVGTGGTITGVSRAIKQDKGKQIISVAVEPSESPVITQTLNGEEV
                     KPGPHKIQGIGAGFIPKNLDLSLLDRVEQVSSEEAITTARRLMAEEGILGGISSGAAV
                     AAADRIAKLPEFADKLIVVILPSASERYLSTLLFEGIEA"
     gene            22601..23863
                     /gene="rho"
                     /locus_tag="PXB09_000592"
     CDS             22601..23863
                     /gene="rho"
                     /locus_tag="PXB09_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDL5232740.1"
                     /translation="MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHA
                     KSGEDIFGQGVLEILPDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKI
                     RPPKEGERYFALLKVDSVNDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTA
                     RILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVT
                     EMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYN
                     TVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFE
                     EFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAADELQKTWMLRKVLNPMD
                     EVDAIEWLIDKLMMAKTNEEFFEIMKRS"
     gene            complement(23924..25042)
                     /locus_tag="PXB09_000593"
     CDS             complement(23924..25042)
                     /locus_tag="PXB09_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5232741.1"
                     /translation="MKKIKTTLSALALSLSLISVNSWAIPADYLSQDNISQYDKAFNF
                     VLAKVLPAPKGKEDGRGAPIEHLVIQYAPDYVDDPYLKEDVLNFRRWYWQAMYASLDQ
                     KVKEKPTYLNTYRLQAEAYFVNKEYREALSQLDQILRQNPRDIHALAMTVLASRVLED
                     TEQETARLSALKQLAPEVAQRMTDFFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPN
                     KDGTPSPLLLDRLQKTKEMAQKFPQAKIIVSGGAVKTEFAEADVMAKWLSENGIEKDR
                     LLLDPVARDTPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIGYPIEM
                     DSVGGGKPATPGKAKIEALYTYVNVARSMGLFELGDFK"
     gene            complement(25055..27202)
                     /locus_tag="PXB09_000594"
     CDS             complement(25055..27202)
                     /locus_tag="PXB09_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5232742.1"
                     /translation="MKRLRYSYLALILGSALPLSAYADGYLSNDNIRQFDARFNFFLA
                     NPLPAPIAKADGRGEAIENLVVKYASDYLNDIYLKEDVIRFRRWQWQDLYTSLDLKTK
                     QKPDYLNTYRLQAEAYFINKQYQEALSQLDQILRRNPNDVHAMAMSVVASRVLENPNT
                     EAERLLALYQISPSIAQKVQQYLHFTDTMLAASYGSEPQTTMIPDTIAVFGQSPNPDG
                     TPSKGLLQRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLL
                     DDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSIGYELEIDSA
                     GGGSPPNEKNKKGEALYTFVNVARAMGLFTLGDFENLLAKEQAEKEQREALEKAQQNY
                     LEKLVAERDQAVKNAENSANELEVARQALETAKQAHQQAEEELNKELSKTQEQLKQST
                     EALSRLIIKQNNPFSEHYVVQLNLMEQATYDLYRRLAEIEHTQDWNLWLSDSLSKYRL
                     KNRSTEDYHLLHIGLDHQVSHNWSIGGVFGISQGQIENRTHKVKGTSAGIYAGYRPTS
                     GLFWTNFFNYSHFTNQSGVTKRDNNAYSLSSEIGRNIVMSHQWQITPKLQLGWAKAGS
                     ARMFWAGTGLRLGKVIELNAIKLKPYADISYRFRNRHIDTLDSLSDRHRNVISIGIQA
                     VGNRHYFAIEGSMLHGDALKRSYGLHANYHYQW"
BASE COUNT         7902 a         6095 c         5328 g         7940 t
ORIGIN      
        1 gatcaaagca aacataaaac attattaatt tttaacgaca aaataactct tttgggtaat
       61 aatttcatca gttaaaaaaa ttatcaaatt taaattttat gaggaaccaa actatggcta
      121 aaaatacgca accatttgat gcccaagcag aagtgaatga gcttgttgaa aaaggcttaa
      181 aagcccttga tgagtttaga aaactcaacc aagaacaagt ggattttatt gtcgctaaag
      241 cctctgttgc tgcccttgat aaacacggta ttttagcaat gcacgcttac gaagaaaccg
      301 gacggggtgt gtttgaagac aaagccacta aaaacctgtt cgcctgtgag tatgttgtca
      361 ataatatgcg acatttgaaa accgcagggg tcattagtga agatgatgtc accggtatta
      421 ccgaaattgc cgaccctgtc ggtgttgtct gcggtatcac cccaaccacc aacccaacct
      481 caaccaccat tttcaaagcg ttaatcgccc ttaaaacccg taaccctatc gtttttgctt
      541 tccacccgtc tgctcaacaa tcttctgccc acgctgctca aattgtgcgt gatgctgccg
      601 tggctgccgg tgcaccggaa aactgtattc aatggattac ccagccttca atggaaggta
      661 catctgcttt aatgaaacac ccgggcattg caactatttt agccaccggc ggtaatgcaa
      721 tggttgaagc cgcttactct tgcggcaaac cggcattagg agttggtgca ggcaacgtac
      781 cggcttatgt agaaaaaacc gctaaattaa aacaagcggt gtatgacatt gtaatgtcaa
      841 aatctttcga caacggtatg atttgtgcct ctgaacaagc ggcgattgta gataaagaaa
      901 tttacgctga gtttattaaa gagatgcaat cttacggcgt ctatttagtg aacaaaaaag
      961 agaaagcctt attggaaaaa tacattttcg gtattgataa agccaaagat gaaaactgct
     1021 caggtgcaaa actcaattca gcggtggttg gcaaaccggc tgcgtggatt gcagaacaag
     1081 ccggctttaa agtaccggaa aaaaccaata ttctgttagc cgaatgtgcc tttgtgggcg
     1141 aagctgagcc acttacccgt gaaaaacttt cgcctgtact ggctctgtta aaatccaact
     1201 ccaccgaaca cggtttggaa ttgtctgaag cgatggtgaa tttccacggt ttagggcata
     1261 gtgccgccat tcataccgaa aacaaagcct tagccaaaac ctttggcgaa cgggtaaaag
     1321 ccattcgggt gatttggaac tcaccatcaa cctttggcgg tatcggtgat gtatataact
     1381 ccttcctgcc atcgcttacg ctgggctgtg gttcctacgg taaaaactct gtaggtaaca
     1441 acgttagtgc ggtgaattta atcaatatca aacgtgtggg cagacggaga aataatatgc
     1501 aatggtttaa agtgccatca aaaatctact ttgagcgtga ctcaattcaa tatttgaaat
     1561 caatgcacga tgtgcataaa gtaatgatcg taaccgaccg ctcaatggtt gatctcggct
     1621 ttgtggatag aattaccgaa caacttcgcc aacgtcgcaa ccaagtgatg attcagttct
     1681 ttaccgatgt tgaaccaaac ccaagcctgc aaaccgtaca acgtggtaca gaattaatgc
     1741 gtagcttcca gcctgatact atcatcgcac ttggtggtgg ttcaccaatg gatgcagcca
     1801 aaattatgtg gttattctac gaacaaccgg aagtcgattt ccgtgattta gtgcaaaaat
     1861 ttatggatat ccgcaaacgt gcattcaaat tcccacaatt aggcagaaaa gcgaaatttg
     1921 tcggcattcc aaccacctcc ggaacaggct ctgaagtcac accgtttgca gtaattaccg
     1981 atggcgatat taaatatccg ctcgctgact actcgcttac cccaaccatt gcgattgtcg
     2041 atcctgcgtt agtaatgtct gtgccgtctc acgttgctgc cgacaccggt ttagacgtat
     2101 taactcacgc taccgaggct tacacatcga ttttagccaa cgactatacc gacggcttag
     2161 ccttgcaagc cattaagtta gtgtttgaaa acttggaaaa atcggtcaaa gagtttgatg
     2221 aaaccgcccg tgaaaaaatg cacaatgctt ccacaatggc agggatggca tttgccaatg
     2281 ccttcttagg tatttgccac tcaatggcac acaaaatcgg gggtaaattc cacaccatcc
     2341 acggtcgaac caatgcgatt ttactgccac acgttattcg ctataacggc acacgcccaa
     2401 ccaaagtggc aacttggcca aaatacacca attatgtcgc agatgtgcgt ttccaagata
     2461 ttgccagaat gcttggctta ccggcagaaa ccccggaaca agcggtggaa gcttacgccc
     2521 aagcggtaca cgatttagcc gttcgttgcg gcgtgaaaat gtcgcttcgt gagcaaggcg
     2581 ttgatgagca agccttcttg aatgcccgcc gtgaacttgc cctacacgca tttgaagacc
     2641 aatgcacacc agcaaaccca cgtttggcaa tgattgaaga tatggaagcg attatgacta
     2701 aagcctacta tggcaaggaa taaagcacaa tttaatcgtt aaacttacta aatggccgct
     2761 tgcaagcggt catttttctt gaaattttta cttttccctt cacaaaatac tttcgctctt
     2821 ttacaaagca tagtattttt atcgctcctt ttatcttaca ggaaatacta tgcaaattac
     2881 gattttagac ggcggaatta gccgtgaatt aatgcgtcgc aatgctccat ttcatcagcc
     2941 tgaatggtct gctgccgctt tgtatgaagg cccacatttt gtgcaagcgg tacacgaaga
     3001 ttttatcgct cacggggcag aagtgattac taccgacagc tatgcggttg tgccgtttca
     3061 cattggcgaa aaacgctttg cggcagacgg caaaatgctt gccgatttag ccggtcgcct
     3121 tgccaaacaa gcggtcaaaa attcaggaaa tattgcaact caaattgcag gctcacttcc
     3181 accaatgttt ggctcttacc gtgccgattt aattcaaatg gaacgctttg ctgaagtcgc
     3241 tcagccttta attgacgggc tttcgcctta tgtggatatt tggctttgcg aaacccaaag
     3301 tgcgattatt gagccgattt ccatcaaagc attattgccg aaagacaacc gcccgctttg
     3361 ggtctctttt accctcaccg atgatgaacc aaccaccgag ccacaacttc gctcgggcga
     3421 aagcgttaaa caagcagtcg aagaaatggt gaagttaggc gtgcaagcga ttttatttaa
     3481 ctgctgtcag cctgaagtga tcggcgaggc attaagtgta acccaaaaaa ctttagccga
     3541 attaaaagct acccatattc gcacaggagc ttatgccaac gcctttgctc cacaaccaaa
     3601 agatgccacc gccaatgacg gtttagatga agttcgccaa gatttaaccc tggaggctta
     3661 tttaggctgg gcaaaaaaat ggacggaaca aggggcaact attatcggtg gctgctgcgg
     3721 cattggggtt gagtatattg aaacgctggc aaaaaattta aaataaggaa atcgaatgtc
     3781 aaataaaaaa ataggattaa tttcactcac cgccttagtg ctaagctcaa tgattggctc
     3841 ggggattttc agcttaccgc aaaatatggc agccgttgcc ggagcagaag ccattaccat
     3901 tggctggctg attaccggtg tcggcattat ctttttaggt ttatcgtttt tctttatttc
     3961 ccgcttgcgt ccggatttag acggtggcat ttacacctac gcacgggagg gttttggcga
     4021 gctgatgggc tttatgtcag cgtggggcta ttggctctgt gccaccattg ggattgtagg
     4081 atacctcacc gttgcttttg aaggtttggg tgtatttacc gacaacccga acaccgtgat
     4141 tttcgggcaa ggtaacaccc tcgcctcttt tattggatct tcaatcattg tgtggctggt
     4201 tcacgccctc atcgcaggcg gtatcaaaga agctgccttt gtaaacttaa ttgccacttt
     4261 tgtgaaagtc gctccgctca ttctgtttat cgggttaggc atttggtatt tcgatgtgga
     4321 tctgtttaat agcgatgtta aagccaccgc acttaataat agtgtaagcg accaagtgaa
     4381 aagcacaatg ttaatcacct tatgggtatt taccggtgtg gaaggggctt ctgtgctgtc
     4441 ggctcacgcg aaaaagcgtt ctgacgtggg actggcaacc gtattaggta ttattattgc
     4501 acttgctctt tatgtggcaa ttaccattct ttcactcgga attctgccac gggaaactat
     4561 tgccaatatg gcaaatccgt caatggggcc gttgctcgat gcaatgatgg gcccaaccgg
     4621 caaagtgatt attactgctt gtttaattgt atcggtgctt gcctcttaca ttagctggac
     4681 gatgtattcg gcagaagtgc cttatcgtgg ctcaaaaaac ggggctttcc cgaaaatttt
     4741 agacaaagtg aataaaaacg gcacgccgat taactcactc tggtttaccg gctttatcgt
     4801 gcaattttgc ttggtgttgg tgtttgtttt tgagcaaagc tataacacct tattgctgat
     4861 ttccacctcg atgattttaa ttccctattt cttaatcggg gcttatttat tcaaattagc
     4921 gattcaaacc aacgccactt ggtacattaa actcaccggc tttatggcag ccctttacgg
     4981 attatggatt gtctatgccg caggactaga atatttgctg ctttcggtgg tgctttatgt
     5041 acccggaatt ttactcttcc tctactccaa ctataaattc aacggcagat taaccctttc
     5101 aaccgctgaa aaggtcatct taatcgtgct actggtaatt tttggctatg ccgtgattga
     5161 gctgccagca ctattagcag cataattccc atcaaaaatg accgcttgca agcggttatt
     5221 tttctaggat cttctgcaaa gattcattag aatagaaaca acgtcaataa taaataaaaa
     5281 gaggagaaac aatgcaaact tatcaacata aagccctttg tcgggtaaga accattaccc
     5341 tttttctgag tttaaccaaa gataaattgc agtgggaaac ggcattaaat gcggcaaaag
     5401 cagaatttga tctattagtt cccgctattc aaacacaagg ctatcacata caatcgattc
     5461 gaatcgttac caacagtttc ggggaatatc ttgatctcac taatattgaa acagcgaaac
     5521 aggatttagc ctatcttaaa cagctattaa cccaacttaa cgatagcggt ttacgcattc
     5581 gctttgccat tggtgaggca aaaacacccc acgaattagc attactacct gagctgattt
     5641 taaattatgg tgatttatct aacgcttgtg tcaatattga acccgatgaa tttgggattt
     5701 tagacaatga aaccatttta caatctgctc aaattatcaa acaaatcgct gaaattaccc
     5761 caagaggtga aggcaatttt aattttacgg tgaattttaa ctgtaaacct tttattcctt
     5821 attttccggc aagctaccat tcaagcaagc tccctaacag ttttgtgata ggcctagaaa
     5881 caccagatct attagtagcg gtgttaaaag agctgaaagc cagcccacat aacgactttt
     5941 atcgccaatg ctatgaaacg atgtctcaag ccttgcaata tcacgttgat gaagttctcg
     6001 aagcagtaaa atcggtacaa cacaaattac aatttgcctt tgctggcatt gatagttctg
     6061 ctgctccgtc aaaaaactgt gcctcaatga cagaagttta tgaattaatg ggcgtaccat
     6121 tttttggggc agccggaaca gtagaagcct cttcacttct gacaaaagtc tttaaatcta
     6181 tcaaacatgt accgcttgtc ggtttttcag gtttaatgtt ggcagtaacc gaagatttag
     6241 gcttagccgc aggcacacac aaagcccaat tcgacattcg tgctttacta acttatagtg
     6301 ctgtttgtgg cattgggtta gataccgtac cgatttccaa tgaagccact gttgaacaaa
     6361 ttgccgcatt aatgcgagac accggcacaa tggcatttag actaaataaa ccgcttacag
     6421 tacgtttatt tccaattccg aataagagtg ctggggaagt gacagaattt gaaagtgatg
     6481 atttatgtaa ctgccgaatt ttagctgtac cttaaaataa aggctgatgg atatttccat
     6541 cagcctttca atttacttca ccttcaattt tttacctacc gtgatctgat aatttttcaa
     6601 attattcagc tcactgattt tttgcggcgt agtaccgtaa gctctagcaa tcgagtaaac
     6661 cgtttcatct tgttggacaa tatggtagcc actgttagac accttaattt ctctttgaga
     6721 gtctgatttt ttagactgat ttttttgatc tttctcaaga gctgtttttt cttttagttg
     6781 ctgctctttt ttcttattgg ttttagccga atcttctttt ttatcctctt ttttgctctt
     6841 ttctttcaat tttgtcttat ctgattgcgt attcttctct tgtttctcag aagcaggctt
     6901 tttagttaaa tcagctttag cagttttttc ctctttctta ttttgcttat cttctttgtc
     6961 cgatttttta ctgaccgaag aactagcaac tgcatttttt gcccgataag cgactaatcc
     7021 attataaatg gcccgagcaa cttgtttacg ataatttgca ctggctagct ttgcttcctc
     7081 ggttgaatta gataaaaatc ccgtttccac caatacagat ggaatatcag gtgaacgcag
     7141 aacacttaag cttgcgtgct gaggagacga ttttgctaat gcagccacat ttgacatttt
     7201 agctaaaatg ctcttgccta attcatagcc ggcacgttga gagtgagaga actgtaaatc
     7261 aagcactgtt tgatttaaat aacgttcatt gttgcttgaa agcaccgaac cagccccgcc
     7321 aagtaattcc gactgcttct cgtggtcttc caaccattta cccatttcat cgctagcacg
     7381 gctattagaa agtacccaaa ccgaagcccc tttcaaggaa tcgccacgag gcgaagagtc
     7441 tgcgtgaata gaaaccagca gatcggcacg atgcttacgg gcaatctcgg tacgttgcgg
     7501 taattggata aaataatctc ccgagcgtgt catcactgct ttaaaattag gatcggcatc
     7561 taacaaggct tttagctctt tagaaattgc gagggtaacg cttttttcca aaatccccag
     7621 atttttacca atagcccccg gatcttttcc cccgtgtccg gcatcaatcg ccacaatggt
     7681 tttggcaaat gtggaaaaac tgaataaact caatgtgcta aaaacaataa atctgataac
     7741 ttgcttcatt acctccccta caagcggtct atttttgatg aaaatttact aatatatcta
     7801 ctgcagtttg attttgcggc aacaggctaa tctgccgtcc gtcattctta taatcaattt
     7861 ggatcacaaa atcagcctct ggaatcattc ctttaccttt aactgcccat tcaagcaaac
     7921 aaagcgtttg tggtttgaaa taatcacgaa ttcccataaa ctccagctct tcaggatcgg
     7981 ctaagcgata caaatcaaaa tggtaaaggc tgaaaggcgg aagttggtat tcttccacca
     8041 gagtataagt tgggcttttt acattgcctt gatgcccgaa agcccgtacg atcgagcggg
     8101 ttaaggtggt tttacctgcc ccaagttcgc cgtttaggta aacaaccagc gaatgagctt
     8161 ggtcttgcaa taaatatttc ttaagttcta acgcgaatga ttgaccaaat tccagcaatt
     8221 tagtttcatc ttcgcagtaa aaagagagag aatctgtcat tatttttggt ctagctgaat
     8281 aaaatgttcc cgataaaatt tcaattcgtt aatggattca cgaatatcgt ccaacgctaa
     8341 atgcgtattg cctttactga atttatctaa aatctccggt ttccaacggc gtgccagctc
     8401 ttttaaagta ctcacatcta agtggcgata atggaaataa tcggctaaat caggcatata
     8461 tttatacaaa aaacgtttat cttgagcaat gctgttgccg caaatcggag aagcgccttt
     8521 tggcacccag cgttttaaga agtctaaagt ttgcaactct gctgcccgtt cagtcaattt
     8581 gctcgctttc actcgttcaa tcagcccgtt agcggtatgg gttttgacgc accaatcact
     8641 cattttctct aataaatcat cggtttggtg taccgcaagt accggtcctt ccgctaaaat
     8701 atttaaatcc ttatcggtca caatggtggc gatttcaata atgcgttctt tttccggatc
     8761 taaccctgtc atttcaagat cgatccaaat taaattttgt tcgttttgag ccattttatt
     8821 tccttacact tttgcaattt ttagggcatt tttgaccgct tgcggcacaa attggctgat
     8881 gtcaccattg tggcgataga tttcccttac catcgttgaa gaaaggtaac gccattctat
     8941 tgaaggggga aaaaaaatag tttctaaatc gcccgataat ttgtaattta actgagcgag
     9001 ttggatttca tagtcaatat catctgcccc acgaatacca cggattaacg ctttggcatt
     9061 ctgctgtttg gcaaagtctg ctaacaatcc actaaagcca atcacctcaa tattttgcca
     9121 ctgggtacag ctttgtttaa caagctccac tcgttcttca agactaaaaa gcggctgctt
     9181 gcttgggttt tgagcaacgg caacaatcac ttttccaaat aagtgagagg ctttgcaaat
     9241 tatgtccaaa tgcccattgg taatgggatc aaaggtgcct gcataaatta cgttataact
     9301 cattttattt ctctaaatag gaggctaata aatccaaatg gcgttttaat gccccttgat
     9361 tttcctgtaa cacgcttaag ccggattttg caatttcttg tccgatttgg ggctgcttaa
     9421 gcaataattg aatgctctcg gtcaaagcct cgactgaact ttcaatttca atcacgcctt
     9481 tcacctcacg caatttctca aagatttcag ggaaattata ggtgtaaagc ccagaaacca
     9541 ccggaatatt aaaagcgatt ggttcaagtg gattatgccc accgtgtttg accaaactgc
     9601 ctcctacaaa agcaatgtca gacaacccat acagtaacat catttccccc attgtatcac
     9661 ctaacattac ttgagtattt tggcttaacg ttttattctc agtacgtttt acataattta
     9721 aatctgattt ttgaatcagt agctcaacta aaccaaaacg ctccggatgg cgaggcacta
     9781 aaatcaacac taaattcggg taatgctcta ataagagttt atgagcatct aaaatcagct
     9841 tctcttcccc ttcgtgagta ctgccggcaa tccaaatcgg tctctctgtt aaattcagac
     9901 tagctttagt tttaatcacc gattgatgaa gctgtggcgt aatttctaaa tcaaatttca
     9961 ggttaccggt attaaccatt tttgccggtg cataaccgag tgctaaatag cgatctcggc
    10021 ttacctcatc ttgagccata atcagactaa tttggttgag catatcctta atgctacctt
    10081 ttacccagcc ataacgcttc gcagaacgtg gcgataagcg ggcattggca atcacaaatg
    10141 gaattttacg aatatttact ttacgaatta aattcggcca aagttcggtt tcaattacaa
    10201 tcatcaattt cggatcgata aaattcaaaa accgctcgat agcatcaggt aagtcataag
    10261 gcaaataaaa atgtgaaaca ctattaccaa aagcagcttg cacacgccca gagcctgttg
    10321 gcgttaccgt tgtgactatc aacggaagtt caggatattg cttgctgact gccttaatca
    10381 aaagcgttgc agcaatcacc tcaccaaccg atgccgcatg gattaccacc ccttttgctt
    10441 tcggtttttc cgattcgtca taaatcccat aacgctccca taaacgtttc cgataagccg
    10501 gttgtttacg ccctttgtac cacattaata gcagaaccac aggctgtaat agataactta
    10561 aacaaatata gagtaaacgt agcatttatt ttccttatac cataaccctc acctcttgtg
    10621 ggagagagtc aaatacgcca ataaatcgtt cctctcttgt tcgagagggg ggaacaagcg
    10681 gttattttta ccaaaaattt tgcaatctat atcctcaaag acaaaaccac ggaataacct
    10741 taatccgtgg tttatctcgc atcattacgc ttgatgtgga ttgcgggtat tcgtattcac
    10801 taagttacgc attaaaagtg caaaatccaa ctcaatatct gccggcacat ctaaaaagac
    10861 aaaatgcccg tcaccgagtg ctgcgtccac attttcattt ttgcggttaa gcatacgctc
    10921 gattttaaat acaatgttgc ctttaggggt catcatttcc actgaatcgc ccactaagaa
    10981 tttgtttttc actgccactt ccgccaagcc ttctgcattg cgtttgccgg taaattcgcc
    11041 cacaaattgt tggcgttctg aaatcgaata gccatattca tagttttggt attcatcgtg
    11101 agtatgacga cgtaagaagc cctctgtata accacggtgt gcaaggcttt caagagtatc
    11161 cattaaactt tcgtcaaacg gtttaccggc agcggcatca tcaatcgcct tacgatacac
    11221 ctgagccgtt ctcgcacagt aatagaacga tttcgtacgc ccctcaattt tcagtgaatg
    11281 cacccccatt tgagttaaac gctcaacgtg ttgtactgca cgcagatctt tagagttcat
    11341 aaaataggtg ccgtgttcat cttcaaaggc ggtcatttgc tcatcagggc gttgtgattc
    11401 tgtataaagg aacactttat ctgttgcttc gccattacct agagtaggag ccacattttt
    11461 gacttcaatt tccggctcat acttaggcac aatttgccct acctcatcaa tcttaccttc
    11521 ttccatttta tattcccaac ggcaagcatt ggtgcaagtg ccttggtttg ggtcacgctt
    11581 attgatatag cctgaaagca agcagcgacc tgaatatgcc atacacaaag caccgtgaac
    11641 gaagatctca agctccatat ccggcacttg ttcacgaatt tcttcgatct cttcgagtga
    11701 taattcacgg gataaaatca cacgggttag ccccatttga cgccagaatt tcaccgttgc
    11761 ccagtttacc gcattggctt gcaccgaaag atgaatatcc atttcaggga aattttcacg
    11821 caccaacata attaagcccg gatcagacat aatcaaagcg tccggcttca tatccactac
    11881 cacttttaga tctttgatga aggtttttaa ttttgagttg tgtggcgcaa tgtttaccac
    11941 cacatagaat ttttttccta aggcgtgggc ttcatcaatc gcaactttta aattggcgtg
    12001 gttaaattca ttattacgca cacgcaagct ataacggggc tgtcctgcat aaatcgcatc
    12061 ggcaccataa gcaaaagcgt aacgcatatt ttttaaagaa cctgcaggcg aaagtagctc
    12121 aggtttggca tattttaaag tcatattatt ctcttttctg ataacaagtc aggacttctc
    12181 gacgtgagaa gcgtaagcgg tatattttct aagaaatatt gcgtgatggc aagctaatcc
    12241 attacaatcc gatttttatg tggggaacaa tatgaaactt aaataccttt tagcaacaac
    12301 attactggct ttttcaacat ttaccgccgc tcaaagcatc aagacggaga tgatgcaaat
    12361 gaatatgcaa gcgaataaat tgatgcgtgc cgaatcggca gaagagttta gcgaaattgc
    12421 gaatgatttc attataatta ccgagaaaac caaagggatt tttcccaata gcgtagaagg
    12481 cgataaagca gctcaggaag attaccaagc cggtatgcaa aaattaattg atatggttaa
    12541 tcaagccagt gagaaagctc aagcaggtga attgcaagaa gcaaaaatgc tgatttccga
    12601 gcttgaaatg atcaagcgtg aatatcacaa aaaatacaaa taattcaaca cattaaaagg
    12661 gtgagctaaa gctcaccctt tctattcaaa ttccagttca accgaattct caccaagaag
    12721 tgcctttaat tcgctaaaca ttgcctcatt cgggctgatt cgccactcta ctccgccttt
    12781 gagcaatacc ctaccttccg ggctttggta ataaaaatgc agcggtaaag tgccttcttt
    12841 atgtggggtg atgatagcgg tcattttttt aataaaatct gcagaaagtt gctctttgct
    12901 aatcgctaac gctaaacttt tggcaaatcg accccttgct tcatcaaggg ataacacttc
    12961 tcgagccgac attttcagtc caccgctgaa atcatcaaac tgtaccgaac ctgttgccac
    13021 aataatttgg tcttgttgca tcaaatgccc gaaattttct aaggcttccg agaaaagggt
    13081 aatgtccaat ttccccgagc gatcttcaat agtcgcaatc ccaatacggc ttcctcgctt
    13141 ggtaactgcc actcgagatg ccataacaat tcctgaaacc gtggtcattt gccctcggaa
    13201 agtcggttgc aattcattca gccgattagg ggcatagtgg gataattctt tgaggaatct
    13261 accaatcggg tgtccgctta aatacagccc gagcgtggca cgctctccat ctaaaatcac
    13321 ttgctccgac cattttggcg tattggcgta agcattttgc acttcttccg gtgtctcggt
    13381 aagcacgcca aacatatcgc tctgcccgag ttcctccatt ttagcgtgct gatctgaggc
    13441 tttaagtgca tcttccaaat tcttcatcaa ggcagctcgg tgagggccta atttgtcaaa
    13501 agcaccggac ataatcaggc tttcaaaggt gcggcggttg atttttttca gatcgacccg
    13561 agcggttaaa tcaaatagat ctttaaattt cccctctttt tggcgagctg ccagaattgc
    13621 ctcaatcggt ccttccccaa cgcctttaat tgctcctagc ccgtaaacaa tttcgccttt
    13681 ttcatttacg ctaaaacgat gtttaccgct gtttacatca ggcggcacaa cggttaagcc
    13741 catattcata cactcatcgt agaacccgac aattttatcg gtattatcca tctctgaggt
    13801 cattaccgca gccataaatt ctgccggata atgggctttt agccaaagtg tttggtaaga
    13861 aaccaacgca taagctgctg agtgagattt attaaagccg tagccggcaa acttttctac
    13921 caagtcaaaa atttgaccgg caagtttacc gtcaatccct ttggcttccg cccctttttc
    13981 aaacacttca cgctgtgcag ccatttcctc cggtttcttc ttacccattg cacggcggag
    14041 taagtccgct ccaccgagtg tataaccggc aagctcttgt gcaatttgca taacctgttc
    14101 ttggtaaaca atgaccccat aagtcggctc gagaataggt tttaagcatt cgtgttggta
    14161 ttgcggatca ggataagaaa cctcttcttt gccgtgttta cggtcaataa agttctgcac
    14221 catacctgat tccagcggcc ctgggcggaa tagtgccacc aatgcgataa tatcttcaaa
    14281 acagtccggc ttcaggcgag aaattaagtc tttcattccc cgtgattcaa gctggaatac
    14341 tgctgtagtt ttagctgcca gcaacagagc aaaggatttt ttatcatcaa gcggaatggt
    14401 ttcaatccga atcggctctt tgccttcacg agccaaacgt tcgttaatca tctccaacgc
    14461 ccatttgatg atggtgagcg tacgcaagcc taagaagtca aacttcacca atcctgcata
    14521 ttccacgtca tttttatcaa aatgggtaac cgggtgtaag ccctcgctat cgcaataaag
    14581 cggcgaaaaa tcggtaatcg cagttggggc gatcaccaca ccaccagcgt gtttacctgc
    14641 attacgagtt acaccttcga gcttacgagc catatcaata aggtctttca cctcttcatc
    14701 ggcttcatat agctcaggca attttggctc agcggcaaag gctttttcaa gcgtcattcc
    14761 tggatcgggc ggaatgagtt tggagatgcg atccacaaag ctataggggt gtccaagcac
    14821 tcgccctaca tctcgaatga ccgctttcgc cgccatagta ccgaatgtga taatttgcga
    14881 taccgcttgt cgcccgtagg tttccgcaac gtgttcaatc acacggtctc gcccgtccat
    14941 acagaaatca acgtcaaaat cgggcattga aacacgctca gggttgagaa aacgctcaaa
    15001 aagcaaatca aattccaatg ggtcaagatc ggtaatcttc aacgcataag ccaccaatga
    15061 gcctgcccct gagccacgac ccggtcctac cggaatatca ttatctttgg accattggat
    15121 aaactccatc acgatcaaaa agtaacccgg gaaccccatt tggttgatca catctaattc
    15181 aacttgcaat ctttcgtcat aaaccgaccg cttgttcgcc ctttcctcag gatcagggaa
    15241 tagaaactct aaacgctctt ctaagccttc tttcgatttt tttaccaaga aatcttcggt
    15301 ggaaagctca ccggtcggga aatttggcag gaaatactcg cccaaacgca cggtaaccga
    15361 acagcgtttc gcaatttcaa ccgtgtttgc caatgcactc ggtaaatcgg caaacagctt
    15421 gcacatttcc tcttcagtac ggaaatattg tttcggtgag tattttttcg ggcgtttcgg
    15481 gtcgtctagg gtgtagctgt cgtgaatggc aacccgaatt tcgtgtgcgt caaagtcatc
    15541 ttctttcaag aagacaacat catttaccgc cactaacgga attgcatttt tttgtgaaaa
    15601 ttcgaccgct tgtttgatat agcgttcttc gtctgcccgt ccggtacggc aaacggaaag
    15661 gtaaaaatga ttcgggtaat attgctgata aaaagctaat ttttcttcag cttcttgtcg
    15721 gttttctttg agtaaggctt tacccacatc gcccattcgc ccgccggaaa gaatgatgat
    15781 gccctcattc agctctgcta accattcacg ttccaccatc ggaaattcca catagccttg
    15841 ctgataggct ttggacaaaa tttgggtaat attatggtag cctttgttgt tcttcgccag
    15901 taatgtcagc tcaaaataat cttcattgcc gctctcggtt ctaacataaa catctgcccc
    15961 gataatcggc ttaatccctg ctcccaatgc ttcgccatag aatttcacca acccgcaaaa
    16021 gtttataaaa tccgttaagc ccattgccac catattatta gcggcagcgg ttttaactaa
    16081 ggattttacc ttagctaaac cattaatcat tgagaaatca ctgtgaactt ttaaatgaac
    16141 gaaacgacaa tctgacatag gaatataatc taagtaaaga agtttcccct ctttagtaaa
    16201 gactgtcagg ttctaaaaag tgaagccttc tgtgaataat cccgttgggc gaatgttatt
    16261 cgcccctaca aacgagcatt attcttgctc agagttacat ttaaaatccg aatgtagggg
    16321 cgaattacat tcgccctttc agaacctaac aaccctgctt tatctaaaga agggagttaa
    16381 aattaatcac gttttttgct taacagccac caaacgatga tcaaacagag taggcttgga
    16441 attaatgctc caaccggtat aggtaaccaa gtggcaatta agcttaaatt gccaaacaca
    16501 atatttgcca catagaacat aaagccggca acaataccaa tcacaatttt cgcccccatc
    16561 gtactactac gaagcggccc gaaaataaag gagatcgcaa gtagcatcat caccgccatt
    16621 gagattggtt ggaatacttt tcgccagaag gtgatctcaa aacgtttcgg atcttgtccg
    16681 gtatctttta agaagccgac ataatctgcc aagcctgaaa tcgagagcga ctccggtttg
    16741 agtgaaacaa tgcctaattt gctaggggtt aaactggttt gccaaacttg atctggctgt
    16801 ttagcttgct ggatctgatt ttctcccaca gtcgattttt ccactttaga tagcacccag
    16861 cctttttcat cactgtaatt cgcagttcgg gcttttaaaa cagattgcaa ttcacgtttg
    16921 ttttgtcctt cgccgaattg ataaatcagt acgttatcta agcttttttc atttttaata
    16981 tgattaatat agataaatga attgccatct ttcgcccaaa acccgtcttt tgtggcaagc
    17041 attgagccgc cactttgggc aatcgaacgc atattacggg caaactgctc ggtttgtggc
    17101 acgccccatt cgccgataat catcgtaaaa atgactaacg gtaaggcagt tttcatcacg
    17161 gctaaaccaa tgcggaaacg ggaaaaaccg gaggcttgca tcaccaccaa ttcactaagg
    17221 ctcgctaggt tgcctaaacc gagtaatgag ccaagtaatg ccgcaatcgg gaaaaaggtt
    17281 tcgatatctc gtggaatagt taaaaaagta tagtatgccg cttttaagcc atcgtaagat
    17341 ccacgtccta catcacgaaa ctcttccaca aatttaataa tcgccccaag cccaatcaac
    17401 ataaacaggg ttaaaaaaat cgcggataaa atcgttttgc cgatgtagcg ttctaaaata
    17461 ttcattgaga aaaattgcat tatgccaccg ccttattggt taattttttt gcaccaaatt
    17521 gatagcgtaa cttagacata aatttactat cccacgcatt taaaataaca cctaaaacta
    17581 aaaaggcaac tgataccaac ggcattaaca cttccgcatt caacttgcct gatgcccctg
    17641 acgattttag cgagctttgt agtaagaaat agattaaata aagcaataac gccggcagta
    17701 gtttagcaaa acgcccttga cgagggttta cactactcat tggcaccgct aataatgcca
    17761 ttaacggtac agctaaaatc aaagcaagcc gccaatgaag ctcggctttt gcttccggcg
    17821 ttttggtttc cattaatttc ttgaaatcgg ctcgttgcac taatttctca tcagattcaa
    17881 cgtcttgata gcctaaataa gcagaataat tctcaaaatg tgaaatacgg aaatcggcac
    17941 tttgtggtgt accttcaaaa cgcttgctct ctgccaaggt taagacttga tccccatttg
    18001 gcaaaccttg caacgtgccg gattcagcaa caaccactga aggtttgttt ttcttctgct
    18061 gttccggctg gaaaacgtag atatcattta gactgttatt ttcaatttta tcaataaata
    18121 acacatagcc accggcagac ataaattgtc cggccgaaag agccgcaaaa cgtgggttgg
    18181 ctttcgcttc cgctaacatt tcactctgtt tattaattgc ccaaggcgta agccaaaaca
    18241 cgttataaac cgctaatgca gtggtaaaaa tcgagagaaa catcgccact ttaaccaata
    18301 gcccttgccc gataccacaa gcccgcatta cggtaatttc actttcggca taaaaccgcc
    18361 cgagggttaa taacaaggcg ataaacagtg agagtggcag cattaattgt gccattgtcg
    18421 gcatacctaa gcctaataag ctcaccacta aatctgccgg tactttacca ctcacagcag
    18481 aacttagaac acgcactaat tgctgacaaa aaaagatcag taataagata aacaatatcg
    18541 ccaattggct tttaaatatc tctttggtta aatatcggct taagatcacg ttttttctct
    18601 ataacattta caaatctgaa taccgctaaa cacaagcggt ctatttttgt taattttttg
    18661 caaagagcgc aaaataactt attcgaatcg ctaataatac ctttttcata caaaaaaatc
    18721 acctatagaa aatatcacgc acggcaaaac cgtgcgtaag tattattgtt ttttcgattt
    18781 tttcgatgat gttgctttat gagcttcaag aattaatttc ttaccttggc tatcttcaat
    18841 ttcaatctta ggtggtgctt ccgtattttg atgaaggata gctataatat tttcaccttg
    18901 tgcaatatct tcaaagtttc ctttcacacg taacttagcc gcatcaacac tagtgtcaaa
    18961 tactaagaat gtacctaatg cggtaactct aatattttta agccctatat tgtccttcgt
    19021 taccgtttta tattgaggtg cttttttccc ttttgcagcc ataatcttct cttgattagt
    19081 cgcaatatta agaatatttt gaactttagt cgcttctgct gtagattgtg cctgttctgt
    19141 taaatttggt tctccatcaa aaataacatc cccaacaaat tgcacctctt taggctcatt
    19201 ttgcaataat ggtgcaacgt ctttagctga aacaaccaaa aataaccgtt cacctatttt
    19261 ttcaaaacgg acatcaatat tggttaattg tgattcaatt tgttcattaa ttgtcttgat
    19321 cgcagtttct gtctcatttt gaagcgatat tttacgtgta atatcaacat cataagcaat
    19381 aaaaccaact tttaaacgtt gtgataactg ctgaagtaaa ttgcccacat ttccatcata
    19441 agaaagacgt aactttgcct gctcatagcg actaatttga gcatcatcat tagcgaaaat
    19501 agtgttttga gtccctaagc cgattagacc aacaacaaac gttttacccc aaaagcgcat
    19561 catttttatc tccaattatt ctcttaaatc taaaaaactc ttttagtata aagtaagcaa
    19621 actaaaagaa aaaccagtaa aattatctat acgaccgcaa aaaacattta atatttgcaa
    19681 ataaaaagta aattatttta aataatgatt tacatcaggg tatatctata ttttacttat
    19741 cattgatgat tatgttggca ttataaaatc tgtagcaata aaaattaagg aggaaaaatg
    19801 gaatttagtg tcaaaaatgg cagtgttgag aaacaaagaa ccgcctgttt ggttgttggt
    19861 gtctatgaac cccgccgatt atgttctgcc gcagaacagc ttgataaatt aagtaacggc
    19921 tatatcagca cattactgag aagaggagat ttagaaggca aagcagggca aaccttactc
    19981 ttgcataatg tgccgaatgt actcgctgat cgagtattat tagtcggctg tggaaaagag
    20041 cgtgaattaa ctgaacgcca atacaaacaa attattcaaa aaagtgtaca aactattaat
    20101 gaaaccggtt caatggaagc tgtcagcttt ttaaccgaac tgcacgttaa aggtagaaca
    20161 ccttattgga atgtgcgatt tgcggtagag gcaatccaag aacaactata tgcctataac
    20221 gatttcaaaa gcatcaaacc tgaagttcgc cgtgaattac gccgtgtgat ttttaatgtc
    20281 gcacaccgta aagatcttcc tgatgccgaa cgagctttag aacacggaaa agccgtagca
    20341 cttggaatca gccacgctaa aaatgtagca aattgtccgc ctaatgtgtg taatcctcac
    20401 tatttagccg aattggctaa gggtttagcc tacgactatc ctgccatttc aactaccatt
    20461 gttgatgaaa aacagatggc agaattggga atgaatgctt acttagcggt ttccagagcc
    20521 tctgaaaatg aggcctttct ttcagtgatt gaatataaag gcaacccgaa tgctgatgcg
    20581 aagccgatta tcttagtcgg caaaggaatg acctttgact ctggcggttt atccattaaa
    20641 cctgcggagg cgatggacga aatgaaatac gatatgtgcg gagctgctac tgtttacggt
    20701 acaatcaaag caattgccga gatgaaatta ccactcaatg ttatcggctt actcgccggc
    20761 tgtgaaaatg cggttgatgg caaagcctat cgaccggggg atattctcac tacaatgtct
    20821 ggtttaaccg ttgaggtact caacaccgat gcagaaggac gtttagtgct atgtgatgct
    20881 ctcagctatg tagaacgttt tgaaccggaa ttagtgattg atattgctac cctaactggt
    20941 gcttgcatga ttgccttagg taatcataac agcgggctga tgtcacctca taacggttta
    21001 gcaaacgaac tcttagctgc cgcagagcaa gccgatgaca aagcgtggcg tttaccttta
    21061 ggggaagaat atcaagaaca gttaaaatct aactttgctg atcttgctaa tatcggcgga
    21121 cgtttaggcg gagcctgtac tgccggtcaa ttcctctcta actttacaaa gaaatatact
    21181 tgggcgcatc tagatattgc cggcacggct tggaaatctg gggcagccaa aggggcgacc
    21241 ggcagaccgg tatccttact aacacaattt ttgatcaata aagcccaggt ctaactctca
    21301 caagcggtct gattttatcg agtttttgca aaaagaaaat cagaccgatc ctcttcatac
    21361 gcccctatat tctttttagt tatatcaaat aaattccagc tactagaaaa gcgattaaaa
    21421 ataagtatga taaatcccaa tctcaatact tattaaggaa tatcactatg actatctatg
    21481 cagacaactc atactcaatc ggcaataccc cgctggtgcg tttaaagaat tttggcaacg
    21541 gcaatattgt ggtaaaagtg gaagggcgta acccaagttt tagcgtgaaa tgccgtattg
    21601 gtgcgaatat ggtgtggcaa gcagagaaag acggtattct aaccaaagac aaagaaattg
    21661 tagatgcaac cagcggtaac actggaattg ccttggctta tgtagcagcc gctcgtggtt
    21721 ataaattaac gctcacaatg ccggaaacaa tgagtaccga gcgtaaacgc ttattgcgtg
    21781 gcttaggagt aaatttagtc ttaaccgaag gggcaaaagg aatgaaagga gcgattgcga
    21841 aagctgaaga aatcgcggct tccgacccag atcgctatgt taccttaaaa cagtttgaaa
    21901 acccggcaaa cccggcaatt caccaacaaa ctaccggtcc tgaaatttgg gatgcaactg
    21961 aaggtaaaat tgatgtatta gtggcaggcg taggaacagg tggcactatt accggtgttt
    22021 cccgtgctat taagcaagat aaaggcaagc aaattatttc agtggcggta gaaccgagtg
    22081 aatcgccggt cattacgcaa actttaaacg gtgaagaagt caaaccgggc ccgcacaaaa
    22141 ttcaaggcat tggtgcaggc tttattccga aaaacttaga tttatcactg cttgaccgtg
    22201 ttgaacaagt ttcaagcgaa gaagcgatta caaccgcacg ccgtttaatg gcagaagaag
    22261 gcattttagg cggtatttca tcaggtgctg ccgttgctgc cgcagatcgc atcgctaaac
    22321 tacctgaatt tgccgataaa ttaattgtag tgattctgcc ttcagcctca gagcgttatt
    22381 taagtacgct actgtttgaa gggattgaag cgtaatatta aattaatata aaaatgccgg
    22441 ctgatgtcgg catttttatt gcaaacaagc ggttattttt tataaaaaat ttgcaatttg
    22501 tctcctattg cgttattctt cgccacatct ttacggttgg ccgtatctaa tcaatatcaa
    22561 caaatccaat cttaattaat cacaatttta cattcaaatt atgcatctta ctcaacttaa
    22621 aaacacccct gtttcaaagc ttgtggaaat gggtgaaaat caaatgggct tagaaaatct
    22681 ggctcgttta cgtaaacaag acatcgtatt tgctattctt aaacaacacg caaaaagcgg
    22741 tgaagacatt ttcgggcaag gcgtgcttga aattctaccg gacggcttcg gtttcctccg
    22801 ctcatcagat agctcatatt tagccggccc tgatgatatt tatgtttctc caagccaaat
    22861 ccgccgtttt aacttacaaa ctggcgataa aatagaaggt aaaattcgcc caccaaaaga
    22921 gggagaacgc tattttgccc tactgaaagt tgattcagtt aatgatgaca aaccggaagc
    22981 ctctcgcagt aaaattctct ttgaaaactt aacccctctg cacgccaatt ctcgcttaaa
    23041 aatggagcgt ggcaatggat caaaagaaga tttaaccgct cgtattttag atttagccgc
    23101 cccaatcggt aaaggtcagc gagcgttaat tgttgccccg ccaaaagctg gtaaaaccgt
    23161 gttactgcaa aatattgcac aaagcatcac ccataatcat cctgaatgtg agcttatcgt
    23221 attattaatt gatgagcgtc cggaagaagt aacagagatg caacgcaccg tacgtggtga
    23281 agtaattgcc tcaacctttg atgaaccggc aacccgccac gttcaagttg cggagatggt
    23341 aatcgagaaa gcaaaacgct cggtagagca taaaaaagat gtggtgattt tattagactc
    23401 catcactcgt ttagcccgtg cctacaacac cgttaccccg gtttccggca aaatcctttc
    23461 cggtggtgtg gacgctaacg ccttacatcg tccaaaacgt ttcttcggtg cagcccgtaa
    23521 tgtggaagaa ggtggcagct taaccattat cgcaaccgca cttgtggata ccggatcaaa
    23581 aatggacgaa gtgattttcg aggagttcaa aggtacgggt aatatggaat tacacctctc
    23641 acgccgtatt gctgaacgcc gtatcttccc ggctattgac ttcaaccgct caggtactcg
    23701 taaagatgac ctcttaatgg cagcagacga actccaaaaa acttggatgt tacgcaaagt
    23761 cctcaaccca atggacgaag tagatgctat cgaatggcta atcgacaaat taatgatggc
    23821 aaaaactaac gaagagtttt tcgagattat gaaacgttcg tagaacataa aaaaatcccg
    23881 cttaacgcgg gatttttatc aatagcagct gtcaataaag taactactta aaatccccca
    23941 actcaaacaa ccccattgat ctcgccacat ttacataagt ataaagtgcc tcgattttgg
    24001 cttttcccgg tgttgccggc ttgccaccac caacggaatc catctcaatc ggataaccaa
    24061 tgtgctgtgc ataacctttg agaaccgctg ttgcacgagg gatatgttgt aacgtaccga
    24121 tacctaatac tttcttgcca ttataagttt gcatcagctt gataatccca accgcatttc
    24181 ccggggtatc tctggcaaca ggatcaagta gcaaacggtc tttttcaata ccattttcgc
    24241 taagccattt tgccatcaca tcagcctcag caaattccgt tttcacagca ccgccactga
    24301 cgataatttt tgcttgcgga aatttttgtg ccatctcttt ggttttctgt aatcgatcta
    24361 acaacagcgg cgaaggtgtg ccgtctttgt ttggcgtaga accaaaaacg gcaatcgtat
    24421 cagggatcat tgctgtctgt ggttcattac cgtagcttgc cgccagcgtt tgttcggtaa
    24481 aggcaaaaaa gtctgtcatt cgttgtgcga cttcgggagc aagctgtttc agtgcagaaa
    24541 gacgagccgt ttcttgttca gtatcttcta gcacccttga agctaatact gtcatcgcaa
    24601 gagcgtgaat atcacggggg ttttggcgca aaatttggtc gagctgagaa agtgcttccc
    24661 gatactcttt attgacgaaa tacgcctctg cttgtaaacg gtaagtgtta aggtaggtcg
    24721 gcttctcttt aactttctga tcaagcgaag catacatcgc ttgccaatac caacggcgga
    24781 aattcagcac atcctctttt agataagggt catcaacata gtctggcgca tattgaataa
    24841 ctaaatgctc aatcggcgct cctcgaccat cttctttacc ttttggtgca ggcagtactt
    24901 ttgctaatac aaagttaaac gccttatcat attgactgat attgtcttgg ctcaaataat
    24961 cagctggtat cgcccagcta tttacactta tcaaagaaag gcttaaagca agggcagaaa
    25021 gggttgtttt gatttttttc atagaggctc ctatttacca ttgatagtga taatttgcgt
    25081 gtaatccgta tgaacgcttc aatgcatccc cgtgtaacat tgatccttcg attgcaaaat
    25141 aatggcgatt tccaactgct tgtatcccaa tactgattac attccgatga cgatcagata
    25201 aactatctaa ggtatcaata tgacgatttc gaaaacgata gctaatatca gcataaggtt
    25261 taagtttgat tgcattgagt tcaatcactt ttcctaaacg tagccctgtc ccagcccaaa
    25321 acattcgtgc tgatccagct tttgcccagc ctaattgcag ctttggcgta atttgccatt
    25381 gatgactcat cacgatattt cttccaattt cactactcag actgtatgca ttattatctc
    25441 gttttgttac accagattga ttagtaaaat gactgtaatt aaaaaaattt gtccaaaaca
    25501 gaccacttgt aggacgataa ccagcataaa taccagcaga tgtccctttc actttatgcg
    25561 tcctattctc aatttgcccc tgactgatac caaatactcc accaatagac caattatggg
    25621 aaacctgatg atctagcccg atatgtaata agtgatagtc ttcggttgaa cgatttttta
    25681 aacgatattt ggatagacta tccgaaagcc ataaattcca atcttgtgta tgttctattt
    25741 ctgctaacct acggtacaga tcataagttg cttgttccat caaattaagc tgtacaacat
    25801 aatgctcgga aaaaggattg ttctgcttta ttattaaacg actaagggct tccgtactct
    25861 gttttaactg ctcttgcgtt ttactaagtt ctttattcaa ttcctcttca gcttgctgat
    25921 gagcctgttt tgctgtttct aacgcctgtc tggctacttc cagctcattt gcagaatttt
    25981 ctgcattttt tactgcttga tctcgctcag ctaccaattt ttctaaataa ttctgctgtg
    26041 ctttttccaa cgcttctctt tgttcttttt cagcttgttc tttggcaagc aaattctcaa
    26101 aatcgcccaa ggtaaataac cccattgcac gagcaacatt aacaaatgta taaagagctt
    26161 cacctttttt atttttttca ttaggaggag aaccgcctcc ggcagaatca atttccaatt
    26221 catatccaat ggaatccgca tagcttttca atacagacat tgctctcggt aaatgtaaga
    26281 tcgtaccgat ccccaatact tttctacctc catattcctt cataaaatca atgataccga
    26341 cagcatttcc cggagtatct cgtgccacat catcaagcaa cagtctgctt tcatcaacgc
    26401 cattctctat caaccatttt ttcattacat ccgcttctgc atagatataa cgaacaggtc
    26461 caccacttaa aataattttt gcattcggaa atttctctgc catttctttg gttttctcaa
    26521 gacgttgcaa taatcccttg cttggagtac cgtctgggtt aggcgattgc ccaaataccg
    26581 ctatggtgtc ggggatcatt gttgtttgag gctcactacc atagctggca gcaagcatag
    26641 tgtctgtaaa atgtagatat tgctgcacct tttgcgcaat acttggagag atttgataaa
    26701 gcgctaataa acgctcggct tcagtattag gattttccaa tacccgactt gcaaccacac
    26761 tcattgccat tgcatgaaca tcattagggt tacgccgcag aatttgatcc agttgagata
    26821 atgcttcttg gtattgctta ttgataaagt acgcttccgc ctgtaatcgg taagtattta
    26881 aataatcggg cttttgtttc gtttttaaat ccaatgacgt atagagatct tgccactgcc
    26941 aacggcgaaa acgaataaca tcctctttaa gatagatatc attaagataa tctgatgcat
    27001 atttcaccac caaattctca atcgcttcac cacgcccatc tgcttttgca ataggcgcag
    27061 gtagtggatt tgcgaggaaa aaattaaaac gggcatcaaa ttgccgaata ttatcgttac
    27121 ttaaataacc gtcagcataa gccgataaag gtaaggctga acctaatatc aaagcaagat
    27181 aagaataacg caagcgtttc attatgattt ctccttatat tgggtgaaga agtatttata
    27241 actttttaca tctaaccaac aaagt
//
LOCUS       DANLTI010000017        26145 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.017, whole genome shotgun sequence.
ACCESSION   DANLTI010000017 DANLTI010000000
VERSION     DANLTI010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26145
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.017"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            39..1031
                     /locus_tag="PXB09_000595"
     CDS             39..1031
                     /locus_tag="PXB09_000595"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDL5232743.1"
                     /translation="MKKSFILQQQEISFVKNTFTQYLIDKLGIIEVQGPILSEVGNGM
                     QDNLSGIEKAVKVNVKCIPSATYEVVHSLAKWKRHTLARFGFKEGEGLFVHMKALRPD
                     EDSLDRTHSVYVDQWDWEKVIPEGRRNFDFLKETVNEIYKAIRLTELAVEARFDIPSV
                     LPKQITFVHSEDLVQRYPNMTSKERENAICKECGAVFLIGIGGKLSDGKPHDGRAPDY
                     DDWTTESEQGYKGLNGDILVWNEELGTAFELSSMGIRVDETALRLQVALTGDEDRLEM
                     DWHKDLLAGRLPLSIGGGIGQSRLVMFLLRKKHIGEVQSSVWPKAVFEEFENIL"
     gene            complement(1155..1574)
                     /gene="atpC"
                     /locus_tag="PXB09_000596"
     CDS             complement(1155..1574)
                     /gene="atpC"
                     /locus_tag="PXB09_000596"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDL5232744.1"
                     /translation="MASQFELTVVSAERKIFEGTVTSVRVSGTDGELGVYAGHAPLLT
                     AIKPGMVKFTLADGKEEFIYVSGGFLEVQPTVVTVLADTAIRGEELDEQRILAAKRKV
                     EETLSKTSDADMTAKLAREIAKLRVYELTKTKLANKR"
     gene            complement(1602..2975)
                     /gene="atpD"
                     /locus_tag="PXB09_000597"
     CDS             complement(1602..2975)
                     /gene="atpD"
                     /locus_tag="PXB09_000597"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDL5232745.1"
                     /translation="MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQL
                     GGGVVRCIALGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEE
                     ERWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMEL
                     IRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA
                     LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL
                     QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDP
                     LDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDDKRLVARAR
                     KIERFLSQPFHVAEVFNGVPGKFVPLKETIRGFKGILEGEYDHIPEQAFYMAGSIDEV
                     VERAKQM"
     gene            complement(2996..3862)
                     /gene="atpG"
                     /locus_tag="PXB09_000598"
     CDS             complement(2996..3862)
                     /gene="atpG"
                     /locus_tag="PXB09_000598"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDL5232746.1"
                     /translation="MAGAKEIRTKIASVRNTQKITKAMEMVAASKMRKTQERMAASRP
                     YAESIRKAISHIAKGNIEYKHPFLTPRPVKKVGYLVVSTDRGLCGGLNINLFKTVLHE
                     LKEKDDQGVKSRLAVVGNKGISFFNPMGLEIKGHINGLGDTPAMEDLVGIVNGMVNAY
                     REGEIDEVYVVYNRFINTMSQKPTVQQLLPLPALENDSLEQTGSWDYLYEPNPQALLD
                     SLLVRYLESQVYQAVVDNLASEQAARMVAMKAATDNAGNLINELQLVYNKARQASITN
                     ELNEIVAGAAAI"
     gene            complement(3888..5429)
                     /gene="atpA"
                     /locus_tag="PXB09_000599"
     CDS             complement(3888..5429)
                     /gene="atpA"
                     /locus_tag="PXB09_000599"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDL5232747.1"
                     /translation="MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGL
                     SDVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRG
                     LLGRVVNTLGQPIDGKGEIQNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAL
                     ANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGG
                     IRTALAQYRELAAFAQFASDLDEATRKQLSHGQKVTELLKQKQFEPMSVAQLGLSLAA
                     AEYGYLDDIPVERVGSFEANLLAYAQSNYGEFMQELSKSGNFNDEIKDKLNEILSGFK
                     KNSAW"
     gene            complement(5442..5975)
                     /gene="atpH"
                     /locus_tag="PXB09_000600"
     CDS             complement(5442..5975)
                     /gene="atpH"
                     /locus_tag="PXB09_000600"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDL5232748.1"
                     /translation="MSELSTVARPYAKAAFDFALEQGQLEQWQQMLTFSAAVANDEQV
                     ASFLNSSLASGQISETFIKICGEQLDQYGQNFIRVMADNKRLAVLPAVLNAFLELRAE
                     QESIKDVEVVSADKLTDAQEAKIANAMEKRLGTKVRITSSIDSSLIAGVIIRYDDVVI
                     DGSSRGQLNRLSQELSL"
     gene            complement(5989..6459)
                     /gene="atpF"
                     /locus_tag="PXB09_000601"
     CDS             complement(5989..6459)
                     /gene="atpF"
                     /locus_tag="PXB09_000601"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDL5232749.1"
                     /translation="MNLNATLIGQLIAFALFVAFCMKFVWPPLIRVIEERQANIASAL
                     ASAEKAKQEQADSKAAADQEILRAKEEAQNIIDLATKRRNEILESVQAEAEVERQRII
                     EQGYAEVESERKRVQEELRQKVAALAIAGAEKIVGRSVDAAANNDIIDKLVAEL"
     gene            complement(6520..6774)
                     /gene="atpE"
                     /locus_tag="PXB09_000602"
     CDS             complement(6520..6774)
                     /gene="atpE"
                     /locus_tag="PXB09_000602"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDL5232750.1"
                     /translation="MESVITATIIGASILLAFAALGTAIGFAILGGKFLESSARQPEL
                     ASSLQTKMFIVAGLLDAIAMIAVGISLLFIFANPFIDLLK"
     gene            complement(6892..7680)
                     /gene="atpB"
                     /locus_tag="PXB09_000603"
     CDS             complement(6892..7680)
                     /gene="atpB"
                     /locus_tag="PXB09_000603"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDL5232751.1"
                     /translation="MAGTTAEYISHHLSFLSTGEGFWAVHLDTLFFSLVAGAIFLWVF
                     SRVAKNATTGVPGKLQCFVEIVIEWVNGLVKDNFHGPRNVIAPLALTIFCWVFIMNAI
                     DLIPVDFLPQLANLFGIHYLRAVPTADISATLGMSICVFALILFYTVKSKGFGGLVKE
                     YTLHPFNHWAFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYMADNFA
                     LQALGIPLHLVWAIFHILVITLQAFIFMMLTIVYLSIAYNKADH"
     gene            complement(7703..8086)
                     /locus_tag="PXB09_000604"
     CDS             complement(7703..8086)
                     /locus_tag="PXB09_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDL5232752.1"
                     /translation="MSAVINRAKSQYKQALKVEFFLLCVFALGVSLWKMNFNFSFLGG
                     ALASFLPHLVFVYWVFFKKSAKNQSKMTAFYRGEGMKWLVTIILVIGCFKLIPALDVV
                     LFFVGYFIALFLNNMIPFVLSKHHH"
     gene            8554..9687
                     /gene="carA"
                     /locus_tag="PXB09_000605"
     CDS             8554..9687
                     /gene="carA"
                     /locus_tag="PXB09_000605"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDL5232753.1"
                     /translation="MFKPAILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILT
                     DPSYTKQIVTLTYPHIGNTGINLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYL
                     IQQNIVAIADIDTRRLTRILREKGAQAGCILVGDATEENIANALAFANSFGSMAGKDL
                     AQSVTCNELYKWTDGEWQLGKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVV
                     PAKTSAEAVLALNPDGIFLSNGPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGL
                     AAGGKTKKMVFGHHGANHPVQDLDSQKVLITSQNHGFEVDESSLPSNVRVTHRSLFDG
                     TVQGIELTDRPAFSFQGHPEASPGPNDVAYLFDRFVSEMKKVK"
     gene            9790..12996
                     /gene="carB"
                     /locus_tag="PXB09_000606"
     CDS             9790..12996
                     /gene="carB"
                     /locus_tag="PXB09_000606"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDL5232754.1"
                     /translation="MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     VLVNSNPATIMTDPNMADVTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDL
                     SKNGVLKKYNVELIGATEDAIDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEM
                     EVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAINPANGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNE
                     LRNDITGGLIPASFEPTLDYVVTKIPRFAFEKFANADDRLTTQMKSVGEVMAMGRTFQ
                     ESLQKALRGLETGICGFNLLSEEPEKIRRELANPGPNRILYVADAFGAGFSLEEVHHY
                     SKIDPWFLVQIQDLVLEELALEKKQFSDLDANEIRRLKRKGFSDKRIAQLTKVSEKMV
                     RDYRHTYAILPVYKRVDTCAAEFASDTAYLYSTYEEECEAKPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHASLALREAGYETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RVENPWGVIVHYGGQTPLKLANALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLK
                     QPANRTARNALEAVALANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSN
                     DSPILLDHFLNNAIEVDVDCICDGENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGH
                     VLDEIRKQTNAMAFALGVKGLMNVQFAVQNEVVYVLEVNPRASRTVPFVSKATGRPLA
                     KIAARVMAGETLADLNALEEIIPSKFFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGI
                     GNTFAEAFFKAQLGAGERIPKVGKVFMSVIEEHKPALIYIAKRFQEQGYGLCATFGTA
                     NFLRQHGIAVQTVNKVREGRPHIVDAIKNGEIALVINTVSGEPEVIADSHSIRRTALQ
                     QRVPIYTTLAGADAISYGVKHINEFDVYSVQELEQKAN"
     gene            complement(13071..13862)
                     /locus_tag="PXB09_000607"
                     /pseudo
     CDS             complement(13071..13862)
                     /locus_tag="PXB09_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            14065..15063
                     /gene="yiaK"
                     /locus_tag="PXB09_000608"
     CDS             14065..15063
                     /gene="yiaK"
                     /locus_tag="PXB09_000608"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDL5232755.1"
                     /translation="MRVSYEELKAQFKRVLLARNVREEIAEECATVFADTTQAGAYSH
                     GVNRFPRFIQQLENGDIVPEAVPTKVLSLGAIEQWDAHQAIGNLTAKKMMDRAMELAS
                     ENGIGVVALRNANHWMRGGSYGWQAAEKGYIGICWTNALAVMPPWGAKECRIGTNPLI
                     IAVPTNPITMVDMSCSMYSYGMLEVHRLAGRQTFVDAGFDDDGNPTRDPATVEKNLRL
                     MPMGFWKGSGLSIVLDMIATLLSNGESTAAVTEDKDDEYCVSQVYIAIEVDRLIDGKT
                     KDEKLNRIMEYVKTAERADPDVAVRLPGHEFTQILADNKANGIPVDDTVWAKLQAL"
     gene            15188..15553
                     /locus_tag="PXB09_000609"
     CDS             15188..15553
                     /locus_tag="PXB09_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5232756.1"
                     /translation="MFFGHISQVKANRYPPAIQIALNYLKNTDFDAMEAGVYELKGRQ
                     IYVQVLDLNTKSKHEFQPEVHRNYLDVQYLHRGKEIMAAAVDTGTNPIAMEYNPERDI
                     QYYQSVANENEFRCVEGNF"
     gene            15617..16096
                     /locus_tag="PXB09_000610"
     CDS             15617..16096
                     /locus_tag="PXB09_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5232757.1"
                     /translation="MKALAQLVGKLLEILVVVILSAMSILVFVNVVLRYGFNSSISVT
                     EEVSRYMFVWLAFLGAVLAFSENQHVKVTMLTDKLSPTARNILSVVTDLAMLFCCYLI
                     VDGSWIQFNLNLNNFAPISGLPQGITFLASTVAGVLIGLLIIARIVATVGVIAKGEK"
     gene            16097..17374
                     /locus_tag="PXB09_000611"
     CDS             16097..17374
                     /locus_tag="PXB09_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDL5232758.1"
                     /translation="MTVVIFLSVLLGSILLGIPVAFALLVCGVALMLHLDLFDAQILA
                     QQIVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILAAM
                     IMASLSGSAVADTAAVVAMLLPMMKTTGYPIDRSAGLIGTAGIIAPIIPPSIPFIVFG
                     VASGVSITKLFLAGIFPGIMMGICLAALWWWQAKRLDLMTFSKATKEELCISFKNSIW
                     ALLLPVIIIGGFRSGMFTPTEAGAVATFYALIVSLFVYREMKFKDLYKVVLAAAKTTA
                     VVMFLVAAANVTGWLITVAELPMMLTELLEPLIESPTTLLLVIMLAVFIIGMVMDLTP
                     TVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQA
                     AKGVMPYLVMMICLLLLFVFFPSLVLVPLSWMQ"
     gene            17477..18463
                     /locus_tag="PXB09_000612"
     CDS             17477..18463
                     /locus_tag="PXB09_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5232759.1"
                     /translation="MKLFNLKTLFALVAGVAVMSGSAMAETSLRFGYEAPRSDTQHIA
                     AKKFDELLAAKTKGEIKLKLFPDSTLGNAQTMISGVRGGTIDIEMSGSPNFTGLEPKL
                     NVIDIPFIFKDREHVYKVLDGEVGQGLLKDLEAQGLKGLAFWDVGFRAFSNSKHPVTK
                     PEDIKGLKVRTNQNPMYIQAFTLLGGNPVPMPLSELYTALETRAVDAQEHPIGIFWSA
                     KLFEVQKHLSLTNHGYTPLIVVMNKAKFDGLAPELQTALVEAAKEAGQFQRDLNVKNE
                     KEIIEKLRKQGIEVIEQVDNAPFKAAIEAEVRKAFVEKHGDELLKKVDALAQ"
     gene            18537..19520
                     /locus_tag="PXB09_000613"
     CDS             18537..19520
                     /locus_tag="PXB09_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5232760.1"
                     /translation="MKLFNLKTLAAFVAGFALFSTAQAETSFRFAYEAPRSDTQHIAA
                     KKFNDLLQEKSQKGLKLSLFPDSTLGNAQTAISGVRGGTIDIAMSSSSNFTGLEPKLN
                     VIDIPFIFKDRDHAYKALDGEIGQGLLTALEAHGLKGLAFWEVGFRAFSNSKHPITKP
                     EDIKGLKIRTNQNPMYIQAFSILGANPVPMPLSKLYTALETKAVDAQEHPIGIFWSAK
                     LYEVQKYFSFTNHGYTPLIVAINKAKFDALPAEQQTALVEAAKEAGKYQRQLNLENEQ
                     KIIDSLKKAGIEFVDNLDTTPFKDAVSAETRKAFIEKNGDGLVKAIDALAK"
     gene            19651..21135
                     /locus_tag="PXB09_000614"
     CDS             19651..21135
                     /locus_tag="PXB09_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5232761.1"
                     /translation="MQHIIKRFGSHTAVNDVSLDIHSGEIVALLGENGAGKSTLIKIL
                     AGIYDRDEGDILFHNQKIQSAHAIEKGNKKPIAFIHQDLGLIEWMTIAENMAFVMGFP
                     RKFGLIDWAKVREQSQKALDFVGIKLSADTRVFDLSRTEKALLAIARAIAVNAEILVL
                     DEPTASLPASDVEHLFTVLNRLRSQGVGMIYVTHRLDEVIAISDRILVMRDGFPVAEG
                     QTKLYDVKGLVKAIVGEESRGRQRVDLPTDTPEILSLQNVVVGDTGPVNFRLHKGEMI
                     ALAGLRGAGQEEIGRLLFGERTLDKGEIQLDKRSYSAKDPQDAIAKGVALVAGDRTRE
                     SVFMSMTTSENLFINPVLSGHSPLKRYSRREEWGESWYKFQLFDIRPKNLFIDASALS
                     GGNQQKIVLARWMHLNTPVLILEDPTAGVDVGARAEIYDLLNKALAEGVAIIVISTDF
                     EEIAHLCNRALVFNRGEIAGELLNEEVTFANLLALASDSQSKKQ"
     gene            21330..22376
                     /locus_tag="PXB09_000615"
     CDS             21330..22376
                     /locus_tag="PXB09_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232762.1"
                     /translation="MAQTNIKSTALEQPVSIARDGFMAWFSQMSTRYGLLWLCVLLVI
                     IFSLTTESFASMLTLNAILESKSKIALLALAATTTMIVGKIDLNVGFGIVLWHILVIT
                     LQVQYGFSWYMAILIVLVIAALYGLLNGILVALADIDSFVATLGSGTVLYAVALWHSG
                     GRQIVGDLPDEFIALNSTEIFGIPISAFYVLAVAIVMWLVTEHTPTGRCMYAVGGNPT
                     AARLNGINIKKYTIVPFIVSSVITAFTGVLISAQQGVGQASVGMDYLLPALVGAFLGS
                     TTIRPGRINVWGTVVGIAILAIGISGIQQFGGAFWVEPLFNGATLLLSITIAGYAQRK
                     RLLNQKAVQKKSTN"
     gene            22389..23498
                     /locus_tag="PXB09_000616"
     CDS             22389..23498
                     /locus_tag="PXB09_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5232763.1"
                     /translation="MKKAFRTTLTAIATLTAIAFGNNAFANDDPFVQEAKQLVAAATA
                     KQEKWDGPTTGPQLQKEKTVIFIASDMKNGGVLGVIDGMKEAVGVTGWKLDVLDGAGT
                     VNNQLAALNQAIARKPDAIVIGGWNPNVAKIPLQKATKNGIKLAAWHATPEPGAIDKY
                     GIFYNVTSDSDEIARLSAMLAVAESNGKAKAIILTDSLYEIALRKANVMKEVIEKCKE
                     CKVLEFIDTPLADTSSRMPNLTFSLLQKYGDDLEYALAINDLYFDFMAPSLRTAGKDK
                     PFSISAGDGSVTAYQRIRNGDKQFATVPEPLNLHGWQLVDELNRAFANEKPSGYITPA
                     HLVTKENVAFDGGENNLYAPQNGYKGAYKAIWGVK"
     gene            23603..24493
                     /locus_tag="PXB09_000617"
     CDS             23603..24493
                     /locus_tag="PXB09_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDL5232764.1"
                     /translation="MSNKFIPKISNPRFNELVGNTFELEELFDKAIWAEGPAWSKPQQ
                     ALYFSDVKGCTMYRWTEQDGTQVFRQPSYFSNGNAFDANDNLITCEHGNRGISLTTPS
                     GEYRFLVGQLDGKRLNSPNDVVVKSDGIIWFTDPPYGILSDNEGKQSPSEIIGCYIYC
                     YDPKTDKLNIATFNTMRPNGLAFSSDEKQLFVADMSSVEFDEDGLHHLVVFDVDGNKL
                     KNRRDVAEISPGIPDGFRIKQNGVIFCSCEEGIIAILPDGTELGRFVLGKLTSNCSFG
                     DDEQTLFITCSNSVYRLTIK"
     gene            24565..26034
                     /locus_tag="PXB09_000618"
     CDS             24565..26034
                     /locus_tag="PXB09_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDL5232765.1"
                     /translation="MDNKMNYTLGIDCGGTFIKAALFDTQGNIQALHRENVSVISEQA
                     GYAERDMSQLWAICAEVVRSTIEKSGVNPADIKAVGISAQGKGAFLLDKQNRPLGRAI
                     LSSDQRSLEIVKQWQAEGIPQQLYPITRQTLWTGHPVSILKWVQQNEPERYAQIGAVL
                     MSHDYLRFCLTGELHCEETNISESNLYNMEKGEYDQQLADLLGMPDVLEKLPPVIEPN
                     KISGYVTENAAKLTGLAVGTPIVGGLFDVVSTARCANLDDETKLNAVLGTWSVVSGIT
                     DHIDASQSLPFVYGRYAEAGKFIVHEASPTSAGNLEWFVNQWKLDYVKINQAVAQLPP
                     AASSVLFVPFLYGSNAGLGMQAGFYGMQAHHTQAHLLQAIYEGVLFSLMSHLNRMFIR
                     FPKADVLRVTGGPVKSKVWMQMLADLTGMRLEIPQMEETGCLGAALMAMQGVGLDISQ
                     VQALNNEMQVFEPNPENYAAYQTKYQRYQKLTEALNTMI"
BASE COUNT         7508 a         5743 c         5712 g         7182 t
ORIGIN      
        1 aataaaaaat caacattctt taattaggaa agcaaacaat gaaaaaatct tttattttac
       61 agcaacaaga aatcagtttt gttaagaaca catttactca atatttaatt gataaattag
      121 gcattattga agttcagggg cctattttga gcgaagtcgg caacggtatg caagacaacc
      181 tttccggtat cgaaaaagca gtaaaagtaa acgtaaaatg tattccaagc gctacttatg
      241 aagtggttca ttctcttgca aaatggaaac gccacacctt agctcgtttt ggatttaaag
      301 aaggagaagg gttatttgtt catatgaaag ctcttcgccc tgatgaagat tctttagatc
      361 gcacacactc ggtatatgtt gaccaatggg actgggaaaa agtcattcct gaaggtcgcc
      421 gcaacttcga tttcttaaaa gaaacggtaa acgaaatcta taaagcaatt cgtttaaccg
      481 aattagcggt ggaggctcgt ttcgatattc catctgtatt gcctaaacaa attactttcg
      541 ttcacagcga agacttagtg caacgctatc cgaatatgac cagcaaagag cgtgaaaatg
      601 ctatctgtaa agagtgcgga gcggtgttct taatcggtat cggcggcaaa ttatcagacg
      661 gtaaacctca cgatggacga gctccggact atgatgactg gacaaccgag tccgaacaag
      721 gctacaaagg cttaaacggc gatattttag tttggaacga agaactcggc acagcctttg
      781 aactttcctc aatgggtatt cgtgtagatg aaaccgcctt acgcttacaa gttgctttaa
      841 ctggcgacga agaccgcctc gaaatggatt ggcacaaaga tttattagcc ggcagactcc
      901 cgctttctat cggcggcggt atcggtcaat ctcgcttagt gatgttctta ctacgcaaaa
      961 aacacatcgg tgaggtgcaa tccagtgtct ggccaaaagc ggtatttgaa gagtttgaga
     1021 atattcttta ataaaacaaa aaagcgaacc ttagggttcg cttttgcttt ctacaagcgg
     1081 tcttattttg caaaaaattt actgttttta accgcttgta aaacaaaacc ccactttcgt
     1141 ggggtttttt gatattaacg tttattcgct aatttggttt tagtgagttc gtaaacacgc
     1201 agtttcgcaa tttctctcgc taacttcgcg gtcatatccg catcgctggt ttttgaaagt
     1261 gtttcttcta ctttgcgttt tgcggcaaga atacgctgtt cgtctagttc ttcaccacga
     1321 attgcggtat cagccaacac tgttactacg gtcggttgta cttcaaggaa accacctgaa
     1381 acgtagataa actcttcttt gccgtcagct aaagtgaatt taaccattcc cggtttaatt
     1441 gcggttaata acggtgcatg ccctgcatac acccctaatt caccatctgt ccctgaaaca
     1501 cgcacgctgg taactgtgcc ttcaaagatt ttacgttctg cactcactac cgtgagttca
     1561 aattgagatg ccatgttgtt ctcctttagt ttagaacaaa attacatctg ttttgctctt
     1621 tcaaccactt cgtcaattga acccgccata tagaacgctt gttccggaat atggtcgtat
     1681 tcgccttcta aaatgccttt aaagccacga attgtttctt ttaacggtac gaatttgccc
     1741 ggtacgccgt tgaatacttc cgcaacgtgg aatggttgtg aaaggaaacg ttcgatttta
     1801 cgcgcacgag caacaaggcg tttgtcgtct tccgataatt catccatacc caaaattgca
     1861 atgatgtctt ttaactcttt ataacgttgt aatgtacctt gtacaccacg agcaacgtta
     1921 tagtgttcct caccaaccac gagtggatct aactgacgag aggttgagtc aagagggtca
     1981 accgccgggt aaataccgag tgaagcgata ttacggctta ataccaccgt tgagtctaag
     2041 tgggcaaagg tagttgccgg agacgggtca gttaagtcat ccgccggaac atataccgct
     2101 tgcacagagg taatagagcc ggttttggtt gaggtaatac gctcctgtaa tacgcccatc
     2161 tcttctgcaa gagtcggctg ataacctacc gcagacggca tacgacctaa taacgcagat
     2221 acttcggtac cagctaaagt ataacggtag atgttatcca cgaagaataa tacgtcacga
     2281 ccttcatcac ggaatttttc tgccatggtt aagccggtta atgccacacg cagacggttg
     2341 cccggtggtt cgttcatttg accgtaaacc agcgatactt tgtctaatac gttagagtct
     2401 ttcatttcgt ggtagaagtc attaccctca cgagtacgct cacctacacc ggcgaatacc
     2461 gagtaaccgc tatgttcgat agcgatgtta cggattaact ccatcatatt tacggtttta
     2521 cctacacccg caccaccgaa taagccaact ttaccaccct tagcaaatgg agcaactaag
     2581 tcgataactt tgataccggt ctctaaaagc tcggtgctgt tcgcttgttc ttcgtagctt
     2641 ggtgctgcac ggtggattgt ccaacgttct tcttcaccga ttgggcctgc ttcatcaatt
     2701 ggctcaccta atacgttcat aatacgaccg agtgtttttg taccaaccgg tacttcaatc
     2761 gctttattcg tattttcaac ttttaagcca cgttttaaac catcagatga accaagtgcg
     2821 atacaacgga ccacaccgcc acctaattgt tgttgaactt caagggttaa tcctgattca
     2881 acttttaatg catcataaac ttttggtact gcatcttgcg gaaactcaac atcgattacc
     2941 gcaccgatga tctgtacaat ttttcccgtt gccattaccg ttcctctatt cattgttaaa
     3001 ttgctgcggc acccgcgaca atttcattta attcattcgt aatacttgct tgacgagctt
     3061 tgttatacac taactgtaac tcattaatca gattacctgc gttatcggtt gctgctttca
     3121 ttgccaccat tcgagcagcc tgttcagacg caagattatc taccactgcc tgataaactt
     3181 gagattctaa ataacgaacc agtaagctgt ctaataacgc ttgtggattt ggttcataga
     3241 gataatccca agaaccagtt tgctctaatg agtcattttc cagtgcaggc aaaggaagca
     3301 actgttgtac tgtcggtttt tgtgacatcg tgtttataaa acggttatat accacataca
     3361 cttcatcaat ttcgccttca cggtaggcat ttaccatacc attaacaata ccgactaaat
     3421 cttccattgc cggtgtatca cccaatccat tgatatgacc tttaatctct agccccattg
     3481 ggttaaaaaa ggagatccct ttatttccca ccacagcaag tcgagactta acaccttggt
     3541 catctttttc tttcaattca tgtaaaacgg ttttaaataa attgatattt aagccaccac
     3601 ataaaccgcg atcggttgaa actactaaat agccaacttt ttttaccgga cgtggggtca
     3661 aaaatgggtg tttatactca atgttacctt tggcaatatg gctaattgcc ttgcgaatac
     3721 tttcagcata agggcgagaa gccgccatac gctcttgggt tttacgcatt tttgatgcgg
     3781 caaccatttc catcgctttg gtaatttttt gtgtattacg aacacttgca attttggttc
     3841 ttatctcttt agcacctgcc atattatttc tccgctaaaa agttagatta ccaagcactg
     3901 ttctttttga aaccagataa aatctcgttc aatttatctt taatttcatc gttgaaattg
     3961 ccggattttg acagttcttg cataaactcg ccgtagttac tttgagcata agctaataag
     4021 tttgcttcaa atgagccaac acgctcaacc ggaatatcat ctaagtaacc gtattcagct
     4081 gctgctaatg ataaacctaa ttgtgcaaca gacatcggct cgaattgttt ttgtttcaac
     4141 aattcagtta ctttttgacc gtgtgaaagc tgtttacgtg ttgcttcatc aagatctgat
     4201 gcgaactggg caaatgccgc taattcacgg tattgagcaa gtgcggtacg gataccaccg
     4261 gcaagcttct taaccagttt agtttgtgca gaaccaccta cacgggaaac cgagataccc
     4321 gggtttaccg cagggcgaat accggcattg aataagcctg attctaagaa aatctgacca
     4381 tcggtaattg aaattacgtt agtcggtacg aaggctgaaa cgtcacctgc ttgggtttcg
     4441 atgatcggta atgcggttaa agaaccggtt tgacctttca cagcaccgtt agtgaaacgt
     4501 tctacatagt ctgcatttac acgagacgca cgctctaata agcgagagtg tagatagaac
     4561 acatcacccg ggaatgcttc acgacccggt ggacggcgta ataacaatga aatttgacgg
     4621 taagcaactg cttgcttaga caaatcatcg taaacgatca acgcatcttc accacggtca
     4681 cggaagtatt cacccattgc acaacctgca taaggtgcaa gatattgtaa tgcagcagat
     4741 tcagacgcag aagccactac aacgatagtg ttcgctaatg caccgtgttc ttctaattta
     4801 cgcaccacgt tggcgatagt tgatgccttt tgaccgattg caacgtagat acatttaatg
     4861 cctgaatcac gttggttgat gatcgcatca atcgctaatg cggttttacc ggtttgacgg
     4921 tcacctataa tcaattcacg ctgaccacga ccgattggta ccattgagtc caccgctttg
     4981 taaccggttt gaaccggttg atcaaccgat tgacggtcga taacgcccgg tgcgatcact
     5041 tcgattggtg agaaaccgtc attttggatt tcgcctttac catcgattgg ctgacctaag
     5101 gtatttacaa cacgacctaa taagccacga ccaaccggca cttctaaaat acgaccggta
     5161 cattgtactt gcataccttc tgctaaatcg gcataaggtc ccattacaac tgcaccaaca
     5221 gaatctcttt ctaagtttaa tgcaatcgca taacgattgc ccggtaatgc aatcatttca
     5281 ccttgcatta catcagataa gccgtggata cgaataaccc cgtcacttac cgaaacgatt
     5341 gtccctgtgc tttgagcttc actcaccaca ttaaactggg caatacgttt tttaatcaat
     5401 tcactaattt cagttgaatt tagttgcatt ttttattcct cttacaagct caactcttga
     5461 ctcaagcggt ttagctgtcc acgactacta ccatcaatca ctacatcatc ataacgaatg
     5521 atcacacccg caattaatga actatctatt gatgaagtaa tacgtacttt cgttccgagt
     5581 cgcttttcca tcgcattggc aatttttgct tcttgtgcat ctgttaattt atctgcagaa
     5641 acaacctcaa catctttaat tgattcctgt tctgctctta attctaaaaa tgcattcaat
     5701 accgcaggta atactgctaa acgcttgtta tcagccatta cgcgaatgaa attttgccca
     5761 tattgatcta attgttcgcc acaaatcttg ataaacgtct cagaaatctg accgcttgca
     5821 agtgatgagt taagaaaact agctacttgc tcatcgttag cgacggcggc agaaaaagtt
     5881 aacatctgct gccattgttc caattgacct tgttctaaag caaaatcgaa agccgcttta
     5941 gcataggggc gagctactgt gcttaattct gacatctgcc cctcctagtt atagttccgc
     6001 aactagctta tcaataatat cgttgttcgc agcggcatcc accgaacgac ccacgatttt
     6061 ttctgcacca gcaatagcca atgcagccac tttttgacga agctcttctt gaacgcgttt
     6121 acgttcgctt tcaacttccg cgtaaccctg ttcaataata cgttgacgtt ccacttcagc
     6181 ttctgcttgt acagattcta aaatttcatt acgacgtttt gttgctaaat caatgatatt
     6241 ttgtgcttct tctttcgctc taaggatttc ttgatccgca gccgctttag aatcagcttg
     6301 ttcttgtttc gctttttcgg cagaagccaa tgcgctagca atatttgcct gacgctcttc
     6361 tatcactcga attagcggtg gccatacaaa cttcatacag aacgcaacaa aaagtgcgaa
     6421 cgcaatcagt tgaccaatta gtgttgcatt taaattcaca acgccctcct aaaagccggt
     6481 aaagttattc aactgaataa cggttaatca aatcccgact tatttcaata aatcaatgaa
     6541 cgggtttgcg aagatgaata gtaatgaaat acctacagcg atcattgcga tagcatctaa
     6601 aagaccagca acgataaaca ttttagtttg taagcttgat gctaattccg gctgacgtgc
     6661 agatgactct aagaatttgc cacctaagat agcaaagccg atagcagtac caagagcagc
     6721 gaaagctaat aaaattgaag caccaataat tgttgctgtg attactgatt ccataatgtt
     6781 ctccattaga ttgaggaatt agcccgaagg ctgggttgtt gataaaaata catatcaagc
     6841 ggtcaatatt ttgcaaaaat ttgcgaaaaa cctaccgctt gtaaggctag tttaatgatc
     6901 cgctttgtta taagcgatac tcaaataaac aatcgttagc atcataaaaa taaaggcttg
     6961 aagcgtaata actaaaatat ggaaaatcgc ccaaaccaag tgtaatggaa tccccaacgc
     7021 ctgtagagcg aagttgtctg ccatatacat tactgcaata aggataaaga ttaactcacc
     7081 tgcatacata ttaccgaata aacggaacgc caatgaaatc ggttttgcca aaagcgttac
     7141 cgtttcaaga ataaagttta ccggaatgaa tgcccagtgg ttaaacgggt gtaacgtgta
     7201 ttctttcact aaaccgccaa aacctttcga tttcaccgtg taaaataaaa ttaacgcaaa
     7261 tacacaaata gacataccca gtgttgcact aatatctgcc gttggtactg cacgcaaata
     7321 gtgaatacca aacagattgg ctaactgtgg taagaaatcg accgggataa ggtcgatcgc
     7381 attcataata aacacccaac agaaaatcgt taatgctaat ggtgcaatta cattgcgagg
     7441 tccgtggaag ttatccttca ctaaaccgtt tacccactca ataacaatct caacaaaaca
     7501 ttgcaatttt cccggaacgc ccgttgttgc attttttgct acacgcgaga acacccataa
     7561 aaaaatcgca cctgccacta aagagaagaa cagtgtatct aaatgcactg cccaaaagcc
     7621 ttcacctgtc gataaaaaac tcaagtgatg gctaatatat tctgctgtcg ttccagccat
     7681 aacatatcct tttaaattaa aattagtggt gatgtttgct taatacaaac gggatcatat
     7741 tatttaaaaa taatgcgata aaataaccca cgaaaaacaa cacaacatct agagcaggga
     7801 taagtttaaa acagccgatc accaaaataa tagtaaccaa ccatttcatt ccttcaccac
     7861 gatagaaagc ggtcattttt gactgatttt ttgcagattt cttaaagaaa acccaatata
     7921 caaacacaag atgaggcaaa aaactcgcta aagcaccgcc tagaaaggaa aaattaaaat
     7981 tcattttcca taaagacact ccaagtgcaa aaacgcacaa gagaaaaaat tcaaccttta
     8041 atgcttgttt atattgtgat tttgctctat tgattacagc tgacacattt tatccttttt
     8101 gaataagtaa accacacaat caggctaata attagccact gttgaatcaa agaaaatccg
     8161 tgctaaatta tactttacaa atgaattgtt gcaaccgaaa agcgacacaa aaacttgtta
     8221 ttcttcacat ttttgaaaaa aaattttatt tacgttgcat ttttttgagt aaaaccatca
     8281 aaatcagtta acaaaaaaac aacaaataga ggtgtgtgta tttttctctg tcacattatt
     8341 tcaatatttg ataaattccc cttgcttaaa aatgaataaa aattcataat aattgcatat
     8401 attttcactt ccgagtagaa aatgaaataa aaaaagaaga aagaaatagg caaaataact
     8461 aatttttact tgaatgcaaa cgtttgcttg attaaactta gtcgcctact tctaaggcta
     8521 cacagataaa atttgatgat taggagtaaa acaatgttca aaccagcaat tctggttctc
     8581 actgacggtt ctgtcttttc cggcaaatcc attggtgctg acggtcacac tatcggtgaa
     8641 gtggtattta acactgcgat gaccggttat caagaaatcc ttaccgatcc ttcttatact
     8701 aaacaaatag tcaccctgac ttacccccac attggcaata ccggcattaa tttagaagat
     8761 aaagaatccc ccaatgtttg tgcctccggc ttaattattc gtgatcttcc tcttctccat
     8821 agcaacttcc gtgcgtcctc ctcactttca gattatctca ttcaacaaaa cattgtcgct
     8881 attgccgata ttgatacccg ccgtttaacc cgaattttac gcgaaaaagg ggcacaagcc
     8941 ggttgtattt tagtaggcga tgccacagaa gagaatattg ctaacgcttt ggcatttgcc
     9001 aacagtttcg gttctatggc tgggaaagat ttggctcaaa gtgtcacctg caatgaatta
     9061 tataaatgga cagatggtga atggcaatta ggtaaaggtt atgtaccgca acaacaaacc
     9121 gagttccacg tagttgccta tgattacggt gtaaaacaca acattttgcg aatgcttgcc
     9181 gaacgaggct gtcgcttaac cgttgtgccg gcaaaaacct ctgctgaagc tgtgcttgcg
     9241 ttaaatccgg acggtatttt cctttctaac ggcccggggg acccggagcc gtgcgattat
     9301 gccattaccg caatccgaaa attattggaa acgcaaaaac ccattttcgg catttgctta
     9361 gggcatcaac ttttaggttt agcggcaggc ggtaaaacca aaaaaatggt gtttggtcat
     9421 cacggagcta atcacccggt acaagattta gacagccaaa aagtgctcat caccagccaa
     9481 aaccacggtt ttgaagtaga tgaatccagc ttaccatcta atgtgcgagt gactcaccgc
     9541 tcactgtttg acggcacggt gcaggggatt gaactcactg atagaccggc gttttcgttc
     9601 caaggtcacc cggaagccag cccggggccg aatgatgttg cctatttatt tgaccgattt
     9661 gtcagtgaga tgaaaaaagt gaagtaagga cgtacctatg tgtgtccatc aagcggtcga
     9721 aatttgcaaa aaacttacca aaaatgaccg cttgtagcct gaaataaacg agataaaaga
     9781 gagcccaaaa tgccaaaaag aacagacata aacactatcc taattatcgg tgccggtccg
     9841 attgtgatcg gtcaagcgtg tgaatttgac tactccggag cccaagcgtg caaagcgttg
     9901 cgtgaagaag ggtataaagt ggtgttggtg aactccaacc ctgcaaccat tatgaccgac
     9961 ccgaatatgg cagatgtgac ttacattgag ccgattgaat ggaaaacggt tgaaaaaatc
    10021 attgaaaaag aacgccctga tgccatttta ccgactatgg gcgggcagac agcgttgaac
    10081 tgtgccttag atctttcgaa aaacggtgtg ctgaaaaaat ataatgtaga gctgatcgga
    10141 gctaccgaag acgcgattga taaagccgaa gatcgtggtc gttttaaaga agcaatgact
    10201 aaaatcggct tgaatacgcc aaaatcattc gtttgccaca gttttgaaga ggccttagca
    10261 gcacaagagc aggttggctt tccaaccctg attcgcccct ctttcacgat gggaggctcc
    10321 ggcggtggta ttgcttataa tcgagatgaa tttatcgcca tctgcgaacg tggttttgaa
    10381 gcctcgccta ctcacgaatt actgattgaa caatccgtac taggctggaa agagtatgaa
    10441 atggaagttg tgcgtgaccg tgccgataac tgcattatcg tctgctcgat tgaaaacttc
    10501 gacccgatgg gtgtacacac cggcgactcc attaccgttg ctccggcaca aacgctaacc
    10561 gataaagagt atcaaattat gcgtaacgct tcgctggcgg tattgcgtga gatcggcgtg
    10621 gacaccggcg gttcaaatgt gcaatttgcg attaaccctg caaacggcga gatgatcgtc
    10681 attgaaatga accctcgtgt gagccgttct tctgcactcg catctaaagc caccggcttc
    10741 ccgattgcca aagttgcggc gaaattggct gtaggctaca cactcaacga attgcgtaac
    10801 gacatcaccg gagggctgat tccggcttca ttcgagccga ctttagatta tgttgtgacc
    10861 aaaattccac gcttcgcctt tgaaaaattt gccaatgcag acgaccgatt aaccactcaa
    10921 atgaaatcgg taggcgaagt aatggcaatg ggaagaacct tccaagagag tttacaaaaa
    10981 gccttgcgag gcttggaaac cggcatttgc ggctttaact tgctttccga agagcctgaa
    11041 aaaatccgcc gtgaacttgc caaccccgga ccaaaccgta ttttgtatgt tgccgatgcc
    11101 tttggagcag gcttttcatt ggaagaagtt caccactatt ctaaaatcga cccgtggttc
    11161 ttggtgcaaa ttcaagactt agtacttgaa gaattagcgt tagagaaaaa acagtttagc
    11221 gatctagatg ctaacgaaat ccgccgctta aaacgcaaag gcttctcaga caaacgtatc
    11281 gcacagctta ccaaagtcag cgaaaaaatg gtgcgggatt accgccatac ttacgctatt
    11341 ctaccggtgt ataaacgggt agatacctgt gcagccgagt ttgcctcaga tacggcttac
    11401 ctctattcta cttacgagga agagtgtgaa gccaaaccgt ctgatcgcaa aaaagtgatg
    11461 attttaggcg gcggaccaaa ccgtatcggg caggggattg aatttgacta ctgctgcgtt
    11521 cacgcctcgc ttgctctgcg tgaggcaggt tatgaaacca ttatggtgaa ctgcaaccct
    11581 gaaaccgttt ccaccgattt cgacacctcc gaccgcctct atttcgagcc gctaacatta
    11641 gaagatgtac tggaaattgt gcgtgtagaa aacccgtggg gcgtgattgt gcattacggc
    11701 ggtcaaacac cactgaaatt agcgaatgcc ttatctgatg ccggtgtaaa cattatcggg
    11761 acttccgccg acagcattga tgccgccgaa gaccgtgaac gtttccaaca aattctaaac
    11821 actctcggtt taaaacagcc ggcaaatcgc accgcccgta atgcgttgga agcggtggca
    11881 ttggcaaatg aagtaggcta tccgctggtg gttcgcccat cttatgtgct aggtggtcgg
    11941 gcaatgcaaa ttgtgtataa cgatgaagag ctaaaccgct atatgcgtga agcggtatcg
    12001 gtttccaacg acagcccgat tttactcgac cacttcctca ataatgcgat tgaagttgat
    12061 gtggattgca tttgtgacgg cgaaaatgta ctcattggcg gcattatgca acacgttgag
    12121 caagccggta ttcacagtgg cgatagtgcc tgctcactac ctgcctattc gttaagcggt
    12181 catgttttgg acgaaattcg caaacaaacc aacgcaatgg cgtttgctct cggtgtgaaa
    12241 ggcttgatga acgtacaatt tgcagtacaa aatgaggtcg tttatgtgtt ggaagttaac
    12301 cctcgagcca gccgtactgt accgtttgtc agcaaagcta ccggtcgccc actggcaaaa
    12361 atcgctgctc gcgtgatggc tggtgaaacc cttgccgact taaatgcatt agaggaaatt
    12421 atcccaagca aattcttcgt taaagaagcg gtattcccat tcatcaaatt cccgggtgtg
    12481 gataccattc tcgggcctga aatgcgttct accggcgaag tgatgggcat aggtaatacc
    12541 tttgctgaag cgttcttcaa agcacaactg ggtgccggtg aacgaattcc aaaagtcggc
    12601 aaagtgttta tgtcggttat tgaagagcat aaacctgctt taatttacat tgccaaacgt
    12661 ttccaagaac aaggctacgg tttatgtgcc accttcggca ctgcaaactt cctacggcaa
    12721 cacggaattg cagtccaaac ggtaaacaaa gttcgtgaag ggcgaccgca tattgtcgat
    12781 gcgatcaaaa acggcgaaat tgcgttggta atcaacaccg tcagcggcga gcctgaagtg
    12841 attgccgaca gccactctat ccgccgtacc gccttgcaac aacgtgtgcc tatttacacc
    12901 acccttgcag gtgctgatgc tatctcctac ggcgtaaaac atatcaatga gtttgatgtg
    12961 tattcagtgc aggaattaga acaaaaggct aactaaaata aagctaaaat gacaagcggt
    13021 cagattttgc aaatttttta caaattctga ccgcttgtgt ttgtagagga ttatttagta
    13081 aatttatatg ctaaatcatt ccagcgtaat tcatttttga gttgtggtag ctcggtattt
    13141 tggttgatat ggataaactc aataccaaaa tattcagcga acattcgtag catatcggca
    13201 tcaatatcta aactaaatac actatgatga gcaccgccgg ctagaatcca tgcttgagta
    13261 cctacataaa aatttggttg aagcttccaa aaagcatgcc caactggtaa atttggcatt
    13321 ggatttggtg aggcgatagc gtctaaatcc gcaacaacca ttctaaaacg gtctcccata
    13381 tctacaacgg ttgcattcac tgcttttccc gccttactac tgaaaattaa gcgaacagga
    13441 tctgccttac cgccaatacc tagcggtcga atggctaatg ttgatttctc tttggcaata
    13501 gacggacaaa cttcaagcat atgagccccc aataccactt ggttttgttc atctaaatca
    13561 taggtgtagt cttccataaa ggaagaaccg tttggtaagc cataacccat cactttcact
    13621 tcacgcacaa gagctgcggt tttccaacct ccttcaccac caaatccgta gccttgttcc
    13681 attaaacgct gaacagccaa gcccggtaat tgtttaatcc catttagatt ttggaaatta
    13741 tcagtaaaag ctttaaatcc accattatct aagaatgttt ttaagccgat ttcaatacga
    13801 gcagaatatg cgagagattc tcttgctgaa ccattttctt gcaagctatc ctcaacatta
    13861 tacaagcggt cagattttgc aaaaaaatga ccgcttgttg ccatttctaa agtgtgatct
    13921 acctctcaaa tttacaaaat tttttataac atattgattt aaaatgtttt ttatattttt
    13981 cctttaattg actttaattt gtcttaagag taacttataa aacgtgattt tactatttga
    14041 aatattgagg tattcaagat gactattcga gtttcctatg aagaattaaa agctcaattt
    14101 aaacgtgttc tgttggctcg caatgtgcgt gaagagattg ccgaagagtg tgccactgtg
    14161 tttgccgaca ccactcaagc gggtgcttat tcacacgggg taaaccgttt cccacgcttt
    14221 attcagcagt tagagaacgg tgatattgtg ccggaagccg tgccgactaa agtgctttca
    14281 ctgggggcga ttgagcagtg ggacgctcac caagccatcg gtaacttaac cgcaaaaaaa
    14341 atgatggaca gagcaatgga gcttgcatct gaaaacggca tcggcgtagt ggcgttacgt
    14401 aatgcaaacc actggatgcg tggcggttct tacggatggc aggcggcaga gaaaggctat
    14461 atcgggatct gctggacgaa cgcccttgcg gtaatgccgc cttggggggc gaaagagtgc
    14521 cgtatcggga ctaacccgtt aatcattgcg gtgccgacta acccaatcac gatggtggat
    14581 atgtcttgct caatgtactc atacggaatg ttggaagtgc atcgccttgc tggtcgtcaa
    14641 acctttgtcg atgctggttt tgatgatgac ggcaacccaa cccgtgatcc ggcaacggtc
    14701 gagaaaaacc tccgtctaat gccgatgggc ttctggaaag gttcgggctt atcgattgtg
    14761 ttagatatga tcgccacctt gctctctaac ggtgaatcca ctgcggcagt caccgaagat
    14821 aaagacgatg aatattgcgt gtcgcaagtt tatatcgcta ttgaagtgga tcgcttaatt
    14881 gacggcaaaa ccaaagacga aaaactcaac cgtattatgg aatatgtgaa aaccgcagaa
    14941 cgtgccgacc ctgatgtggc agtacgttta ccgggccacg agttcaccca aattctagcc
    15001 gataacaaag ccaacggcat tccggtggat gacaccgttt gggcgaaatt acaggcgttg
    15061 taattgcaaa ttgaccggta gggtgggcgt aagcccacgc attagacaca atcataagat
    15121 gacgtgggct tacgcccacc ctacaagcgg tcatttttcc gcagaatttt acaaaacgga
    15181 ggtatgaatg ttttttggtc atatttcaca agttaaagcg aatcgatacc cgccggcgat
    15241 ccaaattgcg ttgaactatc tgaaaaatac cgattttgat gcgatggaag caggggttta
    15301 cgaactcaaa ggcagacaaa tttatgtgca ggtgttggat ttgaacacca aatcgaaaca
    15361 cgaatttcag ccggaagtgc atcgcaatta cctcgatgtg cagtatctac accgaggcaa
    15421 agagataatg gctgcggcgg tggataccgg caccaatccg attgcgatgg aatacaaccc
    15481 tgagcgggat attcaatatt atcaatccgt tgccaacgaa aatgaatttc gctgcgttga
    15541 aggcaatttt tgacggcacg gaaaccattc gcaaagtggt ggtaaaaatt gcgatgagcg
    15601 aaattgagga gcaacgatga aagccttagc tcaattagtc ggaaaactgt tagaaatctt
    15661 ggtggtggtg attttatccg caatgtcgat tttggttttc gtcaatgtgg tactacgtta
    15721 cggttttaac agcagcatta gcgtgaccga agaggtgtct cgctatatgt ttgtttggtt
    15781 ggcgttttta ggggcggtgt tggcatttag cgaaaatcaa cacgttaaag tcacaatgct
    15841 gaccgataaa ttatcgccaa cggctcgtaa tatcttaagc gtagtcacag atttagcgat
    15901 gttgttctgt tgctacttaa ttgtggacgg tagctggatt caatttaacc tcaacctgaa
    15961 taactttgcc ccgatttcag gcttaccgca aggcatcact ttccttgcca gcacagtggc
    16021 aggggtatta atcggtttat taattattgc ccgcattgtg gcaacggttg gcgtgattgc
    16081 aaaaggagaa aaatagatga ctgtggtaat ttttctttcc gtcttgcttg gctcgatttt
    16141 attgggcatt ccggtagctt tcgccctgtt ggtctgcggt gtggcgttaa tgttgcattt
    16201 agatctgttc gatgcccaaa ttttggctca acaaattgtg agcggtgcag acagtttctc
    16261 gctaatggca attccgttct tcattcttgc cggtgaaatt atgaacgagg gcggtctctc
    16321 caaacggatt atcgacctgc cgatgaaatt agtcggtcat aaacggggcg gtttaggttt
    16381 tgtagcaatt ttagcggcga tgattatggc aagcctttcc ggttcggcgg tggcggatac
    16441 cgcagcggta gtcgcaatgc tactgccgat gatgaaaacc accggttatc cgattgaccg
    16501 ctctgccggt ttaatcggta cggcagggat tatcgcccca atcattccgc caagcattcc
    16561 gtttatcgta tttggtgtgg ctagtggcgt gtccattacc aaactgttct tagccggtat
    16621 tttcccgggc attatgatgg ggatctgctt ggctgccctt tggtggtggc aggcaaaacg
    16681 tttggattta atgaccttct ccaaagcgac caaagaagaa ctttgcattt catttaaaaa
    16741 cagtatttgg gcgttattgt tgcctgtcat tattatcggt ggtttccgct cgggaatgtt
    16801 caccccaacc gaagcgggtg cggtcgcaac tttctatgcc ttgattgttt cactgtttgt
    16861 ttaccgtgaa atgaagttca aagatttata caaggtagtg ttggcggcag cgaaaaccac
    16921 ggcagtagtg atgttcttag tggcagcggc aaatgtgacc ggctggctga ttaccgtagc
    16981 ggaattaccg atgatgctca ccgagctgtt agagccgtta attgaaagcc cgaccacact
    17041 cttattggtg attatgttag cggtgtttat tatcggaatg gtgatggact taaccccaac
    17101 cgtgctgatt ttaacgccgg tattaatgcc gttggtggaa gaggcaggca ttgacccggt
    17161 ttacttcggt gtgctgttta ttcttaacac ctccatcggc ttgattacac caccggtcgg
    17221 caacgtgcta aacgtgatta ccggcgtgtc gaaactgccg ttcgaccaag cggctaaggg
    17281 cgtaatgcct tacctcgtaa tgatgatttg tttactactg ttgttcgtgt tcttcccgtc
    17341 actggtgtta gtgccgttaa gctggatgca gtaatggttt gaaccgaaac aagcggtcga
    17401 attgacgcaa aaatttgcaa atttttttgg caaaacagac cgcttgcaac tcaattttta
    17461 atcacaggag aaccctatga aattatttaa tttaaaaacc ttatttgcct tagtggcagg
    17521 cgttgcggta atgagcggct ctgcaatggc agaaacctca ctgcgttttg gttatgaagc
    17581 cccacgttcc gatacccaac acatcgccgc caaaaaattc gatgaattat tggcagcaaa
    17641 aaccaaaggt gaaattaaat taaaactgtt tccggacagc accttaggta atgctcaaac
    17701 gatgatcagc ggcgtgcgtg gcggtactat cgacattgaa atgtccggct cgccaaactt
    17761 taccggctta gagccaaaac taaatgtgat tgatattccg tttattttca aagatcgtga
    17821 acacgtttac aaagtattag acggcgaagt tggtcaaggc ttattaaaag atttagaagc
    17881 ccaaggctta aaaggcttag ccttctggga cgttggcttc cgtgctttct ccaactcaaa
    17941 acaccctgtg accaagccgg aagacatcaa aggcttaaaa gtccgcacca accaaaaccc
    18001 gatgtacatt caagccttca ccttactagg cggcaacccg gtgccaatgc cactttctga
    18061 gctttacacc gcactcgaaa cccgtgccgt tgatgcccaa gaacacccaa tcggcatttt
    18121 ctggtcggca aaactgtttg aagtacaaaa acatttaagt ttaaccaacc acggctacac
    18181 cccgttaatc gtggtgatga acaaagcgaa gtttgacggc ttagctcctg aattacaaac
    18241 cgcattagtt gaagccgcaa aagaagccgg tcaattccaa cgtgatctca acgtgaaaaa
    18301 cgaaaaagag atcatcgaaa aattacgcaa acaaggcatc gaagtgatcg aacaagtgga
    18361 taacgccccg ttcaaagcag cgattgaagc ggaagtccgc aaagctttcg tggaaaaaca
    18421 cggcgatgaa ttattgaaaa aagtggatgc gttagcacag taattgactt tattttagtc
    18481 taaagctccc tccgtttggg gggagttgtt gtatagactc tactatagga gagactatga
    18541 aactgtttaa tttaaaaact ttagccgctt tcgttgccgg ttttgcactg ttttcaaccg
    18601 cacaagcaga aacctcattc cgctttgcgt atgaagctcc tcgttctgat actcaacata
    18661 ttgcagcgaa aaaatttaat gatttgctgc aagaaaaatc ccaaaaaggg ctgaaattaa
    18721 gcctcttccc tgatagcacg ctcggcaacg cacaaacggc gattagcggt gtgcgtggcg
    18781 gtactattga tattgcaatg tccagctcct ctaactttac cgggttagaa ccaaaactga
    18841 atgtgattga tattccgttt attttcaaag acagagacca cgcctataaa gccttagatg
    18901 gagagattgg tcaaggttta ttaaccgcat tagaggctca cggtttgaaa gggttggcgt
    18961 tttgggaagt tggtttccga gcgttttcca actccaagca cccgatcacc aaaccggagg
    19021 atattaaagg cttaaaaatc cgtactaacc aaaacccgat gtatattcaa gccttctcta
    19081 ttttaggtgc aaatccggtg ccaatgccgc tttccaagct ttacactgca ctggaaacca
    19141 aagcggttga tgcccaagaa cacccaatcg gcattttctg gtcggcaaaa ctctatgaag
    19201 tacaaaaata tttcagcttt actaaccacg gttacacccc gttaattgtg gcgattaaca
    19261 aagcgaaatt tgatgcactg ccagccgagc aacaaaccgc attagttgaa gcggcaaaag
    19321 aagccggaaa ataccaacgc caacttaacc tagaaaatga gcagaaaatt atcgactcgc
    19381 tcaaaaaagc aggtattgaa tttgtggata acttagatac cacaccgttc aaagatgccg
    19441 tatcggctga aacccgcaag gcatttatcg agaaaaacgg tgatggctta gttaaagcca
    19501 ttgatgcatt ggcgaagtaa aaatagagct acaaagtgct cggttaaact aacctcacac
    19561 gaatcgtgtg aggtacaagc ggtcaaaatc cgcaaaattt ttacacatct ttcctcaaag
    19621 gaggaacaaa tggcacagcc cattttaagt atgcagcaca tcatcaaacg ctttggtagc
    19681 catacggcgg tgaatgatgt cagccttgat atccactcag gcgagatcgt tgccttactc
    19741 ggtgaaaacg gtgcaggtaa atcgacccta atcaaaatcc ttgccggtat ttatgaccgt
    19801 gacgagggtg atattctttt ccataaccaa aaaatccaat ctgcccacgc tattgagaaa
    19861 ggcaacaaaa agcccatcgc ttttatccac caagatttag gcctaataga atggatgacg
    19921 attgccgaaa atatggcatt tgtaatgggg ttccctcgca aatttggctt gattgactgg
    19981 gcgaaagtgc gagagcagtc gcaaaaagcc cttgattttg taggcattaa actctctgcc
    20041 gacactcgag tgtttgattt aagccgtacc gaaaaagcct tactcgccat tgcccgtgcg
    20101 attgccgtca atgcagaaat cttggtttta gacgaaccta ctgcttccct acctgcctct
    20161 gatgtagagc atcttttcac tgtgttaaac cgcttacgtt cccaaggtgt gggaatgatt
    20221 tatgtgaccc accgtttaga tgaagtgatc gccatttccg accgcatttt ggtgatgcgg
    20281 gacggtttcc cggttgcaga agggcaaacc aagctctatg acgtcaaagg cttggtcaaa
    20341 gcgattgtag gcgaagagag ccgtggcaga cagcgggtgg atttaccaac cgatactcct
    20401 gaaattttaa gcctgcaaaa tgtcgtggtt ggcgacaccg gcccggtgaa tttccgtctg
    20461 cacaaaggtg agatgattgc ccttgccggc ttgcgtggag cagggcagga agaaatcggc
    20521 cgcttattat ttggggagcg aaccttagac aaaggcgaaa ttcagttaga caagcggtca
    20581 tattctgcta aagatccgca agatgcgata gccaaaggtg tggcattggt tgcgggagac
    20641 cgcacccgtg aaagcgtgtt tatgtcaatg actaccagtg agaacctgtt tatcaacccg
    20701 gtactaagcg gtcattcacc attaaaacgc tactcccgcc gtgaagagtg gggtgagagc
    20761 tggtacaaat tccaactatt cgatattcgt ccgaaaaatt tgtttattga tgccagtgcg
    20821 ttatccggtg gtaatcagca gaaaatcgtg ttggcacgtt ggatgcacct caatacgcct
    20881 gttctgattt tagaagaccc gactgccggc gtggatgtag gagcaagggc agagatttac
    20941 gacttgctca acaaagccct tgcagaaggg gtcgcaatta ttgtgatttc caccgacttt
    21001 gaagagatcg ctcatttgtg taaccgagca ttagtcttca accgagggga aattgccggt
    21061 gaactactga acgaagaggt gactttcgcc aatttgctgg cgttggcatc ggatagtcag
    21121 tcgaaaaaac aataacttac tctcgcccgc ttgcgggaga gagacagcta aaaatagcgt
    21181 caggctattt ttagcagaga gagggtaaac aagcggtcat ttttcttaaa aaatattgcg
    21241 aaccctctcc ctccgaaagc ctaacggctt tctcctccct ctcccgcaag cgggcgaggg
    21301 gaaaatgcag aattttaacg gagtaattta tggctcaaac aaacatcaaa tcaaccgcac
    21361 tggaacaacc ggtatctatc gcccgtgacg gttttatggc atggttttca caaatgtcca
    21421 ctcgttatgg cttactgtgg ttatgtgtgt tattggtgat tattttctca cttaccaccg
    21481 aatctttcgc ctcaatgctg acattaaatg cgattttaga aagtaaatcg aaaattgccc
    21541 tacttgcttt ggcagccaca actacaatga ttgtcggcaa aatcgacctg aacgtgggtt
    21601 tcggtattgt gttgtggcac attcttgtga ttactctgca agtccaatac ggcttctcgt
    21661 ggtatatggc gatcttaatc gtgttagtga ttgccgctct ttacggcttg ctgaatggga
    21721 ttttagttgc tcttgctgat atcgatagct ttgtggcaac acttggctca ggcacagtgc
    21781 tttatgccgt agcactctgg cactcgggcg gtcgccaaat tgtcggggat ttacccgatg
    21841 aatttatcgc actcaacagc acagaaattt tcggtatccc gatttctgct ttctatgtgc
    21901 tggcagtggc tatcgtaatg tggttggtga cagaacatac cccgaccggt cgttgtatgt
    21961 atgcggttgg tggcaaccca acggcagctc gcctaaatgg tatcaatatt aaaaaataca
    22021 ccattgtgcc gtttattgtc tctagtgtaa tcactgcttt cacaggcgta ttgatctctg
    22081 ctcaacaagg cgttggtcag gcaagtgtcg gtatggacta cttactgccc gcattggttg
    22141 gggcattctt agggagtacc actattcgcc cagggcgtat taacgtatgg ggaacagtgg
    22201 tggggattgc cattcttgcc atcggtattt caggtattca acaattcggt ggagcgttct
    22261 gggttgagcc actctttaac ggtgcaacac tgttactttc catcactatt gcaggctatg
    22321 cccaacgcaa acgcttgtta aatcaaaaag ctgtacagaa aaaatcgacc aactaagagg
    22381 atttgattat gaaaaaagca tttcgtacaa ccttaactgc aatcgcaacc ttaactgcta
    22441 ttgctttcgg aaataatgcg tttgccaatg acgacccgtt cgtacaagaa gcaaaacagc
    22501 ttgtcgcagc agctacggct aagcaagaaa aatgggacgg accgacaacc ggccctcaat
    22561 tacaaaaaga gaaaactgtg atttttattg cctctgatat gaaaaacggt ggtgtacttg
    22621 gtgtgattga cggaatgaaa gaagctgttg gcgtaacggg ctggaagtta gatgtattag
    22681 acggtgcagg tacggtaaac aaccaactcg ccgcacttaa ccaagcgatt gcccgcaaac
    22741 cggatgcgat tgtgattggt ggctggaacc cgaatgtggc gaaaatccca ctacaaaaag
    22801 cgactaaaaa cggcattaaa cttgcagctt ggcacgcaac accggagccg ggtgcgattg
    22861 ataaatacgg cattttctac aacgtgacct ctgactcaga cgaaattgca cgcttatcgg
    22921 caatgcttgc ggtggcagaa tctaacggta aggcaaaagc gattatttta accgactcgc
    22981 tatatgaaat tgcgttacgc aaagcgaacg tcatgaaaga agttatcgaa aaatgtaaag
    23041 agtgtaaggt gttagagttt atcgacacgc cattggcgga tacctcaagc cgtatgccta
    23101 acctcacttt cagcttactg caaaaatatg gcgacgattt agagtatgcg ttggcaatta
    23161 acgatctcta ctttgacttt atggctccgt ctttacgcac cgctggtaaa gataaaccgt
    23221 ttagcatttc cgcaggtgat ggctcagtaa cggcttatca acgtattcgc aatggtgata
    23281 aacagtttgc aaccgtccct gagccactta acttacacgg ctggcagtta gtcgatgagc
    23341 taaaccgtgc tttcgctaac gaaaaaccgt ctggttatat cacaccggct cacctagtga
    23401 ctaaagaaaa tgtggcgttt gacggtggtg aaaacaacct gtatgcccca caaaacggtt
    23461 acaaaggcgc ttacaaagcg atttggggcg tgaagtaatg acgtaggggc aaataaatat
    23521 ttgcctcgaa caagcggttg ttttttgcaa agattttgcg aaatttaacc gcttgtcata
    23581 aaaaatagag agggtaatac aaatgagcaa taaatttatc cccaaaatct ccaaccctcg
    23641 ttttaatgag ctggttggga atacgtttga acttgaagag ctttttgata aggcaatctg
    23701 ggcagaaggg ccggcgtgga gcaagccaca acaagccctc tattttagtg atgtaaaagg
    23761 ttgcacaatg taccgctgga cagagcaaga tggtacacag gttttccgcc agccgtctta
    23821 tttttctaac ggcaatgcgt ttgatgcaaa cgacaacttg attacctgtg aacacggcaa
    23881 tcgaggtatc agtttaacca cgccaagcgg tgaatatcgt tttttggtcg gtcaattaga
    23941 cggaaaacga ctgaactcac ccaatgatgt ggtggtaaaa tcagacggca tcatttggtt
    24001 cactgatcca ccttacggta ttttgtcgga taacgaaggc aaacagtcgc caagcgaaat
    24061 tatcggttgt tatatttact gctatgatcc gaaaaccgac aagctgaata ttgcaacttt
    24121 caacacgatg cgaccaaacg gcttggcctt ctcgtcagac gaaaaacaac tctttgtggc
    24181 agatatgtcg agcgtggaat ttgacgaaga tggcttacac cacttagtcg tatttgatgt
    24241 ggacggtaat aaactaaaaa atcgccgaga tgtggcggaa attagtcccg gcattccgga
    24301 cggcttccga attaaacaaa acggcgtaat tttctgctct tgtgaagagg gaattattgc
    24361 tattttacct gacggcacgg agctgggacg atttgtgctg ggtaagctaa cctcaaattg
    24421 tagctttggc gatgatgaac aaacactgtt tattacttgt tcgaatagcg tttatcgttt
    24481 aacaattaaa tagcagaatg cattaagtgc gtctgttgta gcattacaag cggtttcttt
    24541 ttcaaaattt tttacaaaca aataatggat aacaaaatga actacacact cggcattgat
    24601 tgcggtggga cttttatcaa agccgctctt tttgatacac aaggtaatat tcaagccctt
    24661 catcgtgaaa acgtttcggt aatcagtgaa caggcaggtt atgcagagcg tgatatgtca
    24721 caactctggg ctatttgtgc ggaagtagtg cgttcaacca ttgaaaaaag tggggtaaac
    24781 ccagcggata ttaaagcagt agggatttcc gctcaaggca aaggggcgtt tttactggat
    24841 aagcagaatc gaccgttggg gcgtgcgatt ttatcttccg accaacgttc ccttgagatt
    24901 gttaaacaat ggcaggctga aggcattccg caacaacttt acccgattac ccgccaaact
    24961 ctttggacag gacaccctgt gtcgattttg aagtgggtgc agcaaaatga accggagcgt
    25021 tatgcacaaa tcggggcggt gttgatgtcg cacgactatt tgcgtttttg cttaaccggt
    25081 gagttgcatt gcgaagagac caacatttcc gaaagcaatc tttacaatat ggaaaaaggc
    25141 gaatacgacc aacagttagc cgatttgttg ggaatgccgg atgtgttgga gaaattacca
    25201 ccagtgattg aaccgaataa aatttcggga tatgtgactg aaaatgccgc caaattaacc
    25261 ggtttagcgg tgggtacgcc gatagtcggt ggcttgtttg atgtggtttc taccgcacgt
    25321 tgtgccaatt tagatgacga aaccaaactg aatgcagtgc tgggaacgtg gtcggtggtg
    25381 agcggcatta ccgatcatat tgatgcaagc caatcattac cttttgttta tgggcgttat
    25441 gccgaggcag ggaaatttat cgtccacgaa gcaagcccga cttctgccgg taatttagag
    25501 tggtttgtga atcagtggaa actcgattat gtgaaaatca accaagctgt tgcccaatta
    25561 ccgccggcgg caagctcggt gctgtttgtg ccgtttctgt atggctcaaa tgcaggctta
    25621 ggaatgcaag ccggtttcta tggtatgcaa gcccaccata cccaagccca tctcttgcag
    25681 gcaatttacg aaggagtgtt gtttagcttg atgagccatt taaaccgtat gtttatccgc
    25741 tttccaaagg ctgacgtgct gcgagttacc ggcggaccgg tgaaatctaa agtttggatg
    25801 caaatgttgg ccgatttaac cggaatgcgg cttgaaatac cacaaatgga agaaaccggc
    25861 tgcttgggtg cggcattaat ggcaatgcaa ggggttgggc tggatataag ccaagttcaa
    25921 gccctaaata atgaaatgca ggtgtttgag ccaaatccgg aaaattatgc ggcttatcag
    25981 acgaaatatc agcgttacca aaaattaact gaagcattaa atacaatgat ttaacctgaa
    26041 tttatgcttt tacaagcggt aatatttggt tacttttttg caaaaattac tgcttttttg
    26101 tttatttaat ttatgaattt aattaaataa tctttaaatt aaagg
//
LOCUS       DANLTI010000018        26001 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.018, whole genome shotgun sequence.
ACCESSION   DANLTI010000018 DANLTI010000000
VERSION     DANLTI010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26001
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.018"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..265
                     /gene="ftsB"
                     /locus_tag="PXB09_000619"
     CDS             <1..265
                     /gene="ftsB"
                     /locus_tag="PXB09_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDL5232766.1"
                     /translation="TFFALLLGFFQYSFWFGKNGWSDYQEVQEEIALLKVENTKLTSR
                     NKLIEAEIYDLKNGVDALEERARLEREMVKENEMFYRIVPKNK"
     gene            283..966
                     /gene="ispD"
                     /locus_tag="PXB09_000620"
     CDS             283..966
                     /gene="ispD"
                     /locus_tag="PXB09_000620"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDL5232767.1"
                     /translation="MKRKIIAVIPASGVGSRMQAEKPKQYLQLKGKTILEHTVSIFLE
                     HPHVEKVIVAVARKDPFYSTLELLKSPKIQLVFGGETRADSVLNALQEINTENAWALV
                     HDAARPCLKRSDLDKLLQINDPQGGILAIPAVDTMKRANGTKIAHTEDRSTLWHALTP
                     QFFPAQALKQALSSAFANKLQVTDEASAMELAGYQPQLVSGRSDNIKITRPEDLALAE
                     FYLTHNLEN"
     gene            968..1447
                     /gene="ispF"
                     /locus_tag="PXB09_000621"
     CDS             968..1447
                     /gene="ispF"
                     /locus_tag="PXB09_000621"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDL5232768.1"
                     /translation="MIRIGHGFDVHAFGEDRPLMIAGVEVPYHTGFIAHSDGDVALHA
                     LTDALLGAAALGDIGKLFPDTDMQYKNADSRGLLIEAYRQVQEQGYQVGNVDVTIIAQ
                     APKMRPHIDKMRQVIADDLQCDISQVNVKATTTEKLGFTGRGEGIACEAVALLLKRA"
     gene            complement(1562..2419)
                     /locus_tag="PXB09_000622"
     CDS             complement(1562..2419)
                     /locus_tag="PXB09_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5232769.1"
                     /translation="MMKSLCKFLSIFNRLLLVCLALFSLNATAVTYPEPPNPFYYITD
                     YTKNTLSQQEWRTLEDALIANCAKTSSQIAVVIIPSTEGEAVSTYAHTLFNKWGIGRS
                     KNNENNGILLLIAKNDRKLFIATGRGLEGALPDAIASSIIRNDITPFFKQEQYAAGIA
                     HGLSAIMAAINGEYAPYASYGEEMQEFDDIDGLLFFLFAGIVIFLIFRPRGNSTYISP
                     SSMDQLGQILRESQRRGGGFGGGLGGGFDRGSGGFGGGFGGGFGGSRGSGDSFGGGSS
                     GGGGAGGSW"
     gene            complement(2416..2874)
                     /locus_tag="PXB09_000623"
     CDS             complement(2416..2874)
                     /locus_tag="PXB09_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5232770.1"
                     /translation="MGLFSFLSNKLPIDTQRIEQAIADLEQKTSAELRVVVERKAKIG
                     KTDNAAMLRASELFDELKMRETAEHNGVLIYLSFKPHYAAIIGDEGIHQKVDNDFWQK
                     IYATMCLDCQQGDYTQAICDAIKMVEAPLAHHFPYQADDKNELSNEVVVK"
     gene            complement(2956..3540)
                     /locus_tag="PXB09_000624"
     CDS             complement(2956..3540)
                     /locus_tag="PXB09_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDL5232771.1"
                     /translation="MKKIFWILLIAMLAVGGYSLTKYNDLMRAEEDINSVWGNVESAY
                     QRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDPSNATEEQMAKFQEAQQ
                     GVNSALSRLLVSVEKYPELKAHEAFLNLQAQLEGTENRINVERNNFNEKVKEYNKQVR
                     EFPTKLAAMIMGFKAKPQFKSEAGSDKAPTVNFN"
     gene            3718..4581
                     /gene="rarD"
                     /locus_tag="PXB09_000625"
     CDS             3718..4581
                     /gene="rarD"
                     /locus_tag="PXB09_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5232772.1"
                     /translation="MLKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPF
                     ILLAIILFKQQSAFADLLQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVS
                     FGYLLLPIVAVALGKMVFKEHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGY
                     PLYITLRRYFQINTLATFFVELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLV
                     SGSAFILYILSSNLLPINVLGLLGYVEPLVMLLISFAIGEKLDANSYILMVCLLVSIG
                     LLSWDSFRSKV"
     gene            complement(4734..5252)
                     /locus_tag="PXB09_000626"
     CDS             complement(4734..5252)
                     /locus_tag="PXB09_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lhr family helicase"
                     /protein_id="HDL5232773.1"
                     /translation="MILLRGDTMQFIEFTDPDSGISYQYSEFTIANVAFIINFCSDAD
                     VISTLSALGKDITNYINTYSCCTIKFMAKEHLENSGSNIDIYAPAANHQFKRKEIIAL
                     QETLERLLFEHYVRFTPESYLFIAERDSLNRMYQRMCVPRCDFMQSFQVVYPLGVNQD
                     CFILITPKGNLK"
     gene            complement(5419..7083)
                     /locus_tag="PXB09_000627"
     CDS             complement(5419..7083)
                     /locus_tag="PXB09_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5232774.1"
                     /translation="MNISFVFPQTLGNARRFLVNEMLSAAAKQQGHNVVAANQADFVV
                     LFDNAIPQEAAGKQGAILDLEQAFAQPEASLKQAVENAQTFANATATTAVSAVSSGVK
                     NIVAVTACPTGVAHTFMSAEAIENYAKAQGWNIKVETRGQVGAGNPISAEEVAAADLV
                     FVAADIDVDLEKFKGKPMYRTSTGLALKKTTQEFEKAFAQAKIYEGGVAKADNAEAPT
                     SEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGG
                     AAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFL
                     NGAIQLPASLTSLKPILILPLLGSAIVGLLMIYVINPPVKALMDALVEWLNTMGQTNA
                     IILGIILGAMMCTDMGGPVNKAAYTFGVGLIASQQYMPMAAVMAAGMVPPIGMAIATL
                     IARSKFNTNQRDAGKASFVLGLCFISEGALPFVAADPVRVIASSILGGATAGAISMAL
                     GITLQAPHGGLFVIPFVSQPLMYLAAIAIGSLVTGVVYAAIKQKAE"
     gene            complement(7109..8053)
                     /gene="fruK"
                     /locus_tag="PXB09_000628"
     CDS             complement(7109..8053)
                     /gene="fruK"
                     /locus_tag="PXB09_000628"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDL5232775.1"
                     /translation="MRIATVTLNPAFDLVGKLQRIEIGEVNTVETLGLYPAGKGINVA
                     KVLADLGTKLSVTGFLGEENQGDFVNAFKHNDLADEFYRINGKTRINVKITETEADVT
                     DLNFLGFEISESDWEKFVTLSHQWESKFDLVAVCGSLPRGVTPEKFASWLESLHRQGL
                     KVVLDTSNAALTAGLTAHPWLVKPNRRELEVLVGHSLNSIEEIISAAKQLRSRGIENV
                     IISMGEQGSLWLNHEGVLQARPPRCENVVSTVGAGDSMVASLIYGLSQGWSKEQTLRF
                     ASATSALAVVQSNVGIADRAALDDIIKQTDITVISENH"
     gene            complement(8067..9545)
                     /gene="fruB"
                     /locus_tag="PXB09_000629"
     CDS             complement(8067..9545)
                     /gene="fruB"
                     /locus_tag="PXB09_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDL5232776.1"
                     /translation="MLNLSAKNIRLNGSASNKEEVIRFVAAELVAKGNVAAGYEVGML
                     NRETQTSTFLGNGIAIPHGTLDTRDLVKETGVQIIQLPQGVEWGEGNTAYVVIGIAAK
                     SDEHLTLLRQLTTVLSDEEAAATLAKTQNLDEFIAVLSGKKNLPALSQELISLNIESS
                     SPITLSAINAAKLQEQGYVSQAFISDVVANKALHLGNNLFVVDSAKGNQANGIAIARN
                     TQGQTLLTVAETDNALQPLLTQLLKPEVRSQFAHFSAEQMLGLLKGESVASTPVTNVE
                     ASGNQVVGTFTIRNDNGLHARPAAVLVQTVKPFSSKISVENLDRNTAPASAKSAMKVV
                     ALGASQGHRLRFVAEGEDAQQAIEALQQAIINGLGESVSFVPAVADTIESIAVSAIPA
                     EETATAVDANTKEATFVIKNEHGLHARPSAVLVNEVKKFNAKIEVQNVDKNSPLVSAK
                     SLMKIVALGVTKGTTLRFVASGDDAEVALAAIGAAIEAGLGE"
     gene            9833..12055
                     /gene="glgB"
                     /locus_tag="PXB09_000630"
     CDS             9833..12055
                     /gene="glgB"
                     /locus_tag="PXB09_000630"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HDL5232777.1"
                     /translation="MQDYTYSEKDAFFVERLSSGSCNDPFSYLGIHPSNNGVIIRVFL
                     PSAIACQVIDLNGKPVSSMLKIDDRGFFIAELIGKKTDFSYRLLVEYPDSTVDIEDPY
                     RFKTHIQELDNWLFAEGKQLRPYEKLGAHLVTQNEVGGVHFSVWAPNAQRVSVVGDFN
                     HWNGLVHSMRFHPDSGIWDIFLPNVKKGECYKFEVLDRNGVLRLKSDPYAFASQFRPE
                     TASIVSGLPSIVPAEKTCRNANAPDKPISIYEVHLGSWRRNIENNYWLSYEELADELI
                     PYVKDMGFTHIELLPISEFPFDGSWGYQTTGIYSPTSRFGTPEGLSYFIQKAHDKGIG
                     VILDWVVGHFPVDEHGLVYFDGTHLYEHSDPKEGYHKDWNTLIFSYGRNEVSNYLSGN
                     ALYWIERFGIDALRVDAVASMIYRDYSRSDGEWIPNKYGGRENLEAIDFLRHTNNILR
                     DESQGGASIAEESTSFAGVSHSTERGGLGFNYKWNMGWMNDTLRYMQKDPIYRRYHHN
                     LMTFGMTYQYSEQFVLPLSHDEVVHGKGSLLNKMPGDCWQKFANLRAYYGYMWGYPGK
                     KLLFMGNEFAQGKEWNFAESLDWYLLGEEGGEWHKGVLGWVKALNHLYTQTPALFEQD
                     YNPEGFEWLVVDDHDNSVFAFERKAKNGDSVIVVSNFTPIVRENYRFGVNELAEYQEI
                     LNSDLACYCGSNVSNANRFASELIASHGKAYSLSITLPPLSTIFLKRAADKKTKQNKT
                     "
     gene            12079..14091
                     /gene="glgX"
                     /locus_tag="PXB09_000631"
     CDS             12079..14091
                     /gene="glgX"
                     /locus_tag="PXB09_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDL5232778.1"
                     /translation="MHYFRGKPFPLGNKLDRQAGEFGTNFAIVSQNATAIELCLFDEN
                     HHETRIPMFSSGDTWHIFVAGVQAGTKYGYRVKGIQDEQAGLLFNPQKLLTDPYAKAI
                     EGKPDLSSAEAAAWYKWNDERDNASLAPKSIVIDEHFDWENDSQLFTPWAETIIYEMQ
                     VKGFSQRNFQIPSDIRGTFAGLAHPVSIDYLKTLGITAVELLPVTYHIDETHLQKQGL
                     VNYWGYNVLGNFAIDPNLAADKQNPLKEFKQLVKTLHQAHIEVIMDIVFNHTAESDKN
                     GPMLSFRGIDNTAYWLDKQGEYENWTGCGNTLNLSNPYILCWAIDCLIYWVEECHIDG
                     FRFDLASILGRTPSFSEKADFFTALKSHSKLTHIKLIAEPWDIGVEGYQLGQFPEPFY
                     QWNDCYRDDIRRFWLQNQGDWGLLARRLAGSDDVFTKYSVSKSINFITAHDGFTLQDL
                     TSYQQKHNWANGEQNRDGHNSNYSNNHGVEGQTADELVKKQREITACSLLATLFLSAG
                     VPMLLAGDEIGHSQQGNNNSYCQDNEITWLDWENMNHTRLDYVRSLIRLRKKIALLSK
                     QNNWWQEDSVQWLNPSAQLMNIDDWHNQHNGLVVLLQEEWLLLFNANRQPQPFLLPQG
                     NWKVVLEQAQGILMTDTQAVTLNNMGVCVLQKSDVMFANKLETQYA"
     gene            14084..15397
                     /gene="glgC"
                     /locus_tag="PXB09_000632"
     CDS             14084..15397
                     /gene="glgC"
                     /locus_tag="PXB09_000632"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDL5232779.1"
                     /translation="MLNQESTALVARQDLTNDTLVLILAGGRGSRLYELTDKRAKPAV
                     YFGGSRRIIDFALSNCINSNLLKIGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLP
                     ARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLKDHVDQG
                     AKCTVGCIEVPRSQATEFGVMAVNEKLKVKEFVEKPADPPAMPGKPDSSLASMGIYVF
                     NADYLYEMLEKEASTPGTSHDFGKDIIPKAVEQGVLYAHPFERSCKGRNASGAIYWRD
                     VGTIDSYWAAHMDLVSEDPELDLYDESWPIHGRPQQTAPARFFYNRARARTLDNSLIA
                     GGCVITDAEISNSVLFNRVHVEAESVIEHTVILPQVTIGKNCVIKRAVIDRHCVIPDG
                     LEIGVNAEEDAKRFRVSKNGIVLVTQSMLDKLAGKEANSDIKYTI"
     gene            15520..16956
                     /gene="glgA"
                     /locus_tag="PXB09_000633"
     CDS             15520..16956
                     /gene="glgA"
                     /locus_tag="PXB09_000633"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDL5232780.1"
                     /translation="MKVLHICSEMYPLIKTGGLADVMGALPFAQQQAGNDVRVLIPYY
                     PKVAQTLGETVEVATIGTFAGTVSVRFAYFNGLGVYVIDAPHLFMRDGNPYHDSNYQD
                     YPDNYKRFALLGYIGAQLAQGLDHWWGTAQVLHAHDWQAGLACAYLKSWGSNVKTLFT
                     IHNIAYIGRFNAFHLAELGLPWEFFHAEGLEFYGEISYLKAGLYFADRITTVSPTYAR
                     EITEEIAGAGLHGLLATRQYQGRLRGILNGVDAEVWNPETDTHIVVNYRANYMHGKAK
                     NKAELQRIFGLPEDKEALLMVMVTRLTEQKGADFLLANIDTLMQHKVQIIVLGSGSPD
                     LENALRYFQHKYPNQIGVKIGYDEALSHQIIAGGDLILVPSRFEPCGLTQLYGLKYGT
                     LPLVRRTGGLADTVVDSHKESIENRSATGFVFDYPDAPAFLEAAMRAISLWQKQKLWS
                     SVRQNALAQDFGWAKVAEQYQNLYHEII"
     gene            17051..19551
                     /locus_tag="PXB09_000634"
                     /pseudo
     CDS             17051..19551
                     /locus_tag="PXB09_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
     gene            complement(19633..20349)
                     /gene="trmJ"
                     /locus_tag="PXB09_000635"
     CDS             complement(19633..20349)
                     /gene="trmJ"
                     /locus_tag="PXB09_000635"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDL5232781.1"
                     /translation="MQILNQIQIILVETSLPANIGSAARAMKTMGLTHLRLVAPKQPL
                     DEQAEALAAGAKDVLDNAQCYATFDEAIADCQLVIGTSARLRHLQNTLIEPRDCGELV
                     VNRTNLGKVAIVFGRERVGLTNEELLKCQYHLNFPTNPDYGSLNLAMAVQLASYEIRM
                     AYLQNSGEKQPLAADKDYPTAQALEHFFAHTERLYTELGFIRNDSVMLKLRRLYQRAE
                     LETNELNLLRGMLTAVEKAN"
     gene            20529..22067
                     /gene="pntA"
                     /locus_tag="PXB09_000636"
     CDS             20529..22067
                     /gene="pntA"
                     /locus_tag="PXB09_000636"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDL5232782.1"
                     /translation="MLIGVPRELLDGETRVAATPKTVEQIKKLGFDVLVEQDAGFKAS
                     FEDNTFLNAGANIGTQQEVWNADIIFKVNAPTEAEIELIKEGVTLVSFIWPAQNPQLM
                     EKLQSKKINVLAMDAVPRISRAQALDALSSMANISGYRAVIEAANAFGSFFTGQITAA
                     GKVPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDSRPEVKEQVKSMGADFLEIDFEE
                     EGGSGDGYAKVMSEEFNRRAMALYAEQAKEVDIIITTAAIPGKPAPRLITKEMVDSMK
                     PGSVIVDLAAATGGNCEYTKAGEIVVTDNQVKVIGYTDFPARLPTQSSQLYGTNLVNL
                     LKLLAPNKDGQIEINFDDVVLRGVTVVRDGELTWPAPPIQVSAQLQKQAAAPQAVKKE
                     EKPADPRVKYGVMAAAGVLFLWLASVAPAAFLSHFTVFVLACVVGYYVVWNVSHALHT
                     PLMAVTNAISGIIIVGAVLQIAQPTGNFFIDILAFIAILVASINIFGGFKVTQRMLAM
                     FRKG"
     gene            22082..23527
                     /gene="pntB"
                     /locus_tag="PXB09_000637"
     CDS             22082..23527
                     /gene="pntB"
                     /locus_tag="PXB09_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDL5232783.1"
                     /translation="MSFGFVTAAYIIAAILFIMSLAGLSKHETAKAGCWYGIVGMAIA
                     LVATIFGPQSHGTIWILIAMAIGGFIGVKKALKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYGLHTNALMPANLDETAQAAFLAEQATLANIHNVEVFLGIFIGAVTFSGSLVAFG
                     KLSGKLFGRKVSSAALNIPHKHKWNLAAIIVSVFLMIVFLNNPHNIFPVLIMTIIALV
                     FGWHLVSSIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYI
                     MCKAMNRSFISVIAGGFGNEVQSGKGDEEYGEHRETKAEEVAEMLKNASSVIITPGYG
                     MAVAQAQYPVAEITAKLREKGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDE
                     INDDFEETDVVLVIGANDTVNPAALDDPSSPIAGMPVLEVWKAQNVIVFKRSMAVGYA
                     GVQNPLFFKENTQMLFGDAKERVDDILRALN"
     gene            complement(23594..24520)
                     /locus_tag="PXB09_000638"
     CDS             complement(23594..24520)
                     /locus_tag="PXB09_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5232784.1"
                     /translation="MKPIFLEIRHLRTLIALKESGSVSLAAKRVHLTQSALSHQIKLL
                     EEQYDLTLFERKSSPIRFTPAGERLIKLAYDILPKVIEAELDLARVKQGEVGEVRVAV
                     ECHTCFDWLMPAMDTFRQHWPLVELDIVSGFHTDTVGLLLSHRADLAIVAEEEDSAGI
                     IYKPLFSYEMVAICSKDHPLATKDVWEAEDFKDETLITYPVPDDMLDLLRKILGPAGI
                     KVTRRNSELTIAIIQLVASRRGIAALPYWAVKPYLDRGYVVARKITQQGLYSTLYGAI
                     READATLAYLDDFHDTVKSQSFATLPGLMVLE"
     gene            complement(24630..25745)
                     /gene="asd"
                     /locus_tag="PXB09_000639"
     CDS             complement(24630..25745)
                     /gene="asd"
                     /locus_tag="PXB09_000639"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDL5232785.1"
                     /translation="MQNVGFIGWRGMVGSVLMDRMVEENNFANINPVFFTTSQAGQKA
                     PVFGGKDAGELKNAFDIEELKKLDIIVTCQGGDYTNEVYPKLKETGWNGYWIDAASAL
                     RMKDDAIIVLDPVNQHVISEGLKNGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVA
                     TYQAASGAGAKNMRELLSQMGELEDSVKAELANPASSILDIERKVTAKMRAEDFPTEN
                     FGAALGGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSDNPIPVDGLCVRIGALRC
                     HSQAFTIKLKKDIPLAEIEQIIAAHNEWVKVIPNDKETTLRELTPAKVTGTLSVPVGR
                     LRKLAMGGEYLAAFTVGDQLLWGAAEPVRRILVQLTQ"
BASE COUNT         7365 a         5159 c         5799 g         7678 t
ORIGIN      
        1 tacttttttt gccctattac tcggcttttt ccaatatagc ttttggtttg gaaaaaatgg
       61 ttggagtgat tatcaagaag tgcaagaaga aattgcttta ttaaaagtag aaaacacaaa
      121 gcttacttca cgcaataaac taattgaagc cgaaatttac gatttaaaga acggcgtaga
      181 tgcacttgaa gagagagcaa gacttgaacg agaaatggta aaagagaacg agatgttcta
      241 ccgaattgta ccaaaaaaca aataatacat aattgatata ttatgaagcg aaaaattatt
      301 gcagtaattc cggcgtcagg agttggtagc cggatgcaag cagaaaaacc aaaacaatat
      361 ttacaattaa agggtaagac tatcttagag catacagtgt ctatttttct tgaacaccct
      421 catgttgaaa aagtgattgt agcggtggca agaaaagacc ctttttattc cacattggaa
      481 ctcctaaaat cccctaagat ccaacttgtt tttggaggag aaacgagagc agattcagtg
      541 ctaaatgcct tacaggaaat caacactgaa aatgcttggg cattagttca cgatgcggct
      601 cgcccttgcc tcaagcggtc agatttagat aaacttttgc aaattaacga tccgcaaggt
      661 ggcattctcg ccattccagc ggtagatacg atgaaaagag caaacggcac gaaaatcgca
      721 cacacagaag atcgctcaac cttatggcac gctttaaccc cacaattttt tcctgctcaa
      781 gcattaaaac aagcattatc ctctgctttt gccaataagc ttcaggtaac agacgaagca
      841 tctgcaatgg agcttgcagg ctaccagcca caattggttt caggtagaag tgataatatc
      901 aaaatcactc gccctgaaga tttagcctta gcggaatttt accttacaca taatttggag
      961 aactaaaatg atacgtattg gacacggttt tgatgttcac gcttttggcg aagatagacc
     1021 actgatgatt gctggggttg aagtgcctta tcatacaggc ttcattgcgc atagtgacgg
     1081 agatgtagcg ctgcacgctt taacagatgc gttgcttggc gcagcagctt taggtgatat
     1141 tggcaaatta ttccctgata ctgatatgca atacaaaaat gccgatagtc gtggtttgtt
     1201 gattgaagct taccgacaag tgcaagaaca gggctatcaa gtcggtaacg tcgatgtaac
     1261 cattattgct caagctccga agatgcgacc gcatattgat aaaatgagac aggtgatcgc
     1321 agacgatcta caatgcgata tatcacaagt gaatgtaaaa gccactacaa cagaaaaatt
     1381 agggtttacc gggcgaggtg aaggcatagc ttgtgaagcc gtagcattgt tactaaaaag
     1441 ggcatagctt agagaagtga ggaagcggtc ttattttcat tagcgttttg tgcgtttagc
     1501 gaaaaatacg caattttttt gagaaatatg accgcttgta ttgttttaaa ttgggcggaa
     1561 actaccagct tcctccagcg cctccaccgc ctgatgaacc accaccgaag ctgtcgccac
     1621 tgcctctgct tccgccaaaa ccaccaccga agcctccgcc aaatccacct gagcctcgat
     1681 caaagccacc tccgagacca ccgccaaagc ccccacctct gcgttggctt tctcttagta
     1741 tttgtcctag ttgatccatt gagctgggac taatataggt actgtttcct cgtgggcgga
     1801 aaattaggaa aatcacaatg ccggcaaaca agaaaaagag taagccgtct atgtcatcaa
     1861 attcttgcat ttcttcgcca taacttgcat aaggggcata ttccccgtta atggctgcca
     1921 taatggcgga taagccatgg gcgataccgg ctgcatattg ctcttgtttg aagaatggcg
     1981 tgatgtcatt gcggataatg ctcgatgcaa tcgcatcagg taacgctcct tcaagcccac
     2041 gtccggtggc aataaagagt ttgcgatcat ttttggcaat taataacaat ataccattgt
     2101 tctcgttatt tttgctccgt ccgattcccc atttgttaaa cagggtatga gcataggttg
     2161 aaactgcctc gccttccgtg cttggaataa tcaccacggc aatttgcgaa cttgtcttgg
     2221 cacagttagc aattaaggca tcttctaatg tccgccattc ttgttggctc aaggtgtttt
     2281 tggtgtagtc cgtaatataa taaaacggat taggcggctc tgggtaggtc accgctgtgg
     2341 catttaggct aaacagagcc aagcacacca ataacaagcg gttgaaaata gatagaaatt
     2401 tgcaaaggga tttcatcatt tgactaccac ctcgtttgaa agctcgtttt tatcatcagc
     2461 ctgataaggg aaatggtgag cgagcggagc ttccaccatt ttgattgcat cacaaatggc
     2521 ttgggtgtaa tcgccttgtt ggcagtccaa acacattgtg gcatagattt tttgccaaaa
     2581 atcgttatcg actttttgat gaatgccttc atcgccaata atcgcagcgt agtgaggctt
     2641 gaatgaaagg tagatcaaca caccgttatg ttcagccgtt tcacgcattt ttaattcatc
     2701 gaaaagctca cttgctcgca acatagcggc gttgtcggtt ttgccgattt tggcttttcg
     2761 ttccaccacc acacgcaatt cggcagaggt tttttgctct aaatcggcaa ttgcttgttc
     2821 aatgcgttgc gtatctatcg gtaatttgtt ggagagaaaa gaaaataatc ccatttgttc
     2881 cccttaaaaa taaagcaata agcaccggat ttgaaagagc ttattgcttt taatatgaat
     2941 aaattgaaac taaaattagt tgaagtttac ggttggtgct ttatcagaac ctgcttcaga
     3001 tttaaattgc ggttttgctt taaagcccat aatcattgcc gctaatttag tcgggaattc
     3061 acgcacttgc ttgttgtact ctttcacttt ttcgttaaag ttattgcgtt caacgttaat
     3121 gcggttttcc gtaccttcta attgagcttg tagatttaaa aacgcttcgt gggcttttaa
     3181 ttcagggtat ttctcaactg aaaccaataa gcgtgaaaga gcagagttta caccttgttg
     3241 ggcttcttgg aatttagcca tttgctcttc agttgcattg cttgggtcaa tggttaccgc
     3301 agttgctttt gcacgagctt caatcacaga ggttaaagtt tctttctcaa agttagcctg
     3361 accttttacg gtattcacta agtttggaat taaatccgca cggcgttggt aagccgattc
     3421 aacatttccc catacggagt tgatgtcttc ttctgcacgc attaaatcgt tgtattttgt
     3481 taaagaataa ccgccaacag caagcatggc gatcagtaaa atccaaaaaa tctttttcat
     3541 tatgaagtcc tataatataa ataaaagagt gaaaaattgg gagcattgta tcgggaaaaa
     3601 tcgaatatag ctagcttact tacaaatttt ttcatactat ggggcgtaga taagatttgt
     3661 aaatttttgt tcaaagtcaa ccgcttgttg tttgattgtt gataagagga aagccaaatg
     3721 ctcaaaggaa ttttagcttc gcttgcagcc aatgtgctgt ttggagcagt ttactatttt
     3781 gcgatattgc ttcgcccgtt agagggagag gcgatgttcg gctttcggat agtggtagtc
     3841 attccgttta ttttgctggc gattatattg tttaaacagc aatcggcttt tgcggatctt
     3901 ttgcaaaaaa ttcgacaaaa tccaccgctt gtattggtca ttttgctcct tgctctcaac
     3961 accggcgtgc agctttggct gtttttatgg gctcctaatc acgggcaggc gttgcaggtg
     4021 tcgtttggtt acttgctttt accgattgtg gcggtggctc taggaaaaat ggtgtttaaa
     4081 gaacatttta cccgcctgaa atggctttct ctacttttcg cagtcatcgg tgttggcagt
     4141 agtttgtttt ttaacagcac gatttcgtgg gcgacttggg tagctgggtt gggttatccg
     4201 ctttatatta cccttcgccg ttattttcaa atcaacacgt tagctacttt ttttgtggag
     4261 ttgttactgg tattacccgt tgcactttat tatctcagcc aagtggaaat gacgccaata
     4321 gtggcagaaa atccgcaaat ttatttctac ctcggattgc tggggctggt aagtggcagt
     4381 gcttttattc tttatatcct ctcgagcaat ttattaccga ttaatgtatt aggtttactg
     4441 ggctatgttg aaccgttggt gatgttgctg atttcttttg ccatcggcga aaaactcgat
     4501 gccaattcct atattttgat ggtctgtttg ctggtttcga ttggattatt gagttgggat
     4561 agttttcgta gcaaggtgtg ataattaagg aaaaataaat cgcttgtaga gcaagcggtt
     4621 taaagattat ttgaccggtt tcaatagacc tgcttttttt gctcgctgat aggcttgctt
     4681 aaaagcgatt aagccttctt gctttaaacg aacggaaact ggacgttgtt gattcatttt
     4741 agatttcctt ttggcgtaat taaaatgaaa caatcttgat taacgcccaa gggataaacc
     4801 acttggaaag attgcataaa atcacatcgt ggcacacaca tacgctgata cattcggtta
     4861 agtgaatctc tctcggcaat gaagagatag ctttctggtg taaaacgtac ataatgctca
     4921 aataataaac gctcaagggt ttcttgtaaa gcaattattt ctttacgttt gaactgatga
     4981 ttcgctgcgg gggcataaat gtcaatatta gaaccgctat tttctagatg ctctttcgcc
     5041 ataaatttga ttgtgcaaca ggaataggtg tttatatagt ttgtgatatc tttgcctaat
     5101 gcggacaaag tcgatataac atcggcatct gagcagaaat taatgataaa tgcgacatta
     5161 gcaatagtaa attcactgta ttgataagaa attccactat caggatcggt aaattcaata
     5221 aactgcatag tatctcctcg tagcaaaatc ataacgagtt gatattattc gtaaagtgat
     5281 gaaaatgatt ttttcgatct cgatcgcaaa aataatattt tagacttgat atttcgatga
     5341 aatagaattc agtaagtacc aatatgatat aaaaacggag cgtttcgctc cgtttttgtt
     5401 tgtatttgtg tttgtgcttt attctgcttt ttgtttgata gcggcataga ctacgccggt
     5461 gactaatgag ccgatggcaa tagcagctaa gtacattaac ggttgtgaaa cgaatggaat
     5521 cacgaataaa ccgccgtgtg gggcttgtag ggtaatgcct agtgccattg aaattgcacc
     5581 ggcggttgca ccgcctaaga ttgagctggc aattacacgc acagggtctg ccgccacgaa
     5641 cggtaatgcc ccttctgaaa taaagcataa acctaacacg aatgaagctt tacctgcatc
     5701 acgttggttg gtgttgaatt tgctacgagc aatcagggtc gcaatcgcca taccaattgg
     5761 tggaaccata cctgccgcca tcaccgctgc cattggcata tattgttgtg aagcaattaa
     5821 acccacacca aaggtataag ccgctttatt caccggacca cccatatcgg tacacatcat
     5881 cgcaccgaga ataataccta aaataattgc attggtttgc cccattgtgt ttaaccattc
     5941 cactaaggca tccattaatg ctttcaccgg tgggttgatg acataaatca tcagtaagcc
     6001 gacaatcgct gagcctaaga gtggtaaaat caaaataggt ttaagtgagg ttaaacttgc
     6061 cggtagctga atcgcaccat ttaagaattt tacggtataa ccggctaaga aaccggctac
     6121 gataccacct aaaatccctg ctcctgcggt ggtagcaagc ataccgccga taagaccgac
     6181 agctaacccc ggacggtctg caattgagaa cgctacatag cctgcgaata ccgcaatcat
     6241 taagtggaat gccgcaccgc caccaatatc cattaaggct ttcggcaagc cgcctgcgat
     6301 ggtttcatct ttaaaggctt caattccgaa cataaaggaa atagcgatga gcaagccacc
     6361 tgctaccacc agcggtaaca tatgtgatac accggtcatc aagtgtttat ataacccttt
     6421 tttctcagaa gttggagctt cagcattatc cgcttttgcc acaccacctt cgtaaatttt
     6481 cgcttgagca aaggcttttt caaattcttg agtggttttc ttcaatgcta aaccggttga
     6541 ggtgcgatac atcggcttgc ctttgaattt ttccaaatcg acatcaatat cggcagctac
     6601 aaagactaaa tctgccgctg cgacttcttc ggcggaaatt ggatttcctg ctcctacttg
     6661 accacgggtt tcaaccttga tgttccaacc ctgtgctttg gcataatttt cgattgcttc
     6721 cgcagacata aaagtatgag ccacgccagt tgggcaagcg gtaacagcaa cgatattttt
     6781 cacaccagat gaaaccgctg aaaccgcagt ggttgcggta gcatttgcaa aagtttgtgc
     6841 attttcgacc gcttgtttga gactggcttc aggttgagca aaggcttgtt ctaagtccaa
     6901 aattgcccct tgcttgccgg cagcttcttg tggaattgcg ttatcgaata acaccacaaa
     6961 atcagcttgg tttgccgcca caacattgtg tccttgttgc ttggcagcgg cagataacat
     7021 ttcattcact aagaaacggc gtgcgttgcc tagtgtttga ggaaatacaa aagaaatatt
     7081 catattggtt tgttcctttg attgaggttt aatgattttc tgaaatcacg gtaatgtcgg
     7141 tttgtttaat aatatcgtct aacgccgcac ggtctgcaat cccaacgtta ctttgaacaa
     7201 cagctagagc agaagtagct gaggcaaaac gcaaggtctg ctctttgctc caaccttgag
     7261 ataagccgta gatcaagctg gcaaccattg aatcaccagc acctacagtg ctaactacat
     7321 tttcgcaacg tggtgggcgg gcttgtaaca cgccttcgtg atttagccaa agagagcctt
     7381 gttcgcccat tgatataatt acattttcaa taccacggga acgtaattgt ttagctgcac
     7441 taataatctc ttcgattgag ttgagtgaat gcccgaccag cacttccagc tctcggcggt
     7501 ttggttttac taaccaaggg tgagcggtta agccggcggt gagagccgca ttgctggtat
     7561 ctaacaccac ttttaagcct tggcggtgta aagattccaa ccaagaagca aatttttccg
     7621 gcgttacgcc acgagggaga gatccacaca ctgcaactaa gtcaaatttg ctttcccact
     7681 gatgagataa tgtgacgaat ttttcccaat cgctttccga aatttcaaag ccgagaaagt
     7741 tcagatcagt tacatcagcc tcggtttcag tgattttgac attaatgcgg gttttaccgt
     7801 taatacggta aaattcatca gccaaatcat tgtgtttaaa ggcatttacg aaatcgcctt
     7861 gattttcttc gcctaaaaag ccggtaaccg aaagttttgt gcctaagtca gctaaaactt
     7921 tagcaacgtt aatacctttg ccggcagggt ataaaccaag ggtttctacg gtgttcactt
     7981 cgccgatttc aatacgttga agtttgccga ctaaatcaaa ggcagggttg agggtaacgg
     8041 ttgcaatacg cataatgatt cctcgcttat tcgcctaaac ctgcttcaat cgcagcaccg
     8101 attgccgcaa gtgctacttc ggcatcatca ccgcttgcca caaagcgtag cgtcgtgcct
     8161 ttggttacgc caagggcaac aattttcatt aagcttttgg cacttacaag cggtgaattt
     8221 ttatcaacat tttgcacttc aattttggcg ttgaattttt tcacttcatt caccaacacc
     8281 gcacttgggc gagcgtgtaa accgtgttcg tttttaatta caaaagttgc ttctttcgta
     8341 ttggcatcga cagcagtcgc agtttcttcc gcaggaattg ctgaaacagc aatgctttca
     8401 atcgtatctg ccaccgccgg tacgaatgaa acactttcgc ctaagccgtt aataattgct
     8461 tgttgtaatg cctcaatcgc ttgttgggcg tcttctccct ctgccacaaa gcgtaaacga
     8521 tgcccttggc ttgcccctag tgctactact ttcattgcac ttttcgcact tgccggtgca
     8581 gtgttgcggt ctaaattttc aacgctgatt tttgaggaga acggtttcac cgtttgtact
     8641 aacaccgcag ccgggcgggc gtgtaagccg ttgtcgttac gaatggtgaa tgtgccaacc
     8701 acttggttgc cactcgcttc gacattggtt acaggggttg aagctacgct ttcgcctttt
     8761 aataaaccaa gcatttgctc cgcagagaaa tgagcaaact ggcttcttac ttctggtttt
     8821 aataattgag ttaatagtgg ctgtagagca ttgtcggttt ctgccacagt tagtagggtt
     8881 tgaccttgcg tattacgggc aatagcgata ccgttagctt ggttgccttt ggcggaatcc
     8941 accacaaata gattattgcc taaatgtaac gctttgttgg caaccacatc gctgatgaat
     9001 gcttgggaaa catagccttg ctcttgtagt tttgcggcgt taatggctga taaagtgata
     9061 gggcttgaag attcgatatt cagagaaatc agctcttgag ataaggcagg aaggtttttc
     9121 ttaccgctta atacggcaat aaattcatct aaattttgcg ttttcgctaa tgtggcagca
     9181 gcctcttcat cacttaatac agtggtgagt tgacggagta aggttaagtg ttcgtccgat
     9241 ttagccgcaa tcccgataac tacataagca gtgttgcctt cgccccattc cacgccttgc
     9301 ggaagttgga taatttgcac gccggtttct ttgactaaat cacgggtatc aagcgtgccg
     9361 tggggaatag caattccgtt acctaaaaaa gtagaggttt gggtttcacg attaagcata
     9421 ccgacttcat agccggctgc tacattgccc ttggcgacta attcggcggc aacaaaacgg
     9481 ataacttctt ctttgttgct tgctgaacca tttaaacgga tgttttttgc cgataaatta
     9541 agcattttag ctccttggat ttaaagttga tttttaaact gtaatgttat ggttagttta
     9601 ctctatattt tgctaaaccg ttatagccaa ctaaaaatat ccataaaaat gtttcaaaat
     9661 gtgatctatg tcacaaaatt taaggtttga tgatttaaac taaagattaa aacgatttta
     9721 ttttgtgatt tagctcaaaa aatggcgtaa atccacttct tttatttcta tttagtgata
     9781 gagtgagaac tattgaaatt taagtattaa acgctttaag caaggagtgc cgatgcaaga
     9841 ctatacttat tctgaaaaag atgctttttt tgttgagcga ctttcttcgg gttcttgtaa
     9901 tgatcctttc tcctacctag gtattcaccc tagcaataac ggcgttatta ttagggtatt
     9961 tcttccttct gccatagctt gccaagtgat cgatttaaac ggaaagcctg tgtcatcaat
    10021 gctaaaaatt gatgatagag gcttttttat tgcagagctg attggtaaaa aaacagattt
    10081 ttcttaccgc ttgttggtgg aataccctga ttcaacggtg gatatagaag acccttaccg
    10141 ttttaaaacc catattcaag agcttgataa ttggttgttt gcggaaggaa aacaacttcg
    10201 cccgtacgaa aaattaggcg cacatttagt cacacaaaat gaagttgggg gtgtgcattt
    10261 tagcgtctgg gcgccgaacg ctcagcgggt ttccgtggtt ggggatttca accactggaa
    10321 cggcttggta cattcaatgc gattccaccc cgattccggt atttgggata ttttcctgcc
    10381 gaatgtgaaa aaaggggagt gctataaatt tgaagtgttg gatcgaaacg gcgtgctacg
    10441 gttgaaatcc gacccttacg cctttgcctc ccaattccgc ccagaaaccg catctattgt
    10501 ttccggcttg ccaagcattg tgccagccga gaaaacctgc cgtaatgcga atgctcccga
    10561 taaaccgatt tccatttatg aagtgcattt aggctcttgg cgacgcaaca ttgaaaacaa
    10621 ttattggctt agctatgaag agcttgccga tgaactcatt ccttatgtga aagatatggg
    10681 ctttacccat attgaattgc tgcctatttc cgaatttccg tttgatggct cttggggtta
    10741 tcaaaccacc ggtatttatt cgccaaccag ccgttttggt acgcctgagg gcttgagtta
    10801 ctttatccaa aaagctcacg ataaaggcat tggtgtgatt cttgactggg tagtggggca
    10861 ttttccggta gatgaacacg gcttggttta ttttgatgga acgcatttat acgaacattc
    10921 cgatccgaaa gagggctacc acaaagattg gaatacctta atttttagct acggcagaaa
    10981 tgaggtgagc aattatttgt ctggtaatgc actttattgg attgagcgtt ttgggattga
    11041 tgcgttgcgg gtggatgcgg tggcgtcaat gatttatcgt gattactcac gttcagacgg
    11101 cgagtggatt ccaaataaat atggcggacg tgagaactta gaggcaatcg acttcttacg
    11161 ccacaccaat aatattttga gagacgaaag ccaaggcggt gcgagcattg cagaggagtc
    11221 cacttctttt gccggagtgt ctcactcaac tgaaagaggc ggtttgggct ttaattataa
    11281 atggaatatg ggctggatga acgacacttt acgctatatg caaaaagatc caatttaccg
    11341 ccgttatcac cacaatttaa tgacttttgg tatgacctac caatacagcg aacagtttgt
    11401 gttaccgctt tcacacgatg aagttgttca cggcaaaggt tcattgctga ataaaatgcc
    11461 gggggattgc tggcaaaaat ttgcgaactt acgagcctat tatggctata tgtggggcta
    11521 tccgggcaaa aaattgctct ttatgggcaa cgagtttgct caaggtaaag agtggaattt
    11581 tgccgagagc ttagattggt atttactcgg ggaagaaggg ggcgaatggc ataagggcgt
    11641 attgggttgg gtaaaagccc ttaaccattt atacacccaa acccctgcac tgtttgagca
    11701 agattacaat cctgaaggtt ttgagtggtt agtggtggac gatcacgata attcggtgtt
    11761 tgcttttgag cgtaaagcca aaaatggcga ttcggtgatt gtggtgagta atttcacccc
    11821 gattgtgcgt gaaaattacc gttttggggt gaatgaattg gcagaatatc aggaaattct
    11881 caattctgat ttagcttgtt attgcggtag taatgtcagc aatgcaaacc gatttgccag
    11941 cgagttaatt gcatcgcacg gtaaagccta ctccttgagc attactttgc caccgctatc
    12001 gactatcttc ctcaaaagag ccgcagacaa aaaaacaaaa caaaacaaaa cataacttaa
    12061 agaaacataa aaaataatat gcactatttt agaggtaagc cttttccttt aggcaataaa
    12121 cttgatagac aagcgggtga atttggcaca aattttgcca ttgtttcgca aaatgcaacc
    12181 gctattgagt tatgtctttt tgatgaaaat caccacgaaa cccgtattcc gatgttttct
    12241 tccggagata cttggcacat ttttgtagca ggtgtacaag cagggacaaa atatggctac
    12301 agggtgaaag gcatacaaga tgaacaagcc ggtttgttat ttaatccgca aaaattattg
    12361 actgatcctt acgctaaagc gattgaaggg aagccggatt taagtagtgc agaggcagcc
    12421 gcttggtata aatggaacga tgaacgggat aatgcctctc ttgcacctaa gtctatcgtg
    12481 attgatgagc attttgattg ggaaaatgat agccagttat tcactccttg ggcagagact
    12541 attatttatg aaatgcaggt gaaaggtttt agtcagcgga actttcagat tccaagcgac
    12601 attcgaggca cttttgccgg tttggctcac cctgtttcga tagactattt aaaaacctta
    12661 ggaatcaccg cagtagaact tctacccgtt acttaccata ttgatgaaac ccatttgcag
    12721 aaacaagggc ttgtgaatta ttggggctat aatgtattag gtaattttgc tattgatccg
    12781 aatttagcag cagataagca aaatcctctt aaagagttta aacagctcgt aaaaacatta
    12841 catcaagcac atatcgaagt gattatggat attgtgttta accacacagc tgagagtgat
    12901 aaaaacgggc cgatgctaag ttttagaggc attgacaata cagcttattg gctagataaa
    12961 cagggcgaat acgaaaattg gactggctgt ggtaatacct taaatttgag caatccttat
    13021 atactctgct gggcaatcga ttgcttaatc tattgggtgg aggagtgcca tattgatgga
    13081 ttccgctttg atcttgcctc aattctaggt agaacaccga gtttttctga aaaagcagat
    13141 tttttcacag cacttaaaag ccattctaaa ttaacacata ttaagttgat tgctgagcct
    13201 tgggatattg gtgtagaagg ttatcaatta gggcaattcc ctgagccttt ttatcagtgg
    13261 aatgattgtt atcgtgatga tatacgccgt ttttggttac aaaaccaagg tgattggggg
    13321 cttttggcac ggcgattggc aggaagtgat gatgtgttta ctaaatattc cgtttcaaaa
    13381 agtatcaatt ttattacggc acacgatggg tttacgttac aagatctcac cagctatcag
    13441 caaaaacata attgggcaaa tggtgaacaa aaccgagacg ggcataatag taactacagc
    13501 aataaccacg gtgttgaagg gcagacagca gatgaattgg taaaaaaaca gagagaaatc
    13561 accgcttgta gtttgcttgc tacgctcttt ttatcggctg gtgttccaat gcttttagcc
    13621 ggtgatgaaa tcggacatag tcaacaaggt aacaataata gttattgcca agataatgag
    13681 atcacttggc tagattggga aaatatgaat cacacacggc tggattatgt tcgtagttta
    13741 atccggttgc gtaaaaaaat cgctttgctt tccaagcaga ataattggtg gcaagaggat
    13801 tcggtacaat ggttgaatcc ttctgctcag ctaatgaata ttgacgattg gcataatcaa
    13861 cataatgggc ttgtcgtttt attacaggaa gaatggctgc ttttattcaa tgctaatcga
    13921 caacctcaac cgtttttact gccacaaggc aactggaaag ttgtgttgga gcaggctcaa
    13981 ggtattttga tgacagacac gcaagcggtt acgctcaata atatgggtgt atgcgtactt
    14041 caaaaaagtg atgtaatgtt cgctaataaa ttggagacac aatatgctta accaagaatc
    14101 aacggctctt gttgcaagac aagatttaac caacgatacc ttagtattaa ttcttgcagg
    14161 aggacgaggt tctcgcctat acgaattaac cgataaacgt gcaaaaccgg cagtctattt
    14221 cggtggtagc cgccgtatta ttgattttgc gttatcaaat tgtattaact cgaatttatt
    14281 aaaaatcggg gtgattaccc aatatgcagc acactctttg ttgcgccatt tacaacgtgg
    14341 ttggtcattt ttaccttatg aacgtaacca atatattgat atgttaccgg cacgccaaca
    14401 gctagatgaa aacacttggt atcgtggcac agcggatgcg gtgtatcaaa atatggcgat
    14461 gatgaaatcg cactatagac caaaatatgt ggtgatttta gcaggggatc atatctataa
    14521 aatggactac actcaaatgc tgaaagatca cgtcgatcaa ggtgcaaaat gtactgtagg
    14581 ttgtatcgaa gtgcctcgct cgcaagcaac agagtttggg gtaatggcgg tgaatgaaaa
    14641 gctgaaagtg aaagagttcg tcgaaaaacc agctgatcca cctgcaatgc cgggaaaacc
    14701 ggattcctcg ctagcatcaa tggggattta tgtatttaat gcagattatc tatatgaaat
    14761 gctggaaaaa gaagcctcta caccgggaac ctcacatgat ttcggtaaag atattattcc
    14821 aaaagcagta gagcaaggtg tgctatatgc ccacccattt gaacgttctt gtaaagggcg
    14881 taatgccagt ggggcaattt actggcgaga tgtcggtacg attgacagct actgggctgc
    14941 ccatatggat ttagtttctg aagatccgga attagattta tatgatgaat cttggccgat
    15001 tcacggtcgt ccgcaacaaa ctgcaccggc acgttttttc tataatcgtg cgcgtgccag
    15061 aaccctagat aactcactga ttgcgggtgg ttgtgtgatt accgatgcgg aaatcagtaa
    15121 ttcggtctta tttaaccgtg ttcacgttga agcggagtcg gtgattgaac acacagtgat
    15181 tttaccgcag gtgactatcg gtaaaaattg cgtaattaag cgcgctgtga ttgacagaca
    15241 ttgtgtaatt cctgatggct tagaaattgg tgtaaatgcc gaagaagatg cgaaacgttt
    15301 tcgtgtcagc aaaaatggca ttgtattagt gacacagtca atgttagata aattagcggg
    15361 aaaagaagct aattcggata ttaaatatac aatttagtaa gagatgatat aatgcttcga
    15421 gtttgtcatt tgaggtcgca agctcgaagt attgttatga ttaaagcgct tcaagcggtc
    15481 ttatttttca actattttac acatagaaaa cggttaaaaa tgaaagtttt acatatttgc
    15541 tctgaaatgt accctttaat taaaacaggc ggtttagctg atgtaatggg ggcattgcca
    15601 tttgcgcaac agcaagctgg taatgatgtc agagtgttaa ttccttatta cccgaaagtc
    15661 gcgcaaactt taggggaaac ggtagaagtt gctactatcg gcacttttgc cggaacagtc
    15721 tctgttcgat ttgcttattt taatggctta ggcgtttacg ttatcgatgc gcctcattta
    15781 tttatgcgtg atggtaaccc ttaccacgac agcaattatc aagactatcc ggataactat
    15841 aaacgctttg ctttattagg ttacattggg gcgcaattag cccaaggttt ggatcattgg
    15901 tggggaaccg ctcaagtttt acacgcacac gattggcaag cagggcttgc ttgtgcatat
    15961 cttaaaagtt ggggaagcaa tgtaaaaacg ctcttcacta ttcataatat tgcctatatc
    16021 gggcgcttta atgccttcca tttagcagag cttggcttac cttgggaatt tttccacgcc
    16081 gaaggcttag aattttacgg tgaaatttct tacctcaaag caggtttgta ttttgctgat
    16141 cgcattacta ccgttagccc gacctatgct cgtgaaatta ctgaggaaat tgccggtgca
    16201 ggcttgcatg gtttactggc aacccgtcaa tatcaaggta gattgcgtgg cattttaaac
    16261 ggggtcgatg ctgaggtgtg gaatccggaa acggatacac atattgtggt gaattatcgt
    16321 gcgaactata tgcacggtaa agccaaaaat aaagcggaac tccaacgaat ttttggtttg
    16381 ccagaagaca aagaagcatt attgatggta atggtgactc gtttaactga gcagaagggg
    16441 gcagatttct tactcgccaa tatagatacc ttaatgcaac ataaggtaca gattattgta
    16501 ttgggaagtg gatcgccaga tttagaaaat gcgctacgtt atttccaaca caaatacccg
    16561 aaccaaattg gggtgaaaat cggttatgac gaggctttat cgcaccaaat tattgcaggt
    16621 ggtgatctga ttctagtacc aagccgtttt gagccgtgcg gattaactca actttatggg
    16681 ctgaaatatg gcactttacc gctggttcgc cgtaccggtg gcttagctga tacggtggta
    16741 gatagccata aagagagcat tgaaaaccgc agtgccaccg gatttgtatt tgattaccca
    16801 gatgcacctg cgtttttaga ggcagctatg cgggcaatca gcttatggca gaaacaaaaa
    16861 ttgtggtcga gcgttcgcca gaatgccctt gctcaagatt ttggttgggc aaaagtggca
    16921 gaacagtacc aaaatttata ccacgaaatt atttaatttg tattcacaac atcatttcaa
    16981 gcggtcgaat ttgcggattt ttttgtaaaa acgaccgctt gcaatattaa aaattaggag
    17041 aatttactca atgagcaggc agtcattaag cccagaaatg atcaaaaatg ttaaaaatgc
    17101 gattttgcac aaaatggtgt tcgctttagg ggtcgaaccc cgtgatgcca gtaagcgtaa
    17161 ctggctcaat gcaaccttac gtgtagtgcg tgatttatct accgaagatt ggttacaaac
    17221 ccgccgtagc caggttgcaa atggtagccg ccgtgtttat tacctttcaa tggaattttt
    17281 aatggggcgt acgttcagta acgcaatgat ttctgaaggt gtgtatgagc ttattggcgc
    17341 tgcgttaaaa gagttagggc aagatctgga agagattatc aatgaagagg gcgtccgggc
    17401 ttaggtaacg gtggcttagg gcgtttagcc gcctgctata tggacagcct tgccacaatg
    17461 aaaattccgg caatcggcta cggtattcaa tatgaatacg gtatgttccg ccaagaaatc
    17521 cgcaacgggg agcaaattga gcaacctgat gaatggttag agaatgaatt tgtgtggcca
    17581 tatctacgtt caagtaagcg tttcccggta cgctttggcg gtaaaacttg gcgtgagggc
    17641 aaaaaagtag tatggcagcc ggaagaagaa attaccgctc aagctcacga ccaactgatc
    17701 ccgggctttg agaccacctc aactaacagc ttacgtttat ggtctgcaca cgcatcgggt
    17761 agagggtttg gcttatctga ttttaaccgt ggcgattatt ttgcagcaat ggttaaacaa
    17821 aacagctcgg aaaacgtctc tcgtgtgctt tatccggacg attctaccta taacggtcgt
    17881 gaattacgct tacgccaaga gtatttcctt tgctcggcat ctgtacaaga tattatccgc
    17941 cgccacgaag cggagttcgg ctcttgtgtg aatttagccg acaaagtggc aactcactta
    18001 aatgacacac acccaaccct tgcggtgcct gagttaatgc gtattttaat tgacgaaaaa
    18061 ggctatggct gggaacaagc gtgggcgatg actcgtaaaa ttttcttcta caccaatcac
    18121 actttgatga gtgaagcgtt agaaacttgg ccggtagaaa tgttagcccg tgtgctacca
    18181 cgccatttag agattatttt cgacattaac gaatatttct tagaggaagt gcgtagccaa
    18241 ttcccggaag atcacgattt gatttctcgt gtttccttaa ttgatgaaca aggcgatcgc
    18301 cgtgtgcgta tggcgtggct tgcggtagtc gcctcagcga aagtaaatgg tgtggcgaaa
    18361 attcactcgg atttaatggt tgaatctatt tttgccgatt ttgcccgtat ttacccaaat
    18421 cgttttacta atgtgactaa tggggtgaca cctcgccgct ggatcaaaat tgccaaccca
    18481 gggcttgcta atattttaga taaatgtatc ggcaataagt ggctgactga tttaagtgaa
    18541 ttggaaaaat tcaacgtgtt tgttgatgat gctgatgtgc aagcacaggt ggcagcggtg
    18601 aaagtagaaa acaaacgtcg cttagccaaa tatgtcgaag aaactcaggg aattaaactt
    18661 aatcctgaag cgatttttga tgtacaagtt aagcgtattc acaagtataa acgccagcaa
    18721 atgaacgtgt tgcatatcat cacgctttat aaccgcatct tgaaaaaccc gactgctgat
    18781 tggacacctc gtgtgtttat cttcgcaggg aaagcggcaa gtgcttatta tgcggcgaaa
    18841 aaagtgattc gtttgattaa tgatgtggca aatgtggtga ataatgaccc tcgcattaat
    18901 gatttaatta aggtggtgtt tattccgaac tacggtgttt cattagcaca aatgattatt
    18961 ccggcagctg atgtttcaga gcaaatttcc ttagcgggta cagaggcctc cggaacctct
    19021 aatatgaaat ttgccctcaa tggtgcttta accattggta cattagacgg tgcgaatgtc
    19081 gaaattttag atcacgttgg taaagagaac atctttattt tcggtaatga agtagagcag
    19141 gtggaagagc ttcgccacaa cggttactca ccgtatcact actacgaaaa agacagcgaa
    19201 ttgaatgagg caatttcaca aattctaaac ggtaaattct caccggaaga tccgtatcgc
    19261 tatcaagatt tgatcttaaa ttcaggtgac tactaccaag cctgtgccga ttatcgtagc
    19321 tatgtggagg ctcaagaaaa agtggctcaa gcctatcgta acaagaaagc ttggacacgt
    19381 tcagccatca tcaatattgc caatatgggc tatttctcct cagaccgctc ggtgatggat
    19441 tatgcgaaaa atatttggca tatcgaaccg atgagcgaag aacaattaaa aggcgattct
    19501 acaatgggca gtattattga aagttcaaat aaactgttga atttaaaata atgatttaga
    19561 gaaaacgagt aatcttaccg tttttgtttt agtcagggat tttgcaaatt tctactaaaa
    19621 attaaccgct tgtcaatttg ccttctccac cgccgtgagc attcccctca gtaaattcag
    19681 ctcattagtt tccagttcgg cacgttggta taaacggcgg agttttagca tcactgaatc
    19741 attgcggata aagcctaatt cggtatataa gcgttcggtg tgagcaaaga aatgctctaa
    19801 ggcttgagcg gttgggtaat ccttatctgc tgcaagcggt tgtttttcgc cagaattttg
    19861 caaataagcc attcggattt cataacttgc gagctgtact gccattgcca aattcagaga
    19921 accataatca ggattggttg ggaaattcaa atggtactgg catttcaata attcttcgtt
    19981 ggttagcccc actcgctcac gtccaaatac aatcgccact ttgccaagat tggttcgatt
    20041 taccactaat tcaccacagt ctcttggttc aatcagggta ttttgcaaat ggcgaagtct
    20101 ggcactggtg ccgatcacca gttggcaatc ggcaatggct tcatcgaaag tggcgtagca
    20161 ttgagcgtta tccaacacat cttttgcccc agcagcaagg gcttcggctt gttcatcaag
    20221 cggttgtttt ggggcgacta atcgcaaatg ggttaagccc atcgttttca ttgctcgggc
    20281 tgcggaaccg atatttgccg ggagtgaagt ttcaacaaga atgatctgaa tttggttgag
    20341 aatctgcatt ggttttgttt cttttttgtt aaatttagcc tgttaatagt gtagcaaaaa
    20401 tttagcctgc ttaaaatttg aaaaaatggg aaataatcgg tttaattggg cataattttt
    20461 tacctatttg ttttatttag tggtacattt agagcgtttt taatcacaac aaccatacag
    20521 gagtctttat gcttattggt gtaccaagag agctgttaga cggtgaaact cgagtggcgg
    20581 caacgccaaa aaccgttgag cagatcaaaa aacttggctt tgacgtactt gtggaacaag
    20641 acgcaggttt taaagccagt tttgaagata atacattttt aaatgcaggt gcaaatatcg
    20701 gcacacaaca agaagtttgg aatgcagaca ttatttttaa agtgaatgcg ccgacagaag
    20761 ctgaaattga gttaatcaaa gaaggggtaa ccttagtcag ctttatttgg ccggcacaaa
    20821 atccacaatt gatggaaaaa ttgcagtcta agaaaattaa tgtgttggca atggacgctg
    20881 tgcctcgtat ttcccgtgcc caagctctcg atgctttaag ttcgatggca aatatttcgg
    20941 gttaccgtgc ggtgatcgaa gcggcaaacg cttttggtag cttctttact gggcaaatta
    21001 ccgcagcagg taaagtacca ccggcaaaag tgttggtaat tggagccggt gttgctggct
    21061 tggctgcaat cggggcggca aatagcctgg gggcgattgt gcgtgccttt gactctcgtc
    21121 ctgaagtaaa agagcaagtt aaatcaatgg gggctgattt cctcgaaatt gattttgaag
    21181 aagaaggtgg ctcaggtgac ggctatgcga aagtgatgtc ggaagagttt aaccgtcgtg
    21241 caatggcgtt atatgccgag caagccaaag aggtggatat tattattacc accgctgcca
    21301 ttccgggcaa acctgctcct cgtttaatca ctaaagagat ggttgattca atgaaaccgg
    21361 gttcagtgat tgttgattta gccgctgcaa ccggtggtaa ctgtgaatac accaaagccg
    21421 gcgagattgt ggtgaccgat aatcaagtga aagtgattgg ctataccgat tttcctgcac
    21481 gtttaccaac gcaatcttcg caactttatg gtactaactt ggtgaattta ctcaaactgt
    21541 tagcaccaaa taaagatggt caaattgaga ttaattttga tgatgtagtg ttgcgtggcg
    21601 taacggtggt gcgtgacggc gaattaactt ggccggctcc gccgattcaa gtatctgccc
    21661 aactgcaaaa acaagcagcc gcaccacaag cggtcaaaaa agaggaaaaa cctgcagacc
    21721 ctcgagtgaa atatggcgtg atggcagcag caggtgtgct gttcctatgg cttgcatctg
    21781 tggctccggc agcgttttta tcgcatttta ccgtattcgt tctcgcttgt gtggtagggt
    21841 attatgtggt ttggaacgtc agccacgcac tacatacccc attaatggcg gtaacaaatg
    21901 cgatttcagg gattatcatc gtaggtgcgg tattacaaat tgcccaaccg accggtaatt
    21961 tctttattga tattttggca tttattgcga ttttggttgc cagcatcaat atttttggtg
    22021 gctttaaagt aacgcaacgt atgcttgcaa tgtttagaaa aggttaagga gaaacgaaac
    22081 tatgtctttt ggatttgtga ctgctgcgta cattattgca gctattctct ttattatgag
    22141 cttagccggt ctttctaaac acgaaaccgc caaagcaggt tgttggtatg ggattgtggg
    22201 tatggcgatt gctttagtgg caaccatttt cggcccgcaa tcacatggca cgatttggat
    22261 cttaatcgca atggcaatcg gtggattcat cggggtgaaa aaagccctaa aagtagaaat
    22321 gaccgaaatg cctgaattag tggcaattct acacagcttt gtcggtttag cagcggtatt
    22381 ggttggtttt aacagctacg gacttcatac caatgcatta atgcctgcaa atttagatga
    22441 aactgcacaa gcggcatttt tagcggaaca agccactctt gccaatatcc acaatgtgga
    22501 agtgttctta ggtattttca ttggtgcggt aaccttctcc ggttcattgg ttgcctttgg
    22561 taaactaagc ggtaaattat ttggtcgtaa agtctcttct gcagcactga atattccaca
    22621 taaacacaaa tggaatttgg cagccattat cgtttctgtt tttttgatga tcgtgttttt
    22681 aaataatccg cacaatatct tccctgtgct gattatgaca attattgcgt tagtcttcgg
    22741 ctggcactta gtttcttcta ttggtggggc ggatatgccg gtggtagttt caatgctgaa
    22801 ttcttattca ggttgggcag ccgcagcggc aggctttatg ctaagcaacg atttattaat
    22861 cgtaaccggt gcattagtgg gatcatcagg tgctatcctt tcttatatta tgtgtaaagc
    22921 aatgaaccgc tcattcatta gcgtgattgc cggtggtttt ggcaatgaag ttcagtctgg
    22981 caaaggtgat gaagaatacg gtgaacaccg tgaaacgaaa gccgaagaag tggcagaaat
    23041 gctgaaaaat gcaagctctg tgatcatcac gccgggttat ggtatggcag tggctcaagc
    23101 acaatatccg gtagcggaaa tcaccgcaaa attgcgtgaa aaaggcgtga atgtgcgttt
    23161 tggtattcac cctgtggcag ggcgtttacc ggggcatatg aacgtattat tggcggaagc
    23221 gaaagtacct tatgatgtag tgctggagat ggacgaaatc aatgacgatt ttgaagaaac
    23281 cgatgtggta ttggtaatcg gtgcaaacga taccgtaaac cctgctgcat tagacgaccc
    23341 atcaagccct attgctggaa tgccggtgct tgaagtatgg aaagcacaaa atgttatcgt
    23401 gttcaaacgt tcaatggcag taggctacgc cggtgtgcaa aacccactgt tctttaaaga
    23461 aaatacccaa atgctatttg gtgatgcaaa agaacgtgtt gatgatattt tacgggcgtt
    23521 aaattaaatt taaataaaaa agcgaacata agttcgcttt tttgtgctta ggctaacata
    23581 aattgttaat tttttactct aataccatca atccgggaag agtcgcaaaa ctctgcgatt
    23641 ttacggtatc atggaaatca tctaagtagg ctagggtagc atcggcttct cgaatagcgc
    23701 cataaagggt gctatatagt ccttgctgag ttatttttct tgccaccaca taccccctat
    23761 ctaaatatgg tttaaccgcc caataaggta gtgcagcaat gcctcgccga cttgctacta
    23821 gctgaataat agcaatagtt aactcactat tacgccgagt aactttgatg ccagcagggc
    23881 ctaatatttt tcgcagtaaa tctagcatat catcaggtac tggataggta attaatgtct
    23941 catctttaaa atcttcagct tcccatacat cttttgtggc aagagggtga tctttagagc
    24001 aaatagctac catttcatat gaaaagagag gtttgtatat aataccagca ctatcttcct
    24061 cttcagcgac aattgccaga tctgcacgat ggcttaatag caaaccaacc gtatcagtat
    24121 ggaaacccga tacgatatct aattcaacta gaggccaatg ttgacggaaa gtatccattg
    24181 ccggcattag ccaatcaaaa caggtatggc attctactgc aacacgtacc tctccgactt
    24241 ctccttgttt cactcgggct aaatctaatt cagcctcaat gactttgggc aaaatatcgt
    24301 aggccaactt aattaaacgt tcgccagctg gtgtaaagcg aataggggag ctttttcgct
    24361 caaatagcgt aagatcatac tgttcttcca gtaattttat ttggtgtgaa agtgcggatt
    24421 gtgttaaatg gacacgcttt gctgcaagag atacgctacc gctctctttt aatgcgatta
    24481 atgtccgcaa atggcggatt tcaagaaaaa tcggtttcat aatttattca tctaaaagtg
    24541 aaaaaagatg aaaataatta taacaaacaa gcggtcaaat tctgcaaaaa atttgcaaaa
    24601 tccaaccgct tgtatagagc agtggcgaat tattgggtta attgaactaa aatgcggcga
    24661 acaggctctg ctgcacccca taataattgg tcacctacgg taaatgcagc taagtattct
    24721 ccacccatcg ctaatttacg caagcgacca accggcacgc tcaatgtacc ggtcactttc
    24781 gccggggtca attcacgcaa tgtggtttct ttgtcgtttg gaattacttt cacccattca
    24841 ttgtgggcag caataatttg ctcgatttcc gctaacggaa tatctttttt cagcttaatt
    24901 gtgaatgctt ggctgtggca gcgtaatgct ccaatacgca cgcataaacc atcaactgga
    24961 attgggttat cgcttaaacc taaaatttta ttagtttctg cataaccttt ccactcttct
    25021 ttagtttgcc cggtttccgg taataattta tcaatccaag gaattaagct accgcccaat
    25081 gccgcaccga agttctcggt tgggaagtct tccgcacgca ttttagccgt aactttacgt
    25141 tcaatatcta aaatagaaga ggcaggattt gctaattcag cttttacgct atcttctaat
    25201 tcacccattt gagaaagcaa ttcacgcata tttttcgcac cggcaccgga agcggcttgg
    25261 taagttgcta cagaaaccca ctcgaccaaa tctttctcaa ataaaccacc gatagccatt
    25321 agcattaggc ttacggtaca gtttccgcct acaaatgttt taatgccgtt ttttaagcct
    25381 tctgaaatca catgttggtt caccgggtct aatacgataa tagcatcgtc tttcatacgt
    25441 aatgcagaag ccgcgtcaat ccaatagccg ttccaaccgg tttcttttaa ttttggatag
    25501 acttcatttg tataatcacc accttggcaa gttacgataa tgtctaattt ttttaattct
    25561 tcaatgtcaa aggcgttttt taattcgccg gcatcttttc cgccaaaaac aggggctttt
    25621 tgacccgctt gtgaagtagt gaaaaaaaca gggttgatat tggcgaagtt attttcttca
    25681 accatacgat ccattaagac cgaaccgacc ataccacgcc aaccgataaa acctacattt
    25741 tgcattgtgt ttgctcctaa aaatgatgtt ataaagattg tgaataaata caggatttta
    25801 gtgcaaaaat caatgttttt tattgatttg caaagttttg acaaaattta accgctattg
    25861 ttaaaataaa acatcgatta tggtgtattt ttggaaataa atagaatctt ataaataggg
    25921 aaatgctcac aatttatgca ttccaattgt ggtctaatca ataaattttg ccgatatatc
    25981 gataggaagt agatgtaatt a
//
LOCUS       DANLTI010000019        25173 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.019, whole genome shotgun sequence.
ACCESSION   DANLTI010000019 DANLTI010000000
VERSION     DANLTI010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 25173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25173
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.019"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            29..2328
                     /locus_tag="PXB09_000640"
                     /pseudo
     CDS             29..2328
                     /locus_tag="PXB09_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759321.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(2406..3107)
                     /locus_tag="PXB09_000641"
     CDS             complement(2406..3107)
                     /locus_tag="PXB09_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDL5232786.1"
                     /translation="MDLQNRENFLNKLAQRMGRPRQNVPEPIPVLENNHAITRLTDRP
                     QPQLCQEFIDFARVMMADVVEAKEADLPQAIIDICEKYGGASVIVNNDQRLKDLGITA
                     AIQAKYEDSYVWDFNQAETNFEKARTANIGVVYGEYGLAESGGIVLFSDKEFGRSVSL
                     LPEKSVVVLRKSTVLPRVAQLAQILHEKAQRGERMPSCVNIISGPSATADIELIKVVG
                     VHGPVNKIYLVIDDL"
     gene            complement(3112..4521)
                     /locus_tag="PXB09_000642"
     CDS             complement(3112..4521)
                     /locus_tag="PXB09_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDL5232787.1"
                     /translation="MSYLQTNTLPFKQRVEQQVNNEIVRKALVKAQETIGANRQRMVD
                     ELGNWEEWRDDAKAIRNHVLANLDAYLYQLSEKVTQNGGHVFFAETAEEATDYIKNVA
                     KAKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYLLQIVGDKPSHIVVPAIH
                     KDRHRIRQEMHDVLGYQGSETPEEMTAFVRQKIREDFLEADIGISGCNFAVPETGSVC
                     LVTNEGNLRMATTVPKTHIAVMGMERIAPTFKEVDVLITMLARSAVGAKLTAYNTWLT
                     GPRLEGETDGPEEFHLVIVDNGRSKILESEFQEVLRCIRCGACLNTCPAYRQIGGHGY
                     GSIYPGPIGSVISPLLGGYEEFKELPYACSLCTACNSVCPVKIPLAQLILKHREKIAD
                     AGLTPMAERLSIFGFNFANSHPTLWKVGVKVGAKVASKLIKNGKAPVNFGALGEWTKA
                     RDLPTAEGESFREWFNNRG"
     gene            complement(4523..5254)
                     /locus_tag="PXB09_000643"
     CDS             complement(4523..5254)
                     /locus_tag="PXB09_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDL5232788.1"
                     /translation="MNVNFYVTCIADVMKAGVAKNTVLLLEKLGCKITFLEKQGCCGQ
                     PAINSGYTKQALAGMKNLVETFEANDYPIVAPAGSCVYAIKTYPDHFERFGEKEWAER
                     AKKVADRFYDLTDFIVNKLGVKDVGAYLPGKAVYHPSCSLFRKLGIKDEPIALLQHVK
                     GLELLPIKNQETCCGFGGTFSVKMAEISGEMVKEKVANVDTDEPDYLIGADVSCLMNI
                     GGRLSREGKPIKVMHIAEVLMQGGK"
     gene            complement(5398..7002)
                     /locus_tag="PXB09_000644"
     CDS             complement(5398..7002)
                     /locus_tag="PXB09_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDL5232789.1"
                     /translation="MALFLSVFPIVLLIYLMVKRNALPSYVALPLTALLIFVLQLTYF
                     GNDTTLIFANIIAGLGDVLTPITVIFGAILFNRFSEVSGATNTMRKWLGTINPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILVGLGFKPLQVAMLALVMNSVPVSFGAVGT
                     PTWFGMGPLLKDGLLTDAQVLEIGSITALIHSIAAFIIPVMALRLIVSWKEIRQNIVF
                     IYISIFACVIPYFIIAQFNYEFPSLVAGAIGLLVSVWVANMGIGLAKSENHLDGDKAT
                     FGEVAKALLPTGLLIFILVITRIQQLPLKAMLNDATAWIVSSLGFANFEISQGLIFAL
                     KNILGTNVATSYKLLYVPALIPFVVTVLICLPIFSVSGKNTQEIFGTSFKQVKKPFLA
                     LLGAIVMVKLMLIGGVDSMVQIIGKNFAEFTGQSWTLFASFLGAIGAFFSGSNTVSNL
                     TFGTVQYATAQQVGLSVTLILALQSVGGAMGNMVCINNIVAVCSVTGIEKQEGNIIKK
                     TAVPMFVYGVIAAISALFIVPMFYNL"
     gene            complement(7292..8383)
                     /gene="ychF"
                     /locus_tag="PXB09_000645"
     CDS             complement(7292..8383)
                     /gene="ychF"
                     /locus_tag="PXB09_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDL5232790.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVV
                     PMPDPRLDALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGH
                     VVRCFENDDIVHVAGKIDPADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKF
                     ELSIMEKILPVLENAGMIRSVDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPY
                     LDRVREIAEKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEA
                     GAKEAGKWRLEGKDYIVQDGDVMHFRFNV"
     gene            complement(8569..9156)
                     /gene="pth"
                     /locus_tag="PXB09_000646"
     CDS             complement(8569..9156)
                     /gene="pth"
                     /locus_tag="PXB09_000646"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDL5232791.1"
                     /translation="MSEIKLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEP
                     KYFGKVAKINTAQGEVRLLVPTTFMNLSGKAVGALANFYRIKPEEILVAHDELDLPPG
                     SVKLKKGGGHGGHNGLKDIIAALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQ
                     TLLNSAVDEAARCVEVLFKDGMVKATNRLNSFKAN"
     gene            complement(9229..10104)
                     /locus_tag="PXB09_000647"
     CDS             complement(9229..10104)
                     /locus_tag="PXB09_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDL5232792.1"
                     /translation="MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSA
                     YVVFDLNQKKFLEGKNFNLVRPIASVTKLMTAVVFLEENRYGASCQTQILPSDADFLK
                     GTTSPLPKNLNIACSELLKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMT
                     QTYFGDSSGLSSDNVSTVVDLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTN
                     SMVRSQSYQALVSKTGYTREAGYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESM
                     LAKYQCVPNPYRQYD"
     gene            10326..11906
                     /gene="prfC"
                     /locus_tag="PXB09_000648"
     CDS             10326..11906
                     /gene="prfC"
                     /locus_tag="PXB09_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDL5232793.1"
                     /translation="MSYPQEVNKRRTFAIISHPDAGKTTITEKVLLYGNAIQTAGSVK
                     GKGSAQHAKSDWMEMEKQRGISITTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTLTA
                     VDSCLMVIDSAKGVEERTIKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVESVLK
                     IKCAPITWPIGCGKLFKGVYHLYKDETYLYQTGQGHTIQEVRVVKGLNNPELDQAVGD
                     DLAQQLRDELELVQGASHEFDHTEFIKGELTPVFFGTALGNFGVNHFLDGLTEWAPAP
                     QARQSDEREVSPSEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLKHVRIG
                     KDVVISDALTFMAGDRSQAEEAYAGDIIGLHNHGTIQIGDTFTQGENFKFTGIPNFAP
                     ELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLINNDLIVGAVGVLQFDVVVSRL
                     KTEYGVEAIYETVNVATARWVEGKDAKKFEEFKRKNEANLALDGGDNLTYIAPTMVNL
                     NLAQERYPDVQFFKTREH"
     gene            12165..13739
                     /locus_tag="PXB09_000649"
     CDS             12165..13739
                     /locus_tag="PXB09_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5232794.1"
                     /translation="MKKWLIPLTVAAFCVSACDDKNSTQATAEKPQVENTQSQKNAEI
                     LPLATVVAPWEINSLDPNQSGVIFQRMNLAETLVEADLNGNLIPALATDWRSNEEGTI
                     WRFTLREGVKFHNDQVLTAQAVVNSLNIAKSKPGVLAKAFIKEIRAVDNKVEIELTKA
                     FVPFPPFLTHYTALILAPESYNEKGEVTQIIGTGAFKPTKIEAPQKLEAVQFEGYWGK
                     KPQVQQANYLASSRSETRMLMAQSEPSSLVFNLDTASVARLKADPNLQLVSGSIARTI
                     QLKMDVAKPFFNDLAIRQALSQAINRKAIAEQVLKIENGAADQILPKAFADWRVDTAE
                     QVVDIAKIKQNLTASGYTFDEQGRLTKDGKPFSFTMRTFSDRPELPVIATILQAQWKQ
                     IGVEVNVSVGNFSEIPAGHQDGSLEMALYALNYGKTLDPYGVIASDFANGGSDWGVMN
                     WQNTEVDNAVKSLETERDPQKAKALKQTVSKIIYNDLPIIPVVYYQQNVVAHKEVKNV
                     TLDPFERRFFLELLSK"
     gene            13959..14891
                     /locus_tag="PXB09_000650"
     CDS             13959..14891
                     /locus_tag="PXB09_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232795.1"
                     /translation="MHKILFRRLIQILLVIWSVGTLTFILTRQLSGDMAYRIAASRYG
                     YDQADSAAAEAVRAELGLDQPWWQSYFSWLSDLAQFNLGKSLVTGDPVWSEIQHQFGH
                     TLSLAIVALILAILIGPPLGLLAARKPNGFFDRLTLVFSTLFRSVPAFIIAIGLITLF
                     SAQLKWLPAGGYGCWQHFILPALTLAIGLSTVSVRVTRSAMVQVKGSEFYQFSQLKGL
                     SRWHTFLRHGLPNIAVPVIAYHAVQLVYLIEGVVVVESLFAWPGSGHALVHAIIARDV
                     PMIQGTTLVMGGLFVVLNTIADLLSAWIDPRIKR"
     gene            14901..15683
                     /locus_tag="PXB09_000651"
     CDS             14901..15683
                     /locus_tag="PXB09_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232796.1"
                     /translation="MKISISQYLGGTILLAMLGFAFLQPYFYPMDIGFQDLTNILSNP
                     NEIAWFGTDHLGRDMLARLASAIRLSFGLSLFSVICALIAGLITGIMAGFFGGWIDRI
                     FSFICDLVMALPGLLLVLLFAALSPGSFWTLYLGISLVMWVEFFRVIRSISSTMANSS
                     EIQASRLMGMGWFYSFKRHLLPRLLPMIATLSAFSLGNAILALATLGFVSVGLRPPTA
                     ELGLMMTELFPYYYEAPLIFLQPVVAVFLMVLSLQLLSRKIK"
     gene            15772..17184
                     /locus_tag="PXB09_000652"
     CDS             15772..17184
                     /locus_tag="PXB09_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232797.1"
                     /translation="MKLLDIQNLSVETENRLQLVEPISLQLKAGKNITILGETGSGKS
                     LLIQAIMGALPDGLIASGEISVKNCKISTESDRLQTLWGKTLVMLPQEPRRSLNPIMA
                     IGKQLWESFHYVAGKPSSQAKTESKAYLAKLGLGESVENYPHQLSGGMAQRASFAIAT
                     AAGGKILLADEPTKGLDPISKGKVIELLKSAYQNGGGLLTITHDIEVAEQLGGTILVM
                     KKGELLEQGEAKALLNNPQHPYTKALISADPKHWQPLQDLQNLSQKQPLVSVKNLSIA
                     RGKKTLFSNLSFDLHKGEVLGIVGHSGIGKSSLADVLCGLLKPKSGEVVWHSHSHKKH
                     QVLKLYQDPPEAFAPNVSLKTLLDDVINKHQLDRLPIPSLLQQLSLNPEILQRNAENV
                     SGGELQRVAILRALLLEPVLLFADEVTSRLDPITQQETIELLINQCRARNCSLILVSH
                     DPYLIEKSCDKVINLEEYVG"
     gene            complement(17271..18014)
                     /gene="rlmB"
                     /locus_tag="PXB09_000653"
     CDS             complement(17271..18014)
                     /gene="rlmB"
                     /locus_tag="PXB09_000653"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDL5232798.1"
                     /translation="MSEQIYGIHAVKAFLDNAPERLIEVLVLKGREDKRLMPLLNELQ
                     RLGVAIQQVNRQTLDNKSQGEVHQGIIARVVPQKELNEHDLEAILSQKKNPLLLILDG
                     VTDPHNLGACLRTADAAGVDAVIVPKDKSAQLTPTARKVACGAAEVMPLIRVTNLART
                     MRDLQERHNVWIVGTAGEAESGIYEAKLTGSIALVMGAEGDGMRRLTREHCDQLISIP
                     MAGSVSSLNVSVATGVCLFEIVRQKLAGQ"
     gene            complement(18069..19436)
                     /gene="pssA"
                     /locus_tag="PXB09_000654"
     CDS             complement(18069..19436)
                     /gene="pssA"
                     /locus_tag="PXB09_000654"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDL5232799.1"
                     /translation="MLILNKQRKAEYLLKSLPYLPQVAEQVQFLASSKAFKQQILQLI
                     QTAKKRIYITALYFEKDEAGQEVLAALYQAKRNNPELEINILVDWHRAQRGRIGEAEN
                     LSNADWYAKVKYEQGLPAGQEIAFYGVSINGREVFGVLHLKGFVFDDTILYSGASINN
                     VYLHQFERYRYDRYHVIENKVLADSWVTFIQQHLLTNEAVKRLDTENRPKTAEIRAQI
                     KHFRKQLSREAYLFNGVAENGRLAVSPLVGLGRRKNQLNKVIEALFYQTEQKLTICTP
                     YFNFPHSLRTRIEWLLANGKSVEIIVGDKTANDFYTKPDEKFTMASALPYLYEKNLRA
                     FAKRLDGYVQNKQLTIRLWKDGENSYHLKGVWVDNRYILLTGNNLNPRAWRLDAENAI
                     LISDPQHQLSEKAETELNQICQHTQILTHYSDLEVLTDYPENVRKLLKKFGRVKLDKI
                     VKMLL"
     gene            complement(19506..21053)
                     /locus_tag="PXB09_000655"
     CDS             complement(19506..21053)
                     /locus_tag="PXB09_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HDL5232800.1"
                     /translation="MMKIIAFLFIFLSVFSHTALANSMAEQCVALKSNSPEKTAIYKA
                     EWVEKSAELPAYCLVQGEIGKRVEVDNVPYGIQFELRLPEQWNEKFLFQGAGGVGGVI
                     FPAIGKLYPHGASGANGLNRGYAVVSNDSGHATRDLVFTADPEARSNYAYASIGKVTT
                     VAKQLIAEFYRKPSKHNYIMGCSNGGREAMMAAMRYPQEFDGVIAGSPGFRVSRSVLA
                     EVWDNRALLAVAPKNGDGDKILSQALTQQDLDVIANGVLTRCDKLDGLADGLINAWEQ
                     CDFQPEMVAKQLGQKKVALIKTIFEGAKNSRGELIYSPWAYDSGINAKGWRDWKLGDS
                     QTAQPNSISFKMGLKSLTHYYLAPRVPSRDPLSVDLDQASEQVKAVGSIHDTDQVDLS
                     AFKQNGGKMLIYQGVSDPIFSAVDLKNWYQSLQQAVENPQHFAKLFFVSAMNHCGRGA
                     TVNDFDMLTALENWVEKGLEPESIAAKAGELYPNKAKQIPLCAYPKVAIYQTGEDPNR
                     LTSYQCR"
     gene            complement(21178..23994)
                     /gene="ileS"
                     /locus_tag="PXB09_000656"
     CDS             complement(21178..23994)
                     /gene="ileS"
                     /locus_tag="PXB09_000656"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDL5232801.1"
                     /translation="MTIDYKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKIRT
                     ASKGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLP
                     IELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNF
                     NTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAV
                     DVNAVEEKFNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDERVLLA
                     VDLVEDVAKAAGVESAEILATTKGENLELLRFNHPFYDYSVPFIFGDHVTTDGGTGLV
                     HTAPDHGADDFVVARKYNIEMAGLISNDGKFKADTPFFAGLGVFESNDKVVEKLQEVG
                     ALLKLSRIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPSWGE
                     ARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLELIEEVAKRVEEKGIQA
                     WWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTYASVVEQRPEFNGNSADMYLEGSDQ
                     HRGWFMSSLMLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGAD
                     ILRLWVASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEM
                     IALDRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTK
                     ADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWGYLPQVEGRSEFVFTEEFYTGL
                     FGLTEQDKLDDAYWQQILKVRAEVNRVLEQARKDKVIGAGLEAKVTVFANDEIRPLLE
                     QLGNELRFVLITSQAIVKPLAEADIAEGELAGLAVKVENADGEKCPRCWHYATDIGSH
                     SGHEEVCGRCVENVAGEGEKRLFA"
     gene            complement(24097..25059)
                     /gene="ribF"
                     /locus_tag="PXB09_000657"
     CDS             complement(24097..25059)
                     /gene="ribF"
                     /locus_tag="PXB09_000657"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDL5232802.1"
                     /translation="MQLIRGFHNLDKHIALNQGCVLSIGNFDGVHLGHQNILARLCDR
                     ALDLGLPSVVMLFEPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCV
                     RFSEKFAQISADDFISDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAV
                     EESHTHSLNEERISSSLVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPT
                     ANIMLNRLVTPIQGVFAVKVKTKQGSFNGIANVGNRPTINGTKPLLEVHIFDFNASIY
                     GEAIEVIFLKKLRNEIKFPDFEALKAQIEKDRLQAVEFFKEFAR"
BASE COUNT         7174 a         5759 c         5031 g         7209 t
ORIGIN      
        1 ggctatttat tctagaagga ctctaaacgt gttaaagaaa aattatctca ctgtatcaat
       61 tctccttgcc attagtggag taggctacgc taatgaaatc tctttagaga ctattactgt
      121 tgatggaaat acgccttcaa ccaaagggaa attactaggt ggtgaactaa atagcaatga
      181 atctgttgtt gatgaaaaaa attaaaacaa ggtagtatta cattaggtaa cgctttatct
      241 ggtgaattag gcattcattc aagccagttc ggaggcggtg caagtacccc aattattcgt
      301 gggcaagaga gtaaacgtgc aaaaatctta caaaataatg gcgaaaactt agatatgtcg
      361 ggaatgtctc ctgatcatgc agtaaccgta gatgcgctac ttgctaaacg tattgaaatt
      421 ttacgtggtc caactacttt actttacagt gcaggtaata cggcaggtgt aattaatgtg
      481 gtagacaata aaattccaac cgctattccc gaaaaaggct atgaggggca atttggtgtg
      541 cgttttggct cagccagtaa agagcgttta acctatgcag gctcaacctt tgcccttgga
      601 aatcatttag ccttgcgggt acagggaatg tataacaaag cttccgaata ctatgctcca
      661 cactttacga ttgaaggcaa accttaccac cgcgtaccag atagcgatgt acaatcacaa
      721 accggcacag taagcctttc ttggattgga gagcgaggac atcttggtat tgcttacact
      781 gatcgccgtg ataaatatgg attaattggt cacacacaca aatacgatca ctatactatt
      841 agtattattc gccaagccgt tatgtttgca aaaggttatt tacgttttta tccgcacctt
      901 gcagaagaag gagatattga ctataacaac cctggtatcc gtttactgca tactcatatt
      961 ccgggaggct cacattatgg acaagatact cacgagcacg gcaaaccttg gattgatatg
     1021 cactccaagc ggtatgatat tgatggaagt ttgcaaaatc cacttcctgg ttttgaagaa
     1081 gccaaaatat cagctaacta tgtagattac tatcatgatg aaaaagatgg aaaaagagtt
     1141 gaaaattact tcaagaacaa aggaaaaaat ctacgtttcg aattggttca caaagagtgg
     1201 aaagggctaa aaggagctat tggtgtgcaa tataccaacc aatctacctc agcacttgca
     1261 cttgaagctt cacgagctgc aaaagtattt aataaacagc ctttactcaa taatccaaaa
     1321 acaaaattat ggagtctctt tgcgattgaa cgccttaatt taggtgactt tacctttgag
     1381 ttaagtgggc gggcagaacg tcaaaaaata gcaatggatt atgatgtgaa attaattgat
     1441 cgctggctag gctttaatac acctatgcca aacttggacc cacataaaga caaaggttat
     1501 tcttatagct ttgcaactca ttggtatttc gcaccaaacc ataagttaac attaaatgct
     1561 gcacatcaag aacgtttacc taatgctcag gaactctatg ctcatggtaa acacattgct
     1621 ttaaatgcat ttgaggctgg caataaaaat ctaaaaaaag agcgttctaa ccaaattgag
     1681 ctatcattag cttatgttgg cgacaaatgg gattataaat taaatctcta ccacacccgc
     1741 tatggcaact atatttaccc attaactctt aatgataatc gtggacctaa atcttttacc
     1801 gatgaatata acttgaaagt gaatagatat tatcaaggcg aagctcgttt tagtggggca
     1861 gaaggcgaaa ttggttatct atttacacca aattatcgct tagccgtatt cggagactat
     1921 gtccgtggaa agttagtcaa cttacctaat attgcaatga gttacaacat ttggacaggt
     1981 gaagttgaca aatgggcttc tcagccagac atttctgcac ctcgtatacc accactacgt
     2041 ttaggagcaa gatttaatgc tgacttcaac ctaaactggt ctggaatgtt agaatattac
     2101 cgagtatttg ctcagaaaaa agtctcgaaa tacgaacaag ttacccctgg ccatcatcaa
     2161 gtaaaccttg gcgtaaccta tagtaatcat tttaatcaaa cagaatacca agtattcctt
     2221 aaagtggata acttgcttaa tcagaaaatg taccaacatg cctcatatct accacatatt
     2281 ccacaaatgg gtagaaatgc aatgcttgga atgaatatca gtttttaatt tgtaaatctc
     2341 tacaaaaata taaccgcttg taaatttcta tctacaagcg gttactttca gtggattttt
     2401 tgcaattaga gatcgtcaat taccaagtaa attttattta ccgggccgtg aacgccaact
     2461 actttaatca actcaatatc cgcagtcgcc gatgggcctg agatgatatt cacacaagat
     2521 ggcattcttt cacctcgttg ggctttttcg tgcagaattt gtgcaagctg tgccacacga
     2581 ggtaacactg tacttttgcg taacacaacc accgattttt cgggcaataa gctcactgaa
     2641 cgcccaaatt ctttatcgga aaacagtaca ataccgccag actctgccaa gccatattca
     2701 ccgtaaacca caccgatatt agcagttctg gctttttcaa agttggtttc agcttggttg
     2761 aaatcccaca catagctgtc ttcgtatttt gcttgaatgg ctgcggtaat cccaagatcc
     2821 tttaaacgtt gatcgttatt cacgatcaca ctcgccccgc catatttttc acaaatatca
     2881 ataatggctt gtggtaaatc cgcctctttt gcctctacta catctgccat catcactcgg
     2941 gcaaaatcga taaactcttg gcaaagttgt ggttgagggc gatcggttaa acgggtaatc
     3001 gcgtggttgt tttccaacac aggaattggc tcaggcacat tttggcgtgg tctgcccata
     3061 cgctgtgcca atttatttaa gaaattttca cgattttgta aatccatttt cttatcctct
     3121 gttattaaac cattcacgga aactttcgcc ttcggcagtc ggtaaatcac gggctttcgt
     3181 ccattcacct aacgccccaa aattcaccgg tgctttgccg tttttaatca atttgcttgc
     3241 cactttcgcc cccactttta cgccgacttt ccaaagggtt gggtgtgagt tagcgaagtt
     3301 aaagccaaaa atagacaagc gttctgccat tggcgttaag ccggcatccg caattttctc
     3361 acggtgtttt aagataagct gtgccagtgg aattttcact ggacaaacac tgttacaagc
     3421 ggtacaaagt gagcaagcat acggcaattc tttaaactct tcgtagccac cgagcaatgg
     3481 cgaaataact gaaccaatcg ggcccggata gattgaacca tagccgtgac cgccaatttg
     3541 gcgatacgcc gggcaagtgt tcaaacatgc accacagcgg atacaacgca acacttcttg
     3601 gaattcgctt tctaagattt tagaacgacc gttatcgaca atgaccaagt ggaactcttc
     3661 cggaccatcg gtttcgcctt caagtctagg acctgtcagc caagtgttgt aagcggtgag
     3721 ttttgcccct accgcactgc gagccagcat ggtaattaat acatcaacct ctttaaaggt
     3781 tggggcgata cgttccatac ccattactgc aatatgcgtt ttcggcacag ttgttgccat
     3841 acgcagatta ccttcgttgg tcactaaaca aaccgagccg gtttccggca ccgcaaagtt
     3901 acagcctgaa ataccgatgt ctgcctctaa gaaatcttca cggatttttt ggcggacgaa
     3961 tgcagtcatc tcttcaggtg tttccgaacc ttgataacct agcacatcgt gcatttcttg
     4021 gcggattctg tggcgatctt tgtggattgc aggtacaaca atatgagaag gtttatcgcc
     4081 cacaatttgc aataaatatt cgcccaaatc ggtttcaacc actttaatgc cttctgcttc
     4141 taaaacgtgg ttcatcccaa tctcttcggt taccatcgac ttcgatttta cgattttctt
     4201 cgcattttta gctttcgcca cgtttttgat gtaatcagtg gcttcttcgg cggtttcggc
     4261 aaagaaaacg tgtccgccgt tttgggtgac tttttcgctt aattggtaga gataagcgtc
     4321 taaattggct aaaacgtggt tacgaattgc tttcgcatca tcacgccact cttcccagtt
     4381 gcccagctca tccaccatac gctgacggtt tgcaccgatt gtttcctgag ccttaactaa
     4441 ggctttacgc acaatctcgt tattaacttg ctgctcaaca cgttgtttaa acggcagggt
     4501 gttagtttgt aaataagaca tcttattttc ctccctgcat taacacttcg gcaatgtgca
     4561 tcactttgat tggcttacct tcacggctta aacgaccgcc aatgttcatc aagcagctta
     4621 catctgcccc gattaaataa tccggctcat cggtatctac atttgcgact ttctctttta
     4681 ccatctcgcc ggaaatttct gccattttga ccgagaatgt gccaccaaaa ccacagcaag
     4741 tttcttggtt tttgattggt aataactcta accctttaac gtgctgtaat aaagcaatag
     4801 gctcatcttt aatccccagc ttacggaata agctgcaaga cgggtgataa actgctttgc
     4861 ccggtaaata agccccaaca tctttcacgc ccagtttgtt cacaataaaa tcggttaaat
     4921 catagaaacg atcagccact ttcttcgcac gttctgccca ttctttttcg ccaaagcgtt
     4981 caaaatgatc cggataggtt ttgatcgcat atacacaaga acctgccggg gcgacaatcg
     5041 ggtaatcatt agcttcaaag gtttcaacca agtttttcat acctgctaaa gcttgcttag
     5101 tgtaaccgct gttgatcgca ggttgtccac agcaaccttg tttttctaag aaagtgattt
     5161 tacaacctaa tttttccaat aaaagcacag tattttttgc aacccctgct ttcattacat
     5221 ctgcaatgca ggttacgtaa aaattaacgt tcataaagaa ctcccacagt aaatataaat
     5281 aagaattaaa ctcaaaaaat gccgttctaa gacggcgaaa ggaagaggtg gatttgcaaa
     5341 aaatttgcta aatctcaccg cttcctttct aaatcaagta agctgattat taactcatta
     5401 taggttatag aacataggta ctataaacaa tgccgaaatc gcagcaataa cgccatacac
     5461 gaacattggc acggctgttt tcttaataat attgccttct tgtttctcaa tgccggtaac
     5521 agaacacaca gccacgatgt tgttaataca caccatattc cccattgcac caccaactga
     5581 ttgcaatgca agaattaagg taacagataa cccgacttgc tgtgccgttg catattgtac
     5641 tgttccgaag gttaagttag ataccgtatt tgaccctgag aagaacgcac caattgcacc
     5701 taagaacgag gcaaataatg tccaagattg accggtaaat tctgcgaagt ttttaccaat
     5761 gatctgaacc attgagtcta caccaccaat taacattaat tttaccatca caatggcacc
     5821 taaaagtgct aagaatggtt ttttcacttg tttaaatgaa gtgccaaaaa tctcttgagt
     5881 atttttacct gataccgaga aaatcggtaa gcaaattaat acggtcacaa caaatggaat
     5941 caacgcagga acatacagta atttatagct agttgctaca ttcgtaccta aaatattttt
     6001 cagtgcaaaa attaagcctt ggctaatttc aaagttagcg aaaccaagcg aactgacaat
     6061 ccaagctgtt gcatcattta gcattgcttt taatggaagt tgctgaatac gggtgattac
     6121 caaaatgaag atcagtaacc ctgttggtaa taatgctttt gccacttcac caaaggtcgc
     6181 tttatcgccg tcaaggtggt tctcgctttt cgctaaacca atacccatat ttgctaccca
     6241 gactgacacc aataaaccaa tcgccccggc aactaatgat gggaattcgt agttaaattg
     6301 agcaataatg aagtaaggaa tgacacaggc aaaaatgctg atataaataa acacgatatt
     6361 ttgacgaatt tctttccagc tcacaattaa acgcaatgcc ataactggaa taataaacgc
     6421 agcaatagag tggatcagtg cagtaataga accaatttca agcacttgtg catcggttag
     6481 taaaccatct tttaataatg gtcccatacc aaaccaagtt ggtgtgccaa ccgcaccaaa
     6541 tgacaccggc acagagttca ttactaaggc taacattgcc acttgtaacg gtttaaagcc
     6601 taaaccaacc agaattggag ctgcaattgc cgccggcgta ccgaaacctg atgcgccttc
     6661 aatcataaat gcaaatgccc aaccgataat catcaactgt gccaccggat tcgggttaat
     6721 tgtccctaac catttacgca tagtgttggt tgcacctgaa acttcagaga aacggttaaa
     6781 taaaatcgcc ccgaaaataa cggtaattgg ggttaataca tcacctaaac cggcaataat
     6841 attggcaaag attaacgtgg tatcattacc aaaataggta agctgaagca caaaaattaa
     6901 taacgccgta agtggtaaag ccacataaga cggtaacgcg ttacgtttta ccattaaata
     6961 aatgagcaaa acaattggaa atacgctcag gaatagagcc atactgcacc tctttatatg
     7021 attataaaat gacctaactg gtcggatagg tgcgaattgt actcttaaaa aaaactaatg
     7081 taactaggtt gttacaattt tgtgatctag ctcgcatttt taatgattgt atggttaaaa
     7141 aagagccata tttattttca tttaatactt aatagttagc cctatttaag acatttttac
     7201 cgaatcgagc aatatgcaat taattaacaa aaaaaggccg cttgtagatc acagatcaac
     7261 aagcggtctt ttttaggcaa aaatttgcaa attaaacatt gaaacggaag tgcattacat
     7321 cgccgtcttg aacaatataa tctttacctt ccaaacgcca tttacccgct tcttttgcac
     7381 cggcttcacc tttattgtct atgaagtctt ggtaagcaat tacttccgca cgaataaagc
     7441 ctttctcaaa gtcagtgtga atcacggctg ctgcttttgg agcggttgca cctaccgaaa
     7501 ccgtccacgc acgcacttct tttacccctg cggtaaagta ggtttgtaag ttaagtaaac
     7561 ggtagcctgc acgaataaca cggtttaagc ccggctcttc aatgcctaaa tcttgtagaa
     7621 attccacttt ttcttcgtca tcaagctcgg caatttccga ttcaatcgct gcacacaccg
     7681 gtacaaccac cgccccttct ttttcggcaa tttcacgcac acggtcaaga taagggttat
     7741 tttcaaaacc gtcttcgttc acgttggcaa tatacattgt cggttttaaa gttaagaagt
     7801 tgtagccctt aatagcgtgc agttcatcct tatctaaatc taccgaacga atcataccgg
     7861 cattttcaag cacaggtagg attttttcca taatcgataa ttcaaatttt gcgtctttat
     7921 cgccaccttt cgcacgtttt tgtaaacgct gaatggcacg ctcgcaactg tctaaatcgg
     7981 caagtgccaa ttcggtattg atgatttcaa tatcatcagc tgggtcaatt ttccccgcaa
     8041 cgtgaacgat gtcatcattt tcaaaacaac gcacaacgtg gccaatcgca tcagtttcac
     8101 gaatattggc taagaattta ttacctaaac cttcgccttt gcttgcacct gccactaagc
     8161 cggcaatatc cacaaattcc attgtagttg gtaacactcg ctcaggtttc acaatttccg
     8221 ccaacgcatc taagcgaggg tcaggcattg gtaccacacc ggtatttggc tcaatcgtac
     8281 agaacggata gtttgctgcc tcaatacctg ctttagttaa tgcattgaaa agggtcgatt
     8341 taccgacatt tggtaaaccc acaataccac atttaaatcc cattttttgt tccttagaat
     8401 tcccctctcc ccttgcggga gagggataaa tttgagcttc gttcagaagc gaaaatgagg
     8461 gagagggcga aattgcaata atttcctcaa atatgaccgc tcccctctct ctgaaaaata
     8521 cttctgaacg aagtattttt cggtctctct cccacaaggg agagagtttt aatttgcttt
     8581 aaaactattt aaacggttag ttgccttaac cattccgtct ttaaataaaa cttctacgca
     8641 acgtgcggct tcatcaaccg cactattcag taatgtctga tcgcttggtg aaggcttgcc
     8701 cagcacataa ttcgccacta agtctttatg ccccgggtgt ccaataccaa ttcgcacacg
     8761 gtaaaactct ttattattgc caagggcggc aataatatct ttcaagccgt tatgaccacc
     8821 gtgtccgccg ccttttttca atttcaccga accgggtggt aaatccaatt catcgtgagc
     8881 gaccaaaatt tcttccggtt taatccgata aaaattggct aacgctccca ctgctttacc
     8941 acttaaattc ataaaagtag tcggcactaa taaacggact tcgccttgag cggtattaat
     9001 ttttgctact ttgccaaaat atttcggctc ttcttttagg ctaacgttat atattcgggc
     9061 aagttcgtta atcagccact cgcctgcatt atggcgggtt tcttcatatt ttacccccgg
     9121 gttcgccagc ccgacaatta atttaatttc tgacacaatc ttgtctcaat tcatttaatt
     9181 taaaaggcag tattttagag aaaaaccgct attttctcaa ggcaaccatt aatcatattg
     9241 tctatacgga tttggtacgc attgatactt cgctaacatc gattcagtga aatcggtgcg
     9301 tgaagcagcg ttatcattgt ttaaactaac cacaccaatt cgcttgcctc tgcaatcccc
     9361 tttagcaata aaggcaagat tataacccgc ctcacgggta taacctgtct tactcactaa
     9421 tgcctgatag gattgggaac gaaccatact gttggtgttt ttcatagaga aataacgacc
     9481 acctgcataa acactcacta atggcgaatt agacaattgc tgaatttcag gcttacttgc
     9541 cgcatagcct gccaatttag caagatcaac caccgttgaa acattatccg aagataagcc
     9601 tgagctatca ccaaagtagg tttgagtcat accgatttca cgggctttgc tgttcattcg
     9661 agccaaaaat tgggctttat tcaaatgtgt tgcgtgggca agggcgtgag cggcatagtt
     9721 atcggagcga actagcatcg cttttaacaa ttcactacag gcaatgttaa gatttttcgg
     9781 caatgggctg gtcgtgcctt ttaagaaatc agcatctgac ggcaaaattt gggtttggca
     9841 actcgcccca tagcggtttt cttctaagaa aacgactgct gtcattaatt ttgtgaccga
     9901 agcaatcggg cgaactaaat tgaaattctt accttccaaa aatttctttt ggtttaagtc
     9961 aaacaccaca taagcggaat tttcggttgg aatataagca gcggttgctt taatccgtgg
    10021 tgtgcttttc ctttttgccg gctgggagga acaggcgctt aacaccagag ccgcaatcat
    10081 aacaggaata aattttttca tcataataga ttcatcgata ataaagtcaa agctggttat
    10141 tctaccctgt ttccaaaatt gtgccaaagc aagcggtcga tttttacaaa atttttgcaa
    10201 atctagccga ttttgcaaaa tttccgccaa atttaaccgc ttgccctctc gcctcaaatc
    10261 agcgaaaata acgcttaatt ttttggcgga ctttccgccc tttttatttt aattggttga
    10321 gaaaaatgtc atacccacaa gaagttaata aacgtcgcac ctttgcgatt atttcccacc
    10381 ccgatgcggg taaaaccacc attaccgaaa aagtattgct ctacggaaat gcaatccaaa
    10441 ctgccggctc ggtaaaaggc aaaggctcgg cacaacacgc taaatccgac tggatggaga
    10501 tggaaaaaca acgtggaatt tcgattacca cctccgtgat gcagttcccg tacaatgatt
    10561 gcttggtaaa cttactcgat acaccggggc acgaagactt ctcggaagat acttatcgta
    10621 ctttgactgc ggtagatagc tgcttaatgg ttatcgactc ggcaaaaggg gttgaggaac
    10681 gcaccattaa attaatggaa gtgacccgct tgcgtgatac gccaatccta acctttatga
    10741 acaagctaga ccgtgatatt cgtgacccga tggagctgtt agatgaagtg gaaagcgtgc
    10801 tgaaaatcaa atgtgcgccg atcacttggc cgattggttg cggaaaattg tttaaagggg
    10861 tatatcacct ttacaaggac gaaacctact tataccaaac cggacaaggt cataccattc
    10921 aagaagtacg agtggttaaa ggcttaaata atccggaact ggatcaagcc gttggcgatg
    10981 atttagccca gcagttgcgt gatgaattag agctggtaca aggcgcttcg cacgaattcg
    11041 atcacaccga atttatcaaa ggcgagctga caccggtttt ctttggcact gcactgggta
    11101 acttcggggt caatcatttc cttgacggtt taaccgaatg ggcaccggca ccacaagccc
    11161 gtcaatcgga cgaacgtgaa gtttcaccaa gcgaggaaaa attcagcggt ttcgtattta
    11221 aaattcaagc gaatatggat ccgaaacacc gagatcgagt tgcttttatg cgtgtcgttt
    11281 caggtaaata tgaaaaagga atgaagctta aacacgtccg tatcggcaaa gatgtggtga
    11341 tctccgatgc cttaaccttt atggcgggcg accgttcaca agccgaagaa gcctacgccg
    11401 gcgatattat cggcttgcac aatcacggca cgatccaaat tggtgatact ttcacccaag
    11461 gcgaaaattt caaattcacc ggtattccga acttcgcccc tgagctgttc cgccgaatcc
    11521 gcctgcgtga tccgctcaaa cagaaacaac tgctcaaagg cttggtacaa ctttccgaag
    11581 agggtgcggt gcaagtattc cgtccgttaa tcaacaacga tttgatcgtg ggagcggttg
    11641 gggtgctaca gtttgatgtg gtggtttcac ggctgaaaac cgaatacggt gtagaggcaa
    11701 tttatgaaac cgtaaacgtt gccacagccc gttgggtcga aggcaaagat gccaaaaaat
    11761 ttgaagagtt caaacgcaaa aacgaggcaa accttgccct agacggcgga gacaacctca
    11821 cctacattgc tccgacaatg gtgaacttaa acctcgccca agaacgttac cctgacgtac
    11881 agttctttaa aacgagagag cactaaaacc aataggggcg aaaaatcttt cgcccctaca
    11941 aataaagcac aagcggtcaa ttttttttcc gaattttaca atactaggca ttctgttcct
    12001 caaatagcct aaatattccc ctatcaacaa tccttatctt gagattattc tgcctattaa
    12061 ttaaccactc aaaaataccc tcgcagaaaa ctctactttt tttatggaaa tatgctaaag
    12121 ttcgccaata ttcatagccc tgattttttt atggagaaaa taaaatgaaa aaatggttga
    12181 ttccattaac tgtcgcagcg ttctgtgttt ctgcttgcga tgataagaac agcactcaag
    12241 caaccgcaga aaaaccgcaa gtagagaata ctcaatcgca aaaaaatgcg gaaatattac
    12301 cgcttgcaac cgtggttgcc ccatgggaaa tcaatagcct tgacccgaat caatcaggcg
    12361 taattttcca gcgtatgaac ttagcggaaa cattggtcga agccgatctt aacgggaatt
    12421 taattccggc attggccact gactggcgca gtaacgaaga gggaacaatc tggcgtttta
    12481 ccttgcgtga aggggtaaaa ttccataacg atcaagtact taccgcacaa gcagtggtaa
    12541 atagtttgaa tatcgcaaaa agcaaaccgg gtgtgttagc aaaagccttt atcaaggaaa
    12601 ttcgagcggt agataacaaa gtggaaattg agctaactaa agcttttgtg ccgtttcctc
    12661 cctttttaac acactacacc gccttaattt tggcacctga aagctataat gaaaaaggcg
    12721 aagtgaccca aattatcggt acaggtgcgt ttaaacccac aaaaattgaa gctccgcaga
    12781 aattggaagc ggtgcaattt gagggctatt ggggcaaaaa accgcaagtt cagcaagcca
    12841 attatttagc cagcagccgt agcgaaaccc gtatgttaat ggcacaaagc gagccgtcat
    12901 cactggtatt taatttagat accgccagtg tagcaaggct gaaagccgat cctaacctgc
    12961 aattagtcag cggatctatt gcccgtacta ttcagttgaa aatggacgtg gcaaagccgt
    13021 tttttaacga cttagcgatt cgccaagcct tatcgcaagc gattaatcgc aaggcgattg
    13081 ctgagcaggt cttaaaaatt gagaacggag ctgccgatca aattttaccg aaagcctttg
    13141 ccgactggcg tgttgatacc gcagaacaag tggtcgatat tgcaaaaatt aaacaaaatc
    13201 tgaccgcttc cggctatacc tttgatgaac aaggtcgctt aaccaaagac ggcaaaccgt
    13261 ttagctttac catgcgcacc ttctcagatc gtcctgaatt accggtgatt gctactatct
    13321 tacaagctca atggaaacaa attggcgtgg aagtgaatgt ttcggtgggt aatttcagcg
    13381 aaattccggc ggggcatcaa gacggcagtt tagaaatggc tctttatgcc ttaaattatg
    13441 gcaaaacctt agatccatat ggcgtaattg cctccgactt cgccaatggt ggcagtgatt
    13501 ggggggtaat gaattggcaa aatactgagg tagacaatgc agtcaaatcg ctcgaaaccg
    13561 agcgtgaccc gcaaaaagcg aaagcattaa agcaaacggt tagcaaaatt atttacaatg
    13621 atttgccaat cattccggtg gtttattacc aacaaaatgt ggtggcacat aaagaagtaa
    13681 aaaatgtgac gctagatcca tttgaaagac gcttcttttt ggagttatta agtaagtagt
    13741 ttaattcaaa atactcctcg ctttagaaaa gggaaggtag gatttttcag tagtaatttg
    13801 cgctcttagg tgaataaata gtgacagaat tatcgttttt tctcattttt cacctatttt
    13861 ctccgcttat ttcttctgcc aaatcttccc ttcccctctt tgctaaagag ggggatcaga
    13921 acgcataaaa tcatcttttt aataaatgaa ataatacaat gcacaaaatt ctcttccgcc
    13981 gtcttatcca aattctactg gtgatttggt cggttggcac actcacattt atcctcaccc
    14041 gccaactttc gggtgatatg gcataccgca ttgctgccag ccgctatggt tatgatcaag
    14101 cagatagtgc tgctgctgag gctgtgcgtg ccgagctggg attagaccaa ccttggtggc
    14161 aaagctactt cagctggcta agtgacttgg ctcaatttaa tttaggcaaa tcattggtga
    14221 ccggtgatcc ggtctggtct gaaattcagc accaattcgg gcatacctta agccttgcga
    14281 ttgtggcact tatcttagca atccttatcg ggcctccgct cggtttgtta gccgcccgta
    14341 agccaaacgg cttttttgac cgcttgacac tggtattcag taccctgttt cgctccgtgc
    14401 cggcatttat tattgcgatt ggcttgatta cgctgttttc cgctcaacta aaatggctac
    14461 ctgccggcgg atacggctgt tggcaacatt ttatcttgcc tgccttaacg cttgcgattg
    14521 gcttgagtac ggtttcggta cgagtcaccc gttctgcaat ggttcaggta aaaggctcag
    14581 aattttacca attttcacaa ttaaaaggct taagccgttg gcataccttt ttacgtcacg
    14641 gtttgccgaa tattgccgtg ccggtcattg cctaccacgc agtacaatta gtttatttaa
    14701 ttgaaggcgt tgtggtggtc gaaagcctat ttgcttggcc cggcagcgga cacgcactgg
    14761 ttcacgccat cattgcccgt gatgtgccga tgattcaagg tacaacgctc gtgatgggcg
    14821 gattgtttgt tgtattaaac accattgccg atctattaag tgcttggatt gacccacgaa
    14881 ttaagcgata ggacatcaag atgaaaattt caatttcaca atatttaggc ggcactattc
    14941 tccttgcaat gttgggattt gcctttttac agccttattt ttacccgatg gatattggct
    15001 ttcaagattt aaccaatatc ctttccaatc caaatgaaat cgcttggttc ggcaccgatc
    15061 atctcgggcg ggatatgctt gcccgtcttg cctctgctat tcgtctttcg tttggcttat
    15121 cactgtttag cgtgatttgt gccttaattg caggcttaat taccggcatt atggcaggct
    15181 ttttcggtgg ctggattgac cgcattttca gctttatttg tgatctagtg atggcactcc
    15241 ccggcttact tttagtattg ctctttgccg ccctttctcc cggctcattt tggacgctct
    15301 atttagggat ttcattggta atgtgggtgg aatttttccg tgtgatccgc tctatcagtt
    15361 caacaatggc aaacagctcg gaaattcaag cctcacgcct aatgggaatg ggctggtttt
    15421 atagcttcaa acgccactta ttgccccgtt tattaccgat gattgccact ttatcggcat
    15481 tctcgctcgg caatgcgatt ttagctctcg ccacacttgg ctttgtcagc gtagggcttc
    15541 gcccgcctac agcagaatta ggcttgatga tgaccgaact attcccttac tactacgaag
    15601 caccgctgat atttttgcaa ccagtggttg ccgttttctt aatggtactc agcttacaat
    15661 tattgtctag aaaaattaaa taatgcgtag gggcaggtcc tgtgcctgcc caaaattctt
    15721 attatattta tgggcgggca cagggcccgc ccctacagta ataaaatgaa gatgaaatta
    15781 ctcgatatcc aaaacctatc tgttgaaacc gaaaacagat tacagctggt cgaaccgatt
    15841 agcctacaat taaaggcagg aaaaaatatt actatcttag gcgaaaccgg ctcaggcaaa
    15901 agcctgctga ttcaagcgat tatgggggcg ttacccgacg gcttaatcgc aagcggtgaa
    15961 atttcggtaa aaaattgcaa aatttccacc gaatccgacc gcttgcaaac attgtggggt
    16021 aaaaccttgg taatgctgcc acaagagcct cgccgctcgc ttaatccgat tatggcaatc
    16081 ggcaagcagt tgtgggaaag ttttcactat gtggcaggca aaccatcatc tcaagccaaa
    16141 acggaaagca aagcctattt agccaaactt gggctgggcg aatcggttga aaactaccca
    16201 caccagcttt ccggtggaat ggctcaacgt gcctcttttg cgattgcaac tgccgccggt
    16261 ggcaaaattt tacttgccga tgagccgacc aaagggcttg acccaatcag taaaggcaaa
    16321 gtgattgaac tgttaaaatc cgcctaccaa aacggtggag gcttgctcac cattactcac
    16381 gatattgaag ttgccgagca actcggtggc actattttag tgatgaaaaa aggcgaactg
    16441 ttggagcaag gtgaggcaaa agcgttgtta aataacccac aacaccctta caccaaagca
    16501 cttatcagtg ccgatccaaa acattggcaa ccattgcaag atctgcaaaa tttaagccaa
    16561 aaacaaccgc ttgtttcggt taaaaatttg agtattgccc gtggtaagaa aacgctgttt
    16621 agcaaccttt cctttgactt acacaaaggc gaagtgcttg ggattgtcgg gcatagtggg
    16681 attggcaaaa gctcgcttgc cgatgtactt tgtggtttgc ttaagccgaa atcgggcgag
    16741 gttgtgtggc acagccacag ccataaaaaa caccaagtgt tgaagcttta ccaagaccca
    16801 ccggaagcct ttgctccgaa tgtcagtcta aaaaccttgc ttgatgatgt gattaacaag
    16861 caccaattag atcgactgcc gattccaagt ttactgcaac aactttcgct caacccagaa
    16921 attttgcaac gcaatgcgga aaatgtctcc ggcggcgagc tacaacgagt agcaattttg
    16981 cgagccttgc tcttagaacc ggtactactg tttgccgatg aagtcacttc tcggcttgac
    17041 ccaatcacac aacaagaaac gatagaattg ctgatcaacc agtgccgagc gagaaattgc
    17101 agtctgattt tggtcagtca cgatccttat ctaattgaga aatcgtgcga taaagtgatt
    17161 aatttggaag agtatgtggg ctaacaagcg gttcaatttc tgagattttt tgcggctcta
    17221 aaaacaaaaa tgcgaagaca tcagttcttc gcatttttct tacttattcc ttattgccca
    17281 gccagcttct gccgtacaat ttcaaacaga cagaccccgg ttgcaactga gacattcaaa
    17341 gaagatactg agcccgccat tggaatgctg ataagctggt cgcaatgctc acgggtaagg
    17401 cgacgcattc cgtcgccttc tgcccccata actaacgcaa tcgagccggt taattttgct
    17461 tcataaatgc ccgattccgc ctcacctgcc gtgccgacaa tccagacatt atgccgttct
    17521 tgtaaatctc gcattgtgcg agccagattg gtaactcgaa tcagtggcat cacttccgct
    17581 gccccacagg cgactttgcg agcggttggt gtaagctgag cagatttatc tttcggcaca
    17641 ataaccgcat caacccctgc cgcatcagcg gtacgcaaac aagcccctag gttgtgaggg
    17701 tcggtcacgc catctaaaat caacaagagt ggatttttct tttggcttaa gatcgcctct
    17761 aaatcgtgtt cattcagctc tttttgtggc acgactctgg caataatccc ttgatgcact
    17821 tcaccttgcg atttgttatc taaggtttgg cggttcactt gttgaattgc cacccctaaa
    17881 cgttgtaatt catttaatag tggcattaag cgtttatctt cacgcccttt tagcaccagc
    17941 acttcaatta aacgctcagg tgcattatcc aaaaaggctt tcactgcgtg aatgccataa
    18001 atttgttcgc tcatatttta tccttaataa ttgggcgaac ccatcagctc gcccatataa
    18061 atacctaact aaagcaacat cttcacaatt ttatccaact taaccctgcc gaattttttc
    18121 agcaatttac gcacattttc agggtaatcg gttaaaactt ccaaatcact gtagtgagtt
    18181 aaaatctgcg tatgttggca aatttggttt aactccgttt ctgctttttc acttaattga
    18241 tgttgaggat cggaaattaa aattgcattt tcggcatcta accgccacgc tcttgggtta
    18301 aggttattgc cggtcagcaa aatatagcgg ttatccaccc aaaccccttt taagtggtag
    18361 ctgttttcgc catctttcca taagcgaatg gttaactgtt tattttgtac ataaccgtcc
    18421 aaccgttttg caaaggctcg taagttcttt tcatacaaat aaggcagagc cgatgccatc
    18481 gtgaattttt cgtccggctt ggtgtagaaa tcattagcgg ttttatcccc cacaataatt
    18541 tcaaccgatt tgccgtttgc caatagccat tcaatacggg ttctcagaga atgcggaaaa
    18601 ttaaaatacg gagtgcaaat cgttaatttc tgctcagttt gataaaacaa cgcttcaatc
    18661 actttattta actgattctt acgtcgccct aagcctacta aaggagaaac cgctaagcga
    18721 ccattttcag caacaccgtt aaataaatac gcttcccgac ttaattgttt gcggaaatgc
    18781 ttaatttgcg cacgaatttc agccgttttc gggcgatttt ccgtatctaa acgttttacc
    18841 gcttcattgg ttaaaagatg ctgttgaata aacgtcaccc agctatcggc aagaacttta
    18901 ttttcaatga cgtggtaacg gtcataacgg taacgttcaa attgatgcaa atacacatta
    18961 ttaatgcttg ctccgctata caaaatcgta tcgtcaaata cgaagccttt caaatgcaat
    19021 acaccaaaca cttctcgtcc gttaatcgac acaccgtaaa aggcaatctc ttgccctgcc
    19081 ggtaaacctt gttcgtattt aacttttgca taccagtcgg cgttagataa attctctgcc
    19141 tcaccaatac gcccacgttg ggctcggtgc caatcaacca aaatgttaat ttccagttca
    19201 ggattatttc gcttcgcttg atataaagca gctaatactt cctgcccggc ttcatctttt
    19261 tcaaagtaaa gagcggttat ataaatacgc ttttttgccg tttgaatcag ctgtaaaatt
    19321 tgttgtttaa acgctttgct cgaggcgaga aactgaacct gctctgccac ttgtggtaag
    19381 tatggcaggc ttttcaatag gtattcagct ttacgttgtt tgttcaaaat taacatcatt
    19441 gattccaaaa ttttcaatcg ttgcctgcta ttttacactg aaatcgccaa taaagcgatt
    19501 ttcgcttaac ggcattgata gctggtcaaa cgattaggat cttctccggt ttgataaatt
    19561 gcgactttcg gataagcaca aagcgggatc tgcttggctt tattagggta aagctcaccg
    19621 gctttggcgg caatactttc cggctccagt cctttctcaa cccaattttc aagggcagtg
    19681 agcatatcaa aatcattcac cgttgcccct cgcccacaat ggttcattgc cgacacgaaa
    19741 aacaattttg caaaatgttg cggattttcg accgcttgtt gtaggctttg ataccaattt
    19801 ttgagatcaa ctgccgaaaa aatcgggtct gaaacgcctt gataaatcag cattttgcca
    19861 ccgttctgct taaaagcgga taaatcaact tgatctgtat cgtgaatgct ccctaccgct
    19921 ttcacttgtt cgctggcttg atccaaatct acgctgagtg gatcacggct cggcactctg
    19981 ggggctaaat agtaatgggt caaacttttc aatcccattt taaaactaat gctgttgggc
    20041 tgagcggttt ggctatcacc taatttccaa tcccgccagc ctttagcgtt aatgccggaa
    20101 tcatacgccc aagggctata aatcagctcg cctcgactgt ttttcgcccc ctcgaaaatc
    20161 gttttgatta aagcgacttt tttctgcccc agttgctttg ccaccatttc cggctggaaa
    20221 tcacactgtt cccacgcatt aattaaaccg tctgctaagc cgtctaactt atcgcaacgt
    20281 gttaatacgc cattggcaat cacatctaaa tcttgttgag tgagggcttg ggataaaatt
    20341 ttgtcgccat caccattctt cggagcaact gccaacaagg ctcgattatc ccatacttcc
    20401 gccaagactg aacgggaaac ccgaaagccg gggctgcctg caatcacacc gtcaaattcc
    20461 tgtggataac gcattgccgc catcatcgcc tcacgaccac cattcgagca gcccataatg
    20521 taattgtgct tgctcggttt tcggtaaaat tcggcaatca actgcttggc aaccgtggtc
    20581 actttgccga tagaggcata ggcataattt gagcgagctt cgggatctgc ggtaaacact
    20641 aaatctcgag tggcgtgacc actgtcgtta ctcactactg catagcctct gtttaagcca
    20701 tttgcaccac tcgccccgtg cggatagagc ttaccaatgg cagggaaaat caccccacct
    20761 acaccgcccg ccccctgaaa taagaatttt tcattccatt gttcgggtaa acgtagctca
    20821 aattgaatac cgtaaggaac attatccacc tccacccgtt ttccaatttc accttgtact
    20881 aaacagtaag ccggcaactc agcagatttc tcaacccatt cagctttata aatagccgtt
    20941 ttttccggcg agttagattt taacgcgaca cattgttcag ccatagaatt agccaaagca
    21001 gtgtgagaaa aaacggagag aaaaataaaa agaaaagcga ttattttcat catttacatc
    21061 aatacaagcg gttatttttc cgaaaatttt tgcaaatttt aaactgagtg tctatctatc
    21121 gctggaaaag ctaaggcaga gtttcctctg ccttagaaag atgaattgaa ttacatttta
    21181 agcaaacaag cgtttttcgc cttcgccggc tacgttttcc acacaacgtc cgcaaacttc
    21241 ttcgtggcca gagtgcgagc cgatgtcggt agcataatgc cagcaacgag ggcatttctc
    21301 accatctgca ttttccactt ttactgcgag tccggctaat tcgccttccg caatatctgc
    21361 ttccgccagt ggtttaacaa tcgcttgtga ggtaatcagc acaaagcgta attcattgcc
    21421 aagttgttct aataacgggc gaatttcatc attggcgaat accgtcacct tggcttctaa
    21481 gccagcacca attactttgt ctttacgggc ttgttccagc acacggttga cttccgcacg
    21541 cacttttaag atttgttgcc agtaagcatc atctaattta tcttgctcgg ttaaaccgaa
    21601 taatccggtg tagaattctt cggtaaagac aaattcactt ctgccttcca cctgcggtaa
    21661 gtagccccaa atttcatcgg ctgtgaagga taaaatcggt gcaatccaac gtactaacgc
    21721 ttctgcaata tgccataacg ctgtttggca gctacggcgg gcaaggctgt cggctttggt
    21781 ggtgtattgg cggtctttga taatatctaa gtagaaagac cccatttcaa tcgagcagaa
    21841 acgcattaaa cgctgtacta ccgtgtggaa ttggtagtta tcataggctt ctttgatgtc
    21901 gttttgagcc tctaaagcac aagccaccgc ccagcggtct aaggcgatca tctcttgcgg
    21961 ttgaactaaa tcactttttg gatcgaaacc gttcaagttc gccaataaga aacgggctgt
    22021 gttacgaata cggcggtatg attccccggc actgtttaaa atattgtgcg aaacggtaat
    22081 ctcaccggta tagtcggtgg aggcaaccca taagcgtaaa atatctgcac cgtttttgtt
    22141 ccacacttca cttggcacaa ttacgttgcc aagcgatttg gacatttttc tgcctttctc
    22201 atctacggta aaaccgtgag ttagcacttg tttgtatggt gctttgccgt tagtagcagt
    22261 ggaaagcatt aaagatgaca taaaccaacc acgatgttgg tctgaacctt ctaaatacat
    22321 atccgctgaa ttgccgttaa attcagggcg ttgttctaca acagaggcat aggtcgatcc
    22381 tgaatcaaac cacacgtcta aggtatccgg cactttgcgg taatctttgg cttcttcacc
    22441 gagcaattcc gcaggatcta aatcccacca cgcttgaatg cctttttctt ctacacgttt
    22501 cgccacttct tcaattaatt ctaaagtgcg aggatgtaat tcttcggttt cattatgcac
    22561 aaacatcgcc attggcacgc cccaagtacg ttggcgtgaa atacaccagt ctgggcggtt
    22621 tgccaccatc gtatcaatac gagcttcacc ccagcttggg atccaacgca ccgatttgat
    22681 ttctcctagt gcttgctggc gtaagccttg ggtttccatt ccgataaacc attgtggggt
    22741 agcacggaag ataatcgggg ttttgtgtct ccaacagtgc ggataactat gcttgatgcg
    22801 ggataatttt aataatgctc ccacttcttg taatttttcg actactttat cgttggattc
    22861 aaacacacct aagccggcaa agaacggggt gtctgctttg aatttaccgt cattggaaat
    22921 tagccctgcc atttcaatgt tatatttgcg agcgaccacg aagtcgtccg caccgtgatc
    22981 cggtgcagta tgcactaacc ctgtaccacc gtctgtggta acgtggtcgc caaaaataaa
    23041 tggcacgctg taatcataga atgggtggtt aaagcgtaat aattctaagt tttcgccttt
    23101 ggtggttgct aaaatctcag cagattcaac gcctgctgct tttgcaacat cttcgactaa
    23161 atcgaccgct agtaacacac gctcatcacc taattggact aaggcatagt ctaattcagg
    23221 gttgatcgca atcgcacggt tagacggaat agtccaaggg gtagttgtcc aaataaccgc
    23281 agataatgcc cctctacctt taccctgtgc gttgaatttt tcttctaccg catttacgtc
    23341 cacagcatta aaacgcacat aaatagaggg agaaacttta tcttcatatt ccacttcagc
    23401 ttccgctaac gaagatccac aatctaagca ccaatgtacc ggttttgaac ctttgtataa
    23461 atgcccgttc gcaatcactt tgccgagcgt gcgaataata ttcgcctcag tgttaaaatt
    23521 cattgttagg tatgggttat cccaatcacc taaaataccc atacggataa aatcggcttt
    23581 ctgaccttct acttgttctt tcgcatagtc acggcacgct tggcgaaact cggcagccga
    23641 aattttctca tttggtttac caacaatccc ttctactttc agctcaatcg gcaaaccgtg
    23701 acagtcccag cccggcacat aaggggtatc gaaacctaat gcggttttcg atttcaaaat
    23761 catatctttt aaaattttat tcactgcgtg acctaagtga atattaccgt tagcatacgg
    23821 aggaccatca tgcaaaataa aggttttctt gcctttcgag gcagtacgaa ttttttggta
    23881 taaatttttg tcataccaat tttttaacat atcgggttca cgtttcgcga gatccccacg
    23941 cataggaaag cctgtttcag gcaagtttaa ggtgtttttg tagtcaatag tcattttttt
    24001 atttctcgtt aaaattatct gttttatgcc tagcacggca tagccgtact aggttaagca
    24061 tagctcagcc cctctggggc tggaaactag aaaggctcac cttgcaaatt ccttaaaaaa
    24121 ttcaaccgct tgcaagcgat ctttctcaat ctgggctttt agtgcttcaa agtcgggaaa
    24181 ttttatttca ttgcgtaatt tttttaaaaa gatcacttca atcgcctcac cgtaaataga
    24241 ggcattgaaa tcaaaaatat gcacttctaa taacggctta gtaccgttaa tggtcgggcg
    24301 gttgccgaca ttggcgattc cgttaaaact gccctgtttg gtcttcactt ttaccgcaaa
    24361 taccccttga atcggcgtaa ccaaacgatt gagcataata tttgcggtag gaaaaccaat
    24421 ggttctgccg agtttattac cgtgtgcaac gcgtcccaga atcgaataag gcttgccgag
    24481 taatttctct gccaaatcta actcattgtt ttgtaaggct tctcgcacta atgagctgct
    24541 aattctttct tcgtttaagc tatgggtatg gctttcttcc accgcaaagc gatattttaa
    24601 gccggcattg cgtaaagttt caaaactgcc cgcccgtttt gccccaaagc gaaaatcatc
    24661 gcctacactt aaatagcgta ctttcagtct tttagcgagc aaatcgctga tgaaatcgtc
    24721 tgccgaaatt tgagcaaatt tttcactaaa acgcacgcat agcacaaaat ccacaccggc
    24781 ttcttccaaa tattttagct tatctcgcag gcgcattaag cgggcgggcg ggttacaagc
    24841 ggttgaattt ccactttttt ttgcaaaaaa ctctcgaggt tgtggctcaa ataacatcac
    24901 aactgagggc aatcctaaat ctaaagctct atcacaaaga cgagccaaaa tattttgatg
    24961 cccaagatgc acaccatcga aattcccgat agagagaaca cagccttgat ttaaagcgat
    25021 gtgtttgtct aagttgtgga aacctcgaat aagttgcata aaagataaac cattttataa
    25081 gtgaaaattg ctgtgattat aacgagaaat ctacaaaaaa ggaaaaaaat tcaatctgtt
    25141 atattttttt agtgctgaaa gtggtcgtgt agc
//
LOCUS       DANLTI010000020        25064 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.020, whole genome shotgun sequence.
ACCESSION   DANLTI010000020 DANLTI010000000
VERSION     DANLTI010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 25064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25064
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.020"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            50..1003
                     /locus_tag="PXB09_000658"
     CDS             50..1003
                     /locus_tag="PXB09_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232803.1"
                     /translation="MEIILRLLWRRLMALPVMILGVTALVFIVLQFTPGDPATVALGE
                     SASEAAKEIYREQHGLNDPLLVQYFRFLGNLFVLDFGMTTPPEQPIVDMIAKAFPLTL
                     QLTFIGVFLAAIVSFTLGVTAALYRDTWIDQLIRLISVAAVATPSFWLGILLIQYFSL
                     KLDWLPSGGFIPFSEDPKGYVNSMVLPSLALAVPVCASLIRVVRTTMVEEMDKDYVRT
                     AIGNGVPYSTVIRHNVLRNALITPVTVLGLRVGYLLGGAVVIEQIFDLPGMGKLIFNG
                     IVNHDLNLVQGVVLTIAFTFVLVNIIVDILYLLINPKIRSL"
     gene            1005..2975
                     /locus_tag="PXB09_000659"
     CDS             1005..2975
                     /locus_tag="PXB09_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDL5232804.1"
                     /translation="MFRQGLAARLASGGARFRALSTSSKIALLFIVFIALVAIFAPLV
                     APYDPLQTLRPVQAPSGDYLFGTDRLGRDIFSRMVWGARTSLFIGLGAVGVAILFGSI
                     LGATAATADKFGNEVIMRFMDILMAFPGIALAAVLLATFGNSVPVIIVTIAVVYTPQL
                     ARVVRANVVSQWEEDYVRAERVIGGSRTYILLKHVVRNTAAPVLVFATVMVADAIVFE
                     ASLSFLGAGVQPPFPSWGNILSEGRNLVLSGFWWATTFAGIMILLTVLALNILAEGLT
                     DALVNPKLKRSTQSKEDVAKPLATDVQEAMSETLALKRYLLKLHEKETTRTDRMQLNS
                     TAKPILQVKNLSIRFPNRYGETPLVDNISFTVHEGETMGLVGESGCGKSITAFSIMGL
                     LPKTAKITGEILFTDRSGKQHNLLESADLNALRGHEISMIYQDALSALNPSMRIKDQM
                     AQLISRGGKQSAETLLQWVKLDPEKTLNRYPHELSGGQRQRVLIAMALAREPKLLIAD
                     EPTTALDVTVQAEVIKLLNELREKLGFAMVFVSHDLALVAQIAHHITVMYAGQVVETA
                     PTTPLLANPTHEYTRGLLGSVLSTELRAERLYQIPGSVPSPFDFAKGDRFASRSLRPD
                     ANPEQHLKLVPTGDHPQHFWASHLEDPQSKEA"
     gene            2990..3796
                     /locus_tag="PXB09_000660"
     CDS             2990..3796
                     /locus_tag="PXB09_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232805.1"
                     /translation="MSMKFIKEQPIIELSNIVVQFASRDGTLFNPKKFTAVNDVSLAI
                     HAGETVGLVGQSGCGKSTLASVMIGLQKPTSGTVKFNGLEMKYGSAEARKYFGSQVSV
                     IFQDPATALNPRMRVLDILKDPMDIHNILQPQEREKRVYDLLSRVGLPRSAALVEPTR
                     LSGGQKQRVAIARALALNPKLIVADEPTSALDVSVRAQVLNLLADLKKELNLAMVFIS
                     HDLQTVHQVSDRIVVMNGGKIVEMGDASDVFERPTQEYTRTLIEAAPSLL"
     gene            3859..5445
                     /locus_tag="PXB09_000661"
     CDS             3859..5445
                     /locus_tag="PXB09_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDL5232806.1"
                     /translation="MIQITQTINIDLLIVGSGIAGLSAAVEAKEKGINTLLISKSTIG
                     SGASYFPLKATLGIQVTGDEADKIHFKEDIENIGKGKINPNVVQAYIEDSPQAIELLH
                     RIGFQPWKRNDNRPACFAKYPRPIYLIKDWRESALRAKQILQEQHIAFYENATLLHIV
                     TDNNQVQGAVFSLTTSGQISYIFCKTKHLILAAGGIAGLYKDNLYPADVIGSLHYVAQ
                     QAGATLVNLAFIQFIPAFVEPKYKVLFGEHTLKYVTQITDSKGNNLFPHLNAEQFAKM
                     VLERSHYAPFSLDFAGVEFDLVMMKHLLENPHEKGIYLKYSPKLYEDTEEFYTVYLNW
                     LKNEVGIDLVQDKIAIKPFAHSCNGGIQINQWGESAVKGLFAIGEISHCIEGANRMGG
                     NSVGGGLVFAKRAVSEIVRSLEQNDLQKNSEISPLAMAEKALNQLANSTANLELTASE
                     VLSTIREKMALYANVYRTRSNLKLLLEELNRLEQEFDPIYHAQYQGIEIYNALKTAQL
                     VVNQMLNEQSLGAHYLDEQN"
     gene            5491..6873
                     /gene="nhaC"
                     /locus_tag="PXB09_000662"
     CDS             5491..6873
                     /gene="nhaC"
                     /locus_tag="PXB09_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5232807.1"
                     /translation="MNNYLLKLKPMTAVILSLLTVFILGFTMIGLGWVPQISILAVIV
                     MLLLFGLINKIPFKNMQEGMASGLMSSIGAVYLFFFIGLLVSALMMSGAIPTLMYYGL
                     SVISPELFYISAFALSSVVGIALGSSLTTTATIGVAFIGMASAFGANPAIVAGAVVSG
                     AFFGDKTSPLSDTTTIAASVVGIDMFAHIRNMLYTTIPAWILTALFLWFLTEPTDAQN
                     LANIENLKTNLQETGLIHGYSLLPFVTLILMAIKRVNSIYIIVTTVTLSLIITYIHSS
                     PTLEQLGNYFFTSYKPVEGVDLGEVASLVSRGGINSMFFTITIVLLALSLGGLLQILG
                     ILPALLNGISGFLTSTGRVTLVVASTAVGINVLIGEQYLSLLLSGNTFRSTYERLGLE
                     VKNLSRTIEDAGTVINPLVPWGVCGVFISSVLNVPVLDYLPYAFFCYICLILTLIFGF
                     TGVTISKKAN"
     gene            complement(6916..8112)
                     /gene="ispC"
                     /locus_tag="PXB09_000663"
     CDS             complement(6916..8112)
                     /gene="ispC"
                     /locus_tag="PXB09_000663"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDL5232808.1"
                     /translation="MKKLVILGSTGSIGKSTLSVVEHNPNPNQYEVFALVGGKNVELM
                     LEQCRQYQPTFAAMDDEKSAQALKTALATLGSKTEVLAGQAAICELAAHSEVDMVMAA
                     IVGAAGLLPTLSAVKAGKTVLLANKESLVTCGQIFIDEARKSGAKLLPVDSEHNAIFQ
                     SLPPEAQQKVGFCPLAELGVSKIILTGSGGPFRTKPLNEFDAITPAQAVAHPNWSMGK
                     KISVDSATMMNKGLEYIEARWLFNATAEEMDIIIHPQSIIHSMVRYIDGSVIAQMGNP
                     DMCTPIAHTMAYPNRINAGVPPLDFFKLKELTFIEPDFARYPNLKLAIEAFAEGQYAT
                     TAMNAANEIAVEAFLNEQIRFTDIVNVNRTVVENIAPIQVSEIADVLHIDKLARELAK
                     QAVLQL"
     gene            complement(8231..10429)
                     /gene="relA"
                     /locus_tag="PXB09_000664"
     CDS             complement(8231..10429)
                     /gene="relA"
                     /locus_tag="PXB09_000664"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDL5232809.1"
                     /translation="MVAIRYSHQLEPNNFELSSWCASLNMSPVTFEQIHNAWSYAQEK
                     LDTDYSLMWYGIEMVEVLHGLNMDDDSLVAAMLFPLVKHNVIDLVQLKEDFSNDIKNL
                     VKGVLEMENIRQLSANNVSDLQIDNIRRMLLAMVDDFRCVVIKLAERIAYLRDSNHHS
                     EEDTVLAAKECSHVYAPLANRLGIGQLKWELEDYCFRILHPVSYTQIAKFELGERRVD
                     RERYIANFVADLTACLSPEIKNVQIYGRPKHIYSIWKKMQKKRLRFNQLFDIRAVRVI
                     VPTLEDCYTALGIIHTKYTHLPEHFDDYIANPKPNGYQSIHTVVLGEGEKTIEVQIRT
                     QQMHDDAELGVAAHWKYKEGATAGRSGYEEKIVWLRKLLEWQNDLADSGDMVAEMRSQ
                     IFDDRVYVFTPRGEVIDLPQKATPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYHLQMG
                     DQVEIITQKEPNPSRDWLNPNTGFVNTGKARSKIIAWFKKLDREKNIPIGKEALEAEM
                     EKFGFTLKQIEEYALPRYNLKQFDDLYAGIGGGDIRLHQLMHFLQSKLIKPTAEQEDE
                     AVLKQVNKNTNQPKPSKGYVIVEGVGNLMHSIARCCQPIPGDEIVGYITQGRGISIHR
                     ADCEQLFELQSLNPERVVEADWGEGYTSGLSLTIRVIANDRNGLLRDVSAIMANEKVN
                     VLGVSSRTDVKRSLATIDMEIQLNNVEILNKLLARIAQLDDVIEAKRLSS"
     gene            10683..11990
                     /locus_tag="PXB09_000665"
     CDS             10683..11990
                     /locus_tag="PXB09_000665"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDL5232810.1"
                     /translation="MTILALGINHKTASVGLREKVAFVDDKRKLALEQIQTSGLAESV
                     VILSTCNRTELYFHQPNISPREESEENIQWREQCFRWFAQIHQLDESELRECLYFKQN
                     LEAANHLMKVASGLDSLILGEPQILGQVKQAYQYSEDFYQHQQKAMSTKLSRLFQRTF
                     ATAKRVRSETEIGSQAVSVAYAACGLARQIFDNFGKLRFLLVGAGETIELVARYLIQH
                     GAKNIMLANRTHIRAEMLAEKLNAPMQILSLSALQLGLNQADVVISSTGSPDTLISKE
                     MVEIAQKQRQFDPLLLIDIAVPRDIDEKAGDLEGVYAYSVDDLQNIIQRNMAQREEAA
                     KQAAEIVKEESKAFFEWLKQQQSSDLIKRYRQDAEQTRQELLEKALQAISQGQDSQKV
                     LSELSYKLTNQLLHAPTQALQAMAKSGNSTGLQSFSRALRLEE"
     gene            12175..13710
                     /gene="der"
                     /locus_tag="PXB09_000666"
     CDS             12175..13710
                     /gene="der"
                     /locus_tag="PXB09_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDL5232811.1"
                     /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGH
                     ANIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPADVGI
                     AQYLRQREKTTVVVANKTDGIDADSHCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLA
                     PLGEQLNAEQFNQEQAGENAKNVANEETDEWDTEFDFENEEDAALLDEALAEEAEESI
                     EDKNIKIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQQYTIID
                     TAGVRKRGKVNLAVEKFSVIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFILNAGR
                     SLVIVVNKWDGLSQDIKDQVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSVKEAY
                     ACATQKTSTSMLTRILRMAADEHQPPLVNGRRVKLKYAHPGGYNPPIIVIHGNQVEKL
                     ADSYKRYLSNYFRKSLKIIGSPIRILFQEGNNPFAGKKNKLTPSQLRKRKRLMKFIKK
                     SKK"
     gene            13806..15233
                     /gene="hldE"
                     /locus_tag="PXB09_000667"
     CDS             13806..15233
                     /gene="hldE"
                     /locus_tag="PXB09_000667"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDL5232812.1"
                     /translation="MMMQYSPKFNNAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKV
                     QDIEERAGGAANVAMNIASLGVPVTLHGLIGDDDAGRALDKLLNSHQIQNHCVVINSH
                     PTITKLRILSRHQQLLRLDFEEGFHNVDSTALLAKLSQEITAYGALILSDYGKGTLES
                     VQQMIQIARNAKVPVLIDPKGTDFERYRGATLLTPNMSEFEAVVGHCKDEDEIVSKGL
                     KLIADYDLSALLVTRSEKGMTLLRPNHEPYHLPTQAKEVYDVTGAGDTVISVLATAIA
                     DGRAYEEACYLANAAAGVVVGKLGTSTVSPVELENAIHQRTATGFGVVSEAELKAIVE
                     EAKKRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNTDASVKRLKGEARPIN
                     DLAARMAVLAGLASVDWVVPFDEDTPQRLISEILPDLLVKGGDYKPEEIAGSQEVWAN
                     GGDVRVLNFENGCSTTNVIKKIQAL"
     gene            15247..15801
                     /gene="pyrR"
                     /locus_tag="PXB09_000668"
     CDS             15247..15801
                     /gene="pyrR"
                     /locus_tag="PXB09_000668"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDL5232813.1"
                     /translation="MAREKIIIDTEQFQRTISRISHQIIEKHGDLQDVVIVGIKRRGA
                     EIAELIQKRIEDLAQTRLPYMALDITFYRDDLDLIYQDPVFMGADNQLNLNGKKVILV
                     DDVLFTGRTIRAALDALLDFGRAARIELVIFVDRGHRELPIRADYVGKNIPTAKNEQI
                     QVQTLSYDGINQVVLVPAANKESA"
     gene            15874..16824
                     /locus_tag="PXB09_000669"
     CDS             15874..16824
                     /locus_tag="PXB09_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5232814.1"
                     /translation="MKMKLVKSLFAVAVATMSLTQTAHAFEERVVALVNDTPIMQSQV
                     QRVLGKKKATETAQRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITY
                     GQLLDALDYQGITLEQFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDK
                     AAGKLKTVSGKEHRISHILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSV
                     DYASGADGGDLGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDR
                     TEDAYHQRAYQQLVNKQAEEASKDWVKALRKTANIQYVGQ"
     gene            16886..17752
                     /gene="rsmA"
                     /locus_tag="PXB09_000670"
     CDS             16886..17752
                     /gene="rsmA"
                     /locus_tag="PXB09_000670"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDL5232815.1"
                     /translation="MSSTNSKKHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFL
                     LEIGPGLGALTEPVAELVDKLTVVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRD
                     YFNQLNLDEDSVRVFGNLPYNISTPLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNS
                     KAYGRLTIMAQYYCQVIPVLEVPPTAFKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNR
                     VTTQAFNQRRKTLRNALSTLFSAEQLDALGVDLTARAENLTIADYVRLANWLHDNPPA
                     IDTTEELVDEDC"
     gene            complement(17863..18492)
                     /gene="upp"
                     /locus_tag="PXB09_000671"
     CDS             complement(17863..18492)
                     /gene="upp"
                     /locus_tag="PXB09_000671"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDL5232816.1"
                     /translation="MKIVEVKHPLVKHKLGLMREAEISTKDFRELANEIGSLLTYEAT
                     KDLEMESVEINGWSGEKIAVERIKGKKVTVVPILRAGLGMMDGVLEHIPSARISVVGI
                     YRDEETLKPVPYFSKLANDVDERLAIITDPMLATGGSMVATIDLLKKAGCKQIKVLVL
                     VAAPEGIKVLEAAHPDVELYTASIDSHLNENGYIIPGLGDAGDKIFGTK"
     gene            complement(18517..20202)
                     /gene="fadD"
                     /locus_tag="PXB09_000672"
     CDS             complement(18517..20202)
                     /gene="fadD"
                     /locus_tag="PXB09_000672"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDL5232817.1"
                     /translation="MEKIWLNNYPPYSPKTIETDQYESLVEMFEAAIQRHPDIPAYIN
                     MGQVLTFRKLEERSRSFAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVVV
                     NVNPLYTPRELEHQLNDSGAKAIVIVSNFAATLEKIVFNTEIKHVILTRMGDQLSFGK
                     RTLVNFVVKYIKKLVPKYKLPHAVSFREALSIGKQRQYVKPNIVSQDLAFLQYTGGTT
                     GVAKGAMLTHQNLIANMMQAKWIVEPLLGNSANMIGLVPLPLYHVLALSMNCLLFIEL
                     GLTGLLITNPRDIPGFIKELKKYKVSVITGVNTLFNALLNHESFKEVDFSHLKLSVGG
                     GAAIQSSVAKRWHDLTGVHIIEGYGMTECSPLISATRGDSVEYSGSIGVPVPNTDIRI
                     VDDEGKEVPLGERGELVVKGPQVMQGYWNRPDETAQVLQDGWMATGDIVVMGDDLNLR
                     IVDRKKDMIIVSGFNVYPTEIEEVISQNPKVNEVVAIGVPSEASGESIKIFVTKKDES
                     LTRDELRTYCRQFLTGYKIPRDIEFRDELPKSNVGKILRRVLRDEELAKVNKA"
     gene            complement(20180..20644)
                     /locus_tag="PXB09_000673"
     CDS             complement(20180..20644)
                     /locus_tag="PXB09_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HDL5232818.1"
                     /translation="MMIEQATVVEYQNGVAIVQCYAKSSCGGCVAQSACGSKALSALA
                     GEKIDPRFRIEVDEPLKVGDKVELGLAENILLKSVFLIYGIPLLVLVMTAVGFSQFFA
                     NELIVLFIMLLSTGITFWAVRKLIHKHSKQANFSPIFLGKVLGDYNGKNMAK"
     gene            complement(20641..21624)
                     /locus_tag="PXB09_000674"
     CDS             complement(20641..21624)
                     /locus_tag="PXB09_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HDL5232819.1"
                     /translation="MLFKIKKYLLLFWVISACYTFAWAESTIKTPLAYLTAMSEAHKK
                     STYELVYILQQGSDTESFRLRHAFTHNKEYAQLLNLDHSREEIILKNNKVSYLGYNFR
                     PFSLNSSQILDNLPNVLYTDYANLKGYAFLDAGKDRISDRITKVIRMKPNDTLRYAYI
                     LWIDEETHLLLKSQVLNMDNLVLEEFRVLQLYQSPELDRIANVIESLMLPTLTTVKKE
                     EFPKSDGWQVKWLPTGFRLIQQQTVTGATYQVESEYVDSRVYSDGLSTLTIYIMPSQG
                     VSFNEYAWQQGKLTILNQTINDRDIVIIGDVPLQSAKQIMNNIGFKEGAQP"
     gene            complement(21782..22405)
                     /locus_tag="PXB09_000675"
     CDS             complement(21782..22405)
                     /locus_tag="PXB09_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5232820.1"
                     /translation="MQERITQQNERLSAYMDGQNVDTAFVETLTNSPELQQKWASYHT
                     IRSVMQGDEIILGRDFSAKMEALLENEEIESQANVEKPKGLLLKLKRWGTPIMQAGIA
                     ASVCLVAVLGVNSMNASDEIAQTQQPVLQTLPFSNSVEAVSYNAPVQDQPTEEQLELQ
                     QRKINALLENHELQRRTNNVKNLTLSEEEKQKAQTSSNTESEPNIQK"
     gene            complement(22451..23023)
                     /gene="rpoE"
                     /locus_tag="PXB09_000676"
     CDS             complement(22451..23023)
                     /gene="rpoE"
                     /locus_tag="PXB09_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDL5232821.1"
                     /translation="MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVAGLLTRYVARD
                     DIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAED
                     AESYDVGAQLRESDTPENLILSEELKKVVFDTIENLPDELKTAIRLRELEGLSYEEIA
                     EVMECPVGTVRSRIFRAREAIDAKIKPLMQ"
     gene            complement(23245..24789)
                     /gene="leuA"
                     /locus_tag="PXB09_000677"
     CDS             complement(23245..24789)
                     /gene="leuA"
                     /locus_tag="PXB09_000677"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDL5232822.1"
                     /translation="MSNNNIIIFDTTLRDGEQSLKASLTVKEKLQIALALERLGVDVM
                     EVGFPVSSAGDFESVQTIARHIKNSRVAALSRAVAKDIDAAYEALKVAEAFRIHTFIA
                     SSALHVEAKLKRSFDDVVEMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAI
                     NAGATTVNIPDTVGFCLPNEYGNIIHQVMNRVPNIDKAIVSVHCHNDLGMATANSLTA
                     VQNGARQIECTINGIGERAGNTALEEVVMAIKTRQEFMGVDTRINTQEIHRVSQMVSQ
                     LCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSG
                     RAAVKGHMADMGYTETDYDLDKLYEAFLQLADKKGQVFDYDLEALAFIDMQQGDEDRL
                     KLDVITTQLISGLPASAFVQVELDGVRQSATSQGGNGPVEATYNAIMNIVGMELKMSH
                     YNLTAKGEGAEALGQVDIVVEYEGRKFHGVGLATDIVESSARALIHAINAIYRSQKVA
                     DLKAKK"
BASE COUNT         7198 a         5408 c         4981 g         7477 t
ORIGIN      
        1 gtaaacttag atttaatttt ggagtgtaac tacactcaag gagaagaaaa tggaaattat
       61 actccgatta ttatggcgtc gcctaatggc tctgccggta atgatcttag gcgtaactgc
      121 cttggtattt attgttttac aattcacccc cggagatccg gcaaccgttg ctctcggtga
      181 aagcgccagc gaagccgcta aagaaatcta tcgtgaacaa catgggttaa atgatccatt
      241 gcttgtacaa tattttcgct ttttagggaa tttattcgta ttagatttcg gtatgacaac
      301 ccctccagaa cagcctattg ttgatatgat tgctaaagca ttccctttaa cattacagct
      361 tacctttatt ggggtcttct tagctgctat cgtctctttc acattaggtg taacggcagc
      421 actttaccgt gatacttgga ttgatcaatt aatccgttta atctcggttg ccgctgttgc
      481 cacaccttct ttctggttgg gtattttatt gattcaatac ttctccttaa aattagattg
      541 gttgccttca ggcggtttta ttccatttag cgaagatcca aaaggctatg taaactcaat
      601 ggttctccct tcactcgctt tagctgttcc tgtatgtgcc tcattgatcc gtgtcgtgcg
      661 tacaacaatg gtagaagaaa tggataaaga ttatgttcga acagccatcg gtaatggtgt
      721 accttactca acggtgattc gccacaacgt gcttcgtaat gccttaatta ctccggtaac
      781 agtattaggt ttacgggttg gttatttatt aggtggtgca gttgtgattg aacagatctt
      841 cgacttaccg ggaatgggta aattaatttt caacggtatc gtcaatcacg acttgaactt
      901 agtgcaaggt gtagtattaa ctatcgcatt tactttcgtg ttggtgaata tcattgttga
      961 tattctttac ttgctcatta atccaaaaat tcggagttta taatatgttt cgccaaggat
     1021 tagctgctcg acttgcttca ggcggtgcaa gatttagagc attatcaacc agctcaaaaa
     1081 tcgccttact ctttattgta tttatcgcat tagtcgctat ttttgcacca ttagtagcgc
     1141 cttatgaccc actgcaaacg ctacgtccag tgcaagctcc aagcggtgat tatttattcg
     1201 gtacagaccg tttaggacgt gatattttct cgcgtatggt atggggagca agaacatctc
     1261 tctttatcgg tttaggtgcg gtaggcgttg cgattctatt cggtagtatt ttaggggcaa
     1321 ctgcggcaac cgccgataaa ttcggtaacg aagtgattat gcgttttatg gatatcttaa
     1381 tggcattccc gggtatcgca ttagctgctg tattacttgc cactttcggt aactctgtac
     1441 ctgtgattat cgtgactatt gcggttgttt acactcccca acttgcccga gtggtgcgtg
     1501 ctaacgtagt atctcaatgg gaagaagatt atgtgcgtgc cgagcgtgta attggtggta
     1561 gccgtactta tattctatta aaacacgttg tgcgtaatac tgctgcaccg gttttagtat
     1621 tcgcaacagt gatggttgct gatgccatcg tatttgaagc atcactttca ttcttaggtg
     1681 caggtgtcca gcctccattc ccatcttggg gaaatatctt atctgaaggt cgtaaccttg
     1741 tattaagtgg cttctggtgg gctacaactt tcgcagggat tatgatttta ttaaccgtac
     1801 ttgcgttaaa tatccttgct gaaggcttaa ccgatgcgtt agtaaatcca aaactaaaac
     1861 gttcaactca aagtaaagaa gatgtcgcaa aaccattggc aacagacgtt caagaagcaa
     1921 tgtctgaaac tcttgcgtta aaacgttact tactcaaatt acacgagaaa gaaacgaccc
     1981 gtactgaccg tatgcaatta aactcaacgg ccaaaccgat tttacaagtg aaaaacttat
     2041 caatccgttt cccaaatcgt tatggtgaaa ctccgcttgt tgataatatc agctttactg
     2101 ttcacgaagg cgaaaccatg ggcttagtgg gtgaatctgg ttgtggtaaa tcaatcaccg
     2161 cattctcaat tatgggttta ttaccaaaaa ctgcaaaaat cactggtgaa atcctcttta
     2221 ccgaccgttc aggtaaacaa cacaatcttt tagaatcagc cgatttaaat gcccttcgtg
     2281 gtcacgaaat ctcgatgatt taccaagatg cattaagtgc gttaaaccca tcaatgcgta
     2341 ttaaagacca aatggcacaa ttaatcagcc gtggtggtaa acaatcagca gaaacattat
     2401 tgcaatgggt aaaacttgac ccggaaaaaa cgctcaaccg ttatcctcac gagttatctg
     2461 gaggacaacg tcagcgtgta ttaattgcaa tggcacttgc tcgtgaaccg aaactattga
     2521 ttgctgatga accaacaaca gcattagacg taaccgttca agctgaagtg atcaaattat
     2581 taaacgaatt acgtgagaaa cttggatttg caatggtatt cgtgagccac gacttagctt
     2641 tagtggcaca aatcgctcac cacatcacgg taatgtatgc tggtcaagtg gttgaaactg
     2701 caccaactac gccattattg gcaaacccaa cacacgaata cacacgtgga ttattaggct
     2761 cggtactttc taccgaattg cgtgcagaac gcctatacca aattccgggc agtgtgcctt
     2821 caccatttga ttttgcgaaa ggtgaccgtt ttgcgagtcg ttcattaaga ccagatgcaa
     2881 accctgaaca gcacttgaaa ttagtgccaa ccggtgatca cccacaacac ttctgggctt
     2941 cacacttaga agatccacaa tctaaagaag cataaaggag agcaatacga tgagtatgaa
     3001 atttatcaaa gaacagccaa ttattgaact gtctaatatt gttgtgcaat ttgcttctcg
     3061 tgacggcacc ttatttaacc cgaaaaaatt cacggcggta aatgatgtca gcctagcaat
     3121 tcacgccggt gaaacagtcg gtctggttgg acaatctggt tgtggcaaat ctactttagc
     3181 cagtgtgatg atcgggcttc aaaaaccaac ctccggcaca gtaaaattta acggcttaga
     3241 gatgaaatat ggcagtgcgg aagctcgcaa atatttcggt agccaagtgt cagtaatttt
     3301 ccaagacccg gcaaccgccc taaatccgcg tatgcgtgtg ttggatattt taaaagatcc
     3361 gatggatatt cataatatct tacaaccgca agaacgtgag aagcgggttt atgatttgct
     3421 ctctcgagtc ggtctacctc gttcagcggc gttggtcgag ccaacccgat tatctggtgg
     3481 gcaaaagcaa cgtgtagcga ttgctcgtgc attggcatta aatccgaagc tgattgtggc
     3541 tgatgaacca acctctgcac ttgacgtatc ggttcgagct caagtactga acctgctggc
     3601 agacttgaaa aaagaactca atttagcgat ggtatttatc tctcacgact tacaaaccgt
     3661 tcaccaagtt tcagaccgca ttgtggttat gaacggcggt aaaattgtgg aaatgggcga
     3721 tgcttcagac gtatttgaac gcccaacgca agagtacacc cgaaccttaa ttgaagcagc
     3781 accatcttta ttataattgt gctttgtgcc tacaagcggt aaaatttttc gcaaatttta
     3841 ccgcttgtgt ttttatttat gatccaaatt acccaaacca ttaacattga tttattaatt
     3901 gtcggctctg gcatcgctgg gctttctgct gcagttgagg caaaagaaaa aggcattaat
     3961 accttactga ttagcaaatc tacgattggc tcgggagcga gctactttcc gcttaaggca
     4021 acacttggca ttcaagtaac cggcgatgaa gccgataaaa ttcactttaa agaagatatt
     4081 gaaaacatcg gcaaaggcaa aatcaaccct aatgtggtac aagcctatat cgaagattca
     4141 ccacaagcga ttgaactact ccaccgtatc ggctttcagc cttggaagcg taacgacaac
     4201 cgtccggctt gttttgccaa ataccctcgc ccaatttatt taattaaaga ttggcgggaa
     4261 tctgccctac gagcgaaaca gattttgcaa gagcaacaca ttgctttcta tgaaaatgct
     4321 acccttttac acatcgtcac agacaataac caagtgcaag gtgcggtatt ttcgctcact
     4381 acaagcggtc aaatttccta tattttttgc aaaaccaagc atcttatttt agccgcaggc
     4441 gggattgctg ggctgtataa agataatctc tacccggctg atgttatcgg ttcacttcat
     4501 tatgtggcac aacaagccgg ggcaaccttg gttaatcttg cctttattca gttcattcct
     4561 gcctttgtcg agccaaaata caaggtgcta tttggcgaac atacattgaa atatgtcacc
     4621 caaatcaccg attctaaggg taacaatcta tttccacact taaatgccga gcaatttgca
     4681 aaaatggtgc tggaacgtag ccattatgct cctttcagcc ttgattttgc cggcgtggag
     4741 ttcgatttag tgatgatgaa acatttgctt gaaaaccctc acgaaaaagg catttacctt
     4801 aaatacagcc ccaaactgta tgaagacacg gaagagtttt ataccgtcta tttgaattgg
     4861 ctcaaaaatg aagtcgggat tgatttagtg caagataaga ttgcaatcaa gccgtttgct
     4921 catagctgta acggcggcat tcaaattaat caatggggcg aaagtgcagt aaaagggcta
     4981 tttgcgattg gtgagatttc tcactgcatt gaaggggcaa accgtatggg tggtaactca
     5041 gtcggcggtg gcttagtgtt tgccaaacgt gcggtatcgg aaattgttcg ttcgctagaa
     5101 cagaatgatt tgcaaaaaaa cagcgaaatc tcaccgcttg caatggcaga aaaagcatta
     5161 aatcagcttg ctaattcaac tgctaatcta gaactaactg ccagtgaagt gctttctact
     5221 attcgagaga aaatggcgtt atacgccaat gtgtaccgca ctcggagcaa cctcaaacta
     5281 ctacttgagg aattaaaccg tttggaacaa gaatttgacc caatctatca cgctcaatat
     5341 caaggcattg aaatttacaa tgcgttaaaa accgctcaat tagtggtcaa tcaaatgcta
     5401 aatgagcaga gtttaggcgc gcactactta gatgaacaaa attagtctat aatagccaac
     5461 ttatttaaaa ataataaatt aggagtataa atgaataact acctacttaa attaaaacca
     5521 atgacagcgg tcatactttc gcttttgacg gtctttatct taggttttac aatgattggg
     5581 cttggctggg tgcctcaaat ttcaattcta gccgtgattg taatgctgct acttttcggc
     5641 ttaatcaata aaattccgtt taaaaatatg caagagggta tggcaagcgg gctgatgtcc
     5701 agtattggtg cggtttacct attctttttt attggattat tggtttcagc tttgatgatg
     5761 tctggtgcga ttccaacctt aatgtattat ggcttaagtg tgatttcacc tgaattattt
     5821 tacatttctg cattcgcatt aagttctgta gtaggtattg cgttaggcag tagtttaacc
     5881 acaaccgcca ccatcggtgt tgcttttatc ggtatggctt ctgctttcgg tgcgaaccct
     5941 gcgattgtag caggtgcggt ggtttcaggg gcgttttttg gcgataaaac ctctccactt
     6001 tcagacacta ctaccattgc tgcttccgta gtgggcattg atatgttcgc tcatatccgt
     6061 aatatgcttt ataccaccat ccctgcgtgg attttaacag cattattcct ttggttttta
     6121 accgaaccta ctgatgcaca aaatttagca aatatagaga acctaaaaac caatttgcaa
     6181 gaaacaggat taatacacgg ctactctttg ctaccttttg ttacgttaat tttaatggca
     6241 attaagcgtg ttaattcaat ttatattatt gtaactacag taacactctc gctaattatt
     6301 acctatatcc acagttcgcc aacccttgaa cagctaggga attatttctt taccagctat
     6361 aaacctgttg aaggcgtaga tttaggcgaa gtggcatcat tagtctctcg tggtggcatt
     6421 aatagtatgt tctttaccat cactattgta ttgcttgcgt taagtttagg tggtctttta
     6481 caaatcctcg gcattttacc ggcactactt aacggcatta gcggcttttt aaccagcaca
     6541 ggacgtgtta ctcttgtagt tgccagcact gcggtgggaa ttaacgtctt aatcggtgag
     6601 caatatttga gcttattgtt atcaggtaat actttccgct caacttatga acgtttaggc
     6661 ttagaagtga aaaacttatc tcgcaccatt gaagatgcag gcacggtaat caacccatta
     6721 gtcccttggg gcgtgtgcgg tgtgtttatc agtagcgtat taaatgtacc ggtgttagat
     6781 tatctaccat acgcattctt ctgttatatc tgtttaatcc ttaccttaat ttttggattt
     6841 accggggtaa caatcagtaa aaaagctaac taatatgtga aaaatgccta caaatttgta
     6901 ggcattttct tttcattaga gctgaagaac agcttgtttg gctaactctc tggcgagttt
     6961 atcaatatgc aatacatcag caatttcact gacttgaatt ggagcaatat tttccaccac
     7021 cgttctattc acgttcacaa tatccgtaaa gcggatttgc tcgtttaaaa acgcctcaac
     7081 ggcaatttca ttggcggcat tcatcgctgt tgtcgcatac tgtccttctg caaaagcctc
     7141 aatcgctaat tttaagttcg ggtaacgggc aaaatccggc tcgataaagg ttagctcttt
     7201 taatttaaag aaatctaatg gtggcacacc agcattaatt cggtttggat atgccatcgt
     7261 gtgagcaatc ggcgtacaca tatccgggtt gcccatttga gcaatcaccg agccatcaat
     7321 ataacgcacc atcgaatgaa taattgattg tgggtgaatg atgatatcca tttcctcggc
     7381 tgttgcatta aacaaccagc gggcttcaat atactccaag cctttgttca tcattgtggc
     7441 tgaatcgact gaaattttct tacccataga ccaattgggg tgagcaactg cttgagccgg
     7501 tgtaatcgca tcaaattcat ttaatggctt agtacggaac ggtccacccg atcctgttaa
     7561 aataatttta ctgacaccca gttcagcgag tggacaaaac ccgacttttt gctgtgcctc
     7621 cggtggaagc gattggaaaa tcgcattgtg ttcactatct accggtaaga gcttcgcacc
     7681 ggatttacga gcctcatcaa taaaaatttg cccacaggtt accagcgatt ctttatttgc
     7741 caacaatacg gttttacccg ctttcaccgc agaaagtgtc ggtaataacc ctgctgctcc
     7801 tacaatagca gccattacca tatccacttc ggaatgtgca gcaagctcac aaatagctgc
     7861 ttgaccggct aacacttcag ttttagaccc caaagttgcc aatgccgttt ttaatgcttg
     7921 tgcggatttt tcatcatcca ttgccgcaaa agtcggctga tattgacgac attgctccag
     7981 cattaattca acattctttc caccaactaa cgcaaacacc tcatattggt ttgggtttgg
     8041 gttatgctca actaccgata aagtgctttt accgatagaa cctgttgaac ctaaaatcac
     8101 taattttttc attttgtttc tctttatcta atgactgata agggcgaaag atttttcgcc
     8161 cctacgccgt aattatgcgg atactcattc gttgtttgta aattgtttag caaaaacaac
     8221 cgcttgtaga ttaactcgaa agccgttttg cttcgataac atcatctaat tgagcgatac
     8281 gagccaataa tttattcaaa atttcaacgt tgttaagctg aatttccata tcaatggtgg
     8341 caaggctacg tttcacatcg gttcggctgg aaacgcctaa cacgtttact ttttcatttg
     8401 ccataattgc actgacatct cgcagtaagc cgttgcggtc attggcaatc actcgaatgg
     8461 ttaagcttaa accagaggta tagccttcgc cccaatccgc ctccacaact cgttctgggt
     8521 tgagactttg taattcaaac agttgctcac aatctgcacg gtgaatcgaa atccctctgc
     8581 cttgtgtgat gtaacccacg atttcatcac ccggaatcgg ctggcagcaa cgggcaatgg
     8641 aatgcattaa gttccctacg ccctctacaa tcacatagcc tttgcttggc ttcggctgat
     8701 tggtgttttt attcacctgt ttaagtaccg cttcgtcttc ttgttcggcg gtcggtttaa
     8761 ttaattttga ttgcaagaag tgcattaact gatgaagacg aatatcgcca ccgccaatac
     8821 cggcatagag atcatcaaac tgttttaagt tatagcgagg cagagcatat tcttcaattt
     8881 gcttgagcgt aaaaccgaat ttttccattt cggcttcaag ggcctctttg ccgattggaa
     8941 tatttttctc tcggtctaat tttttaaacc acgcaataat ttttgagcga gctttgcctg
     9001 tattcacaaa accggtattc ggattgagcc aatctcggct tgggttcggc tctttttggg
     9061 tgataatttc aacctgatcg cccatttgca gatgataagt aaacggcaca atccgccctg
     9121 ccacttttgc tccaatgcaa cgatgcccga tttcactatg aattgcataa gcaaaatcaa
     9181 gtggtgtagc tttttgcggt aaatcgatca cctcgcctct tggggtaaag acataaacac
     9241 gatcatcaaa aatttgcgaa cgcatttctg ccaccatatc gcctgaatcg gcaagatcgt
     9301 tttgccactc aagcaatttg cgtagccaca cgattttttc ttcgtagccc gaacgccctg
     9361 cggttgcccc ctctttatat ttccagtgag cggctacgcc tagctccgca tcatcgtgca
     9421 tttgctgggt acgaatttgc acttcaatcg ttttttcacc ttcgcctaat acaactgtat
     9481 gaatagactg ataaccgtta ggttttgggt tagcaatata atcatcgaaa tgttccggca
     9541 aatgggtata tttggtgtga ataatgccta atgccgtgta gcaatcttct aacgttggca
     9601 ctattacccg cacagcccga atatcgaaaa gctgattaaa tctcaaccgt tttttctgca
     9661 ttttcttcca aatgctgtag atatgtttcg ggcgtccata aatctgcaca ttcttgattt
     9721 caggacttaa acaagcggtc agatctgcta caaaatttgc aatataacgc tcacgatcca
     9781 cacggcgttc gcccaattca aatttagcaa tttgagtgta agagacaggg tgtaaaatgc
     9841 ggaaacagta atcttccagc tcccatttga gctgcccgat acccaatcga ttggcaagcg
     9901 gtgcataaac gtgagaacat tctttagcgg cgagaacggt atcttcttcg gaatggtggt
     9961 tactatcacg caggtaggca attcgttcgg caagtttaat caccacacag cggaaatcgt
    10021 ccaccatcgc caacaacatg cgacggatat tgtcgatttg cagatccgac acattattgg
    10081 cactaagctg gcggatattc tccatttcga gtacgccttt aactaagttt ttgatgtcgt
    10141 tactgaaatc ttcttttaat tgcaccaagt cgatcacatt gtgttttacc agaggaaaaa
    10201 gcattgcggc aactaagctg tcatcgtcca tattcaagcc gtgcaatact tcaaccatct
    10261 caatgccata ccacatcaga ctatagtcgg tatccagttt ttcctgtgca taactccacg
    10321 cattgtgaat ctgctcaaaa gtcacaggag acatattcag gcttgcacac caactcgaca
    10381 actcaaaatt attcggttca agttgatggg aataacgaat tgctaccata aggcctcctt
    10441 gtaaattttt gtggaaatta gaccgcttgt acagcttaaa atggagtttt attatacgtg
    10501 gaaattcaga aaaaatttac ccctaatcga aaatttaatc caagttatct tatcctcttt
    10561 actccttaag aggtagcaac cttgtgataa atcaaaccta tcaacacaat catttgcacg
    10621 acttcacgct cttgattaaa atacttgcgt ttttattttg atctttattt ttgtgggtag
    10681 caatgacaat tttagcttta ggaatcaacc ataaaaccgc ctctgtgggt ttaagagaga
    10741 aagtggcgtt tgtagatgac aaacgtaaac tggctcttga acaaatccaa acgagcggat
    10801 tggctgaaag cgtggtcatt ctctctacct gcaaccgcac cgagctctac ttccaccagc
    10861 ctaatatttc tccccgtgaa gagagcgagg aaaatatcca atggcgtgaa caatgtttcc
    10921 gctggtttgc ccaaattcat caacttgatg aaagcgagtt gcgtgaatgt ttatatttta
    10981 aacaaaattt agaagccgct aaccacttaa tgaaagtggc aagcggatta gattcactaa
    11041 ttttaggcga accacaaatt ttagggcagg ttaaacaagc ctatcaatat agcgaagatt
    11101 tctaccaaca tcagcaaaaa gcgatgtcca ccaagctatc acgcttgttc caacgcacct
    11161 ttgccaccgc aaaacgagta cgttccgaaa ccgaaatcgg cagccaagcg gtgtcagttg
    11221 cttatgcagc ttgcggttta gcccgtcaaa ttttcgataa ttttggcaag ttacgctttt
    11281 tgctggtagg ggcaggcgaa accattgaat tagtcgcccg ctatttaatt caacacgggg
    11341 cgaaaaatat aatgttggca aaccgcaccc atattcgggc ggaaatgttg gcggaaaaac
    11401 taaacgctcc aatgcaaatt ctgtcgttaa gtgctttgca actcggttta aaccaagctg
    11461 atgtagttat tagctccacc ggtagccctg ataccctaat cagtaaagaa atggtggaaa
    11521 ttgcgcaaaa acaacgccaa tttgacccac ttttgctgat tgatattgcc gttcctcgtg
    11581 atattgacga aaaagccggc gacttagagg gcgtttacgc ttatagtgtt gatgatttac
    11641 aaaatattat ccaacgcaat atggctcagc gtgaagaagc cgccaaacaa gccgctgaaa
    11701 tcgtcaaaga ggaaagcaaa gcattttttg aatggttaaa acaacagcag tctagtgatt
    11761 taatcaaacg ctatcgtcaa gatgcggagc aaacccgcca agaattgttg gagaaagccc
    11821 tacaagcaat cagtcaaggg caagacagcc aaaaagtatt aagtgagcta agctacaaac
    11881 tcaccaacca gttactacac gccccaaccc aagcgttaca agcaatggca aaaagtggca
    11941 actccaccgg cttacaaagt ttttcaagag cattacggct agaagaatga tgctcagcac
    12001 attcttttag gcatatttgc aaaaaattga acatttttaa ccgcttgcgg acgcacgccg
    12061 tgcgtccctc cccgtgttcc cgatcttctt ctaatttcaa cttccccaaa tttccgctat
    12121 aataagccaa tttttgcaac tattttgcaa ataaccggat atagaggata caaaatgact
    12181 cctgttgttg ccctagtggg cagacctaat gtcggcaaat cgactttatt taaccgttta
    12241 acccgtactc gagatgcctt agtagcagat ttccccggct taacccgaga ccgtaaatat
    12301 ggtcacgcta atattgccgg ctacgatttc attgtaatcg acaccggtgg tattgatggt
    12361 acagaggaag gcgtggaaga aaaaatggcg gaacaatctt tattggcgat tgaagaagcc
    12421 gatgtggtgc ttttcttggt tgatgcccga gccggattat tacctgccga tgtcggcatt
    12481 gctcaatatt tacgccaacg tgaaaaaacc acggtggtgg ttgccaataa aaccgatggt
    12541 attgatgccg actctcactg tgccgaattc tatcaattag gcttaggcga agtagaacaa
    12601 attgctgcag cacaagggcg tggggttacg cagcttatcg agcaagtgtt agctccttta
    12661 ggcgaacagc taaatgccga gcaatttaac caagaacaag cgggcgaaaa tgctaaaaat
    12721 gttgcaaatg aagaaacaga cgaatgggat accgaattcg actttgagaa cgaagaagat
    12781 gcggcattat tagatgaagc cttggcagaa gaagcagaag agtcgattga agataaaaat
    12841 atcaaaattg cgattgtcgg tcgtccgaat gttggtaaat caacactgac caaccgcatt
    12901 ttaggcgaag agcgtgtggt agtttatgat atgccaggaa caacccgtga ttctatttat
    12961 attccaatgg agcgtgacgg tcagcaatat accatcattg ataccgccgg tgtgcgtaaa
    13021 cgtggcaaag tgaatttagc ggttgagaaa ttctcggtaa ttaaaacctt gcaagccatt
    13081 caagatgcaa acgtggtgct attaactatt gaggcccgag aaggtatttc cgatcaggat
    13141 ttatcactac tcggctttat tctaaatgct ggtcgttcat tggtgattgt ggtaaacaaa
    13201 tgggacggct tgtcgcaaga tattaaagat caagtgaaat cagagttaga tcgccgttta
    13261 gattttattg attttgccag agtgcatttt atctcggcat tgcacggctc aggcgtgggg
    13321 aatttgtttg attcagtaaa agaagcctac gcttgtgcaa cgcaaaaaac ctcgacctca
    13381 atgctgactc gcattttgcg tatggctgct gatgaacacc aaccaccatt ggttaatggt
    13441 cgccgagtga aattaaaata tgctcacccg ggtggctaca acccaccaat tattgtgatt
    13501 cacggcaatc aggttgaaaa attagcggat tcttacaaac gttatttaag taattatttc
    13561 cgtaaaagtt taaaaattat cggctcgcca attcggattt tattccaaga aggcaataat
    13621 ccttttgccg gtaagaaaaa caaactgaca ccaagccaat tacgcaaacg taaacgtttg
    13681 atgaagttta ttaagaaaag taagaaataa tatctaacga tagcgcaagc atccacgctt
    13741 gtgctaaaac taataatggc acaagcgtgg acgcttgcgc catcatttaa cagagaatat
    13801 taactatgat gatgcaatac tctccaaaat ttaataatgc taaagtgctg gtgcttggcg
    13861 atgtaatgtt agaccgttac tggttcgggg caaccaatcg aatttcgcct gaagcccctg
    13921 tgccggtggt gaaagtacaa gatattgaag agcgtgccgg cggtgcggca aacgtggcga
    13981 tgaacatcgc cagccttggc gtaccggtaa cattacacgg cttaattggc gatgatgatg
    14041 ccgggcgtgc tttagataaa ttacttaatt cccaccagat ccaaaatcat tgtgtggtga
    14101 ttaattcgca cccaaccatc acaaaattgc ggattctttc ccgccatcag caattattgc
    14161 ggttggattt tgaagagggt tttcacaatg tagattctac cgccctactt gcaaaacttt
    14221 cgcaagaaat taccgcttac ggagcattaa ttctctcgga ttacggcaaa ggcacattgg
    14281 aatcggtgca acaaatgatc caaattgccc gcaatgctaa ggtgccggtg ctgatcgacc
    14341 cgaaaggcac agactttgaa cgctatcgtg gggcaacatt gcttacacca aatatgtcgg
    14401 aatttgaagc ggtggttggg cattgtaaag atgaggatga gattgtcagc aaagggttaa
    14461 aactgattgc cgactatgat ttatctgcac tattagttac ccgttcggaa aaaggaatga
    14521 ccttacttcg cccgaaccac gagccttatc atctgccgac ccaagccaaa gaggtttatg
    14581 atgtaaccgg tgcaggcgat accgtaatca gtgtattagc cactgcgatt gccgatggca
    14641 gagcctatga agaagcctgc tatttagcca atgctgccgc cggtgtagtc gtaggtaaat
    14701 tagggacttc aaccgtcagc ccggttgagc tggaaaatgc gattcaccaa cgcactgcca
    14761 ccggttttgg cgtggtttct gaagccgaat taaaagcgat tgtggaagaa gcgaaaaaac
    14821 gtggcgaaaa aatcgtgatg acgaacggtt gctttgatat tcttcacccc ggtcacgttt
    14881 cctatttgga aaacgcccgt aaattaggcg accgattaat tgtagccgtc aataccgatg
    14941 cttcggtaaa acgcctaaaa ggcgaagctc gcccgattaa tgatttagct gcccgtatgg
    15001 cagttttagc tggtttagcc tctgtagatt gggttgtgcc ttttgatgaa gatacaccac
    15061 aacgtttaat cagtgaaatc ctacctgatt tattggtaaa aggtggtgat tacaagccgg
    15121 aagagattgc cggcagccaa gaagtatggg caaacggcgg cgatgtgcga gtattgaact
    15181 ttgaaaacgg ctgttctacc actaatgtga tcaagaaaat tcaagcacta taatggtaat
    15241 aagcgaatgg cgagagaaaa aatcattatt gataccgagc aatttcagcg cacaatatct
    15301 cgtatttcac atcaaattat tgaaaaacac ggtgatttgc aagatgtagt gattgtcggc
    15361 atcaaacgtc gaggagctga aattgccgag ttaatccaaa aacgcattga agatttagct
    15421 caaacacgct tgccttatat ggcgttagat attacgttct accgtgatga cctagactta
    15481 atttatcaag atcccgtatt tatgggagcc gataatcagc taaatctgaa cggtaaaaaa
    15541 gtgattttgg ttgatgatgt tctgtttacc ggcagaacca ttcgggcggc acttgatgca
    15601 ctcttagatt ttggcagagc tgccagaatt gaactggtga tttttgtcga tagaggtcat
    15661 cgggaattgc ctatccgagc cgattatgtc ggaaaaaata ttccaacggc taaaaacgag
    15721 caaattcagg tgcaaacgct ctcgtatgat gggattaacc aagtggtctt agttcctgct
    15781 gccaataaag aaagtgctta aattaagtga accttttcgc taaacttatc tctaaggaaa
    15841 agttactgct taattacctc cattaggatt gttataaaaa tgaaattagt caaatcatta
    15901 tttgctgttg ccgttgcaac aatgagtctt acccaaaccg cccacgcatt tgaagaaaga
    15961 gtggtggcgt tagtgaatga tacccctatt atgcaaagcc aggttcaacg tgtgcttggc
    16021 aagaaaaagg cgacagaaac tgctcaacgt gcggctattg atcaagtgat tgatgatatg
    16081 ttggtgcaac aggcaatgaa agaagccggc gttaaagtca gcccagctgc ggtaaaccaa
    16141 gcggttgaaa atgtagcaat tcaaaacggc attacttacg gtcagttatt agatgcgtta
    16201 gattatcaag gtattacact tgaacaattc aaacgtaata ttgctcaaca aatggcaatg
    16261 gaacaagttc gccatatcag cattagcaaa tcgattcagg ttgcaccaca gcaagtgcaa
    16321 gctctggcga aagagttaat ggcgaaagat aaagcagcag gcaaattgaa aaccgtttct
    16381 ggcaaagagc atcgcattag tcatattttg ctcaaaacca acccgatttt aaatgatgct
    16441 caagccaaag caaaacttag cagcttaact actgatatta actcaggcaa aatcagcttt
    16501 gaagaagcgg caaaaaccca ttctgttgat tatgcctcag gggcagacgg tggagattta
    16561 ggttttaact tcttagaaat ttacgatccg gcatttgcga atgttgcatc aaaaatcaaa
    16621 ccaaaccaaa tttctgctcc gtttaaatcg caatttggtt ggcatatttt aaaagtcacc
    16681 gacactcgta acggagacag aaccgaagat gcttaccacc aacgtgctta tcagcaactg
    16741 gtgaacaagc aagccgaaga agcctctaaa gattgggtaa aagcgcttag aaaaaccgcc
    16801 aatattcaat atgtcggtca ataattaaaa tttttaagaa cctcgcataa tgcggggttc
    16861 ttttcttatt tcaaaaagga taacaatgag ttctacaaat tccaaaaaac atttaggtca
    16921 taccgctcgt aagcgtttcg ggcaaaactt tttgcacgat atgaacatta ttcacagcat
    16981 agtttcagcc attaacccga aaaacggaca atttttatta gaaatcggtc cgggtttagg
    17041 agcattaacc gagccggttg ccgaattggt agataaactc acggtggttg aaattgaccg
    17101 tgatttagca gagcgtttac gccaccaccc gtttttaaac caaaaactca ccattattga
    17161 gcaagatgcc ctacgcttta atttccgtga ctattttaac caactcaact tagacgaaga
    17221 ctcggtgcgt gtgtttggta acttacctta caacatttct acgcccttga tattccacct
    17281 gctgaccttt cacgacttaa ttcaagatat gcactttatg ttgcaaaaag aggtggtgaa
    17341 acgtttatgt gccgcgccaa acagtaaagc atacgggcgt ttaaccatta tggctcaata
    17401 ctattgccaa gtaattccgg tgctggaagt gccgccaacc gcctttaaac cggcaccaaa
    17461 agtcgattct gcggtagtgc gtttagtgcc ttataaccaa ctgccttatc cggcaaaaga
    17521 tgtgtattgg ctcaatcggg tcacgactca agcctttaac caacgccgta aaaccttacg
    17581 caatgctctt tcaaccctgt ttagtgcgga gcaactggac gccttaggcg ttgatttaac
    17641 cgcccgagcg gaaaacctta ccattgccga ttatgtgcgt ttggctaact ggctacacga
    17701 caacccgccg gcaattgata caaccgaaga attggttgat gaagattgct aatcaataaa
    17761 ttacaagcgg tcatttttct accaagattt gcaaatcttt agtgaaaaat ggccgcttgt
    17821 ttaaatcagc tttacttgtt ttgctgttac ttagttttga tgttacttgg tgccgaaaat
    17881 tttatcccct gcatcgccta agcctggaat gatatagccg ttttcgttta agtgactatc
    17941 gattgaggcg gtgtagagtt caacatctgg gtgggcggct tctaatactt taatcccctc
    18001 tggagcggca actaacacta gcactttaat ctgcttacag cctgcttttt tcaggaggtc
    18061 aatggttgct accattgagc caccggttgc aagcattggg tcggtgataa tggctaaacg
    18121 ctcatcaaca tcgttggcta gtttggagaa atacggcacg ggctttaagg tttcttcgtc
    18181 acgataaatc ccaaccacac taattctggc acttggaata tgctctaaca caccgtccat
    18241 catacctaag ccagcacgca gaatcggcac aacagtcact tttttgcctt taattcgctc
    18301 aaccgcaatt ttctctccgc tccagccatt gatctccaca ctttccattt ccagatcttt
    18361 ggttgcttcg taagtaagca gactaccaat ttcattcgct agctcacgga aatctttggt
    18421 gctgatttcc gcttcacgca ttaagcccaa tttatgcttt acaagtgggt gttttacttc
    18481 aacaattttc attttaagct ccttaattag tgtaatttaa gccttattca cctttgctaa
    18541 ttcttcgtct cttaacactc ggcgaagaat tttgccgaca ttactttttg gtaattcgtc
    18601 acggaattcg atgtctcttg gaattttgta gccggttaag aattgacgac aataggttct
    18661 caattcatct cgagttaaac tttcatcttt tttggttaca aaaattttaa tgctttcgcc
    18721 ggaagcctca ctcggcacac caatcgccac tacttcattc acttttgggt tttgggaaat
    18781 cacttcttca atttcggttg ggtacacatt aaaaccggag acaataatca tatctttttt
    18841 acgatcaaca atgcgtaagt tcagatcatc ccccattacc acaatgtcac cggttgccat
    18901 ccaaccatct tgtagcactt gtgccgtttc atcaggacgg ttccaatagc cttgcattac
    18961 ttgcggccct ttcaccacca gctcgccccg ttcgccgagt ggtacttctt tgccttcatc
    19021 atccacaata cgaatgtcag tatttggcac tggcacgcca atagagccgg aatattccac
    19081 cgaatcgcca cgggttgcac taatcagcgg agaacattct gtcattccat aaccttcgat
    19141 aatatgtacg ccggttaaat cgtgccagcg ttttgccacg ctagattgga tcgctgcacc
    19201 gccacctaca cttaatttta ggtgtgaaaa atcaacctct ttaaaacttt cgtgattaag
    19261 taatgcatta aacaatgtat ttaccccagt aatcactgaa actttgtact tttttaattc
    19321 tttaataaag cctggaatat cgcgcggatt agtaattaat aatccggtaa gtcctaattc
    19381 gataaagagc aagcaattca tcgaaagtgc taagacgtga tacagcggta aaggtaccaa
    19441 tccaatcata ttggcagaat tacccaacaa tggctcaaca atccattttg cctgcatcat
    19501 attagcaatt aagttttgat gagtcagcat tgcccctttc gctacacctg tagtaccgcc
    19561 agtgtattgt aaaaaggcga gatcttggct gacaatattc ggttttacat attgacgctg
    19621 tttgccaatg cttaaggctt cacggaagct gaccgcatgt ggcaatttat atttcggcac
    19681 taattttttg atgtatttca ccacaaaatt gactaaggtg cgtttgccga atgaaagttg
    19741 gtcgcccatt cgggtcaaaa taacgtgctt aatctcagta ttaaagacaa ttttttctaa
    19801 ggtagccgcg aagttcgaga ctatcacaat cgctttcgca ccactgtcat ttaattgatg
    19861 ttctaattca cgcggcgtat aaagcgggtt gacattcacc accacaagcc cggcacgtaa
    19921 tgcgccaaat aaagcgatcg gatattgcaa taaattcggc atcatcaatg cgattcgatc
    19981 accttttttc aggcgtaatt cattttgcaa ataagcggca aacgagcggc tacgttcttc
    20041 caatttacgg aacgttaaaa cctgccccat attaatataa gctggaatat cagggtggcg
    20101 ttgtatcgct gcttcaaaca tttccactaa agattcatat tgatctgttt caatcgtttt
    20161 tggtgaataa ggcggataat tatttagcca tattttttcc attatagtct cctaaaacct
    20221 tacctaaaaa gataggtgaa aaatttgctt gtttgctgtg tttatgaatc aattttctta
    20281 cagcccagaa tgttatacct gttgaaagca acattataaa taaaacaata agctcatttg
    20341 caaaaaattg cgaaaatccg accgctgtca tcacaagaac cagcagagga atgccataaa
    20401 ttaaaaacac gcttttgagc aagatatttt cagctaaccc tagttcaacc ttatcgccta
    20461 cttttagggg ttcatctacc tcaatacgaa aacgagggtc aattttttca cctgctaatg
    20521 ctgataatgc tttgctgcca caagcagact gagctacaca gccaccacag ctacttttag
    20581 cataacattg tacaatagcc acaccattct gatattccac caccgtagcc tgttcgatca
    20641 tcatggctga gctccttcct taaaaccaat attgttcata atttgcttag ccgattgcaa
    20701 cggcacatca ccaataatca caatatctct atcattaatc gtttgattta aaatcgttaa
    20761 tttaccttgt tgccaagcgt actcattaaa actcacgcct tggctaggca taatataaat
    20821 agttaatgta gataaaccat cactatatac tctgctatct acatactcac tttccacttg
    20881 atatgtcgca cctgtgactg tttgttgctg aattaaccta aaccctgtcg gcaaccactt
    20941 cacctgccaa ccatcagact taggaaattc ttcttttttc actgtcgtta atgttggtaa
    21001 cattagtgat tctattacat ttgcaatcct atccaattct ggagattgat aaagttgcaa
    21061 aactctgaat tcttctaata ccaaattatc catattcaag acttggcttt taagtaataa
    21121 atgtgtttct tcatcaatcc atagtatata ggcatatctt aaagtatcat ttggcttcat
    21181 acgaattacc tttgtaattc ggtcagaaat acgatcttta ccagcatcta aaaaggcata
    21241 accttttaaa tttgcataat ctgtgtaaag tacattaggg aggttatcta aaatctgtga
    21301 actatttaaa ctaaaaggac gaaaattata ccccaaatag ctgaccttgt tattttttaa
    21361 aataatttct tctcggctgt gatctaaatt cagtaattgg gcatattctt tattatgggt
    21421 aaaagcatga cgtaaacgga aagattctgt atcacttccc tgttgaagaa tataaactaa
    21481 ttcataagtg gattttttat gtgcttctga catagccgtt aaatatgcta atggtgtttt
    21541 aatagttgat tctgcccaag caaatgtata gcaggcagaa ataacccaaa acaacaataa
    21601 gtattttttt atcttaaaaa gcatatttat tctcaagcca aattaactta ggttatttta
    21661 gcaaaaaatt ttcactattt cgctacttgt tggttatttc ttattttttc gctacattta
    21721 catacaaaaa gccacataat tatggataaa ttatgtggct ttcagtaact tattttacct
    21781 attatttttg tatatttggc tctgattctg tattggaaga agtttgtgct ttttgctttt
    21841 cttcctcaga taaggttaaa tttttaacgt tattagtacg gcgttgtaac tcatggtttt
    21901 ctaataacgc attaatctta cgctgttgaa gctctaactg ttcttctgtt ggttgatctt
    21961 gaactggcgc attataactt accgcttcaa ctgaattgct aaatggcaat gtttgtaata
    22021 ctggttgttg cgtttgagct atttcatcac tcgcattcat tgaattaacc cctaataccg
    22081 caactaagca cactgaagct gcaataccgg cttgcataat tggagttccc caacgcttga
    22141 gcttgagcaa taagccttta ggtttctcta catttgcttg agattcaatt tcttcatttt
    22201 ccagtaatgc ttccatttta gcagagaaat ctctccctaa aatgatctca tcaccttgca
    22261 tcacactacg aatagtgtga taacttgccc atttttgctg taattcaggg ctgttagtta
    22321 atgtttctac aaatgctgta tcaacatttt gcccatccat ataagctgaa aggcgttcat
    22381 tttgttgagt gatgcgttct tgcataattg actccaatga tttaaatctc ttctaaaata
    22441 atctttctat ctattgcata agtggcttga ttttagcatc aatcgcttcc cttgctcgga
    22501 aaatacggga acgtacagta ccaaccggac attccatcac ttctgcgatt tcttcgtaac
    22561 ttagcccttc caattctctt aaacgaatgg cggttttaag ctcatcaggt aaattttcaa
    22621 tcgtatcaaa cacgactttc tttaattcct cggataatat caaattctct ggcgtatcac
    22681 tttcacgaag ttgcgcgcct acatcataac tttcagcgtc ttcggcaaga atatcttctt
    22741 ttggcggtct tctgcctaaa gaggttaaat gatttttcgc agtattcact gcaatgcgat
    22801 aaagccacgt ataaaaagca ctttcgccac ggaaagactc taaagaacga taggctttaa
    22861 taaaagattc ttgcacaatg tccggaatat catctcttgc aacataacga gtcagcaaac
    22921 cggctactct attttgataa cgtacaacaa gtaaattaaa tgctttttta tcaccttttt
    22981 gtgctttttc gactaattct tggtcggtga tctgttcgct caactgcgga ctctcctaaa
    23041 tatcaatatg tcattttcca ttgcacactt tgttagtgtg tgctttatga caaaagttca
    23101 aaaaatttga aaaattgtgt aattttttac attcctagat aaaacctact taataaacta
    23161 agcaagcggt cggattttag cgaaattttg caaaaatttc aaaaaatccg accgcttgtc
    23221 tatgttatgc tttcgctcta taagttattt cttcgctttt aaatctgcca ctttttgtga
    23281 acggtaaatc gcattaatgg cgtgaattaa agctcgggct gaagattcca caatatcggt
    23341 tgccaaaccc acaccgtgga attttcgacc ttcatattcc actacaatat ccacttgccc
    23401 taatgcttct gctccttcgc ctttcgcagt cagattatag tgcgacattt ttagctccat
    23461 tcccacaatg ttcataatgg cattgtaagt tgcctcaact ggaccatttc ccccttgaga
    23521 tgtagcactt tgacgaacgc cgtctaattc cacctgtaca aaagccgaag ccggtaaacc
    23581 gctgattagt tgggtggtaa ttacatctaa ttttaagcgg tcttcatcgc cttgctgcat
    23641 atcaatgaag gcaagagctt ctaagtcata atcaaacact tgcccttttt tatcagcaag
    23701 ttgcaagaag gcctcataaa gtttatctaa atcgtaatcc gtttccgtat aacccatatc
    23761 agccatatgc cctttcaccg ctgctctacc tgaacgggca gttaaattca gcttctcttt
    23821 tttcaagccg atggtttccg gcgacataat ttcataagta tttttatttt tcagcatacc
    23881 gtcttggtga atacctgaag agtgagcaaa ggcattgcta ccgacaatcg ctttgttcgg
    23941 ctgaatcggc atattgcaaa gctggctgac catttggctg acacggtgaa tttcttgggt
    24001 attaatgcgg gtatcaaccc ccataaattc ttggcgggtt ttaattgcca ttaccacttc
    24061 ttcaagagcg gtgttaccgg cacgttcgcc aataccgttg atagtacact caatctgtct
    24121 cgctccgttt tgcaccgctg tcaatgagtt ggcggtagcc atacctaaat cgttatggca
    24181 gtgaacagag acaatcgctt tatcgatatt cggaacacgg ttcatcactt ggtggataat
    24241 attgccgtat tcattcggta aacagaaacc gactgtatcc ggaatattca ctgtggttgc
    24301 accggcatta atggcagctt ctacaatgcg gcagatgtta tcaattccag tacgcccagc
    24361 atcttcacag gaaaactcaa catcatcagt ataatttctg gcgcgtttta ccgctgcaac
    24421 cgccatttcg actacatcat caaatgaacg ttttaattta gcctcaacgt gtaatgccga
    24481 gctggcaata aaggtatgga tacggaatgc ttctgctact tttaaggctt cataagctgc
    24541 atcaatgtct tttgcaaccg ctcgggaaag cgccgccacc cggctgtttt tgatatgacg
    24601 agcgatggtt tgtactgatt caaaatcgcc cgctgaagaa actggaaaac cgacttccat
    24661 cacatcaacc cctaaacgtt ctaaagcaag ggcaatttgc aatttttctt ttacggttaa
    24721 acttgctttt aatgattgct caccatcacg taaagtcgta tcaaaaataa taatgttatt
    24781 gttgctcata gaagcctctt tttaggtgtt tttatttgat aaaaaaagcc cgcattttaa
    24841 ggtgcgggca agaatgtgga tagtccattt actttttcca atcaatcttt atcctcgcac
    24901 aaaatacgat aacagagata atcggagtaa ggtaaatttt tccatgttgt gttgtatgtt
    24961 tatgtttgca ttgttattca gtagttgagg tgtatattat ccttatccaa atcaatgtca
    25021 atagcatttt tctcttcacg caaccgttta ccagcccatt aatt
//
LOCUS       DANLTI010000021        24957 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.021, whole genome shotgun sequence.
ACCESSION   DANLTI010000021 DANLTI010000000
VERSION     DANLTI010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24957
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.021"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..663)
                     /locus_tag="PXB09_000678"
     CDS             complement(<1..663)
                     /locus_tag="PXB09_000678"
                     /inference="COORDINATES: protein motif:HMM:NF012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5232823.1"
                     /translation="MNELRLLRQKKLKRLIDEVSEGNIADFARKIGKEPSYVARMLYP
                     SDKAGAKPIGEKMALHICHKFVLPLDWFNRDDDGEFIQINNGEEDNIILSVLNIQASA
                     GIGAKNGDVMEVIREIKFNPEQFYNLFRGITPEHIELISVKGDSMEPTFSHGDLLFVD
                     VTIQEYDGDGVYVFTCDDYIFVKRIQKTGRHFTILSDNDRYKPWQLDQEIYIHGKVKV
                     HQS"
     gene            792..1025
                     /locus_tag="PXB09_000679"
     CDS             792..1025
                     /locus_tag="PXB09_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL5232824.1"
                     /translation="MEELKAYLNSLTTKEQESFALRCNTTVGYLRKSISRNSRLGAEI
                     CVAIERETKGLVTRKHLIEDWHLRWPELANDKQ"
     gene            1182..1424
                     /locus_tag="PXB09_000680"
     CDS             1182..1424
                     /locus_tag="PXB09_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5232825.1"
                     /translation="MYGINLNLNEKSSQTQNARILAHLQNGGRITSLSALDDFGCLRL
                     SARIKDLRDRGHDIQSVFITVPNGKKVKQYFMECAK"
     gene            1421..1772
                     /locus_tag="PXB09_000681"
                     /pseudo
     CDS             1421..1772
                     /locus_tag="PXB09_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596652.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1910..2194
                     /locus_tag="PXB09_000682"
     CDS             1910..2194
                     /locus_tag="PXB09_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232826.1"
                     /translation="MLLEQFGITGKLAEDFIVHRKAKKAPITETALNGYQREADKAKI
                     PIQKAVEIAIERGWTGFKADWQWQDDQPKHRPKDNMRAEWNNPEAWAEVF"
     gene            2194..2841
                     /locus_tag="PXB09_000683"
     CDS             2194..2841
                     /locus_tag="PXB09_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5232827.1"
                     /translation="MSLQKTEQNRPLAVLGEQQGKLSGEVESLVDRIFDQLLASCPSI
                     QYWSEKQVATAKKQWILGFAENGIRTVEQVRQGMKALRAKTDDFVPSIGKFIQWCNTI
                     DYHELGLPDLEQLLKLLDRSLRFDFIEIQKLKFKSNAEYWLITDLYARNKKYSWKDET
                     LRNQAEKALVAMAKRIMSGEQIPPPKPLIEEKKKVPIDPRIQRILDEKKQAGAMQ"
     gene            2838..3410
                     /locus_tag="PXB09_000684"
     CDS             2838..3410
                     /locus_tag="PXB09_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5232828.1"
                     /translation="MTDFDKDTYQTPKYFRNWLNHRYAWFHIDGCSNGKNALYSYWIG
                     KAAEGLDEDTLSGQIAEDFLAENLLDVILERVADWGELLRIFVNPPYSNPLPFVQRAA
                     ELKKAGHIVVMLLPADKSTRWYQVIQENASEVIDIIGGRINFINPLTGEEVKGNNKGS
                     MVAVFDPFVEGIVTRQMPLDKIKELGGYEK"
     gene            3529..3981
                     /locus_tag="PXB09_000685"
     CDS             3529..3981
                     /locus_tag="PXB09_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL5232829.1"
                     /translation="MAKYQMMKLPGGILSPLNDEEAERLKSFQNGEQYEIEIKRQRNP
                     AFHRKVFAFFNFCFDCWSGSHSDWEFQDPTAQFDTFRKHLTVMAGFYVQTWNLKGQVR
                     IEAKSLSYANMEQDEFEQAYKALINAAIKHVFNNTKDENTINQLYSFF"
     gene            4031..4243
                     /locus_tag="PXB09_000686"
     CDS             4031..4243
                     /locus_tag="PXB09_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232830.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLISLSILTLRYIGYLLIYPLAFFVA
                     VGSFIVIGQWKYQECLDDFKSDFNPI"
     gene            4620..4904
                     /locus_tag="PXB09_000687"
     CDS             4620..4904
                     /locus_tag="PXB09_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005672808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HDL5232831.1"
                     /translation="MANLRKEAKGRECQVRLPGICNHNPETVVLAHYRMAGLNGVGMK
                     PDDIFGAWACSSCHDECDRRTRKLEADYVRQAHAEGVFRTQAILRREGKL"
     gene            4901..5269
                     /locus_tag="PXB09_000688"
     CDS             4901..5269
                     /locus_tag="PXB09_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDL5232832.1"
                     /translation="MSDWLEIALPYPPSVNHYWKHTRNGRHYISDKGKAFRAEVVKIC
                     KMFDPFKGAVQTVLQIYYPDKRKRDPDNLEKALWDALKIGGLIEEDDNQILVDKRTIT
                     AGFKKGGMVVLKIKAVGNAN"
     gene            5259..5624
                     /locus_tag="PXB09_000689"
     CDS             5259..5624
                     /locus_tag="PXB09_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232833.1"
                     /translation="MQIDVKGVLNLWGGYVRFTDCKGYPTMQAFMRESPQERTKQRYL
                     ARLDDDTLEKVDRQMRKLQANDKRQFDVLFYKYAVGLENKQVWQKLSLSKTSYHTELL
                     LAERFMEGALAGSEIRLLL"
     gene            complement(5592..5786)
                     /locus_tag="PXB09_000690"
     CDS             complement(5592..5786)
                     /locus_tag="PXB09_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232834.1"
                     /translation="MALSRTEIVNRSNAKRGIKLKAFKLHESTIAQIEQLAQQLNIPQ
                     NQLIKLAVEKLQEQTNFTTG"
     gene            6213..6288
                     /locus_tag="PXB09_000691"
     tRNA            6213..6288
                     /locus_tag="PXB09_000691"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6246..6248,aa:Trp,seq:cca)
     gene            complement(6303..6881)
                     /locus_tag="PXB09_000692"
     CDS             complement(6303..6881)
                     /locus_tag="PXB09_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232835.1"
                     /translation="MIEFDQIDDSFYHFPFRPRPGDTSSDTATPCIGGVDLVSNPEKV
                     ELIPEAAHSPMLKKLLTDLNTPNSKLLTLGCAYWAHKDNRDTSYAYLEFSFREHSVAT
                     NLEFIRSIDEQFEQFLQENKKQLSIEFSVPEQAFDIVSQALFWSIRPFSYFGSEERIL
                     IYFQAGSPRHQDLEIFLDLLHRFLTEYLVVPA"
     gene            7000..7344
                     /locus_tag="PXB09_000693"
     CDS             7000..7344
                     /locus_tag="PXB09_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin, lambda family"
                     /protein_id="HDL5232836.1"
                     /translation="MPEKNPDIYTQAWNYLVMFLSNHNGWICGVIIAFFTSITKSFLY
                     GKTDTPKRVLAEAILCSVIAGSMRPILIYLNADVSLITPIGAGIGLLGTSAIRQMILK
                     FLNKKAGGENVD"
     gene            7334..7927
                     /locus_tag="PXB09_000694"
     CDS             7334..7927
                     /locus_tag="PXB09_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 19 protein"
                     /protein_id="HDL5232837.1"
                     /translation="MWISESKFKQVFPNAVSGIYSIIDKHIEKAGCKTKEQQAMFLAQ
                     CGVECAGYSVFEENLNYSATALLRTFPKYFSQHNVVLYARDKRAIANRVYANRMGNGN
                     EQSGDGWKYRGRGLIQITGKANYIEFAKWEGLPSLVTDPDQITKNLALTVQVAVWYWV
                     SRKLSEFSDILTVTKKINGGTHGLTQRTAYYKKLMAD"
     gene            7928..8257
                     /locus_tag="PXB09_000695"
     CDS             7928..8257
                     /locus_tag="PXB09_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL5232838.1"
                     /translation="MIKYIYLAATVMILGLCGWIWHQSKQIDGLRAENQTQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLH"
     gene            8223..8456
                     /locus_tag="PXB09_000696"
     CDS             8223..8456
                     /locus_tag="PXB09_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232839.1"
                     /translation="MVLLIALSGCTSKTIVSTEYLYPPAAYLVPCERTAFSGKTYGDT
                     VDYLIKVMGERDLCASQIDRIREWQAQTKQGFK"
     gene            8723..9199
                     /locus_tag="PXB09_000697"
     CDS             8723..9199
                     /locus_tag="PXB09_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1441 family protein"
                     /protein_id="HDL5232840.1"
                     /translation="MDNLFDLKLNINQIAELTGLHRQTVSQRVAGLNPALGSNSKLKL
                     YALRDLILTGLAEKMSADVDSLSPADRRAWFQSENERLKFEKEIGELIPASEVALEMS
                     ALAKTVVQALETLPDILERDCGLQPKDLIRVQQVTDDVRDQMALHIQEVTTDTENE"
     gene            9199..11310
                     /locus_tag="PXB09_000698"
     CDS             9199..11310
                     /locus_tag="PXB09_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDL5232841.1"
                     /translation="MFASAKEIRRDIANAIKAPRRMRVSEAVAEYMRVPLGGGNSVKW
                     DKHTAAYMLEPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYSIICDPSDFLLVQL
                     TQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLS
                     SSDYKYVALTDYDRWPEDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDLKHI
                     PKSTHEAPPTTGILSLYNRGDRRRFYWQCPDCSEYFEPSMANMVGYREDSDFVKASEN
                     ARLQCPHCQTLIAPELKRELNIKGVWLKEGQKIDASGQISGESRKSRIASFWLEGPAA
                     AYQTWAQLTYKLLNAEHEYEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERR
                     EEVEEKTVPAQCRFIVAAVDVQGGKNRRFVVQMVGYGENGERWLIDRYNISHTLPDSD
                     GVIEKIDPRIPDDWYILISDVLEKRYPLAHNPNHFMPILAMAVDSGGEDGVTDNAYQF
                     WRKCRRDGYAKRVYLVKGDSTKRQKLITKTYPDNTARSDRHSSARGDVPLYLLQTDYL
                     KDRINNALFRDTVGANYIHFPDWLGEWFFNELTYEERGADGKWRKPGKGNNEAFDLFC
                     YAHAIAILRGYERIKWGDENDVPSWAKLPDINPNIIRETPRTAEQAVEIEEKSEKPQP
                     KPTKAKSSWLSGGGRKTGGWL"
     gene            11307..11531
                     /locus_tag="PXB09_000699"
     CDS             11307..11531
                     /locus_tag="PXB09_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232842.1"
                     /translation="MSLYTIDELKQKIRTLDEKIETAQSQVSFNGRSVSYQVAELTKQ
                     RDRYQTMLDEQLAQSGQRTKQHRIKYARFI"
     gene            11531..13030
                     /locus_tag="PXB09_000700"
     CDS             11531..13030
                     /locus_tag="PXB09_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL5232843.1"
                     /translation="MNFLEKTIATLSPKWAANRSRNRYVLNAYEAAQPSRTHKASRES
                     KGANSTVRQSAVSLREQARALDQNHDIVIGILDKMEERVIGSKGIHIEPQPLTLAGEV
                     HEELAGQIRKLWAEWSVKPDVTGLYTRPLLERMLLRTWLRDGEVFVQLVKGKVAGLEH
                     GSQVAFSLEALEPDFVPMQSDEAKNGLVQGVFLNAWRKPTAYQVYLDNPQESNGMYGK
                     VKTVPADNMLHLAFRKRLHQIRGVSMLHGVIVRLADLKEYEESERVAARIAAAMTMYI
                     KKGDAALYDDDSNSDGERLFDIAPGAVIDDLKPGEDIGLINSNRPNVNLETFRNGQLR
                     ATAAGTRSSYSSIARDYNGTYSAQRQELVESFEGYAVLQDAFVAAISRPIYREWLKMA
                     IASQAIKLPPDIDQNSLFNAVYSGPVMPWIDPIKEANAWKERIKGGLATEGQAIRASG
                     NNPAEVKRQRIVEIKENQAEGLKFDTDLTNYGGQDKSFSNQKDEINEDE"
     gene            13042..15003
                     /locus_tag="PXB09_000701"
     CDS             13042..15003
                     /locus_tag="PXB09_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HDL5232844.1"
                     /translation="MKTWFNIQAKANDTAEISIFDEIGFWGVTAQQFAKDLKALGNNL
                     KQINLHIHSPGGDVFDGIAIYNLLKNHPANKTVYIDGLAASMASVIAMAGDEIIMPEN
                     AMMMIHKPWGIQGGDADDMRKYADLLDKVESTLIMAYVAKTGKYETDLAEMLKEETWL
                     TGKECVEQGFADKLAEPLVAMACIQSKKLEDYTKMPDKIKNMLFAPQGNAGANPKHEQ
                     PQTPPQAGENPQNVAKPDAMVALAQRNATIKATFAAFGTQFDGLLAECLADVSMTAEQ
                     AKDKLLAKLGENTTPSVPQNHIHAGNGNIVGDSVKQSLMARAGQDTDKTNARDNAYNA
                     MTLRELARASLVDRGVGIAGYTPMQMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAT
                     ENYEQFTTRGTLTDFRPAKRVGLGEFGYLPEVGEGEEYTYGTIGDEGASVALATYGQL
                     FSITRQAIINDDMHLLTKIPEKMGAAAKATITKLVFALITGNATAQDGKKLFDATHKN
                     SLTGAALNVENIDKAIQLMNGFVNSRGEPLSIEPEFMLLPTSLHTKAKQILGSSSVEG
                     ADINSGIINPIRDIVSPIKSPRLQIADPKSWYLLNKEAIEVSYLDGVDSPYIEQQHGF
                     TVDGVSTKVRIDAGVNVIDYRGVVKVTNA"
     gene            15077..15400
                     /locus_tag="PXB09_000702"
     CDS             15077..15400
                     /locus_tag="PXB09_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HDL5232845.1"
                     /translation="MAKNYIQDGNTVRLTATKAITSGDVIVAEDLIAIAVSDAAKNDA
                     VVGLTTGVFSVKAKQADDIKQGAVLYWSETEGATLTAGSNKRLGIAWKDSGTSSNQVD
                     VKINV"
     gene            15393..15695
                     /locus_tag="PXB09_000703"
     CDS             15393..15695
                     /locus_tag="PXB09_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232846.1"
                     /translation="MSSPFEQAIAAADQTIQQTMMSEWLIGGKPYPATFDEAPAIFNG
                     LHSTDDRAIHGTERTLTLFRASGYKPRLDDRVSGNGKKYLVKSYHFVDQLIVLQLE"
     gene            15699..16223
                     /locus_tag="PXB09_000704"
     CDS             15699..16223
                     /locus_tag="PXB09_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232847.1"
                     /translation="MGSQVTGLKELQASLKKIARQTVPKAAAQAIRTVGRQAMNKAVK
                     SVAAEIGVNQKTIKGRAKMTAKPTPSRLQATIKVNRSHMPMIRVLERKSNRLSPTKGS
                     IRVGKHTVQRGFRQRLANGRTHIMYRQGRKRYGIDVAKVPLSQPLTQAFDRELKNYPE
                     QVQAELAKQIAGKL"
     gene            16220..16615
                     /locus_tag="PXB09_000705"
     CDS             16220..16615
                     /locus_tag="PXB09_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232848.1"
                     /translation="MKIHTKIRKEVLELLQTKLPEIDNFYNGLPTFIDIEEEQLAVSV
                     YLDDISLQEITVCNNQWDAKLNITIHLKSTESAEDELDEWAEKIREIIDDYPEFEHLE
                     SVALSQYQYEQDQNQRTWHMATLIFDVEY"
     gene            16643..17284
                     /locus_tag="PXB09_000706"
     CDS             16643..17284
                     /locus_tag="PXB09_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232849.1"
                     /translation="MAKTTKVQGTKFRISVGREAQKAITAINLNTATLTIASSGYKKG
                     DAIELTGCGQLDGIYPVLSVTTDQVKLCEEVNWTGKDLPANYTKAKAALVQYSEQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPTTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            17368..17769
                     /locus_tag="PXB09_000707"
     CDS             17368..17769
                     /locus_tag="PXB09_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232850.1"
                     /translation="MTLREKLLANKPKLQPIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGVLLFNPLDINDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            17814..18044
                     /locus_tag="PXB09_000708"
     CDS             17814..18044
                     /locus_tag="PXB09_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL5232851.1"
                     /translation="MPERHFAEYRLFYQEQPFGLWRDDYRTAQLAHLTAMFNRDPKGK
                     APKLAEFMPFFNRTDEVEEIEDDGVADYLAKR"
     gene            18107..18334
                     /locus_tag="PXB09_000709"
     CDS             18107..18334
                     /locus_tag="PXB09_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232852.1"
                     /translation="MFEALDRFMINTIKIAIIVFLVACIFISMPNWWIASILVLFPTA
                     YLLDKYWWRNTEMYRRKMDKLVKEMKNNRQI"
     gene            18388..21939
                     /locus_tag="PXB09_000710"
     CDS             18388..21939
                     /locus_tag="PXB09_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5232853.1"
                     /translation="MSSSNRLTITLDVENSKLLAGFAQSDTVANKFARSFIVNMDQAQ
                     QKARQFADRSTKYLKNIEQAANNLNSSVSKERFWQIANRLQFPTSKVISYANSYTELG
                     NKLKLVTESESQHARAMAAVYDISLKTAQSTQATSSVYQTFAQNAKQLGISQNDVAKL
                     TETVAKSVAISGASSATASNALVQFSQSLLMGKLKAQEFNSLMTQTPSVIQAIAKGLG
                     ITTAELKAMVDNGEMSAEKMIEGLKKAESYVNGQYAKTTTTISGAMQNLSTAAEKWVG
                     EMDSTVGASQKAVAVLNALNAHFDTFAKTALVAGGAFVLFKGYMSVRPFIEARAAIYE
                     NRKAIIAENQARQQTIATRQQELVVLSQQTALKLEQTLQTYNQNKAELEAIAVKQQKI
                     TKEREEIAVAIQAAATRTERLALSAELQALDQKEIALGQQKIAVERQQIATKQALKVA
                     YAENAVAQSAMNAGMVTATTTTRAMNGVLAAARAELNLLKAAALSNPLMTLAMVATTA
                     GTALWGFFESQKAAREEALRYADSLDSVRANIEKMTKAQTDAEMVKLSRSIKEQETAL
                     ASLKQRQAELTREIEQGATVLDDAFGAGVRFEKSAKELAKAQEELKLVTADVEKAQNT
                     LNASLEAQEALQAHVPIANLREEFVKLYPHIDESQIKVDGLNIAIGNFTVKSPEMVIA
                     ANNIANALGGVAGEAMRAAILVANLSSMKLDANGAAIIDPKHLEKIEQIERNNAIASA
                     KGKDKIALQVKDALIKSGMKEGDAGYERLKAAYEQQFTLQNAPKRGGKPKKTKAERSA
                     ESYQNQVAEMTNRLSGLKIDKEDLVKYGGISQYQEVRKLTEDIALNAEKYKNYGTEGV
                     AKLKELAAKIDSEQQLLDIEQFQVDHDKKLEAMQFELDLLGKTRTEKELLQFNNQLDL
                     EAERLKINMTKENIALLDQKIAKIKEEYELHQKKQEETRASVMMGIKEGWNNIETDVS
                     NVAANVANITQNTFDGMADSLTNFVMTGKADFRSFANSILSDLSKMIIKMMLFNAIKQ
                     GATMLFGYQGPTTTVNGNAVYGLGTWATGGYTGNGGKYTPAGIVHKGEYVITKEATSR
                     LGLDYLNYLNYGRRGFASGGGVAVPRVPSSSYQPKSAQSSISVQVINNGEPVDAKVSQ
                     KQQGEQTQITVELMRKIARQEANGMIQNNFRAGGVFA"
     gene            21939..22268
                     /locus_tag="PXB09_000711"
     CDS             21939..22268
                     /locus_tag="PXB09_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5232854.1"
                     /translation="METLQWCVRTDLAVENTPEIMEVKFGDGYTQRSPKGLNNLLRAY
                     TGTIKVKKGEHLAVEAFFAKHRGVSPFYFKDPYTQQNKKVVCSSWPAKMVGLNHWEFS
                     VTFKEVP"
     gene            22268..22984
                     /locus_tag="PXB09_000712"
     CDS             22268..22984
                     /locus_tag="PXB09_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5232855.1"
                     /translation="MPVSISNQMKLDLAKLEQNAMLDLYEVDLRTLKDKSGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            22988..23719
                     /locus_tag="PXB09_000713"
     CDS             22988..23719
                     /locus_tag="PXB09_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5232856.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPILSVLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFDRQDDWWHTGQNLYLDNIQG
                     QGFERVGTPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLADKLDFDGILNDIAVNN"
     gene            23988..24578
                     /locus_tag="PXB09_000714"
     CDS             23988..24578
                     /locus_tag="PXB09_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5232857.1"
                     /translation="MITVKFYGHLRKFGTDFKLEVKDTAEAIRALCTQIRGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETMTVEV"
     gene            24581..>24957
                     /locus_tag="PXB09_000715"
     CDS             24581..>24957
                     /locus_tag="PXB09_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232858.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTKIQNDDDSYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGA
                     IVRTVTDERISRLRLTLGVRSLF"
BASE COUNT         7754 a         4972 c         5774 g         6457 t
ORIGIN      
        1 gctttggtgg actttaactt tgccgtgaat ataaatttct tgatctaatt gccaaggttt
       61 atagcggtca ttatcagata aaatagtaaa gtgtctgcct gttttttgaa tcctttttac
      121 aaaaatatag tcatcgcaag taaaaacata cacaccatcg ccatcgtatt cttggatagt
      181 tacatcaaca aaaagcaaat caccgtgtga gaatgttggc tccatagaat cgccttttac
      241 actgatcagc tcgatatgtt caggcgtaat acctctaaat aggttataaa attgttctgg
      301 attgaattta atttctctaa tgacttccat cacatcaccg ttttttgctc ctataccggc
      361 cgatgcttga atattcaata cacttaagat gatattatct tcctcaccat tgttgatttg
      421 aataaattcg ccgtcatcat ctcgattaaa ccaatcaagg ggtagcacaa atttatggca
      481 aatatggagt gccatttttt caccaatagg cttagctcca gctttatcgg acggatacaa
      541 cattcttgct acatagctag gctctttacc tatttttctt gcaaagtcag caatatttcc
      601 ctcactcact tcatcaatta ggcgtttcaa ttttttttgt ctaagaagtc tcaactcatt
      661 catataacct cctctaagga ttacttttta gtaattgtac tcttatttac taaaaggtaa
      721 acaaaccaaa tggtattgat attattttta cctaatggta ttattttggc gtttttaaaa
      781 gaggactcac aatggaagaa ttaaaagcat acctcaattc tttaaccaca aaagagcaag
      841 agagttttgc cttgcgttgt aatacgacag ttgggtattt aagaaaatcg atctcaagaa
      901 attctcgatt aggtgcggaa atttgcgttg cgatagagcg tgaaacaaaa ggtttagtta
      961 ctagaaagca tttaattgaa gattggcact tacgctggcc ggaattggca aatgacaagc
     1021 aataaaggga aagttttttc taaaaaactc aaatcattct accacagtaa aaattcaatt
     1081 tttattagag tggcaatttt tatgctgctt gcgtggtggg tttttaacaa ttaaaaaaac
     1141 caccgctgta acggtggcta attactaagg aggtttccta tatgtatggg ataaatctta
     1201 acctaaacga aaaatcaagt caaacccaaa atgcaagaat tttggcacat cttcaaaatg
     1261 gcggtcgtat tacttcgctt tctgcgttag acgatttcgg ctgcttgcgt ttatccgctc
     1321 gcattaaaga tttgcgtgac cgtggtcacg atattcaaag cgtatttatt acagtgccga
     1381 atggcaagaa agtgaagcag tattttatgg agtgtgcgaa atgagattta gcacttacat
     1441 caacaatgca aaatgccttg aatggaactt aaatgctaat caaggagcat tatttgattt
     1501 actgaatcaa gctcctgctt gggcgaaaga aatcattatt gatggcgtgg tttattactg
     1561 ggtttcccgt aatgcggtga tcgaagaact acctttgttt tactcaaagc ctgataccgt
     1621 ctatcgccat tttgtcgagt ttcacaaaaa agggttgatc gtgtatcaaa aacacggaga
     1681 taaagacctt attcgattaa ctgaaaaagg gaagacttgg aatgagttta actcggattt
     1741 aaatccgaca ctcggaaata aatccgagtt agctcggaaa cagatccgaa aaagctcgga
     1801 tttaaatccg acaaataata atactaatta taaaaatact aatgatcata ataataccct
     1861 tacgggtatt aacgcacaca cacgtgagac taaaaaatct gctgtgttgg tgttgcttga
     1921 acaattcggc attacaggca aattggcgga ggattttatc gtacaccgca aagccaaaaa
     1981 agccccgatt accgaaactg cactgaatgg ctatcagcga gaggcagaca aagccaaaat
     2041 cccgattcaa aaggcggtag aaattgcgat tgaacgtggc tggacaggat ttaaagccga
     2101 ttggcagtgg caagacgatc aacctaaaca tcgcccaaaa gacaatatgc gagctgaatg
     2161 gaataaccct gaagcgtggg cggaggtgtt ttgatgagcc tgcaaaaaac agagcaaaat
     2221 cgaccgcttg cggtgttagg tgagcagcaa ggcaaattat ccggtgaggt tgaaagcctt
     2281 gtggacagaa tatttgacca gttgcttgcg agttgcccaa gtattcaata ctggtcggaa
     2341 aagcaagttg ccacagccaa aaaacaatgg attttaggct ttgcggagaa cggaatccgc
     2401 acggttgagc aagttcgaca gggtatgaaa gcgttaagag caaaaactga tgatttcgtc
     2461 ccgagtatcg gcaaatttat ccagtggtgc aatacgattg actatcacga attaggatta
     2521 cctgatttag agcagttact caagcttttg gatcgctctt taagatttga ttttattgag
     2581 attcagaaac ttaaatttaa atcaaacgct gaatattggt tgataactga cctatacgca
     2641 cgtaacaaga aatatagttg gaaagatgaa accttacgta atcaagcaga aaaagcctta
     2701 gtggcaatgg caaaacgaat tatgagcgga gagcaaattc caccacctaa accgctaatc
     2761 gaagagaaaa agaaagtgcc aatagatcca cgcattcagc gaattttgga cgagaagaaa
     2821 caagcaggag caatgcaatg acagattttg ataaagacac ttaccaaacg ccaaagtatt
     2881 tccgtaattg gctaaatcat cgctatgcgt ggtttcacat tgacggttgt tctaacggca
     2941 aaaacgcatt gtatagctac tggattggca aagcggcaga aggcttggac gaagacacgc
     3001 taagtggtca gattgccgag gatttcttgg cagaaaactt gctcgatgtg atcttggaac
     3061 gtgtggcaga ttggggcgaa ttactccgta tcttcgttaa tccgccatat agcaatccac
     3121 tcccttttgt tcagcgtgct gcggagctga aaaaagccgg tcatattgtg gtaatgctgt
     3181 tgccggcaga caaatctact cgttggtatc aggttatcca agaaaacgct agtgaggtga
     3241 tcgacattat cggtgggcgt attaatttta ttaatccgct cacaggcgag gaagtgaaag
     3301 gcaacaacaa aggctcgatg gtagcggtgt tcgacccgtt tgtggaggga atagttaccc
     3361 gtcaaatgcc gctggataag attaaggagc tgggcggcta tgaaaaataa cgaagggtgg
     3421 gaagtgtgat gagtgattct actattggat ttttagggat tctaattttc ttcgggtggt
     3481 tagcatattt ggtatttaga gcttttggat tttcattgag ggatagagat ggctaaatac
     3541 caaatgatga aattgccggg tgggatttta agcccgttaa acgatgaaga agccgagcgg
     3601 ttgaaatcgt ttcagaatgg cgagcagtac gaaatcgaga ttaaacgcca gcgtaatccc
     3661 gcttttcatc gcaaggtgtt tgcgttcttt aatttctgtt ttgattgctg gagtggtagc
     3721 cattccgatt gggagttcca agatccaacc gctcaatttg atactttccg caagcattta
     3781 actgtaatgg cagggtttta tgtgcagacg tggaatttaa aagggcaagt gcggattgag
     3841 gcgaaaagcc taagctacgc caatatggaa caagacgagt tcgagcaggc ttataaagcg
     3901 ttgattaatg cagctatcaa gcacgttttt aacaatacca aagatgagaa tacgataaat
     3961 cagttgtatt cgttttttta attaaggcga aatcgccata tttaattagg tttaattgca
     4021 ggagattaaa atgaaaaaga atgttattag atattggctt agcgtgccat tcagaattat
     4081 tgcagtgctt atttctttgt caattcttac tcttagatat atcgggtact tattgattta
     4141 tccattagca ttttttgtgg cagtcggtag ttttattgtt atcggtcaat ggaaatatca
     4201 agaatgcctt gatgacttta agagcgattt taatccgatt tagtgtgtgt ttattaattc
     4261 cctcgaattc gggggtagga gaaatcaaaa tgacaaaaat tctttgaaac tatcgcactc
     4321 gtgatgttat ttggcattat tccaagctgt ttattggcga ttaatactac tttaatgaat
     4381 attaaaaacg caccgtggtt tatggtgatt attcagttag ggttttggat tttaatatcg
     4441 tttgttatcg gttgcggatt attcctttta tgtggaatgt tatttaattt aaggagatta
     4501 ataagtgagc cagtgcaatg aactgactgt aattttaatc actatcgcta ttcttagtgt
     4561 atgtgccggt tcactctttt ttattgagtg gtttgataaa agagaccaag gaggttggaa
     4621 tggctaatct acgcaaagag gcaaaaggca gagagtgcca agtccgttta ccgggtatct
     4681 gtaatcataa tccggaaacg gtggtattgg ctcactatcg aatggcagga ttaaacggtg
     4741 tgggaatgaa acccgatgat attttcgggg cgtgggcttg cagtagctgc cacgatgagt
     4801 gcgaccgtag aactcgcaaa ttagaagcgg attatgtgag acaggctcat gcagagggcg
     4861 tatttagaac gcaggctatt ttacggagag aagggaaatt atgagtgatt ggcttgaaat
     4921 tgcgttgcct tatccgccga gtgtgaacca ttactggaag catacccgaa acggtaggca
     4981 ttatatttca gataagggga aagcctttag ggcggaagtg gtgaaaatct gcaaaatgtt
     5041 tgatccgttt aaaggagcgg tacaaacggt attgcagatt tactatcctg ataaacgcaa
     5101 gcgtgatcca gataatttag aaaaagcctt gtgggacgca ttaaaaatcg gtggcttaat
     5161 tgaagaagac gataatcaaa ttttagtcga taagcgaacc attacggcag gttttaagaa
     5221 agggggaatg gtggtgttaa agattaaggc ggtgggtaat gcaaattgat gtaaagggtg
     5281 tattaaattt atggggtgga tatgtgcgtt ttaccgactg caagggctat ccgacaatgc
     5341 aggcatttat gcgtgagtct ccacaagaga gaacaaaaca gcgttattta gcccgcttag
     5401 atgatgatac gcttgagaaa gtcgatcggc aaatgcggaa gctacaagcg aacgacaagc
     5461 gacaattcga tgtactattt tataaatatg cagtagggtt agagaataag caggtttggc
     5521 agaagttatc gctcagcaag acttcatatc atacagaatt acttcttgct gaacgattta
     5581 tggagggggc attagccggt agtgaaattc gtttgctctt gtagcttctc aacggctaat
     5641 ttaattagtt gattttgggg aatatttaac tgttgggcaa gttgctcgat ttgtgcgatt
     5701 gtgctttcgt gcagtttaaa ggctttaagt ttaattcccc gttttgcgtt gctacggttt
     5761 acaatttcgg ttcttgacag tgccatcata aatccttaat ataggttttg aagagtaggg
     5821 agatttctcc ccctacttag tttcattcaa ttagtatgct ggcaggctaa tcactaagag
     5881 aatgataact aggataatgc ggtaaagcat ttgttatccc tccaaaagtc ggtgggatta
     5941 aaggtcgcca ccggctcgtt tccagcacta ttactgaaaa caagtttatt atatgttgga
     6001 taaccaatat attcaagcaa aatatcgtta aaaagcccat ggttttgtaa attatgggct
     6061 tttttgcatt taaatgatta aaaagtgttg caaagttcgg acttaatcta tattatttat
     6121 ggtaagttgc ggttcattgc ataggtggtg aacttaaaag aattttacag ccctgagcag
     6181 aaatgcttgg ggcttttttg tttacggatt ttaagggtgt agctcaatag gtagagcaac
     6241 ggtctccaaa atcgttggtt gttggtttga gtccaaccac cctttccaaa tgcgagtaaa
     6301 tgttatgctg gaacaactaa atactcagtc aaaaagcggt gtagtaaatc caaaaagatt
     6361 tctaaatcct gatgtcgagg actaccagcc tgaaagtata tcaagatgcg ctcttcgctt
     6421 ccgaagtaag aaaatggacg aatactccag aaaagagctt gtgaaactat atcaaatgct
     6481 tgctcaggca cggaaaattc aatagataac tgctttttat tttcttgcaa gaattgctcg
     6541 aactgttcat caatacttct gataaattct aggttagttg caactgaatg ttcccggaat
     6601 gaaaactcta agtaagcgta tgatgtatct ctattgtctt tatgagccca ataagcacag
     6661 cctagtgtta gaagtttgct gtttggagtg ttcaagtctg tgagtaactt ttttaacatt
     6721 ggggagtgtg cggcttctgg tattagttct accttttcag gattggaaac aagatctact
     6781 ccaccaatac aaggtgtggc agtgtcgctt gaagtgtcgc ccggacgtgg tctaaatggg
     6841 aagtgataga aactatcgtc aatttgatca aattcaatca tttttaacct ctgctagttt
     6901 atttgttggg gaacagtatt ctagcagaat ttttaaccaa ggctcagttt tacgactggg
     6961 cttttttatt gcctcgaaac ggggtggagt atgaatacaa tgcctgaaaa gaaccctgat
     7021 atatatacgc aggcttggaa ttatcttgta atgtttttaa gcaatcataa tggctggatt
     7081 tgtggcgtta tcattgcttt ttttacatct attaccaagt catttctgta tggtaaaaca
     7141 gatacaccta aacgagtgct ggcagaggct atcttgtgta gcgttattgc tggctcaatg
     7201 cgtcctattt taatttatct caatgctgat gtatcactga ttacccctat tggtgcggga
     7261 attggattat tgggtacaag tgcaattcgc cagatgattt taaaattctt gaacaaaaaa
     7321 gcaggtggtg aaaatgtgga ttagtgaaag taagtttaaa caagtattcc ctaatgcagt
     7381 tagtggtatt tactcaatta ttgacaaaca cattgaaaaa gcaggctgca aaacaaaaga
     7441 gcaacaagcg atgttcttgg ctcagtgtgg tgtagaatgt gccggatata gtgtatttga
     7501 agaaaacctt aactattctg caactgctct attgcgaaca ttcccgaaat actttagcca
     7561 acacaatgtc gtactttatg ctcgagataa gcgtgctatt gctaatcggg tgtatgcaaa
     7621 tcgaatgggt aacggcaatg aacaaagtgg cgatggttgg aaatatcgtg ggcgtggctt
     7681 aattcaaatt accggtaagg caaattatat cgagtttgct aaatgggaag gcttaccaag
     7741 tctagtgact gaccccgacc aaatcactaa aaatctagca ttgacagtac aggtggctgt
     7801 ttggtactgg gtaagtcgca agttatccga atttagcgac attcttactg ttactaaaaa
     7861 gattaatggc ggaacgcacg gtctaactca gcgtacagct tattataaaa agctaatggc
     7921 ggactaaatg attaaataca tttatctagc tgccacagta atgattttgg gtttgtgtgg
     7981 ctggatttgg caccagtcca agcagattga tggcttaaga gccgaaaacc aaacacaagc
     8041 ccaaaccatt gagcagcagc aaaaagccaa tcaacggcta accgatagct tagagcaaga
     8101 gcgacaagcg gtcgaaaaaa tccaaaaaat tgcaaatgag ctgcggaata aagtggagat
     8161 ggccaagaat gaaattacat caatactggc acaagacagt tgtgctaagg ctgatttgcc
     8221 taatggtgtt gctgatagca ttaagcggtt gcactagcaa aacaatcgtc agcactgagt
     8281 atttatatcc gcctgcggct taccttgtgc cgtgcgagcg gacagcattt agcggtaaaa
     8341 cctacggcga tacggtggat tatctcatta aagtaatggg agagcgtgat ttgtgtgcga
     8401 gtcaaattga ccgtattaga gagtggcaag cacagactaa gcaagggttt aaataacttg
     8461 gcggattaaa ccgctaatga gagtgggagc ttaattgctc ccttttcatt tgcgttacat
     8521 tacttagtta tgcttttgat tgtatcaaga tcataactaa gcaatgtgtt gcatagtttg
     8581 taaaaggtac tcccgagggg ataccccttt ccacggggtt gcggcagcgt ggttttcggc
     8641 aattttttga gtttctaggc atcatcatct tcctatgatg ttgctgtttt ttaggcggtt
     8701 ttgattttta ggatttgagc aaatggacaa cttatttgat ctaaaactta acatcaatca
     8761 gatcgccgaa ctcacaggat tgcaccgcca gacggtatct cagcgagtcg ctgggttaaa
     8821 tccagcactc ggtagtaata gcaaattaaa actctatgct ctgcgtgatt taatcctcac
     8881 cgggttggcg gaaaagatgt cggcagatgt cgatagccta tcacctgctg atcgtcgtgc
     8941 gtggttccag tcggaaaacg aaagactaaa atttgaaaaa gaaattggcg agcttatccc
     9001 agcaagcgaa gtggctcttg aaatgtcagc tttagcaaaa acggtagtac aagccttaga
     9061 aaccttgcct gatattttag agcgagactg cggattgcag cctaaagatt tgatacgagt
     9121 gcagcaagta actgacgatg tacgagacca aatggcatta catatccaag aagttaccac
     9181 tgacacggag aatgaataat gtttgctagt gctaaagaaa ttcgacgtga tatagcaaat
     9241 gccataaaag cacctcggcg aatgagagtg tcagaagcag tagcggaata tatgcgtgta
     9301 ccacttggcg gaggcaactc ggtcaaatgg gataagcaca ccgccgccta tatgttagaa
     9361 ccgatggact gcctcaatag ccgagaatac gatgcggtga tttttgtcgg cccggcacga
     9421 acgggtaaaa ccatcggctt gattgacggc tggataacct actcaattat ctgcgatccg
     9481 tctgatttcc tgttggtgca acttacccaa gagaaagcta gcgaacatag ccgaaaacgg
     9541 cttgaccgca cattccgctg ttcgcccgaa attgccaagc ggctaagccc acgcaaaaac
     9601 gataacaatg tccacgacaa gtatttcaga gcgggcaact tgctcaaaat cggctggccg
     9661 tctatcaatg tgctttcttc atcggactac aaatatgttg ctctgactga ctacgaccgc
     9721 tggccggaag atgtggacgg agagggcgac ggtttctcgc ttgcctcaaa gcggacgacc
     9781 acctttatgt cagcaggaat gactttggtg gagagttcgc ccggtaaaga tattgttgat
     9841 ctcaaacata tcccgaaaag cacccacgag gctccaccga ctaccggtat tttaagcctc
     9901 tataatcgag gtgatcgccg tcggttttac tggcaatgcc ccgactgctc cgaatacttc
     9961 gagccgtcaa tggcaaatat ggtcggctac cgtgaagaca gtgattttgt caaagccagc
    10021 gaaaacgcac ggttacaatg ccctcactgc caaaccctga ttgcccccga actcaaacga
    10081 gagctaaata tcaagggcgt atggctcaaa gaggggcaaa aaattgatgc aagcggtcaa
    10141 attagtggcg aaagtcgcaa atcccgtatt gcctcctttt ggcttgaagg gccagcggca
    10201 gcctaccaaa cgtgggcgca gctcacctac aaactgctca atgccgaaca cgaatatgaa
    10261 atgactggca gtgaggaaac cctcaaagcg gtaacaaata ccgactgggg gttaccttac
    10321 ttaccacgat ctgcattaga acaacgccgt tctgatgagt tgatggaacg ccgagaagaa
    10381 gtagaagaga aaactgtacc agctcaatgt cgctttattg tggcggcggt ggacgtacag
    10441 ggcggtaaaa accgccgatt tgtggtgcaa atggtcggtt acggtgaaaa tggcgaacgc
    10501 tggttgattg accgctataa catctcacat actttgcccg acagtgatgg cgtgattgaa
    10561 aaaattgacc ctcgtattcc cgatgattgg tacatactga tttcggacgt actagaaaaa
    10621 cgctacccac ttgcccacaa tccaaaccac tttatgccga ttttggcgat ggcggtggac
    10681 agtggcggtg aagatggggt aaccgataac gcctaccaat tttggcgcaa atgccgccga
    10741 gatggctatg cgaaacgagt ctatttagtc aaaggcgaca gcaccaaacg gcaaaagctg
    10801 attaccaaaa cttaccccga caataccgca cgaagtgacc gccactcctc cgcacggggc
    10861 gatgtgccgt tgtacttgct ccaaaccgac tacctcaaag atcggattaa caacgccctg
    10921 ttccgtgata cggtgggggc gaactacatc cacttccccg actggctagg tgaatggttt
    10981 tttaacgaat tgacctacga agaacgagga gcggacggca aatggcggaa accgggcaaa
    11041 ggcaataacg aagccttcga cctgttctgc tatgcccacg ccattgcaat tttacgaggc
    11101 tacgaacgaa tcaaatgggg cgatgaaaac gatgtgccaa gctgggcaaa actgcccgac
    11161 atcaacccta atatcattcg ggaaacgcca agaacggctg aacaagcggt cgaaattgaa
    11221 gaaaaatccg aaaaaccaca acctaaaccc accaaagcaa aaagcagttg gttaagtggt
    11281 ggcggtagaa aaacaggagg ctggctatga gcctttacac catagacgag cttaaacaaa
    11341 aaatccgcac gcttgatgaa aaaatcgaaa ccgcccaaag ccaagtgagc tttaatggtc
    11401 ggtcggtttc atatcaagtg gcggaactaa ccaaacagcg tgatcgctat caaacaatgc
    11461 tggatgaaca acttgcccaa agcgggcaac gcaccaaaca gcatcgaatt aaatatgcga
    11521 ggtttatttg atgaacttcc tcgaaaaaac cattgccacc ctttccccga aatgggcggc
    11581 aaatcgctct cgaaatcgct atgtgctaaa tgcctatgag gcggcacagc ctagccgaac
    11641 ccataaggca agccgagaga gcaaaggggc aaactctact gttcgccaaa gtgcggtcag
    11701 cctacgggaa caagcccgag ccttagacca aaatcacgat attgtgatcg gcattctcga
    11761 caaaatggaa gagcgggtga ttggctcaaa aggcattcat attgaaccgc agccgctgac
    11821 gttggcaggt gaagtccacg aagaattagc tgggcaaatc cgaaagctgt gggcggaatg
    11881 gtcggtgaaa cctgatgtga cgggattata cactcgccca ttgctagaac gaatgctact
    11941 tcggacttgg ctacgagacg gcgaagtctt tgttcagttg gtgaaaggca aggtggcagg
    12001 gttagaacac ggctcacagg ttgctttttc ccttgaagcc ttagagccgg attttgtgcc
    12061 aatgcaatcc gatgaggcaa aaaacggctt ggtgcaaggc gtgtttctca atgcgtggcg
    12121 gaagccgact gcttaccaag tctatttaga caatccgcaa gaaagcaacg gaatgtacgg
    12181 caaagtgaaa accgtgccgg cagacaatat gttgcacctc gcctttcgca agcggttaca
    12241 tcaaattcgt ggtgtaagta tgttgcacgg tgtgattgtg cgattggcgg atctgaaaga
    12301 atacgaagag agcgaacgag ttgccgctcg cattgccgcc gcaatgacga tgtacattaa
    12361 aaaaggcgat gcggcactgt atgatgacga cagtaacagc gatggcgaac gcctgtttga
    12421 tattgccccc ggtgcggtga ttgatgattt aaaaccgggt gaagacatcg gcttaatcaa
    12481 ttccaaccgc ccgaatgtga atttggaaac tttccgcaat ggacaactgc gagccactgc
    12541 cgccggtact cgttcgagct attccagcat cgcccgagac tacaacggca cttactctgc
    12601 acagcgacaa gagctggttg aaagttttga aggttatgcg gtgctacaag atgcgtttgt
    12661 ggcggcaatc agccgcccga tttatcggga atggctcaaa atggcaatcg cctcacaagc
    12721 gatcaaactg ccgcctgata ttgaccaaaa ctctctcttt aatgcggttt attcaggtcc
    12781 tgtaatgccg tggattgacc caatcaaaga ggcgaatgcg tggaaagaac gaattaaagg
    12841 cggtttagcc accgaagggc aagcaatccg agccagtggc aataacccag ccgaagtcaa
    12901 acggcaacga attgtcgaga tcaaagaaaa tcaagccgaa gggctaaaat ttgataccga
    12961 tctcaccaat tacggtgggc aggataaatc tttctccaat caaaaagatg aaattaacga
    13021 agatgaataa caggagggtg cgtgaaaacg tggttcaaca ttcaagccaa agcgaatgac
    13081 accgccgaaa tctcaatttt tgacgaaatc ggcttttggg gtgtcaccgc ccaacaattt
    13141 gctaaagact taaaagccct tggcaacaat ttaaaacaaa tcaatctgca tatccactcg
    13201 cccggtggtg atgtgtttga cggcattgcc atttacaacc tgctaaaaaa tcaccctgct
    13261 aacaagaccg tctatattga cggtcttgcc gcatcaatgg ctagcgtaat tgcaatggca
    13321 ggtgatgaaa tcattatgcc tgaaaacgct atgatgatga tccacaaacc gtggggcatt
    13381 caaggcggtg atgcggatga tatgcgtaaa tatgcggatt tactggataa ggttgaaagt
    13441 acactgatta tggcgtatgt cgccaaaaca ggtaaatacg aaaccgattt ggcagaaatg
    13501 ctgaaagaag aaacttggct cacaggcaaa gagtgcgtgg agcaaggttt cgccgataag
    13561 ttagccgaac cccttgtggc gatggcttgt atccaatcca aaaaattaga ggactacaca
    13621 aaaatgcctg acaaaatcaa aaatatgcta ttcgcaccac aaggcaacgc aggtgcaaat
    13681 ccaaaacatg aacaacctca aacaccacca caagcgggtg aaaatccgca aaatgtggca
    13741 aaacctgatg caatggtggc attagcccaa cgcaatgcaa cgattaaagc gacctttgcc
    13801 gctttcggca cacaatttga cggcttgctg gcagaatgtt tagctgatgt gtcaatgacc
    13861 gctgagcaag ccaaagacaa gctccttgcc aaactgggcg aaaacaccac cccaagcgta
    13921 ccgcaaaacc acattcacgc aggtaacggt aacatcgttg gcgacagcgt gaagcagtcg
    13981 ttaatggctc gtgctggtca agataccgac aaaaccaacg caagagataa tgcctacaat
    14041 gcaatgacct tgcgtgagtt ggctcgtgcc tcattggttg atcgtggcgt gggtattgcg
    14101 ggctacaccc caatgcagat ggtcggtctt gcctttactc attcgagctc cgacttcggt
    14161 caaatcttga ttgatgtggc tcataaatcc ctactcaaag gctgggaaac cgctaccgaa
    14221 aactacgagc agtttaccac ccgtggcact cttactgact tccgaccggc aaaacgagtc
    14281 ggtttaggtg agtttggcta cctgccggaa gtgggcgaag gtgaagaata cacctacggc
    14341 acaatcggtg atgaaggtgc atctgttgca ttggcgactt acggacaact gtttagcatt
    14401 acccgtcagg cgattatcaa tgacgatatg catcttttaa ctaaaatccc tgagaaaatg
    14461 ggtgcagcag ccaaagcgac tattaccaaa ctggtgtttg ccttgattac cggcaatgcg
    14521 acagcccaag acggtaaaaa gctgtttgat gctacacata aaaacagctt aacgggtgcg
    14581 gcattgaatg tggaaaacat tgacaaggca atccagttaa tgaatggctt tgtaaacagc
    14641 cgtggtgaac cgctctctat tgagccagaa tttatgctgt taccaacctc attgcatacc
    14701 aaagcaaaac agattcttgg ttcgtcaagc gtggaaggtg cagacatcaa cagcggtatc
    14761 attaacccga tccgtgatat tgtcagcccg attaaatcgc ctcgcttaca aattgcagat
    14821 ccgaaatcat ggtacttgct caataaagag gcgattgaag tctcttatct ggacggggtg
    14881 gatagccctt acatcgagca acagcacggc tttacggtgg acggtgtttc gaccaaagtc
    14941 cgtatcgatg ctggtgtgaa tgtgattgac taccgtggtg tggtgaaagt gaccaacgct
    15001 taatttaaac aatttaaaac ctgaccgcac ttttaacagt gcggtttttt attatccgaa
    15061 aaaaggaaaa agagatatgg ctaaaaacta tattcaagac ggcaataccg tgcgtttaac
    15121 tgcaaccaaa gcgattactt ccggcgatgt cattgtggcg gaggatttaa ttgcgattgc
    15181 ggtttctgat gcggcaaaaa atgatgcagt agttggctta actaccggtg tttttagcgt
    15241 aaaagctaaa caagcagatg acatcaaaca aggtgcagtg ttgtactggt ctgaaacaga
    15301 gggcgcaact ctcaccgcag gctcaaataa acgacttggc attgcgtgga aagactctgg
    15361 cacatcatct aatcaagttg atgtgaaaat caatgtctag cccgtttgag caggcaatag
    15421 ctgccgccga tcaaactatt cagcaaacta tgatgagtga gtggttgatt ggcggcaagc
    15481 cttaccctgc aacttttgat gaagcccccg ctatttttaa cggtttacac tcaaccgatg
    15541 acagagctat tcacggcacg gaacgcacac tgaccctatt tcgggcgagt ggctacaaac
    15601 cgagattgga cgaccgagtg agcggaaatg gcaagaaata ccttgttaaa tcctatcact
    15661 ttgtcgatca gttaatcgta ttgcaattgg agtaaacaat gggttctcaa gtgaccggtt
    15721 taaaagaact gcaagcctcc ctgaaaaaaa tagctaggca aaccgtacct aaagcagccg
    15781 ctcaagcaat ccgtactgtt gggcggcaag caatgaataa ggcggttaaa tcggtggcgg
    15841 cagagattgg cgtaaatcaa aagacaatca aaggtagagc aaaaatgacg gcaaagccca
    15901 cgccgtcaag attgcaagcc acgattaagg ttaatcgatc acatatgccg atgattcggg
    15961 tactagagcg caagtccaac cgcctgtcac ccaccaaagg cagtattaga gttgggaaac
    16021 acactgtaca acgtggtttt cgccaacgac tcgccaatgg gcgaacgcac attatgtacc
    16081 ggcaaggtcg taagcgttac ggcattgatg tagcaaaagt gccgttatcc caaccactta
    16141 cacaagcatt tgatcgagaa ttgaaaaact atcccgaaca agtgcaagcg gaattagcta
    16201 aacaaattgc ggggaaatta tgaaaatcca cacaaaaatc cgaaaagaag tccttgaatt
    16261 attacagact aaattgccgg aaattgataa tttttataac gggctgccaa cttttattga
    16321 tattgaggag gaacaacttg cagtatcggt ttatctcgat gatatcagtc tgcaagaaat
    16381 aactgtttgt aataatcaat gggacgccaa gctcaatatt acaatccatc tgaaatctac
    16441 cgagagtgca gaagatgaat tagacgaatg ggcggaaaaa attcgtgaaa ttatcgatga
    16501 ttatcccgaa tttgagcatt tagagtcagt cgcgctctct cagtatcaat atgagcaaga
    16561 ccagaatcag cgtacgtggc acatggcgac attaatcttt gatgttgagt attaaacaaa
    16621 taatctctat aggagactta aaatggcaaa aacaacaaaa gtccaaggca cgaaatttag
    16681 aattagcgtt ggacgtgagg ctcaaaaagc aattaccgca attaacttaa atactgctac
    16741 tctaacgatt gcatcctcag gctataaaaa aggtgatgca atcgagctta caggttgtgg
    16801 tcaattagat ggtatctacc cggtgttatc agtaactacc gatcaggtaa aattatgcga
    16861 agaagtgaac tggacaggta aagatttacc agctaattac accaaagcca aggcggcact
    16921 agtgcaatac tcggagcaat tctgcgcggt aaaaaacatt gaaaaatctg atgatacttt
    16981 gagtaccgaa gatgtaacaa cggtttgttc agagggcaca gaaaccgagc cgggtgaaat
    17041 tgaatttggt tcgatcaaac tcagtttctt ccacaagcct actaccgaaa tgcaaacccg
    17101 attgcgcaaa ctcttttacg acaaatccac ctttgcctac aaactggaac taccggataa
    17161 ccatggcacg acctatggcg aaggctttat tgaggccggc aacggtttct cgggcgaagt
    17221 taagggtaag tatgaaggct ctgtatctat taagccaagc aaacgcgact acttattagt
    17281 ttaattgcaa aaaaaccata aaattcgacc gtttgtagaa ataacaagcg gtctttttat
    17341 atcagaattt tacaaaagga acgaacaatg acactgcgtg agaaactcct tgctaataaa
    17401 ccaaaattgc aacctatcga aatcaacggc gagacctact acctgcgtga agctactgtt
    17461 ggtgatatga acaagcagat ttttgaaacc cgaagctggc tcattcaaca agctgaacaa
    17521 gaaaatgttg aattaccggc agaagatgat gaaacctttg atgaggctct caaccgtttt
    17581 ggcgaaaaat accgccttgc tcaatcggtt gcctaccgct tatgtgatga aaacggtgta
    17641 ttactgttta atcctctcga cattaacgat ctgaatgcca ttgccgaatt agacagtaaa
    17701 gtgattatcg actttaacca agccgtgtcc gccccaaaag actcagcgag cgaagaaagt
    17761 tccaaataac cctttcgctc gcactgggta aaacacttga agaaatcgaa caaatgcccg
    17821 aacgccactt tgccgaatat cggcttttct accaagaaca gcctttcggc ttatggcgag
    17881 acgattaccg caccgcccaa cttgcccact taaccgcaat gttcaaccgt gatccgaaag
    17941 gcaaagctcc aaaattagcg gagtttatgc cgttttttaa tcggacagat gaggtggagg
    18001 aaatagaaga tgatggtgtg gcagattatt tggcgaaaag gtaaagaaaa cagcttgaaa
    18061 ttccttgctc ttggatatat atttcctcaa agagaaggag ggaagtatgt ttgaagcact
    18121 agaccgtttt atgattaata cgattaaaat tgcaattatt gtatttttgg tcgcttgcat
    18181 ctttattagt atgccgaact ggtggatagc ttctatctta gtacttttcc cgactgccta
    18241 tttgcttgat aaatactggt ggcgaaatac cgaaatgtat cgccgcaaaa tggataaatt
    18301 agttaaagag atgaaaaata atcgtcaaat ctaaattaac atcaattcta gcccgcttta
    18361 tgcgggcttt ttatttgggg tgaaaaagtg agtagctcaa acagattaac tattacctta
    18421 gatgtagaaa attctaagtt actagctgga ttcgcacaat ctgatacagt agcaaataag
    18481 tttgctcgca gcttcattgt gaatatggat caggctcagc aaaaagcacg tcaatttgct
    18541 gatagatcga caaaatatct aaaaaatatt gaacaagcag caaataatct taatagctct
    18601 gtatcaaaag aacgtttttg gcaaattgca aatcggttgc aattcccgac aagtaaagtg
    18661 attagttatg ccaatagcta caccgaactc ggtaataaac tcaaattagt caccgaaagt
    18721 gaatcccaac acgcccgagc aatggcggcg gtgtatgata tttcgctcaa aaccgcccaa
    18781 tctacacagg caacctcttc ggtttatcag acctttgctc aaaatgcaaa acagctcggt
    18841 atttctcaaa acgatgtggc aaaactaacg gaaacggtag ccaaatcggt tgctatttcc
    18901 ggtgcaagtt cggcaaccgc ttcaaacgcc ctagtgcaat tcagccaatc gttgttaatg
    18961 ggtaagctca aagcccaaga atttaactca ttgatgaccc aaacaccgtc tgttattcag
    19021 gcgattgcca aagggttagg cattaccact gccgaactta aagcaatggt ggataacggt
    19081 gagatgtctg ctgaaaaaat gattgagggg ctaaaaaaag cagagagtta tgtaaacgga
    19141 cagtacgcca aaacaaccac tacaattagt ggagcaatgc aaaatctttc aactgcggct
    19201 gaaaagtggg ttggcgaaat ggatagtacc gttggtgcgt cacagaaagc cgttgccgtt
    19261 ctgaatgcgt taaatgctca ttttgatacg ttcgctaaaa cagcacttgt cgcaggtggt
    19321 gcatttgtgc ttttcaaagg ctatatgagt gtacgcccat ttatcgaggc tagagcggcg
    19381 atttatgaga atcgaaaagc aattattgcg gaaaatcagg ctcgccaaca aacgatagct
    19441 actcgtcagc aggaattggt tgtactctct caacaaaccg ccttaaaact ggaacaaaca
    19501 ttacaaacct acaatcaaaa taaagccgaa ttagaggcga ttgcggttaa acagcagaaa
    19561 atcacaaaag aacgagaaga aattgctgtt gctattcaag cggcggcaac tcgtacggaa
    19621 agattagcgt tatctgctga actgcaagcg ctagatcaga aagaaatcgc tctcgggcaa
    19681 cagaaaatag cggttgaacg ccagcaaatt gcaacaaaac aggctctcaa agtggcgtat
    19741 gctgaaaatg cagttgctca aagtgcaatg aatgcaggta tggtcactgc aaccacaaca
    19801 accagagcga tgaatggggt tttagcggct gcaagagctg aattgaactt actgaaagca
    19861 gctgcactgt ctaacccatt aatgactctt gcaatggtgg caacgactgc cggtactgcc
    19921 ctttggggat tttttgaaag tcaaaaagca gctcgtgaag aagccctccg ctacgcggac
    19981 agcttagact ccgttcgagc caatatcgaa aaaatgacta aggctcaaac tgatgcagaa
    20041 atggttaaat tgtctcgttc tatcaaagaa caggaaacag cattagctag tctgaaacaa
    20101 cgccaagctg aacttacacg agaaatcgag caaggagcta cggttttaga tgatgccttt
    20161 ggtgccggtg tccgtttcga aaaaagtgcg aaagagttag cgaaagcaca agaagagtta
    20221 aagttagtta ctgctgatgt tgaaaaagca caaaatacat taaatgccag tttagaagct
    20281 caagaagcct tacaagctca cgttccaatc gctaacctac gagaggaatt tgtcaaatta
    20341 tatcctcaca ttgacgaaag ccaaatcaaa gttgatggct taaatattgc tatcggtaat
    20401 tttaccgtca aatcaccgga gatggttatt gccgctaata acattgctaa tgctcttggt
    20461 ggcgttgccg gagaggctat gagagcggct attctagtcg ctaatctgtc aagtatgaag
    20521 ctggatgcta acggtgctgc aattatcgat cctaaacatc ttgaaaaaat cgagcaaatt
    20581 gaacgtaaca atgcgattgc ttcggctaaa ggcaaagata aaatcgcatt gcaagtaaaa
    20641 gacgctctga ttaaatcagg tatgaaagag ggcgatgccg gatacgagcg actaaaagca
    20701 gcatatgagc aacaatttac gttgcaaaat gcccctaagc gcggcggaaa accgaagaaa
    20761 accaaagccg aacgctctgc cgaaagttac caaaaccaag tagcggagat gaccaatcgt
    20821 ttatccggct taaagataga taaagaagat ctcgtaaaat atggtggcat ttctcaatat
    20881 caggaagtgc gtaaacttac tgaagatatt gctctgaatg ctgaaaaata taaaaactac
    20941 ggcactgaag gcgtggctaa actcaaagag ctggctgcta aaattgattc tgaacaacag
    21001 cttttagaca ttgagcaatt ccaagtcgat cacgataaaa agctagaggc aatgcaattc
    21061 gagctggatt tactgggaaa aactcgtact gaaaaagaat tgttacaatt taacaatcaa
    21121 ttagatttag aggccgagcg gctgaaaatt aatatgacga aagagaatat tgctctttta
    21181 gatcagaaaa ttgccaaaat taaggaagaa tacgagctac atcagaaaaa gcaggaagaa
    21241 actcgtgctt ctgtaatgat gggaataaaa gaaggctgga acaatattga aaccgatgtc
    21301 agcaatgtgg cggcaaatgt tgccaatatt actcaaaata cctttgacgg tatggcggat
    21361 agcttgacta attttgtgat gacgggtaaa gcggattttc gtagttttgc taattccata
    21421 ttatctgatc ttagcaaaat gattatcaaa atgatgttat ttaatgctat caaacaaggt
    21481 gcaactatgt tgtttggcta ccaaggaccg actacaacgg taaatggtaa tgctgtttat
    21541 ggattaggta cttgggcaac aggtggctac acaggcaatg gcggcaaata caccccagcg
    21601 ggtatcgtcc acaaagggga atacgtcatc accaaagagg caacctctcg tcttggtttg
    21661 gattatttga attatcttaa ctatggcaga cgtggttttg cctctggcgg tggtgtcgct
    21721 gtaccaagag taccgtcatc atcttatcag ccgaaatcgg ctcaaagtag tatcagcgta
    21781 caggtcatca ataatggtga gccggtagat gccaaagtca gccaaaaaca gcaaggcgag
    21841 caaacgcaaa ttactgttga gttaatgcgt aaaattgccc gtcaggaagc gaacggaatg
    21901 attcagaaca actttagagc cggaggagta tttgcctaat ggaaacatta caatggtgtg
    21961 ttcgcaccga tttagcggtt gaaaataccc ctgaaataat ggaagtcaaa ttcggcgatg
    22021 gttataccca acgctcgccc aaaggcttaa acaatttatt acgagcctat acaggcacaa
    22081 tcaaagtgaa aaagggggaa catttagcgg tggaggcatt ttttgccaaa catcgtggtg
    22141 tttccccttt ttactttaaa gatccgtaca cacaacaaaa caaaaaggta gtgtgtagca
    22201 gttggcccgc aaaaatggtt ggcttaaacc attgggaatt tagtgtaacc tttaaggaag
    22261 taccctaatg cctgttagca tatccaatca aatgaaactc gaccttgcca aacttgagca
    22321 aaatgcaatg cttgatttgt acgaggtaga tttacgcaca ttaaaggata aaagcggtaa
    22381 tgctggctca gtttaccgct tttattcggg gttaaatgaa ctcaaaacaa gtattgtctg
    22441 gcaagggcgg acttacgatc cgtacccgat tgaggcaagt ggatttgaac gaaacagtag
    22501 cggcccaagc aatcgcccta ctcttacgct atcaaatctg tttggcttag ttacgggtat
    22561 tgctaatcag tttgatgagt gtatcggggc gattgttcgc cgtcatcagg tttacgccca
    22621 atatttagat gccgtgaatt ttgccggggg taatgcgaaa gctgatccaa atcaggaaat
    22681 aatcagtcat tttgtgattg agcagcttac cagcctcacc cgagaaacgg cgacctttac
    22741 gctggcatta ccgattgaaa ctgataatgc caaaatcccc agcagaatta ttatggcgga
    22801 cacctgcact tggatttacc gctcggcgga atgtggttat accggtaagc aatattttga
    22861 tgaaaaagac aaggcaacat cagacccaaa agccgataaa tgcagccatt gcctgaacgg
    22921 ttgtgaattg cgaggcaatc agcgtaattt tggtggattt gtatcggtga ataaattggg
    22981 gtaatgaatg gaattggaac aacaaataat cgactacgcc ctccaacacg aaccgcacga
    23041 aatgtgcggc tttgttgttt ttgacggcaa taaaaatcga tttatccctt gcgaaaacca
    23101 agcggaagac aaagccaatt actttgaaat atccgatctt gattacatca aagcagaaga
    23161 aaaaggcgaa ctggtagcgg tggtacattc acatcccgag ccaaacggca agcctatatt
    23221 atctgtgctt gatcgcaaaa tgcaggtaca gaccggttta gattggtggc tagtgcataa
    23281 tcggcaaatc cataaattcc gcaatgtacc acatttaatc gggcgtgagt ttaaacacgg
    23341 cacaatggat tgttacacgc tctaccgtga tgcctatatg cttgccggtt acgagatgga
    23401 cgaattcgat cgacaagatg actggtggca taccgggcaa aatctttatt tggataatat
    23461 ccaagggcaa ggttttgagc gagtgggaac cccacaaatc ggcgatgtga ttttaatgca
    23521 agtaggtgct gatgtgccga accacgctgc catttacatt ggcgaacaga tggtaatcca
    23581 tcatagcccg aaccgattat ctaagcgtga tttatacgac ggctattggt tacgtcatac
    23641 ccacagcatt tggcggcata aactggcgga taagttagat tttgacggca tattgaatga
    23701 tattgctgta aataactaac aaaaaatgac cgcttgtaac aaaaacaaac cccgaagcgt
    23761 ttgcagcact tcggggtttt tcatatccac ttacctaact aagaggacat aaattaaatg
    23821 aatgataaac gatttacatt caaatttcta ggagttctta tggaagcaat taatattacc
    23881 ccaaaagaaa tcagaaaaac aatgtggaca gccgcaataa ttctcttttt gtttgcgttc
    23941 atctggaaag cccctgaatt tatcactgct attcgttggt ggtaactatg attacagtta
    24001 aattttacgg acacttaaga aaatttggta cagactttaa gcttgaggta aaagacaccg
    24061 ctgaggcaat tcgtgcctta tgtacacaga ttagaggatt gcgtgaggca ttgcgagacg
    24121 gtgtttataa agtccgtatc ggtaagcaat atttagaccc atcagccctt gaaaaagggc
    24181 ttttttattg cttgaagaaa gggcaaacca ttcattttac ccctgttatc aaaggggcga
    24241 aaagcggggg tgttttccaa gctgtgttag gtgtagcctt aattggagcc gcattttttc
    24301 tcgggccggt cggttgggga gttctagggg cttcttccgc aatgatgatg ggagcaatgg
    24361 gggcatcaat gttactagga ggagtttccc aaatgctcac caaaatgcca aaagccccca
    24421 caatgggtaa tgaaacagaa aaagaaagct caacggcttt ttcaaattta aataacttgg
    24481 tggctcaagg caaacctgtg ccgttggctt atggcttaat tcggaccggc tcgcttgtga
    24541 tttcacaggg agttgagacg atgactgtag aggtataatt atgggattat ttagtcgtaa
    24601 gagaaaaaat catactccta aagaagcacc ggaaactggt cgctctaaac agattgtgaa
    24661 tatcgtggag ttactctgcg agggtgaaat tgaaggcttg gtagatggct ttaaatcgat
    24721 ttatcttgac ggcacgaaaa tccaaaacga tgacgacagc tataatttta ataatgtgag
    24781 cggtcagtta aatgtcggta cgcaagatca agaggtatta gaaggttacg acagctcaca
    24841 aaatgaagtg agtgtgggtg tagaagtcaa gaaaaaaaac ggtgcaatcg tccgcaccgt
    24901 tactgatgaa cgcatcagcc gtttgcgttt aacgttgggc gtgcggtcac tattcca
//
LOCUS       DANLTI010000022        24891 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.022, whole genome shotgun sequence.
ACCESSION   DANLTI010000022 DANLTI010000000
VERSION     DANLTI010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24891
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.022"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..619
                     /locus_tag="PXB09_000716"
     CDS             <1..619
                     /locus_tag="PXB09_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595-like element ISMha2 family transposase"
                     /protein_id="HDL5232859.1"
                     /translation="HKLIELFVAGVTARTAAELVNVNKTTAAYYFHRLRLLIYQHSPH
                     LEMFEGEIEADESYFGGARKGKRGCGAAGKTAVFGLLKRDDKVYTVVVPNTQSATLLP
                     IIREKVKPDSLVYADFYRSYDVLDVSEFNHFRINHSTHFAENHNHINGIENFWSQAKR
                     HLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(818..1057)
                     /locus_tag="PXB09_000717"
                     /pseudo
     CDS             complement(818..1057)
                     /locus_tag="PXB09_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
     gene            complement(1312..1806)
                     /locus_tag="PXB09_000718"
     CDS             complement(1312..1806)
                     /locus_tag="PXB09_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5232860.1"
                     /translation="MSRKYKFHEKSGAYFVSFATVYWVGVFVREIYFQVIVDALDYCR
                     KHKGMILYAYCIMPTHIHLLFQAENQNPSDLIRDFKTFTAKILIQRIKDNLQENRREW
                     LLWMFSRAAERRCNVKQYQFWQHHNQPIEIYSQKFFDEKLNYIHQNPVVSGFVSEPWE
                     WKYN"
     gene            complement(2410..3249)
                     /locus_tag="PXB09_000719"
     CDS             complement(2410..3249)
                     /locus_tag="PXB09_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5232861.1"
                     /translation="MGEFNCPDVNFPHTATGKHKRINYSATLSAYIHDLFTPFISYSQ
                     THRAPNIKEIFFSNLGDYGVNTALQPEQAKTTQFGINGFKERVFSEEDKLGFKVLFYN
                     THLKNYIYNVQHTAVGSAPSLFIFHKNYEKPVNIKGIELEFSYDIGSFYGNLAYARQN
                     TNQPVSFTDASSRVDAASHYGFKTQGFGASKISALPRDYGSLELGTRWFDQRLQIGGV
                     AKYYGKSKRIAIDEFNYTYYPGTHIVKETHRLEETVNKQPIIVDFYVSYEPIKSLILK
                     LEL"
     gene            complement(3916..4293)
                     /locus_tag="PXB09_000720"
     CDS             complement(3916..4293)
                     /locus_tag="PXB09_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5232862.1"
                     /translation="MDKSQGVVSVNIRGGSGFGRANNAVGPNYMGMLAGKYQFNDSTW
                     IGALFGHSWRKISQNYKIGGGRKVTDSSIDLSKIDDLDKESSTTSPFNAAHLKQKPMS
                     RMAKLEYGDKYQTITLLPKSGSG"
     gene            complement(4742..4924)
                     /locus_tag="PXB09_000721"
                     /pseudo
     CDS             complement(4742..4924)
                     /locus_tag="PXB09_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5279..9175)
                     /gene="purL"
                     /locus_tag="PXB09_000722"
                     /gene_synonym="purI"
     CDS             complement(5279..9175)
                     /gene="purL"
                     /locus_tag="PXB09_000722"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDL5232863.1"
                     /translation="MTIQTFRGSPALSAFRIQQLLQKFQQNQLPVKSVYAEFLHFVAL
                     NRPLVADEENKIKELLHYGPTLEEDEPTGFCLIVTPRIGTISSWSSKATDIAHNCGLA
                     AVERIERGTAYYLEFSETPNESQLTTLKGLLHDRMMETVLDNESQAEQLFAQQEPKPF
                     TSVDILGGGRKALEEANINLGLALADDEIDYLVENFTQLGRNPNDIELYMFAQANSEH
                     CRHKIFNADWTIDGVKQEKSLFKMIKNTFEKTPDYVLSAYKDNAAVMEGSTVGRFFPD
                     QDGQYRYHQEDAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGAKPKAGLT
                     GFSVSNLVIPKFEQPWENPLSKPNRIASALDIMIDGPLGGAAFNNEFGRPALLGYFRT
                     YEEKVNSFAGEEIRGYHKPIMLAGGIGNIRAEHVQKGEIPVGAKLIVLGGPAMNIGLG
                     GGAASSMASGKSKEDLDFASVQRENPEMERRCQEVIDRCWQMGAENPILFIHDVGAGG
                     LSNAMPELVHDGECGGKFDLRNILCDEKGMSPLEIWCNESQERYVLAVSPEKLDIFTA
                     LCERERAPFAVIGEATKEKHLTLADPHFDNKPIDLPMNVLLGKTPKMQRDVLSKTVKN
                     PPLATADIDLKEAFHRVLRLPAVAEKTFLITIGDRSVTGMVAQDQMVGPWQIPVADCA
                     VTTASLDSYHGEAMSIGERSPVALLDFAASARLAVAESITNIAATNIGDIKRIKLSAN
                     WMSAAGHEGEDAGLYEAVKAVGEELCPELGITIPVGKDSMSMKTTWEENGEQKSVTAP
                     LSLVISAFARVEDVRKTVTPQLRTDKGDTRLLLIDLGEGNNRLGATALAQVYKQLGDK
                     PADVVNVARLKGFFNAMQTLVAQGKLLAYHDRSDGGLITTLAEMAFAGNCGISVEIDR
                     LVDDLAVLFNEELGAVIQVRTEELSEVQAVLNAENLANLTFDIGTAVESDSFEITRNG
                     TTVFSQKRSELRGIWAELTHQMQRLRDNPECADQEFAAKKDPNNKGLSAFLTYDVNED
                     IAAPYINKGVKPSVAILREQGVNSHYEMAAVFDRAGFNAIDVHMSDLISGRRNLNDFN
                     AMVACGGFSYGDVLGAGGGWAKSILFNPMLRDQFSKFFANPNTLALGVCNGCQMVSNL
                     AEIIPGTENWPRFVRNKSERFEARAAMVKINDTNSLWFNGMAGSHMPIAVSHGEGQVE
                     FKNPQQLANLQQQNLVIAQYVDSHLNPTEQYPANPNGSALGITAIGNTDGRVAIMMPH
                     PERVFRAVSNSWCPEDWTEGGAWMRLFRNARVALKY"
     gene            9437..9616
                     /locus_tag="PXB09_000723"
     CDS             9437..9616
                     /locus_tag="PXB09_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232864.1"
                     /translation="MFKEKGYDEFLAEKIRLGLEDMQSGNGLSLDESKARTKQLIERK
                     ARELANFEQENIIYG"
     gene            9609..9896
                     /locus_tag="PXB09_000724"
     CDS             9609..9896
                     /locus_tag="PXB09_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5232865.1"
                     /translation="MAKTLRISSRAQNDIEEILASVIEYTGFESSGIRLQEDIYQKFE
                     TIAYMPSAAGRLREDGTREAFTRRYRIVYTELENEVWIITIIHSSRLYPRI"
     gene            complement(10022..12124)
                     /locus_tag="PXB09_000725"
     CDS             complement(10022..12124)
                     /locus_tag="PXB09_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5232866.1"
                     /translation="MKSFKLLPVSAAVLSVLAANAVAQTASTDAVVLDTVTVTDNQGL
                     KVQSNVVTTKKKDESTQTDLRGLLKDEPAISLGGGNGTSQYLYIRGMGQNSIDVKVDN
                     TYSDSQILYHQGRHMLDPALVKIVSVQKGAGSASAGIGQTNGAVIAKTVDALDLLKNS
                     DKNFGAKLGTGFSTNHAHNFNATLYGKGEIFDALVSGNLVRDRDYKGGKDYVNQFGTN
                     RVPYSALDKTSFLAKLGATLGDHRFVLSHSSERNEGQRLVREEFDVAPNGTKVSPYNR
                     LTVERQAPANRRITVQRTNLEWTGKNLGFAQEATANVYQLVQGRWSENETGNGYAGGV
                     DYATKTKIVTHGANVNFDSALHENVLLKYGVNYRHQEAKPHTKFNPLVKNQEKTDTGV
                     YVEAITAPVDKVTLTTGVRYDHFKFKAMDGKERSNGAFSPSVGLIYEPIEHLSLSASH
                     NYATRSPRLYDALTAHGNRKIVSIGSNTKAEKARNTEIGFNYNNGTFSFDGSYFWQDI
                     KDALGGGRDSHNPNNELIMNLGKIKNRGYELNAGYHNGGFTARIGVAHSKPRFYSPTI
                     WEVNRQTGKREEKPLLSTNPEYASAIGRTWTASLSYRFEQPNLEVGVHHRIVEKVKPE
                     DNFFVTGGTLQTNTGTGKDGYNVTDITLNWKPLKDDSVNVNFAVDNVANKKYNAHGQR
                     GQLSARGREFRAGVNYTF"
     gene            12407..13153
                     /locus_tag="PXB09_000726"
     CDS             12407..13153
                     /locus_tag="PXB09_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5232867.1"
                     /translation="MQLRHKQIMEYIQQFDEANVQELAEHCGVSIETIRRDLNKLDKD
                     GLLHRTHGGAVSHKKRDIGRSFTTRQRLNSEAKRSIAENVLEYLQPESVIALDASSTS
                     WNVAQRIPNIPCTVVSSSMRIIYSLSHKPHIKTIATGGIYSEKYDAFYGPLSEQLLTR
                     LKIDLAILSCTGIADGAIWESNEINISLKRKLIANSKQVFLLADHSKFERKDLFRIED
                     LSCIDKLFINQPPPDFLKNYCLAHQIEIII"
     gene            13349..15112
                     /gene="fucI"
                     /locus_tag="PXB09_000727"
     CDS             13349..15112
                     /gene="fucI"
                     /locus_tag="PXB09_000727"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDL5232868.1"
                     /translation="MTTLKSTPVKIGIRPTIDGRRLGVRESLEDQTMNMAKAVAQLIQ
                     SEVRHPNGDFVECVIADSTIGGVAEAAACAEKFKRENVGAVITVTPCWCYGSETIDMD
                     PHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDQSIPDDVREK
                     LLHFARAGLAVATLRGKSYLSIGSVSMGIAGSIVNQQFFQEYLGMRNEYVDMTEIKRR
                     LDRHIYDAEEFKLAMSWVKTYCKEGIDVNAPENQRSPEEREKLWEDVVKMTIIARDLM
                     VGNPRLAELGYSEEALGHNAIAAGFQGQRQWTDHLPNGDFMEATLNSTYDWNGVRAPY
                     IMATENDSLNGVNMLFGNLLTGQAQIFADVRTYWSEDSVERVTGWRPESGFIHLINSG
                     SAALDGTGQHTDRAGKPTIKPAWEVTEEDGKRCLENTCWCPAVHEYFRGGLSSQFLTK
                     GGMPFTMHRINLIKGIGPVLQIAEGWSIDLPENVHDILNKRANETWPTTWFVPRLTGK
                     GAFTDVYSVMANWGANHCVATFGHVGADLITLASMLRIPVCVHNVEDKDVFRPSAWNG
                     FGQDKEGQDYRACANFGPLYK"
     gene            15306..16739
                     /gene="fucK"
                     /locus_tag="PXB09_000728"
     CDS             15306..16739
                     /gene="fucK"
                     /locus_tag="PXB09_000728"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDL5232869.1"
                     /translation="MPISLIFDCGATNLRTIAINQAGEIVAAHHLPNNTQPDVESPEF
                     HIWDIEEIWSKLMTCAKQTLSQLSEQQRQEIVGISVTTFGVDGALFDKNGKQLYPIIS
                     WKCPRTLPIMENLANYLDVEALYQRNGVGHYSFNTLFKLLWLKENKPEIYQQAESFLF
                     ISSILTYLLTGVQTTDRTMAGTSMMTNIENDSWDKTVLDLLGLTENHFPPMKSAGEVV
                     GTLKGEISQELGLSGQIPVISCGHDTQFAIFGSGAGYNQPVLSSGTWEILMVRTPKAK
                     PQWQFVQNGLTIEFDSQSGYFNPGVQWVASGVMEWFGKRFFSDIANTEHYYRTMIEEA
                     AEVPAGSNGVKLVGNFDGTTAKTGSIIGLSMHITRGEIYRAGLEYMAHRLKEGLDVLQ
                     EVGHFNAESLICVGGGSKNALWNQIRADVLNRPIDVVDFPESTVLGAAMFTFTGAGVF
                     ENPNAAQQAMKPNVKRVEPSSNSQFYK"
     gene            16814..17245
                     /gene="fucU"
                     /locus_tag="PXB09_000729"
     CDS             16814..17245
                     /gene="fucU"
                     /locus_tag="PXB09_000729"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDL5232870.1"
                     /translation="MLKGIHPAISPDLLKVLAEMGHGDELVLSDAHFPAHSIHQNVIR
                     ADGLSVATLLEGISALFEFDQYVEAPLAMMQAVKGDTLDPSVEERYLNAIKKVNGTAP
                     KIERVERFAFYDRAKNAYAVVITGELAKYGNIIIKKGVTPV"
     gene            17305..17958
                     /locus_tag="PXB09_000730"
     CDS             17305..17958
                     /locus_tag="PXB09_000730"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDL5232871.1"
                     /translation="MDRKILARQIIDTCLEMTRIGLNQGTAGNVSVRYKDGMLITPTG
                     TPYEQMTEDSIVFVDGNGKHEEGKLPSSEWQFHLAVYEARPELNAVVHNHAKNCAAVS
                     ILGEPIPAIHYMIACTGTNHIPCVPYAPFGTHQLADYVREGIKHSKAILLAHHGLITA
                     DKTLEKALGIAHEVEVIAEWYLKLLATGKPIPTLNKEQMDIVLGKFKSYGSWVESEQ"
     gene            18020..19549
                     /locus_tag="PXB09_000731"
     CDS             18020..19549
                     /locus_tag="PXB09_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5232872.1"
                     /translation="MQNEVILTMKNISKSFAGVNALKGVELTLRKGEVHALMGENGAG
                     KSTLMKCLLGVYQADEGEIIYKGQPVRFESVLEAQKAGISMIFQELNLIPHLTVAENI
                     FFAREPLKHGLVDKDKMVEESAKLLNFFEIDVDPNDEVRMLSVAKQQMVEIAKALSFD
                     VEVLIMDEPTSALTEKEIDKLFELVDRLRAKGVSIVYISHRMEELKRICNHITIFRDG
                     TYVSNHKFNEITMDEIITKMVGRSLDNHFPPKTAVVTNDIILSIMNAERKGVFEPLNF
                     DLRKGEILGITGLVGAKRTELARAIFGADPLDSGEIFVHENKVSIKDPSDAIKAGIAY
                     LSEDRKLNGVAVRMSIRENITMASMDKVANQIGVISYDEEEKASKTFIDKMEIKTPTI
                     EQKVQNLSGGNQQKVVIGKWLFREAKVMIFDEPTRGIDVGAKYAIYQLLDELAANGVG
                     VIVISSELPEVLGVSDRIIVMREGRMTGMLETKKTNQEEIMHYATGVKNMFAREYGVE
                     K"
     gene            19546..20544
                     /locus_tag="PXB09_000732"
     CDS             19546..20544
                     /locus_tag="PXB09_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5232873.1"
                     /translation="MNEKQKEMLRKMAALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQ
                     TSTIALIGIGATCVILTGGIDLSTGSVVALSGVAAAMIVNAGVPVPLGMILGILVGGI
                     CGLINGILVTRMKLPPFIATLGMMMVARGLALYVTNAAPVSGMPESFANLGNGALFKI
                     VEEGANGLPKVVFAGIPYPVIIMIFITVLFTFALSKLKVGRYLYAIGSNEEAARLSGI
                     KTNIVKIYAYVASGLLSGLTGVILASRLVTAQPNGGVSYELDAIASAVVGGTSLMGGV
                     GTIPGTLIGSFIIGVLRNGLNMNGVSSFVQMIVIGLVIIVAVSLDQLRQSKKAGKK"
     gene            20568..21515
                     /locus_tag="PXB09_000733"
     CDS             20568..21515
                     /locus_tag="PXB09_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5232874.1"
                     /translation="MKKSALFTATLFGLSTLFAGSAMAKSDEIAVIVKSANSTFWQNV
                     RKGAETAGKDIGGQYKVTFQGPEAETAIDAQVNMVDNAVNRGVAGIVLAASDPVALVP
                     AVKKAYESGIPVVLIDSGINSDGKYYQSFLATDNRAAGKLAAEKLLAKVKGGKVAVMS
                     FTQGAASAIERTGGFIDEIKAKADYKLVGPYYSDSDMTKALNQTEDVLGSNPDLAAIF
                     GANEPTAVGMARAVKQKGFAGKIVAVGFDGNSDLQNFVRDGTLDGIVVQSSYQMGYKG
                     VDTIGKLIKGEKVEKVIDTGVVYVTKENIDSEEAKGVLY"
     gene            21571..21822
                     /locus_tag="PXB09_000734"
     CDS             21571..21822
                     /locus_tag="PXB09_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL5232875.1"
                     /translation="MSNTLTDKALVVIAALGGRENIVDVYACITRLRVEVKNTDIVEW
                     DKIKSVGALGVVTSGSVIQSIFGSDAEAYRDEIKRILNI"
     gene            21951..23102
                     /gene="fucO"
                     /locus_tag="PXB09_000735"
     CDS             21951..23102
                     /gene="fucO"
                     /locus_tag="PXB09_000735"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDL5232876.1"
                     /translation="MANRLILNETSYHGKGAIQNIVHEVTSRSFKKALVVTDKDLIKF
                     NVAQKVTALLDAAGLPYEIFDEVKANPAVDVIKAGVAKFKASSADYLIAIGGGSPIDS
                     AKAIGIIINNPEFSDVLSLEGVAPTHQKCVPIIAIPTTAGTAAEVTINYVITDEAKKR
                     KFVCVDVHDVPAVALVDPDMMESMPKSLAAATGMDALTHAIEGYITKAAWELTDALHL
                     KAIELIGRSLRGAVEKNPKDVEAMALGQYVAGMGFSNVGLGAVHSMAHPLSAYYDTPH
                     GIANAVLLPYVMEFNKNYTGEKYREIARAMGVKGVDEMSQEEYRNAAIAAVQQLSQDV
                     GIPPKLHQIGVKEADLAALSVDAFNDVCTGGNPRDCTAEELLEVYRIAY"
     gene            23369..24814
                     /gene="aldA"
                     /locus_tag="PXB09_000736"
     CDS             23369..24814
                     /gene="aldA"
                     /locus_tag="PXB09_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDL5232877.1"
                     /translation="MVKQHKMYINGEFVPALDGRTLAVYNPATEKAISEVPRGGADDA
                     KIAIDAAEAAQEAWERLPAIERGKYLRQIAVGIRERADEIARTISEEMGKTLSLATVE
                     VHFTADYLDYMAEWARRYEGEIIQSDRPNEHIFLYKKAIGVTTGILPWNFPFFLIARK
                     AAPALVTGNTIVIKPSEDAPNNAILFSEIVHQVGLPKGVFNVVTGYGNEVGPELSGNE
                     KIGMVSFTGSQFAGQKVMEAASKNIIKVNLELGGKAPAIVLDDADLELAATAVVNSRI
                     INSGQVCNCAERIYVQSSIKEQFVQKLVEKMQAVKYGNPLEQQDIDMGPMVNEKGLHK
                     VQEMVTHALHQGGNLVLGGNVVEGTGYYFEPTIIDNVDNSMDIMRHEIFGPVIPVATF
                     DTIDEAIRLANDCEYGLTSSVYTQNINKAMKVISRLKFGETYVNRENFEAMQGYHAGW
                     RKSGIGGADGKHGLEEYLQTQVVYLQFDDKV"
BASE COUNT         7321 a         5179 c         5232 g         7159 t
ORIGIN      
        1 acataaactc attgaactgt ttgtagcagg tgtcactgct cgaacagcgg ctgagttggt
       61 gaatgtaaac aaaaccaccg ctgcctatta ctttcaccgt ttgcgattgc tcatctatca
      121 acatagccct catctggaaa tgtttgaggg tgaaattgaa gcggacgaaa gttatttcgg
      181 tggtgctcgc aaaggtaaac gagggtgtgg tgccgcaggc aaaactgccg tatttgggct
      241 gttaaaacgt gatgacaagg tttataccgt tgtcgtacca aatacgcaat ctgccacact
      301 tttgccgatt attcgggaga aagtgaagcc agacagcctt gtttacgccg atttttatcg
      361 aagctatgat gtgcttgatg tgagtgaatt taaccatttt cgtatcaatc acagcacaca
      421 cttcgctgaa aatcacaatc acattaacgg aattgagaat ttttggagtc aagcaaaacg
      481 tcatttacgc aagtttaatg gtattccgaa agcccatttt gagctatatt tgaaagaatg
      541 cgaatggcgt tttaatcaca gtgacttaaa atctcaaata ttccttttaa aacaattggt
      601 taaagggggg ttaggttagt tatctaggac agccccaaaa ataatggcat aagtgactca
      661 cttatgccat tttttatatg ctttaacgtt tattaaaaat cttaaaaata ttgttggctt
      721 cctctaaata atgcaagatt ttccgcactc atattgccgt taccaacacc tgctacgaca
      781 ataccttgat agcctacatc taacaaggct ttagtgggcc aattttcaca atctgctcac
      841 ctttgatatt cgccaatgtt ttcatttctg gcactgcttc aattaaggtt tcgatattca
      901 attgccctgc ttgataagca ctactatttg cattctgctg actaccagca atcgttccgc
      961 ctgtcgctaa aatagtgata ttaggtaatt ctgccgcatt agctgttaca aataagccac
     1021 ctaacattgc tgctaatgct aattttttga atttcatata aggctcctta attaaaaaaa
     1081 ctaaagacag ataataccga taaatcaatg taaattattt gatctgatac ataaaagcgg
     1141 gaattaatta ctgggtagaa ataggttata tcgctatttt catttgggtt atctactcat
     1201 agaatacctt taactaaaac ataataagca gaatttacgc aaaattctcc gacagacaag
     1261 taaaaattca caatttttcg acagagatcg caaaaataca agcagtttat ttcaattata
     1321 tttccattcc caaggctcag acacaaaacc acttaccact ggattttgat gaatataatt
     1381 taacttttca tcaaagaatt tctgcgaata gatttcaata ggttggttat gatgttgcca
     1441 gaattgatat tgttttacat tacaacgtcg ttcagccgcc cgagaaaaca tccacagcaa
     1501 ccattcccga cggttttctt gcaaattatc tttaattctc tgaataagta ttttagcggt
     1561 gaatgttttg aaatctcgta ttaaatcaga aggattttga ttttctgctt gaaataataa
     1621 atggatatga gttggcataa tacaataggc atacaaaatc attcccttat gttttctgca
     1681 gtaatctaag gcatcaacaa ttacctgaaa ataaatctct ctcacaaaca caccaaccca
     1741 ataaacagtt gcaaaactga caaaataagc accgctcttt tcgtggaatt tatattttcg
     1801 gctcatagcc tttctcaact taaaaaggaa taagaaaaat accctattca aaattaaatt
     1861 ccacaagcca atataacttt ttcgatctag atcgcaaaaa tcattaaaac ttgcaaagtg
     1921 ttgataaaat ttaaccgctt gtgataagcc aaagaaatac tgaaatgata gcaatggatg
     1981 gataaataaa atgatgacgc aagcgtccac gcttgtgcca aaaacaaaag cccaaataaa
     2041 ccaaatttta cttggctgat ttaggctttt atcttatgac tgaaatactt tcagaacagg
     2101 aattaactgg cacaagcgtg gacgcttgca ccatctgggt taaatcctta tattataagg
     2161 ttttaaccta ctgtgcagac tcaattttag tcactatgcc aaataattag ttaaaggaaa
     2221 tttaagctag cttatctagg acaaccccat ttagaattta taacttgtgc taaacactat
     2281 agttctccct cttgcataat tattgagcgt ataaataggt tcatcactga tatcagaatt
     2341 gtaaaccctc tgacttgctg catcattatt agcatcaaga ggatcaatgt actttttgtc
     2401 aaagacattt tatagttcta actttaatat aagcgacttg attggttcgt agctcacgta
     2461 aaaatcaaca ataataggtt gtttatttac ggtttcttca agccgatgag tttctttcac
     2521 aatatgtgtt ccaggataat aagtatagtt aaactcatct atcgcaatac gtttactttt
     2581 tccgtaatat tttgccactc cgccaatttg tagtctttga tcaaaccatc ttgtccctaa
     2641 ctccaatgag ccatagtctc ttggtaacgc tgaaattttg ctggcaccaa aaccttgagt
     2701 tttaaaacca taatgagaag cggcatctac ccttgaactt gcatctgtaa aggatacggg
     2761 ttgattcgta ttttgacgag cataagctaa gttgccatag aaagagccta tatcataact
     2821 aaattctaat tctatccctt tgatatttac tggtttttca tagtttttgt ggaaaatgaa
     2881 taaactagga gcactaccaa cagcggtatg ttgtacatta taaatatagt tttttaagtg
     2941 agtgttataa aatagcactt taaatcctaa tttatcttct tcactaaata cccgttcttt
     3001 gaatccatta ataccaaact gtgttgtttt cgcttgctct ggttgtagtg cggtatttac
     3061 accatagtca cctaaattag agaagaatat ttctttaata ttaggggctc gatgtgtttg
     3121 agaataacta ataaagggcg tgaataaatc gtgaatataa gcagacaagg ttgctgaata
     3181 attaattcgt ttatgttttc ctgttgctgt atgaggaaaa ttgacatcag gacagttaaa
     3241 ctctcccaat tcaggatcat taggaaaatc ctcatctgga atatatgtac aatgtttttt
     3301 tgcaagttgt ctaattgaga ttgtaatgac cttaaatgct caaactgcct atttctactt
     3361 gcctgtctaa tatctgactc caattctcta atcgcaaaag gaaaatattt aaaacgctga
     3421 ccaataaacc gagcggtatt aatatttgcg tttatatcca atccccatat accatagtta
     3481 aagtgattgt cgagataaaa agtatcgaac ttctgttcgc catcaggctg gaaagttgaa
     3541 gtataaagcg atttacgaac ggctgtcatt cctacagaat cgttgttttc gctggtttcg
     3601 ccattctcta agttatagtt taattccgca ggatgtctat ttttactata gcggttcttt
     3661 aaacgattaa aacctaatat tgcttcccat tctccatctt taaacggaga cactttaaag
     3721 gtgttactca aatttaaggt tgtcgctttg ttgttaattg ccaaaccttg aattaaatat
     3781 ttattattaa ttcagctccc tttgttgtag ttttgtttgc cttgattttc cgcataggcc
     3841 acttgaacat ctaaccaagg tgactcgggc aagtgaaaac gataatttaa ctggttgttt
     3901 tggtttttta aatgtctacc cgctacctga ctttggtaat agtgtgatgg tttggtattt
     3961 atcgccatat tccaatttag ccatacgact cattggtttt tgttttaaat gagctgcatt
     4021 gaacggtgag gtggtagaac tttctttatc tagatcatca attttactaa ggtcaatcga
     4081 gctatccgta acttttcgtc cgcctcctat tttataattt tgagagattt tgcgccaact
     4141 atgcccaaat aatgctccta tccaagtaga gtcattgaat tggtatttgc cagcgagcat
     4201 tcccatataa tttgggccta ctgcattatt agctcgccca aatccagaac ctcctcgaat
     4261 attaacagaa accacacctt gagatttatc catttgtgta aatgcgccag gcatagaacg
     4321 aacaatagtc tctaagcttt ggtttgattc caagatttta tctcgggtgc ttattgcccc
     4381 tgttttaatg aaaacttcat ctgttttttt attgcttggg ctttaacctc aaccgtatct
     4441 aacatataac cttcctctgc gaatacccta ggtaaggggc agataagtgt tgtataagtc
     4501 aggtgaaata catatttttt gatcttcatt tctattgtct ttcctataaa aaatgtaatt
     4561 aaatttaaat cgcaacgcta aagacactga agaaagaagt gtgcctttat tgcacgagtc
     4621 tagtatagca caagacgaaa atattaatca tgttcaatat tataataaaa ggatacgtta
     4681 gacgattagc ataaatagaa atatgcactt aaatagagga ttataaaaat aaggggctat
     4741 cctagaaact caatttaacc aattgtttta aaaagaaaac ttgatatttt aagttactgt
     4801 gattaaaacg ccatctgcat tctttcaaat agaattcatg tactttagga acgccgttaa
     4861 atttacgcaa atagcatttt gcctgactct ccaaattctc aattccgtta atgtgatttt
     4921 gattgctaac taaaaaccac tttctattaa ggtagaattg accgttcaaa taaatcacgt
     4981 tcattttctg tataagacgt aatggggcat ttaaaagggt gaacagggtc caataagatt
     5041 tttcaataag tttccctatt tacgtaagca taaattgtgg ggcaacccac ttttgtggca
     5101 agaggctact gcgtagacac cgtagatgtc aatgcagaaa tgataagaaa gtacttgaaa
     5161 tatcaggaaa agcacgaagg ataaacaact tcgtttatca gatatataaa aattcgggtt
     5221 ctatgaattc gaattttaat cgccccctat gggggcagat cactacgaag gtagattttt
     5281 aatacttcaa cgccactctc gcatttctaa acaaccgcat ccacgctcca ccttccgtcc
     5341 aatcttctgg gcaccaagag ttactgaccg cacggaacac acgttcaggg tgtggcatca
     5401 taatagcgac tcgtccgtct gtattaccga tagcggtgat acccaacgcc gatccgttcg
     5461 ggttggctgg gtattgttcg gttgggttga ggtggctatc cacatattgt gcgatcacga
     5521 gattttgctg ttgcaagttc gctaattgct gtggattttt gaactcaact tgtccttcac
     5581 cgtgtgaaac cgcaatcggc atatggctgc ctgccattcc gttgaaccaa agtgagttgg
     5641 tgtcgttgat tttcaccatt gcagcacggg cttcaaaacg ttcggattta ttacgcacga
     5701 agcgtggcca gttttctgtg cctggaataa tttccgctag attggagacc atttggcaac
     5761 cattacatac ccctaatgcc agcgtgttcg ggttggcgaa gaatttgctg aattggtcac
     5821 gcagcattgg gttgaacaga atcgatttcg cccagccgcc gcctgcacct aagacatcgc
     5881 cgtaagagaa gcctccgcac gccaccattg cgttgaagtc gttgaggttg cgtctgcctg
     5941 aaatcaagtc tgacatatgc acgtcaatgg cgttgaaacc ggcacggtca aagacggctg
     6001 ccatttcgta gtggctgttt acaccttgct cacgcaaaat cgccacactc ggttttacgc
     6061 ctttgttgat gtatggggcg gcgatgtctt cgttcacatc gtaagttaaa aatgcggata
     6121 agcctttgtt attcgggtct tttttcgctg caaattcttg gtctgcacat tcagggttgt
     6181 ctcgcaaacg ctgcatttga tgagtgagtt ccgcccaaat gccacgcagt tcggaacgtt
     6241 tttggctaaa tactgttgtg ccgttgcggg taatttcaaa gctgtcgctt tcaaccgctg
     6301 taccaatatc aaaggtgaga tttgcaagat tttcggcatt taacaccgct tgcacctcgc
     6361 tcaattcttc ggtgcgaact tggattactg cccccagttc ttcgttgaat aacacggcta
     6421 aatcgtccac caagcggtcg atttccaccg aaattccgca attccctgca aacgccattt
     6481 ccgccagtgt ggtgattaaa ccaccgtccg agcggtcgtg gtaggcaagc aattttcctt
     6541 gtgcgacaag ggtttgcatt gcgttgaaga agccttttaa gcgagccaca ttcaccacat
     6601 cggcaggttt gtcgccaagt tgtttgtaaa cttgagcaag tgcggttgca cccaagcggt
     6661 tgttgccttc gcccaggtcg atcagcaaca agcgggtatc gcctttgtcg gtgcgaagtt
     6721 gtggggtaac ggttttacgc acatcttcca cacgagcgaa agcggaaatc acgagcgaaa
     6781 gcggagcagt aacagatttc tgttcgccgt tttcctccca agtggttttc atcgacattg
     6841 agtctttgcc taccggaatg gttatgccta attcagggca aagctcttcg cccaccgctt
     6901 ttactgcctc gtaaagccct gcgtcttcgc cctcgtgccc tgccgccgac atccaattcg
     6961 ccgagagttt aatgcgtttg atgtcgccaa tgttagtggc ggcaatattg gtgatgcttt
     7021 ctgccacggc gaggcgagct gaggcagcaa agtcaagcaa agcaacaggt gatcgctcgc
     7081 caattgacat tgcttcaccg tgatagctgt ctaatgaagc ggtggttacg gcacaatctg
     7141 ccacaggaat ttgccacggg ccgaccatct gatcttgtgc caccattccc gttactgagc
     7201 gatcgccgat ggtaatcagg aaggtttttt cagccaccgc aggcaagcgt agcacacggt
     7261 ggaacgcctc tttcaagtcg atgtcagcgg ttgcaagcgg tggatttttc acagtttttg
     7321 acaaaacatc tcgctgcatt tttggcgttt tgccgagcaa cacattcatc ggcaaatcaa
     7381 tcggtttatt gtcaaaatga gggtcagcaa gggttaaatg cttctctttc gttgcctcgc
     7441 caatcaccgc aaatggggct ctttcccttt cgcacaatgc tgtgaaaatg tcgagttttt
     7501 caggggaaac ggcaagcaca taacgctctt gcgattcgtt acaccaaatt tcaagtggcg
     7561 acattccttt ttcatcgcac aagatgttac gcaaatcaaa cttaccgcca cattcgccgt
     7621 cgtgaaccaa ttcaggcatc gcatttgata aaccgccagc ccccacgtcg tgaataaata
     7681 aaattgggtt ctccgccccc atctgccagc aacggtcgat cacctcttgg caacggcgtt
     7741 ccatttcagg gttttcccgc tgaaccgagg caaaatccaa atcttctttc gatttccccg
     7801 atgccattga cgatgccgcc ccaccgccta agccgatgtt cattgccggg ccaccaagca
     7861 cgatcaactt cgctcccacc gggatttcgc ctttttgaac gtgttcggca cgaatgttgc
     7921 cgataccgcc tgctaacata atcggcttgt gatagccacg aatttcttcg cctgcgaagc
     7981 tgttcacttt ttcttcgtaa gtacggaagt agcccaataa cgcaggacga ccaaattcat
     8041 tgttaaatgc cgctccgcct agtgggccat caatcataat atccagtgcg gaggcaatgc
     8101 gattcggctt ggaaagcggg ttttcccacg gctgttcaaa ttttgggatc actaagttag
     8161 agaccgaaaa acccgtcaag cccgctttcg gtttcgcccc acgccctgtc gccccttcat
     8221 cacgaatttc accgcccgaa ccggtcgccg ctcccgggaa tggcgagatg gcggttgggt
     8281 ggttgtgagt ttctactttc attaaaatat gagcatcttc ttgatgatag cgatattgtc
     8341 catcttggtc ggggaagaaa cgcccaaccg ttgagccctc catcaccgcc gcattgtctt
     8401 tgtaggcgga aagcacatag tccggggttt tctcaaaggt gtttttaatc atcttaaaca
     8461 gggatttttc ctgttttacc ccatcaatcg tccaatccgc attaaaaatt ttgtggcggc
     8521 aatgctccga gttggcttgg gcgaacatat agagttcaat atcattgggg ttacgcccaa
     8581 gttgggtaaa gttttccacc aagtaatcaa tttcatcgtc cgccaacgct aaacctaagt
     8641 tgatattcgc ttcttccagt gccttgcgac caccgcctaa aatatccacc gaagtaaacg
     8701 gcttcggctc ttgctgagcg aaaagctgtt cggcttggct ttcgttatcc agcaccgttt
     8761 ccatcatacg gtcgtgtaat aagcctttca acgtcgtaag ttgactttcg ttcggcgttt
     8821 cagaaaattc taaataatat gccgtgccac gctcaattcg ctctactgct gccaaaccgc
     8881 agttatgggc gatgtcggtt gccttagacg accacgagga aatcgtgccg atacgagggg
     8941 taacaatcag gcaaaaccct gtcggctcgt cttcttccag cgttggaccg tagtgcaata
     9001 actctttgat tttgttttct tcatcggcta caagcggtcg atttaatgcc acaaaatgca
     9061 aaaactccgc ataaactgat tttacaggta attgattttg ttggaatttt tgcagaagtt
     9121 gttgaatgcg aaaagcagat aaggcaggcg agccacggaa ggtttggatt gtcattcttt
     9181 ggattttcct atttaagatg aaaaactaaa ccgattataa acgattgcgc aaacgattgc
     9241 tatatttgtc agacgtttgc tgttagatac atttattcat tagtatcaaa taaatttgtt
     9301 caatactaat gaataccttt caaagaaggt cccctctatc aatctgtttt aaaagataat
     9361 ttaaaaataa gttaatttga caactcaaaa ttaaaagcag acaatgcttt taattatatc
     9421 ttaataggag cagattatgt ttaaagagaa aggctatgat gaattcctag cagaaaaaat
     9481 tcgccttggc ttagaagata tgcaatcagg taatggtctt tcactcgatg aatcaaaagc
     9541 acgaaccaaa caactgattg aacgtaaagc aagagaactc gcaaactttg aacaagagaa
     9601 tatcatttat ggctaaaaca ttacgaatta gcagtagagc tcaaaatgat attgaagaaa
     9661 ttttagcgag cgtaattgaa tatactggtt ttgaaagtag tggaattcgc ttacaagaag
     9721 atatttacca aaaatttgag actatcgctt atatgccctc tgcggctgga cgtttaagag
     9781 aagatggcac aagagaagca ttcactaggc gttatcgtat tgtttatacc gaattagaaa
     9841 atgaagtgtg gattattacc attattcata gtagcagact ttatccacgc atttaaataa
     9901 caaacgacta aaatagtcgg ttttttattt gcaaaaaatt aataaaatat caccgcttgt
     9961 aagctccata aaaaaaagcc cgattgtaac atcgggcgtt ttagtctgaa tttaagtcag
    10021 attagaatgt gtagttcaca cctgcacgga attcacgtcc acgagctgat aattgaccac
    10081 gctgaccgtg tgcgttgtat tttttattcg ccacgttatc cactgcgaag tttacattca
    10141 cgctatcatc tttaagtggt ttccagttta aggtgatatc agttacattg tagccgtctt
    10201 tgcctgtacc ggtatttgtt tgtaatgttc cgcccgtaac gaagaaatta tcttcaggtt
    10261 tcactttctc aacaatacgg tggtgtacgc caacctctaa atttggttgt tcaaagcgat
    10321 agcttaaaga agctgtccaa gtacgaccga tagctgaggc gtattctggg ttagtactta
    10381 ataatggttt ttcttcccgc ttaccagttt gtctgtttac ttcccaaata gttggtgagt
    10441 agaaacgcgg tttgctgtgt gcaacaccaa tacgagcagt aaaaccacca ttatggtaac
    10501 ctgcatttaa ctcataacca cggtttttaa ttttacctag gttcataatt aactcattat
    10561 taggattatg gctatcacga ccaccaccta atgcatcttt tatatcttgc cagaaatagc
    10621 taccatcaaa actgaatgta ccattgttat agttgaaacc gatttcagta ttacgagctt
    10681 tctccgcttt agtattgcta ccaatactaa cgatttttct atttccgtga gccgttagtg
    10741 catcgtataa acgagggcta cgagttgcat agttgtggct tgcacttaag cttaaatgtt
    10801 caattggctc atagataagc ccaacgcttg ggctgaatgc accattacta cgctctttac
    10861 catccattgc tttgaatttg aagtggtcgt aacgtacacc ggtagttaaa gttactttat
    10921 ctactggagc agtaattgct tcaacataca cgccggtatc ggttttctct tggtttttca
    10981 caagagggtt aaatttagtg tgtggtttag cttcttggtg gcgatagttc acaccgtatt
    11041 ttaataatac attttcgtga agggcagaat caaagtttac gtttgcaccg tgggttacta
    11101 ttttagtttt ggttgcataa tctacaccac cagcataacc attacctgtt tcattctcag
    11161 accaacgacc ttgtactaac tgatacacgt tagctgttgc ttcttgagca aaacctaagt
    11221 ttttaccagt ccattctaag ttagttcttt gaaccgtaat tctacggtta gctggagctt
    11281 ggcgttctac agttaagcgg ttgtacggag aaacctttgt gccgttaggt gctacatcaa
    11341 attcttcacg cactaaacgc tgaccttcat ttcgctcact tgaatggctt aatacaaaac
    11401 ggtgatctcc caatgttgca cctaatttag ctaaaaagct ggttttatct agtgcactat
    11461 acggaacacg gtttgtgccg aattggttta cgtaatcttt accgccttta tagtcgcgat
    11521 ctctcacaag attacctgag actaaagcat caaagatttc gcctttacca tataaggttg
    11581 cattgaaatt gtgagcgtgg tttgtgctga agccagtacc taattttgca ccgaagtttt
    11641 tatcgctgtt ttttaataaa tctaatgcat caacggtttt agcaattact gcaccattag
    11701 tttgaccaat accggctgaa gcactgcctg cacctttttg tacagaaaca attttcacca
    11761 atgccggatc taacatatga cgaccttggt gatacaaaat ttggctatct gagtaagtgt
    11821 tatctacttt tacatcaatt gagttttgac ccataccacg aatatagaga tattgtgatg
    11881 taccgttacc accacctaag ctaattgccg gctcatcttt taataaacca cgcaaatcgg
    11941 tttgggtgct ttcatctttt ttcttagttg ttaccacatt gctttgtact tttaaacctt
    12001 gattatctgt tacggtaaca gtatctaata ctactgcatc tgttgaagca gtttgagcca
    12061 ctgcattagc agcaagtacg ctcaataccg cagcagaaac agggagcaat ttgaagcttt
    12121 tcattttatt tatattcctt aggtaaatta tttaagagga ttatctgttt gatattaaaa
    12181 ataattctca acaccaaacg ttcgcaaatt ttacagagat aaaaatgatt gtcaattagt
    12241 ctgaaatgaa atttcacaaa atatattaca aattttacaa aaagttccct aaatttaacc
    12301 gcttgcaaca caaaatgtga tcgccttcta aaaatcaaat ttgcttgctc gacagtaacg
    12361 ctacaagcgg ttaaatttgg agaaaaattt acaaaaagga tagattatgc agctgcgaca
    12421 caaacagata atggaatata tacaacagtt tgatgaagct aacgttcaag aattggcgga
    12481 acattgtggg gtttcgattg aaactatccg ccgagattta aataagctag ataaagatgg
    12541 attattacat cgcactcacg gtggagctgt gagccataaa aagcgagata ttggtcgctc
    12601 atttaccacc cgacaacggc tgaacagtga ggcgaaacgc agtatcgcag aaaatgtgtt
    12661 ggaatattta caaccagaat cggtgattgc tttagatgcc agctcaacct cttggaatgt
    12721 ggcacagcgt attccaaata ttccttgcac cgttgtcagc agttcaatgc ggattatcta
    12781 cagcctttca cacaaaccgc acattaaaac gattgccacc ggtggtattt attccgaaaa
    12841 atacgatgcc ttctatggtc cattatccga gcagttactg acccgtttaa aaattgatct
    12901 tgccattctt tcttgtacag gcattgccga tggggcgatt tgggaatcaa atgaaattaa
    12961 tatttccctt aaacgtaaat taattgcgaa cagtaaacag gtttttttat tagccgatca
    13021 cagtaaattt gagcgtaaag acttgtttcg tatcgaagat ttatcttgca ttgataaatt
    13081 atttatcaac caacccccac cggactttct caaaaattat tgcttagcac atcaaattga
    13141 aatcattatt tagtgatttc tgcccgattt tattcagaaa taaaacaaat cgggcattct
    13201 tttttcactc atttttacca aaatccccca ttttttgtga tcgcactcac aaaatttaaa
    13261 ctaaattcgc atttttcttc ataactcata ttgcgtatgc ataataaatt caatcgcaaa
    13321 tttttttaac caatcgggag aactatttat gacaacgttg aaatctaccc ctgtaaaaat
    13381 tggtatccgc ccaaccattg acggtcgccg tttaggagtg cgtgaatcac ttgaagatca
    13441 aacaatgaat atggcaaaag ccgttgcaca attaattcaa tctgaagtcc gccacccaaa
    13501 tggtgatttc gttgaatgtg tgattgctga ttccaccatc ggtggtgttg ccgaagctgc
    13561 ggcttgtgca gaaaaattca aacgtgaaaa tgtcggagcg gtgattaccg taaccccttg
    13621 ctggtgctac ggttctgaaa ccattgatat ggacccacat atgccgaaag ccatttgggg
    13681 ctttaacgga acagaacgcc caggtgcagt ttatttagct gctgctttag caggtcatag
    13741 ccaattaggt ttaccggcat tctccattta tggcacagaa gtacaagaag ctgacgatca
    13801 atctattcca gacgatgtgc gtgaaaaatt actccacttt gcccgtgccg gcttagcagt
    13861 ggcaacctta cgaggaaaat catatttatc tatcggctct gtttcaatgg gtattgccgg
    13921 ttctatcgta aaccaacaat tcttccaaga atatttgggt atgcgtaacg aatatgtgga
    13981 tatgaccgaa attaaacgcc gtttagatcg ccatatttac gatgccgaag aatttaaatt
    14041 agcaatgagc tgggtgaaaa cctattgcaa agaaggtatt gatgtcaacg caccggaaaa
    14101 tcaacgcagc ccggaagagc gtgaaaaact ctgggaagac gtggtgaaaa tgaccattat
    14161 tgcccgtgat ttaatggtgg gtaatcctcg cttagcagag ctaggctata gtgaagaagc
    14221 cttagggcat aatgcgattg ctgccggttt ccaagggcaa cgccaatgga cagaccattt
    14281 gccaaacggc gattttatgg aagctacctt gaattcgacc tatgactgga acggcgttcg
    14341 cgcaccatac attatggcaa ctgaaaacga cagcttaaat ggcgtgaata tgttgttcgg
    14401 taacttatta accggtcagg cacaaatctt tgccgatgtg cggacatact ggagcgaaga
    14461 ctcggtagaa cgtgtcaccg gctggcgtcc ggaaagcggt tttatccact taatcaactc
    14521 cggctctgcg gcgttagacg gaacaggtca gcataccgat agagcaggca aaccaactat
    14581 taaaccggct tgggaagtga ctgaagaaga cggtaaacgt tgtttagaaa acacctgttg
    14641 gtgtccggca gttcacgaat atttccgtgg tggtttatct tcccaattct taaccaaagg
    14701 tggaatgccg tttacgatgc accgtatcaa cctgatcaaa ggtatcgggc cggttttaca
    14761 aattgccgaa ggttggtcta tcgacttgcc ggaaaatgta cacgacattt taaacaaacg
    14821 cgccaatgaa acctggccga ccacttggtt cgtacctcgc ttaaccggaa aaggcgcatt
    14881 taccgatgtg tatagcgtaa tggcgaactg gggtgcaaac cactgtgtgg caaccttcgg
    14941 acacgttggg gcagacttaa ttaccctcgc ctcaatgctc cgcattccgg tttgtgtgca
    15001 caatgtggaa gataaagacg tattccgccc aagtgcgtgg aacggtttcg gtcaagacaa
    15061 agaaggtcaa gactaccgtg cttgtgctaa cttcggacca ttatataaat aatacacaat
    15121 caccctctcc ccttgtggga gagggacagc caagcaattc gttcagaatt gaatggcagg
    15181 gagagggcta caagcggtcg cttttctctc aaaatttaca aatccctctc tctgattaaa
    15241 ttgctaaacg caatttaatc tatctctcta aaagggagat attaggataa gtaaaggaga
    15301 taacaatgcc aatttctctt attttcgact gtggtgccac caacctccgt acgattgcga
    15361 ttaatcaagc gggtgaaatt gtggcagccc atcatctacc gaataacaca caaccagatg
    15421 tggaaagccc agaatttcat atttgggata ttgaagagat ctggtcgaaa ttaatgacct
    15481 gtgccaaaca gacgctttct caactttcag aacaacaacg gcaagagatt gttgggattt
    15541 cagtaaccac ctttggcgtg gacggtgcat tatttgacaa aaacggcaag cagctttatc
    15601 cgatcatttc ttggaaatgc ccgagaaccc taccgattat ggaaaacctt gccaattatc
    15661 ttgatgttga ggcgttatat caacgtaatg gcgttggaca ttatagtttc aacaccttat
    15721 tcaaattatt gtggttaaaa gagaacaaac cagaaattta tcaacaagct gagagtttct
    15781 tattcatctc atctattttg acttaccttc ttacaggcgt gcaaacaacc gaccgcacaa
    15841 tggcgggaac gtcaatgatg acaaacatcg aaaacgattc gtgggataaa acagttttag
    15901 atttattagg cttaaccgaa aaccattttc ctccaatgaa aagtgcagga gaagttgtgg
    15961 gaacattaaa aggagaaatt tcccaagagt taggtttaag cggtcaaatt ccagtaattt
    16021 cttgcggaca cgatactcaa tttgccattt ttggctcagg agctggctat aaccaacctg
    16081 tgttaagttc aggcacttgg gaaattttaa tggttcgtac cccaaaagca aaaccacaat
    16141 ggcaattcgt tcaaaacggc ttaaccattg agtttgatag ccaatctggt tatttcaacc
    16201 caggtgtgca gtgggtagct tcaggtgtga tggagtggtt tggcaaacgt ttcttctctg
    16261 atatagccaa tactgaacat tactaccgca caatgattga agaagcggca gaagtgcctg
    16321 ctggctcaaa cggtgtgaaa ttagtcggca attttgatgg cacaacagct aaaacaggtt
    16381 caattatcgg cttatctatg cacatcactc gtggcgaaat ttaccgtgca ggcttggaat
    16441 atatggctca tcgtctaaaa gaagggttag atgtattaca agaagtcggt cattttaatg
    16501 ctgagagttt gatttgtgtg ggaggtggtt ctaaaaacgc tttatggaat caaattcgag
    16561 ccgatgtctt aaatagaccg attgatgtag tggatttccc tgaaagtacc gtattaggcg
    16621 cggcaatgtt tacttttaca ggtgctggtg tatttgaaaa tccaaatgcg gctcaacagg
    16681 caatgaagcc aaatgtgaaa cgggttgagc catcgtcaaa tagtcaattt tataaataaa
    16741 gtttctcccc tctctctgat ttgaggttca ttcagaacat caaatcagag agagggtaaa
    16801 aaaggagttc aaaatgttaa aaggtattca cccggcaatt tctccagatt tattaaaagt
    16861 cttagccgaa atggggcacg gcgatgaatt agtgctttct gatgcacact tccctgctca
    16921 ctctattcat caaaacgtca ttcgtgcaga tggcttaagt gttgccacct tattagaagg
    16981 catttctgct ctgtttgaat ttgaccaata cgttgaagcc ccacttgcaa tgatgcaagc
    17041 agtaaaaggc gacacgctcg atccaagcgt tgaagagcgt tacctcaatg caattaaaaa
    17101 agtaaacgga acagccccga aaatagagcg tgtagaacgc ttcgctttct atgatagagc
    17161 caaaaacgct tatgccgttg tcattacagg cgagttagcc aaatacggca acattattat
    17221 caaaaaaggc gtaacaccgg tttaattaca agcggttaaa aaagcagaat tttttacaaa
    17281 tataaaatta aaaggagttc aacaatggac agaaaaatac tggcgagaca aatcattgat
    17341 acttgtcttg aaatgacccg aattgggtta aatcaaggta cagcaggcaa tgtgagcgta
    17401 cgttataaag acggtatgct cattacgcca acaggtacac cttatgagca aatgaccgaa
    17461 gattctatcg tctttgttga tggcaacggc aaacacgaag agggaaaact cccttcaagt
    17521 gagtggcagt tccatttagc ggtttatgag gctcgccctg aattaaatgc ggtagttcac
    17581 aaccacgcta aaaactgtgc cgcagtgtct attttaggtg aacctatccc tgccattcac
    17641 tatatgatcg cctgcaccgg cactaatcac attccttgtg taccttatgc cccgttcggc
    17701 actcaccaat tagccgacta tgtacgtgaa ggcattaaac acagcaaagc aattttactc
    17761 gctcaccacg gcttaatcac cgcagataaa accctcgaaa aagccctcgg catcgcccac
    17821 gaggtggaag tgatcgcaga atggtatttg aaactgctcg ctacaggaaa acctatccca
    17881 acgctaaaca aagaacaaat ggatatcgta ctcggaaaat ttaagtccta tggttcttgg
    17941 gtggaaagcg aacaatagcc tgccataaat aacatacaag cggtgatatt tcttaaaatt
    18001 tttacaaacg gagtgcagta tgcaaaatga agtaatactc acgatgaaaa acatcagtaa
    18061 atcctttgcg ggggtcaatg cgttaaaagg tgttgagctt acgctgcgta agggcgaagt
    18121 tcacgcatta atgggcgaaa acggtgcagg taaatccacc ttgatgaaat gcttgctggg
    18181 cgtatatcaa gccgatgaag gtgaaatcat atataaaggt cagcctgttc gctttgagtc
    18241 ggtattagag gcacaaaaag cgggcattag tatgattttc caagaactga acctcattcc
    18301 ccatttaacg gtggcagaga atattttctt cgcccgtgag ccactcaaac acggtttagt
    18361 ggataaagac aaaatggtgg aagaatcggc taaattgctg aatttctttg agattgatgt
    18421 tgatccaaac gatgaagtga gaatgttgtc ggtagccaaa caacagatgg tagaaattgc
    18481 caaagccctt tcatttgatg tggaagtact gattatggac gagccgacct ccgctcttac
    18541 cgaaaaagag atcgataaat tatttgaatt ggtcgataga ctgcgtgcca aaggggtgag
    18601 cattgtctat atttctcacc gaatggaaga attaaaacgt atctgtaacc atattacgat
    18661 tttccgtgat ggcacctatg tatctaacca taaattcaat gaaatcacga tggatgagat
    18721 cattaccaaa atggttgggc gttcattgga taaccatttc ccaccaaaaa ccgctgtggt
    18781 gacaaacgac attatcctct cgattatgaa tgctgaacgt aagggagtgt ttgaaccatt
    18841 gaactttgac ttacgcaaag gagaaattct gggcattacc ggcttggttg gagcaaaacg
    18901 tactgaactg gctcgagcca tcttcggagc agacccactt gatagcggtg agatttttgt
    18961 gcacgagaac aaagtcagca ttaaagatcc gagtgatgca attaaagccg gtatagccta
    19021 tttgtcggaa gaccgtaagc tcaatggtgt tgcagtaaga atgtcgattc gtgagaatat
    19081 cacgatggca tctatggata aagttgccaa tcaaataggt gtgatttctt acgatgaaga
    19141 agaaaaagcc tcaaaaactt tcatcgacaa aatggaaatc aaaaccccaa cgattgagca
    19201 gaaagttcaa aacttaagtg gtggtaacca acaaaaagtg gtaattggta aatggttatt
    19261 ccgtgaagca aaagtgatga tttttgatga gccgactcgg ggaattgatg tcggagcaaa
    19321 atatgctatc tatcaactgc tcgatgagct tgctgccaat ggcgtgggtg ttatcgtgat
    19381 ctcttccgaa ttgcctgaag tcttgggagt ttccgaccgc atcattgtaa tgcgtgaagg
    19441 tagaatgaca ggtatgctcg agactaaaaa aaccaaccaa gaagaaatta tgcattatgc
    19501 aactggtgtt aaaaatatgt ttgctcgtga atatggggtg gaaaaatgaa tgaaaaacaa
    19561 aaagaaatgt taagaaaaat ggctgcattg gctggcttag tactattaat catctttttc
    19621 agcgtaacca atgaatactt ctttacctcc aataacatta tgacagtagg gctacaaacc
    19681 tctaccattg cgttaattgg tattggggca acctgtgtga tcttaaccgg tggaattgat
    19741 ttaagtaccg gttcagtagt tgcactctcc ggtgtggcag ctgcaatgat tgtaaatgcc
    19801 ggtgtacccg taccactagg aatgatttta gggattttgg tcggcggtat ttgtggctta
    19861 atcaacggca ttttagtcac cagaatgaaa ttgcctccgt ttattgctac cctcggtatg
    19921 atgatggttg cccgtggttt agcattgtat gttaccaatg ccgcaccagt ttccggaatg
    19981 cctgaatcct ttgccaatct cggtaacgga gcattattta aaattgtgga agaaggggca
    20041 aacggcttgc cgaaagtggt atttgcaggt attccttacc ctgtgattat tatgatcttt
    20101 attaccgtac tattcacttt cgctctctct aaactgaaag tcggacgcta tctttacgca
    20161 attggttcta acgaagaagc cgcacgctta tccggcatta aaaccaatat tgtcaaaatc
    20221 tatgcctatg ttgccagtgg cttactctct ggtttaactg gcgttatcct tgcctcccgc
    20281 ctcgtcaccg cccagccaaa cggtggggtc tcttacgagc tggatgcgat tgccagtgct
    20341 gtggtgggcg gcacatcgct tatgggcggt gtgggtacta tccccggcac actcatcggg
    20401 tcattcatta tcggggtact ccgtaatggt ttgaatatga atggcgtttc ttcatttgtt
    20461 caaatgattg tcatcgggct tgtgattatc gtggcggtct ctctcgacca gctccgccaa
    20521 tccaaaaaag ccggtaaaaa ataatccact cttaaaggag aattaaaatg aaaaaatcag
    20581 cattatttac tgcgaccctc tttggtttat cgaccttatt tgcaggcagt gcaatggcaa
    20641 aatctgatga aatcgctgtg attgtgaaat ctgccaactc taccttctgg caaaacgtgc
    20701 gtaaaggggc tgaaactgcc ggcaaagata ttggaggaca atacaaagtc accttccaag
    20761 ggccggaagc cgaaacagcg attgacgccc aagtgaatat ggtggacaac gccgtaaacc
    20821 gtggcgtggc aggcatcgta ctggctgcct cagacccggt agcattagtg ccggcggtga
    20881 aaaaagctta tgagagtggc attccggtgg tgcttatcga ttccggcatc aacagtgacg
    20941 gcaaatacta ccaatctttc cttgccaccg acaaccgtgc agcaggtaaa ttagcagcgg
    21001 aaaaactgct tgccaaagtc aaaggcggca aagtggcagt gatgagcttt acccaagggg
    21061 cagcatcagc gattgagcgt accggtggtt ttattgacga aatcaaagca aaagccgatt
    21121 acaaactggt cggcccgtac tactccgatt cggatatgac caaagcgtta aaccaaaccg
    21181 aagacgtatt aggttctaac cctgatcttg cagcgatctt cggggcgaac gaaccgactg
    21241 cggtaggaat ggcacgagcg gtgaaacaaa aaggctttgc cggcaaaatt gtagcggtgg
    21301 gctttgatgg aaactccgac ctacaaaact tcgtgcgtga cggaacacta gacggcatcg
    21361 tggtgcaatc ttcctaccaa atgggctata aaggcgtgga caccatcggc aagctgatta
    21421 aaggcgagaa agtcgaaaaa gtgattgata ccggggtggt ttatgtcacg aaagaaaaca
    21481 ttgatagcga agaagcgaaa ggtgttcttt actaacattc aagttaaacg gggtggggtt
    21541 gcccaccctt tcagccgaaa ggaagccaat atgtcaaata cccttaccga taaagcctta
    21601 gtggtgattg ccgcacttgg cggtcgagaa aatattgtcg atgtttacgc ctgtattacc
    21661 cgcctacgtg tggaggtgaa aaataccgac attgtggaat gggataaaat taaatctgtc
    21721 ggtgcgttag gcgttgtgac ctcaggctca gttattcaat ctatttttgg tagcgatgcc
    21781 gaagcctacc gtgatgaaat caaacgtatt ttgaatattt agcctaagca cactcacaac
    21841 aaaagaatcg caacaagcgg tgaaattttt atcaaaattt gcaaaaaaat gacgtaattt
    21901 gaccgcttgc aagttaatcg aattgtttaa cttttaagaa ggaaaatagt atggcaaatc
    21961 gtcttatcct caatgaaacc agttaccacg gcaaaggagc aatccaaaat attgttcacg
    22021 aagtgaccag ccggagtttc aaaaaagccc ttgtggtaac agacaaagac ctgatcaaat
    22081 ttaacgttgc ccaaaaagtc accgccttgc ttgatgccgc aggcttgcct tatgagattt
    22141 tcgatgaggt caaagccaac ccggcagtcg atgtgatcaa agcgggggtc gcaaaattca
    22201 aagcctccag tgccgattat ttaattgcga ttggtggcgg ctcaccgatt gatagtgcca
    22261 aagcgattgg tattatcatc aataaccctg agtttagcga tgtactttca ttggaaggtg
    22321 tcgccccaac ccaccaaaaa tgtgtgccga ttatcgccat tccaactacc gcaggtacag
    22381 ccgcagaagt cacgattaac tatgtcatta ccgatgaagc gaaaaaacgc aaatttgtgt
    22441 gcgtggacgt tcacgatgtg ccggcagtgg cgttagtcga tccagatatg atggaatcta
    22501 tgccgaaaag cttggctgcc gcaaccggta tggacgctct cacccacgcc attgaaggct
    22561 acattaccaa agcggcgtgg gaattaaccg atgctctaca ccttaaagcg attgagctga
    22621 tcggccgttc attgcgtggt gcagtggaga aaaatccgaa agatgtcgag gcaatggcat
    22681 tgggacaata tgtggctgga atgggcttct ccaacgttgg gcttggcgcg gttcacagta
    22741 tggcacaccc gctttctgcc tattacgaca ccccacacgg cattgccaac gcagtattac
    22801 tgccgtatgt gatggaattt aataaaaatt acaccggcga aaaataccgt gaaattgccc
    22861 gagcaatggg ggtaaaaggc gtagatgaaa tgagccaaga agagtaccgc aacgccgcca
    22921 ttgctgccgt acaacagctt tcacaagatg tcggcattcc gccaaaactg catcaaatcg
    22981 gcgttaaaga agccgattta gcggcattat cggtcgatgc ctttaatgat gtctgcaccg
    23041 gtggcaaccc gagagattgt acggctgagg agctgttgga ggtatatcgg atcgcatact
    23101 aagttctatc tttgttaaat agacaagcgg tgatttttta ataaaaattt gcaatttctg
    23161 ttaaaaaaat actgatagtc ataatgcccg atttctcata tttatggaaa aatcgggcat
    23221 tttcgttgct tttttatcgc caagaaatgt gattttgttc acatttatat ctataaatta
    23281 acaaaaataa aacaatttgt ttgcaaaggc ggttcagtta ccgaatgata gtcatcaact
    23341 tccactgtgg ataaaaaagg agcaactcat ggtgaaacaa cataaaatgt atattaatgg
    23401 tgaatttgtg cctgcgttag atggtcgcac tttagcagtc tataaccctg ccaccgaaaa
    23461 agctatctcc gaagtccctc gtggcggagc tgatgatgcc aaaatcgcta tcgatgctgc
    23521 tgaagccgcc caagaagctt gggaacgttt accagcgatt gaacgaggaa aatatttacg
    23581 tcaaattgct gtggggattc gtgagcgtgc cgatgaaatt gctcgcacta tttccgaaga
    23641 aatgggtaaa actctgtcct tagcaaccgt tgaggtacat tttaccgctg actacttaga
    23701 ctatatggca gaatgggcga gacgttatga aggggaaatt atccaaagtg atcgcccaaa
    23761 tgaacatatt ttcctataca aaaaagcgat tggcgtcacc accggcattt taccttggaa
    23821 cttcccgttc ttcctcattg cccgtaaagc ggctccggca ttagtaacag gtaatactat
    23881 tgtgattaaa ccgagtgaag atgcacctaa taatgcgatt ctcttttcgg aaatcgtgca
    23941 tcaagtcggt ttacctaagg gggtatttaa tgtcgtcacc ggctatggca atgaagtcgg
    24001 gccggaactt tcaggcaatg aaaaaatcgg tatggtttcc tttaccggta gccagtttgc
    24061 cggacaaaaa gtgatggaag ccgccagcaa gaatatcatt aaagtcaatt tggaattggg
    24121 cggaaaagca ccggctatcg tattagacga tgcagatctt gagcttgctg ctaccgctgt
    24181 agtaaattct cgaatcatca attcaggaca ggtttgtaac tgtgcagaac gcatttatgt
    24241 acagagttca attaaagagc aatttgtcca aaaattggta gagaaaatgc aagcggtgaa
    24301 atatggtaat ccattagaac aacaagacat tgatatgggg ccgatggtaa atgaaaaagg
    24361 cttgcataaa gtgcaggaaa tggtgacaca cgcactgcat caaggaggta atctggtatt
    24421 aggtggtaac gtggttgaag gaacaggcta ctactttgag ccaactatta tcgacaatgt
    24481 agataactct atggatatta tgcgtcacga aatttttggt ccggtcattc cggttgcgac
    24541 atttgatacc attgatgaag cgattcgctt agccaatgat tgtgaatatg gcttaacctc
    24601 ttcggtttac acgcaaaata tcaataaagc gatgaaagta atttcccgct taaaattcgg
    24661 agaaacttat gtaaaccgtg aaaactttga agcaatgcaa ggctaccacg ccggttggcg
    24721 taaatcgggt attggcggtg ctgacggtaa gcacggctta gaggaatacc tacaaactca
    24781 ggtggtttat ctgcaatttg atgataaagt atagattctt ctaaaaactc ccacttatca
    24841 aaataagcgg gagttttctt ttaggttaac cttgtatcaa aattgcaaac a
//
LOCUS       DANLTI010000023        24382 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.023, whole genome shotgun sequence.
ACCESSION   DANLTI010000023 DANLTI010000000
VERSION     DANLTI010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24382
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.023"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1234
                     /gene="nadR"
                     /locus_tag="PXB09_000737"
     CDS             <1..1234
                     /gene="nadR"
                     /locus_tag="PXB09_000737"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDL5232878.1"
                     /translation="KLKVNDICEQAGVTRAYFNQLVSGKIKNPSANKLKALHSVLDIV
                     EDSNQRSGVIFGKFYPIHTGHINMIYEAFSKVDVLHVIVCTDSERDLRLFQESKMKRM
                     PTNEDRLRWVQQIFKYQQKQIFIHHLVEDGIPSYPNGWEDWSGRVKALFEEKSINPTI
                     VFSSEIQDKESYEKYLNLEVQLVDPTRESFNISATQIRNNPFQYWRFIPKEVRPFFVK
                     TIAILGGESSGKSVLVSKLANVFNTTSAWEYGREFVFEQLGGNEQAMQYSDYPQMVLG
                     HQRYVDYAMKHAHKVAIIDTDYITTQAFCIQYEGKAHPFLDSMIREYPFDVTILLSNN
                     TKWVADGLRSLGSKKQRQQFQHLLKKLLEKHHIPYIKIESPSYLDRYNQAKEVVEAIL
                     NEEPIPLQFKQYNIHEFE"
     gene            1252..1944
                     /locus_tag="PXB09_000738"
     CDS             1252..1944
                     /locus_tag="PXB09_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5232879.1"
                     /translation="MILFAGDPHGSYEHLYPILQQQTEEVALVILGDLQLTTPDELDR
                     LSQYCDIWFIHGNHDSKTVAAFDAIWNSSWKERNIHGKVVDIQGIKIAGIGGVFRGHI
                     WMPPNRPMFFDPIHFCQYSAPEKIWRGGIPLRHRSSIFPSDFEALENEKADILITHEA
                     PKPHPQGFSVINQLARKLGASKIFHGHYHDNFNYGNLNVSRECAIYNIGFRSLADING
                     NYLILGVDDREK"
     gene            2077..2799
                     /gene="arcA"
                     /locus_tag="PXB09_000739"
     CDS             2077..2799
                     /gene="arcA"
                     /locus_tag="PXB09_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDL5232880.1"
                     /translation="MKIPQILIVEDELVTRNMLKSIFEGEGYQVFQASNGEEMHSVLS
                     TNEINLVLMDINLPGKNGLILAREIRENMKLPLMFLTGRDNEIDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLQRTMIDKENDVVKEQSEIESYRFNGWILDINSHSLISPEGEV
                     NKLPRSEFRALLHFCQHPGKIQTREDLLKKMTGRELKPHDRTVDVTIRRIRKHFEDHP
                     NTPEIIVTIHGEGYRFCGNIEP"
     gene            2819..3337
                     /locus_tag="PXB09_000740"
     CDS             2819..3337
                     /locus_tag="PXB09_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDL5232881.1"
                     /translation="MKKLTIVALTCLFSTHLLAAPVGNTFTGIGVGVDVTTTKYKVEG
                     VKGKDSTGPALVVDYGIEQGNNFVGVVQGKAKVGSTKVFSDVKQKNKYTIAYQQGYRV
                     GSDLLPYVKVDASSSKIGNETYRGFGFGAGAKYAVSSDVELGAEYTRDNLKRSGTKLK
                     GNAFTANATYRF"
     gene            complement(3415..4644)
                     /gene="serA"
                     /locus_tag="PXB09_000741"
     CDS             complement(3415..4644)
                     /gene="serA"
                     /locus_tag="PXB09_000741"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDL5232882.1"
                     /translation="MAKISLDKSKIKFLLLEGVHQNAIDVLLAAGYTNIEVHKKALDG
                     QELIDAIKDAHFVGIRSRTFLTEEVLAQAPKLIAIGCFCIGTNQVDLNAAKRRGIPVF
                     NAPFSNTRSVAELVLAEMILLMRKVPTANAEVHRGVWNKSAAGANEVRGKKLGIVGYG
                     HIGSQLSILAEAIGMQVYFYDVENKLPLGNAQQVPTLEHLLSTCDMISLHVPEIDSTK
                     NLMSAERIAQLKEGSVLINAARGTVVDLDALAARIEDGSLRGAAIDVFPEEPASINDP
                     FVSPLCKFDNVILTPHIGGSTSEAQANIGTEVANKFVKYSDNGSTVTAVNFPEVSLPL
                     HTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYVVIDVESDNVDEA
                     LQRLKAIEGTIRARVLY"
     gene            complement(4681..5340)
                     /gene="rpiA"
                     /locus_tag="PXB09_000742"
     CDS             complement(4681..5340)
                     /gene="rpiA"
                     /locus_tag="PXB09_000742"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDL5232883.1"
                     /translation="MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKD
                     EIKGAVAASKASEQRLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTR
                     EKIVSSLAKKFICIVDKSKQVDVLGSTFPLPVEVIPMARSYVARQLVALGGSPEYREG
                     VVTDNGNVILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL
                     E"
     gene            complement(5485..6819)
                     /gene="glmM"
                     /locus_tag="PXB09_000743"
     CDS             complement(5485..6819)
                     /gene="glmM"
                     /locus_tag="PXB09_000743"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDL5232884.1"
                     /translation="MARKYFGTDGVRGEVGKFPITPEFALKLGWAAGKVLATQGTKKV
                     LIGKDTRISGYMLESALEAGLTAAGLSAVFVGPMPTPAIAYLTRTFRAEAGIVISASH
                     NPYYDNGIKFFSSVGEKLPDEIEEAIEAMLDKPMDCVDSANLGRASRINDAAGRYIEF
                     CKGTFPSELSLEGYKIVVDCANGATYHIAPNVMRELGAEVLEIGTKPDGLNINEKCGA
                     TDIKALQKVVVEAGADVGLAYDGDGDRLIMVDHLGNKVDGDQILFILAREALRSGKLQ
                     GGVVGTLMSNMSLELALKELAIPFSRANVGDRYVLEQLKEKGWKLGGENSGHIIVLDK
                     NTTGDGIIASLQVLAAMASHKLSLNDLAKAVPLFPQVLLNVRFEKGAANPLESNEVKA
                     VAADVEKRLAGKGRILLRKSGTEPLIRVMVECEDAVLAQSCAEEIVEAVKRN"
     gene            complement(6845..8377)
                     /gene="ilvA"
                     /locus_tag="PXB09_000744"
     CDS             complement(6845..8377)
                     /gene="ilvA"
                     /locus_tag="PXB09_000744"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDL5232885.1"
                     /translation="MMNETQHSQSAIDYLRSILSSNIYDLAQVTPLQKMEKLSERLGN
                     SIFIKREDRQPVHSFKLRGAFAMISNLSKAQKEAGVIAASAGNHAQGVALSAKHLGLR
                     ALIVMPQNTPAIKVDAVRGYGGEVLLYGANFDEAKAKAIELSTELGMTFIHPFDSPAV
                     IAGQGTIGLELVQQKPDLDYVFIPVGGGGLIAGIAVLIKQVMPNIKVIGVESKDSACL
                     YHALKQGQPTDLERVGLFADGIAVKRIGDETFRLCQQYVDDVVLVDNDEICASMKLIF
                     ENVRAISEPSGATSLAGLKKYVKEHQLQDKNLACILSGANVNFHTLRFVSERCEIGEK
                     REALLAVTIAEQKGSFLKFCEILGNRAVTEFNYRHSDDKQACIFVGVRISGSAEKVEI
                     IKDLQQNGYDVADLSDDDIAKTHIRYMVGGRASSIQYEQLYSFEFPEQKGALLKFLQM
                     LTNWDISLFHYRAHGADYGDILAAFALNRGDEVELNRHLEQLGYRFQNVSESPAYQYF
                     LK"
     gene            complement(8638..9231)
                     /gene="slyD"
                     /locus_tag="PXB09_000745"
     CDS             complement(8638..9231)
                     /gene="slyD"
                     /locus_tag="PXB09_000745"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5232886.1"
                     /translation="MNITKDLVPSIAYQVRTQEGVLVDEAPVNQPLEYLHGHNNLVEG
                     LEKALEGKAVGDVFEVRVKPEEGYGEYNDNMVQRVPKDVFMGVDELEVGMRFIADTDL
                     GPLPVVITEVDGDEVVVDGNHMLAGQELLFSVEVVGIREATAEEIAHGHVHGGHEHGC
                     GCGGHDHHHDHDGCCGGHDHDHHHHHGHGGCGCGGHH"
     gene            complement(9334..9474)
                     /locus_tag="PXB09_000746"
     CDS             complement(9334..9474)
                     /locus_tag="PXB09_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232887.1"
                     /translation="MKKLIKVCGLISATIFLSGCLVTSVVGGVVGTAVDVVDTVTPDI
                     ID"
     gene            complement(9546..10232)
                     /gene="aqpZ"
                     /locus_tag="PXB09_000747"
     CDS             complement(9546..10232)
                     /gene="aqpZ"
                     /locus_tag="PXB09_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDL5232888.1"
                     /translation="MKKYFAEFFGTFWLVFGGCGSAVLAAGIPELGIGYAGVSLAFGL
                     TVLTMAYAVGHISGGHFNPAVSIGLLVGGRFNAKDLVPYIIAQVIGAIAAGAVLYTIA
                     SGVPTFDATAGFAGNGYGEHSPHGYSLTAALLIEVVLTAFFLIIIMGATDKRAPAGFA
                     PIAIGLALTLIHLISIPVTNTSVNPARSTGVALFQGSWAIEQLWLFWVAPIVGAIIGA
                     VVYRFIAEEK"
     gene            complement(10420..11139)
                     /locus_tag="PXB09_000748"
     CDS             complement(10420..11139)
                     /locus_tag="PXB09_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253715.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDL5232889.1"
                     /translation="MKLKNFLTILPLAVATAVTSAETHTVEHKDKPASFNFSTEVSRT
                     VEKDVMQASVYSQKSGNSLPELKKFVSENLNRVLAEAKKHPSIEVQAEGVTNHVNYNN
                     KGNIDGWDTSGSIQLKSKDFDAMAAVLENLGKDVAIRYIDFSVSPEKMASLEDEMTLE
                     IISKFQHKADVIQKALGAKTYKLVNINIQTPNDGGRPYYEHRAMYAVSSMAQSKSMDE
                     IPLEAGKTTISATASGSVEFE"
     gene            complement(11197..11934)
                     /gene="tsaA"
                     /locus_tag="PXB09_000749"
     CDS             complement(11197..11934)
                     /gene="tsaA"
                     /locus_tag="PXB09_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDL5232890.1"
                     /translation="MNSTSNQLTPIQLNPIGFVESPYDEKFSVPRQPNLVAEGKGILR
                     LIPPYNTPDAVRGLEKFSHIWLIFQFHHIPEREWHATVRPPRLGGNERVGVFASRATH
                     RPNPLGLSKVKLEAVVAGGSEVYLKLGSVDLVNGTPIFDIKPYIAFADSEPQAVSGFA
                     QQKPQARLAVRFSEEAKQAVEFCRNFAKFGIEQPLSFLADVIAQDPRPAYQQGKPSER
                     VYGMNLAGYNIRWQIENDTQAIVLSIE"
     gene            12114..13022
                     /locus_tag="PXB09_000750"
     CDS             12114..13022
                     /locus_tag="PXB09_000750"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDL5232891.1"
                     /translation="MNKNSLFSIWFTTARPKTLPLALASIIVGSALAHWAGKFDVVTT
                     LLAFITTILLQILSNFANDYGDHVKGSDTKERIGPLRAIQHGVIGGEQLKKAVIILSL
                     LSFVSGVALSAYAFETVQDLFFFIGLGIVSIIAAITYTVGKKAYGYLGLGDLFVLIFF
                     GFVAVIGVFYLQAHSLPIMILLPAFGCGLLSVAVLNINNLRDINQDRQAGKNTLIVRI
                     GSQNGRKYHVALLVLAVISYLIFAISEFEHWYSFIFLLSVPLLAKHARFVYQHKDPKE
                     LYPILGQMAGLALLTNLLFSLGIVLG"
     gene            complement(13098..14084)
                     /locus_tag="PXB09_000751"
     CDS             complement(13098..14084)
                     /locus_tag="PXB09_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDL5232892.1"
                     /translation="MKKSLLALLIGSVFLISACEDGKMTQTVLEAEKQIVQLGTELKN
                     AQADLAKKEAEVAELSGVKAENEKLKSELENAQQNTALNVEIVKIFDKKEVIKHQVDP
                     KQEFAIEESTVSAFVSLPKTNFDWLNQLLINQAYDYNEEQGRKLKNPTEEEFKKHREA
                     VYQGLVESVKTEPAIGYDDHISSAFIGQRNNIATFTMMHYTYMGGAHGMHYTQYINVD
                     LAKKAIIGLNDLISPKNQVQLKDILWENYSSVRVDENGNYNGFADKKEFRISDQFYFT
                     PHGIAFVYPPYELGAYAEGDIEVEADWYIINKLLNSEYQRGEKDGFFEELDN"
     gene            complement(14178..16049)
                     /gene="rpoD"
                     /locus_tag="PXB09_000752"
     CDS             complement(14178..16049)
                     /gene="rpoD"
                     /locus_tag="PXB09_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDL5232893.1"
                     /translation="MENQADQQLEQQSQLELLISQGREQGYLTLSEVHDHLPEELVDA
                     EQIEDIIQMINDMGIQVLEAAPDADDLLLAENIADEDVVEEATKVLSTVESELGRTTD
                     PVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAIAEYPEALSGLLACYAQVETG
                     EMRLSDLVTAFVDPNILEEAPLEDIEAALGEDEESSDVPDVDDENEDENGDSSSDSSD
                     DSSIDPELAREKFEALRSQHEKVLLVIQKHGRTSKKSKEQIEILSHIFREFRLVPKQF
                     DLLVASMQKLMKQVRTEERQIQRYAVEYAGMKKADFLKAFQGHELSEAWIEKAINAKK
                     NAAPKLANYVDNIRVNIANLQNLEQTSGLTIAQIREIGGRISNGELKARRAKKEMVEA
                     NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
                     RSIADQARTIRIPVHMIETINKLNRISRQCLQEMGREATPEELAERMGMPEDKIRKVL
                     KIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRMATNEVLEGLTPREA
                     KVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD"
     gene            complement(16308..18056)
                     /gene="dnaG"
                     /locus_tag="PXB09_000753"
     CDS             complement(16308..18056)
                     /gene="dnaG"
                     /locus_tag="PXB09_000753"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5232894.1"
                     /translation="MKGTIPRSFIDDLIARTDIVEVINSRVKLKKAGRDYQACCPFHH
                     EKTPSFSVSQSKQFYHCFGCGVHGNVITFLMDYDKLEFPEAIEELAAMHGLEVPRENV
                     IQRDGKPQANFKTKRNLYELMEAVAKFYQQNLSHQIEPQSYLQQRGLSEEIIERFEIG
                     FAPNAFDAALRTFGQSQEDIQKLLDTGVLTKNDSGRIYDKFRNRVMLPIRDKRGRVIA
                     FGGRVLPNDEQGAKYMNSPETVIYHKGSELYGLYQALKVNETPDYLFVVEGYMDVVAL
                     AQFGVDNAVASLGTATTGEQIQQMFRCTEQIVCCYDGDRAGRDAAWRALENALPYLQD
                     GRQLKFIFLPDGEDPDTFVRSQGKEGFEQYVAQNAKPLSDFLFDSLLADVDLSSKEGK
                     SKLAALAVPLINRIPGEMLRVYLRNILGQKLGILDPTQIEALLPTKKAAEKPLHQAVK
                     MKRTPMRLLIALLIQNPYFVKFVPDVSALASLKDPGFTLLTDIVATCQQNAGISMGGL
                     LEHYREDPQYKIVEALANWDHLELPENIERTFIDTLDFLYAKLVELRKEELIAKDRTV
                     GLTDDEKKEYALLMFQ"
     gene            complement(18210..18425)
                     /gene="rpsU"
                     /locus_tag="PXB09_000754"
     CDS             complement(18210..18425)
                     /gene="rpsU"
                     /locus_tag="PXB09_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDL5232895.1"
                     /translation="MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTI
                     RKREKASLAKRHAKRNFRENARNTRLY"
     gene            complement(18573..19169)
                     /locus_tag="PXB09_000755"
     CDS             complement(18573..19169)
                     /locus_tag="PXB09_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HDL5232896.1"
                     /translation="MSLLPMNEITSLNQLDLQKSYSYADYLLWKFKERVEIIKGKIVA
                     MSPAPTRFHQRISMKMTAKFLEVFDNHQCQIYSAPFDVRFPDENGKVKTVVQPDLCVI
                     CDVSKLDERGCVGAPDLVVEILSPGNTKREMKDKYELYQEQGVKEYWIVSPETRTIQI
                     FVLENGKYIGIQPVAEDEPATSVVFPALSFSTEKLFEL"
     gene            19311..20567
                     /locus_tag="PXB09_000756"
     CDS             19311..20567
                     /locus_tag="PXB09_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDL5232897.1"
                     /translation="MHLNFKKIDNSHIALFYNVLVATFFVTVLTFKKGYSYVPMALGI
                     IATLSFLFYRFKLKQKWLLDKEDKFFIFSLIGYFLTFAMSAIFNGDGIREIDNPIQIL
                     LLIPLIILFRLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNI
                     AILLSLFSIAIAFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAFIPICFFIL
                     FLNLRQLNKKAIFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSL
                     GARFDMWENALIGIREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNSLHNQYLEAF
                     VKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLA
                     HNSGSLFYFFVLILLYHLVKQNEEII"
     gene            complement(20669..21676)
                     /gene="rfbB"
                     /locus_tag="PXB09_000757"
     CDS             complement(20669..21676)
                     /gene="rfbB"
                     /locus_tag="PXB09_000757"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDL5232898.1"
                     /translation="MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLE
                     SVAHHERYHFEKADICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIV
                     GTYTLLEAARAYWDTLPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYS
                     ASKAASDHLARAWHRTYGLPTVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGN
                     GLQVRDWLFVEDHIRALYLVLQKGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNN
                     PLVVGQYADLITYVQDRPGHDFRYAIDTSKIEKELDWKPKETFESGLRKTVEWYLANR
                     N"
     gene            complement(21673..22254)
                     /locus_tag="PXB09_000758"
     CDS             complement(21673..22254)
                     /locus_tag="PXB09_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HDL5232899.1"
                     /translation="MLEKIEKLIDEINKLHLAFSKDYFETGKIEKVNLKHTFAKVPTP
                     HILAYRLNLHESINDYLYRADLEGISYFYRVKTSESILDKIERFKQRSEGYPVNSILN
                     DIFGARIIVSSEVIQQVMESLDYWQEKYGLKNWYLRDKDEYVGIHIYFKNSSNFYYPW
                     ELQIWDKKDAEKNIQSHIKYKRNFVNQISYSPL"
     gene            complement(22275..23546)
                     /locus_tag="PXB09_000759"
     CDS             complement(22275..23546)
                     /locus_tag="PXB09_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDL5232900.1"
                     /translation="MSIQQKKRHSRWYERIFFSTAVQSILGVMFSSVLPAIYFWGEKF
                     NSIETRSNTIIATSLAFVMIAISLRVLMKYPGNKSASFVFSTVISWYAVLLIVLTIFR
                     FDYSNTLLGTSFILTILFCFIGYFLSRSWIIPKIALVPFGRAINLNRIQNVEWIQLSE
                     PILGEKRINSIAVDLHYPDLSAEWHKFLAKCTLNGIPVYNVRQLEESLTGRVKIRHMY
                     ENDLGSLLPSPIYSLVKRIIDIALIVATFPITLPIMTITAIAIRLESEGGAMFIQKRV
                     GQGGKEFNIYKFRSMCKDSEKDDAQFASSADMRVTRIGKFIRKTRIDELPQFFNVLKG
                     DMSLIGPRPEQTAFVDKFEEEIPFYNYRHIVKPGISGWAQVVQGYAADVDDTKVKVEH
                     DFYYIKHFSLWLDILIIFKTLKTMLTGFGAR"
     gene            complement(23550..24358)
                     /locus_tag="PXB09_000760"
                     /pseudo
     CDS             complement(23550..24358)
                     /locus_tag="PXB09_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         7191 a         5294 c         4446 g         7451 t
ORIGIN      
        1 taaactcaaa gtgaatgata tttgtgaaca agctggggta acccgagctt attttaatca
       61 gttagtaagc ggaaaaatca aaaatccaag cgccaataag cttaaagcct tgcattccgt
      121 tttagatatc gtagaagata gcaaccagcg ttccggggtt atttttggca aattctatcc
      181 tattcacaca ggtcatatta atatgatcta tgaagcattt agtaaagtag atgttttaca
      241 tgttattgtt tgtaccgatt ctgaacggga tttacgtctt ttccaggaaa gtaaaatgaa
      301 acgaatgccg acaaatgaag atcggctacg ctgggtacag caaattttta aataccaaca
      361 aaaacagatc tttattcacc atttagttga agacggtatt ccgagctatc caaatggctg
      421 ggaagattgg tctggtcgtg ttaaagcgct atttgaagaa aaaagcatta atcctactat
      481 tgtttttagt agtgaaattc aagataaaga atcttatgaa aaatatttga atctagaagt
      541 tcaacttgtc gatcctactc gtgaatcctt taatatttca gcaacacaaa ttcgtaataa
      601 tccttttcaa tactggcgct ttattccgaa agaagttcgt cctttctttg ttaaaactat
      661 tgcgatttta ggtggtgaaa gcagtggtaa atcagtgttg gtgagcaaat tagcgaatgt
      721 atttaacact acctctgctt gggaatatgg gcgtgagttt gtgtttgagc aacttggtgg
      781 caatgaacaa gcaatgcaat attccgacta tccgcaaatg gtgcttggac atcaacgcta
      841 cgttgattat gccatgaaac atgctcataa agtggctatt attgataccg attacatcac
      901 aactcaagcg ttctgtattc agtatgaagg gaaggctcac ccgtttctgg attcaatgat
      961 ccgcgaatat ccttttgatg tgacgatttt actttctaac aatacaaaat gggtagccga
     1021 tggtttacgc agtttaggat cgaaaaaaca gcgtcaacag tttcaacacc tactgaaaaa
     1081 actactagaa aaacaccata ttccttatat taaaattgaa tctccaagtt atttggatcg
     1141 ctacaatcaa gccaaagagg tggtagaagc tattttaaat gaagaaccaa tcccattaca
     1201 gtttaagcaa tataatattc acgaatttga ataactgcca caggaaataa catgatactt
     1261 tttgcaggcg atccacacgg tagctacgag catctttatc cgattctaca acagcagacg
     1321 gaggaggtag ctttagttat tctaggcgat cttcaattga ctactcctga tgaattagat
     1381 cggctttcgc agtattgtga tatttggttt attcatggta accatgacag taaaaccgtt
     1441 gctgcctttg atgctatttg gaatagtagc tggaaagaac gcaatattca cggtaaagta
     1501 gttgacattc aaggaataaa aattgcaggt attggagggg tcttccgagg tcatatttgg
     1561 atgccgccca atcgtccaat gttttttgat cccatccatt tttgccaata ctctgctccg
     1621 gaaaaaattt ggcgtggtgg tattccatta aggcaccgct cttcgatctt cccttctgat
     1681 tttgaagcat tggaaaatga aaaagccgat attttaatta cacacgaagc accaaagcca
     1741 caccctcaag gcttctctgt aatcaaccag ctagcaagaa aattaggggc gagcaaaatt
     1801 ttccatggcc actaccatga taattttaat tatggcaatc taaatgtcag cagagaatgt
     1861 gctatttata atatcggctt tcgtagccta gcggatatta atggaaatta tctaatttta
     1921 ggtgttgatg atcgagagaa atagccaaaa atttgactga attaaacaaa ttgtcatttt
     1981 acccttccca ttcataaatt tataagtaaa atgcgagaaa tttgtaacat aaacgttatt
     2041 aaacagaatt tataaattaa atcagaggtt taaaagatga agatcccaca aatcttaatt
     2101 gttgaggatg agttagtaac aaggaatatg ctgaaaagca tttttgaagg agaaggatat
     2161 caggtatttc aagcatctaa cggcgaggaa atgcactctg ttctgagtac aaatgaaatc
     2221 aatcttgtgc taatggacat taacttaccg ggaaaaaatg gattaattct cgcccgagaa
     2281 attcgagaga atatgaagct accattaatg tttttaaccg gtcgcgacaa tgaaattgat
     2341 aagatcctcg gtttagaaat aggtgccgat gactatatca ctaaaccgtt taatcctcga
     2401 gaattgacta tccgagcgag aaatttattg caacgaacga tgatagataa agaaaacgac
     2461 gttgtaaaag agcaatctga aattgaaagc tatcgcttta acggttggat cttagacatt
     2521 aacagtcata gtttaatctc accagaaggt gaggtaaata aattaccacg tagtgaattt
     2581 agggctttat tacatttttg ccaacatcct ggaaaaattc aaacacgtga agatttattg
     2641 aaaaaaatga ccgggcggga actaaaacct catgatagaa ccgttgatgt tactattcgc
     2701 cgtattcgta aacattttga agaccacccc aataccccag aaattattgt caccattcac
     2761 ggtgaaggct accgtttctg tggtaacatc gaaccttaat caagatagga gtaattttat
     2821 gaaaaaatta actattgtcg cattaacttg cttattttct acccatctat tagccgctcc
     2881 tgtcggaaat acatttactg gcatcggtgt cggtgtagat gtaactacaa caaaatacaa
     2941 agttgaagga gtaaaaggca aggattccac aggtccggca ttagttgtcg attatggtat
     3001 tgagcaaggc aataactttg taggcgttgt acaaggaaaa gcaaaagtag gtagtacaaa
     3061 agtatttagc gatgtaaaac aaaaaaataa atatactata gcttatcaac aaggttatcg
     3121 tgttggatcc gatttattac cttatgtaaa agtagatgcc agctcaagca aaatcggtaa
     3181 tgaaacctat cgtggctttg gtttcggtgc tggtgcaaaa tatgcagttt caagcgatgt
     3241 tgaattaggt gcagaataca ctcgcgataa tttaaaacgt agcggcacaa aattaaaagg
     3301 taacgctttc accgcgaatg caacttatcg tttctaatct tagcggtaaa gttttctgaa
     3361 aaaataaccg cttgtaacac aaaagagcct gaagtgattc aggctctttg ccttttaata
     3421 taatactcgg gctcgaatcg tgccttcgat cgcttttaaa cgttgtaatg cttcatcaac
     3481 attgtcgctc tctacatcaa ttacaacata accgatagct gcatcggttt gtaaatattg
     3541 agcggcaata ttcacatttg attccacaaa aatctggtta atttgattta acatacctgg
     3601 gcgattctcg tgaatatgta ataaacgttt ggtattagta tgaagcggta aggatacttc
     3661 agggaaattc actgccgtca cggttgaacc gttatctgaa tatttcacaa atttattggc
     3721 aacttcggtg ccgatatttg cctgagcttc agaggttgaa ccaccaatat gtggcgttaa
     3781 aatcacgtta tcaaacttgc acaatggtga cacgaacggg tcattaattg atgccggttc
     3841 ttccggaaat acgtcaatcg ccgcaccacg caatgagccg tcttcaatcc gagcggctaa
     3901 tgcgtctaaa tcgaccactg taccacgagc ggcattaatt aacaccgagc cttcttttaa
     3961 ttgagcaatg cgttctgcac tcattaggtt tttagtcgag tcgatttccg gaacgtgtag
     4021 tgaaatcata tcgcaggttg aaagcaaatg ctctaatgtc ggcacttgct gtgcattacc
     4081 gagtggtagt ttgttttcaa catcatagaa ataaacctgc ataccaatgg cttcggcaag
     4141 aatactaagc tgtgaaccga tatgaccata tcccacaata cctaatttct tgccacgtac
     4201 ttcgtttgca cctgctgccg atttattcca caccccacga tgcacttccg catttgcagt
     4261 cgggacttta cgcattaata aaatcatctc tgccagcact aattctgcca ccgagcgggt
     4321 atttgagaac ggtgcattga ataccggaat acctcgtctt ttcgccgcat tcaaatcaac
     4381 ttggtttgta ccgatacaga aacaaccaat cgcaattaat ttcggagctt gagccagtac
     4441 ttcttcggtt aaaaaagtac gcgagcgaat accaacaaag tgtgcatctt taattgcatc
     4501 aattaattct tgaccgtcta atgctttttt atgcacttca atattggtat aaccagccgc
     4561 taagagtaca tcaattgcgt tttgatgtac gccctcaagc agaaggaatt tgatcttgga
     4621 tttatccaaa gaaattttag ccattttttg ctcctaagta tttgtatttg caataataaa
     4681 ttattctaaa ataactgcac cttcaggtgt gccgacaatg gttacattgg caaaacgttg
     4741 tgcaaaaata ccgttagtca ccacgcctgc aatattatta atggtatgtt ccattttcaa
     4801 cggctccata attttaaagt tatgtacatc taaaatcaca ttgccgttat cagtgaccac
     4861 gccctcacgg tattccggcg aaccacctaa ggctacgagc tgacgagcca cataagaacg
     4921 agccattggg atcacctcca ccggcagagg gaaagttgaa cccagcacat caacttgttt
     4981 ggatttatcc acaatgcaga taaatttttt cgctaatgaa ctcacgattt tctcacgggt
     5041 aagtgctgcc ccgccacctt taatcatcgc cccttgtggc gtgatttcat cagctccgtc
     5101 aatatacaca tctaattccg tcacttcatt ggcactgaat acttcaatgc cgatatcacg
     5161 caaacgctgt tccgaggctt tagaggcagc aaccgctcct ttaatctcat ctttcattga
     5221 agcaagggca tcaataaaac agtttacggt tgaaccactt cccaccccaa caatagtgtc
     5281 cggttttaca aattttaatg cagcttgtgc cgcaattttt ttcatttctt gttgatccat
     5341 ttttacctcc acttgtaggg caaatcatca tttgcccact tcggcaaggc gaaaaaaatt
     5401 ttcgccctac tacatctatt ctacacatat atgtaacaag cggtcatatt tggcaaattt
     5461 tttaccaaaa acgaccgctt gtcattagtt acgttttact gcttcaacaa tctcttccgc
     5521 acagctttga gcaagtacag catcttcgca ctccaccatc actcgaatta atggctcagt
     5581 gcctgattta cgcaataaaa tacgcccttt gcctgccaag cgtttttcca catctgccgc
     5641 taccgctttc acttcgttac tttcaagcgg atttgccgcc cctttctcaa agcgaacatt
     5701 tagcagaact tgcgggaaca gaggcactgc ttttgccaaa tcattcaggc ttaatttgtg
     5761 gcttgccatt gctgctaata cttgcagtga ggcaataata ccatcaccgg tggtgttttt
     5821 atctaacacg ataatatgcc cggagttttc gccacccagt ttccagcctt tttctttaag
     5881 ctgctctagt acatagcggt cacccacgtt agcacgagag aatggaatgg ctagctcttt
     5941 taaagctaat tccaagctca tattactcat taatgtaccg actacaccgc cttgtaattt
     6001 gcctgaacgt agagcttctc gggctaaaat aaatagaatt tggtcgccat caactttatt
     6061 gcctaagtga tcgaccataa tcaaacggtc gccatcacca tcgtaagcta gaccaacatc
     6121 cgcacctgct tctaccacca ctttttgaag tgctttaata tccgttgcac cacatttttc
     6181 gttgatgttt aaaccgtccg gcttagtacc gatttcaagc acttctgccc ctagctcacg
     6241 cattacattc ggcgcgatat ggtaggttgc accgttggca caatccacca caattttata
     6301 gccttcaagg cttagttcag acgggaaagt gcctttacaa aactcgatat aacgtcctgc
     6361 ggcatcatta atacgactgg cacgacctaa atttgctgaa tctacgcaat ccataggctt
     6421 atcaagcatt gcttcaatcg cttcttcaat ttcatcaggt agtttttcac caaccgacga
     6481 gaagaattta atgccgttat cgtaataagg attgtgagag gcagaaatca caatgccggc
     6541 ttccgcacgg aaagtacggg ttaaataagc aattgccgga gtcggcatcg gaccaacgaa
     6601 tactgctgat aaaccggctg cggttaaacc ggcttccaga gccgattcca acatataacc
     6661 ggaaatacgg gtatctttac cgattaatac ttttttcgtg ccttgggttg ccaacacttt
     6721 acctgctgcc caaccgagtt ttaatgcaaa ttcaggtgta attggaaatt tacctacttc
     6781 accacgcaca ccgtctgtgc cgaaatattt acgagccatt ctaattccta agattgataa
     6841 aaatttactt taaaaaatat tgatatgccg gactttcgct cacattttgg aagcggtaac
     6901 ctagctgttc taaatgtcgg tttaattcta cttcatcgcc tctgtttaat gcaaatgcgg
     6961 caagaatatc gccataatcg gctccgtgag ctcggtaatg gaataacgag atatcccagt
     7021 tagtcagcat ttgtaagaat tttagcaatg cccctttctg ctctggaaat tcaaagctat
     7081 agagttgctc atattgaatg gagcttgctc taccgcctac catataacga atatgggttt
     7141 tggcaatatc atcgtccgat aaatctgcca catcatagcc gttttgttgc agatctttaa
     7201 taatctctac tttttctgcc gagcctgaaa ttcgcacccc cacaaaaata caggcttgtt
     7261 tatcatcgga atggcgatag ttaaattccg ttaccgcacg gttgcctaaa atctcgcaga
     7321 attttaagaa actacctttc tgttcagcaa tggtgactgc caataaagct tcacgtttct
     7381 ccccgatttc acaacgctct gacacaaaac gtaaggtgtg gaaattcaca ttcgccccgg
     7441 aaagaatgca agctaagttt ttatcttgta attgatgctc tttcacatat tttttcaaac
     7501 cggcaaggga agttgccccg gacggctcgg aaatcgcacg cacattttca aaaatcaact
     7561 tcattgaggc acagatttca tcattatcca ccaacaccac atcatcaaca tattgctgac
     7621 acaggcggaa agtttcatcg ccaatgcgtt ttaccgcaat accgtcagca aaaagcccaa
     7681 cccgttctaa atcggtcggt tgcccttgct ttaaggcgtg atataagcaa gcagaatctt
     7741 tagattcgac cccaatcact ttaatattcg gcatcacctg cttaattaaa accgcaatgc
     7801 cggcaattaa gccgccaccg cccactggaa taaatacata atctaaatcc ggcttttgtt
     7861 gcaccagttc taagccgatt gtgccttgcc ctgcaatcac tgccgggctg tcaaacgggt
     7921 gaatgaaggt catacccaat tcggtggaaa gctcaatcgc tttcgcctta gcttcatcaa
     7981 aattcgcccc ataaagcaac acttcaccac catagccacg taccgcatca accttaattg
     8041 ccggtgtgtt ttgcggcatt acaatcaagg ctcttaaacc taaatgtttg gcagaaagtg
     8101 ccaccccttg tgcgtggttg cctgctgaag ccgcaatgac tccagcctct ttttgtgctt
     8161 tggataaatt tgagatcatc gcaaaagcac ctcgcaattt aaagctgtga accggctgtc
     8221 ggtcttcacg tttgataaaa atagagttgc ctaaccgctc agacagtttt tccattttct
     8281 gtaaaggggt cacttgcgct aagtcataaa tatttgagct taaaatcgag cgtaaatagt
     8341 cgatagcgga ttgggaatgt tgtgtttcgt tcatcatttt gaaaggttat ttattgttag
     8401 attgagataa agacattggt aaatttccaa ggaaaattga ccgcttgttt ggttatttag
     8461 caatggcttt aacagggaat atttcctctc gcccgtttgc gggagagaga cagcttaaaa
     8521 tttcgttcag aaattttaag cagagagagg ggaaaccttg gatatccccc tctccctccg
     8581 caaatcttcg atttgctcca ccctctcccg caagcgggga gaggggaaat cacaaagtta
     8641 gtgatgacca ccgcaaccac agccaccgtg tccgtgatga tggtgatgat cgtggtcgtg
     8701 accgccgcag caaccatcgt gatcgtgatg atgatcgtgc ccaccacaac cgcaaccgtg
     8761 ttcgtgtccg ccgtgaacgt gtccgtgtgc gatttcttcc gctgtcgctt cacgaatgcc
     8821 aaccacttcc acagagaaaa gtaattcctg accggctaac atatggttac cgtccaccac
     8881 aacttcatcg ccatctactt cggtaattac caccggtagc ggacctaaat ccgtgtccgc
     8941 aataaaacgc atacccactt ctaattcatc gacgcccata aatacatctt tcggtacacg
     9001 ttgaaccata ttatcgttgt actcgccgta accttcttcc ggtttcacac gcacttcaaa
     9061 cacatcgcct acagctttgc cttcaagggc tttttctaag ccttctacca agttgttgtg
     9121 accgtgtaaa tattctaacg gttggtttac cggtgcttca tctactaata cgccttcttg
     9181 agtacgcact tgatatgcaa tgcttggcac taaatctttt gtaatgttca tattgaatcc
     9241 tttaattcat cggttttata aaatagcaag ccattgtaac gctttatttt atatttgcaa
     9301 tctatctgga aattttaacc gcttgtcagt aaattagtcg ataatatcag gggttacggt
     9361 gtctaccaca tcaactgcgg ttcccaccac tccaccaacc accgaagtta ccaaacaacc
     9421 acttaggaaa atagttgctg aaatcagccc acatactttg attaattttt tcattttaaa
     9481 atcctttcaa aaacaaaaaa cagccctaat caagactaga gctgcatcat atttattcgc
     9541 ttaaattatt tttcttcagc gataaagcga taaactaccg caccgataat tgcaccgaca
     9601 atcggagcaa cccagaacaa ccataattgc tcaatcgccc agctgccttg gaataacgct
     9661 acaccggttg aacgtgccgg gtttactgag gtattggtta ccggaatgct gattaagtgg
     9721 attaaggtta aagccaaacc aatagcaatc ggagcgaaac ctgctggagc acgtttatcg
     9781 gttgcaccca taatgatgat taagaagaat gccgttaata ccacttcaat taataatgct
     9841 gctgttaagc tatagccgtg tggcgaatgc tcaccataac cgttgccggc aaagcctgct
     9901 gtagcatcaa aagtcggaac acctgaagca atggtgtata acactgcacc ggcagcaatc
     9961 gcaccgatta cttgggcaat gatataaggc actaaatctt tagcgttaaa acgaccgccg
    10021 actaataaac cgattgaaac cgccgggttg aagtgaccac ctgaaatatg accgactgca
    10081 tacgccattg ttaatacggt taaaccgaag gctaacgaaa cgcctgcata accgattcct
    10141 aattcaggaa tgcctgctgc taaaactgca ctgccgcaac caccaaacac taaccaaaat
    10201 gtcccgaaaa actcagcaaa atattttttc attttttatc cttaccctaa agggtgaatc
    10261 acacataagt gtattaactt tccgaatgct ataaaacata gccaataaaa tatgagtata
    10321 ctaaaaaaag taaagacgca tatttcttaa ttgatagtat agaccgattt tttcctccaa
    10381 ttaaagtaaa aatacaactc tatacaaatc tatacatttc tattcaaatt ccacacttcc
    10441 tgaagcggta gctgaaattg tggttttacc tgcttctaac gggatttcat ccatagattt
    10501 gctttgtgcc attgatgaaa ctgcatacat tgctctgtgt tcataatatg gtctaccacc
    10561 atcatttgga gtttgaatat tgatattaac tagcttatat gttttcgccc ctaaggcttt
    10621 ttgaatcaca tcggctttat gctgaaattt gctgataatt tccagcgtca tttcatcttc
    10681 aagggacgcc attttctctg gcgatacact aaaatcaatg taacgaatcg ccacatcttt
    10741 acctaaattt tccaacaccg ctgccattgc atcaaaatct ttgcttttca actgaatgct
    10801 accagaggta tcccaaccat caatattccc tttgttgtta taattaacgt gattagtcac
    10861 accttcagct tgtacttcaa tcgatggatg tttttttgcc tcagccaata cacgattcag
    10921 gttttcagat acaaattttt tcagctccgg caaggagtta cctgattttt ggctatacac
    10981 acttgcctgc atcacgtcct tttccaccgt gcgagagact tcggttgaga aattaaaaga
    11041 agccggttta tctttatgtt ccacggtatg agtttccgct gaagttaccg ctgttgcgac
    11101 tgcaagcggt agaatggtaa gaaaattttt caatttcata atcagtcctt aaaagggtta
    11161 aaaatcattt cttagatctc acttgcgtag gaaagttcat tcaatcgaaa gcacaatcgc
    11221 ctgtgtatca ttttcaattt gccagcgaat attgtagccg gcaaggttca taccataaac
    11281 tcgctcacta ggtttccctt gttgatacgc cgggcgaggg tcttgggcga tgacatcggc
    11341 aagaaaacta agcggctgtt cgatgccaaa ttttgcaaaa tttcggcaaa attcgacagc
    11401 ttgttttgcc tcctcgctaa aacgcaccgc taatcttgct tgtggttttt gctgagcaaa
    11461 accggaaacc gcttgcggct cgctatctgc aaatgcaatg taaggcttga tgtcaaaaat
    11521 tggtgtgccg ttaactaaat ccacgctgcc taatttcaaa taaacttcac tcccccccgc
    11581 cactaccgct tctaacttca ctttcgataa gccaagcgga ttcggacgat gggtggcacg
    11641 gctggcaaag accccgaccc gttcgttccc gcccaagcga ggcggtctga cggtggcgtg
    11701 ccactctctt tcgggaatgt gatggaattg gaaaatcaac caaatatgac taaatttctc
    11761 caagcctctg actgcatcgg gggtattgta aggcggaatt aaacgtagaa tgcctttccc
    11821 ctccgctacc aaattcggct ggcgaggcac ggaaaatttt tcatcatagg ggctttccac
    11881 aaaaccgata gggtttaatt gaatcggggt tagttgattt gaggtagagt tcattacgct
    11941 tttttctgtt aaaataatat aaaatattgg acataatgat atgaaattga ggatggtgca
    12001 agcgtccacg cttgtaccaa ttcgttttac catttaacac aagagtggac gcttgcacta
    12061 tcgcttaaat ccttaacatc attgtaaatg aaattacgct aagattattc tctatgaaca
    12121 aaaattctct cttttcgatt tggtttacca ccgctcgccc gaaaacttta ccgctggcgt
    12181 tagcttcaat tattgtgggt tcagcacttg ctcattgggc agggaaattt gatgttgtta
    12241 ccaccttact cgcatttatc accaccattt tgttgcagat cctgtctaac ttcgccaatg
    12301 attacggcga ccacgtcaaa ggctctgaca ccaaagaacg aatcggaccg ctacgggcga
    12361 ttcaacacgg tgttattggc ggtgaacaac ttaagaaagc cgtgattatc ttaagcctac
    12421 tctcgtttgt ttccggtgtt gccttaagtg cctatgcttt tgaaacagtg caggatctgt
    12481 ttttctttat cgggcttggc atcgtctcaa ttattgccgc cattacttac accgtcggca
    12541 aaaaagccta cggctatttg gggctgggcg atctatttgt gctgattttc tttggctttg
    12601 tagcggtaat cggcgtgttc tacttgcagg ctcatagcct acctataatg attctgctcc
    12661 ctgctttcgg ttgcggattg ctgtctgtag cagtgttaaa tatcaataac ttgcgtgata
    12721 ttaaccaaga ccgacaagct gggaaaaaca ctctcattgt acgaatcggt agccaaaacg
    12781 ggcgaaaata ccacgttgca ttgttagtgc tagcggtcat ttcttatctg atttttgcaa
    12841 tttctgaatt tgaacattgg tatagcttca tttttttgct gtctgtaccg ttactggcaa
    12901 aacacgctcg ttttgtctat cagcataaag acccaaaaga actctaccca attctagggc
    12961 aaatggcagg gctggcgttg ctcactaatc tattatttag tttgggcatt gtgttagggt
    13021 aagttgcaaa attttaacaa aactaaaccg cttgtaataa aggattacaa gcggttgttt
    13081 tttatctaaa tttacaatta gttatctagt tcttcaaaga atccatcttt ttcgccacgt
    13141 tgatactccg aattgagcaa cttattaata atgtaccaat ccgcttcaac ctctatatcg
    13201 ccttctgcat aagcacctaa ttcgtatggc ggataaacaa aagcaatgcc gtgaggggta
    13261 aagtagaatt ggtcagaaat acggaactct tttttatcag caaatccatt atagttgcca
    13321 ttttcatcca cacgcacgct actgtaattt tcccaaagaa tgtctttcag ttgaacttga
    13381 ttttttgggc tgattaaatc atttaagcca atgattgctt ttttagctaa atctacattg
    13441 atatattgcg tatagtgcat accgtgagcc ccacccatat aggtgtaatg catcatagtg
    13501 aatgtagcaa tattattgcg ttgcccgata aaagcactgg aaatatgatc atcatagcca
    13561 atagctggct cggttttcac actttctacc aacccttgat aaaccgcttc acgatgcttt
    13621 ttaaactctt cttcggttgg atttttcagc tttctgcctt gttcttcatt gtaatcatag
    13681 gcctgattaa tcaaaagctg gttaagccaa tcaaaattgg tttttggtag agacacaaac
    13741 gcacttactg tactttcttc tattgcaaat tcttgtttcg gatcaacttg gtgcttaatc
    13801 acctctttct tatcaaagat tttcacaatt tcaacattta acgctgtgtt ttgctgagcg
    13861 ttctctaact ctgattttaa tttttcattt tctgctttca cccctgaaag ttctgcaact
    13921 tcagcctctt tttttgctaa atcagcctga gcatttttta attctgtgcc taactgaaca
    13981 atttgttttt cggcttctaa taccgtttgg gtcattttgc cgtcttcaca agctgaaatc
    14041 agaaatactg agccaattaa aagtgctaat agtgattttt tcatctctcc ctcttttgta
    14101 aaaaatacgg taaatatcac cgcttgttat acagattaaa acaaaatccc ctataccatc
    14161 aggcataggg gaaatgatta gtcgtctaag aaactgcgta aggtttccga acggctcggg
    14221 tggcgaagtt tgcgcagtgc tttcgcctca atttggcgga tacgttcacg agttacgtca
    14281 aattgtttac caacttcttc gagtgtgtgg tctgtgttca tatcaatacc aaaacgcata
    14341 cgcaacactt tcgcttcacg cggggttaag ccctctaaca cttcgttcgt tgccatacgc
    14401 aggctctccg cagtggcgga atccaatggt aattcaaggc tttcgtcttg aatgaaatca
    14461 cctaaatgtg aatcgtcatc gtcaccgatt ggtgtttcca ttgaaatcgg ctctttggca
    14521 attttcaata ctttgcggat tttatcttcc ggcattccca tacgttctgc cagttcttcc
    14581 ggcgttgcct cacgccccat ttcttgtaaa cattggcgtg aaatacggtt gagtttgttg
    14641 atagtttcaa tcatatgcac cggaatacga attgtacggg cttggtcagc aatcgaacgg
    14701 gtaatcgctt gacgaatcca ccaagttgca taagtcgaga atttataacc acggcggtat
    14761 tcaaatttat ccaccgcttt cattaaaccg atgtttcctt cttggattaa atctaagaac
    14821 tgcaagccac ggttagtgta ttttttcgca atcgaaatca ccaaacgtaa gttagcttcc
    14881 accatctctt ttttcgcacg gcgggctttt aactcaccat tggaaatacg cccgccaatt
    14941 tcacgaattt gagcaatggt taagcctgat gtttgctcta aattctgtaa gttagcaata
    15001 ttgacacgga tattatccac ataattagct aatttcggtg ctgcattttt cttggcatta
    15061 atcgcttttt caatccacgc ttcgcttaat tcgtgccctt ggaatgcttt caagaaatcc
    15121 gcttttttca tgccggcata ttccactgca tagcgttgaa tttgacgttc ttcagtgcga
    15181 acctgcttca tcagtttttg catagaagca accaataagt caaattgctt cggcaccaaa
    15241 cggaattcac ggaaaatatg agataaaatt tcaatttgct ctttcgattt tttactggtt
    15301 cgcccgtgtt tttgaatgac caataacact ttttcatgtt ggctgcgtag ggcttcaaat
    15361 ttttcacggg caagttccgg gtcaattgag ctgtcatcac tgctgtctga actgctatca
    15421 ccgttttcat cttcgttttc gtcatctaca tcaggcacat cagaagattc ttcatcttca
    15481 cctaaagcag cctcaatatc ctctaacggt gcttcttcta aaatattagg atcgacaaat
    15541 gctgtcacta aatcagaaag gcgcatttca ccggtttcga cttgagcata gcaggctaac
    15601 aggccactta aggcttccgg atattccgca atcgcacatt gaacttcgtt aatcccttct
    15661 tcaatgcgtt tagcgatatc aatctcacct tcacgggtta aaagctcaac tgtccccatc
    15721 tcacgcatat acatacgcac agggtcagta gttctaccta actctgattc tacggttgaa
    15781 agcactttgg tggcttcttc taccacatct tcatcggcga tattttcagc gagtagtaaa
    15841 tcatccgcat caggggcagc ctctaaaact tggataccca tatcgttgat catctgaata
    15901 atatcttcga tctgctccgc atccaccaac tcttccggta agtggtcgtg cacttcagaa
    15961 agcgttaaat atccctgttc acgcccttga ctgatcagaa gttctaattg agattgctgt
    16021 tctaattgtt gatctgcttg gttttccata gtctatccgt ttattatgcg agcaaaaata
    16081 gtagtggatt ataccactaa atttggttcg acttcataaa ttcacaaaaa aattctattt
    16141 ttctaattta cacattactt tgatgcttat gagaacagag aggtgtagca agagagataa
    16201 ataactttct ttttagatag aattaattat tttcttcgtt catcacttct gccaaatctc
    16261 ccctaacccc tctttgctaa agaggggaat tattcgagct taaaattcta ctgaaacatc
    16321 aaaagagcat actctttttt ctcatcatcg gttaagccca cggttcggtc tttggcaatt
    16381 agctcttctt tgcgtaattc cactaatttg gcgtagagaa aatcgagagt gtcaataaat
    16441 gttcgttcga tattttcggg taactctaaa tgatcccaat ttgcgagggc ttcaacaatc
    16501 ttatattggg gatcttcccg ataatgttca agtagcccgc ccatactgat acctgcattt
    16561 tgctgacaag ttgcgacaat atcggttaat aatgtaaagc caggatcttt caaggaggct
    16621 aaagcactta catcgggtac gaatttcaca aaatacggat tttgaatcaa taacgcaatc
    16681 aacagccgca ttggcgtacg tttcattttg accgcttgat gtaaaggctt ctctgccgct
    16741 tttttcgtcg gtaacagagc ttctatctgc gttgggtcta aaatgcctaa tttctgtcct
    16801 aaaatattgc gtaaatacac tcgcagcatc tcgcccggaa tacgattaat taacggcaca
    16861 gctaaagcag cgagcttgga ttttccctct tttgaagaga gatccacatc cgccagcaaa
    16921 ctgtcaaata agaaatcgct taatggcttg gcattctgtg ccacgtactg ctcaaatcct
    16981 tctttacctt gagaacgaac aaaggtgtcc gggtcttcgc catcgggcaa gaaaataaat
    17041 ttcagttggc gaccgtcttg caaataaggc aacgcatttt ctaacgcccg ccaagctgca
    17101 tctcgaccgg ctctatcgcc atcataacaa cagacaattt gctcggtgca acgaaacatt
    17161 tgctgaattt gttcaccggt agttgccgtg cctaaagagg cgactgcatt gtccacgccg
    17221 aattgggcaa gggcgaccac gtccatatag ccttccacca cgaacagata atccggcgtt
    17281 tcattgactt tcagtgcttg atacaagcca tataactcac tgcctttatg ataaatcacc
    17341 gtttcgggcg agttcatata tttcgcccct tgctcatcat tcggcaacac ccgcccacca
    17401 aaggcaatta cccgtccacg cttatctcga atcggtaaca ttacccgatt gcgaaattta
    17461 tcgtaaattc gaccgctatc atttttggtt aaaacgcccg tatcgagcaa tttctgaata
    17521 tcttcttgtg attgcccaaa agtgcgtagg gctgcatcaa aggcattcgg agcaaaacca
    17581 atttcaaagc gttcgataat ctcttcagac aaacctcgtt gctgtaaata gctttgtggc
    17641 tcaatctggt gcgataaatt ctgctggtag aacttcgcca ccgcttccat caattcataa
    17701 agattacgct tagttttaaa attagcttga ggcttgccgt cacgttgaat cacattctct
    17761 ctcggtactt ccagcccgtg catagctgcc agttcttcaa tcgcttccgg aaattcgagt
    17821 ttgtcataat ccatcaaaaa ggtgatgaca ttgccgtgta cgccacagcc gaaacaatgg
    17881 taaaactgtt ttgattggct taccgaaaag gaaggggttt tctcgtgatg aaaaggacag
    17941 caggcttgat aatctcgccc agcctttttg agtttgaccc gactgttgat gacctcaaca
    18001 atatcggtgc gagcgataag atcatcaata aatgaacgtg gaattgtgcc tttcattgat
    18061 ttcctcctgc tctttgaatg atacaagcgg agcaattttg caaatttttt gcaaaaaaca
    18121 accgcttgaa atagaaacgt taaaaacacc aaaaccgtga gcctaacgga atcacggttt
    18181 cgatatagtt tgctaaccag cctaactaat tagtataaac gtgtgttacg tgcgttctca
    18241 cggaaattac gtttagcgtg acgtttagca agtgatgctt tttcacgttt acgaattgta
    18301 gttggttttt cgtagaattc acgagcacga acttcagcta agatacccgc tttttcgcaa
    18361 gagcgtttga aacgacgtaa tgctacgtca aatgattcat tttcacgaac tttaattact
    18421 ggcatatgcc atcacctcag aaaaatatga ttaaattaaa ccgcacacaa ttttggcggc
    18481 atagaacaaa aaaggtagtg cattctacct taagcactca cataagtaaa gtagtattgt
    18541 ggcataaaac cgccgtatta tgttgcattt ttctacagtt cgaataattt ctcggtcgaa
    18601 aaacttaatg ccggaaagac caccgaagtt gccggttcat cttctgccac cggctgaata
    18661 ccgatatatt taccgttttc caacacaaaa atctgaatag tgcgggtttc gggagaaaca
    18721 atccaatact ctttcacccc ttgttcctgg taaagctcgt atttatcttt catctccctt
    18781 ttggtattac ccggagaaag gatttccacc actaaatccg gtgcccctac acagcctctt
    18841 tcatctaact tactgacatc acaaattaca caaagatcag gctgcactac agttttgact
    18901 tttccgtttt catcgggaaa ccgaacgtca aaaggcgcag aataaatctg gcattggtga
    18961 ttgtcaaaaa cctctaaaaa ttttgctgtc atcttcatag aaattcgctg atgaaaacga
    19021 gtaggagccg gagacatcgc cacaattttc cctttgataa tctcaacccg ctctttaaat
    19081 ttccatagca aataatcagc gtaactgtaa cttttttgta agtccagttg atttaagctg
    19141 gtaatttcgt tcattggtaa taagctcata ccgcctcctt tatcagaaat ataaagatat
    19201 tatgccgaat aatccctcaa attcaacaaa actttcgcta aaaagagata gataaccttt
    19261 atacccttag tataaaatga cagcaatttt cattgtttta ggatatgtcg atgcacctta
    19321 acttcaaaaa aatagacaac tcacatattg ctcttttcta taatgtacta gtcgccacat
    19381 tttttgtcac tgttttaacc tttaagaaag gttatagtta tgtgccaatg gcattaggta
    19441 ttatcgctac acttagtttc ttattttatc gtttcaaatt aaaacaaaag tggttacttg
    19501 ataaagagga taaatttttt attttctcgc ttattggcta ttttctaacg tttgcaatgt
    19561 ctgctatttt taatggcgat ggcattcgtg aaattgataa tcctatccag attttattgc
    19621 ttatcccttt aatcatcctc tttagacttt acccgattaa aaaagaaact gtattgcact
    19681 ttataccgat tggagcgttg gtagctggtt gtatagcaat atatcagagg tttatattaa
    19741 atcttaaatt tcctttccct gaaataatgc gtattcaatc ggggaacata gcaatattat
    19801 tatcactatt tagtatagca attgcctttt attggctttc aaaaaaaaga attaaaactg
    19861 gcattgccta cctggttttt gccatgtttg ggttatttgc cagtattcta acaggagcaa
    19921 gaggcggctg gcttgcattc attcccattt gcttttttat cctattttta aatttaagac
    19981 agctaaataa gaaagctatt ttcctgattc tattagcact tatatcttca ctctcatttt
    20041 ttatctccaa accagaattt ggcatacaaa aacgatataa tgcagctaag aatgatatta
    20101 tcgtattttt agaaaaagga aatagacatt catctctggg agctcgtttt gatatgtggg
    20161 aaaatgcgct tatcggaatc cgtgaaaaac cgctattagg acacggtagc acaggctatg
    20221 aaacattcaa aaagaaacag attgaaacaa aacaaatggc aaaaacaacg cttaggttta
    20281 atagcttaca caaccaatac ctagaagcct ttgtgaaaag aggtgtagtt ggttttatgg
    20341 cgctaatggc tattttaatt attccatttg ttatttttgc caaacgatta aaggcaaaaa
    20401 atagagaggt aaaatgtatg gcgatattag gcattgtaca tattatttcg cattcattct
    20461 ttttcctaag ccaatcattt ttagcccata attcaggctc attattctat ttctttgtgt
    20521 taattttact ctaccattta gtcaaacaga acgaagagat aatatgataa aacaatagaa
    20581 gaaagttggg aatataaccg aggtggtaac ttcatcttct accacaggat aaatgtcggg
    20641 atatttcctc tttttctgct tcttactact aattccgatt agccaaatac cattccactg
    20701 ttttacgcaa gccactttca aaagtttctt tcggtttcca gtcgagttcc ttttcgattt
    20761 ttgaagtatc aattgcatag cggaaatcgt ggccagggcg atcttgcaca taagtaatta
    20821 aatcagcata ttgtcctaca acaagcgggt tatttggcac catttcttgc aaaatagaac
    20881 agatagaacg aaccacttcg atattggttt tttcattatg cccgccaata ttgtaggttt
    20941 ctccgatttg ccctttttgc aacaccaaat agagggcacg aatatgatct tccacaaaca
    21001 gccaatctct gacctgcaag ccgttgccgt aaacaggtag ggatttacct tctaaggcat
    21061 ttaaaatcat taacggaata agtttttcgg gatattggta tgccccataa ttattggaac
    21121 agttggtgat gacagtcggt aaaccgtagg tgcgatgcca agcccgagcc agatgatcgc
    21181 tggcagcttt agatgccgaa taggggctac ttggattata aggggttttc tcggtaaata
    21241 attcctcgct tttggctaaa tcaccataga cctcgtcggt cgagatatgt agaaagcgaa
    21301 acgccgattt ccttggctca ggtaacgtgt cccaataggc tctcgctgcc tctaataaag
    21361 tataagtgcc gacaatattg gtttgaataa aatctgctgc cccagaaata gagcgatcaa
    21421 catggctttc cgctgctaag tgcattacca catcaggctg atatttgcca aaaatctcag
    21481 aaatttgacc gcttgcacaa atatctgctt tttcaaaatg gtagcgttcg tgatgtgcga
    21541 cactctccaa tgaggctaaa tttcccgcat aggtgagctt atccacattg ataactgtgt
    21601 gtggagtatg ttcaatcaga tagcgaacta atgcagatcc gataaaaccg gctccgccag
    21661 tgatgaggat gatcataaag gtgaatatga aatttgattc acgaaatttc gtttgtattt
    21721 aatatggctt tgaatattct tttcagcgtc ttttttatcc caaatttgca attcccaagg
    21781 ataataaaag ttacttgaat tcttaaaata aatatgaata cccacatatt catctttatc
    21841 tctcaaatac caatttttta gtccatattt ttcttgccaa taatctaatg actccattac
    21901 ttgctgaatc acttcactag aaacaataat acgagctcca aaaatatcgt tgagaatgct
    21961 atttactgga taaccttcac tacgctgttt aaaacgctcg attttatcta aaatcgattc
    22021 tgaggttttt actcggtaaa aataagaaat tccctctaaa tctgcacgat ataaataatc
    22081 attaatagat tcgtgtaaat taagacgata agctaaaata tgtggcgtag gcactttggc
    22141 aaaagtatgc ttaagattca ctttttcaat cttacctgtt tcaaagtagt ctttcgaaaa
    22201 agctaagtgc aacttgttga tttcatcaat gagtttttct attttctcaa gcatgctatt
    22261 cactctctaa tttattatct tgccccaaat ccagttagca ttgttttcaa tgttttaaaa
    22321 ataattaaaa tatcaagcca taaagaaaaa tgcttaatat agtagaagtc atgttctact
    22381 tttacttttg tatcatcaac atctgccgca taaccttgga cgacctgagc ccaaccggaa
    22441 atacccggtt taacgatatg gcgataatta tagaatggaa tttcctcttc aaatttatct
    22501 acaaaggctg tctgttctgg gcgaggacca attaagctca tatcaccttt taatacatta
    22561 aaaaactgag gtagctcatc aatacgagtt ttacggataa atttcccaat acgagttacc
    22621 ctcatatccg cactcgaagc aaactgtgca tcatcttttt cggagtcttt acacatacta
    22681 cgaaatttat aaatattaaa ctcctttcca ccttgcccaa cgcgtttttg aataaacatt
    22741 gctccacctt cactttctaa gcgaatagca atagcggtga ttgtcataat aggtaaagta
    22801 atgggaaacg tagcaacaat caatgcaata tcaatgatac gcttcactaa tgagtaaatt
    22861 ggagaaggaa gtaatgaacc taagtcattt tcatacatat ggcgaatttt gacacgcccg
    22921 gttaaagatt cctcaagctg gcgaacgtta tatacaggaa taccattcaa tgtacatttc
    22981 gctaaaaatt tatgccattc tgcggacaaa tcaggatagt gtaaatctac cgcaatagag
    23041 ttaattctct tttcccccaa tattggttca cttaattgaa tccactctac attctgaatt
    23101 cggttcaaat tgatagctct tccgaatgga accaaagcga ttttagggat aatccaactt
    23161 cttgaaagaa aataaccaat aaaacaaaat agaattgtga gtataaagct cgtacctagc
    23221 aatgtattag aataatcaaa tctaaatatt gttaacacga ttaataaaac cgcataccaa
    23281 gaaataacgg tggaaaaaac aaaacttgct gacttattac ctggatattt cattaacact
    23341 cttaagctga tagctatcat tacaaaggca agagaagtcg ctataatcgt attagaacga
    23401 gtttcaatag aattaaattt ctctccccaa aaatagatag cgggtaagac acttgagaac
    23461 ataacgccca aaatactttg aacagctgta ctaaaaaaga tacgttcata ccaacgagag
    23521 tgtcttttct tttgctgaat gctcataatt tatccttttc ttaatttctt ataaagtctt
    23581 cctaaaagag atctaggcaa taaccgtggt aaggctctaa gtataaaaaa catgcttgat
    23641 gagattattg attgtaatcc caactctttt ttcaattttg ctaattggta ctcactctta
    23701 atgtaattcc accctttacg ccgagcgtac attgcagaac ctgaacgaac atttaccagt
    23761 acatctggta aattatacac ctcatatttc tgtgtaataa ctcgtaacca taaattgtaa
    23821 tcttccatat aaagatgatg ctgatagcct ccaacatgct cgatcacaga ttttttatag
    23881 gctactgcca tatggttaaa aggatttctt agtaatgctg aaatacgaat ttcatcatca
    23941 ttaatgggca cttgttttat acccagagaa ttagacattg tttcgtcaaa ttcttcaact
    24001 tgtcccccca ataaaaccac atcaggattt ttactaataa aatcaatttg cttttcaaat
    24061 cgagatggta agcaaatatc atcagtatcc attctaaaca cccactcatt agagcagtgt
    24121 tttaagcctt catttaaggc cggcctaaac ccacattttg tggtaaacta acaacaacaa
    24181 gcggtaattt ttcagtaaaa tgttgcacaa ttcgctctaa atctccagga attataccat
    24241 caaaaaccac aacaatttca cttgctggta aagtttggga tactaaagaa tctaaacaca
    24301 tctctaaata agctggtttt tctttataat acaaagatat taatatcgaa aacttcacaa
    24361 ctacttttcc cactttttca ac
//
LOCUS       DANLTI010000024        24086 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.024, whole genome shotgun sequence.
ACCESSION   DANLTI010000024 DANLTI010000000
VERSION     DANLTI010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24086
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.024"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            1..1083
                     /gene="prfA"
                     /locus_tag="PXB09_000761"
     CDS             1..1083
                     /gene="prfA"
                     /locus_tag="PXB09_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDL5232901.1"
                     /translation="MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQ
                     LEEVVGTFNRWKKLNNDIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLP
                     KDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYK
                     EIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN
                     PSDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLAS
                     RIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMN
                     GKIDELIQPIITEYQADQLAALSEQN"
     gene            1195..1797
                     /locus_tag="PXB09_000762"
     CDS             1195..1797
                     /locus_tag="PXB09_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232902.1"
                     /translation="MRKLGLLAVFTLVLSACSNSTKIEQTILSKQDIVGSWVCAIKYD
                     DLKVSTLDFSEFKANGEMTNFGDISDENFEPIKFTYVTGDKGKWDLKGNRLVIDYDLS
                     ERKVKRTTPKKFLEFLKQEERKASKTAKKLLKYEQGIFNILSDQKNTENSKIILDILK
                     FGHSRMAIQQNMGDKVYSGGCVTADKAEEYLDILKNRNSK"
     gene            1797..2663
                     /gene="prmC"
                     /locus_tag="PXB09_000763"
     CDS             1797..2663
                     /gene="prmC"
                     /locus_tag="PXB09_000763"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5232903.1"
                     /translation="MDYREWLTFAEQKLLENSGADPYLNAKFDANLLLQAVTKRSKSA
                     IFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPLKVSPATLIPRPDTE
                     RLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQIIGVDFQNEAVQL
                     AEENRRNLGLNQVTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLTVGDVRFEPLTA
                     LVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHLWEQVETAQDY
                     AGNDRVTKAILK"
     gene            2672..3538
                     /locus_tag="PXB09_000764"
     CDS             2672..3538
                     /locus_tag="PXB09_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDL5232904.1"
                     /translation="MDDIIEELLKELEDPKVTISETELKKFLYREILRLTTLIDKNVS
                     EQQVFGQMSALVKKARYNVNGEGDEERINQLLHLVYREWGFHCYYEDYFHTENLLLNQ
                     VIRKRRGMPVSLGAVALYLSAVLDLPLYPVNFPTQLVLRAEIHQPNGATKVRFINPWN
                     GEFLTIEMLNKWLEGEMGFGVEVTPDLLRRAEPQELLERVETVFKMALTREGKYEETL
                     RLIEYRLAFSPEDPYEIRDRGMVLASMDCYQAALEDINYFIDQCPEDPSAEILKMEVK
                     GLQQKSQESVVH"
     gene            3628..4482
                     /gene="kdsA"
                     /locus_tag="PXB09_000765"
     CDS             3628..4482
                     /gene="kdsA"
                     /locus_tag="PXB09_000765"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDL5232905.1"
                     /translation="MTDKIVKVGNIEVANHKPFTLFGGMNVLESRDMALRVCEQYVEV
                     TQKLNVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKQTFGVNIITDVHEIYQC
                     KPVAEVVDVIQLPAFLARQTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGN
                     DQVILCDRGTNFGYDNLVVDMLGFGIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRR
                     DQVTELARSGMAIGLAGLFLEAHPDPNSAKCDGPSALPLSKLEAFVSQMKAIDELVKS
                     FEEIDTSK"
     gene            4703..5650
                     /locus_tag="PXB09_000766"
     CDS             4703..5650
                     /locus_tag="PXB09_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDL5232906.1"
                     /translation="MLNIVFLDRTGIPATHDIPRPNFPHTWTEYATTSADQTFERVKE
                     ADIIITSKVLLQRDLLAKLPKLKLIAITATGTNNVDLAAAKELGIAVKNVTGYSSVTV
                     PEHVIGMIYSLKHRLADYHRDLITSDRWATCGQFCYVDYPIHDVRGSTLGIFGKGNIG
                     AEVARLAQAVGMQVIFAEHQGATEIREGYTAFEEVFKQADIISLHCPLTEQTQNLINA
                     ETLALMKPTAYIINTGRGPLIDEQALLEALEQGKIAGAALDVLVKEPPEKDNPLMLAA
                     KRLPNLLITPHVAWASDSAVTTLVNKVTQNMEEFVATGM"
     gene            5748..6920
                     /locus_tag="PXB09_000767"
     CDS             5748..6920
                     /locus_tag="PXB09_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDL5232907.1"
                     /translation="MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVL
                     SVMNGLENMQKTNLLSTLPHAIITPQEGHFAKGEKLALPEFAKQSVVINRANVIIQSS
                     QGINAGQLIGVENATDDPLLVAENIPALLPSGEFKVVIGSRLANKLNVTVGDKLRLMI
                     TENSQYTPLGRVPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRL
                     YLQDPFQVTELSQYFDAERYQISDWREQKGEFFQAVKMEKNMMGLLISLIIVVAISNI
                     VTSLSLMVVDKQGEIAILQTQGLTKKQVMQIFVFQGAIVGVIGSIIGGLLGVLIAYNL
                     DQIILLLNPSIHLPTLISGTQIAVIVGVSMLLSLLCTLYPAYRASKIEPAQALRYE"
     gene            6937..7620
                     /gene="lolD"
                     /locus_tag="PXB09_000768"
     CDS             6937..7620
                     /gene="lolD"
                     /locus_tag="PXB09_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDL5232908.1"
                     /translation="MTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSG
                     SGKSTLLHTLGGLDQPSTGEVWIRGQSLQQLSSDKLALLRNQNLGFVYQFHHLMADFT
                     ALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQRVAIARALV
                     NNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMR
                     DGVLSEGSL"
     gene            7617..8882
                     /gene="lolE"
                     /locus_tag="PXB09_000769"
     CDS             7617..8882
                     /gene="lolE"
                     /locus_tag="PXB09_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDL5232909.1"
                     /translation="MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLS
                     AMNGFERELNNRVLSVVPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSF
                     TALIENGAQLKIAQVRGVDPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGI
                     AKALEVEAGDEVTLLIPQPTEDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQ
                     ELMEYQANEVSGLEISLANPFDVQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQLIR
                     TVMYIAMVLVIGVACFNIISTLIMAVKDKQGDIAILRTLGANNGFIRRIFLWYGLISG
                     MKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLPSELHWQDVVYVLA
                     ATIILSLFASLYPANRAAKLEPAKVLSGH"
     gene            complement(8957..10888)
                     /gene="thrS"
                     /locus_tag="PXB09_000770"
     CDS             complement(8957..10888)
                     /gene="thrS"
                     /locus_tag="PXB09_000770"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDL5232910.1"
                     /translation="MPIITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGER
                     RDASDIISQDSTLEIITAKDEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGF
                     YYDIDLDRSLTQEDLDALEKRMLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAIL
                     DENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRI
                     YGTAWADKKQLAEYLQRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRE
                     LETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNC
                     PGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IESEVISCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGL
                     EYEIQEGEGAFYGPKIEFALRDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPV
                     MIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAG
                     IRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDL
                     VEILKNQIKARELKLLGEE"
     gene            complement(11055..12404)
                     /locus_tag="PXB09_000771"
     CDS             complement(11055..12404)
                     /locus_tag="PXB09_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5232911.1"
                     /translation="MNSTKFYSLYSGIFFLFFGYGLFLNSAGIKLAEMGITDIIIGLL
                     NAAFFIGAALSTIFAHRIVSSVGHIRSFSVFCAVFAIAALGHIMIDTLWIWGVLRIIL
                     GFCHYSLLLLVESWLSEKTNVDTRGKVLATYNIIFYLAFILGVSLLSLELSSRNIFIL
                     STILVVMSMIPIALTKMVQPDIPARERISIPKLFAISPLALATSFISGMLVNGFFTMA
                     SVFLLKFSFSLSEISLYLIISMIGGFISQMPMAILSNRIGRRNAILACSVIATLTALA
                     GLFAIFQENLTAWGQYIIAFFFGCSLFSLYALSIARANDELPNNMNTVEVSRGLLFCY
                     GVGALVAPPLIGFAMSLSAEYGFYALFGLFSLSLFICAFRTKSIPKAERAEMQYATPI
                     ATASPLEEIEVVEDALIPFDEEAVQEYQAQLEILEQDPQTENENIELDEGAAENSKV"
     gene            complement(12679..13170)
                     /locus_tag="PXB09_000772"
     CDS             complement(12679..13170)
                     /locus_tag="PXB09_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDL5232912.1"
                     /translation="MFTTQLIQTKRWLEANSITTFWLKTFIGATLLAIFAQISVPMYP
                     VPITGQTLALTVVGFAMGRKAATAAVLLYLFEGAIGLPVFAGGASGFHHFFGPTGGYL
                     LGYIPTAYFLGYYSDKGVLNSFWKSLFVALIASVITFAFGLAQLSLYQKAQYYKRAYI
                     HLF"
     gene            13251..14018
                     /locus_tag="PXB09_000773"
     CDS             13251..14018
                     /locus_tag="PXB09_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--protein ligase"
                     /protein_id="HDL5232913.1"
                     /translation="MVKPVYIYCDEGSSEIGVQSLLLAVKQHLQRPAYLINAKQIIQS
                     KFSDGCLLIMPGGADLPYCKKLNGEGNRRIRQFIEQGGAYLGICAGAYYGCAELNFVG
                     RDYSVNGNRELALFNGIAGIAKGSLPQFTNGQLYDKNIGSKAIVEVTLAEGGKMPFYY
                     HGGCCFEPNSTTVIYNPLAYYPDGSVAMIEGELGRGYYLLSGVHFELQAVVYWQKIVN
                     CCENLDIKTQEEAICSNFNVNYGSQIWQHLKQRLNQA"
     gene            complement(14009..14803)
                     /locus_tag="PXB09_000774"
     CDS             complement(14009..14803)
                     /locus_tag="PXB09_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDL5232914.1"
                     /translation="MRFFDTHTHLDYLAESLNLSIPELVENAKQHQVECILIVAVFAK
                     NFAKVTACAKQKPENLVYGLGLHPLYIQQHQQQDLILLENLLSQQDPQCTAIAEIGLE
                     KAVSEVSTPELWKKQCEFLEAQLSLAKKFNLPVNLHSRKSHDQLFVFLKKAQLTKTGV
                     VHGFAGSYEQAKRFVDLGYKIGVGGTITYERANKTREAIRKLPLESLLLETDSPDMPV
                     FGFQGQPNRPERLLVTFNSLCELRTESPNLIAETIWQNSERLFFYA"
     gene            complement(14864..16450)
                     /locus_tag="PXB09_000775"
     CDS             complement(14864..16450)
                     /locus_tag="PXB09_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDL5232915.1"
                     /translation="MLWFFFCVAVLVLGYFTYGKIIEKIFVINPKRATPAYAMNDGVD
                     YMPMSKTKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGML
                     SIRNGGATMPNLAGKFLGRPVKLFINVMALILLLLVGVVFVASPAQLLSTITMDIAGA
                     TQSAMELGDVEAIKESVASGGVTVWGMDKATVISVWTLIIFAYYILATLLPVDKIIGR
                     IYPFFGALLLFMSVGMVYGLVSAHLSATDPIDFFRTVNADGQGLTWEKFTQNFQVKGD
                     VPIWPLLFLTISCGALSGFHATQTPLMARCAQNEKEGRFIFYGAMITEGVIALVWCAV
                     GLSFYENPQALQDAISAGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRA
                     ARLQLAEIFGLEQRTLVKRLYIAVPLFVLGFIVSKVDFSVLWRYFTWANQMTAMVMLW
                     TAAGYLYRYKKFHWVCSIPAWFITTVCATYLANNKIGFGLDYELSVYIGFAITVVCVI
                     CFFAFLKPSEARDEDAYVTN"
     gene            complement(16636..18489)
                     /gene="dxs"
                     /locus_tag="PXB09_000776"
     CDS             complement(16636..18489)
                     /gene="dxs"
                     /locus_tag="PXB09_000776"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDL5232916.1"
                     /translation="MEKKYPLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTS
                     GHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIH
                     PFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEA
                     LNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT
                     IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQF
                     LHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKAAPTYSNIFGDWLCEMAERD
                     PKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSS
                     FLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPS
                     DENEMRKMLYTAYTMNTPSAIRYPRGNAKGVKLEPMQRLEVGKGNIIREGKKVAILNF
                     GALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFV
                     NEYLQNIGKIKPLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKIQKFDI"
     gene            complement(18534..19346)
                     /gene="suhB"
                     /locus_tag="PXB09_000777"
     CDS             complement(18534..19346)
                     /gene="suhB"
                     /locus_tag="PXB09_000777"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDL5232917.1"
                     /translation="MNPMLNIAIRAARKAGNIIAKGYEQSPQDTQVLQKNTNDYVTEI
                     DKAAEAAIIDVIRKSYPEHSIVTEESGVLNGSNENVQWVIDPLDGTTNFVKRLPHFAV
                     SIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRIDAERRDLKGTVIATGFP
                     FKVIRHRDAHLNMLEGLMNNGVADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAA
                     GELIAREAGAIVTNFVGGTDYLKTGNLVVGNGRVVKEILNSIQPTLTEELKA"
     gene            19527..20561
                     /locus_tag="PXB09_000778"
     CDS             19527..20561
                     /locus_tag="PXB09_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDL5232918.1"
                     /translation="MQFKENNQPRFKHREERRSDECSPRFSDKGKMRGNEGKSDRPHK
                     LHFKRDEAYSRSEQIYPAEGKKASGEGSVQIWVKGGNSSVKEKKNGPLSPRAPEKIKK
                     NRLEEMKVYGENACISLFQQRPESIVRLWATVEGAKKLGDLMSYLAQHKKAYHVIDRE
                     EMERVTGTEHHGDMCLLVKKTASFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIIRTC
                     AFYGVKGIITENVDSLNSSAAARVAEGGLEFVRALETKNKHIALVQLRQAGYQIVHLT
                     RHKQAPSLTKIKLAEKVVFVLSEIPASDVAYAEDTTIQLSFNNPLNSGLNVAVNAGIL
                     LNQWYQTHIL"
     gene            20571..21455
                     /locus_tag="PXB09_000779"
     CDS             20571..21455
                     /locus_tag="PXB09_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDL5232919.1"
                     /translation="MNQQKPFEVIAIVGTPRHDSAFETHLAVYNWLKDRDYQILVETE
                     VATQLQLKESYSLDQIGQRAELVIVIGGDGNMLGIARALAKYRVPLIGINRGNLGFLT
                     DIAPQTAFEQLYSCLVKNEYVIEERFLLEAFIERNGKIIAANNALNEIVVHPTQVARI
                     IEFEVYIDGKFAFSQRADGLIVATPTGSTAYSLSAGGPILTPNMNAMALVPMHPHTLS
                     SRPLVVDGDSQISLRFAKYNTPDLEVICDGQVNMHFTPEDRVLVRKSPDKLQLLHLKD
                     YSYFTVLGSKLGWASKLF"
     gene            21594..22571
                     /locus_tag="PXB09_000780"
     CDS             21594..22571
                     /locus_tag="PXB09_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDL5232920.1"
                     /translation="MTTNFKCQVHTIEFNEDYQPEQSTRLTTNFANLARGENRKQNLQ
                     NAIAMINNRFNDLANWDNPNADRYSVKLDIVSLDIDVEGKGEFFPAIEWLKTYVIDYK
                     TGKTIDGIIGNNFSSFVRDYDFSVLLLDHNKDKPQFSVPEGYGELHGKLFKHLLASPE
                     YTAKYKKPPVICLSVATTRTYTRTTNVHPILGVEYLQDSYSLTDAYFAKMGLKVRYFM
                     PPKSVAPYAFYFDENADLLNDYTNLELISTIATMEAFQKIYRPEIYNANSVAGQVYKG
                     SLTYQDYSVTKVEYDREERTQLAIKQGKYTEEHFIKRYQAILEAWATEE"
     gene            22659..23690
                     /locus_tag="PXB09_000781"
     CDS             22659..23690
                     /locus_tag="PXB09_000781"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5232921.1"
                     /translation="MSNILLPTSTAGSLPKPSWLAEPEKLWSPWKFEGEELLQAKRDA
                     LLVSLAEQIAAGIDIVSDGEQTRQHFVTTFIEHLEGVDFSKREIVRIRNRYDASVPSV
                     VGAVSRPKSVFVDDAKFLRAHTDKPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKI
                     LNEEAKELEAAGVDIIQFDEPAFNVFFDELNDWGVAALERAAEGLKCETAVHICYGYG
                     IKANTDWKQTLGNEWRQYEESFPKLQQSKIDIISLECQNSRVPMDLIELVRGKKVMLG
                     AIDVATNIIETPEQVADTLRKALQFVDADKLYPSTNCGMAPLSRQVAQGKLQALSQGA
                     AILRAEFAK"
     gene            23778..23999
                     /locus_tag="PXB09_000782"
     CDS             23778..23999
                     /locus_tag="PXB09_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232922.1"
                     /translation="MLNLFKKPIKKSSFEAWAKLMDDVAKVAILAIPVILYGEYSLLM
                     KFTHSITLFAVVYFLLATARLFRETAEEM"
BASE COUNT         7323 a         4893 c         5250 g         6620 t
ORIGIN      
        1 atgaaagatt cgattatcaa taaattagaa agtttaagtg aacgccacga agaactacag
       61 gcgttacttg gcgatgcctc aattatttcc gatcaagaca aattccgtgc ttattccaaa
      121 gaatattcgc aattagaaga agtggttggc acctttaacc gctggaaaaa gctgaacaat
      181 gatattgaag aggctcaatt attactcgat gatcctgata tgaaggatat ggcagcggaa
      241 gaaattgcgg aaaataaagc cgaaatcgag aatcttgagc aacatttaca aattttatta
      301 ttgccgaaag atccgaatga tgaatacaac gccttccttg aaatccgtgc cggaacgggc
      361 ggtgacgagg ctggtatttt tgccggtgat ttataccgta tgtacagccg ttattgcgaa
      421 agtaaacgct ggcgaattga agaaatgtcg gcaaatgaga gtgaacaagg cggatataaa
      481 gagatcatcg ttaaaatttc aggcgaaggc gtttacggtc agcttaaatt tgaatcgggc
      541 ggacaccgtg tacaacgtgt accgaaaacc gaatcacaag ggcgtattca cacctctgct
      601 tgcacggtag cggtaatgcc ggagttgccg gaaagcgaga tgccggaaat caatccatct
      661 gatctgcgaa ttgacaccta ccgctcatcg ggtgcaggcg gtcagcacgt taataccacc
      721 gactctgcag tgcggattac tcatatcccg accgggattg tggtcgagtg tcaagatgag
      781 cgttcacagc acaaaaataa agccaaagcg ctggcagtgt tagcctctcg gattgtacaa
      841 gttgagcaag aacgccaagc cgcagagcaa gcggataccc gccgtaactt acttggctca
      901 ggcgaccgtt cggataaaat ccgcacctac aactacccgc aagggcgtgt gactgatcac
      961 cgtattaacc tcacggttta tcgtttagac gaagtgatga acggcaaaat tgatgaattg
     1021 atacaaccga ttatcactga atatcaagcg gatcagttag cggcgttgtc ggagcaaaat
     1081 taattttatt gtaagggtac actgtgtgtg cctgccaaat ataaatttgc aaaattttga
     1141 ctatttttga tcgcttgtag tttctaaaaa gtttaaaaat ttgaggaaaa caaaatgaga
     1201 aagttaggtt tattagcagt atttacttta gtattatcag cctgttcaaa ttcaacaaaa
     1261 attgaacaaa ccattctttc caagcaggat atcgtaggct cttgggtatg cgctattaaa
     1321 tacgatgatc taaaagtaag cactttagat ttttctgaat ttaaagctaa tggcgaaatg
     1381 acgaatttcg gtgatatttc tgatgagaat tttgagccca ttaaatttac ttatgtaaca
     1441 ggagataaag ggaagtggga cttaaaagga aatcgattag tgattgatta tgatctttct
     1501 gaacgtaaag taaaaagaac aacaccaaaa aaatttttag agttcttgaa acaggaagag
     1561 cgtaaagcct caaaaacagc taaaaaactc cttaaatatg aacaagggat tttcaatatt
     1621 ctgagtgatc agaaaaatac tgaaaacagt aaaataatat tagatatttt gaagtttggt
     1681 cattcaagaa tggcgattca gcaaaatatg ggagacaaag tttattcagg tggttgtgta
     1741 acagctgata aagcagaaga gtatttagat atcctaaaaa atagaaattc taaataatgg
     1801 attaccgaga gtggctcact tttgctgagc aaaaattact tgaaaatagc ggggcagatc
     1861 catacctaaa cgcaaaattt gatgcaaatt tgctattgca agcagtcaca aaacgttcaa
     1921 aatcggccat ttttgctttt tcggaaaccc tactttctga aagcgagctt gcagaattag
     1981 cggaaaaatt agctcggcgt gccaaaggtg aaccaatggc atatatttta ggctatcggg
     2041 aattttggtc gttgccgtta aaggtttcac cggcaacgct gattcctcgc cctgatacgg
     2101 aacgactggt tgagttggcg ttggaatatg ctaacaagcg gttaggaaat cagaaaatgt
     2161 tgcaaattct ggatctcggt accggcacgg gggcgattgc gttggcactg gcgagtgaat
     2221 taggcgagaa agcccaaatt atcggggtgg atttccaaaa tgaggcggtg caactggcag
     2281 aagaaaatcg ccgaaactta ggcttaaatc aagttacatt tttacaaagc gattggttca
     2341 gttcgcttgc aaatcaacaa tttgatttaa ttgtctcaaa tccgccttat attgatgaat
     2401 cggacgaaaa tttgacggtg ggagacgtac gttttgaacc tttaaccgca ttagttgccg
     2461 ataataaggg gttgagcgat ttgcaaaaaa tcatcgaaaa tgcaccgctt cacttaaaac
     2521 cgcaaggggc gttaatgctg gaacacggct ggaaacaagg taacttggtt cgagatttat
     2581 ttgatttaca cttgtgggaa caggtagaaa ctgctcaaga ttatgccggc aatgaccgag
     2641 taaccaaagc gattttaaaa taaggcagaa aatggacgat attattgaag aattgttaaa
     2701 agagttggaa gatccgaaag taaccatcag cgaaaccgag ctgaaaaagt ttctttatcg
     2761 tgaaatttta cgattaacta cgctcattga taagaatgta agtgagcaac aagtgtttgg
     2821 tcagatgtct gcgttggtga aaaaagctcg ctataacgtg aatggcgaag gcgatgaaga
     2881 gagaattaac caattacttc atttagtcta tcgtgaatgg ggctttcatt gctactatga
     2941 agactatttc cacaccgaaa atttgttgct aaatcaagta attcgcaaac ggcgtggaat
     3001 gccggtttca cttggggcgg tggcgcttta tttatccgcc gtattggatt tgccgcttta
     3061 cccggttaat tttccgactc agcttgtgtt acgggctgaa atacaccagc cgaacggggc
     3121 aaccaaagtg cgttttatca acccgtggaa cggtgaattt ctcaccatcg aaatgctgaa
     3181 taaatggctg gaaggagaaa tgggctttgg cgtagaagtt acccctgatt tgttaagacg
     3241 agcagaacca caagagttgc tggaaagggt cgaaactgtg tttaaaatgg cacttacccg
     3301 tgaaggcaaa tatgaagaaa ccttacgctt gattgaatac cgcttggcat ttagcccgga
     3361 agatccgtac gaaatcagag accgaggaat ggtactggca agtatggatt gctaccaagc
     3421 agcattagaa gatattaatt atttcattga ccaatgccct gaagatcctt ctgccgaaat
     3481 tttaaaaatg gaagtgaaag gactgcaaca aaaaagccaa gaaagtgtgg tgcattaagc
     3541 tgagaagtag ccccaaaggg gctgagctat gattaaccta gtacggctct gccgtgctag
     3601 gcagaaaata agaaacaagg actccctatg acagataaaa ttgtaaaagt tggcaatatt
     3661 gaagtggcta atcacaaacc gtttacgctt tttggtggta tgaatgtgct ggaaagccgt
     3721 gatatggcac ttagagtatg tgagcaatat gttgaagtca cgcaaaaact aaatgtgcct
     3781 tatgtgttca aagcctcatt tgacaaagca aaccgttctt caatccactc ttaccgtgga
     3841 ccgggaatgg aagaaggctt aaagattttc caagaattaa aacaaacctt tggcgtgaac
     3901 atcattaccg atgttcacga aatttaccaa tgtaaacctg tggcagaagt agttgatgtg
     3961 attcaactac cagcattttt ggctcgccaa accgatttag tggaagcaat ggctcgtacc
     4021 ggtgcggtta ttaacgttaa aaagccgcaa tttttaagcc cgggtcaaat ggggaatatc
     4081 gtagaaaaga ttgctgaatg cggcaacgat caagtgattt tgtgcgaccg tggcactaac
     4141 tttggctacg ataatctagt tgtggatatg cttggtttcg gcattatgaa aaaagtgtcg
     4201 aaaggttgcc cggtgatttt tgatgtgact cactcattac aatgccgtga tccattcggt
     4261 gcggcttccg gtggtcgcag agatcaagta accgaactgg cacgctccgg tatggcgatt
     4321 ggtttagccg gcttgttctt agaagctcac ccggatccaa actcggcgaa atgtgatggt
     4381 ccatctgcat taccgctgtc aaaattagaa gcctttgttt cacagatgaa agcgattgat
     4441 gagttggtta agagctttga agaaattgat acttccaaat aaactttctc cgcattaaat
     4501 cctttcctac tttctttgct tcgccaaaga aagtaggcaa agaaaggcga ccctacttcg
     4561 ctacttttct tcgcttagtg tgaatgggct taacgaaaaa tttacattcg cttcgctcag
     4621 agtaaatttt cctacccatt aaaacacgct caggtagctc agaagggagt tagaaaggta
     4681 aaagacagaa taggagaaaa aaatgctaaa tattgttttt cttgaccgta ccggtattcc
     4741 tgccactcac gatattcctc gtccgaattt tccacatact tggacggaat atgccaccac
     4801 ctctgccgat caaacttttg agcgggtaaa agaagcggat attatcatta ccagcaaagt
     4861 gttactccag cgtgacttgc tggctaaatt accaaagctg aaattaattg cgatcacagc
     4921 aaccggcacg aacaatgtgg acttagcggc agcaaaagag ttagggattg cagtgaaaaa
     4981 tgtaaccggc tattccagcg ttaccgtgcc ggaacacgtc attggtatga tttactccct
     5041 gaaacatcgt ttagccgatt atcaccgtga tttaattacg tctgaccgct gggcaacttg
     5101 cggccaattt tgctatgtag attacccgat ccacgatgtg cgaggctcaa ccttaggcat
     5161 tttcggtaaa gggaacatcg gggctgaagt ggcacggctg gcacaagcgg tcggaatgca
     5221 ggttattttt gcagaacatc aaggcgcaac tgaaattcga gaaggctaca ccgcctttga
     5281 agaggtattc aaacaagcag atattatttc actacactgc cctttaaccg agcagactca
     5341 aaacctgatt aatgcagaaa ccttagcctt aatgaagccg accgcttata ttatcaatac
     5401 gggtcgaggc ccactgattg atgaacaggc attgcttgag gcattagagc aaggcaagat
     5461 tgccggcgct gcgttagatg ttttagtgaa agagccgcct gaaaaagaca accctttaat
     5521 gttagccgca aaacgtttac cgaatttact gattacccca cacgttgcgt gggcaagcga
     5581 ttctgcggtt acaacactag tgaataaagt gacacaaaat atggaagagt ttgtagcaac
     5641 gggtatgtag cttgaagtag gggctggtcc tgtgccagcc ctaatattaa tagaatgaga
     5701 gggcgggtat aaaacccgcc cctaccaata tcattttaga aaaacagatg aatttaaccc
     5761 ctttttttat tgcttttcgc tattttagat cgaaaagtgc tgaccgtttc gggcggttag
     5821 tcaccaatct tgccagcctt ggcattgtgc tgggcgtaat ggcattggtg attgtgctgt
     5881 cggttatgaa cggtttggaa aatatgcaga aaaccaatct gctatccacc ttgccgcacg
     5941 ctatcatcac ccctcaagag gggcattttg ccaaaggtga aaaactggct ctacctgaat
     6001 ttgccaagca aagtgtggtg attaaccgtg cgaatgtgat tatccaaagt tcacaaggca
     6061 ttaacgccgg tcagttaatc ggcgtggaaa atgccacaga cgatccgttg ttagtggcgg
     6121 aaaatatccc cgcattattg cctagcggtg aatttaaggt agtaattggc tctcgtttag
     6181 ccaataaatt gaacgttacg gtaggcgata agctccgctt aatgatcact gaaaacagcc
     6241 aatatacgcc acttgggcga gtgccggtac agcgtttgtt tgaaatttcg ggcgtttatc
     6301 aatctaatcg tgaagcgagc gaatttaccc tctttgctaa tttagctgat gtcgggcgtt
     6361 tgcttcgcat cagcgaagat caagtacaag gcgtgcgttt atatttgcaa gatcctttcc
     6421 aagttaccga acttagccaa tatttcgatg cagaacgcta ccaaatcagt gattggcgtg
     6481 agcaaaaagg cgaatttttc caagcggtga aaatggaaaa aaatatgatg ggcttactca
     6541 tcagcctgat tattgtggtt gcaatttcca acattgtgac ttcactcagt ttgatggtgg
     6601 tagacaaaca gggcgaaatt gcaattttac aaacccaagg cttaaccaaa aaacaagtga
     6661 tgcagatttt tgtgttccaa ggggcgattg tcggagtaat tggctcgatt attggtggtt
     6721 tgctcggcgt attgatcgcc tacaatttag atcagattat cctgctatta aacccgagca
     6781 tccatctgcc taccctaatt tcaggcacgc aaattgcggt cattgtaggg gtgtcgatgt
     6841 tgctttcact cctttgcacg ctttacccgg cataccgagc ctcaaaaatt gagccggcac
     6901 aggcattgag atatgaataa taagaacgga aataaaatga cagaattact tcgctgtgaa
     6961 catatcagca aattttacga tgagggcgaa cagaaagttc aggtgctaaa agaggtgtca
     7021 ttttcgatga acgaaggtga gctggtagcg attgtcggta gttcaggttc cggcaaaagc
     7081 accctattgc acacattagg cgggctagat cagccaagca ccggtgaagt ctggattcga
     7141 gggcaatctc tgcaacagct cagttcagac aaattagcgt tattgcgtaa ccaaaactta
     7201 ggctttgtgt accaatttca tcacttaatg gcagacttta ccgcccttga aaatgtgatg
     7261 atgccgatgc tgatcggcaa acagaacaaa actgaagctg ccaatcgtgc cgagaaaatg
     7321 ctacaagcgg tcggattagc tcatcgaatg acacatcgcc catcagcact ttcaggcggc
     7381 gaacgccaac gggtggcgat tgcccgagcg ttggttaata atccggctct ggtacttgcc
     7441 gatgaaccga ccggtaattt agaccaaaaa accactgaaa gcatttttga gctgattcaa
     7501 cagctcaacc aagagcagaa cattgcgttt ttattagtaa cgcatgattt aaatctagcg
     7561 aataaacttt cacgtagtct tgtaatgcga gatggcgtgt taagcgaggg gagcttatga
     7621 gtacgccgtt tttcattagc tggcgttacc aacggggcaa acagaaaaac aaactggttt
     7681 cactgattgc tctcttttcc aacatcggta ttgcccttgg ggttgcggta ttaattatcg
     7741 ggctaagtgc aatgaacggc tttgagcgag agctgaataa tcgtgtgctt tcggttgtgc
     7801 cacacgctga actggtttcg tttcaaggca atcagcctca accaattttt gatagcaaaa
     7861 aattagaggc attgataaaa aaatcgcaaa atgtgaccgc tagttcgcct tttgtcagct
     7921 ttaccgcctt aattgaaaat ggggctcagc ttaaaatcgc ccaggtgcga ggggttgatc
     7981 ctaaaaagca agatcaggcc agccaattaa gccaatttat tccacccgag caatggcaag
     8041 cgttcaatca gcaatttcaa gccgatgaag atggcttgat tttaggagcc ggtattgcca
     8101 aagcgttaga agttgaggca ggagacgaag ttacgctttt aattcctcag ccaacagaag
     8161 acggcaaatt agcccagccc ttgcgtttta acctaaacgt aaccggcatt ttgcggctag
     8221 atgggcagct ggatcacagt tatgccttaa ttccactgaa taaagctcaa gagctgatgg
     8281 aataccaagc gaatgaagtg tcagggcttg aaatcagcct tgccaatccg tttgatgtac
     8341 aacagcttga aatgccacaa cttaacggct atacccaacc gctttatttg aatacgtgga
     8401 ttgataaatt cggttatatg tataacgata ttcaactgat tcgcaccgtg atgtacattg
     8461 caatggttct cgtgattggc gttgcctgtt ttaatattat ttccaccttg attatggcag
     8521 tgaaagacaa acaaggcgat atcgcgattt tacggacact gggggcaaat aacggtttta
     8581 tccgccgcat tttcttatgg tatggcttaa tttcaggtat gaaaggggcg ttattcgggc
     8641 tgattttagg tgtaatttta tcgctaaatt taaccgctat tatcaaagcg attgaagcat
     8701 tctttgaggt gaaattgctt tcagacgggg tttattttgt tgatttctta ccaagtgaat
     8761 tacattggca agatgtcgtc tatgtattgg cagccacgat tatcctaagc ctttttgcca
     8821 gcttataccc tgccaaccga gccgctaaat tagaaccggc aaaagtgtta agtgggcatt
     8881 aatcattttc ctattctaat aaaaaagcag ctacccctcg attatgtcag aaaggtagct
     8941 gcttttattt atgttattac tcttcgccta ataatttcaa ctcacgagcc ttaatttggt
     9001 tttttagaat ttcaactaag tctgaaacga ggtaagtacc taagtctgca cctttacggg
     9061 tacgcacaga cactttacct tcggcgattt ctttatcacc gcaaaccaac atataaggca
     9121 cacggcgtaa ggtgtgctca cgcactttga agccgacttt ttcgttgcgt aagtctgctt
     9181 tcacacgaat gcctgcatca gaaagctgtt tcaccacttg ttgcacataa tctgcttggc
     9241 tgtcggtaat gttcattacc actgcttggg ttggggcaag ccaagttggg aagaaaccgg
     9301 catattcttc ggtgataatc ccgatgaaac gttcgatcga gcctaaaatc gcacggtgaa
     9361 tcattaccgg tgtgcggcga ccattatctt ctgctacata agaggctgct aaacgacccg
     9421 gtagagcgaa gtcaagttgc actgtgccac attgccattc acgtcctaag caatcacgca
     9481 atgcaaactc aattttcggc ccgtagaatg caccttcgcc ttcttgaatt tcatattcaa
     9541 gtccgttgtt gcgtaaggcg ttggctaagc ctttttctgc tctgtcccac attgcatcat
     9601 caccgatacg gttttccgga cgggttgaaa gttttactgc aatgttagta aaaccgaagg
     9661 tgctgtaaat gtcgtacacc attttgatac agctgattac ttctgactcg atttgttctt
     9721 cagtacagaa aatatgggca tcatcttggg taaaaccacg cacacgcatt aagccgtgta
     9781 atgaaccgga cggctcgtta cggtgacacg aaccaaattc cgccatacgg atcggtaaat
     9841 cacggtaaga tttcaagcct tgattaaaga tttgaacgtg acccgggcag ttcatcggct
     9901 taattgcata ttcacggttt tccgattggg tagtgaacat taaatctgcg tagttttgcc
     9961 agtgtccggt tttttcccaa agcacacgat ccatcataaa cggacctttt acttcttggt
    10021 aatcgtactc tttcaatttg gtacgcacaa aagtttcaag ttcacggaaa atcgtccagc
    10081 cgtcattgtg ccagaacacc atacccggtg cttcttcttg catatggtat aaatctaacg
    10141 ctttaccgat acggcggtgg tcacgttttg ccgcttcttc caaacgttgt aaatattcgg
    10201 ctaattgttt tttatcagcc caagctgtac cgtaaatacg ttgtagcatt ttatttttgc
    10261 tgtcgccacg ccagtaagca cccgctactt tttgtaattt gaagtggtgg cagaaacgca
    10321 tatttggtac gtgtggacca cggcacatat caatatattc ttcgtggtga tataacgcag
    10381 gcgttgccgt acgttcaata ttttcatcta aaatcgccat tttgtatggc tcaccacgtt
    10441 tctcaaaggt atctcgagct tcttgccagc ttaccgggcg ttttaccacg tcatagttgg
    10501 tttttgccag ctctaacata cgcttttcaa gagcgtctaa atcttcttga gtcaaagagc
    10561 ggtctaaatc gatatcgtag tagaaaccgt tttcgatagt cgggccgata gccattttaa
    10621 cgtctgggaa taattgcttg atggagtgac ctaacaagtg agcggttgag tggcgaatga
    10681 tctctaaacc atcttcgtct ttggcagtaa tgatttcaag tgtgctgtct tggctgatga
    10741 tatcagacgc atcacggcgt tcaccgttta cacgaccggc aatggtggct ttcgctaaac
    10801 ctgccccgat agattgggca acttccatta cagaaactgg gttgtcaaat gaacgttgtg
    10861 aaccgtccgg taaagtaata attggcataa taaatcctta cagtggtaat ccatacgaga
    10921 gattacttgt gttgtttgaa tgaaaaaacc gcctacaagc ggtctttttt gattaaaatt
    10981 ttgcaatttg cttattattt cccttacaag tggggaataa aagcactgaa attctagcat
    11041 aaaacaaaga aaaattaaac tttgctgttt tcagcggccc cttcatcaag ctcaatattt
    11101 tcattttctg tttgtggatc ttgttcaagt atttcaagct gagcctggta ctcttgtacc
    11161 gcttcttcat caaatggaat aagtgcgtcc tcaacaactt caatttcttc aagtgggctt
    11221 gcggttgcaa ttggggtagc atattgcatc tctgctcgtt ccgctttcgg aattgatttg
    11281 gtgcggaaag cacaaataaa taaactaagt gagaacagtc caaaaagtgc ataaaagcca
    11341 tattcagcgg aaaggctcat cgcaaaaccg ataagcggtg gagcaactaa cgcccccaca
    11401 ccatagcaaa acagtaaacc cctgcttact tcaaccgtgt tcatattatt cggcaattca
    11461 tcgttggcac gggcaatgct caaagcatat aagctaaaca gactacagcc aaagaaaaag
    11521 gcgataatat actgtcccca ggcggtcaaa ttttcttgga aaattgcaaa taatccggca
    11581 agtgcggtta aagtggcaat cactgaacaa gctaaaatgg cgttacgtct gccaatacga
    11641 ttcgataata tcgccatcgg catttggctg ataaaaccac cgatcatcga gataatcaaa
    11701 taaagcgaga tttcacttaa tgaaaagcta aacttcagca gaaagactga cgccattgta
    11761 aaaaagccgt ttaccaacat tccgctaata aagctggttg ctaaggctaa cggtgaaatc
    11821 gcaaatagtt taggaatact aatgcgctct cgagccggaa tatcaggctg aaccatttta
    11881 gttaaagcaa ttgggatcat cgacatcaca accaaaatgg tagataagat aaaaatgttt
    11941 cggctactaa gttctaaact taataaactt acgcctaaaa taaaggcgag atagaagata
    12001 atgttataag tggcaagcac tttgcctctg gtatcgacat tggttttttc gcttaaccaa
    12061 ctttcgacta aaagcagcaa gctataatga cagaatccca aaataattcg taacacgccc
    12121 cagatccaca aagtatcaat cataatatga ccgagagcgg cgatagcaaa aacagcacag
    12181 aaaacgctaa atgaacggat atgcccaaca cttgatacaa tgcggtgagc aaaaatagtg
    12241 cttaatgccg ccccaataaa gaaagcagcg ttaagtaaac cgatgatgat gtccgttatc
    12301 cccatttctg ccagtttgat ccctgctgaa tttagaaata aaccgtagcc gaaaaacaga
    12361 aaaaagatac ctgaataaag ggagtaaaat ttagtgctat tcatcaatgc tccttcaaac
    12421 attctgccag tattaaatca ttgtaccgat ttaatacctt ttaggcaaaa aagttattat
    12481 tagcgttgag aaaataactt ttggctattt tgattaaaaa atcaaatgaa ggtgattttg
    12541 aaatgtagta aaaaatagag caatcagaat tgaaaaaggg tttgccgtaa caaagccttt
    12601 agaaagatta gagtttcgag aagaatttgt agcttgggct aaccaaaaca cttgctagga
    12661 gtgctttaag cacaccacct aaaataaatg gatataagcc cgcttgtaat actgtgcctt
    12721 ctggtacaaa gaaagttgag ccaagccgaa agcaaaggtg atcacacttg caattaaggc
    12781 gacaaataaa cttttccaaa aagagtttaa tacgccttta tcgctataat agcctaagaa
    12841 ataggcggtt ggaatatagc ctaataagta tccgcctgtt ggaccaaaga aatgatggaa
    12901 acctgaagca ccgccggcaa agacaggtaa accaatcgcc ccttcaaaaa gataaagtaa
    12961 tactgcagca gttgcggctt tacgacccat tgcaaaacca accacagtta aagcaagtgt
    13021 ttgccctgta atgggtacag ggtacatcgg cacagaaatt tgtgcaaaaa tagcaagcag
    13081 tgttgctcca ataaaagttt tcaaccaaaa tgtagttata ctattggctt ctagccaacg
    13141 tttagtttga attaattgcg tagtgaacat aatcctctcc tttaatatgg ttaaaatgtt
    13201 ctcaaccgat tatataagaa gatgtctttt agggtaagag tgaatttaaa atggtaaaac
    13261 cagtttatat ttattgtgat gaaggtagca gtgaaattgg tgttcaatca ctgttattgg
    13321 cagtaaaaca gcatttacag cgtccggctt atctcatcaa tgccaaacaa attattcaaa
    13381 gcaagttttc cgatggctgt ttattaatca tgcccggtgg agccgattta ccttactgca
    13441 aaaaattaaa cggagaaggc aatcgtagaa tccgccaatt tattgaacaa ggtggagctt
    13501 atctcggtat ctgtgccgga gcttattatg gctgtgctga attgaatttt gtagggcgtg
    13561 actatagcgt aaatggtaat cgagaactag ctttatttaa tggcattgcg ggcattgcga
    13621 aaggcagtct gccgcagttt accaacgggc aactttacga taaaaacatt ggtagcaaag
    13681 cgatagttga agtaacactt gcagagggtg gaaaaatgcc gttttattat cacggtggtt
    13741 gctgttttga accaaattca acaacagtga tttacaaccc gttggcttat tatcctgatg
    13801 gctcagtagc aatgatagag ggagagctag ggcgaggtta ctatctgttg tcgggtgtac
    13861 attttgaatt acaagcggtc gtttattggc aaaaaattgt aaattgctgt gaaaatcttg
    13921 acataaaaac acaagaagaa gcaatttgct ctaattttaa tgtaaattat ggctcgcaaa
    13981 tttggcaaca tctaaagcaa cgactaaatc aagcgtaaaa aaataacctt tcgctattct
    14041 gccaaatggt ttctgcaatc agatttggtg attctgttct taattcacat agactattga
    14101 aagtcactaa aagccgttcc ggtcggttcg gctggccttg aaagccaaac accggcatat
    14161 cgggcgagtc ggtttccagt agtaaacttt caagaggtag tttgcggata gcctcacggg
    14221 ttttgttagc acgttcatag gtaatagttc cccccacacc aattttataa ccgagatcga
    14281 caaaacgttt tgcctgttca tagctgccgg caaagccgtg aaccacaccg gttttggtta
    14341 gttgggcttt tttgaggaac acaaaaagtt gatcgtggct tttacgtgaa tgaagattaa
    14401 cgggtaaatt aaattttttc gcaagggaaa gttgtgcctc taaaaattca cattgctttt
    14461 tccataattc aggggtagaa acttcactta ccgctttttc caaaccgatt tcggcaatag
    14521 cggtacactg tggatcttgt tggcttagca aattttccaa taagattaaa tcttgttgtt
    14581 ggtgctgttg aatatacagt ggatgcaacc ctaatccata caccaaattt tccggttttt
    14641 gtttggcaca agcggtcact tttgcaaaat tttttgcaaa tacggcaacg ataagaatgc
    14701 attcaacctg atgctgtttg gcattctcaa ccaattccgg aatgcttaaa ttcaggcttt
    14761 ctgcgagata gtcgaggtga gtatgagtgt caaaaaatcg cataataaaa ccaataaaaa
    14821 cggggactag attgtcccca tttttagcat tttacgcaag caattagttt gttacataag
    14881 catcttcatc acgagcctca gatggcttga ggaaagcaaa gaagcaaata acacaaacta
    14941 ccgtaatcgc aaaaccgata taaactgata attcataatc taaaccgaag ccgattttgt
    15001 tgttcgcaag gtaagttgca cacacggtag tgataaacca tgcaggaatc gagcataccc
    15061 agtggaattt tttatagcgg tataagtaac ctgcggcagt ccataacata accattgcag
    15121 tcatttggtt tgcccaagtg aagtaacgcc ataatacgct gaaatcaact tttgagacaa
    15181 tgaaaccaag tacgaataat ggtacggcaa tatacaaacg ttttactaag gtacgttgtt
    15241 ctaaaccaaa gatttccgct agttgtaaac gagcggctcg gaatgcagtg tcacctgagg
    15301 tgattggtaa tactacaacg cctaatacgg caaaaatacc accgataaac cctaagaagt
    15361 gtaacgagct gtcatatacc actttagacg gtgaaccggc agagatcgca tcttgtaagg
    15421 cttgtgggtt ttcatagaat gaaagaccta ctgcacacca tactaatgca attacccctt
    15481 cagtaatcat tgcaccgtag aaaataaaac gaccttcttt ctcattttgc gcacagcgag
    15541 ccattaatgg ggtttgggtt gcgtggaaac cggataatgc tccgcaagaa atagttaaga
    15601 atagtaatgg ccaaattgga acatcacctt tcacttggaa gttttgggtg aatttttccc
    15661 acgttaagcc ttgaccgtct gcattcactg tacggaagaa gtcgatagga tcagtcgcac
    15721 ttaagtgagc gctgactaga ccatatacca tacctacaga cataaagagt aataatgctc
    15781 cgaagaaagg ataaattcga ccgatgattt tatcaacagg tagtaatgta gcaagaatat
    15841 agtaagcaaa aatgattaac gtccacacag aaatcacggt tgctttatcc ataccccaaa
    15901 cggttacgcc acctgatgct acagattctt taattgcttc aacatcacct aattccattg
    15961 cactttgggt tgcacctgca atatccatgg tgatggtaga gagtaactga gcagggcttg
    16021 caacgaaaac tacgcctact aataaaagca agatgagcgc cattacgttg atgaataact
    16081 tgactggacg acccaagaat ttccctgcca gatttggcat cgttgcgcca ccgttgcgga
    16141 tacttaacat accacagaag tagtcgtgta ctgcaccggc aaaaatacaa ccaatcacaa
    16201 tccaaagcat tgcaactggt ccgtataagg caccaagtat tggtccaaaa atagggccgg
    16261 taccggcaat gtttaataat tgaatcagcc aaatcttggt tttagacatt ggcatatagt
    16321 caacaccgtc gttcattgca taagccggcg ttgctctttt cgggttaatc acgaagattt
    16381 tttcaatgat ttttccgtaa gtaaagtagc caagaacaag cacggctaca cagaaaaaga
    16441 accacaacat agtagaaatc ctataaattg agataaatga tcatttttag cagaactgat
    16501 aaaggcgtgc cattgtaagt gaggagtgag gataaagtaa aatgaattgt tagatttgtg
    16561 tgaataattt actgaaaatg tgaggttcat caaaaaatcc ctttgttctg cgtcaatcaa
    16621 agggactttt taaagttaaa tatcgaattt ttgaattttc gcttcaatgc cttgggcatc
    16681 taatccaaga tcggcataag cttcagcttg agtagattgg ggaacgaaaa agtcaggaat
    16741 accaagcatt acaagcggtt tgattttgcc gatattttgc aaatattcat tcacaaaact
    16801 acctgcgcca ccttgaatag cattttcttc aagcgtaact aacaactcgt gtgaatccgc
    16861 cactttttga agtaatgctt catctaatgg tttaatgaaa cgcatatcta ccaacgtgta
    16921 gttatgtttt tcagccacaa tctttgcttc atcaagcaaa gcaccaaaat ttaaaatcgc
    16981 aactttttta ccttcacgaa taatgtttcc tttacctact tcaagtcttt gcattggctc
    17041 aagttttacc cctttagcat tgcctcgagg gtaacgaata gcacttggcg tattcatcgt
    17101 gtaagcggta taaagcattt ttcgcatttc attttcatcg ctcggtgcca taatggtcat
    17161 attgggaata caacgcataa aacttaaatc aaatgcacct tggtgagttt gcccgtcagc
    17221 gccgacaatt ccggctcggt caatcgcaaa aatcaccggc aggttttgaa tagcaacatc
    17281 gtgaattaat tggtcataag ctcgctgcaa gaagctggaa taaattgcga ctaccggttt
    17341 gtaacctgcg attgctaagc ctgccccgaa agtcactgcg tgttgttcgg caatcgccac
    17401 atcaaaatat tgttcaggga aacgtttgga aaattctacc attcccgagc cttcacgcat
    17461 tgccggcgta atgccgataa ttttcggatc acgctctgcc atttcacata gccaatcgcc
    17521 aaaaatattg gaataagtag gtgctgcttt tgattttggt aactcggctg cggtagggtc
    17581 aaatttcgga acgccatggt agccaatcgg atcattttcc gcaggtgtgt agcctttgcc
    17641 ttttttcgtg cgaatatgca gaaattgagg gcctttcagc tcacgcatat tgctcaaggt
    17701 tttgactaac tcgtcaatat tatgtccatc aatcgggccg atataattaa agcctaactc
    17761 ttcaaacaaa gtgctttcag gggagaaaat cacccctttc atatgctctt cgcttttttt
    17821 cataaagttt ttgatggtag gcactttatc taaaattttc ttactgccgt cacgcactga
    17881 agtatagagc gaaccagaaa aaatgcgggc aaggtggttg tttaatgccc cgacattttc
    17941 agagattgac atttcattat catttaagat aaccaacata tcggtatgca atgcacctgc
    18001 gtggtttaat gcttcaaatg ccattccggc agtgattgca ccatcaccga ttacacagac
    18061 ggttttacgg ccggcatttt ctttttctgc tgccaccgca atgccaagtc cggcactgat
    18121 cgaagtagaa gaatgcccaa cgcttaacac atcgtaaggg ctttcttcac gccaagggaa
    18181 ggggtgaata ccatcttttt ggcggatagt gtgcatttga tctcggcgcc cagtaaggat
    18241 tttatgtggg taagcttgat gaccaacgtc ccaaattaat tggtcgaaag gcgtttgata
    18301 aacataatgc aaagctaccg taagctctac tacccctaag ccagaggcta aatgtccgct
    18361 agtttgactg actgattcca ataaataggc tcgcagttca tcaactacgg tttgaagctg
    18421 gtctttagaa agtaaacgta aatcttccgg tgagttgatt tcgcttaaca gaggatactt
    18481 cttttccata atgttttatt acccacaacc atcaaataat agatgatatt aaattaagct
    18541 ttgagttctt cggtcaaagt aggctgaatg ctatttaaaa tttctttaac cacacggccg
    18601 ttaccaacaa ccagattacc tgttttcaag taatctgttc cgccaacaaa gttagtcaca
    18661 attgcaccgg cttcacgggc aataagttca ccggcggcga aatcccacgg ttttaagccg
    18721 atttcaaaga aaccatcaac acgacccgct gcaacatagg caagatctaa agcggcagaa
    18781 ccggtacggc ggaaatcagc tactccgtta ttcattaagc cttcaagcat atttaaatgt
    18841 gcatcacgat gtctgatgac tttgaaagga aaaccggttg caattacagt gccttttaaa
    18901 tcacggcgtt ctgcatcaat gcgtaaacgg aactcgttta atttagcccc ttcgccacgc
    18961 accgcagtga aaagctcgtt acggatagga tcgtaaacta cccctactgt tgtacgtccg
    19021 ttttcacgca cggcaatcga cacagcaaaa tgaggtaagc gttttacgaa attggttgta
    19081 ccatctaatg gatcgatcac ccattgtaca ttttcattgc taccgtttaa cacgccggac
    19141 tcttcggtca cgatcgagtg ttcagggtaa gatttacgga tcacatcaat aattgccgct
    19201 tccgctgctt tatcgatttc agtcacataa tcattcgtat ttttttgtaa aacttgtgta
    19261 tcttgaggcg attgttcata gcctttggca ataatattgc ctgcttttcg tgccgcacga
    19321 atagcaatgt ttaacattgg gttcatattt ccaccagatt ttaaagaaca taataaagca
    19381 cgaattataa agaatgtagc gaaataaaga aacaacaagc ggtctaatct gtgaaaaatt
    19441 ttgcaaaaaa atggcttttt ctaaccgctt ggagtttgga ttcgttataa tacctcccat
    19501 tcaagccacc catttaggta ctaaaaatgc aatttaaaga aaataaccaa cctcgtttta
    19561 aacacagaga agaacgccgt tcagatgagt gttccccccg tttttcagat aaaggcaaaa
    19621 tgcgaggaaa tgaaggtaaa agtgacagac cgcataagct acattttaag cgtgacgagg
    19681 cttattcacg ctctgagcag atttatccag cagaaggcaa aaaagccagt ggtgaaggta
    19741 gtgtgcaaat ttgggtaaaa ggtgggaata gctcagttaa agagaaaaaa aacggcccgc
    19801 tttcaccgag agcgcctgag aaaattaaga aaaatcgctt ggaagagatg aaagtctatg
    19861 gcgaaaatgc ctgtatcagt ttgttccaac aacgtcctga atctattgta cgtttatggg
    19921 caacagtgga gggggcaaaa aaattaggcg atttaatgag ctatttggct cagcacaaaa
    19981 aagcctatca cgttattgac cgtgaagaga tggagcgagt caccggtact gaacatcacg
    20041 gcgatatgtg cttattggtg aaaaaaacgg cttcatttgt gctagagggc tatttacaag
    20101 tgccgaaaaa acaagattgc ttggtactgt tagatggtgt aaacaatgct cagaatgtgg
    20161 ggggaatcat cagaacgtgt gctttttatg gtgtgaaagg cattattact gaaaatgtgg
    20221 atagcttaaa ctccagtgct gcagctcgtg tcgcagaggg tggtttggaa tttgtgcgag
    20281 cgttagaaac taaaaacaag catattgctt tggtacaact ccgccaagcc ggttatcaaa
    20341 ttgtccacct cacacgccat aagcaagccc cttctttaac caaaattaag ctggcggaaa
    20401 aggtggtttt tgtattaagt gagattcctg caagtgatgt ggcttacgca gaagacacaa
    20461 caatacagct ttcctttaat aatccgttaa atagtggttt aaatgtggcg gtaaacgcag
    20521 gtattctact taatcaatgg tatcaaaccc acattcttta aggaattgaa atgaatcagc
    20581 aaaaaccgtt tgaagtgatt gcgattgttg gcacacctcg ccacgacagt gcatttgaaa
    20641 cacatcttgc cgtttataat tggttaaaag atcgtgatta tcaaatttta gtggaaacag
    20701 aggttgccac tcagttacag cttaaggaaa gctacagttt agatcagatt gggcagcgcg
    20761 cagagttggt gattgtgata ggtggcgatg gtaatatgct tggcatcgcc cgagctttgg
    20821 ctaaataccg agtgccactg ataggcatta accgtggcaa tctgggtttt ttaaccgata
    20881 tcgcacctca aacggctttt gaacagcttt atagttgctt agtcaaaaat gagtatgtga
    20941 ttgaagagcg attcctgtta gaggctttca ttgagcgcaa cggtaaaatt attgccgcaa
    21001 ataatgcctt gaatgaaatt gtggttcacc caacccaagt ggctcgaatt attgaatttg
    21061 aagtttatat tgacggaaaa ttcgcttttt cacaacgtgc agatggcttg attgtggcaa
    21121 cgcctacagg ctcaaccgcc tattcacttt ctgctggtgg cccgatttta accccgaata
    21181 tgaatgcaat ggcattagtg ccgatgcacc ctcacactct ttcttctcgt cctttggtgg
    21241 ttgatggcga tagtcaaatt tcgcttcgtt ttgccaaata taatacccct gatttagaag
    21301 tgatttgtga cgggcaggtg aatatgcact ttacgcctga agatagagtc ttggtgcgta
    21361 aaagcccgga taaattacag ctgctccatt taaaagatta tagctacttt actgtattag
    21421 gttctaaatt aggctgggca agtaagttgt tttaaacaca agcggtgttt tttctgatta
    21481 aatttgcaaa tgcaatatga attgatttca tatacatttc aaaaatatat catttttatt
    21541 caataaaaat ttgtggttca ataagctatc tgaaaaataa aggggacaat aaaatgacaa
    21601 caaattttaa atgccaagtg catactattg aatttaatga agattaccaa ccggagcaaa
    21661 gcacccgttt aaccaccaac tttgccaacc ttgcccgtgg cgaaaaccgc aaacagaacc
    21721 tgcaaaatgc gattgcgatg atcaataacc gttttaacga tttagcgaac tgggataacc
    21781 cgaatgcgga tcgttattcg gtgaaattgg atattgtctc actggatatt gatgtggaag
    21841 gcaaaggcga gtttttccct gcgattgagt ggctgaaaac ctatgttatc gactacaaaa
    21901 ccggcaaaac cattgatggc attatcggta ataacttctc ttcttttgtg cgtgattacg
    21961 atttcagcgt attgttgtta gatcacaata aagacaaacc gcaatttagc gtgccggaag
    22021 gctatggcga gttacacggc aagctgttta agcatttatt ggcatcgcct gaatataccg
    22081 caaaatataa aaaaccaccg gtgatctgtt taagcgtggc aaccacccgt acctacacaa
    22141 gaaccactaa cgttcaccca attttaggtg tggaatatct gcaagatagt tattcattaa
    22201 ctgatgccta ttttgcgaaa atgggcttaa aagtacgtta ctttatgccg ccaaaatccg
    22261 ttgcacccta tgcgttctac tttgatgaga atgcagattt actcaatgat tacactaact
    22321 tagagctaat cagcacgatt gccacaatgg aagcgttcca aaaaatttac cgtccggaaa
    22381 tttacaatgc caattcggtc gcagggcagg tctataaagg cagcctgact taccaagatt
    22441 attccgtcac caaagtggaa tatgaccgtg aagaacgcac ccagttggcg atcaaacagg
    22501 gtaaatacac cgaagagcat tttattaaac gttaccaagc gattttagag gcttgggcga
    22561 cggaggaata aacgtagggt gggcgtaagc ccaccataaa atgagatata accaatggtg
    22621 ggcttacgcc caccctactt tttataggaa aattcaaaat gagcaacatt cttctcccaa
    22681 cctctaccgc cggcagccta ccaaaacctt cgtggcttgc cgagccggaa aaactgtggt
    22741 caccttggaa atttgaaggc gaggaactac ttcaagccaa acgtgatgcc ctccttgttt
    22801 cccttgccga acaaattgcg gcagggattg atattgttag tgatggcgaa cagacccgcc
    22861 agcactttgt gaccaccttt atcgagcatt tggaaggggt ggattttagc aagcgtgaaa
    22921 tcgtgcgcat tcgtaaccgt tacgatgcca gcgtgccgag cgtggtgggg gcagtttccc
    22981 gcccgaaatc ggtgtttgtg gacgatgcca aattcttgcg tgcgcatacc gacaaaccaa
    23041 tcaaatgggc attacccggc ccgatgacaa tgatcgacac tctctatgac ggtcattaca
    23101 aaagccgtga aaaattggcg tgggaatttg ccaaaattct caacgaagaa gccaaagagt
    23161 tggaagcggc aggggtggat attattcaat ttgacgaacc ggcatttaac gtcttcttcg
    23221 atgagctgaa cgactggggc gtggcggcgt tagagcgtgc ggcggaaggc ttaaaatgcg
    23281 aaacggcggt gcatatctgc tacggctacg gcattaaagc caataccgac tggaaacaga
    23341 ccctcggcaa cgaatggcgt caatacgaag agagtttccc gaaactgcaa caatcaaaaa
    23401 tcgacattat ctcgttagag tgccaaaact cccgtgtgcc aatggactta atcgaattag
    23461 tgcgtggcaa aaaagtaatg ctgggagcga ttgatgtggc taccaacatt atcgaaacac
    23521 cggaacaagt ggcagatacg ttacgcaaag cattacaatt tgtcgatgcg gataaacttt
    23581 atccaagcac caactgcgga atggcaccac tttcacgcca agtcgcacaa ggtaaattac
    23641 aggcactcag ccaaggggca gcgatattgc gtgcggaatt cgcaaaataa ttttgcgatc
    23701 tgcatcgaaa atatcaactt tgctttttgc tcgtttccag attttcttcc aaaataacag
    23761 gaaatgacgg aggcactatg ctaaatctat ttaaaaagcc aattaagaaa agctcctttg
    23821 aggcttgggc aaaactaatg gacgatgtgg caaaagttgc aattttagca attcctgtta
    23881 ttctctatgg agaatattca ctgctaatga aatttacaca ctcaattacc ttatttgcag
    23941 tagtttattt tttgttagca acggcaagat tgtttcgaga aacagcagag gagatgtaaa
    24001 tggacggatt gacaatcgga ttatttcttt tgcttgcatt ttcatttgct gcataccaat
    24061 gggcaaagca tttaaaagat cataat
//
LOCUS       DANLTI010000025        23809 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.025, whole genome shotgun sequence.
ACCESSION   DANLTI010000025 DANLTI010000000
VERSION     DANLTI010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23809
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.025"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(158..469)
                     /locus_tag="PXB09_000783"
     CDS             complement(158..469)
                     /locus_tag="PXB09_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5232923.1"
                     /translation="MSETEKQAINAPNAVMNGYLTMHYPDWFKPDGIYFNDGAFESFE
                     SSHKLTKDGKIRLVPTAGHTLGHLAVVVDMGEHYILIGGDASYSEQDMLAGNIDGVCN
                     A"
     gene            complement(476..868)
                     /locus_tag="PXB09_000784"
     CDS             complement(476..868)
                     /locus_tag="PXB09_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5232924.1"
                     /translation="MIKVHCLTTGWVQIKIHHQVARFFARPARVLDVLTDKKWSPKLP
                     IGCWLIEHDDGLILVDTGESSRANDKGYQPWWHPFMQFCERRGVKKHEEVGEILKANG
                     FDPLRIDTVVMTHMHGDHAGGLPNFPNS"
     gene            1000..1560
                     /locus_tag="PXB09_000785"
     CDS             1000..1560
                     /locus_tag="PXB09_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDL5232925.1"
                     /translation="MNDLRVIKTHLAIQNALIELLDEKLFEKVQVQEIIEKALINRTT
                     FYRYYSGESDLVGKLIKEVKAEYQDLLKKRFESGNLLRFMQTIGNRLLEKRRLILALW
                     QIKTPRHHLYDDMHMLLKNAFIAHAKRITSDDKNWAEKNWDYQAHIFATIALESHKYY
                     FEQGKLLPIPQVFEEWIEMVQVLKSV"
     gene            complement(1626..2615)
                     /locus_tag="PXB09_000786"
     CDS             complement(1626..2615)
                     /locus_tag="PXB09_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDL5232926.1"
                     /translation="MSKQIQFTKTGSPDVLQIVDVAIPAPKAHEVQIQIQAIGLNRAE
                     MMYREGAYVIDPVFPATLGYEGAGVIVAIGEGVNEVAISDKVSIIPSFMFTEYGTYGE
                     IVNMPKHAVVKHPDNLSMEQASASWMAFVTAYGGLIEFGKVQKGDFVVLGGATSSVGL
                     ASIQIAKMQGATVIALSRTHAKGDVLLEKGADFVIATSEDDVTAKLFEITNGKGVNVV
                     FDPVGRKEAAKIINAMAQDGRYIIYGALSHDDIAVPVFPILGKHLTVRGYELFEITTV
                     PEKLAQAKTFVYDGLASGQLRPEIDKIFAFDEMVKAHEYMASNQQIGKIVVKV"
     gene            complement(2829..3746)
                     /locus_tag="PXB09_000787"
     CDS             complement(2829..3746)
                     /locus_tag="PXB09_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5232927.1"
                     /translation="MTFIIGILAGVLIAFQSAINARLRMHVGAAFLTSFVSFSVGLLF
                     LLGLSLIMQQTPAFSLDNLGNVPLWAWTGGLLGMVGLTANVLIFPKLGGVQTAVMPIL
                     GQVLMGVLIDTFAWLNSPYIAFTASRLFGIGLVLFGVWIAVVLPHLSGLKRKENANLW
                     LWRAVGILGGTALATQAAVNGEFGRQPGSSLGAATVSFGVGAIGLLLVVLFYEKSLPK
                     LCQPTEGKPFWIWSGGILGSLFILAGVWLVPQIGTGSVVMLVLSGLICGSLLVDKFGL
                     FGITQKPILPLQIIGVTLLLAGVAFIRLL"
     gene            complement(3882..4541)
                     /locus_tag="PXB09_000788"
     CDS             complement(3882..4541)
                     /locus_tag="PXB09_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5232928.1"
                     /translation="MQFFNKEDVINAFHYRASTRSYDGSRKIPAEDFNYILELGRLSP
                     SSVGSEPWQFLVLQNPELRQKIKPYCWGIPTMETSSHIVVILAKKNARYDSQYFSEIM
                     DRRGLQGEAREKAMAVYKKFQEKDIGILDSERSLFDWASKQTYIALGNMMTGAALIGV
                     DSCPIEGFAYQEVNDILAAEGLFDPSEWGVSVMCTFGYRDKEIRQKARKDFETVVKFI
                     E"
     gene            complement(4726..5790)
                     /locus_tag="PXB09_000789"
     CDS             complement(4726..5790)
                     /locus_tag="PXB09_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDL5232929.1"
                     /translation="MAKFRKLFTPFNIKNLALKNRVVMPPMCQYSATNGVPNDWHFVH
                     YTSRAVGGVGLIIVEMTNVAPNGRITPNCLGLWNDEQQQAFKKLVDSVHAQGAKIGVQ
                     IAHAGRKAQDEPDAVAPSAIHYGELDYAGQNLITPRELTTDEVKALVQAFKDSVKRAV
                     EAGFDTIEIHGAHGYLIHQFYSPKSNQRSDEYGQDKMLFGEQVIQAAREVMPSEMPLI
                     VRISAQEYGENGFGLDYGLQVAKRFADAGADVLDISGGGDGVLHAGNHPEFYAGYQVD
                     FARQVKLATGKPVIAVGMLDNPAVGDHILGMGDADLVAVGRALLRDPYWVLNAQYDQN
                     AADSSEMQFVPKQYERGLFM"
     gene            5881..6789
                     /locus_tag="PXB09_000790"
     CDS             5881..6789
                     /locus_tag="PXB09_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5232930.1"
                     /translation="MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNR
                     LRESFNDPLFVRVQHGMQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIA
                     AMDYVQQIIALPLILRLRRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTD
                     TLKTVLYEERYVCAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIG
                     LQRKVMVSVNHISLLPQLLQGSDLVAVLPERLAKTLPNVYLQPPPIEVEGFTMMMAWH
                     ERTEQDTAHRWLREVLQGVVKPKQAL"
     gene            complement(6859..7410)
                     /locus_tag="PXB09_000791"
     CDS             complement(6859..7410)
                     /locus_tag="PXB09_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5232931.1"
                     /translation="MAKQIAVLIGSGSKTSFSHLTVRHLQKMAPASIQLNIVDIADLP
                     LYDRDLDENSPAQYTRVREAVAVADGVLLVTPEHNASFSAMLKNAIDVVSRPMGQSKW
                     IGKPAGIVTVGASPAGGVRAADQVRTITSGSFVNMPTLPFALNVGNLFTGVFDEQGEI
                     ASETLKSSMQNFINAYAQFVEKY"
     gene            7602..8963
                     /locus_tag="PXB09_000792"
     CDS             7602..8963
                     /locus_tag="PXB09_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDL5232932.1"
                     /translation="MLFLNKIKQLFIFAFTLVLSACSLVVYKPVETIKQVNVERGYRQ
                     KNVIAESAKDGNIVVIMFSGGGTRAAALGYGVLEEFKKVRVKETNKGNTLLENIDIAF
                     GVSGGSILATYFALEGKDIIPKFADRFLKANFQKDIITEVFSLSNLPRLSSPQYGRGD
                     LLQERLNFALYHGKKFGDLVKNRKGPFAVISATDMNIGQKLTFTQETFDGLCLNLNDL
                     EISRAVAASSSVPLIFAPLTLNNNGGNCHFSMPQEFSAREKAIDGLITKNIEETNHIL
                     SLYQDSKERPFIHLVDGGLTDNLGLASVLEISDVMGIEEMYQYIHQLRVKNIVVINVN
                     AQNEVSSEIDKTANVPGVADVVNTIVNVPIDRTTQINLQRYRQFTDGWNEYANKQPSK
                     IEMHFVSLGLKELPDGDLKKDVLNIATSFYLPEEDVDKLREAARVLLQQSQEYNAALK
                     TLQ"
     gene            complement(9011..9508)
                     /gene="rraA"
                     /locus_tag="PXB09_000793"
     CDS             complement(9011..9508)
                     /gene="rraA"
                     /locus_tag="PXB09_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDL5232933.1"
                     /translation="MRIDTSALCDLYSDQVDVVEPIFSSFGGASSFFGKITTVKCFES
                     NGLIAEVLEEEGEGRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDIL
                     ERLDIGIHALAPIPVGADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL
                     NDISE"
     gene            complement(9606..10508)
                     /locus_tag="PXB09_000794"
     CDS             complement(9606..10508)
                     /locus_tag="PXB09_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDL5232934.1"
                     /translation="MTEKVTETAPNIDVVAETEKVIHKVSNMNIETMLNEWIIPYGTK
                     ILLAIAIFVVGKFLARLISRLLGKAALKSTKDEMLQSFIVSISYFLLLLIVVIASLSQ
                     IGINTSSLVALIGAAGLAIGLSLQNSLQNFAAGVMLLIFKPFRKGDLIETGGMTGVVE
                     QMGLLVLELRTGDNKTVLLPNGKVFSDSIINYSNNPTRRIDFTFDISYESNLKEAKEI
                     IQRILDANTYVLKDPAPVVAVGALAPHSVQLVVRPWVQTPNYWAAYWEIIEQVKLAFG
                     EAGISIPYNQMELHIKSGSLENKA"
     gene            10617..11579
                     /gene="rluC"
                     /locus_tag="PXB09_000795"
     CDS             10617..11579
                     /gene="rluC"
                     /locus_tag="PXB09_000795"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDL5232935.1"
                     /translation="MTTEKVISAGVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRI
                     VRKGEVRVNKGRNKPEYKLQPDDLVRVPPVRVAEKNEAPISTKLNKVAELESQILYED
                     ESMLVINKPSGIAVHGGSGLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKR
                     SALRSLHEQLREKVVQKDYLALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKP
                     SETRFSIEERYANATLVKASPITGRTHQIRVHTQYAGHPIALDDKYGDAEFDSKMKEV
                     GLQRLFLHAHAIRFEHPKTGEEMVITAPLDKTLKGVLAKLRANY"
     gene            11688..12546
                     /gene="folP"
                     /locus_tag="PXB09_000796"
                     /pseudo
     CDS             11688..12546
                     /gene="folP"
                     /locus_tag="PXB09_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248541.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
     gene            12546..12893
                     /locus_tag="PXB09_000797"
     CDS             12546..12893
                     /locus_tag="PXB09_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDL5232936.1"
                     /translation="MTTLVYGIKNCDTVKKALKWLEDHNQNPQLHDYRVDGLNADWLV
                     EMEAKFGWENLVNKRSTTWRNLDEEIKNNLNRESALKVLTEQPTLIKRPIVIKEDIAL
                     IGFNEKEYVAAFN"
     gene            13023..14171
                     /gene="dapE"
                     /locus_tag="PXB09_000798"
     CDS             13023..14171
                     /gene="dapE"
                     /locus_tag="PXB09_000798"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDL5232937.1"
                     /translation="MKNEIISLAQNLIRRDSISPQDKGCQQEIAQRLEKLGFNIEWLP
                     FGDTLNLWATHGSENGKTEPCIVFAGHTDVVPVGDESQWAYPPFSAEIVDGMLYGRGA
                     ADMKGSLSALVVAAETFVQHHPNHKGKVALLITSDEEAAAKDGTVKVVETLMARNEAV
                     HYAVVGEPSSSKVFGDVIKNGRRGSITADLYIEGIQGHVAYPHLAENPVHTSLGFLTE
                     LTTYQWDNGNEFFPPTSLQIANIKAGTGSNNVIPGELYVQFNLRYCTEVTDEIIKAKV
                     AEMLEKHGLKYRISWNLSGKPFLAGNGKLVEAALQAVENVTKITPRLDTGGGTSDGRF
                     IALMGAEVVEFGPLNATIHKVNECVSADDLAHCGEIYYQILEKLLATA"
     gene            14282..15616
                     /locus_tag="PXB09_000799"
     CDS             14282..15616
                     /locus_tag="PXB09_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDL5232938.1"
                     /translation="MQLYSYICLLFGLAMFISFFTRKLNENIQTTIAITASALVGSLL
                     ILTFGSLGWFNVDKLAISIFEQLDFKSFLLNGMLGFLLFAGSLGIKLPLMKEQRREIA
                     VYALFSTLVSTFLIGALIYGVARLLGLELGFVYCLLFGSLISPTDPIAVLAIIKSLKA
                     PKRLSMHVEGESLFNDGIGLVIFTTIFAVAFGGQEPNLSGITGLFLQEAVGGIVFGLL
                     TGFVAHKFISATDDGSLEILITLTIPTVGFVIANYLHVSGALTMVVAGIMIGNWTRRS
                     GFSEQSQKYLDHFWEMIDHSLNYLLFLLIGLSTLLVDFTFIGGVLMLAAIPICLLARY
                     ISLWIPYQVLKRFRTYNPYTLKIMTWGGLRGGLALAMALSVPAGAAVVSSSEGNLDVR
                     DLILLMTYAVVTFSILVQGSTVEPMIKKSKLVDPRKVALNKLGAPDDVIPHI"
     gene            15723..16232
                     /locus_tag="PXB09_000800"
     CDS             15723..16232
                     /locus_tag="PXB09_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDL5232939.1"
                     /translation="MLFTGLLCGFLLGFVMQRGRFCITGAFRDLYVTKNSRMFVALLI
                     AITVQSIGIWLLYEAGSFSSPAEDLPLLAVIIGAFLFGIGIIYAGGCATGTWYRAGEG
                     LIGSWVALVIYGLFSASMRTGVLAPLNQELKSNVIQHRTIYETFGISPWVLVFILSVI
                     TLALSAHSI"
     gene            16261..16482
                     /locus_tag="PXB09_000801"
     CDS             16261..16482
                     /locus_tag="PXB09_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5232940.1"
                     /translation="MNVRLPASGLVCPFPLVEAKAAMAKLNKGDSLTIEFDCTQATEA
                     IPNWAEEEGYEVTDYQQLGDALWEITVVK"
     gene            complement(16547..18055)
                     /locus_tag="PXB09_000802"
     CDS             complement(16547..18055)
                     /locus_tag="PXB09_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDL5232941.1"
                     /translation="MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLA
                     NFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAAIFSQVGKKTEMFARFTTVAGER
                     GAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS
                     ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHF
                     HTQQGIKNLTNEEAAAIIANDRESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPY
                     HPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGISVSPDRMLQ
                     ARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGK
                     WQEQAQYAEPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMG
                     DALDFIKYRHIRNCYACDPAYGEGVAKALGMTVEDAIAARATDPALGQPGLL"
     gene            complement(18343..19482)
                     /gene="dnaJ"
                     /locus_tag="PXB09_000803"
     CDS             complement(18343..19482)
                     /gene="dnaJ"
                     /locus_tag="PXB09_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDL5232942.1"
                     /translation="MAKKDYYEVLGLSKGASEKDIKRAYKRLAAKHHPDKNQGSKESE
                     EKFKEITEAYDVLTDSEKKAMYDQYGHAAFEQGGAGAGGFGGFGGGGFGGFEDIFSEM
                     FGGGFGGGGRRQRVVRGDDLRYDIEITLEEAVKGCKKDIRIQTLAECDTCHGTGAEAG
                     SKVETCSHCHGSGRVRRQQGFFVTEAVCPSCHGTGKRIEKPCRSCHGDGRVQKAKNLS
                     VTIPAGVDTGNQLRLSREGAAGENGAPAGDLYVVIHVKEHDIFERDGSNLYCEVPISF
                     TLAALGGEIEVPTLDGKLKLKIPAETQTGKLFRVRGKGVTSPRGGYAGDLICKVVVET
                     PVNLTEEQKALLRQFEESLEGQGKHRPKHEGFFDGVKKFFDNLGK"
     gene            complement(19705..20007)
                     /locus_tag="PXB09_000804"
     CDS             complement(19705..20007)
                     /locus_tag="PXB09_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232943.1"
                     /translation="MLKLYPTTENVQPPFYKIYDHKSGETVIATETENSNTAILMDDF
                     VWFEQIPTTEALLADTWSVIENRSKQGLLKRAYTKDFEKHLADGKVEIYIAVNPHC"
     gene            complement(20149..22047)
                     /gene="dnaK"
                     /locus_tag="PXB09_000805"
     CDS             complement(20149..22047)
                     /gene="dnaK"
                     /locus_tag="PXB09_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDL5232944.1"
                     /translation="MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD
                     KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWV
                     TVKGDKLAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIA
                     GLDVKRIINEPTAAALAYGLDSKKENQTIAVYDLGGGTFDISIIEIDNFDGEQTFEVR
                     ATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQ
                     ETEVNLPYITADATGPKHLNIKVTRAKLESLVEDLVNRSLEPLKTALADAGLSVGDIN
                     DVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGSVTDVLLLD
                     VTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADN
                     KSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSGLSD
                     AEVEQMVRDAEANAEADKKFEELVQARNQADGIAHATRKQITEAGDALNADDKAKIEA
                     AISELETAAKGEDKAEIEAKIEALIKASEPLMQAAQAKAQGGEQPQQSQKDDGVVDAE
                     FEEVKDNK"
     gene            22306..22644
                     /locus_tag="PXB09_000806"
     CDS             22306..22644
                     /locus_tag="PXB09_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5232945.1"
                     /translation="MKLITTIIQPSKLDQVQDALSEIGIQGMTITEVKGFGRQYGHTE
                     QELSQMSRIDFRPKIKVEILVSNYQTDEVIDAILNASYSGQVGDGKIYVANIEQVIRT
                     RTGETDDEAV"
     gene            22815..23558
                     /locus_tag="PXB09_000807"
     CDS             22815..23558
                     /locus_tag="PXB09_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232946.1"
                     /translation="MLNKHINKIINSSFSLAFFTLTSFATAYCYGWGQAIFHGYPWWH
                     VEIGNASMARSLAYVFGTSVILFLCYALGYSLLNKVFQLHYFRNLGWLRVIVLVSVFT
                     VPVILTFYLFTGIVPIYISFIYIFVSGVSVFFFRKRWNNTKFDLDFRKMLLGGSFALF
                     NIFIFLYFSLLSLHIGYLRAGLRTTYDYIEIENQKYYILSTNSDNGYIMGTKIRGNQS
                     FLFFNRDTHQYYHVHIEQCTDSRLCKVIV"
     gene            23566..23796
                     /locus_tag="PXB09_000808"
     CDS             23566..23796
                     /locus_tag="PXB09_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232947.1"
                     /translation="MALHRCPECRKRISDSLEHCIHCGFSFKEADLAIYRQKLEQRRL
                     HNQEINRKSVKLQLIWLVIFIAVIALASWITN"
BASE COUNT         6632 a         5016 c         5093 g         7068 t
ORIGIN      
        1 aagtttgaaa tatttttaat aaaaatgacc gcttgccttt caacaagcgg tcattcccct
       61 ttaatttttt accaccgtaa acaccttatt tttcagccga tattcacttt tttcatcgtg
      121 agccagttgc acaatggttg gcttgcgttt acacaattca cgcattgcac acgccgtcaa
      181 tgttgccagc aagcatatct tgttcagagt aagaggcatc gccgccaatc aaaatataat
      241 gctcgcccat atccaccacc accgccaaat gccccagcgt atgtcctgcg gttggcacaa
      301 ggcggatttt gccgtctttg gtgagtttat gactgctctc aaaactttca aacgccccat
      361 cattaaaata gatgccatca ggcttaaacc aatcaggata gtgcattgtt aaataaccgt
      421 tcatcaccgc attgggggcg ttgattgcct gtttttcagt ctcactcatc acaaatcagc
      481 tgtttgggaa attgggcaat ccgcctgcgt ggtcgccgtg catatgggtc attaccaccg
      541 tgtcaatgcg taaagggtca aagccgtttg cctttaaaat ttcgcccact tcttcgtgtt
      601 ttttgacccc acgccgttcg caaaactgca taaacgggtg ccaccacggc tgatagccct
      661 tgtcgttggc acgactgctt tcgcccgtat ccaccaaaat caaaccgtca tcgtgttcaa
      721 tcagccagca accaatcggc agtttaggcg accatttttt atcggtcagc acatcaagca
      781 cacgggcagg acgggcaaaa aagcgtgcca cttgatgatg aattttgatt tgtacccaac
      841 ctgttgtcag acaatgcact ttaatcattt ttgtgttctc attaaaaaat cgtgggcata
      901 ttgtagaaag tgcggtaact tttcacaaac attaaaaagt tcgtatttgg ctggatatgc
      961 agataaaatt acaaaaatgt atgcttattt tgaaaaaaga tgaacgattt aagagtaatc
     1021 aaaacccatc tagcaatcca aaacgctttg attgaattat tagatgaaaa gctgtttgaa
     1081 aaagtgcaag tccaagaaat cattgaaaaa gccttgatta accgcaccac tttttaccgt
     1141 tattattcgg gcgaaagtga tttggtcggc aaattgataa aagaggtgaa ggcggaatat
     1201 caagacctgc tcaaaaagcg ttttgaaagc ggtaatttgc tgcgatttat gcaaaccatt
     1261 ggcaaccgct tattggaaaa aagacggctg attttggcac tttggcaaat caaaacccct
     1321 cgccatcatt tgtatgacga tatgcacatg ctgttaaaaa acgcctttat cgcccacgcc
     1381 aaacggataa catcagatga taaaaactgg gctgagaaaa attgggatta ccaagcccat
     1441 atttttgcca ccattgccct tgaaagccat aaatattatt ttgaacaagg caaacttttg
     1501 cccattccac aggtgtttga ggagtggata gaaatggtgc aggtgttgaa aagtgtttag
     1561 aaataactgg taaaattttc cataaaaaac accgctttca tcacaaaagc ggtgctttca
     1621 aatcatcaaa ccttaaccac aatcttacca atctgctgat tgcttgccat atattcgtga
     1681 gctttaacca tttcatcaaa ggcaaagatt ttgtcaattt cagggcgtaa ctgaccgctt
     1741 gccaaaccgt catagacaaa ggttttggct tgtgccaatt tttcaggtac ggtggtaatt
     1801 tcaaagagtt catacccccg cacggtcaaa tgcttaccca aaatcgggaa cactggcaca
     1861 gcaatatcat catggcttaa cgctccataa atgatgtaac gaccatcttg tgccattgca
     1921 ttgatgattt ttgccgcctc ttttctgccc acagggtcaa ataccacatt gacgcctttg
     1981 ccattggtga tttcaaaaag tttggcggtt acatcgtctt cgcttgtggc aatcacaaaa
     2041 tccgctcctt tttccaaaag tacatcgcct ttggcgtggg tgcgagacaa ggcaatcacg
     2101 gttgcccctt gcattttggc gatttggata ctggctaaac caaccgaact ggttgcaccg
     2161 cccagcacca caaaatcgcc tttttgtact ttgccaaact caatcagtcc gccataagcg
     2221 gtaacaaacg ccatccaact ggcggacgct tgttccattg acaaattatc agggtgcttg
     2281 accacagcgt gttttggcat attgacgatt tcgccataag tgccgtattc ggtaaacata
     2341 aaggacggaa taatgctcac cttatcgcta atggcaactt cgttcacacc ctcgccaatc
     2401 gccacaatca caccagcccc ttcataaccc aaagtcgcag ggaatacagg gtcaatcaca
     2461 tacgcccctt cacggtacat catttcggca cggtttaagc caatggcttg gatttggatt
     2521 tgtacttcgt gtgcttttgg tgcaggaatt gctacatcaa cgatttgcaa gacatcaggc
     2581 gaacctgttt ttgtaaattg gatttgtttg ctcattgttt tgaccttttg tgtaaataat
     2641 gggcgtattt taatgcaatg aatttatttt aaacacaaca tcaattgcaa aacacttttg
     2701 ctaaatttac ataaatacat tttcacaatg tctgaaaagt tgttttgcaa attttaaaaa
     2761 gaaaaccacc gcttgccgat cacaagcggt ggtttttgtg ggttattttg caagaggtgt
     2821 cagcttggct acagtaagcg gataaatgcg acgccggcta agagtaaggt aacgccgatg
     2881 atctgcagcg gtagaatggg tttttgtgta atgccgaaca gaccgaattt atctaccagc
     2941 aggctgccgc aaatcaggcc agagaggacg agcatcacca ccgagcctgt gccgatttgg
     3001 gggacgagcc aaacgccagc gaggataaac aggctgccca gtatgccgcc gctccatatc
     3061 caaaacggtt tgccttcggt tggctggcag agtttcggca ggcttttttc ataaaacagc
     3121 actaccagta ataagccgat ggcaccgaca ccgaaggaga ctgttgctgc gccgagtgat
     3181 gagccgggct gtctgccgaa ttcgccatta acggcggctt gggttgctaa tgcggttccg
     3241 cctaatatgc cgactgcgcg ccacagccat aaatttgcgt tttctttgcg ttttagaccg
     3301 gacagatggg gcagtaccac ggcaatccat acgccgaata agactaaacc aatgccaaac
     3361 aggcggctgg ccgtgaaggc tatgtaaggc gagttaagcc aagcgaaagt gtcgatcagc
     3421 acgcccatca gcacttggcc taaaatcggc atgaccgcag tttgtacgcc gccgagcttg
     3481 gggaagatca gtacgtttgc cgttagcccc accatgccga gtaatccgcc cgtccatgcc
     3541 cataagggga cgttgcctaa attgtcgagg ctaaatgctg gtgtttgttg catgatgagc
     3601 gagagtccga gtagaaacag gaggcctacg ctgaaagaga caaacgaggt taaaaatgcc
     3661 gcacccacgt gcatacgcaa acgggcgttg atggctgatt gaaatgcaat cagcacgccg
     3721 gctaaaatac cgataataaa tgtcatgact aactgggttg tgctgccgcc tcaaaatgag
     3781 tggtggttga aaagaaatgc cgtctgaatg cggattcaga cggccttaag gcttggtatc
     3841 ggcgtttacc tgatgttgaa tagccgtttt gcctagccgg tttattcgat gaatttcacc
     3901 acggtttcga aatctttacg tgctttttgg cggatttctt tatcacggta accgaaggta
     3961 cacatcaccg atacgcccca ttcgcttggg tcaaataatc cttccgctgc caaaatatcg
     4021 ttgacttctt ggtaagcgaa accttctatc ggacaagaat ctacgccaat taaagctgca
     4081 ccggtcatca tattgcccaa tgcgatgtag gtttgtttgc ttgcccagtc aaacaggctg
     4141 cgttcgctgt ctaaaatgcc gatatctttc tcttggaatt ttttatacac ggccatggct
     4201 ttttcgcgcg cttcgccttg taaacctcgt ctatccataa tttcagaaaa atattggctg
     4261 tcgtaacggg catttttctt cgctaaaatc accacgatat ggcttgaggt ttccatagtt
     4321 ggaatgcccc agcagtaagg tttgattttt tgccgtaatt cagggttttg caacactaaa
     4381 aactgccaag gctctgagcc taccgaactt ggacttaaac gaccgagttc cagaatatag
     4441 ttgaaatctt cagccggaat ttttctgctg ccgtcgtaag aacgggtaga tgcacggtaa
     4501 tgaaaggcat tgattacgtc ttctttgttg aaaaattgca tggaacactc ctaaaaatgc
     4561 aaaacagtct tttcagacgg tctgaaaagt ctagatgaaa tacggataag tataaaagat
     4621 ttaagttatt tttaataatt gataattttg atatttaggt ataagttgac gtgatgagaa
     4681 aaaacagacc ctctgaatgt tcaggcggtc tttaacgttg gttgtttaca taaataatcc
     4741 gcgttcatat tgcttcggta caaactgcat ttcactgctg tctgctgcat tttggtcata
     4801 ttgcgcattc aatacccagt acggatcgcg caataaggct cttcccacag ccactaaatc
     4861 cgcatcgccc atacctaaga tatgatcgcc taccgccgga ttatccaaca tacctactgc
     4921 aattaccggt ttgcccgtag cgagcttcac ttgacgggca aagtctactt ggtaacctgc
     4981 gtaaaattcg gggtgattac ctgcatgcaa tacaccatca ccaccaccgc tgatgtctaa
     5041 gacatctgcg cctgcatcgg caaaacgttt cgctacctgc aaaccataat ccaagccaaa
     5101 gccgttttca ccgtattctt gtgcagaaat gcggacaatt aacggcattt cagacggcat
     5161 cacttcacgt gctgcctgaa tcacttgctc gccaaacaac attttgtctt ggccgtactc
     5221 atcactgcgc tgattggatt tcggcgaata gaattggtga attagataac cgtgtgcgcc
     5281 gtggatttca attgtatcaa agcctgcctc aacggcacgt ttgaccgaat ccttaaaggc
     5341 ttgaaccaat gctttgactt cgtctgtcgt cagctcgcga ggtgtaatca gattttgtcc
     5401 ggcataatcc aactcaccgt agtgaattgc acttggagcc actgcatccg gctcgtcttg
     5461 ggctttgcgt ccggcatggg cgatttgcac accgattttt gccccttgag catgaacgct
     5521 gtctaccagt tttttgaatg cctgttgttg ttcatcgttc cataagccta agcagtttgg
     5581 cgtaattctg ccgtttggcg ccacattggt catctccaca ataatcaagc cgacaccacc
     5641 tactgcacgg ctggtgtaat gcacgaaatg ccaatcgttc ggtacgccgt tggttgccga
     5701 atattgacac attggtggca taaccacacg gtttttcaat gctaagtttt taatgttaaa
     5761 cggggtgaat aattttctga acttcgccat gttgccttcc ttaatgaaat agattaggtg
     5821 gaatgataat tcagtgctat tatctattca aattgattat tgtgatagtt aggtataaaa
     5881 atgagtgata taagaacact ggatttcaat ttgctcaaag cttttgtggt gctgctggac
     5941 gaatgcaacg ttagccgggc agcacaacga ttatccatca cccaaccggc aatgagcggt
     6001 attttaaacc gcttgcgcga gagttttaac gatccgttat ttgtgcgagt gcaacacggt
     6061 atgcagccaa ccgaccgcgc gttgcaactg gggcaaaccg cacgcaacat tctgcaagat
     6121 atcagctcca tgctgcaacc acccatattg gaaccggaac atctgaatat gaccttgcgt
     6181 attgccgcaa tggattatgt acaacaaatt attgccttgc cgctgattct gcgtttaaga
     6241 cggcttgctc cgaatgtaaa agtcgcctta ctgccggtgc aggggcaaaa tatcaaaact
     6301 ttgttcgagc aaaaaaaaat cgatcttgcc ttggtcagcc gccaacattt aagcacggat
     6361 acgctgaaaa cggtattata tgaagaacgc tacgtatgcg cgatgagcaa aacacacccg
     6421 atggcgcaaa caccgctatc gctcgatcaa ttctgcaatc ttcccttcgc aatgctttct
     6481 tacaacggcg gagaattcag cggagctacg gatctagcgt tacaaaagat aggactacag
     6541 cgcaaagtaa tggtctcggt aaaccatatt tccctgctgc cccagctgct acaaggttcc
     6601 gacttagtcg cagtattgcc cgaacgctta gcaaaaacct tacccaatgt ttatttacaa
     6661 cctccgccta tagaggtaga aggcttcacc atgatgatgg cttggcacga aagaaccgaa
     6721 caagatacgg cgcatcgatg gttaagagag gtgctgcagg gtgtggtaaa acctaaacag
     6781 gctctttaat tattctttct tttgctatga aaaaagccgt ttatattttt agataaacgg
     6841 cttttttgca ttctaatatt agtatttttc tacaaactga gcataggcat taatgaagtt
     6901 ttgcattgag ctttttaatg tctcagaggc aatttcaccc tgttcatcaa atacgcctgt
     6961 aaataagttt cctacgttta atgcgaaagg taaggttggc atatttacaa atgagcctga
     7021 agtaatagta cgtacttgat cagctgcacg tacaccgcct gccgggcttg cgccaacggt
     7081 tacgatacct gccggtttgc caatccattt gctttgcccc attgggcgag aaaccacgtc
     7141 aatcgcattt ttaagcattg cagaaaagct tgcattatgc tcaggtgtga ctaataacac
     7201 gccatctgcc acagcaaccg cttcacgcac tctggtgtat tgtgccgggc tgttttcatc
     7261 taaatcacgg tcgtaaagtg gtaagtctgc aatatccaca atgtttaatt gaatgcttgc
     7321 aggtgccatt ttttgtaagt gacgaacagt caagtgacta aatgaagttt tgctgccgct
     7381 accaattaat actgcaattt gttttgccat tttataattc cttagtacat agagaatata
     7441 ggcattttat ccctttcaat ctgtttcata aagcgcttat gatgaaaagc actatttact
     7501 tatattaaat aattttgcaa attttaggcc aaatttgacc gcttttatct ttagctaaaa
     7561 aggttataat ttgtagaaat agatcttaat ttagggtttt tatgcttttt ctaaacaaaa
     7621 taaaacagct tttcatcttc gcctttacgc tagtgttatc tgcttgcagt ttggttgttt
     7681 ataagccagt tgaaacaatt aaacaggtaa atgttgaaag aggttatcga caaaaaaatg
     7741 tgatcgctga aagtgcaaaa gacggtaata ttgttgtcat catgttttca ggtggtggaa
     7801 caagagcggc ggcgcttggt tatggagtgt tggaagagtt taaaaaggta agggtgaaag
     7861 aaacaaataa aggtaatact ttattagaga atatagatat tgcctttggc gtatcaggtg
     7921 gatcgatatt agccacttat tttgcgttgg aaggaaagga tatcattcct aaatttgctg
     7981 accgtttttt aaaagcgaac tttcaaaaag atattattac agaggtgttt tcgttatcca
     8041 atcttcctcg tttaagttct cctcaatatg ggcgtggtga tttattgcaa gaacgcttaa
     8101 attttgccct ttatcatggt aaaaagtttg gtgatttagt gaaaaatcgt aaaggacctt
     8161 ttgctgtgat tagcgcaaca gacatgaaca ttggtcaaaa actgaccttt acgcaagaaa
     8221 cctttgatgg gctttgttta aatttgaatg atttagaaat ttcccgtgct gttgctgctt
     8281 ctagttctgt tcctctgatt tttgcgccgc ttacactgaa taacaatggt ggaaattgcc
     8341 attttagtat gccacaagaa tttagtgcta gagaaaaagc aattgatgga ctaattacaa
     8401 aaaatattga agaaacgaat catatactca gcctttatca agatagtaaa gaacgcccct
     8461 ttatccattt agttgatggt ggattaacag ataatttagg gcttgccagt gtgctggaaa
     8521 tatctgatgt tatgggtatt gaagagatgt accagtatat tcatcagctt agggtgaaaa
     8581 atattgtagt gattaatgta aatgcgcaaa atgaagtatc tagcgagatc gataagaccg
     8641 caaatgtacc gggggtggct gatgtagtga atacaatagt taatgtgcca attgatagaa
     8701 cgacacaaat taatttacaa cgttatcgcc agtttacaga tggttggaat gaatatgcaa
     8761 ataaacagcc atcaaagatc gaaatgcatt ttgtcagttt aggtttaaaa gaattacctg
     8821 atggtgattt aaaaaaagat gtgctaaata ttgcaacatc attttatttg ccggaagagg
     8881 atgtagataa attacgtgaa gctgctcggg ttttattgca gcaatctcaa gaatataatg
     8941 cggcattaaa aacactgcag tagtaaaaaa ccgaccaagc ggtcggtttt tggtattttt
     9001 ttgcaaatat ttattcgctg atgtcgttta aatccaacaa ctcttgcgaa agaataatgc
     9061 cggttaagtc agcataaacg taatcttcgg ggaagaaggt tacaccgcca aaattcacag
     9121 gcgtatccac ttcgccaatg tcggtattat ctgctcccac tggaattggc gctaaagcat
     9181 gaataccgat atctaatctt tccaaaatat ctaattggcg aaccgcacca taaacgatga
     9241 taccttccca gccgttatct acagcaagtt gagccagctc tgcgtcaatt aaggcacgac
     9301 gaaccgcacc gccaccatcg actaacagca ctcgcccttc accctcttct tccaaaactt
     9361 cagcaattaa accgttgctt tcaaagcatt taaccgtggt aatcttccca aagaaggaag
     9421 aagcaccgcc aaagcttgag aaaattggtt caaccacatc aacttggtca gaataaagat
     9481 cgcaaagtgc agaggtatca atacgcataa tatgctcctg ttcgtagatt atttagctaa
     9541 agtataaacc ttcgcccaaa atttgcaaaa ttttatcgaa aaaagaccgc ttacaggctt
     9601 ttttcttatg ctttattttc tagtgaaccg cttttaatat gcaattccat ttggttgtaa
     9661 ggaatagata tacctgcttc accaaaggct aattttactt gttcgataat ttcccaatat
     9721 gctgcccagt aatttggtgt ctgaacccaa gggcgaacaa caagttgaac actatgcggt
     9781 gctaaagcgc cgactgctac tacaggtgcc ggatctttta atacataagt attggcgtct
     9841 aaaatgcgtt ggataatctc tttcgcctct tttaagttag attcataaga aatatcaaag
     9901 gtgaaatcaa tacggcgtgt cgggttgtta gagtagttga tgatgctgtc agaaaacact
     9961 ttgccgtttg gtaataacac ggttttgtta tcgccggtgc gaagttccaa cactaaaagc
    10021 cccatttgtt caaccacgcc ggtcattccg ccggtttcga ttaaatcccc tttgcgaaat
    10081 ggcttgaaga ttaacaacat cacgccggca gcaaagtttt gtaatgagtt ttgtaatgat
    10141 aaaccgatgg ctaaaccggc agcaccgatt aatgcgacca gcgagctggt gttaatgccg
    10201 atttgtgaaa gcgaggcaat caccacaatt aacagcagta aaaaatagct gattgagaca
    10261 ataaaacttt gcagcatttc atctttggtt gattttaatg cggctttacc gagtaaacgg
    10321 ctaattaggc gggcaagaaa tttcccgact acaaaaatcg caatcgccag taaaattttg
    10381 gtgccataag ggataatcca ctcatttagc atagtttcaa tattcatatt actgactttg
    10441 tggattactt tttcggtttc ggcaaccacg tcaatgtttg gagctgtttc ggtgactttt
    10501 tcagtcatat tgtttcctta aaattaaaat gaaaaataag cctagcgaat ttgcctcact
    10561 cgctaagcgg ttttgtgcta gaatttagag caaaattttc tctaaaagac aagataatga
    10621 caacagaaaa agtaattagt gccggcgttc aattttttac gatcagtgaa gatgaagccg
    10681 gacagcgttt agataatttt ttattggcaa agctcaaagg cgtgccgaaa agtttgattt
    10741 accgcattgt gcgaaaaggc gaggtgcggg tgaataaagg acgaaacaaa cccgaatata
    10801 aattacagcc tgatgattta gtgcgtgtgc cgccggtgcg tgtggcggaa aaaaatgaag
    10861 ccccaatttc gactaaatta aacaaagtgg cggagctgga gagccaaatt ctgtatgaag
    10921 atgagtcaat gctagtaatt aacaaacctt caggcattgc agtacacggt ggcagtggtt
    10981 taagttttgg tgtgatcgaa gccttgcgtg cattacgtcc acaggctcgt ttcttggaat
    11041 tggtacaccg tatagaccgt gatacatcag gcattttgct ggtggcgaaa aagcgttcgg
    11101 cgttacgttc cttgcacgaa caactgcgtg aaaaagtagt acaaaaagac tatcttgccc
    11161 ttgtgcgagg gcaatggcag gctcatacca aagtgattaa agctccattg ctaaaaaacg
    11221 aacttgccag cggtgagcga attgtacggg tgagtgaaga gggtaaaccg tccgaaaccc
    11281 gtttcagcat tgaagagcgt tatgccaatg ccactttggt gaaagcttcg cctattaccg
    11341 gaagaaccca ccaaatccgt gtgcataccc aatatgccgg acacccgatt gcgttagatg
    11401 acaaatatgg tgatgcggaa tttgacagca aaatgaaaga agtgggctta cagcgtttat
    11461 ttctgcacgc ccatgctatt cgttttgaac accccaaaac cggcgaagaa atggtcatta
    11521 ccgccccgct ggataaaact ttaaaaggcg tattggcaaa attaagggct aattactaaa
    11581 taacttaatg agagagtaag atagcgcaag cgtccacgct tgtgctgtaa atcaacatag
    11641 agtggtacaa gcgtggacgc ttgcaccaac aaaatataag caaaaatatg caaatccatt
    11701 tcaaaaattt tcaaaaaaat gaccgcttgt tagatttaac cacaccgcaa attatgggga
    11761 tcttaaactt cacgccggat tcattttccg attcgggcaa gtttttttcc ctcgataaag
    11821 ccttgttcca agcggaaaaa atgttagctg atggggcaag cattattgat attggcggtg
    11881 aatccacccg ccctaatgcg gcgattgtga gcttagaaca agaattagag cgtgttgtgc
    11941 cggtggtgga ggcgatccgc agccgttttg attgcttgat ttcggttgat agctccaaag
    12001 cagaagtatt caaagagtcg gcaaaagtcg gtatggatat cattaacgat attcgagcct
    12061 taaccgagcc gaatgcgttg gcagcggcag tagaattggg cttgccggtt tgtttaatgc
    12121 atatgcaagg caacccgcaa acaatgcaac aaaatccgca ctatgatgat gtgttggaag
    12181 atgtggcaga tttcttaaat caacggattt tcgagtggca tcaccgcagg cattcccaaa
    12241 gaacacatta ttttagaccc cggttttggc tttggtaaaa gcgtgaaaca caattaccaa
    12301 ttattgaaac accttaaagc ctttgtggat tcaggcttcc ctgtgcttgc cggactttcc
    12361 cgtaaatcaa tgattggtgc ggtgttagat aaaccggtag aacaacggct acttggctct
    12421 gtagtagggg cgttattagc cgctcaaaat ggggcgaaaa ttttacgggt gcacgatgtg
    12481 gcagaaaccg ccgatgcgtt aaaaatctgg caggcaatgc tggaatcaga taatgaggaa
    12541 aaatgatgac aaccttagtt tatggcatta aaaattgcga cacagtaaaa aaagccttga
    12601 aatggctcga agatcataat caaaacccac aactgcacga ttaccgtgtg gacggtttaa
    12661 atgccgattg gttagtggaa atggaagcaa aattcggttg ggaaaactta gttaataaac
    12721 gtagcaccac ttggcgaaac cttgatgagg aaattaaaaa caaccttaac cgtgagtcgg
    12781 cattaaaagt gctaaccgaa cagccgaccc taattaaacg cccgattgtg attaaagagg
    12841 atattgcttt gattggtttt aatgagaaag agtatgtggc tgcgtttaat taattttttc
    12901 ccctgcttgt agggacaggt cctgtgcctg tccgtagtct ttaggattgt tcgggcgggc
    12961 acaggacccg cccctacagg atatatagca aaaaattcac ccaaaacaac cgcttgtaac
    13021 ctatgaaaaa tgaaattatt tcccttgcac agaacctaat ccgccgtgat tccatcagcc
    13081 cacaagacaa aggctgtcag caagaaattg cacaacgtct tgaaaaactg ggctttaata
    13141 ttgaatggtt gccgtttggc gacaccttga atttatgggc aacgcacggc tcggaaaatg
    13201 gtaaaacaga gccttgcatt gtgtttgccg ggcatacaga tgtggtgccg gtaggcgatg
    13261 aaagccaatg ggcttatccg ccgttttcgg ctgagattgt agatggaatg ctttatgggc
    13321 gaggggcggc agatatgaaa ggctcgctct cggcgttagt tgtggcggca gaaactttcg
    13381 tgcaacatca cccaaaccat aagggcaaag tggcattatt gattacctcc gatgaagagg
    13441 cagcagccaa agacggtacg gtaaaagtgg ttgaaacctt aatggctcgc aatgaagcgg
    13501 tacattatgc ggtagtgggc gaaccgtcta gtagcaaggt gtttggcgat gtgattaaaa
    13561 acggcagacg tggttcaatt acggcagatc tctatatcga gggcattcaa gggcacgttg
    13621 cctatccaca tttggcggaa aatccggtgc atacgtcact gggtttttta accgagctga
    13681 ccacttatca gtgggataac ggtaacgaat ttttcccgcc taccagtttg caaattgcca
    13741 atatcaaagc cggcacaggc agtaataatg tgattccggg cgagctttat gtgcagttta
    13801 acttacgtta ttgcactgaa gtgaccgatg aaatcatcaa agccaaagta gcggaaatgc
    13861 tcgaaaaaca cggtttgaaa taccgaataa gttggaattt atcaggcaaa ccattccttg
    13921 ccggcaatgg aaaattggtc gaagccgcct tacaagcggt cgaaaatgtc acaaaaatta
    13981 cgcctcgttt agacacaggt ggcggtactt cggacggtcg ttttattgca ttaatggggg
    14041 cagaggtagt ggaatttgga ccactgaacg ccactattca caaagtgaat gagtgtgtga
    14101 gtgcggatga tttggcacat tgtggcgaaa tttattatca aattttagaa aaattattgg
    14161 caactgcata accctaaata ggcagaatgt tatcaaattg tattctgcct attttttatg
    14221 tagctattct gttaaacagc gtttacacta gcggcagttt ttatatttat aggtaaatgt
    14281 tatgcaactc tactcttata tctgcttgct gtttgggctt gcgatgttta tttcgttttt
    14341 tacccgaaaa ttaaacgaaa atattcaaac cactattgca attacagcct ctgcccttgt
    14401 cggctccctt cttattctta ccttcggttc tctcggctgg tttaatgttg ataaacttgc
    14461 catttccatt tttgaacaac tcgattttaa aagcttcctg ttaaacggaa tgctggggtt
    14521 cttgcttttt gccggttcac ttgggattaa actaccatta atgaaagagc aacggcggga
    14581 aattgcagtt tatgccttat tttcaacctt agtttctact ttcttgatcg gtgcgttaat
    14641 ttatggcgtg gcaaggctac ttgggttaga gctcggcttt gtgtattgtt tgctgtttgg
    14701 ctcactgatt tcgccaaccg acccgattgc cgtattggca attatcaaaa gcctgaaagc
    14761 cccaaaacgc ctttcgatgc acgtggaggg cgaatctctg tttaatgacg gtatcggctt
    14821 ggtgattttt accactatct ttgccgttgc ttttggcgga caagaaccaa accttagcgg
    14881 tattaccgga ctgttcttgc aagaagcggt aggcggtatc gtttttggct tattaaccgg
    14941 ttttgtggca cataaattta tttccgcaac cgatgacgga agccttgaaa ttttaattac
    15001 gctaacgatt ccaacagtcg gctttgtgat tgcaaactac ctacacgttt caggggcatt
    15061 aacaatggta gttgccggta ttatgattgg caactggact cgccgttccg gtttctccga
    15121 acagagccaa aaatatcttg atcacttctg ggagatgatc gaccattcat taaactacct
    15181 gttattcctg cttatcggct taagtacact gttagttgat ttcaccttta ttggtggggt
    15241 gttaatgttg gcagcaattc caatttgttt gcttgcacgc tatatcagcc tgtggattcc
    15301 ataccaagtg ttaaaacgtt tccgtactta taacccgtac accttaaaaa ttatgacttg
    15361 gggcggttta cgtggtggat tagcccttgc gatggcactt tccgtaccgg caggggctgc
    15421 ggtggtatcg agctcagaag gcaatcttga tgtacgtgat ttgattttgt taatgactta
    15481 tgcggtagtc actttctcga ttttagtaca aggttcaacg gttgaaccga tgataaaaaa
    15541 atccaagttg gtagatccaa gaaaagtggc actcaataaa ttaggtgcac ctgatgatgt
    15601 aattccacat atttaatagc atttataact gaataacata tcattttgct aaagattatt
    15661 agccatctag acggctttat atttaaatac ctctcacgtt aatttgttga gaggtatttt
    15721 ttatgttatt cacaggatta ttatgtggct ttctactcgg gtttgtgatg caaagagggc
    15781 gtttttgtat taccggagca tttcgtgatc tctatgtaac aaagaatagc cgtatgtttg
    15841 tggcactttt aattgcaatt acggtgcaat cgatcgggat ttggcttttg tatgaagccg
    15901 gctcttttag ttctccggcg gaagatttgc ctttgctcgc agtgatcatt ggggcatttc
    15961 tgtttggtat cggcattatt tatgcaggcg gttgtgctac aggaacgtgg tatcgtgccg
    16021 gtgagggttt aatcggcagt tgggttgcac tggttattta tgggctgttt tctgcttcta
    16081 tgcgaaccgg tgtgttagcc ccacttaatc aagagctaaa aagcaatgta attcaacacc
    16141 gcacgattta tgaaacattt ggtatttccc cttgggtgtt agtgtttatc ctgagtgtaa
    16201 ttacattggc attatccgcc cacagcattt aaaaggttaa ttttttaagg agtaataaag
    16261 atgaacgtac gtttacctgc ctcagggctt gtttgcccgt ttccattagt cgaagccaaa
    16321 gcggcgatgg caaaattgaa taaaggcgat agcttaacga ttgaatttga ctgtactcaa
    16381 gcaaccgaag ccattccaaa ttgggcggaa gaggaaggct atgaagttac cgattaccaa
    16441 caacttggtg atgccttgtg ggaaattacg gtggttaagt aattagcaat aaaaaagctc
    16501 tacttttttg tagagctttt gctttgagtt ttgtatttac taaggattag agtaaacccg
    16561 gttgacctaa tgctgggtct gttgctcttg cagcaatagc atcttcaacc gtcataccta
    16621 atgcttttgc cacaccttca ccatatgccg gatcacaggc atagcagtta cgaatatgac
    16681 ggtatttaat gaagtctaat gcatcgccca tacctgcagc agtattattg aataatgctt
    16741 gtttttgttc atcattcatc atattgaaca atacacgtgg ttggctgaag tagtcagcat
    16801 cgtcttcacg atagttccag tgggctgcat caccattaat tttcagtggt ggctctgcat
    16861 attgagcttg ttcttgccat ttgccgaagc tgtttggttc gtagtgaatg gtactaccgt
    16921 agttaccgtc cacacgacct tgaccgtcac gagcgttgct atgaaccggg caacgtggag
    16981 cgtttacagg gatttggtgg tggttcacac ctaaacggta gcgttgagca tccgcatagt
    17041 tgaataaacg agcttgtaac atacggtctg gagacacgct gatgcccggc actaagttac
    17101 ttggtgcgaa tgcagattgt tccacatcag caaagaagtt ttcagggtta cgatttaatt
    17161 caaactcacc cacttcaatt aacggatagt ctgatttcgg ccatacctta gttaaatcga
    17221 acgggtggta tggtactttg tctgcatcag tttcaggcat aatttgaaca aacattttcc
    17281 atttcgggaa atcgccacgc tcaatcgctt cgtataaatc acgttggtga ctttcacgat
    17341 cgttagcgat aatagcggct gcttcttcgt tagttaagtt tttaatgcct tgttgtgtat
    17401 ggaaatggaa tttcacccag aaacgctcat tagctgcatt gatgaagcta taagtatgtg
    17461 agccataacc gtgcatatga cgatatgaag ccggaatacc acgttcactc attacaatag
    17521 tcacttggtg aaatgcttct ggtaataatg tccagaaatc ccagttgtta gttgcagaac
    17581 gcatattcgt gcgtgggtca cgtttaaccg ctttgtttaa atccgggaat ttacgtgggt
    17641 cacgtaagaa gaacacaggg gtgttgttac ccaccatatc ccagttacct tcttcggtat
    17701 agaattttaa tgcgaaacca cgaatatcac gctcagcatc tgccgcacca cgttcacctg
    17761 caacggtggt gaaacgagca aacatttcag tttttttacc gacttggcta aaaattgccg
    17821 cacgagtgta tttagtgatg tcgttagtta cagtgaaagt accgaacgca ccggaacctt
    17881 tagcgtgcat acgacgctca ggaatgactt cacgcacgaa gttcgctaat ttttcattta
    17941 accataaatc ttgcgctaat aatggaccac gtggacccgc tgttaagctg ttttggttat
    18001 caacaacagg tgcaccgttg ttcattgtca aatgtgtaac aggacattta gacataatag
    18061 aatcctcata aattagaaat aagataggta attaatccga agagaattat aggtgttgta
    18121 gattttttct caatctatca atttgataat taatgactat taaatattaa ttttaaatag
    18181 ttgattttaa ttgtcaagta ttctgagaaa gatgataagc ggtcattttt ccactatttt
    18241 ttgcagtatg taggtgtaaa aattaacggc cgagaagtag atttcaacaa agaatagata
    18301 ataaaaaagt acatatttaa gaaatatgta ctttttatga ttttatttgc ctaagttatc
    18361 aaagaatttc ttcacaccat caaagaaacc ttcgtgtttc ggacgatgtt taccttgtcc
    18421 ttctaaactc tcttcaaatt gtcgtaatag tgctttctgt tcttcggtta aattcacagg
    18481 cgtttcgacc accactttgc agattaaatc ccctgcgtag ccaccacgag ggcttgttac
    18541 ccctttgcct cgtacacgga atagtttacc ggtttgagtt tctgccggaa ttttgagttt
    18601 taatttgccg tctaaagttg gcacttcaat ttcaccgcct aaagctgcaa gggtaaagct
    18661 aatcggcact tcacagtata aattcgaacc gtcacgctca aaaatatcgt gttctttaac
    18721 gtgaatcacc acatataaat cgcctgccgg tgcgccattt tcgcctgcag ctccctctct
    18781 cgataagcga agttgattac cggtatccac acctgccgga atggtaacag agaggttttt
    18841 cgctttctgt acacgtccat cgccgtggca agaacggcac ggtttttcaa tgcgtttacc
    18901 tgtaccgtga caacttggac aaactgcctc agtcacaaag aaaccttgct gacggcgaac
    18961 tctgccggag ccgtgacaat gcgaacaggt ttccactttg ctccctgctt ccgcccctgt
    19021 accatgacaa gtatcacatt cagctaaggt ttgaatgcga atatcttttt tacagccttt
    19081 cacagcttct tcaagggtga tctcgatgtc gtaacgtaaa tcatcgccac gtaccacacg
    19141 ttggcgacgt ccaccgccac caaagccacc gccaaacatt tcgctgaaga tgtcttcaaa
    19201 accaccgaaa ccaccgccgc caaagccacc gaatccgcct gcaccggcac cgccttgttc
    19261 aaaggcggcg tgaccgtatt ggtcgtacat cgcttttttc tcgctgtcgg tcagcacgtc
    19321 ataggcttcg gtaatctctt taaatttctc ttccgactct ttactgcctt ggtttttatc
    19381 cgggtgatgc tttgccgcca aacgtttata tgctcgtttg atgtctttct cgcttgcccc
    19441 tttagacagt ccaaggactt cgtaataatc tttctttgcc attgttgttc cgtttgtaaa
    19501 tttttctgtg tttttgaccg cttgccctcg ccccttgtgg gagaggggta ggatggttaa
    19561 ttccccctct ctctgaaaaa tatttctgaa cgaaatattt ttcggtctct ctcccacaag
    19621 gggagagagt tttatataat taaatgggat ctagccaaga tggctcaaga tgacacaagc
    19681 gtggacgctt gcgctatcaa aagcctaaca atgcggattc accgcaatat aaatttctac
    19741 tttgccgtct gctaaatgtt tttcaaaatc tttggtgtaa gctcgtttga gcaaaccttg
    19801 tttggaacgg ttttcaatca cagaccaagt gtctgccaaa agagcttcgg tagttggaat
    19861 ttgctcaaac caaacaaaat cgtccattaa aatcgcggta ttgctgtttt ccgtttctgt
    19921 ggcaatgacc gtttcgccac ttttatgatc gtatatttta taaaacggtg gctgtacatt
    19981 ttccgttgta gggtagagtt ttagcatttg taaaatttcc tttgaaaagc accgcttgca
    20041 cagccccaaa ggggctgaat tatgtgtaac ctagcacggc tcgtgctagg tggtatatat
    20101 ctacacaaaa ggggcgaaag atatttcgcc cctacaagtt acgcaagatt atttattatc
    20161 tttcacttct tcaaattccg catcgaccac gccgtcatct ttttgagatt gttgtggttg
    20221 ctcgccgcct tgtgcttttg cttgtgctgc ttgcattaac ggttctgaag ctttgattaa
    20281 cgcttcgatt ttcgcttcga tctcggcttt atcttcgcct ttagctgcgg tttctaactc
    20341 agaaatagcc gcttcgatct tcgctttatc gtctgcgttt aacgcatcgc ctgcttcggt
    20401 aatttgctta cgggttgcgt gagcaatacc gtctgcttgg ttacgagctt gaactaactc
    20461 ttcaaatttt ttgtctgctt ccgcattcgc ttctgcatca cgcaccattt gttcaacttc
    20521 agcatcgctt aagcctgaag atgcttgaat tttgatttgt tgctctttgc cagtgttttt
    20581 atcttttgca gagacattga taataccgtt agcatcaata tcaaaggtta cttcaatttg
    20641 tggcataccg cgtggagcag ggttaatacc ttcaaggttg aattgaccta aagatttatt
    20701 atccgctgca cgtttacgct caccttgtaa cacgtggata gttaccgcag attggttatc
    20761 ttccgctgtt gagaacactt gtgatttctt ggttggaatc gtagtgtttt tctcaattaa
    20821 ggtagtcatt acaccaccca ttgtttcgat accaagtgaa agcggagtaa cgtctaataa
    20881 caatacgtct gttaccgaac cacttaacac accgccttga accgccgcac cgattgccac
    20941 agcttcgtcc gggttaacgt ctttacgcgg ttctttgcca aagaagtctg ccactttttt
    21001 ctgtactaac ggcatacggg tttgaccacc gactaaaatc acatcgttga tgtcgcctac
    21061 tgataaaccg gcatcagcta aagcggtttt taacggctct aacgaacggt ttactaaatc
    21121 ttcaactaaa gattccaatt tcgcacgggt tactttaatg tttaagtgtt tcgggccggt
    21181 tgcatctgcc gtgatgtatg gaaggttcac ttcagtttct tgtgcagaag aaagttcgat
    21241 tttcgctttt tccgctgctt ctttcacacg ttgcattgcc attgggtcgt tgcgtaaatc
    21301 aacgccttgt tctttttgga attcttccac taagtagttg attacacggt tatcgaagtc
    21361 ttcaccacct aggtgagtat cgccgttggt tgcacgcact tcaaaagttt gctcgccgtc
    21421 aaagttatca atttcgataa tcgaaatatc gaatgtacca ccacctaagt cgtaaacagc
    21481 aatcgtttgg ttctctttct tagaatctaa accataagca agcgctgccg ctgttggttc
    21541 gttgatgata cgttttacat ctaaacctgc aatacgaccg gcatctttag ttgcctgacg
    21601 ttgtgcatcg ttaaagtatg caggcacagt aataaccgct tcggttaccg gttcgcccaa
    21661 gaaatcttct gcggttttct tcattttttt caagatttca gcagagattt gcggcggtgc
    21721 taatttatcg ccttttacgg ttacccacgc atcgccgtta tctgctttgc tgatttcaaa
    21781 cggcataatt tcaatatcac gttgcacttc agcatcagta aaacgacggc cgattaaacg
    21841 cttgattgca aataaagtat ttttcgggtt agtaattgcc tgacgttttg ccggctgacc
    21901 aactaaggtt tctttatcgg tgtaagcgat gatagatggc gttgttcttg ccccttccgc
    21961 attttcaatt acacgaggtt tgtcgccgtc cattaccgca acacaagaat ttgttgtacc
    22021 taagtcaata ccaatgattt tacccatttt tatgattcct ataataataa attcagtttg
    22081 aataagaaac gggattgcat ttcccgttca gacgaaatca taaataggga cgaaaatgca
    22141 ctgttcaagg gcaaaaataa aaaaattgca aaatttttgg aaaaagtaac cgcttgtatg
    22201 tgggggagat ttggcagaat atttcacgga gaaaatacct cctaccttgc atacccctca
    22261 atagcttttt atacttacgg caactcaaac agagaaggat ataatatgaa actgattact
    22321 accattatcc aaccttcaaa attagaccaa gtgcaagatg cactttcaga aatcggtatt
    22381 caaggaatga ctattaccga agtaaaaggc tttggacgcc aatatgggca taccgaacaa
    22441 gagcttagcc aaatgagccg cattgacttt cgtcctaaaa ttaaggtgga gatattggtt
    22501 tctaattacc aaaccgatga agtgatcgat gccattctca atgcatccta ttctgggcaa
    22561 gtgggtgatg gcaaaattta tgtagcgaat attgaacaag ttatccgcac ccgtaccggc
    22621 gaaactgacg atgaagcagt ctagccattg ctagcagaga agctttttat tatcgtgttt
    22681 tagagttata ttttcaacct tactaaagca aattttctaa tttggtgtga attaaatgtt
    22741 tgttttttgt gtaatacggg ttattatagt aatcaaaaat agttaggttt taatggaaat
    22801 agacattctt tgttatgcta aataaacaca ttaataaaat tatcaattct tcattttctc
    22861 ttgcattttt tacattaact agttttgcta ccgcttactg ttacggttgg ggacaagcca
    22921 tatttcatgg ctacccttgg tggcatgttg aaatcggcaa tgccagtatg gcaagaagtt
    22981 tggcttatgt attcggtact tccgtcatct tattcttgtg ttatgcacta ggttatagtt
    23041 tactaaataa agtttttcag ctgcattatt tccgaaatct aggttggtta agggtgattg
    23101 tgttggtttc tgtgtttaca gtgcctgtta ttcttacttt ttacttattt accgggatag
    23161 tgcccattta tatctctttt atctatattt ttgtaagtgg tgtgagcgta ttcttcttcc
    23221 gcaagagatg gaataatacc aagtttgatc tggactttag aaagatgcta ttaggaggaa
    23281 gttttgccct gtttaacatc tttatttttc tctatttcag tttgctctca ttgcatattg
    23341 gttatttgcg tgccggacta agaactacct atgattacat cgaaatagag aatcaaaaat
    23401 actacatatt atccaccaac agtgataacg gctacattat gggaacaaaa ataagaggta
    23461 atcaatcttt cttgtttttc aatcgtgata ctcatcaata ctaccatgtt catattgaac
    23521 aatgtacgga tagccgatta tgcaaagtaa tagtttgagg taattatggc attacaccgt
    23581 tgtccggagt gtcgaaagcg tattagcgac agtttagaac attgcataca ttgtggcttc
    23641 tcgtttaaag aagccgattt agcgatatat cggcaaaagt tagaacagcg ccgattacac
    23701 aaccaggaga tcaaccgcaa aagcgtaaaa ttacaactta tttggttagt tatttttatt
    23761 gcggtaattg ctctcgcaag ttggataacc aattgaaata aaagcccgg
//
LOCUS       DANLTI010000026        23466 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.026, whole genome shotgun sequence.
ACCESSION   DANLTI010000026 DANLTI010000000
VERSION     DANLTI010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23466
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.026"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1604
                     /gene="pckA"
                     /locus_tag="PXB09_000809"
     CDS             <1..1604
                     /gene="pckA"
                     /locus_tag="PXB09_000809"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDL5232948.1"
                     /translation="NRIEQELADLGITNVKEIVRNPSYEQLFEEEMKSDLKGYEKGVL
                     TNLGAVAVDTGIFTGRSPKDKYIVLDETTKDTVWWTSDAAKNDNKPMTQSTWQSLKTL
                     VTDELSNKRLFIIDAFCGASPEHRINVRIITQVAWQAHFVKNMFIRPTEEELKDFKPD
                     FVVMNGSQVTNPNWKEQGLNSENFVAFNITEGVQIIGGTWYGGEMKKGMFSMMNYFLP
                     LKGVASMHCSANVGEEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDENGVFNYE
                     GGCYAKTINLSIENEPDIYRAIRRDALLENVVVREDGTIDFDDKSKTENTRVSYPIYH
                     IDNIAVPSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGIT
                     EPTPTFSACFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWNGTGKRISIKDTRG
                     IIDAILDGSIEKAEMSTLPIFNLAIPTALPGVETHILDPRNTYEDKAQWQAKAEDLAG
                     RFVKNFEKYATNEEGKALIAAGPKL"
     gene            1697..2698
                     /gene="bioB"
                     /locus_tag="PXB09_000810"
     CDS             1697..2698
                     /gene="bioB"
                     /locus_tag="PXB09_000810"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDL5232949.1"
                     /translation="MTTFQLRLKAKDELTPHPTAQYWRKCQVEGLFDLPFMDLVFRAA
                     QVHRENFDANAIQLSTLLSIKTGGCPEDCEYCPQSARYDTGIEKQTMLDVETIVEKAK
                     IAKERGASRFCMGAAWRGPRPKDIKVVSEIINAVKSLGLETCGTFGMLEEGMAEELKQ
                     AGLDYYNHNLDTDPERYNKIIHTRNHEDRMDTLGKVRNAGLKVCCGGIVGMNETRPER
                     AGLIASLANLDPQPESVPINQLIKVEGTPLTNAEDLDWTEFVRTIAVARITMPQSFVR
                     LSAGRTTMPEAMQALCFMAGANSIFYGDKLLTTENPEEDHDRQLMDKLDLYPLQYIA"
     gene            2858..2955
                     /gene="ffs"
                     /locus_tag="PXB09_000811"
     ncRNA           2858..2955
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PXB09_000811"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            2990..3697
                     /gene="gloB"
                     /locus_tag="PXB09_000812"
     CDS             2990..3697
                     /gene="gloB"
                     /locus_tag="PXB09_000812"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDL5232950.1"
                     /translation="MLQITPIPALKDNYIWAIRNGQDVIIIDPSEHQPALNFIAKNAL
                     NLTAILITHNHHDHTDGVSGIVEQYPNIPVYGPQEVAEFANVIVSPEQHISLFGYDVR
                     IIESGGHTAGHISYLFGYDYLFCGDALFSGGCGRVFTGDYQAQFDALQRFKNLPNSVK
                     AYPAHEYTKSNLKFAEAVLPPSCVLSEYQEQVDLLRSQNKPTLPTTIGLEMQVNPFMQ
                     AVDLAEFIALRQQKDNF"
     gene            3856..4569
                     /gene="uppS"
                     /locus_tag="PXB09_000813"
     CDS             3856..4569
                     /gene="uppS"
                     /locus_tag="PXB09_000813"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDL5232951.1"
                     /translation="MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSA
                     VSFAAKHHIQVLTLYAFSSENWSRPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIG
                     DKSAFSENLQKRIAESEKLTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAV
                     EQITPALFQQHLVTENQPQVDLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDE
                     AFSDAIYAYQQRERRFGGC"
     gene            4593..5462
                     /locus_tag="PXB09_000814"
     CDS             4593..5462
                     /locus_tag="PXB09_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDL5232952.1"
                     /translation="MLKERVLSAIIMIIAVLAAIFWLSPLPLTLVLSAIVVAAMWEWA
                     QFAGFKHPVPRAIVAMVTICLLLFAIVANTDYIRATRFITDETTPILFIGCIWWLIAL
                     VLVATYPNSAKLWEKSVAAKFLFGLATLVPFLIGTLALRFHNYAFDPYQGTYLFLYVC
                     LLVWGADSGAYFAGRAFGKRKLAPKVSPGKSWEGVIGGVLTSSLIAFTFLQLTPANVF
                     GKALATTPFILVSVGMVAISVLGDLAESMFKRQAGIKDSSQLIPGHGGILDRIDSLTA
                     AVPFFATFFFFVL"
     gene            5466..6776
                     /gene="rseP"
                     /locus_tag="PXB09_000815"
     CDS             5466..6776
                     /gene="rseP"
                     /locus_tag="PXB09_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDL5232953.1"
                     /translation="MTSIIAFFILICVLVFVHEYGHFWAARKCGVKVIRFSIGFGKVL
                     FKKKDKQGTEFVFSLIPLGGYVQMWNDETDINAPAQQALNTKSVLQRAFIIIAGPAAN
                     FIFAILAYWVVFIAGIPTVKPVIGEILPNTIASQARIPTELEITKIGHQSIQDWESAS
                     LALVGFVGNKNVPLEGNINGNSTQKYELDLSNWSIDSAKENPLTALGIRPKSAKVTAE
                     IKQVVENSPASQVGIQAGDRILQINQQPFNWFNLVELVQAGKPIELKIEQRGQIKDLV
                     VQPEKKDERYIIGVIPSYEPLADKYRTELKYDILTAFYKSIEKVWSLTQTILQFIGNL
                     ISGDLSIKNLGGPISMAKGAGATAEIGLVYYLSFMALISVNLGVMNLFPLLPLDGGQL
                     VLLAVEAIRGKALSEKIQLKFQQIGFAFVLSLMLFAFANDIIHF"
     gene            6891..9272
                     /gene="bamA"
                     /locus_tag="PXB09_000816"
     CDS             6891..9272
                     /gene="bamA"
                     /locus_tag="PXB09_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDL5232954.1"
                     /translation="MKKLLLSSLLIANGVVAAPFVVKDIRVEGVQPTTGESIISSIPV
                     RVGQTATDTDVSNVVRHLFSQQRFADVRATREGNTLVIKVAEKPIIGKVEIEGNQAIP
                     KDALEQNLKANLINQGEIFDAAKLEAFKEGLIEHYHSTGRYEAKIDTSVSNNTEGGVN
                     IKLAINEGEVAKAKTIKFEGNNAFSDKKLLENLDIQPDVSWWNIFESSKFEQTAYQKD
                     LETLRDFYLNRGYAKFAIQDTDVQFNDNKTEVALTYKLDEGSQYHVSEMRIIGNTANM
                     DSQLNALLKEFKPGQLFRKSDLTQIEEEIKSILGDAGYGSAKVDIYPQFNEENKTVKI
                     SFVVDAGRRIYVRKIRFEGNGVTADSTLRREMRQQEGAWLSTNKASLGKARLERTGFY
                     ESVDMSMPNVEGTADQVDVVYKIKERNTGSINFGIGYGTKNGISYQAGIKQDNFLGMG
                     STISLNGTRNNYGTSVNLGYTEPYFTKDGVSLGGNIFYEDYDNSDNDSMASYKRQTYG
                     INGTLGFPVNENNSYYLGLGYTHDKIKNAAREYTREKYVKSMNFEFDPAADYYKKIKA
                     DDFDFSLGWNYNSLNRGYFPTEGTTANIGGKITIPGSDNKYYRVSADFRNYYPLNREH
                     KWVISTKASIAYTNGFGGKEVPFYQLYTAGGIGTLRGFSYGAVGPQAIYYNTKSGKFD
                     SMNNDIIGGNALAAASLELITPTPFVSEKYQHNVRTSLFVDAASAWNTKWKKDEYTNL
                     PDYGDFKRFRASAGIAFQWMSPIGPLSFSYAKPIRKYDNDDIEQFQFNIGSSF"
     gene            9352..10143
                     /locus_tag="PXB09_000817"
     CDS             9352..10143
                     /locus_tag="PXB09_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HDL5232955.1"
                     /translation="MKKLFKMTGLAVALASTTGIANAADTIGFVDPSYVLQNHPVLLD
                     ASAKFDKFMKESQEKFAADEKKLADENKTLTAERNKINEDAQKLQNEQKNVEASIKKK
                     VAALEKDAPRLRSKEIQARQNAIQKEANAFQAKVTAIQKREADFAKKAEAFQKRADEF
                     QKRIEQANKENGGINPQEAQKQAVDEVNATIKEIAKSKGYTLVLQPQVALYAEDEGKD
                     ITEAVLDAIVKKHPEIKIEKPATEAQPATEKETKAEETKPEEAKK"
     gene            10143..11168
                     /gene="lpxD"
                     /locus_tag="PXB09_000818"
     CDS             10143..11168
                     /gene="lpxD"
                     /locus_tag="PXB09_000818"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDL5232956.1"
                     /translation="MANFRLIDLAEHIGGTLRGNADLAIQSIAALDKADSSQITFISN
                     AKYRENLTACNAGAIIVSPADVEFCRADQNLIIVANPYVAYAQLAQYMDSTPKAASEI
                     HPSAVISPEAKLGNNVSVGANAVIESGVELGDDAVIGAGCFVGKNSKIGARTQLWANV
                     SVYHNVQIGADCLIQSSTVIGSDGFGYANDKGQWIKIPQTGGVIIGNRVEIGACTCID
                     RGALDPTVIEDNVIIDNLCQIAHNVHIGFGTAVAGGVIMAGSLKVGRFCQIGGASVIN
                     GHMEICDGAIITGMGMVMRPITEKGIYSSGIPLQTNKEWRKTAALVMNIDEMNKRLKS
                     LEKRFND"
     gene            11197..11655
                     /gene="fabZ"
                     /locus_tag="PXB09_000819"
     CDS             11197..11655
                     /gene="fabZ"
                     /locus_tag="PXB09_000819"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDL5232957.1"
                     /translation="MTTENREPNIIEVTEIMDMLPHRYPFLLVDRVTDYEEGKWLKAI
                     KNVTFNEPCFTGHFPGAPIFPGVLILEAMAQATGVLAVATYGKLSEDELYYFAAIDNA
                     RFKRPVVPGDQLQLEVEFLKEVRGITKFTGKAYVDGKLVCEADLMCARRK"
     gene            11689..12483
                     /gene="lpxA"
                     /locus_tag="PXB09_000820"
     CDS             11689..12483
                     /gene="lpxA"
                     /locus_tag="PXB09_000820"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDL5232958.1"
                     /translation="MRLIDSTAKISPLAIIEEGAEIGAHVEIGPFSVIGKDVKIGART
                     KIHSNVVINGMTEIGEDNHIFQFASIGEINQDLKYQGEPTKVVIGNRNRIRESVTIHR
                     GTVQGGGVTKIGDDNLFMINTHIAHDCSIGNRCIIANNGTLAGHVTLDDFVIVGGMSA
                     IHQFVVIGSHVMLGGGSMVSQDVPPYVMAQGNHARPFGINFEGLKRRGFDKPTMHAIR
                     KVYKLIYSSGKTLEECLVEIEQIAATEPAIAIFKQFFKRSTRGIIR"
     gene            complement(12521..14521)
                     /gene="mnmC"
                     /locus_tag="PXB09_000821"
     CDS             complement(12521..14521)
                     /gene="mnmC"
                     /locus_tag="PXB09_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDL5232959.1"
                     /translation="MGKLTFATLTFNDADTPVSEQFDDIYFSTQDGLAESYYVFQEGN
                     QLWEKWQSHPKEAFVIAETGFGTGLNFLAVADKFQQFRAAFPQSKLKRLYFISFEKFP
                     LTASQLADIHQRYPQFATLSENLTACWQPRQIGCQRYHFEQVYLDLWFGEIAENLPQL
                     GDLYSGTIDAWFLDGFSPDKNPEMWNEQLYLQMFRLSANGGSFATFTASSMVRRGLEA
                     AGFAVKKRKGFGKKREMLWGEKPLDSQVSEPNYPYFYAKNETADDIAIIGGGVASFFV
                     ALSLLEKGKQVTLYCKDETLAINASGNLQGAIYPQLSDDDERNVQFYIHSFDYALQRL
                     QQLKSNIEFEHNLSGVVLYAYDEKTAKKLEKMVEQTADDTLLKSCSQAELSEKLGLSV
                     PNSGAFIPQAGWLSPVQLVRNGFTWLEQKGLKIVLNHKVEHLTFSNGMWQWQTRGETV
                     RHQAVVLANGHTLNEFSQANGIPLYPVRGQVSQIPTTSELQKLKCVLCYDGYLTPMSA
                     YGTHCIGASHIRDNAETEFSLSEHWENVAKLQQNVTVCEWTQGIDLSENKAKVGIRAA
                     FRDRVPMVGAVHHFEQQKSQYANLYNQLRRKQAVENAEIFTNLYMVNGLSSRGLTTAP
                     LLGELLASLIVNEPVPISEDIWHNLSPNRAWIRKLLKGSTVA"
     gene            complement(14746..16182)
                     /gene="trpCF"
                     /locus_tag="PXB09_000822"
     CDS             complement(14746..16182)
                     /gene="trpCF"
                     /locus_tag="PXB09_000822"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDL5232960.1"
                     /translation="MQNIVQDNAQPNQPTILQKIVQDKAIWVAQKEQAFPLSEFQHKI
                     VKSDHDFYAALAKGTHQEPAYILECKKASPSKGLIRAEFDLDSIAQVYKNYAAAISVL
                     TDEQYFQGDFRYIDQVKRQTTQPILCKDFMISAYQVYLARFYNADAILLMLSVVNDET
                     YRELATLAHELGMGVLTETSTEAEFERALALGAKVIGVNNRDLHTLTIDMNRIVRLVE
                     KYQAQISADVCLISESGINDHQQVKNIKPYVHAFLIGSSLMGSADLNNAVRAVIFGEN
                     KVCGLTRVQDVKAVYEQGALYGGLIFAEGSPRQLSLRQAQELVVNAPLRYVGVFQNQA
                     VEFVEKMAKQLELFAVQLHGSEDEQYIAELAEKLGSKTQIWKALSVDVEVENLEFNDN
                     PQIARYVLDSKVGNQQGGTGKTFNWALIPETLKQKALLAGGIGTENIEQALAQGCVGL
                     DLNSGVESAKGVKDLQKLTACFGKIIQA"
     gene            16270..16581
                     /locus_tag="PXB09_000823"
     CDS             16270..16581
                     /locus_tag="PXB09_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDL5232961.1"
                     /translation="MKSQVIQHLSYLEIALRVNQLWEATPPSPEALANEQPFCVETLT
                     PTQWLQWIFIPRMRAILDANADLPRNFAITPYLEEALKNEGYLQAICEPLLGLEKLLK
                     D"
     gene            16735..17463
                     /gene="truC"
                     /locus_tag="PXB09_000824"
     CDS             16735..17463
                     /gene="truC"
                     /locus_tag="PXB09_000824"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDL5232962.1"
                     /translation="MTLDILYQDNSLIAINKPAGVLVHRSWLDKHETVFAMQTLRDQI
                     GQHVFPIHRLDRPTSGVLLFALNSETARIMSEQFEQHLVQKTYLAVVRGYLQGSAQID
                     YPLKVILDKIADKFSQEKEAQAAITDYKGLATVEMPYPVGKHQTSRYSLVELSPKTGR
                     KHQLRRHLKHLFHPIMGDSKYGDLHQNRALVEKSGVSRLMLHAHKLQFQHPKNLQKIE
                     IIASLDEQWQRLFAFFDWNFTQYY"
     gene            17481..17645
                     /locus_tag="PXB09_000825"
     CDS             17481..17645
                     /locus_tag="PXB09_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDL5232963.1"
                     /translation="MDNSLLSLTHEQQQAAVEEIQKLMAQGISAGEAIQIIANQLRDK
                     YQILEKSNNE"
     gene            17638..18114
                     /locus_tag="PXB09_000826"
     CDS             17638..18114
                     /locus_tag="PXB09_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5232964.1"
                     /translation="MNKLWTVLALTITSHYSFAAAEKIVTKDLPAEGKPAVVLQVFDE
                     SEKIAKPIKGNKLFISKKQTRLCWHSINLPVQNKVTIAEAFYAPAAMKLASPGSKINS
                     SADKKNHTIITEINLANNQVLNRCWGFDKTDPVGKYKMEIQINDHIFKGLEFEIVK"
     gene            complement(18151..19002)
                     /locus_tag="PXB09_000827"
     CDS             complement(18151..19002)
                     /locus_tag="PXB09_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDL5232965.1"
                     /translation="MENQKQAEIELKIMLEQQNVALVENYLNQTSPFPVLAHQTELLG
                     NTYYDTPEQFFATQKMGLRVRSVNQQYEITLKTQGEIVGGLHIRPEYNLALPNSQPDF
                     QTLVEKYQLPFENSEQIAESLQAIFSTDFTRKTWLVQVGMSDIEVALDQGIIKNHFGE
                     EPICELEFEIKQGNLGDLFTLVEAMPKADGMWLSNLSKAQRGYLLGQAVKWEQKIATA
                     MDGENSEKLTQLLADFICVGNESLEVLVRFNQCTQQQFSNWQQARAFVKSKDYLLHNL
                     TNLKTMI"
     gene            19063..20472
                     /locus_tag="PXB09_000828"
     CDS             19063..20472
                     /locus_tag="PXB09_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDL5232966.1"
                     /translation="MFSKIHHKLNNFVQRGLDNHLRLAVTGLSRSGKTAFITSLVDQL
                     LHINKGGNSHLNLFAPARHGQILSVKRVEQGDLTIPRFEYDKNRQSLENQPPQWPEST
                     TGISEIRLAIRYQRQHSLLRHIKETGTLYLDIFDYPGEWLLDLPLLSLSYKEWSQTQQ
                     TIHKDERAELATPWLQAVKKLDLFAKTDENLLAEFSQQYTDYLLACKAQGMQYIQPGR
                     FVLPTENAKGAPVFQFFPLLDLSEAEWEKLEQSDRNSIFHTLKKRYEHYQKKIVKPFY
                     EDYFSQFDRQVILADCLTPLNYGYNEFMEMKLGLQQLFKHFHYGNRSLFHRLFSSNID
                     KLLFIATKADHITSDQVPNLESLMRQLVQEGGRHAEFDGIETGYLAISSIQATDAVKV
                     TQQDKIIKAIRGIRSSDRKQVTLYPGSVPNRIPDKNYWQFNRFEFDQFEPKQLDYSQA
                     IPHFRMDSVLQFLLADMFE"
     gene            20518..20868
                     /locus_tag="PXB09_000829"
     CDS             20518..20868
                     /locus_tag="PXB09_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5232967.1"
                     /translation="MNTVISQRKPIHWVGSTLDDIREFPDNIKRELGFDLDLVQQGLL
                     PRDFKAMANLGSGVMEIRVKDPSGAFRLVYLAKFKDAIYCLHAFQKKTQKTAPKDIAV
                     IKARYAAVKELENE"
     gene            20861..21184
                     /locus_tag="PXB09_000830"
     CDS             20861..21184
                     /locus_tag="PXB09_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5232968.1"
                     /translation="MNNIDTKIRHTTEAQGNVFEDLGFPIDEAQKLKSASQQLIETKL
                     MLMNEMSNWIDKNNLKQSEAASILGVSRPRISDMVNGKLEKFTLDTLVTFVAKTGKTI
                     QLQLS"
     gene            21292..21771
                     /gene="smpB"
                     /locus_tag="PXB09_000831"
     CDS             21292..21771
                     /gene="smpB"
                     /locus_tag="PXB09_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDL5232969.1"
                     /translation="MAKKPKVASNTIALNKRARHEYFIEDEIEAGLELQGWEVKALRA
                     GKGNISDSYVIFRHGEAFLFGAMITPLNMASTHIVSDPTRTRKLLLNKRELDSLFGKV
                     NREGYTIVATSMYWKNAWVKVKIGLAKGKKLHDKREDIKDREWQVAKQRIMKNANRG"
     gene            21974..23281
                     /gene="serS"
                     /locus_tag="PXB09_000832"
     CDS             21974..23281
                     /gene="serS"
                     /locus_tag="PXB09_000832"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDL5232970.1"
                     /translation="MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVK
                     TETLQAERNTRSKNIGAAKARGEDISALLAEVDSMGNELDTAKVELDKVQAEIRELLL
                     SVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA
                     SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDL
                     FHTQPLTGQDPNEVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAG
                     SYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCT
                     GDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTL
                     NGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA"
BASE COUNT         7337 a         4762 c         4669 g         6698 t
ORIGIN      
        1 taaatcgtat tgaacaagaa cttgcagact taggcattac aaatgtaaaa gaaatcgtgc
       61 gtaaccctag ctatgagcaa ctgtttgaag aagagatgaa atcggatctt aaaggttatg
      121 aaaaaggcgt cctaacaaat ttaggcgcag tagcggtaga taccggcatt ttcacggggc
      181 gttcgccgaa agataaatat atcgtattag atgaaacgac aaaagatacc gtctggtgga
      241 catctgatgc agctaaaaat gataataaac cgatgactca atctacttgg caaagtttaa
      301 aaaccttagt gaccgatgag ttatctaata agcgtttatt tattattgat gctttctgtg
      361 gtgcaagccc tgagcatcgc atcaatgtgc gtattattac ccaagttgcg tggcaagctc
      421 actttgtgaa aaatatgttt attcgtccaa cagaagaaga attaaaagat ttcaaaccgg
      481 attttgtggt aatgaacggt tcccaagtaa ctaacccgaa ctggaaagag caaggcttaa
      541 attcagaaaa ctttgtggca tttaatatca cagaaggtgt tcagatcatt ggcggtactt
      601 ggtacggtgg tgagatgaaa aaaggtatgt tctctatgat gaactacttc ttaccattaa
      661 aaggtgtcgc ttcaatgcac tgttcagcca atgtgggcga agaaggtgat gtggcggttt
      721 tctttggttt atcaggaacc ggtaaaacga cactatcaac cgatccgaaa cgcaaattga
      781 ttggtgacga tgaacacggt tgggacgaaa acggcgtatt taactatgaa ggtggttgct
      841 atgcgaaaac catcaacctt tctattgaaa acgagccgga tatttatcgt gcaatccgcc
      901 gtgatgcgtt attagaaaac gtggttgtgc gtgaagatgg cactattgat tttgatgata
      961 aatcaaaaac agaaaatacc cgtgtgagct atccgattta tcatattgat aatattgccg
     1021 tgccgtcaaa agcaggacac gctaaaaaag tgattttctt aacggcagat gcattcggcg
     1081 tattgccacc ggtgtctaaa ttaacgcctg aacaaactaa atactacttc ttatcaggct
     1141 ttaccgcaaa attagcaggt acagagcgtg gtattactga gccaacccca actttctctg
     1201 cttgtttcgg tgcggcgttc ttatcactcc acccgacaca atatgctgaa gtgttagtga
     1261 aacgtatgga agcagccggt gcggaagcct atttagtgaa taccggttgg aacggcacag
     1321 gtaaacgtat ttcgattaaa gatacacggg gtattattga tgccatctta gacggctcaa
     1381 ttgagaaagc ggaaatgagt acattaccaa tcttcaattt agcaattcca actgcgttac
     1441 cgggtgtaga aacccacatt ttagaccctc gtaacactta tgaagacaaa gcacaatggc
     1501 aagctaaagc agaagattta gctggcagat ttgtgaaaaa ctttgaaaaa tatgcgacca
     1561 acgaggaagg caaagcatta attgctgctg gtccgaagtt ataagttgta attataagtt
     1621 ataatcgcta aaaaattagt ttaggactaa accttgaatg aggtttagtc cttttgtata
     1681 aaggagaagt acaataatga caacattcca attaaggctg aaagccaaag atgagcttac
     1741 cccacaccca acagcacaat attggcgaaa atgccaagtg gaaggactat ttgatctgcc
     1801 gtttatggat ttagtgttta gagcggcaca agttcaccgt gaaaattttg atgctaatgc
     1861 gatccagctt tcaacgttac tctcaattaa aacaggaggc tgtccggaag attgcgaata
     1921 ttgcccccaa tctgcccgct atgatacggg aatagaaaag caaacaatgc ttgatgtaga
     1981 gacgattgta gaaaaagcta aaattgccaa agagcgtgga gcaagccgct tttgtatggg
     2041 ggctgcgtgg cgaggaccta ggcctaaaga tattaaagta gtctcagaaa tcatcaatgc
     2101 ggtgaaatca ttggggctag aaacctgtgg tactttcggt atgcttgaag agggaatggc
     2161 agaagaatta aagcaagcag ggctggatta ctacaaccat aatttagata ccgaccctga
     2221 acgctataac aaaattatcc atacccgaaa tcacgaagat cgaatggaca ctttaggtaa
     2281 agttcgcaat gccggcttga aagtttgctg tggcggtatt gtgggaatga acgaaacccg
     2341 ccccgagcga gcaggcctaa ttgcaagcct cgctaacctc gatcctcaac ctgaaagcgt
     2401 accgattaat cagttgatta aagtagaagg tacaccgctt accaatgccg aagatttaga
     2461 ctggacagaa tttgttcgta ccattgcggt agcaagaatt actatgcctc aaagctttgt
     2521 ccgactttct gctggcagaa ctactatgcc ggaggcaatg caagccctct gttttatggc
     2581 aggagcaaat tctattttct atggcgataa attacttact acagaaaatc cggaagaaga
     2641 tcatgatcgc caattaatgg ataaattaga tttatatccg ctacaatata tagcctgagt
     2701 gccaatgatt ttcgcctgaa tgaaaattaa agaatcaatc gttattttac gcaaatttct
     2761 aacataaaat aaccgcttgc aaaattcgtt cttgtcttat ttttaaattt atctataatg
     2821 tgaggcctta cgcaagcttg cgtaattcga tggggcgtta ttggttcctc gcaatggtgt
     2881 tcagcttact tgatcaggtt cggaagaaag cagtctgggt tgaaatttcc gtgtgccgag
     2941 ggaggctggt aatgccccac ccttttttca gttctatcag gagaacgtta tgctccagat
     3001 cacccccatt ccggcattaa aagataatta catttgggca atccgtaacg ggcaagatgt
     3061 gattattatt gatccatcag aacatcagcc agcattaaac tttattgcaa aaaatgcgtt
     3121 aaatttaacc gctatcttga ttacccataa tcaccacgac catactgatg gggtgagtgg
     3181 tattgttgag caatatccga atatccctgt ttatggtccg caagaagtgg ctgaatttgc
     3241 caatgtgatt gtctcgcctg aacaacatat cagcctgttt ggttatgatg taaggattat
     3301 tgaaagtggt gggcataccg cagggcatat cagttattta tttggctatg attatctgtt
     3361 ttgtggcgat gcgttattct ccggcggttg cgggcgggtt ttcaccggtg attaccaagc
     3421 ccaatttgat gcgttacaac gctttaaaaa tctgcctaac tcggttaaag cctacccggc
     3481 tcacgaatac accaagagca atttgaaatt tgcagaagcg gttctaccac caagctgtgt
     3541 attatcggaa tatcaagaac aggttgatct tttacgttcg caaaacaaac cgactttgcc
     3601 aaccactatt ggcttggaaa tgcaggtgaa cccgtttatg caagcggtcg atttagccga
     3661 atttattgca cttcgtcagc aaaaagacaa tttttaacct catatttcta attaagcatt
     3721 aaagcctctc actttaatgc tttttggtta aataaaacct ttgcaaacat cgcttgtcaa
     3781 ttccactctg gcttatccta tggtatagtt acgactattt ttagcttaat ttattatttt
     3841 agtgagtaaa attctgtgaa cttcgatcct caaaatatgc ctaagcacgt tgccattatt
     3901 atggatggca atggcagatg ggctaagcag aaaggaaaat tacgcatttt tggtcatcag
     3961 aatggtgtaa aggcagttcg ttctgcagtt agttttgcag caaagcatca tatccaagtt
     4021 ttaaccctct acgcatttag cagtgagaat tggagcagac cagaaactga agtttcagct
     4081 ttaatgtctc tgtttatgaa agctttagat tctgaagtta aacaattaca taaaaataat
     4141 attcgcttaa agattatagg cgataaatcc gcctttagcg aaaatttaca aaaacgcatt
     4201 gccgaatcgg aaaaattaac cgaaaacaat actgggctaa tcttaaacat tgctgccaac
     4261 tatggtggtt actgggatat tgttcaagct gctcaacaac tagcagtgca cgttaaatct
     4321 gaacaacttg ctgtggagca gattacacca gcattgtttc aacaacattt agtgacagaa
     4381 aaccagccgc aagtggattt attaattcga accagtggtg agcagcggat cagcaatttt
     4441 ctattatggc aaattgctta tgccgagctg ttttttagcc cggttttatg gcctgatttt
     4501 aatgatgagg cttttagtga tgcaatttat gcttatcagc aacgtgaacg ccgattcggt
     4561 ggttgttaat ataaaaagaa taaggaaata caatgcttaa agaacgtgta ctttcagcga
     4621 ttattatgat tattgccgtg ctggctgcca tattttggct ctcaccactt cctttaactt
     4681 tagtgttatc ggcaattgtt gtggctgcaa tgtgggaatg ggctcaattt gccggcttta
     4741 aacaccctgt gccacgtgca attgtggcaa tggtgacaat ctgcttatta ctttttgcga
     4801 tcgttgcgaa tactgattat atccgagcca cccgttttat tactgatgag actaccccta
     4861 tcctctttat tggctgtatt tggtggttaa ttgcccttgt cctagtggca acttacccca
     4921 actcggcaaa actgtgggaa aaatctgttg cagctaaatt cctatttgga cttgctacct
     4981 tagtgccgtt tttaattggc acgctcgcat tgcgtttcca taattatgca tttgatccat
     5041 accaaggaac ttatttattc ctttacgtct gtttattagt ttggggagct gattcaggtg
     5101 cttattttgc tggcagagcc tttggcaaaa gaaaacttgc cccaaaagta tctccgggta
     5161 aatcgtggga aggcgtaatt ggtggcgtac tcacctctag tttgattgcc tttacctttt
     5221 tacaacttac accggcaaat gtattcggca aagcattagc cactacccca tttattttag
     5281 tttcggtcgg tatggttgct atttcagtct taggcgattt ggcagaaagt atgtttaaac
     5341 gccaagcagg cattaaagac agtagccagt taattcctgg gcatggaggt attttagatc
     5401 gtattgatag tttaaccgct gccgttccgt tttttgctac attcttcttt tttgtactat
     5461 agaatatgac gtccatcatt gcatttttta ttttaatttg cgtactggtt tttgtgcatg
     5521 aatacgggca cttttgggct gctcgcaaat gcggggtaaa ggtgatccgt ttttcgatcg
     5581 gatttggtaa agtcttattt aagaaaaaag ataaacaagg aaccgaattt gttttttcac
     5641 ttattcctct gggcggctat gtacaaatgt ggaatgatga aacggatatc aacgctccag
     5701 ctcaacaagc tcttaacaca aaatctgtat tgcaacgtgc atttattatt atagccggtc
     5761 ctgctgcaaa ttttattttt gcgattttgg catactgggt cgtttttatt gccggtattc
     5821 caactgttaa acctgttatt ggggaaattt taccaaacac tatcgcctcc caagcaagaa
     5881 ttcctaccga attggaaatt acaaaaatcg gtcatcaatc tatccaagat tgggaaagtg
     5941 catctttagc actagttggt tttgtgggca ataaaaatgt accgttagag ggaaatatca
     6001 acggcaactc aacacaaaaa tatgaactcg atttatctaa ctggagtatt gactcagcca
     6061 aagaaaaccc attaaccgca ttaggtattc gccccaaaag tgcaaaagtc accgctgaaa
     6121 ttaaacaagt tgtcgaaaat tctcctgcaa gccaagtggg tattcaagca ggtgatcgta
     6181 ttcttcaaat taaccagcag ccatttaatt ggttcaattt agttgaactg gtacaagcag
     6241 gtaaacctat tgaacttaaa attgaacaac gaggtcagat taaagacctt gtcgtccaac
     6301 cagaaaaaaa agacgaacgc tatattatcg gggtaatacc aagttatgag cctcttgcag
     6361 ataaatatcg taccgaatta aaatatgata ttcttaccgc attttataaa agtatcgaaa
     6421 aagtgtggtc tcttacccaa accatactcc aatttatcgg taatttaata agcggtgatt
     6481 tgtccattaa aaatttaggt gggccaattt caatggcaaa aggagccggt gcaacagctg
     6541 aaatcggctt agtttattac cttagtttta tggctctaat cagtgtcaat ttgggggtaa
     6601 tgaacttatt tccactttta cccttagatg gtgggcaact tgttttattg gctgttgaag
     6661 caattcgtgg aaaagcatta tcagaaaaaa tacaactcaa attccaacaa attggatttg
     6721 cattcgtgct gagtttaatg ttattcgcct ttgccaacga tataattcac ttttaacaag
     6781 cggttaaaaa aggtgacttt tttgcaaaaa gcaccctgac atcaaaatcc ataatatgga
     6841 tttaaactat attcttaata attttgcaaa acgatcatag gataatttca atgaaaaaat
     6901 tattactttc ctctctttta attgcaaacg gtgtagttgc tgcacctttc gtagtaaaag
     6961 acattcgtgt tgaaggtgtg caacctacaa caggcgaatc tatcatttca tctattccgg
     7021 ttagagtagg tcaaacagca acggatactg acgtatctaa tgtcgtccgc catctattca
     7081 gccaacaacg ttttgcagat gttcgtgcaa cacgagaagg caatacgctt gtcatcaaag
     7141 tcgctgaaaa accgattatt ggcaaggtag agatcgaagg taaccaagcg attcctaaag
     7201 atgccttaga gcaaaattta aaggcaaact taattaacca aggtgaaatt tttgatgctg
     7261 ccaagcttga agcttttaaa gaaggactaa tcgaacatta tcactctacc ggccgttatg
     7321 aagccaaaat tgacacatct gtttcgaata acaccgaagg tggcgttaat attaagttag
     7381 cgattaatga aggtgaagtt gctaaagcca aaacaattaa gtttgaaggt aataatgcct
     7441 tctctgataa aaaattatta gaaaacttag atattcaacc tgatgtttct tggtggaata
     7501 tttttgaaag tagcaaattc gaacaaaccg cctatcaaaa agacttagaa acattaagag
     7561 atttttattt aaatcgtggc tatgcaaaat ttgctatcca agataccgat gttcaattca
     7621 atgataataa aacggaagtt gcattgacct ataaattaga tgaagggtca cagtaccatg
     7681 tcagtgaaat gcgcattatc ggtaatacag ccaatatgga tagccagctc aacgccctac
     7741 taaaagaatt caagcctggt caattattcc gtaaatcaga ccttacacaa attgaagaag
     7801 agattaaatc tattttaggg gacgcaggtt atggttcagc taaagtagat atttatcctc
     7861 aatttaatga agaaaataaa accgtaaaaa tcagttttgt tgtggatgcc ggtcgtcgta
     7921 tttatgttcg taaaatccgt tttgaaggta atggtgtcac tgcagattca acattacgtc
     7981 gtgaaatgcg ccaacaagaa ggtgcttggc tttccacaaa caaagcttct ctaggtaaag
     8041 ctcgtttaga aagaaccggt ttctatgaaa gtgttgatat gtcaatgcca aatgtagaag
     8101 gtacagccga tcaagttgat gtagtgtata aaattaaaga acgcaatacc ggtagtatta
     8161 actttggtat cgggtacggc acgaaaaacg gtatcagcta tcaagcagga attaaacaag
     8221 ataatttctt aggtatgggg tcaactatca gtctaaatgg tacccgtaat aactacggta
     8281 ccagcgttaa cctaggctat accgaacctt actttactaa agatggtgta agtttaggcg
     8341 gtaatatttt ctatgaagat tatgataact cagacaatga ttcaatggct tcatataaac
     8401 gccaaaccta tggtattaac ggcacattag gcttcccggt aaatgaaaat aactcatact
     8461 acttaggttt aggctatacg cacgataaaa ttaaaaatgc agcacgtgag tacactcgtg
     8521 agaaatatgt aaaatcaatg aactttgagt tcgatccagc tgccgattat tacaaaaaaa
     8581 tcaaagctga tgattttgat ttttctctcg gttggaacta caacagcttg aatagaggct
     8641 atttcccgac tgaaggaact accgcaaaca ttggcggtaa aatcacaatt ccaggctctg
     8701 ataataaata ttaccgagtc agtgcagact ttagaaatta ttacccgtta aaccgtgagc
     8761 acaaatgggt aatttcaacg aaagctagca ttgcttatac taatggattt ggtggtaaag
     8821 aagttccgtt ctatcagctt tatactgccg gaggtattgg tacactaaga ggtttctctt
     8881 acggtgcagt agggcctcaa gcgatttact ataatacaaa atccggcaaa tttgatagca
     8941 tgaataatga tattatcggt ggtaatgcgt tagctgcggc aagcttggaa ttaatcacac
     9001 caacgccatt tgtgagcgaa aaatatcagc acaatgtaag aacctctctc tttgttgatg
     9061 ctgcaagtgc atggaataca aaatggaaga aagatgaata tacgaacttg cctgactatg
     9121 gtgatttcaa acgtttccgt gcttccgccg gtattgcatt ccaatggatg tctccaatcg
     9181 ggccattatc attctcttat gcgaaaccaa ttcgtaaata tgataatgat gatattgaac
     9241 aattccagtt caacattggt agttcattct aattaaccac aagcggttaa taaatgtaaa
     9301 aaatttgcaa cttagccgct tatttcaaaa ctgttcatac aaggaaaaca aatgaaaaaa
     9361 ttatttaaaa tgactggctt agccgtagct ttagcctcta caaccggaat cgcgaatgct
     9421 gcagatacta ttggtttcgt agatccaagc tatgtattac aaaaccaccc tgtattatta
     9481 gatgcttcgg caaaatttga taaattcatg aaagaaagcc aagaaaaatt tgctgctgat
     9541 gaaaaaaaat tagcagatga aaataaaacc ttaacggctg agcgcaataa aattaatgaa
     9601 gatgcgcaaa aattacaaaa tgaacaaaaa aatgtagaag cttctatcaa gaaaaaagtg
     9661 gcagcattag agaaagatgc gcctcgctta cgttcaaaag agattcaagc acgtcaaaat
     9721 gcgattcaaa aagaagcaaa cgcattccaa gctaaagtaa cagcaattca aaaacgtgaa
     9781 gctgattttg caaaaaaagc agaagccttc cagaaacgtg cagatgaatt ccaaaaacgt
     9841 attgaacaag cgaataaaga aaatggtggc attaacccac aagaagcgca aaaacaagcg
     9901 gttgatgaag taaatgcaac cattaaagag atcgcaaaat cgaaaggtta cactttagta
     9961 ttacaaccac aagtagcact ttatgctgaa gatgaaggta aagatattac tgaagcagta
    10021 cttgatgcta ttgttaaaaa acatccggaa attaaaatag aaaaacctgc aactgaagct
    10081 caaccagcta cagaaaaaga aaccaaagct gaagaaacta aaccagaaga agcgaaaaaa
    10141 taatggcaaa tttccgttta attgatttag cggagcatat cggcggtact cttaggggta
    10201 acgccgattt ggctattcaa agtattgctg ctttagataa agccgacagc tcgcaaatta
    10261 cctttatctc aaatgcaaaa tatcgggaaa atttgaccgc ttgcaatgct ggagctatta
    10321 tcgtcagccc ggcagatgta gaattttgcc gagcagatca aaatcttatc atcgttgcca
    10381 atccgtatgt tgcttatgct caactggctc aatatatgga ttctactccg aaagcagcga
    10441 gcgaaatcca cccaagtgcg gtgatttcac ctgaagctaa actgggtaat aacgtatcgg
    10501 taggggcaaa tgccgtgatt gaaagtggcg tagaattggg cgatgatgcc gtgatcggtg
    10561 caggctgttt tgtgggaaaa aacagtaaaa tcggggcaag aacccaactt tgggcaaatg
    10621 tttcggtgta ccacaatgta caaatcggag ctgattgctt gattcaatcc tcaacggtta
    10681 tcgggagtga tgggtttggc tatgcgaatg acaaagggca atggattaaa atcccacaaa
    10741 ccggtggtgt gattatcggt aatcgtgttg aaattggtgc ttgcacttgt attgaccgag
    10801 gtgcattaga tccaaccgta atcgaagata atgtgattat tgataacctt tgccaaatcg
    10861 cccataatgt acacattggt tttggcactg ccgttgccgg cggcgtcatt atggcaggca
    10921 gtctaaaagt tggtcgcttt tgccaaattg gtggagcaag tgttatcaac ggtcatatgg
    10981 aaatctgtga tggtgccata attaccggaa tgggtatggt tatgcgccca attacagaaa
    11041 aaggaattta ctcatcaggt attccattac aaaccaataa agaatggcga aaaaccgcag
    11101 cacttgtaat gaatattgat gaaatgaaca aacgcttaaa atcgttagaa aaacgtttta
    11161 acgattaatt ttattagagg tcttaaagtg acagaaatga caactgaaaa tcgtgagcca
    11221 aatattattg aagtaaccga aattatggat atgttaccgc atcgctaccc tttcctgtta
    11281 gttgatcgcg taaccgatta tgaagaaggg aaatggttaa aagccattaa aaatgtaacc
    11341 ttcaatgaac cttgttttac cgggcatttt cctggcgcac caatcttccc aggagtattg
    11401 attctggaag caatggctca agcaactggc gtattagccg ttgccactta tggtaagtta
    11461 agtgaagacg aactctacta ttttgccgca attgacaatg ctcgctttaa gcgaccggtt
    11521 gtgccgggcg atcaacttca acttgaggtt gaatttctta aagaagtacg tggtattact
    11581 aaatttaccg gtaaagcata cgttgatggc aaattagtct gtgaagcaga tttaatgtgc
    11641 gctcgccgta aataattcga tataagccca aactagaggg aacaaactat gcgtctaatt
    11701 gattcaacag caaaaattag cccgcttgcc atcattgaag aaggtgctga aattggcgct
    11761 cacgttgaaa ttggtccatt ttcagtcatc ggtaaagatg tcaaaatcgg ggctagaacg
    11821 aaaattcact caaatgttgt cattaacggc atgactgaaa ttggtgaaga taaccatatt
    11881 ttccaatttg ccagcattgg tgaaatcaac caagatctaa aataccaagg tgaaccaacc
    11941 aaagtggtga tcggtaatcg taaccgtatt cgtgaaagtg ttactattca ccgaggtacg
    12001 gtacaaggcg gtggcgtgac gaaaatcggt gatgataact tatttatgat caacacccac
    12061 atcgcacacg actgctctat cggtaaccgt tgtattatcg ccaataatgg tacgctagca
    12121 ggtcacgtta ccctagatga tttcgtgatt gtgggaggaa tgtccgccat tcaccaattc
    12181 gttgtgattg gttcacacgt tatgcttgga ggcggttcaa tggtcagcca agacgtaccg
    12241 ccttatgtca tggcacaagg taaccacgca cgcccatttg gtattaactt tgaagggtta
    12301 aaacgtcgtg gctttgataa accaactatg cacgctattc gcaaagtcta taaactgatt
    12361 tactccagcg gaaaaacatt ggaagagtgc ctagtagaaa ttgagcaaat tgcagcaaca
    12421 gaacctgcga ttgctatttt taaacaattc ttcaaacgtt ctacccgtgg tattattcgt
    12481 taataaacga aaccccgaaa tcaattcggg gtttgtttta tcaagcgacc gtcgaacctt
    12541 tcaacaattt tcgaatccaa gctcgatttg ggctaaggtt atgccaaata tcctcactga
    12601 ttggcacagg ctcattcaca atcaggcttg ctaacaattc ccctagaagt ggtgcagtcg
    12661 tcaaacctcg agaagacagg ccgtttacca tatacagatt ggtaaaaatt tcagcatttt
    12721 ctaccgcttg tttccgtctc aactggttgt ataaattggc atattggctt ttttgctgct
    12781 caaaatgatg cactgcccca accatcggta cacgatcacg aaacgccgca cgaataccga
    12841 ctttggcttt attttcagat aaatcaattc cttgcgtcca ctcacaaacg gttacatttt
    12901 gctgaagttt tgcaacattc tcccaatgct ccgataaact aaactcggtt tctgcattat
    12961 cccgaatatg gcttgctcca atgcaatgcg tgccataggc tgacattggc gttaaataac
    13021 catcataaca aagcacacac ttcagttttt gtaattcgct tgtagtcgga atttggctca
    13081 cttgccctcg taccggatac aacggaatgc cgttcgcttg gctaaattca ttcaacgtat
    13141 gtccatttgc cagcacaacc gcttgatgtc gaaccgtttc tcccctcgtc tgccattgcc
    13201 acattccatt agaaaaggtt aaatgctcaa ctttgtgatt cagtacaatc ttcaaccctt
    13261 tctgctccag ccaagtaaag ccatttctaa caagttgtac cggtgaaagc caaccagctt
    13321 gcggaataaa tgccccgctg tttggcacgc ttaaacctaa tttttcactt aattctgcct
    13381 gtgaacaaga ttttaataag gtgtcatcag ccgtctgctc caccattttt tccagttttt
    13441 tagccgtttt ctcgtcatag gcgtaaagca ctaccccgct taaattatgc tcaaactcaa
    13501 tgttggattt cagttgttgc aagcgttgca atgcataatc aaaactatgg atataaaact
    13561 gtacatttcg ctcgtcatca tcgcttaact gtgggtaaat cgccccttgt aaatttcctg
    13621 aagcatttat tgccaaggtt tcatctttgc aatacagcgt gacttgcttg cctttttcta
    13681 acagcgataa cgcaacgaag aaactcgcta ctccgccacc aataattgca atgtcatcag
    13741 cggtttcatt tttggcataa aaataggggt aattaggctc ggaaacttgg ctatctaacg
    13801 gtttctcgcc ccaaagcatt tctcgttttt tgccaaatcc tttgcgtttt ttcactgcaa
    13861 aacctgcggc ttccagccct cgtctgacca tacttgaagc ggtaaaagta gcaaaactgc
    13921 cgccattggc acttagtcga aacatttgca gatataactg ttcgttccac atttctgggt
    13981 ttttatcagg cgaaaagcca tctaaaaacc aagcgtcaat cgtgccgcta taaagatcgc
    14041 ctaattgggg taagttttca gcaatctcac cgaaccataa atctaaataa acctgctcaa
    14101 aatgataacg ttggcaacct atttggcgag gctgccaaca agcggttaaa ttttcagata
    14161 atgttgcaaa ttgcggatag cgttggtgaa tatcagctaa ttggctggcc gtcagaggaa
    14221 atttctcaaa tgagataaaa tagagtcgtt ttagtttact ttgcggaaat gctgcccgaa
    14281 actgttggaa tttgtcagca acggctaaaa aattcaagcc cgtgccaaag ccggtttccg
    14341 caataacaaa agcctctttc gggtgagatt gccacttttc ccacagttgg ttaccttctt
    14401 gaaacacata gtaactttcc gccaaaccat cttgggtaga aaaataaata tcatcaaatt
    14461 gctccgacac cggtgtatct gcatcattaa atgtaagtgt cgcaaaagtc agtttaccca
    14521 tcatatcccc ttaaaaacaa aacacggaaa accccaagat tttccgtgtt tcaaccagtt
    14581 caatagtacc aatgttagaa aatgttgctg gcaaaaataa cgatcatacc aagtgcgcct
    14641 acaaccgtta gcattgaata accaaaagta cccattttac aatcctcatt gttaattatg
    14701 attaaaacgg ctttattcta gcataatttc catcgctttg aatgcctatg cttgaataat
    14761 tttgccaaaa caagcggtca atttttgtaa atcttttacg cctttggcac tttccacgcc
    14821 agaatttaaa tctaacccga cacagccttg agcaagggct tgctcaatat tctcagtgcc
    14881 aataccacct gccaataacg ctttttgttt taaggtttct ggaatcaacg cccaattaaa
    14941 ggttttgcct gtgccgcctt gctgattgcc tactttgctg tctaatacat aacgagcaat
    15001 ctgtggatta tcgttaaatt ctagattttc aacctcaaca tcaaccgata aggctttcca
    15061 gatttgagtt ttactaccta atttctctgc cagttctgca atgtattgct catcttccga
    15121 gccgtgcaat tgaactgcaa ataactcaag ctgttttgcc attttttcca caaattcgac
    15181 cgcttgattt tggaacaccc ccacataacg caacggtgca ttcaccacca attcttgggc
    15241 ttggcgaagt gaaagctggc gaggcgagcc ttcggcaaaa attaaaccgc catataatgc
    15301 cccttgctca taaaccgctt tcacatcttg cacacgggtt aagccacaca ctttgttttc
    15361 accaaaaatc accgcccgca ccgcattatt gagatcggca cttcccatta aactgctgcc
    15421 gattaaaaaa gcatgaacat acggcttaat gtttttcact tgctggtgat cgttaatacc
    15481 cgattctgaa atcaaacaga catcagccga aatttgggct tggtattttt ccaccaaacg
    15541 cacaatgcgg ttcatatcaa tcgtgagcgt gtgcaaatca cggttattaa cgccaattac
    15601 cttcgcccct aaggctaagg cacgttcaaa ttccgcctcc gtgctggttt cagtcaaaac
    15661 gcccattcct aactcgtgag ccagtgtggc aagttcacgg taggtttcat catttaccac
    15721 cgataacatc aataaaatcg catcagcatt ataaaaacgg gcaaggtaaa cctggtatgc
    15781 cgaaatcata aaatctttac acaaaatcgg ctgtgtggtt tggcgtttga cttgatcgat
    15841 ataacggaaa tcgccttgaa aatattgctc atcggttaaa accgaaatcg ccgcagcgta
    15901 atttttatac acttgggcaa tactgtctaa atcgaactca gcacgaatta acccttttga
    15961 cggtgaagct tttttacatt ctaaaatata agctggttct tggtgtgtgc ctttggcaag
    16021 agccgcatag aaatcatggt cgctttttac aattttgtgc tgaaattcac ttaacggaaa
    16081 ggcttgctct ttttgtgcca cccaaatggc tttatcttgt acgatctttt gtaaaatcgt
    16141 cggttggttt ggttgagcgt tatcttgaac gatgttttgc atataaattc ctagagcgaa
    16201 atcggtttga atggtaaaat ctgcccttat ttttacccga aaaagtctca tttcacaagc
    16261 aaaactaaga tgaaatcaca agttatacag catttatctt atttagaaat cgccctgaga
    16321 gttaatcaac tttgggaggc gacaccacca agccctgaag ccttagccaa tgagcaacct
    16381 ttctgcgtgg aaaccttaac cccaacccaa tggctacaat ggatttttat tcccagaatg
    16441 cgggccattt tagatgcaaa tgccgattta cctcgcaatt ttgcaatcac cccttattta
    16501 gaagaggcat tgaaaaacga aggttattta caagcgattt gtgaaccgct attaggtttg
    16561 gaaaagttgt tgaaagatta acttctctct cagttctttt attaatctga caaattcgtt
    16621 gatagtgcca gcgtccacgc tggtactaat tttaacggtt aattaatcaa aatttggcac
    16681 aagcgaggac gcttgcgcca tcatagagat ttgataaatt atacttaatg tattatgacc
    16741 ttagatattt tataccaaga caactcgctt atcgccatca acaaacctgc cggagtgttg
    16801 gtgcatcgtt cttggttaga taaacacgaa acggtgtttg caatgcaaac cctgagggat
    16861 caaatcgggc aacacgtttt tccgattcac cgccttgacc gcccaacctc aggtgtattg
    16921 ctgtttgctc tcaacagcga aaccgcccga ataatgagcg agcagtttga acaacaccta
    16981 gtacaaaaaa cttatttggc ggtggtgcgt ggctatttac aaggttcggc acaaattgat
    17041 tatccgctca aagtgatttt agataaaatt gcggataaat tttctcagga aaaagaggct
    17101 caagcggcga ttactgatta taaaggctta gcaacggttg aaatgcctta ccctgtcggc
    17161 aagcaccaaa cctctcgtta tagtttggtt gaacttagcc ctaaaaccgg gcggaaacat
    17221 cagcttcgcc gccacctgaa acacctgttc cacccgatta tgggagacag caaatatggc
    17281 gacttacacc aaaaccgtgc tttagttgaa aaatcaggcg taagtcgttt aatgttacac
    17341 gcccataaat tgcaatttca gcacccgaaa aatttgcaaa aaatagagat aattgcatcg
    17401 cttgatgagc aatggcaacg cctctttgca ttttttgact ggaactttac tcaatattat
    17461 tagacaaaaa agaggattga atggataatt cacttttatc attgacacac gagcaacaac
    17521 aagccgcagt agaagaaatt caaaaactga tggcacaagg catcagtgcc ggagaggcaa
    17581 ttcaaattat tgctaatcaa ttacgtgaca aatatcaaat attggagaaa tcaaacaatg
    17641 aataaattat ggacagtgct tgccctaaca ataacttccc actatagctt tgctgccgct
    17701 gaaaaaatag tcactaaaga tttaccggca gaaggaaaac ctgcagtcgt gctacaggtt
    17761 tttgatgaaa gtgaaaaaat tgcaaaacct attaagggaa ataagctctt tattagcaaa
    17821 aaacaaacaa ggctttgctg gcacagtatt aatcttcctg tacaaaataa agttactatt
    17881 gcagaagctt tctatgcccc tgctgcaatg aaattagctt ctcccggctc taaaattaat
    17941 tcttctgcag acaagaaaaa tcatactatc attactgaaa taaaccttgc aaataatcaa
    18001 gtattaaatc gttgctgggg ttttgataaa actgaccctg tcggtaaata caaaatggaa
    18061 attcaaatta acgatcacat tttcaaaggt ttagaatttg aaattgtaaa ataacctaaa
    18121 agccacagag taacaccctg tggctttttg ctaaatcatt gtttttaaat tggttaaatt
    18181 gtgcagcaaa taatctttac tcttcacaaa ggctctcgcc tgttgccagt tgctaaattg
    18241 ttgctgagtg cattgattaa aacgtaccag cacttccaaa ctttcattgc cgacacaaat
    18301 aaaatcagct aataattggg ttaatttttc actgttttca ccatccattg cagttgcaat
    18361 tttctgctcc catttaaccg cttgtccgag caaataaccc cgctgggctt tgcttaaatt
    18421 actcaaccac atcccatccg cttttggcat tgcctcaacc aaagtaaata agtcgcctag
    18481 atttccttgc ttgatttcaa actccaattc acaaatcggc tcttcaccaa aatgattttt
    18541 aatgatgccc tgatctaacg ctacctcaat gtcagacatc cccacttgca ccaaccaagt
    18601 tttacgagtg aaatcggtgc tgaatatcgc ttgcaagctt tctgcaatct gctctgaatt
    18661 ttcaaacggc aactggtatt tttccactaa tgtttgaaaa tccggctggc tattgggtaa
    18721 agctaaatta tattccggac gaatatgcaa accgcctaca atttcccctt gtgtttttaa
    18781 cgtgatttca tattgttgat tcacagaacg cacccgcagc cccatttttt gcgtggcaaa
    18841 aaattgctcg ggcgtatcat aataggtgtt gcctaacaat tccgtttgat gagcaagcac
    18901 agggaatggc gaggtttgat tcaagtagtt ttccactaac gccacattct gctgttccaa
    18961 cattattttc agttcgattt ctgcttgttt ttggttttcc atttcacacg cccctgcaac
    19021 gttgtataat caagcggtta ttttatcaat aaattttgca aaatgttttc aaaaattcac
    19081 cataaactga ataactttgt ccagcgtgga ctcgacaacc atttacgcct cgccgttacc
    19141 ggcttaagcc gtagtggcaa aacggcattt attaccagct tggttgatca gcttttgcat
    19201 atcaacaaag gcggtaattc gcatttaaac ctgtttgcgc ctgcacgcca cgggcaaatt
    19261 ctatcggtaa aacgcgttga gcaaggggat ttaactattc cccgctttga atatgataaa
    19321 aaccgccaaa gccttgaaaa tcaaccacct caatggcctg aatccaccac tggcattagc
    19381 gaaattcgcc ttgcgattcg ctaccagcgg caacattctc tgctacgtca tattaaagaa
    19441 accggcacgc tttatttgga tattttcgat tacccgggcg aatggctgtt agatttaccc
    19501 ctgctctccc tttcctataa agaatggtcg caaacgcaac aaaccataca taaagatgag
    19561 cgtgcagagc ttgccacacc ttggttacaa gcggttaaaa aactcgatct ttttgcaaaa
    19621 accgatgaaa atttactggc agaattcagc caacaataca ccgattattt gctcgcctgc
    19681 aaagctcaag gaatgcaata tattcagccg gggcgatttg tgttgccaac tgaaaatgcc
    19741 aaaggtgcac cggtattcca attttttccg ttattagatt taagcgaagc tgagtgggaa
    19801 aagttggaac aaagcgacag aaacagtatt ttccataccc tcaaaaaacg ctatgagcat
    19861 taccagaaaa aaatcgtcaa accgttttat gaagattact tctctcaatt tgaccgccaa
    19921 gtgattttgg cagactgcct cacaccgtta aattatggct ataacgaatt tatggaaatg
    19981 aaattagggt tacagcaact gtttaaacat ttccattatg gcaatcgttc gctatttcac
    20041 cgtctgtttt cgtccaacat tgataaattg ctatttatcg caacaaaggc agatcacatt
    20101 actagcgacc aagtgccgaa tttggaaagc ctaatgcgac aattagtgca agaaggggga
    20161 agacacgcag aatttgatgg tatcgaaacc ggctatttag ccatttcctc gattcaagca
    20221 accgatgcgg tgaaagtgac tcagcaagat aaaatcatta aagcgataag agggatccgt
    20281 tccagcgata gaaaacaagt gacactctac cctggcagcg tgccaaatcg catacccgat
    20341 aaaaattact ggcaatttaa ccgttttgaa ttcgaccaat tcgagcccaa gcaacttgat
    20401 tatagccaag cgattccaca cttcagaatg gattcggtgc tacaattttt attggcggat
    20461 atgtttgagt aaaatcttgt tgcatatttc cattaaaggt ataaaatttt atacattatg
    20521 aatactgtaa tttcccaacg aaaaccaatt cactgggttg gatcaacctt agatgatatt
    20581 cgtgaatttc cggataacat taaaagagaa ctcggttttg atcttgattt agttcagcaa
    20641 ggcttattac cgagggattt taaagcgatg gcaaatttgg gttcaggcgt aatggaaatt
    20701 cgagtaaaag atccctcagg ggcttttcgc ttagtgtatt tagctaaatt taaagatgca
    20761 atttactgtt tacacgcttt ccaaaagaaa acgcaaaaaa cagcccctaa agacattgct
    20821 gtcattaaag cacgctatgc tgccgtaaag gagttagaaa atgaataata ttgatactaa
    20881 aattcgccat actacagaag ctcagggtaa tgtttttgaa gatcttggtt tccctattga
    20941 tgaagctcaa aaattgaaat ctgccagtca gcaactgatt gaaactaaac tgatgctaat
    21001 gaatgaaatg agcaactgga ttgataaaaa taatctcaaa caatcagaag cggcttctat
    21061 tctaggtgtt agccgccctc gaatttctga tatggtcaat ggcaagttag aaaagtttac
    21121 cctagatacc ttagtcactt ttgttgcaaa aaccggcaaa acaatccaat tgcaattatc
    21181 ctgatatttg caaaatttta ctcaaattca accgcttgtt gcttttatca ttcactaaca
    21241 aggttatttc aagtaaaatt gtgactaatt ttttattaat aaacacaaat tatggcaaaa
    21301 aaacctaaag ttgcatcaaa tacgattgcg ttaaataaac gtgccagaca cgaatatttc
    21361 attgaagatg aaattgaagc cggcttagag ctacagggct gggaagtcaa agcattgcgt
    21421 gccggaaaag gcaatatcag cgatagctat gtcatctttc gccacggcga agccttctta
    21481 ttcggggcaa tgattacgcc tttgaatatg gcatcaaccc atattgtcag cgacccgacc
    21541 cgcacccgca aacttctact gaataaacgt gagttagact cactgttcgg taaagttaat
    21601 cgtgaaggtt ataccattgt tgccacctca atgtattgga aaaatgcgtg ggtgaaagta
    21661 aaaatcggct tagccaaagg gaaaaaactg cacgataaac gtgaagatat taaagaccgt
    21721 gaatggcaag tggctaaaca gcgtattatg aaaaacgcca atcgtggcta aatgaataat
    21781 taccctctcc ccttgtggga gagggacaga aaaattgcgt tcagcaattt ttcagggaaa
    21841 gggggatttg taaaagttca aggaaaaaca acgcttgccc tctctctgaa aaatatttct
    21901 gaacgaaata tttttcggtc tctctcccat aaagggagag agtgaaacac aaatttaaac
    21961 taaggaacat acaatgatcg accaaaacct acttcgtacc aatttagaag acgttgctac
    22021 agctcttaaa atcaaacgta attttatttt agatgtagag cgagtaaaaa cccttgaaga
    22081 acagcgtaaa acgctacaag ttaaaaccga aaccttacaa gcagaacgca acactcgctc
    22141 caaaaacatc ggtgcggcaa aagctcgtgg cgaagatatt tcagctttat tagccgaagt
    22201 agattcaatg ggcaacgaat tagacacggc aaaagtagaa ttggataaag tacaggcaga
    22261 aatccgtgag ttgttgcttt ctgtgccaaa cttaccggca gatgaagtac cactcggtaa
    22321 agacgatagc gaaaacttag aagtattacg ttggggcgaa ccacgtcaat tcgactttga
    22381 agttcaagat cacgttaccc ttggcgaaaa cttaaacggt ttagattttg ctgccggtgt
    22441 aaaattaacc gccagccgtt ttgtggtaat gaaaggtaaa cttgcccgct tacaccgtgc
    22501 attatctcaa tttatgttgg atttacacac tgaacaacac ggctatgtgg aaaccaatgt
    22561 gccattttta gtcaatcacg acactctata cggcacaggt cagctaccaa aatttggcga
    22621 agatttattc catactcaac cattaacagg gcaagatcca aacgaggtgc aacgcccatt
    22681 cggtttgatt ccaaccgctg aagtgccagt aacgaactta gtgcgagatg aaatcattga
    22741 tgaagacagc ttaccactgc gttataccgc ccacacccct tgtttccgtg cagaagccgg
    22801 ttcttatggg cgtgatactc gtggtttaat tcgtatgcac caatttgaaa aagtggaaat
    22861 ggtgcaaatt gtcgcccctg aaaaatcaat ggaagcctta gaagaattaa ccggtcacgc
    22921 agaaaaagtc ttacagcttt taggcttgcc ataccgcaaa gtgctactct gcactggtga
    22981 tatgggcttt ggtgcagcaa aaacctacga cttagaagtt tggctaccgg cacaaaacac
    23041 ttaccgtgag atttcttctt gctcaaatat gtgggatttc caagcccgcc gaatgtctgc
    23101 acgttgtaaa gctaaaggcg acaagaaaac tcgcttggtt cacaccttaa acggctcagg
    23161 tttagcggtt ggtcgcacac tggtcgctgt gttagaaaac taccaaaatg ccgatggctc
    23221 tattactgtg cctgaggtgt taagacctta tatgggtggt ttggaagtaa ttaccgctta
    23281 agattaataa atgaaaccaa tctcagaaat ggggttggtt tttttaataa atcttatccc
    23341 taatcttttt caggataatt cataaaaatt tcagtaacta ctcggcggtt ttgcactgta
    23401 tctaaacgaa taggattttt cattctccct aaacgaaatg caataatggt gacttttttc
    23461 ggttca
//
LOCUS       DANLTI010000027        22795 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.027, whole genome shotgun sequence.
ACCESSION   DANLTI010000027 DANLTI010000000
VERSION     DANLTI010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22795
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.027"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            191..859
                     /locus_tag="PXB09_000833"
     CDS             191..859
                     /locus_tag="PXB09_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5232971.1"
                     /translation="MAHNGSGKSTLMRLLSGDITPTSGSILVDGLPLHQLSTKEAAKH
                     IAYLPQRLPEAADFLVQELVALGRFPYQKWLQKPTEFDVQIVEQAMESTSVTQFAKQP
                     VNSLSGGEKQRVWLAMCLAQQTPYLLLDEPLAALDIVYQVEVMQLIRKLVNEQGLTVI
                     IIIHDINLASQFCDEIIALKQGELCIQGSVDEIMQEQKLLEIFGLKLHLFNHPAGLHK
                     VAVL"
     gene            856..1737
                     /locus_tag="PXB09_000834"
     CDS             856..1737
                     /locus_tag="PXB09_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5232972.1"
                     /translation="MMFRQYKRFIFLFILQISTAFAQPNIFTPDWSIASALTEMGNPP
                     IAMGDKRIYPLWSHRPIQPNSVLDIGARYQPNRELLAQLPVELVLSNFFYAHLASVYP
                     KEIPQIDVLFDGGNTEPQQHWHTYQKATRMIGTEIKNPNAAEAYLTKTEQTLAQWGKE
                     ILNSNPDIDYYSVVQFGSPRELRIYASNSMFRVAFDLMGLKQADLGVGDRWGNKLIPV
                     SDLAKLPERTCLIVISPFSKMTQADLENSYIWQRLGFGKNRCMKVLPPVWLFGGADSI
                     SHFAEFLHNAMTQGEKE"
     gene            1737..2552
                     /locus_tag="PXB09_000835"
     CDS             1737..2552
                     /locus_tag="PXB09_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5232973.1"
                     /translation="MKSSFLLIGCILLSLVTAVIRLNMVWEWEWQLLLINVDLLPINQ
                     AAVKAALLPEMTTSFLAGGLLAIASSGLQHIVRNNLASDSTLAVSSGAQLALMIAVIF
                     FPAAELFSSFWIALLGSLAAIVLVLFIAKASKLNPLTLILGGLIVNILFGAIASLLTL
                     FYFDFLFGVMVWGSGSLLQDGWATSITLAITVVVAFFIFVLLSRPLTILSLDDEQARR
                     LGAPVNLLRYLVIFVCAAITALVVSKIGVIGFIGFAVQVWLILPKYDIYYFAS"
     gene            2549..3685
                     /locus_tag="PXB09_000836"
     CDS             2549..3685
                     /locus_tag="PXB09_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5232974.1"
                     /translation="MIAFLAGGFLLFFTNNLIGIVSRIYDTLLPVGAFTATLGAPLLI
                     FLVLRQRKAQFEASNTAYFPVKRLNSWKLPILLLCAGVILFCLLQIIAPTMNGWAISI
                     DENLMSSYRLPRSLSAIATGAMLAVSGSLLQILTRNPMASPEVLGVSSGATIAAVLSF
                     LLFPTLSSISFLLFGVLGSLTVLALIMWLSRKLQPSALMITGVAIGALVSGLMAIIQL
                     SGSPRLTAVISWLSGSTYYANPNTVWILLSVAILLISATLLFIKPLRLISLGETVSYH
                     LGLEVKKVQMIVLLLIALMSAASTLAVGPMSFIGLMTPHLAKNLGAITPEKQIPISAL
                     LGAMLMLIADWLGRYLIFPYEIGAGIIASILGGIYFLLLLKQHK"
     gene            3713..4111
                     /locus_tag="PXB09_000837"
     CDS             3713..4111
                     /locus_tag="PXB09_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5232975.1"
                     /translation="MNTLSKAIKLALYSSGIGFISTAYAETVTHLDTVEVSAETPNAS
                     SEETGRYAQKKAKGSNGMALSAKDTPQSVTAVTHQQIRDQNLNTIAKALEATHGVSVS
                     LLDRGRYSFSARGFGIDKVKVDGMDLKVSK"
     gene            4146..5849
                     /locus_tag="PXB09_000838"
     CDS             4146..5849
                     /locus_tag="PXB09_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5232976.1"
                     /translation="MLYDRVEVVRGATGLTTGAGDPSASVNLVRKRANSISRYTILEA
                     GIGRYADFNTMIDHSQALNNSGSVRGRFIAEHKNGNTFIKNEKERYTTLYGNIEADLT
                     DTTKLGLGVSYQKEKRDAALWGGLPAFYSDGGETNWSRSKNASPEWAYWDNESVNYFA
                     DITQKLGEKWELALKGNYRVGKHNSELFYFSGSSLNRQDGLGWSPWPGKFKNDNTQSN
                     VQLDLTGSFSAWGLEHDAAIGIQYNRAHRNSYAADNSTFDGAFDFNNWNGIYARPNWG
                     SMSEKYYQNLKEFGVYVSTRLHLTDRLSMLLGSRISSYRTEGTFYGSTQNFHANDVWT
                     PYAGLTFDINPQNTVYVSYTDIFKPQSQVDINNKLLSPVTGETYEAGWKGSYFNDNLQ
                     TQISVFETRQDNLAQSAGINPNTLLAYYTASKGAKVRGFEVEASGNVTEKLKLSAGYT
                     QWKGDDASGNPINTTQPRKQFKLFATYDMNRLVQGLTVGAGVNWQSRIYTKHATYGEY
                     GQKAYTLVNLMARYQFNDNFSAQLNIDNLFDKKYRNALSFSQYSYGEPFYTRLNLRYE
                     F"
     gene            5961..6605
                     /gene="adk"
                     /locus_tag="PXB09_000839"
     CDS             5961..6605
                     /gene="adk"
                     /locus_tag="PXB09_000839"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDL5232977.1"
                     /translation="MKVILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKESTE
                     LGKQAKALMDEGKLVPDELTVALVKDRIAQPDCANGFLLDGFPRTIPQADALKESGVK
                     IDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDK
                     PETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKILS"
     gene            complement(6667..7482)
                     /locus_tag="PXB09_000840"
     CDS             complement(6667..7482)
                     /locus_tag="PXB09_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5232978.1"
                     /translation="MSYKVVFSLLFSLFLSTANANWTKINDVNYTWGPFNIYHITLFT
                     ESGTYVEGTRPLMLTLQYKKPWEGRDFAVSLARTWNNLGIKLPEKELDEVITHLRKTF
                     PDIKPEDTLHYIALEDRGYFILNDKVVSDVFNKAFNDAIVAIWLDPKMDISHQLLDPS
                     YKPRAEAESIKPQVEERVAENLQEPIVNTEVSKELKADSQAVEQAPNKIDIPVADKTQ
                     ASVVNEATQPVENKDKKEPEKLEEKPKEMKIENPEVFISPIYDDILMLTKYCV"
     gene            7672..7887
                     /locus_tag="PXB09_000841"
     CDS             7672..7887
                     /locus_tag="PXB09_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDL5232979.1"
                     /translation="MFPEFRDLITQLKQNNSHFARLFDKHNELDQRIKNMEANIELAT
                     HEEVEALKKEKLHLKDQLYAILKQESA"
     gene            complement(7946..9103)
                     /locus_tag="PXB09_000842"
     CDS             complement(7946..9103)
                     /locus_tag="PXB09_000842"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDL5232980.1"
                     /translation="MSLDLADIRTQITNLDRNLLKLLAERHRLAFDVVRSKEITQKPL
                     RDLEREKILLQELVNFAEAENYQLDPQYVTQIFQRIIEDSVLTQQNYLQNKLNAQKEE
                     QVSIAFLGMRGSYSNMASRQFAKKYQGTLAELSCHSFNEVFEKVSLGEADFGVLPLEN
                     TTSGSINEVYDLLQHTDLTLVGELAYPIKHCVLANGTVDLAEVDTIYTHPQPAQQCSQ
                     FLAGLDKVHIKYCESSSHAMQMVARLNKPNIVALGNEDGGKLYGLTNIKTDIANQAHN
                     ITRFIVVAKEAVQVSPQVQTKTLLLMTTTQQAGALVDALMVFKNHHIRMMKLESRPIY
                     GKPWEEMFYVELEANIHSENTQKALAELEQVTSYLKVLGCYPSEIIEPVKL"
     gene            complement(9225..11291)
                     /gene="prlC"
                     /locus_tag="PXB09_000843"
     CDS             complement(9225..11291)
                     /gene="prlC"
                     /locus_tag="PXB09_000843"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDL5232981.1"
                     /translation="MSNPLLNYTGLPAFSQIKPEHIKPAVEAVIKECRETVEKVAQIE
                     NPTWENFYMPQAMAEDKFSRAWSPVGHLNAVKNSPELREAYQACLPLLSEYSTWAGQH
                     QGLYQGYVKLKNSPEFETYSVAQKKAIENSLQDFELSGISLPAEKQKRYGEISARLSE
                     LNSQFSNNVLDATMGWDIVITDEAQLKGLPESALEAAKLSAESKGKKGYRFTLEIPSY
                     LPVMTYCENKALREEMYRAYVTRASDQGPNAGKWDNSAVIDEILKLRHEKAQLLGFKT
                     YSDYSLATKMAENPQQVLDFLNDLAARSKAQGKNELCDLKKFAKAHFGIEHLDLWDIP
                     FYSEKQKQALYSVNDEELRPYFPENRVLSGLFEVIKRIFGMRVEEQKDVDVWHKDVRF
                     FNIFDKNDRLRGSFYLDLYARENKRGGAWMDDCINQKRLADGTLQKPVAYLTCNFNKP
                     IGDKPALFTHDEVTTLFHEFGHGIHHMLTEIDVGDVAGINGVPWDAVELPSQFLENWC
                     WEEEALAFISGHYETGEPLPKAKLEQLLAAKNFQAAMFVLRQLEFGLFDFRLHTEYDP
                     SKQGQVLALLKEVKDQVAVAKGVEWARTPHSFSHIFAGGYAAGYYSYLWAEVLSADAY
                     SRFEEEGIFNPETGQSFLDNILTRGGSEEPMVLFERFRGRKPTLDALLRHKGIVGNAE
                     PVDCTQ"
     gene            complement(11422..12162)
                     /gene="pflA"
                     /locus_tag="PXB09_000844"
     CDS             complement(11422..12162)
                     /gene="pflA"
                     /locus_tag="PXB09_000844"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDL5232982.1"
                     /translation="MSVVGRIHSFESCGTVDGPGIRFILFLQGCLMRCKYCHNRDTWD
                     LDGGKEITVEELMKEVTTYKHFMKATGGGVTASGGEAVLQMEFVRDWFRACKAEGINT
                     CLDTNGFVRHYSPVVDEMLEVTDLVLLDLKQLNDEVHQDLVGVSNKRTLDFARYLHKL
                     NKPTWVRYVVVPGYTDDDDSAHRLGQFIQGMDNIEKVELLPYHRLGAHKWETLGYKYE
                     LEGVMSPPKEDLERIQKIIESYGHTVKF"
     gene            complement(12411..13436)
                     /locus_tag="PXB09_000845"
     CDS             complement(12411..13436)
                     /locus_tag="PXB09_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5232983.1"
                     /translation="MSKQDLIRSSVAEYLTFITATGESQVDAVYADENVWLSQKMMAV
                     LYDVDVRTISYHLKKIFSDNELAENSVIQFFWITAQDGKNYHTKHYNLSAIIAVGYKV
                     NSERAVQFRKWATEIVHSFAIKGFAMDDERLKNDGTILGKKYFEEQLARIREIRLSER
                     KFYQKITDIYATAVDYDRTATATKRFFATVQNKLHWAIHGHTAAELIMARANAEKPNM
                     GLTNWKDAPQGKIYPFDVVVAKNYLSDNELAQLQRLVSAYLDMAEDMAERQIPMTMAD
                     WETRLNRFLAATDREILQDAGKVTAEIAKSFALSEFEKYRVKQDLTYESDFDLLVKEV
                     AAKYHAG"
     gene            complement(13671..15995)
                     /gene="pflB"
                     /locus_tag="PXB09_000846"
     CDS             complement(13671..15995)
                     /gene="pflB"
                     /locus_tag="PXB09_000846"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDL5232984.1"
                     /translation="MTQLTDAQQKAWEGFAAGEWQTEVNVRDFIQKNYTPYEGDESFL
                     AEVTPATSKLWADVMEMIKVENKTHEPYDIDCDTPSTITSHAPGYIDKSLEKIVGLQT
                     DAPLKRAIMPFGGINMVKGSCKVYRRELKPEVEQIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVITGLPDAYGRGRIIGDYRRMALYGADFLMKDKQRQFASLQARLESGEDIQATI
                     QLREEIAEQHRALGKMKEMAASYGFDISGPATNAQEAVQWTYFAYLAAVKSQNGAAMS
                     FGRVSSFLDIYIERDLKAGKITEQEAQELIDHLVMKLRMVRFLRTPEYDQLFSGDPMW
                     ATETLAGMGLDGRTLVTKNSFRILHTLYTMGPSPEPNLTILWSEQLPEAFKRYCAKVS
                     IDTSSVQYENDDLMRPDFQNDDYAIACCVSPMIVGKMMQFFGARANLAKTLLYAINGG
                     VDEKSGDQVGPKTEAITSEYLDYDDVMTRLDSFMDWLATQYVTALNIIHFMHDKYAYE
                     AALMALHDRDVFRTMACGIAGLSVAADSLSAIKYAKVKPIRTDIEIKNKAGEVVGVAK
                     NVATDFEIEGEYPQFGNNDNRVDDIAVDLVERFMKKIQKLKTYRNATPTQSVLTITSN
                     VVYGKKTGNTPDGRRSGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTF
                     SIVPNALGKDYEAQKRNLAGLMDGYFHHEATVEGGQHLNVNVLNRDTLLDAVEHPEKY
                     PQLTIRVSGYAVRFNSLTKEQQMDVITRTFTESM"
     gene            complement(16085..16909)
                     /gene="focA"
                     /locus_tag="PXB09_000847"
     CDS             complement(16085..16909)
                     /gene="focA"
                     /locus_tag="PXB09_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDL5232985.1"
                     /translation="MFSPAEMAKIAEDGAVYKATKNQLYSFLSAITAGGFIAIAFVFY
                     TTTQVGASQMPWGMAKLIGGLVFSLGVIMCVVFGAELFTSSTLTIVARASQRINWLQM
                     FKNWVVVYFGNFVGAISIVLLIWFSGQIMAAKGQWGLVILNTAQHKIHHQWFEAFCLG
                     IFCNIMVCIAVWMSYAGKSLTDKAFIMMLPIAMFVASGFEHCVANMFMIPMGIAISHF
                     ASPEFWTAINVDPTQFADLDVSHFVFKNLIPATLGNIVGGVFFIGLMQWFLYIRKH"
     gene            17110..17604
                     /locus_tag="PXB09_000848"
     CDS             17110..17604
                     /locus_tag="PXB09_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5232986.1"
                     /translation="MTEYLTSFFSLFFSEQNQLFTMFLSGFLSATLLPGNSEIIFTTL
                     ASQHLITYGSLSSFSLFNLLLVATLGNSLGSITTYAIGLLLPRPQNTTNRYSQWALAK
                     SEKYGVLVLLFSWLPIVGDIFCGIAGWLRFSLWQSILFIVIGKLLRYLFLLATLYSVL
                     PHIL"
     gene            complement(17658..18527)
                     /gene="htpX"
                     /locus_tag="PXB09_000849"
     CDS             complement(17658..18527)
                     /gene="htpX"
                     /locus_tag="PXB09_000849"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDL5232987.1"
                     /translation="MAKRVILFLLTNLAITFVLGIVLNLIFKVTGIQGQSTAGILVLS
                     LVFGFSGSLISLFMSKSMALRSVGAEVITQPRNEAEQWLFNTVQRQAQQANIPMPDIA
                     IYHSADVNAFATGATKSNSLVAVSTGLLNSMTKDEAEAVVAHEVAHIANGDMVTMTLL
                     QGVLNTFVIFLARIISTMAASSRDENGNSSTNTLVFWVVDIVLQMVFGVLATMIAMWF
                     SRQREFRADAGSAQLVGKEKMIAALQRLQRVHEPQEMEGSLAAFMINGSRGKELFMSH
                     PPLEKRIEALRNL"
     gene            complement(18615..19697)
                     /gene="dinB"
                     /locus_tag="PXB09_000850"
     CDS             complement(18615..19697)
                     /gene="dinB"
                     /locus_tag="PXB09_000850"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDL5232988.1"
                     /translation="MSIQAKHKRKIIHIDMDCFYAAVEMRENPALVGKPVAVGGNANQ
                     RGVLTTCNYEARKFGLHSAMPTATALKKCPNLILLPVNMALYKSVSAQIHEIFHRYTD
                     VIEALSLDEAYLDVTECERYFGSATWIAQAIRNDIFNELHLTASAGVAPLKFLAKITS
                     DQNKPNGQCVITPDDVQNFVKNLPLAKIPGVGKVTNEKLKQLGFETCGDIQQAEKAVI
                     YRAFGKFGQRLWDFSHGIDERAVEPYRERKSLAVENTLLHDISTLEQAEKIVADLFDK
                     LVFRLQRNWGDTPLTEFKKLGIKLKFDDFSQTTLERTTDGFAYERFGELLQQIFTRRK
                     ERKVRLIGLSVHFPEKKVNKQLNLWE"
     gene            19820..20731
                     /locus_tag="PXB09_000851"
     CDS             19820..20731
                     /locus_tag="PXB09_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HDL5232989.1"
                     /translation="MLYGLAIVLIPLFLGYLITLKNHRHMAIVNRVVSLCLYLILLVM
                     GISLGQIDNILTELPQIGGTAFSLVVILLLSNIIGLVIYDKLQPMKRDKVNQDQLPSR
                     LHLLIDSFKLIGITLLGGIIGYFTKGVVDFPLHASTYVLEVMIFGVGIQLRNSGIPLR
                     EVFFNKRGIYTSIVMVASSLIGGVISAFTLDLSLAKGLTFASAFGWYSLSSVLVNDAW
                     GPIYGSIAFFNDISREILCLFLVPLFMRQFPSTAVGIGGATSLDCMLPIIQKSGGIQI
                     VPLAISFGFIVNLAAPLLLAVFIGLEG"
     gene            20837..22603
                     /gene="aspS"
                     /locus_tag="PXB09_000852"
     CDS             20837..22603
                     /gene="aspS"
                     /locus_tag="PXB09_000852"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDL5232990.1"
                     /translation="MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREG
                     IVQVFFDEKDEALFKQASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVV
                     YNNAEVLPLDFNQNNTEEQRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLD
                     IETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR
                     DEDLRADRQPEFTQIDVETSFMTAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEA
                     MTRFGSDKPDLRNPLEMVDVADILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKN
                     IDDYTQFVGIYGAKGLAWLKVNDMNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDI
                     VFFGADNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHH
                     PFTSPKELSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINE
                     EEQKEKFGFLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFPKTTAAACLMT
                     EAPSYANPKALEELAIRTIPQE"
BASE COUNT         6538 a         4861 c         4493 g         6903 t
ORIGIN      
        1 ttagcaccgt tttcataata gattttcatc tactcatttt cattttgatt gatttggtgg
       61 ggtaatccca ccttttttat gctcttaaaa cacaacacta tgattcaaat aaattccatt
      121 agctactctg ttgaacaaaa ccgtaaactg ctaagcaata tttccctcaa tttaagcaag
      181 gggcgtttat atggcgcata acggctcggg taaatcaacg ttaatgcgtt tactaagcgg
      241 agatataacg cctaccagcg gttcaatttt agtcgatgga ttaccacttc atcagctttc
      301 taccaaagaa gcggcaaaac atattgccta tttaccacaa cgtttacctg aagcggcgga
      361 tttcttagtg caggaactgg ttgctttagg gcgatttcca tatcaaaaat ggctacaaaa
      421 accaacagaa tttgatgttc aaattgttga gcaagcaatg gaaagcacct ccgttactca
      481 gtttgctaaa cagcctgtaa atagtctatc aggcggagaa aaacaacgag tttggcttgc
      541 tatgtgctta gcccaacaaa caccctattt actgctagat gagccattgg ctgcccttga
      601 tattgtttat caagttgaag taatgcagct tattcgcaag ctagtgaatg aacaaggtct
      661 aactgtcatt atcattattc acgatattaa tcttgcctcc caattttgtg atgaaattat
      721 tgcgttaaag caaggcgaac tctgtattca aggttctgtt gatgaaatta tgcaagaaca
      781 gaaattactt gagatcttcg ggctaaaact gcacttgttt aaccaccctg caggcttaca
      841 taaagtggcg gtattatgat gtttaggcaa tacaagcggt tcatttttct ctttattttg
      901 caaatttcta ccgcatttgc tcaacctaat atttttacac cagattggtc tattgcctct
      961 gcccttactg aaatgggaaa tccgcccatt gcgatggggg ataagcgaat ttatccgcta
     1021 tggtcgcacc gccctattca gcctaatagc gtgttagata ttggagcgcg ttatcagcct
     1081 aatcgcgaat tattagcaca gcttcctgtt gaattggtgc tatcaaactt tttctacgct
     1141 cacttggctt ctgtttaccc gaaagaaatt ccacaaatag acgtgctatt tgatggtggc
     1201 aatactgaac ctcagcaaca ttggcatact taccaaaaag ccactcgtat gattggaaca
     1261 gagattaaaa accctaatgc ggcagaagca tatttaacga aaactgaaca aacgttggct
     1321 caatggggga aagaaatcct taacagtaat ccagatattg attactactc tgttgttcaa
     1381 tttggctctc cgagagagtt acgcatatat gcgtctaatt caatgttccg tgtagccttt
     1441 gatttgatgg gcttaaaaca agctgattta ggtgtgggag atcgctgggg aaataaactt
     1501 attcctgtga gtgatttagc taaattaccc gaacgcacct gtttaattgt catctcacct
     1561 ttttctaaaa tgacgcaagc agatttagaa aatagctaca tttggcaacg tttaggattt
     1621 ggtaaaaacc gttgtatgaa agtattaccg cctgtttggc tctttggtgg ggctgattcc
     1681 atctcgcact ttgctgagtt tttacacaat gcaatgacac aaggagaaaa agagtaatga
     1741 aatcatcatt cttattgatt ggctgtattc ttttatcctt agtaacagct gttatccgtt
     1801 taaatatggt ctgggagtgg gaatggcagt tactactcat aaatgttgat ttattgccaa
     1861 ttaatcaagc tgcggtaaaa gcagctcttt tacctgaaat gacaacgtca tttttagcag
     1921 gcggtttatt ggctatagcc agcagtggct tacaacatat tgtcagaaat aatttagcgt
     1981 cagatagcac acttgccgtc agtagcgggg ctcaacttgc attgatgatt gcggttatct
     2041 ttttcccagc cgccgagctt ttttctagtt tctggattgc gttacttggc tctttagctg
     2101 ctatcgtact ggttttattt attgctaaag cctctaagct caatcccctt acccttattt
     2161 tagggggatt gattgttaat attttgtttg gagctattgc ctctttactg acccttttct
     2221 actttgattt tttatttggc gtgatggttt ggggaagtgg ctcactttta caagatggtt
     2281 gggcaacttc tattacctta gcgataacgg tagtagttgc attttttatc tttgtcttac
     2341 tctctcgtcc actcacaatt ttaagtttag atgatgaaca agctcgccgc ttaggcgcgc
     2401 ctgttaattt actacgctac ttagttattt ttgtttgtgc cgccattaca gcattggttg
     2461 taagcaaaat aggtgtgatt ggctttattg gatttgcagt gcaagtttgg ctcattttgc
     2521 caaaatacga catttattac ttcgcctctt gattgctttt ctagcgggcg gatttttact
     2581 cttttttacc aataatctca tcggcattgt tagcagaatt tacgacactc tactacctgt
     2641 tggtgcattt accgcaacac taggcgcacc attattaatt ttcttggtat tacgccaacg
     2701 taaagcacaa tttgaagcaa gcaatacagc atacttcccc gttaaacgcc tcaattcgtg
     2761 gaaactgcca atattgttgt tatgcgctgg agttatccta ttttgtctat tacaaatcat
     2821 tgctccaaca atgaatggct gggctattag cattgatgaa aacctgatga gttcctaccg
     2881 cttgcctcgt agtctaagtg cgatagcaac aggggcaatg cttgcggtaa gtggtagcct
     2941 attacaaatc ttaacgagaa acccaatggc aagccctgaa gtattaggtg tgagttcagg
     3001 ggcaactatt gctgcagtac tgtcattctt acttttccca acattatcta gcattagctt
     3061 cttgttattt ggtgtattag ggagtttgac tgttctcgct cttattatgt ggctctctcg
     3121 taaattacaa ccatcagcgt taatgattac aggtgttgct attggagctt tagtcagtgg
     3181 cttaatggct attattcaac taagcggcag ccctcgttta acggcagtta ttagttggct
     3241 gtctggctca acctattacg ctaatccgaa tacagtttgg attttattat ctgttgcaat
     3301 cctacttatc agtgccactt tactgtttat caaaccttta cgtttgatct cacttggcga
     3361 gaccgtttct taccatttag ggttagaggt taaaaaagta caaatgattg tattactttt
     3421 aattgcccta atgagtgccg cctctacact tgcggtaggg ccaatgagct tcattgggct
     3481 aatgacccct catttagcta aaaatttagg tgcaattaca ccggagaaac agatccctat
     3541 atcggcatta ttaggggcaa tgctaatgct cattgccgat tggctcgggc gttatctaat
     3601 tttcccttat gagattgggg caggcattat tgcctctatt ctcgggggta tctatttctt
     3661 actgttactc aaacaacata aataattttt tattcattac ttaggagaaa ttatgaacac
     3721 gctatctaaa gcgataaaac ttgccttata cagttctggt atagggttta tctcaacagc
     3781 ttacgctgaa acagttactc atcttgatac cgtagaagta agtgccgaaa cgccaaatgc
     3841 ctcatcggaa gaaactggac gttatgcaca gaaaaaagcc aaaggctcta atggaatggc
     3901 attgagtgcg aaagacacgc cacaaagcgt aacggctgta acgcatcaac aaatcagaga
     3961 tcaaaatctt aatacgattg ccaaagcact tgaagcaact cacggtgttt ctgtttcttt
     4021 acttgacaga ggacgctatt ctttcagtgc tcgtggtttt gggattgata aagtcaaggt
     4081 agatggtatg gatctcaaag taagtaaata accaatggac aacgggcgaa aatacaggca
     4141 acagcgtgtt atacgaccga gtagaagttg tgcgtggtgc tacaggctta actactgggg
     4201 caggcgatcc ttctgcaagt gttaatcttg ttcgtaaacg agccaatagc atttcccgtt
     4261 atactatttt agaagctgga atcgggcgtt atgctgattt caatacaatg attgaccata
     4321 gccaagcatt gaataattca ggatcagtaa gaggccgctt tattgcagag cataaaaacg
     4381 gtaatacgtt cattaaaaat gaaaaagaac gttacaccac gctttatggc aatattgaag
     4441 cagacttaac tgacactacc aaacttgggt taggtgtaag ctatcaaaaa gaaaaacgtg
     4501 atgcagcact ttggggtggt ttacccgcat tctatagcga cggtggtgaa actaactgga
     4561 gcagaagcaa aaatgccagt ccggaatggg cttactggga taatgaatcc gtaaactatt
     4621 ttgccgatat tacacaaaaa ctaggcgaaa aatgggaact tgcattaaaa ggcaattacc
     4681 gtgtaggcaa acataattca gaacttttct atttcagcgg ctcatcactt aatcgccaag
     4741 atggattagg ttggtcgcct tggccgggta aatttaaaaa tgataataca caatctaatg
     4801 tgcagcttga tcttaccggt tcattctctg cttggggatt agaacacgat gcggcaatcg
     4861 gtattcaata caatcgagca catcgtaatt cctacgctgc cgataatagc acctttgacg
     4921 gagctttcga ctttaataat tggaatggca tttatgctag accaaactgg ggaagtatgt
     4981 ctgaaaaata ctaccaaaac ttaaaagagt tcggggtgta tgtttctacc cgtttacatc
     5041 ttacagatag actttctatg cttctaggtt ctcgtatttc atcgtaccgc acagaaggca
     5101 ctttctatgg ttcaacacaa aacttccacg ctaacgatgt ttggacacct tatgcaggat
     5161 taacctttga tattaatcca caaaataccg tttatgtaag ttataccgat attttcaaac
     5221 cacaaagtca agtggacatc aataacaaac tactctctcc tgttacgggc gaaacctacg
     5281 aagcaggttg gaaagggagt tatttcaatg acaacttgca aactcaaatt agcgtatttg
     5341 aaacaagaca agataatcta gctcaatctg ccggtattaa ccctaataca ttattagcct
     5401 actacacagc ctctaaaggt gcgaaagttc gaggctttga agtagaagca tctggaaatg
     5461 taactgaaaa attaaaactc agtgcaggat atactcagtg gaaaggcgat gatgcttcag
     5521 gtaacccaat taacacaact caaccacgca aacaatttaa actctttgca acttacgata
     5581 tgaaccgttt agtgcaaggt ttaacggtag gagcaggtgt aaactggcaa agcagaattt
     5641 ataccaaaca cgctacttat ggcgaatatg gtcaaaaagc ttacacttta gtgaatttga
     5701 tggctcgtta tcaatttaat gacaacttct cagcacagct taacattgat aacttattcg
     5761 ataaaaaata tcgtaacgcc ctcagcttta gccaatatag ctacggtgag ccattctata
     5821 cacgcttaaa tttacgctat gaattctaat tccgtataac aagcggtcaa aaaattaaaa
     5881 aaatttgcaa ttttaggcag taatcggtaa ggttactgcc taagtgattt tattattttt
     5941 agtttaattg aggttttcaa atgaaagtga ttttattagg tgcgccgggt gcgggcaaag
     6001 gtacgcaagc tcagtttatt atgaacaaat tcggtattcc gcaaatttca accggcgata
     6061 tgttccgtgc agcgattaaa gaaagcactg agcttggtaa acaagcaaaa gcattgatgg
     6121 acgaaggcaa gttagtgccg gatgaattaa cggtcgcctt agtaaaagat cgtattgctc
     6181 aaccggattg tgctaatggc ttcttattag acggtttccc acgcaccatt ccgcaagctg
     6241 atgcgttaaa agagtcaggt gtaaaaattg atttagtgtt agagtttgat gtagctgatg
     6301 aagtcattgt tgagcgtatg agtggtcgtc gtgttcacca accttcaggg cgtacttacc
     6361 acgtggtgta caatccaccg aaagtggaag gcaaagatga tgtgactggt gaggatttaa
     6421 ttatccgcca agatgacaaa cctgaaacgg tattagagcg tttagcgatt taccacaaac
     6481 aaaccaaacc gttaatcgcc tactacaccg cagaagcaga agccggcaac actcgttatg
     6541 agcgtttaga tggaacaaaa ccagtggaag aagtaagtgc tgagttagcg aaaattttat
     6601 cttaaatgga ttattaaaat gaacaagcgg taatattttt cgagaatatt accgcttgtt
     6661 ctttgcttaa acacaatatt tggtgagcat taagatatca tcataaatcg gtgaaataaa
     6721 cacttccgga ttttcaatct tcatctcctt tggtttttct tctagctttt ctggctcttt
     6781 cttatcttta ttctctaccg gttgagtcgc ttcatttacc acactagctt gagttttatc
     6841 tgctacaggt atatctattt tgtttggtgc ttgctctact gcttgagaat ccgctttcag
     6901 ctctttagaa acttcagtat ttacgatagg ttcttgtaag ttttccgcta ctctttcctc
     6961 tacttgtggc ttaatacttt ctgcctctgc tctcggttta taagatggat caagtaattg
     7021 atggctaata tccattttcg gatcaagcca aattgctaca atagcatcat tgaaagcttt
     7081 attaaacaca tcagagacta ctttatcatt taaaataaaa taacctctat cttctaatgc
     7141 aatatagtgc aatgtatctt caggcttaat atctgggaaa gtttttctca ggtgggtaat
     7201 aacctcatct aactcttttt caggtagctt aatgcctaaa ttattccaag ttcttgctaa
     7261 agaaaccgca aaatcacgcc cctcccacgg ttttttatat tgtagagtaa gcattaaagg
     7321 acgtgtacct tctacataag taccgctctc agtaaaaagc gtaatatggt aaatattaaa
     7381 tggcccccac gtataattca catcattaat ttttgtccaa tttgcatttg ctgttgataa
     7441 aaatagagaa aacaacagcg aaaagaccac tttatagctc attatttttg tgtccttaaa
     7501 tctaaaattc ctactcatta ttatagcctt aaatatggct cacacacatt ataattttcg
     7561 atataaattt tgtgatcaag ttcaaaaaaa tagaaagatt taacagtaaa tcaacaaaaa
     7621 aatgctagta tttaatcaag taaaatttgc aaccactatt aggagttaaa tatgtttcca
     7681 gaatttcgtg atctcataac ccaattaaag caaaacaatt cacattttgc tcgcttattt
     7741 gataaacata atgagctaga ccagcgtatt aagaatatgg aggcaaatat tgaactggca
     7801 acacatgaag aagttgaggc actaaaaaaa gaaaaattgc atttaaaaga ccaactttat
     7861 gcaattctaa aacaagaatc ggcttaacct aaagtaaaag ctcagaaaat attctgagct
     7921 ttaatttcgg tcatattaga caatattaca gttttaccgg ctcaataatt tcgcttgggt
     7981 agcaacccaa cactttgagg tagctggtaa cttgctccaa ttccgccaat gctttttggg
     8041 tgttctcgga atgaatattt gcctccagct ccacataaaa catctcttcc caaggtttgc
     8101 cgtaaatcgg gcgggattcc agtttcatca tacgaatatg atgatttttg aataccatta
     8161 acgcatcgac caatgcaccc gcctgttgcg tggtggtcat taacagtaac gttttggttt
     8221 gtacctgtgg cgaaacctgc acagcctctt tggcaacaac aataaaacgg gtgatattgt
     8281 gagcttgatt agcaatatcg gttttgatat tcgtcaagcc atacaatttt ccgccatctt
     8341 cattgcccaa ggcaacaata ttcggcttat tcaagcgagc caccatttgc attgcgtgcg
     8401 agctgctttc gcaatatttg atatgtactt tatctagccc ggctaaaaat tggctacatt
     8461 gctgggcagg ctgagggtgg gtgtaaatgg tatccacctc cgccaaatca accgtgccgt
     8521 ttgccaatac acaatgtttg attgggtacg ccaattcacc cactaaggtt aaatcggtat
     8581 gctgcaataa atcatacact tcattgatcg aacctgaagt cgtgttttca agcggcagta
     8641 cgccaaaatc ggcttcacca aggctgactt tctcaaatac ttcattaaaa gaatggcagc
     8701 ttaattccgc caatgtgcct tgatattttt tggcaaactg tcgagatgcc atattagaat
     8761 aagagcctcg cattcccaaa aacgcaatcg aaacctgctc ttctttttgt gcattcaatt
     8821 tattttgcag ataattttgc tgagtcagca ctgaatcttc aataatacgt tggaaaattt
     8881 gggtcacata ttgcggatca agctggtaat tctccgcttc ggcaaaattt accagttctt
     8941 gaagcaaaat cttttcccgt tctaaatctc tcaagggttt ttgtgtgatt tctttgctcc
     9001 gcaccacatc aaaggctaag cggtggcgtt ctgccagtag ctttaataaa ttgcggtcta
     9061 agttggttat ttgggttcga atatcggcta aatctaaaga cattatttca ctctctgtca
     9121 ggctaaatgc tgaaaattat aacgagttgc aaaagaaaga aaagacaagc ggtcaaattt
     9181 acaaaaaaat ttgcaaatct aaccgcttgt aaaacgtgtt tactttattg agtgcaatca
     9241 acaggctcgg cattacctac aatgcctttg tgtctgagca aggcatcaag ggttggctta
     9301 cgcccacgga agcgttcgaa cagcaccatt ggctcttctg aaccgcctcg ggttaagata
     9361 ttatctaaga aagactgccc cgtttcaggg ttgaaaatcc cctcttcctc aaagcgtgaa
     9421 taggcatctg ctgaaagcac ttccgcccat aaataactgt agtagcccgc cgcatagccg
     9481 cctgcaaaaa tatgcgagaa actgtgtggc gttctcgccc actctacgcc tttggcaaca
     9541 gcgacttggt ctttcacctc tttaagtaag gctaacactt gtccttgttt gctcgggtca
     9601 tattcggtgt gtaggcggaa atcaaacaag ccaaattcta attggcgaag cacaaacatt
     9661 gccgcttgga agtttttcgc cgccaataat tgctctaatt tcgcttttgg taacggctcg
     9721 ccggtttcat aatgccctga aataaaggct aatgcctctt cttcccagca ccagttctct
     9781 aagaattggc ttggcagctc cactgcgtcc cacggcacac cgttaatgcc ggcgacatcg
     9841 cccacgtcaa tttcagttag catatggtga atgccgtgtc caaactcgtg gaacaaagtt
     9901 gtcacttcat cgtgggtaaa caatgccggt ttatcgccaa tcggtttatt gaagttacag
     9961 gttaaatatg ccaccggttt ttgtaatgtg ccgtcagcca agcgtttttg gttgatgcaa
    10021 tcatccatcc acgccccacc acgtttgttt tcacgagcgt ataaatctaa gtagaacgag
    10081 ccacgcaagc ggtcattttt atcaaaaata ttgaaaaaac gtacatcttt gtgccataca
    10141 tccacatctt tttgttcttc cacacgcata ccgaaaatgc gtttaattac ttcaaataag
    10201 cctgataata cgcgattttc cgggaaatac gggcgaagtt cttcatcatt gaccgaatac
    10261 aatgcctgtt tttgtttttc gctgtagaac ggaatatccc ataaatccaa atgttcaatg
    10321 ccgaaatggg ctttagcaaa ttttttcaaa tcgcataatt catttttgcc ttgagctttc
    10381 gagcgagcgg ctaaatcgtt caagaaatct aatacctgtt gtggattttc tgccattttg
    10441 gtggctaatg aataatcaga ataagtctta aagccgagaa gttgggcttt ttcgtgacgc
    10501 agttttaaga tctcatcaat caccgcactg ttatcccatt tgcctgcatt cgggccttga
    10561 tcagaagcac gagtcacata agcacggtac atttcctcac gcagtgcttt gttttcacaa
    10621 tacgtcatca ccggcaaata gcttgggatt tcaagagtga agcgatagcc tttcttacct
    10681 ttgctttctg cggataattt tgccgcttct aatgccgatt ccggcaagcc tttaagctgt
    10741 gcttcatcgg taattacaat atcccaaccc attgttgcat caagtacgtt gttgctaaat
    10801 tgcgagttga gttccgacaa gcgtgcagaa atttccccgt agcgtttttg tttctctgcc
    10861 ggcagtgaaa tgcctgataa ttcaaaatct tgtaagctgt tttcaatcgc ctttttctgt
    10921 gcaaccgaat aagtttcaaa ctcagggctg ttttttaact tcacatagcc ttgatataac
    10981 ccttgatgtt gccccgccca agtgctgtat tccgataata acggcaagca cgcttggtaa
    11041 gcctcacgca actctgggga atttttcacc gcattcaaat gccctaccgg tgaccacgca
    11101 cgggagaatt tatcctctgc cattgcttgt ggcatataga aattttccca cgtcgggttt
    11161 tcaatttgtg cgactttttc aacagtttca cggcattctt tgatcaccgc ttctaccgcc
    11221 ggtttgatat gttcaggttt gatttgtgag aacgcaggca agcctgtgta atttaaaaga
    11281 gggttagaca ttattttttc cttttatggt caaaatgaaa attcgtatca agataataca
    11341 caaagtgaga gagaaaagaa aacaagcggt catatttcaa taattttttg caaaaaaatc
    11401 acaaaatatg accgcttgtc tttagaattt gactgtatgc ccgtaacttt caatgatttt
    11461 ttggatacgc tctaaatcct ctttaggcgg tgacattacc ccttccagct catatttata
    11521 gcctaaggtt tcccatttgt gagcccctaa acgatgataa ggcagaagtt ccactttctc
    11581 aatgttatcc attccttgaa taaactgccc taaacgatgg gcagaatcat cgtcatcagt
    11641 ataacccggc acgaccacat agcgaaccca agtcggttta tttaatttgt gcagataacg
    11701 ggcgaaatca agggtacgct tattcgacac cccgactaaa tcttggtgaa cttcatcatt
    11761 gagctgtttt aaatccagca agaccaaatc ggtcacttca agcatttcat ccaccaccgg
    11821 gctataatgg cgaacaaaac cattggtatc taagcaggta ttaatgcctt cagccttaca
    11881 ggcacgaaac caatcccgca caaactccat ttgcaacacc gcttccccac ccgaagctgt
    11941 tacaccaccg ccggttgctt tcataaaatg cttataagtc gtgacttctt tcatcagctc
    12001 ttcaaccgta atttccttac caccatcaag atcccaagta tcacgattat ggcaatattt
    12061 acaccgcatc aaacagcctt gcaagaacag aataaaacga atccccggtc catctaccgt
    12121 accgcaggat tcaaaagaat ggatacgtcc aacaacagac atttgtcacc tcaaccctca
    12181 aaaaattttg agaaattgta gcaaattttt atgttgttcg cagaaataaa tcacaccggt
    12241 atattttaag aaaggagaaa gtcatactat tttttgccta tttcaggaat aaacttttat
    12301 taatctattg actccatcaa catatcaacc aaatatgttt aaatttttgc attttttaaa
    12361 gctattttga ccgcttacaa gcagtcggtt tttctgaaaa ctttgcaaac ctagccggcg
    12421 tggtatttgg cggcgacctc ttttaccagt aagtcgaaat cgctttcgta ggtgagatcc
    12481 tgcttgactc ggtatttttc aaattcgctg agggcgaaag atttagcaat ttcagcggta
    12541 actttgccgg catcttgtaa gatttctcgg tcggtggcgg caagaaagcg gttaaggcgg
    12601 gtttcccagt ctgccattgt catcggaatt tggcgttctg ccatatcttc cgccatatcc
    12661 aaataggcag agaccagccg ttgtagttgt gctaattcat tatccgataa ataatttttg
    12721 gcaaccacca catcaaaggg gtaaattttg ccttgcggag cgtctttcca attcgttagc
    12781 cccatattcg gcttttcagc gttggctcgt gccataatca gctcggcggc ggtatgcccg
    12841 tgaattgccc aatggagctt gttctgcacg gtggcaaaaa agcgtttggt ggcggttgcg
    12901 gtgcggtcgt agtccacggc ggtagcgtaa atgtcggtga ttttttggta gaacttgcgt
    12961 tcggataacc gaatttcccg aatacgagca agctgttctt caaagtattt tttgcccaaa
    13021 atcgtgccgt catttttcag ccgttcatcg tccatcgcaa agcctttaat cgcaaagcta
    13081 tgcacgattt cggttgccca tttgcgaaac tgcaccgctc gctcggaatt gactttataa
    13141 cccaccgcaa taattgccga cagattataa tgcttggtgt ggtagttttt gccgtcttgg
    13201 gcagttatcc aaaaaaattg gataactgaa ttttcagcta actcattgtc actaaagatt
    13261 tttttgagat gatagctaat ggttcgtaca tcaacatcat acaacaccgc catcattttt
    13321 tggctaagcc atacattttc atcggcgtaa acggcatcaa cttggctttc gccggtagct
    13381 gtaataaaag tgaggtattc cgccacagag gaacgaatta aatcttgctt agacatctct
    13441 ttctcccata tagaacactg taattataaa caatattacg aaagctgtgt aaatgaatag
    13501 ccaatttttc gagcgagatc acaaaaaaac cgcttgcggc ataaatgcta caagcggttg
    13561 attattactc acaaaattgt ttccaatttt gttcgctcct acggagccgt cggcaaagcc
    13621 aacgttcaaa acgcaatgcg ttttgtggct aaaagttttg caaattgtaa ttacatactt
    13681 tcagtgaagg tgcgggtaat tacgtccatt tgttgctctt tggttaaaga gttgaaacgt
    13741 accgcatagc ctgaaacacg aatcgttaat tgcggatatt tttcagggtg ttctaccgca
    13801 tctaataatg tatcacggtt taacacgttc acatttaagt gctgaccgcc ttctacagtt
    13861 gcttcgtggt ggaagtagcc gtccattaag cctgcaaggt tacgtttttg ggcttcgtaa
    13921 tctttaccta acgcatttgg tacgatagag aaagtataag aaataccatc tttcgcatag
    13981 gcaaacggta atttcgccac agaagttaat gaagctaccg cacctttctg gtcacgaccg
    14041 tgcattgggt tcgcacccgg tccgaatgga gcacctgagc gacgaccgtc cggtgtatta
    14101 ccggttttct taccatatac cacgttagaa gtgatagtaa gcacagactg agtcggcgtt
    14161 gcattgcggt atgttttgag tttttgaatt ttcttcataa aacgttcaac taaatcaact
    14221 gcaatgtcgt ccacacggtt atcgttgtta ccgaattgcg gatattcacc ctcaatttca
    14281 aagtcggttg ctacgttttt cgctacacca accacttcgc cagctttgtt tttgatttca
    14341 atatcggtac ggattggttt tactttcgca tatttaatgg ctgaaagtga gtctgccgct
    14401 actgaaagcc ctgcgatacc acacgccatt gtgcggaaca catcacggtc gtgaagagcc
    14461 attaatgccg cttcgtatgc atatttatcg tgcataaagt ggataatgtt cagtgctgtc
    14521 acatattggg ttgcaagcca atccataaag ctgtctaagc gggtcattac atcatcgtaa
    14581 tctaagtatt cacttgtaat tgcttcagtt ttaggcccta cttggtcgcc tgatttctca
    14641 tcaacaccgc cattgattgc gtataacaag gttttcgcta agtttgcacg agcgccgaag
    14701 aactgcatca ttttacccac gatcattggc gatacgcagc acgcaatcgc atagtcatcg
    14761 ttttggaaat ccggacgcat taagtcatcg ttttcatatt gaactgatga agtatcaata
    14821 gacactttcg cacagtagcg tttaaatgct tccggtaatt gttcagacca aagaatagtt
    14881 aagtttggct ccggtgacgg ccccattgtg taaagggtgt gtaaaatacg gaagctgttt
    14941 ttggttacta aggtacgacc gtctaaaccc ataccggcta aggtttcggt tgcccacatt
    15001 gggtcgcctg agaataattg atcgtattcc ggagtacgca agaaacgcac catacgcaat
    15061 ttcattacta aatggtcgat taactcttgg gcttcttgct cggtaatttt gccggctttt
    15121 aagtcacgtt cgatataaat atctaagaat gaagacacac gaccgaaaga catcgccgca
    15181 ccgttttgcg atttaaccgc tgcaaggtaa gcgaaatatg tccattgcac cgcttcttgt
    15241 gcattggttg caggacctga aatatcaaaa ccgtagcttg cagccatctc tttcattttg
    15301 cctaaagcac ggtgttgctc ggcaatttct tcacgcagtt gaatcgtggc ttgaatatct
    15361 tcgccggatt ctaaacgagc ttgtaatgag gcaaactggc gttgtttgtc tttcattaag
    15421 aagtctgcac cataaagtgc catacggcgg tagtcaccga taatacgacc acgaccataa
    15481 gcatccggca aaccggtaat tacacctgat ttacggcaac gtaaaatatc cggagtgtaa
    15541 acatcgaata ccccttggtt atgggtttta cggtattcgg taaagatttg ttctacttca
    15601 ggtttaagct cacggcgata aactttgcac gaacctttca ccatattgat accaccaaac
    15661 ggcataatcg cacgttttaa tggagcatct gtttgcagac caacgatttt ttctaacgat
    15721 ttatcaatat aacccggtgc gtgtgaggta atggttgatg gcgtgtcgca gtcaatatca
    15781 tacggttcgt gtgttttgtt ttctactttg atcatttcca tcacatctgc ccacaatttg
    15841 ctggttgcag gtgttacttc agctaggaaa gactcatcac cctcataagg tgtgtagttt
    15901 ttttggataa aatcacgtac atttacttca gtttgccact cgcctgcggc aaaaccttcc
    15961 cacgcttttt gttgagcgtc tgttagttga gtcattttaa gtcctctgtg ttagtaagtt
    16021 aaaacgggaa agcggtgatt ttttgcaaaa aatttgcaaa atttgaccgc ttgaatctga
    16081 aatcttaatg ctttctaatg tataagaacc actgcattaa accaatgaaa aacacgccac
    16141 cgacaatatt acccagcgtt gccggaatta agttcttaaa cacaaaatga gatacatcta
    16201 aatcggcaaa ttgcgttggg tcaacattaa ttgctgtcca aaattcaggg ctggcaaagt
    16261 gcgaaatcgc aatccccatc ggaatcataa acatatttgc cacacagtgt tcaaagccgg
    16321 aagccacaaa cattgcaatc ggtaacatca taataaaggc tttatcggtt aggcttttac
    16381 ctgcataaga catccacacc gcaatgcaca ccataatgtt acagaaaatg cctaaacaga
    16441 aagcctcaaa ccattggtgg tgaattttgt gctgtgcggt atttaaaata accaaacccc
    16501 attgcccttt ggctgccata atctgaccac taaaccaaat caacaataca atggaaatcg
    16561 ccccaacaaa gttaccgaaa tacaccacta cccagttttt aaacatctgt aaccagttaa
    16621 ttctttggct ggctctggct acaatcgtaa gtgttgatga ggtaaaaagt tctgccccaa
    16681 acaccacaca cataatcacg ccgagtgaaa ataccaaacc accaatcagt ttagccatac
    16741 cccaaggcat ttggctcgca cccacttggg ttgtggtata aaatacaaat gctattgcaa
    16801 taaaaccgcc cgcagtaatg gcagagagaa aggaatataa ttgatttttt gttgctttat
    16861 aaaccgcacc atcttctgcg atttttgcca tttcagcagg agaaaacatc agacaacctt
    16921 aacaatgaga attgaaaaac cgatatatta tgtagaaatt atagacctct tgagataatc
    16981 ttcaaataaa aatattacac aatcagaggt atttcgatgt ctttttttga tatagaacaa
    17041 aatccataaa aaacacaaca ttcaagaaaa tttataacta cattttaata acaaaccaac
    17101 tacaatttta tgacagaata tctcacttcc tttttcagtt tattcttttc cgaacaaaat
    17161 caactcttta ctatgtttct gagtggattt ctaagcgcta ccctcttacc cggaaattct
    17221 gaaattatct tcactacctt agcaagccaa catctcatca cttatggctc tttatcctca
    17281 ttttcactgt tcaatttact cttggttgca accttaggta atagtttagg tagcataacc
    17341 acttatgcga tagggctatt actccctcgc ccacagaata ctaccaatcg ttattcacaa
    17401 tgggcattag ccaaaagtga aaaatatggc gtgttagtct tgctttttag ttggttaccg
    17461 attgtaggcg atattttctg tggcattgcc ggctggctac ggtttagcct ttggcaaagc
    17521 attctcttta ttgtgattgg gaaattgtta cgttatctgt ttttgctggc aactctctat
    17581 tcggtgttac cgcatatttt atagaaaaca aaagcggctg ttttgcaaaa aattttacaa
    17641 aaacaaccgc ttgtgcttta taagtttctt aacgcttcaa tacgtttttc taacggaggg
    17701 tggctcataa acaactcttt accacggcta ccgttaatca taaaggcagc aagagagcct
    17761 tccatttctt gcggttcgtg aacacgttgc aagcgttgta atgccgcaat cattttctct
    17821 ttaccgacta attgagcaga gcctgcatct gcacgaaatt cacgttggcg agagaaccac
    17881 attgcaatca ttgttgctaa cacaccaaac accatctgta acacaatatc tactacccag
    17941 aacaccagcg tattggtgct tgaattgcca ttttcgtcac gtgaacttgc cgccattgtc
    18001 gaaataatac gagctaagaa aatgacgaaa gtatttaaca cgccttgtaa taaagtcatt
    18061 gtaaccatat cgccattcgc aatgtgcgcc acttcgtgtg ctactaccgc ttcagcttcg
    18121 tctttagtca ttgaattcag caagccggtg ctgactgcaa ctaaagaatt acttttcgtt
    18181 gctcctgtag cgaatgcatt tacatcagcc gaatggtaaa tcgcaatgtc cggcattggg
    18241 atattcgctt gctgagcctg acgttgtaca gtgttgaata accattgctc cgcttcgtta
    18301 cgaggctgtg taatcacctc tgccccaacc gaacgcaatg ccattgattt cgacataaat
    18361 agcgaaatta aagacccact gaaaccgaag actaacgaaa gcaccaaaat accggcagtg
    18421 ctttgccctt gaatgccggt cactttaaaa ataaggttta atacgatccc taaaacaaag
    18481 gtaatcgcta agttagttaa taaaaataga atgacacgtt ttgccataat gttttcaatc
    18541 tccaaaaata tagatgcaat gattgcacga ataagataat gactttagcc ttaatttcaa
    18601 gtcattattt acaattattc ccacaaattt aactgtttat tcactttttt ctcgggaaag
    18661 tgaacactta gaccgattaa tcgcaccttt cgttcctttc ttcgggtaaa aatttgctgt
    18721 agcaactcgc caaatcgctc atacgcaaag ccatcggtgg ttcgttcaag cgtggtttgg
    18781 ctaaaatcat caaacttgag tttaatgcct aactttttaa actcagttaa tggcgtatcg
    18841 ccccagtttc gttgcaaccg aaaaaccagt ttgtcgaata aatctgccac aatcttttcc
    18901 gcttgctcaa gggttgaaat atcgtgcaac agcgtatttt ccaccgccag cgattttctt
    18961 tcacgataag gctctaccgc tcgttcatca ataccgtggc taaaatccca aagccgttgc
    19021 ccgaatttgc caaacgctcg gtaaataacc gctttttctg cttgctgaat atcaccacag
    19081 gtttcaaagc caagctgttt taatttttca ttggttactt tccccacacc cggaattttt
    19141 gcaagcggta gatttttcac aaaattttgc acatcatcag gcgtaatcac acattgtccg
    19201 ttaggtttgt tttgatcgga ggtaattttt gctaaaaatt taagcggagc aactcctgcc
    19261 gaggcagtta aatgcaattc attgaaaata tcattgcgga ttgcttgagc aatccaagtg
    19321 gcggagccaa aatagcgttc gcattcggtt acatctaaat aggcttcatc aagcgacaag
    19381 gcttcaatca catccgtata gcgatgaaaa atttcgtgaa tttgagcgga aaccgattta
    19441 tacaacgcca tattcaccgg caataaaatt aaattcgggc atttcttcaa cgcagttgcc
    19501 gttggcattg cactgtgtaa gccgaatttt cgagcctcgt aattacaggt tgtcagcaca
    19561 cctcgttgat tagcattgcc gcccaccgcc accggcttac cgaccaacgc cgggttttcc
    19621 cgcatttcga ccgctgcata aaaacaatcc atatcaatat ggataatttt tcgcttatgt
    19681 ttagcttgaa tcgacatttg caatattttc cccaaaaacg accgcttgca acacaaataa
    19741 ctgtatataa aaacagtttt attttatgcc cttattgtta gaatttcaag tttaaaaata
    19801 gcgataaaaa ggataaaaaa tgctctacgg tttagccatt gtgctgattc cactttttct
    19861 cggttactta ataaccctca aaaaccaccg ccatatggca atagtaaaca gagtggtcag
    19921 cctctgcctt tacttgattt tattagtgat ggggatttct ctcggacaaa ttgataacat
    19981 tctcaccgaa ctgccacaga ttggcggtac ggcgtttagt ttagtggtga ttttactcct
    20041 ttcaaacatt atcggcttgg tgatttacga caaattacaa ccgatgaaaa gagacaaagt
    20101 caatcaagat caacttccct cccgcctgca tttgttgatt gattccttta aattaatcgg
    20161 cattacctta ttaggcggga tcatcggcta tttcaccaaa ggcgtggtgg atttccctct
    20221 gcacgccagc acctatgtgt tagaagtgat gattttcggg gtggggattc aactgcgaaa
    20281 cagcggtatt cccctgcgtg aagtgttctt taacaagcgg gggatttata cctcgattgt
    20341 aatggtggca agttccctga ttggtggcgt gatttcggca ttcaccttag atttatccct
    20401 tgctaaaggc ttaacctttg cctctgcatt cggttggtat tccctttcaa gcgtattggt
    20461 aaacgatgct tggggcccga tttacggcag tattgccttt tttaacgaca tctcgcgtga
    20521 aattttatgc ctgtttttag taccactgtt tatgcgtcaa tttccgtcca ccgcagtcgg
    20581 cattggcgga gcgacttcat tagattgtat gctccctatt attcaaaaat cgggcggtat
    20641 tcaaattgtg ccgctggcaa tcagcttcgg ttttattgtt aatttagccg ctccattgtt
    20701 attagccgtt tttattgggc tggaaggata aatcaccgct tgtttgcttt tatttatcca
    20761 tcttcgctga attttccgct ataatcctta agttttcccc gaaacttggg atatttattt
    20821 tcaaaaggat aattttatga tgcgttctca ctactgcggt gcattaaacc gctcacacct
    20881 tggacaaaca gttaccttaa gcggttgggt tcatcgtgtt cgtaaccttg gtcgttttat
    20941 ttttatgcaa attcgtgatc gtgaaggcat tgtgcaggtg tttttcgatg agaaagatga
    21001 agcacttttc aagcaagcat cggccttacg ttctgaggcg tgcgtgcaaa ttcaaggtga
    21061 agtgattgcc cgtgatgaat cgcaaatcaa taaagagatg gcaaccggtg aaattgaagt
    21121 gttagtaaaa aatttagtgg tgtataacaa cgctgaagta ttgccgttag acttcaatca
    21181 aaacaatacc gaagaacagc gtttaaaata ccgctatttg gatttacgcc gccctgaaat
    21241 ggcagaaaag ctcaaaaccc gtgctaaaat caccagtttt gtccgccgtt ttatggacga
    21301 taacggtttc ttagacattg aaaccccgat gctgaccaaa gctactcctg aaggtgcgag
    21361 agattacctc gtgccaagcc gtgtgcataa aggcaaattc tatgctctgc cacaatcacc
    21421 tcagctattt aaacagttgc taatgatgtc gggcttcgac cgttattacc aaatcgtgaa
    21481 atgtttccgt gatgaagatt tgcgtgccga ccgccagccg gaatttaccc aaatagacgt
    21541 ggaaaccagc tttatgactg ccgaagaagt gcgtgcatta atggaagcga tgatccacgg
    21601 cttatggaaa gagaccttag gcgttgatct cggtaaattc ccaatgatga cgtggaatga
    21661 agcaatgacc cgtttcggtt cagacaaacc ggatttgcgt aacccactgg aaatggttga
    21721 tgtggcagat attttaaaat cggttgattt caaagtattt agcggtccgg cgaatgatcc
    21781 gaaagggcgt gtagtggcac ttcgtgtgcc aaacggtgca gctctaaccc gtaaaaatat
    21841 tgatgactac acccaatttg tcggcattta tggggcaaaa ggcttggctt ggttaaaagt
    21901 gaatgatatg aacacaggtt tagaaggcat tcaaagcccg gttgcaaaat tcttaaatga
    21961 agaagtgcta aaagccttag ttaaacgctt aaacttgcaa aaagacgaca ttgtattctt
    22021 cggtgcggat aactggcacg ttgcgactaa cgccatcggt gcgttacgct taaaagtggg
    22081 gaacgattta ggcttaaccg ataccacagc gtggaaaccg ttatgggtga ttgatttccc
    22141 aatgtttgaa cgtgatgatg aaggcaactt atcggcaatg caccacccgt tcacttcacc
    22201 gaaagaatta tcgccggaag aattagtgca agatccggaa aatgcggtgg caaacgctta
    22261 cgatatggta attaacggct acgaagtggg cggtggctcg gtacgtattt tcagccagca
    22321 gatgcaacaa accgtgttca gcattttagg cattaacgaa gaagagcaaa aagagaaatt
    22381 cggtttctta ttagatgcgt taaaattcgg tactccgcca cacgcaggct tagccttcgg
    22441 tttagaccgc ttaacgatgt tgattacagg aactgataac attcgtgatg tcatcgcttt
    22501 cccgaaaacc accgctgcag cgtgtttaat gacagaagca ccaagctatg cgaatccgaa
    22561 agcgttggaa gagttagcaa tccgtacaat tccacaagag taatcggtag gggcgaaaca
    22621 tttttcgccc tttttattta acaagcggtc gaaaaagtga aaaactttgc aaaagtaata
    22681 atcgcaaaat tattctctaa ataacataat aaagactctt ttctcttctc tatgttacta
    22741 ctaaatatcc cctattattt taattattac cttatttggg tattgagcag attta
//
LOCUS       DANLTI010000028        22664 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.028, whole genome shotgun sequence.
ACCESSION   DANLTI010000028 DANLTI010000000
VERSION     DANLTI010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22664
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.028"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            67..840
                     /locus_tag="PXB09_000853"
     CDS             67..840
                     /locus_tag="PXB09_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5232991.1"
                     /translation="MLKKLSIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAP
                     YTYHDASGKLTGYDVEVTRAVAEKLDVKVEFKETQWDAMLAGLKGERFDLVANQVALT
                     SPERRATFDKSESYSWDGAALLVREDETKIKTPADVKGVKTAQTLSSNYGEIARENGA
                     DIVPIDGMAQGLLLIQQKRADATFNSHLSLLDYLKKNPNSGLKIVWEKEEKVGAGLIA
                     NKGNDEALAKISKAIVELREDGTLKKLGEQFFGKDISVQ"
     gene            923..1639
                     /locus_tag="PXB09_000854"
     CDS             923..1639
                     /locus_tag="PXB09_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDL5232992.1"
                     /translation="MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFI
                     IGMLIAVAVALVRISPATGFFHRLLLWLVKGYISIIRGTPMLVQICIVFYGLPAIGIF
                     IDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAF
                     RVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFC
                     WVLFLIQARLEVRFNRFVAK"
     gene            1649..2401
                     /locus_tag="PXB09_000855"
     CDS             1649..2401
                     /locus_tag="PXB09_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDL5232993.1"
                     /translation="MLKIRNIHKTFGNNAILRGIDLDIQKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEQGTLEFSGNAPLKIDFAVKQSKKEILALRRKSGMVFQNYNLFPHKTAL
                     ENVMEGPVFVQQQAVEIAQKNAKALLEKVGLADKAELYPFQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNTMKELANEGWTMVVVTHEIKFALDVADVVVVMDG
                     GEIVEQGSPQQLFNHPQHERTKRFLNQIRADK"
     gene            complement(2617..3150)
                     /locus_tag="PXB09_000856"
     CDS             complement(2617..3150)
                     /locus_tag="PXB09_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDL5232994.1"
                     /translation="MEFLAPVISLIVGFLSFVLVLRTWLQFCRVDPRLPISQTLLKIT
                     EPMVSPVGKLIPTVKNICFPALLIAAALVTLQFILFGVDLPRAVLIGLLSVVKTFGQI
                     LFFTTLIRALMSWVTQGNHPLDYTVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLL
                     LLNSLFYQIFGGLWAAA"
     gene            complement(3256..3597)
                     /locus_tag="PXB09_000857"
     CDS             complement(3256..3597)
                     /locus_tag="PXB09_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDL5232995.1"
                     /translation="MAIQRNARQRKKMHLGEYQELGFLIKFTFAEGTGIDQIDETVDR
                     FIDEVIRPNGLALEANGYLNWEGLVCLEKLGKCDESHRQLVKTWLETNGLKEVQVSEL
                     FDIWWDYPAQA"
     gene            complement(3621..4370)
                     /gene="trmB"
                     /locus_tag="PXB09_000858"
     CDS             complement(3621..4370)
                     /gene="trmB"
                     /locus_tag="PXB09_000858"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDL5232996.1"
                     /translation="MSEKQTFADKKRKTVEQAEFTEDGRYLRKVRSFVLRTGRLSDYQ
                     RDMMNNNWANLGLDYQPMPFNFEQIFGNNNPVVLEIGFGMGKSLVEMAEQNPNRNYIG
                     IEVHTPGVGACIAYALEKGVKNLRVICHDATEILRDSIADGTLGGLQLYFPDPWQKAK
                     HHKRRIVQPEFISRVIRKLSPNGFIHFATDWENYAEHMLEVLRQFESELQNTSATNDF
                     IPRPNFRPLTKFEERGHRLGHGVWDLYFTKK"
     gene            complement(4380..5330)
                     /locus_tag="PXB09_000859"
     CDS             complement(4380..5330)
                     /locus_tag="PXB09_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDL5232997.1"
                     /translation="MNSRILATGSYLPTKVRTNADLEKMVDTSDEWIVTRSGIRERRI
                     AEPDETVATMGAKAAQQALEMAGIEANDIDLIVVGTTTNSHAYPSAACQIQGLLQIED
                     AIAFDVAAACTGFVYALTVADQFVRNGQVKKALVIGSDINSRMLDETDRSTVVLFGDG
                     AGAVILEASEELGIISTHLHASPDLENNLTLRSQKRGEERSGFIEMQGNATFKIAVNQ
                     LSSVVEETLEANNLQKSDLDWLIPHQANLRIITATAKKLEMEMDQVVVTLDKYANTSG
                     ATVPVALDEAVRDGRIQRGQLLLLEAFGGGWTWGSVLVKF"
     gene            complement(5476..6495)
                     /gene="hemB"
                     /locus_tag="PXB09_000860"
     CDS             complement(5476..6495)
                     /gene="hemB"
                     /locus_tag="PXB09_000860"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDL5232998.1"
                     /translation="MQVIQSQYPLRRMRRLRKHDFSRRLVAENQLTVNDLIYPVFVIE
                     GENQRVQVPSMPGVERLTIDQLLVEAAELVKYGVPAVALFPVVGDVKKSLMAEEAYNP
                     QGLAQRAVRALKAQFPELGVITDVALDPFTTHGQDGIIDETGYVLNDVTTEVLVKQAL
                     SHAEAGADIVAPSDMMDGRIGKIREALEQNGFINTQIMAYSAKYASNYYGPFRDAVGS
                     AGNLKGGNKYTYQVDPANGNEGLHEVAMDIQEGADMVMVKPGMPYLDMVWRVKENFGV
                     PTFAYQVSGEYAMHMAAIQNGWLKERECIMEGLLCFKRAGADGILTYFAKRVAKWLYE
                     EAQAK"
     gene            complement(6576..7331)
                     /gene="tatC"
                     /locus_tag="PXB09_000861"
     CDS             complement(6576..7331)
                     /gene="tatC"
                     /locus_tag="PXB09_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDL5232999.1"
                     /translation="MSQVDESQPLITHLIELRNRLLRSFICVLLVFCGLVYWANDIYT
                     LLATPLTDNLPDGATMIATNVATPFFTPIKLTIVVSVFLSVPFILYQIWAFVAPALYK
                     QEKRLVYPLLVSSTLLFYCGVAFAYYVVFPLVFGFLTSTAPEGVTMATDISSYLDFVL
                     TIFMAFGICFEVPVAIILLCWAGVTTPEDLKAKRPYIIVAAFVIGMLLTPPDIFSQTL
                     LAIPMCLLFEVGVLFARFYRPKDDDEPSEQVAQ"
     gene            complement(7318..7962)
                     /gene="tatB"
                     /locus_tag="PXB09_000862"
     CDS             complement(7318..7962)
                     /gene="tatB"
                     /locus_tag="PXB09_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDL5233000.1"
                     /translation="MFDIGFSELVLIMIVGLVVLGPKRMPIAIRTVMGWVSTIRGLAA
                     NVQNELAQELKLQELKESIKKAEELNLSSLSPELNKTVEDLKMSATQLQDSLNSAKNE
                     LEKTAAESSTIPKLTDEQVAEIQQKIEQESQVLEAQELQKNAQNKPLEVDSLSEQLNV
                     TRTEKPLSADELAEQAEMDESLLTLESYYPPDDDLATPQSSESAQKSEANNVAS"
     gene            complement(7966..8187)
                     /gene="tatA"
                     /locus_tag="PXB09_000863"
     CDS             complement(7966..8187)
                     /gene="tatA"
                     /locus_tag="PXB09_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDL5233001.1"
                     /translation="MGGISIWQLLIVVAIIVLLFGTKKLRTLGSDLGESVKGFKKAMA
                     DEKKDAEFEKVEAKDAISAEQKAKEKEQA"
     gene            complement(8298..9935)
                     /gene="ubiB"
                     /locus_tag="PXB09_000864"
     CDS             complement(8298..9935)
                     /gene="ubiB"
                     /locus_tag="PXB09_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDL5233002.1"
                     /translation="MNIKNLNRFYHIIRTFLRYGIDEAIPNLPITRKIKLGRKALFWV
                     KNQHSDKPYGVRLRLALQELGPVWIKLGQMLATRRDLFAPELADQLALLQDNVEPFDG
                     KIARQIIEQALGGKLETWFENFDETALASASIAQVHTAKFNQNQPLAGKDVVLKVIRP
                     GIEPVIKADLELMYEIAHFIPKLSNDGKRLRAVEVVREYEKTILDELDLRKEMHNAIR
                     LRANFENSEMLYVPEMYQDFCHKNLIAMERIYGIPVSNIAELEANSTDMKLLAERGVQ
                     VFFTQVFRDSFFHADMHAGNIFVNREHPENPQYIGIDCGIVGTLNHNDKRYLAESFVA
                     FFNRDYRRVALMHVESGWTPPDTDIDKFEQAFREVCEPIFAKPLSEISFGHVLLNLFN
                     VAREFNMEVQPQLVLLQKTLLYIEGLGRQVYPQLDLWQTAKPFLQNWLNEQVGVKAMV
                     RDIKQRLPQYREHFAEFPEALFKALQEQKQINFRLAEINESLKAQNSNANSRFLVLSI
                     SAIVICGAFWKFESLPIWLSVPLLTLFPLVLILSQRK"
     gene            complement(10009..10986)
                     /locus_tag="PXB09_000865"
     CDS             complement(10009..10986)
                     /locus_tag="PXB09_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5233003.1"
                     /translation="MKQIIAQARENAVRAVDFQRVLMYWHIGKRIFEQEQQGQERADY
                     GTYLIKMLAKELEPEFGSGFCSRQLERYRQFYRAFPIATALRSQLNWTQYRRLIQISD
                     SDKREFYLAESCKNNWSSRQLERQINSSLYERLLLSNDKESVLAVARNEQQPVDPKQL
                     IKDPMVLEFLGLKRESAYYEKDLEQAIITHLQDFLLELGNGFSFIARQKRLHLDGDDF
                     FVDLVCYNRLLQCFVIFEIKTHKLTHQDLGQLQMYVNYFDRVEKLPHENATIGVLLCA
                     DKNDAVVKFSLPENQNKIFASQYQLYLPSEQTLIAEVQKEIENFEQKYP"
     gene            complement(11147..11794)
                     /locus_tag="PXB09_000866"
     CDS             complement(11147..11794)
                     /locus_tag="PXB09_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDL5233004.1"
                     /translation="MLNNVKQQLMLPQFTFGLIETAFNALLKRSPHIEPNLRKLSGKV
                     LKIALTSPKIDFFVLFSESRTDWLGNYEGEADCTVQLAFDTLPKLADKQKLTELINNK
                     SLVLTGDIQVLQHFTALLEQLEKDPAELLSPFVGDVVAQTSTDLAKKLLGKVKAQFEQ
                     NNQHLVENLIQERPVLVHRLQAVHFYDQVEELAQQALKLEQKFTHYVRSSSHQQS"
     gene            complement(11985..12737)
                     /gene="ubiE"
                     /locus_tag="PXB09_000867"
     CDS             complement(11985..12737)
                     /gene="ubiE"
                     /locus_tag="PXB09_000867"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDL5233005.1"
                     /translation="MQQSAETTHFGFKTVAKEEKQQLVANVFHSVAGKYDLMNDLLSF
                     GIHRVWKRFTIDCSGVRKGQKVLDLAGGTGDFTAKFSRIVGESGEVILADINSSMLEV
                     GREKLRNLGVVGNVSYVQANAECLPFADNTFDCIVISFGLRNVTDKDKALRSMFRVLK
                     PGGRLLVLEFSKPIIDPISQLYNFYSFNILPKVGEVVVNDAESYRYLAESIRMHPKQD
                     ELKAMMEQTGFESVNYYNLSAGIVALHRGYKF"
     gene            13082..14035
                     /gene="corA"
                     /locus_tag="PXB09_000868"
     CDS             13082..14035
                     /gene="corA"
                     /locus_tag="PXB09_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDL5233006.1"
                     /translation="MIRAFGLDNACLISVDETNPTLLNDAIWIDLIDPSEAERTVLEN
                     RLDQTLAEERELEDLEASARFFEDEDGLHLHSFFYCLDDDDYADIATVAFTIRDGRLF
                     TLRDRDLPAFRLYRMRSRREKLIDSNAYELLLDLFETKIEQLADVIEEVYADLEKLSR
                     VILNGQQENENFNDALSRLTEFEDASSKVRLCLMDTQRALSFLLRKTRLPNNQLEQAR
                     DIMRDIESLQPHNESLFQKVNFLMQAAMGYINIEQNRIMKFFSVVSVMFLPATLVAST
                     YGMNFEFMPELHFQYGYPMAIGLMIVAASAPYLYFKRKGWL"
     gene            14188..15993
                     /locus_tag="PXB09_000869"
     CDS             14188..15993
                     /locus_tag="PXB09_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDL5233007.1"
                     /translation="MLSKLQRFTLMIKSTIIKHPLEILFVTYVTILLINNVSDYELIK
                     RFQNLIALFPICFILLYLIRDTKAYWLFAPIPIAIVFFFGQINLTLLEDSRYWATIFC
                     VFLCLISQYWYKNNHYFVAGTTNKLVNIVFATVLSGIIFATLSAITIAIIALFDLNKQ
                     NNFHIFEKFGIFSSFWAFPVLFLTLEQQTTNDSRYLNRISEMLLNWILSPALIIYTAI
                     IYAYVIFIAAKGQMPDGVVANVALPYLAFGLAIQAVQLLLKNAKWQWFYSHFTYLALL
                     PLTLIWYAIYIRFSHYGLTEARIYLVIGTITLSICYTLLLFKQLAQYRLFSAVSIAII
                     LISVFILDPKTVALKDQTKRLDNYLLKHKLLDVNNKISTKAVLKYQESLNENRDEAEY
                     FYSMLHYVARGMPAAQFKEKYGVNSSYDLMSEIRERNTDPRYFEATNSELVRLTKADM
                     ANAREYITFSSQLYRPNSFSHQKIENKLCQKLLSQGYYFEGNILNIEYQYSETAQDCS
                     SITQDPTEFVIYFKGLGTTIEFNINDILKKIFAKHQLSITQQHKNEVLEKIKGDLLKM
                     DLGNSVLGLKHIELRFEDNIGYIVESISTQYIMLK"
     gene            complement(16036..19065)
                     /locus_tag="PXB09_000870"
     CDS             complement(16036..19065)
                     /locus_tag="PXB09_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4981 domain-containing protein"
                     /protein_id="HDL5233008.1"
                     /translation="MSLPNYYQDPSVLHLNTTLHHAYFIPFAKGQTPNQLEREQSELF
                     TLLNGDWKFNFYPSPHDLPEDFLNTKFTHQIPVPSNWQTQGFDAHQYTNINYPIPFDP
                     PYVPHQNPCGVYQREITFNPKPNKRYLLNFEGVDSCLFVYVNGEFVGYGQISHSTNEF
                     DITKQLKQGKNSLVVVVLKWCDGSYLEDQDKFRMSGIFRDVYILEREQNYLQDFFIRY
                     QLNADLSKAELKVETQFSTYTEAVHFQLFDPENRLVCEQTSGDFCQEICNLCLWNAED
                     PTLYTLCLSYQNEIIEQKIGFRQIRVENGVMLFNNAPIKFKGVNRHDSDPKTGYSISR
                     EQALVDLRLMKAHNINAIRTAHYPNAPWFSELCDQLGFYLIAESDLESHGSSAVYIES
                     PENSIFLNVPNPNKQEEIRQQAVDNFCYFARDPLFKQAILDRNIANVERDKNRTSVII
                     WSLGNESGFGENFEVAARWVKQRDPSRLTHYEGSIYQHSAHQNDLSNLDLYSEMYPST
                     ERLEEYFSDSANHKPFILCEYSHAMGNSSGDMEDYWQTFQRYSGACGGFVWEWCDHAP
                     LLPNSELSAEQKTEKYGYGGDFGETLHDGNFCMDGLVSQQRVPHSNLLEVKNVNRPVR
                     AELKAGKIWLKNQLDFSDLADYLTVHYCFSENGETTLQGQCLVNCQPNQTACLPLTLP
                     EPNGKLQLLTLDYSLNESTALLEKGHHLGFDQITLHQAMVTPALNPRPQAVIFVQDFA
                     NEWRIQQGDYRYTFDKLKGIFSRIEKNGEAVIEQPLDFNIWRAPTDNDRLIREFWKKA
                     GYDNCYTRAYHTELMQDKNGVNITAECGIVATAQSRILTLKVNYHLAPNGEMTIQVQA
                     TRPAHLPFLPRFGLRFFLNKRNNQVSYFGYGEQESYIDKYHLAKLGAYQTSARENHTD
                     YLKPQENGSHFGTHYVQANGITVTSPQPFSFNLSPYTQEELTTKSHSYDLVESPSTVL
                     CVDYKMSGIGSNSCGPNLKPQYRLNETNFEWLLKLSF"
     gene            19243..20100
                     /gene="menB"
                     /locus_tag="PXB09_000871"
     CDS             19243..20100
                     /gene="menB"
                     /locus_tag="PXB09_000871"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005723289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDL5233009.1"
                     /translation="MLYPSEEFLYAPVEWVDHSEGYTDIRYHKSKDGIAKITINRPEV
                     RNAFRPQTVKEMIEAFSDARFDEKIGVIVLTGEGEYAFCAGGDQKVRGDYGGYKDESG
                     VHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGGHVLHMLCDLTIAADNAKFGQTGPKVG
                     SFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLINTVVPYADLEKETVRWC
                     REMLQNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREP
                     DFSKFRRNP"
     gene            20183..22585
                     /gene="mrcB"
                     /locus_tag="PXB09_000872"
     CDS             20183..22585
                     /gene="mrcB"
                     /locus_tag="PXB09_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDL5233010.1"
                     /translation="MSDVELNEQSEQEPEQKPKKRNYFLSTLFKIGVIGACSMAFYGI
                     YLDGKIRSKMDGQIWELPAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPG
                     DFKIEENQLVLLRRAFPFPETPESQRVLRLTFKQDKLTYIEDLVQGKLIEEFRLDPKL
                     LALLHSDSDEERQALRLQQYPRLLIESLILTEDRRFYQHDGISPIGIARALITNYQAG
                     RTVQGGSTLTQQLVKNLFLSNERSLVRKVNEALMSVILDFRYDKNRILETYLNEIYLG
                     QNGSYQIHGFALASQFYFGRPIQEISLDQIALLVGMVKGPSLYNPWRNPQGAVERRNV
                     VLRLLLDHQVINQELYALLSSRPLNIREKGTIYREQPAFMQALTIDLKNELGEIKSAQ
                     LSGTKIFTTLDRKQQRSAEQAVITGLEDLESKNKKVSDLQSAIVVAEYRTGKVRAIVG
                     DRLTQFAGFNRAIQSKRQIGSLVKPSVYAIALAQPELFRLNTPIQNKQISIKVGSTYW
                     TPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMKVGLKKVIAKQKEMGWDNAEIPPYPS
                     TLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAIISHNGEMFYQRDSGKVSEQVLPP
                     EAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGTTNNARDTWFVGIDGEHVTTVW
                     LGKDNNGDTNLTGSSGALYVYKQYLERALPQAYRLPKLNTMQWVGINSYGSWNCDSGR
                     QIPVWRDKGQRYCTSAGNVVATEKPSVWDALSLKKENIEAKAEEAEGKQPIPTEEVAP
                     IE"
BASE COUNT         6527 a         4865 c         4603 g         6669 t
ORIGIN      
        1 tgcaagcggt caattttccc cttaaatttg caaaaaattt attttaccaa ttaaaaggaa
       61 atgattatgt tgaaaaaatt atcaattgct gcattagctc ttaccctttc tgtttctgca
      121 tttgctaaag agagcctact tgagcgtata aacaacaaag ggactattac tgtgggtacg
      181 gaaggaactt atgcccctta cacctatcac gatgcgagcg gtaaattaac cggttacgat
      241 gtagaagtaa cccgtgcggt ggctgaaaaa ttagacgtaa aagtggaatt taaagagaca
      301 caatgggacg ctatgttagc cggtttaaaa ggtgagcgtt ttgacttagt ggcaaaccaa
      361 gtggctttaa ccagcccgga acgtcgagcg acatttgata aatccgaatc ttacagctgg
      421 gacggtgccg ccttattagt gcgtgaagat gaaactaaaa tcaaaacccc tgctgatgta
      481 aaaggcgtga aaactgccca aaccttgagc tcaaactatg gcgagattgc ccgtgaaaac
      541 ggtgcagaca tcgtgccaat tgacggtatg gctcaaggct tactgttaat tcaacaaaaa
      601 cgcgccgatg caactttcaa tagccactta tcgctattag attacttgaa aaagaacccg
      661 aattccggct taaaaattgt gtgggaaaaa gaagaaaaag tgggtgcagg cttaattgcg
      721 aataaaggca atgacgaagc attagcgaaa atcagcaaag caatcgtaga attacgtgaa
      781 gacggcacgt taaaaaaatt gggcgagcag ttcttcggta aagatattag tgtacaataa
      841 tccatattgg attaggcttg gggcgaattc gcccctttta tttttaaatc tccctcaaaa
      901 cgggagattt taggtttttc agatgttaaa cgatctactt ctctcaatcc cctttatgac
      961 ccaagctcgg gtcgatttag tgctaagcgg tttttggccg atggtacaag cggcattttt
     1021 agtctctatt ccgctggcaa tcgcctcatt tattatcggt atgttaattg ccgttgcagt
     1081 tgcattagtg cgaattagcc ctgcaacagg cttttttcac cgcttgctac tgtggctggt
     1141 aaaaggttat atctcgatta ttcgcggcac gccgatgttg gttcagatct gtattgtgtt
     1201 ttatggtttg cctgcaatcg gcatttttat cgatccgatt ccggcggcaa ttatcgggtt
     1261 ttcactcaat atcggggctt atggctcgga aacgatccgt gctgcgatct cctccgtgcc
     1321 aaaaggacaa tgggaagccg gttatactat cggtatgact tatatgcaaa cttttcgccg
     1381 tatcattgcc ccgcaagcgt ttcgagttgc tgttccgcca cttagcaaca cctttatcgg
     1441 tctgtttaaa gatacctctc ttgcctccgt tgttaccgta accgaaatgt tccgggttgc
     1501 tcaacaggta gcaaatatgt cttatgactt cctacctgtt tatattgaag ccggtttgat
     1561 ttattggtgc ttctgctggg tgctattttt aattcaggcg agattggaag tccgctttaa
     1621 ccgatttgtg gcgaaataag gaggaattgt gcttaaaatt cgcaatattc ataaaacctt
     1681 tggcaacaac gctattctac gcggcattga tttagatatt caaaaagggc aagtggtagt
     1741 aattttaggc ccttccggtt caggcaaaac cacctttctt cgttgcttaa atgcactgga
     1801 aatgcccgag caaggcacat tggaatttag tggtaatgct ccgctgaaaa ttgattttgc
     1861 cgtaaaacag agcaaaaaag agattttagc gctacgccgc aaatccggta tggtgttcca
     1921 aaactacaac ctgttcccgc ataaaaccgc attggaaaat gtgatggaag gaccggtatt
     1981 tgtgcaacaa caagcggtcg aaattgctca aaaaaatgca aaagccctgt tagaaaaagt
     2041 cggactggcg gataaagcag aactctaccc gtttcaactg tcaggcgggc aacagcaacg
     2101 ggttggcatt gcacgagcat tagcaattca gccggagctg atgttatttg atgaaccaac
     2161 ttcggcactt gatcctgagt tagtgcaaga cgtgctaaat acgatgaaag aactggcaaa
     2221 tgaaggctgg acaatggtcg tggttactca cgaaatcaaa tttgcccttg atgttgccga
     2281 tgtagtggtg gtaatggacg gcggtgaaat cgttgaacaa ggctcgccac agcaactgtt
     2341 taaccaccca caacacgaac gaactaaacg ttttttaaat caaatcagag cggataaata
     2401 agaaacgata gcgctagcgt ccacgctagt gctatctaat aaatggtaca agcggttaat
     2461 tatgtataaa ttgttatact gttttggcac gagcgtggac gctcgcgcca tcgtacagta
     2521 aaatcagcta acaaggttcc ccataaagga taaataagac aaggctcctt aatcttttag
     2581 attaaggagc ttatttttag attttagaaa tccgatttaa gccgcagccc atagtccacc
     2641 aaaaatttgg tagaacaagc tatttagtag caataagccg aaacctagca ccattaccga
     2701 gaaatctaac attcccgttc ttggcaggag cttgcggata aaacctaaca ccggttcggt
     2761 aatttgtgct accgtgtagt ctaatgggtg gttgccttga gtgacccagc tcattaatgc
     2821 acgaatcaag gtggtgaaaa atagaatttg tccgaaggtt ttgaccacac ttaataagcc
     2881 gattaatact gctctgggta aatctacgcc aaacagaata aactgtaacg ttaccaaagc
     2941 ggcggcaatt aatagtgccg gaaagcaaat atttttaacg gttggaatca gcttgccaac
     3001 cggtgaaacc atcggttcgg taattttaag taaggtttgt gaaatcggta aacgaggatc
     3061 aacccgacaa aattgcagcc aagttcttag caccagcaca aaacttaaaa agccaacaat
     3121 aagcgaaata acaggagcta aaaattccat ctctttttct ctttctatac aaaacaagcg
     3181 gtcgtttttt agaaaaaatt tgcaaatttt cagtaaaatc tgaccgcttg tatcttatta
     3241 aattaactag gcaaattaag cttgtgctgg gtagtcccac caaatatcaa ataattcgct
     3301 cacttgaacc tcttttaagc cgttagtttc taaccaagtt ttcactaatt ggcggtgaga
     3361 ttcatcacat ttgcctaatt tttctaagca gactaaacct tcccagttta agtagccgtt
     3421 cgcttcaagg gctaaaccgt ttggtcgaat cacttcatcg ataaaacgat ctacggtttc
     3481 atcaatttgg tcaatgcctg tgccttcagc aaaggtgaat ttaattaaga aacctaattc
     3541 ttggtattca cctaagtgca tttttttacg ttggcgtgcg ttacgttgaa tagccatttt
     3601 ttctctcctc tatgaataaa tcatttcttt gtaaaatata aatcccacac cccgtgtcct
     3661 aaacgatgcc ctcgctcttc aaatttggtt agcgggcgga aattcggacg tggaataaaa
     3721 tcattagttg ctgatgtatt ttgcaactcg ctctcaaatt ggcgtaatac ttcaagcata
     3781 tgttctgcgt aattttccca gtcggtggca aaatgaataa agccgttagg gcttaatttt
     3841 ctgatcacac ggctgataaa ttcaggctgc acaatacggc gtttgtggtg ttttgctttt
     3901 tgccaagggt ctgggaagta aagctgtaag ccacctaatg taccgtcagc aatgctgtct
     3961 cgcaaaattt cggtggcatc gtggcaaatt actcttaaat tcttcacgcc tttttctaac
     4021 gcataagcga tacaagcccc caccccgggc gtgtgcacct caatgccgat atagttgcga
     4081 ttcgggtttt gctctgccat ttccaccagc gattttccca ttccgaagcc gatttctaac
     4141 actaccgggt tgttattgcc gaaaatctgc tcaaaattaa agggcattgg ctggtaatct
     4201 aagcctaaat ttgcccagtt gttgttcatc atatcacgtt gataatcgct caaacgaccg
     4261 gtacgcaata caaaactccg cacttttcgt aaataacgcc catcttcggt aaactcggct
     4321 tgctcaacgg ttttacgttt tttatctgca aaagtctgtt tttctgacat tttcttgcct
     4381 taaaacttca ctaataccga accccaagtc cagccaccgc cgaatgcttc aaggagtagt
     4441 aattgcccac gttgaattcg cccgtcacgc accgcttcat ctaatgccac cggcactgtt
     4501 gctccactgg tattggcata tttatcaagg gtaaccacca cttgatccat ttccatctct
     4561 aattttttcg ccgttgcggt gataatgcgt aaattcgctt ggtgcggaat cagccaatct
     4621 aaatcggatt tttgtagatt attcgcttct aaggtttctt ctaccacgct tgaaagttgg
     4681 tttactgcaa ttttaaaggt ggcattgccc tgcatttcaa taaagccgga acgctcttcg
     4741 ccacgctttt ggcttcttaa ggttaagtta ttttctaaat ccggtgaggc gtgcaagtgg
     4801 gttgaaataa tacccagctc ttcactcgcc tctaaaatca ccgccccagc tccgtcacca
     4861 aataatacta ctgtgctgcg gtcggtttcg tctaacattc tggaattgat gtctgaacca
     4921 ataaccaatg cctttttcac ttgcccgtta cgcacgaatt gatcggcaac agttaaagca
     4981 tacacaaatc ctgtacaagc cgctgccaca tcaaaagcaa tcgcgtcttc aatctgaagc
     5041 aagccttgaa tttggcaagc tgcacttggg taagcgtggg agttggtagt tgttcccacc
     5101 acaattaaat caatgtcatt tgcctcaatt cctgccattt ccagtgcttg ttgagcggct
     5161 tttgccccca ttgttgccac tgtttcgtca ggctcggcaa tacggcgttc acgaatgccg
     5221 gaacgggtta cgatccattc atcagaggta tcgaccattt tttctaaatc agcattggta
     5281 cgcacctttg tcggtaaata gcttcccgtt gctaaaattc tactattcat atttttatta
     5341 ttctcaatca attaaatgat aatccgttat tatagcttga aaaccaacaa atatataggc
     5401 tttacaagcg gtcattttta gcaaaaaagt tgcattcacg aacgattttg cactagaacc
     5461 accgcttgct agtatttatt tcgcttgagc ctcttcgtat agccacttcg ctactcgctt
     5521 ggcgaaataa gttagaatac cgtctgctcc tgcccgttta aagcagagta atccctccat
     5581 aatgcactca cgctctttca gccagccgtt ttggattgcc gccatatgca tcgcgtattc
     5641 gcccgaaact tggtaggcga aggttggcac gccaaaattc tctttcacac gccacaccat
     5701 atccaaataa ggcatacccg gtttcaccat caccatatct gccccttctt gaatatccat
     5761 cgccacttcg tgcaagcctt cgttgccgtt agccggatcg acttggtaag tgtatttatt
     5821 accgcctttt aagttgccgg cagaacctac tgcatcacgg aacggtccgt aataattaga
     5881 cgcatattta gccgaatacg ccataatttg cgtattgata aaaccgtttt gctcaagggc
     5941 ttcacgaatt ttgccgattc gaccgtccat catatcgctc ggggcaacaa tatccgcccc
     6001 cgcttctgcg tgcgataacg cctgttttac caatacttca gtagtcacat cattcagtac
     6061 atagcctgtt tcatcaataa tgccgtcttg tccgtgcgtg gtaaacgggt ctaacgccac
     6121 atcagtaatc acgcctaatt ccggaaattg agcttttaaa gctcgcacgg cacgctgtgc
     6181 caacccttgc gggttatagg cctcttctgc catcagtgat tttttcacat cacccaccac
     6241 agggaaaaga gccaccgcag gcacgccata tttaaccagt tctgcggctt caactaaaag
     6301 ctggtcgata gttaaacgct ctacacccgg catagaaggc acttgtactc gctgattttc
     6361 cccttcgatg acaaaaacag ggtaaatcaa atcattaacg gtaagttgat tttctgccac
     6421 taagcggcgg ctgaaatcgt gcttgcgtaa acgacgcata cggcgtaaag gatattggga
     6481 ttgaattact tgcattttta atttcctaat tcttaaaata cctattcttg aaataagaaa
     6541 ggcatagcaa acaggtgcta tgccttttca aaatattact gtgcaacctg ctctgatggt
     6601 tcatcatcat ctttggggcg ataaaaccga gcaaatagca caccaacttc aaacaataaa
     6661 cacattggaa ttgccaataa tgtttgcgag aaaatatctg gtggggtgag caacatacca
     6721 attacaaatg ctgccacaat aatataaggg cgttttgcct ttaaatcttc gggtgtggtt
     6781 acgcctgccc aacataacaa gataatcgca accggcactt caaagcagat cccgaatgcc
     6841 ataaaaatgg ttaaaacgaa atcaagatag ctactaatat ccgttgccat tgttacccct
     6901 tccggagcgg tagaggttaa aaagccaaat acaagcggaa atacaacata ataggcaaaa
     6961 gcgacaccac aataaaacag caatgtgcta gataccaata atgggtaaac caaacgcttt
     7021 tcctgcttgt ataaagcagg ggcgacaaac gcccaaattt ggtacaaaat aaaaggaact
     7081 gataaaaaca ccgaaaccac aatggttaat ttaattgggg taaaaaacgg agtggctaca
     7141 ttggttgcaa tcattgttgc accgtctggt aaattgtccg ttaaaggtgt tgccaataag
     7201 gtgtaaatat cattggccca gtaaaccaat ccgcaaaaca ccaagagcac acagataaaa
     7261 ctacgcagta atcggtttct cagctcaatt aaatgtgtaa tcagaggttg agactcatca
     7321 acttgcgaca ttatttgcct ccgatttctg cgctgattct gatgattgag gcgtagctaa
     7381 atcatcatct ggcggatagt aagattccaa cgttaaaagc gattcgtcca tttctgcttg
     7441 ttcagccagc tcatcagccg aaagtggctt ttctgtccgc gtaacattaa gttgctcaga
     7501 taaactatcc acttcaagcg gtttattttg cgcatttttt tgcaattctt gcgcctctaa
     7561 cacctggctt tcttgctcga ttttttgctg aatttctgcg acttgctcat cggttaattt
     7621 aggaattgtg ctgctttccg cagccgtttt ttccaactca ttttttgcag aattaagcga
     7681 atcttgcaac tgggtggctg acattttcag atcttccacc gttttattta attctggcga
     7741 aagggagctt aaattcaact cttctgcctt tttaatgctc tcttttaatt cttgcagttt
     7801 cagctcttga gccagttcat tttgtacgtt tgcggctaaa cctcgaattg tactcaccca
     7861 gcccattacg gtacgaatcg caatcggcat acgtttcggg cctagcacca ccaagcccac
     7921 aatcataatc agtactaatt cagaaaaacc tatatcaaac acggattaag cctgctcttt
     7981 ctcttttgct ttctgctctg ctgaaattgc atcttttgct tccacttttt caaattcagc
     8041 atcttttttc tcatctgcca ttgctttttt gaagcctttt acagattcgc ccaaatccga
     8101 acctaaagta cgtaatttct tcgtaccgaa aagtaatacg atgattgcaa ccacaatcag
     8161 aagctgccaa atactaatac cgcccataaa aactcctttc atttaatagg gaatagataa
     8221 aataaaacgc tgtttattat atgttacttt gacatataaa aaagtaattt tgcaaaaaat
     8281 ttgtcaaaaa caaccgctta tttgcgttga ctcaaaatca ataccagtgg aaataaagtt
     8341 aataacggca cacttagcca tatcggcaaa gattcaaatt tccaaaatgc gccacagatc
     8401 acaatcgctg aaattgacag cacaagaaaa cggctatttg cgtttgaatt ctgtgctttt
     8461 aaactttcgt taatttccgc taaacggaaa ttaatttgct tttgctcttg taaggcttta
     8521 aacaatgcct ccggaaactc cgcaaaatgc tcccgatatt gcggtaaacg ttgcttaatg
     8581 tctcgaacca tcgctttcac acctacctgc tcattcagcc agttttgtaa aaacggtttt
     8641 gcggtttgcc ataaatccaa ctgtggataa acctgcctgc ccaaaccttc aatataaaga
     8701 agtgtttttt gcaacaacac caactgcggc tgcacttcca tattaaattc tcttgccaca
     8761 ttaaacaggt tgagcaaaac gtgtccgaat gaaatttccg ataacggctt agcaaaaatc
     8821 ggctcacata cctcacgaaa ggcttgctca aatttatcaa tatcggtatc cggcggcgtc
     8881 cagcccgatt ccacgtgcat taaggcaaca cggcggtaat ctcggttgaa aaatgcgaca
     8941 aaactttcgg ctaaatagcg tttgtcattg tggttcaacg tgccgacaat cccgcagtca
     9001 atgccgatat attgcggatt ttccgggtgt tctctgttca caaaaatatt gccggcgtgc
     9061 atatcggcgt ggaaaaaact gtcacggaat acttgggtaa aaaatacctg cacaccacgc
     9121 tctgccagca atttcatatc ggtgctgttc gcttccaact cggcaatgtt agacactgga
     9181 atgccataaa tccgctccat cgcaatcaag tttttatggc aaaaatcttg atacatttca
     9241 ggcacataca gcatttcgct attttcaaaa ttcgcccgaa gccgaatggc attgtgcatt
     9301 tctttgcgta aatccagctc gtctaaaata gttttttcgt actctcgcac cacttcaacc
     9361 gcccgtagcc gtttgccgtc attcgataat ttcgggataa agtgagcaat ttcatacatc
     9421 aactctaaat ccgccttaat caccggctca atgcccgggc gaatcacttt taacaccaca
     9481 tctttgcctg caagcggttg attttggtta aattttgccg tgtgaacctg tgcaatcgaa
     9541 gcagaagcta aggcagtttc atcaaagttt tcaaaccaag tttcaagctt tccgcccaaa
     9601 gcctgctcga taatttgacg agcgattttg ccgtcaaacg gttcaacatt atcttgtagc
     9661 aaggcgagct ggtcggcaag ctccggtgca aacagatcac gtctggtagc taacatttgc
     9721 ccgagcttga tccaaaccgg tccaagctct tgcaaagcca aacgtaaacg tacaccgtaa
     9781 ggtttgtctg aatgttgatt cttcacccaa aacaaagcct tacgccctag ctttattttg
     9841 cgggtaattg gcagattcgg aatggcttca tcaataccat agcgaagaaa agtgcggata
     9901 atatggtaaa agcggttgag atttttgatg ttcattgaaa tatatattta atggtaatta
     9961 ggaagatttt agcaaaattc tgtaaaaatt taaccgcttg ttgggctact atgggtattt
    10021 ctgctcaaaa ttctcaattt ctttctgtac ttccgcaata agtgtttgtt cagaggggag
    10081 gtaaagttgg tattggctgg caaaaatttt attctgattt tccggtagcg aaaattttac
    10141 caccgcatca tttttatcgg cacaaagcaa gacaccaata gtggcatttt cgtgcggcag
    10201 tttttcaact cggtcaaaat aattgacgta catctgtaat tgccccaaat cttgatgggt
    10261 gagcttgtgg gttttaattt caaaaatcac aaaacattga agtaaacggt tgtaacaaac
    10321 caaatcgaca aaaaaatcat caccgtctag gtgcaaacgc ttttggcgtg cgataaacga
    10381 gaaaccgtta cccaattcta gtagaaaatc ctgcaaatgc gtaatgatgg cttgctctaa
    10441 atccttttcg taataagcac tttcccgttt tagtccgaga aattccaata ccatcgggtc
    10501 tttaatgagc tgtttcggat caaccggctg ctgctcattt ctggcaacag caagcacact
    10561 ttccttatca ttactgagca ataatcgctc gtatagacta ctattaattt gccgttccag
    10621 ctggcgtgaa ctccaattat tcttacaact ttcagccaaa taaaattccc ttttgtcaga
    10681 atcggagatt tgaattagac gacgatattg tgtccaattc aattgcgacc gcagtgcggt
    10741 cgcaattgga aacgcacgat aaaactggcg ataacgctct aattgacggc tacaaaaacc
    10801 acttccaaat tctggctcaa gctcttttgc gagcatttta atcaggtatg ttccataatc
    10861 agcacgctct tgcccttgtt gctcctgttc aaaaatccgt tttccgatgt gccaatacat
    10921 cagcacacgt tggaaatcta ccgcacgaac cgcattttca cgagcttgag caataatttg
    10981 tttaatatct tagatcatcg ttgtttctat taacataaaa gcctccgttt tggattaagt
    11041 ttatgcttaa tctatccgga ggcaatttct ttcactcaac ttttcgagtc atatcacaat
    11101 tttattttgt taaatttaat tttgcacaaa cgcttgcgtt tgaacatcag ctttgctgat
    11161 ggctcgaaga gcgaacgtag tgagtaaatt tttgctctaa tttgagcgct tgttgggcaa
    11221 gttcttcgac ttggtcatag aaatgcaccg cctgtaaacg atgcaccaac accggtcttt
    11281 cttggattaa attctcaacc aaatgttgat tattttgctc aaattgagct tttactttac
    11341 ctagcaattt tttagcaaga tcggtgctag tttgagccac tacatcgcca acaaaagggg
    11401 aaagcagttc ggcagggtct ttttcgagct gttcaagtaa tgcagtgaaa tgttgcaaca
    11461 cttgaatatc gcccgtcagc accaacgatt tattattaat cagctcggtt aatttttgct
    11521 tatccgctag tttcggcagg gtgtcaaatg ccagttgcac cgtacaatct gcttccccct
    11581 cgtagttgcc aagccaatcg gttcggcttt cgctaaacaa cacaaaaaag tcgattttag
    11641 gcgaagttag ggcgattttt agcacttttc cggacaattt acgcaaattc ggctcaatat
    11701 gaggcgagcg tttaagtaac gcattaaaag cggtttcaat cagaccaaag gtaaattgcg
    11761 ggagcattaa ttgttgtttt acattattta acattcgtac ctacttaccc tcttcacttt
    11821 tgggagaagg atagattgtt cttcattaag aagcaaaatc agggagaggg gtatttgcaa
    11881 aatattgaat aaatatgacc gcttgccccc tctctctgct tatttcgcta aacgctcata
    11941 agcggtctct ctcccacaaa gggagagagt catttaagag aaaactaaaa tttataacct
    12001 ctgtgtaatg ccacaatgcc ggcacttaag ttgtagtaat tcacgctttc aaagccagtt
    12061 tgttccatca ttgcttttag ctcgtcttgt ttcgggtgca ttcggatcga ttcagctaaa
    12121 tagcggtaac tttcggcgtc atttaccacc acttcgccca ctttcggcaa aatattgaat
    12181 gagtagaaat tataaagctg gctgattggg tcgataatcg gttttgagaa ttccaacaca
    12241 agtaagcgac cgcccggttt tagcacgcgg aacattgaac gtagggcttt gtctttgtcg
    12301 gtaacattac gcaagccaaa actaatcaca atacaatcaa aagtgttatc agcaaaaggc
    12361 aagcattcgg cattcgcttg aacgtagctc acatttccaa ccacgcctaa attgcgtaat
    12421 ttttcccgcc cgacttccaa cattgagctg ttaatatcgg ctaaaatcac ctcaccactt
    12481 tcaccaacaa tgcgagagaa ttttgcggta aaatcacccg tgccgccggc aagatccagc
    12541 actttttgcc ctttacgcac gccactgcaa tcaatggtaa agcgtttcca cactcgatga
    12601 atgccgaaag aaagcaaatc gttcattagg tcatatttgc ctgccaccga gtgaaacaca
    12661 tttgcgacca gttgctgttt ttcttctttc gctacggttt taaacccaaa gtgggtggtt
    12721 tctgccgatt gttgcacttc ttgttgcact tcatctttag gtgctaattg ttctacatcg
    12781 ctcattttct tgtctctagt tgcaaaattt aggcgtaacc atagcaaaaa agcggtcgtt
    12841 tttctttaac tttttgcaaa ttttcttaag taaataaccg ctttcttgac tagaaaagcc
    12901 aaattctgta acattcgcac actatttttt cttgaggatt acacattttg gacagtcata
    12961 gtcgatactt acccgtttaa cctatcttgt ctaacctcaa tgttaccgac aaggtcggta
    13021 atgctcgcct agtatctttg ttcctttttg ttccaagcct cctaactatt tggagctaaa
    13081 catgatccgt gcttttggac tagataacgc atgtttaatc agcgttgatg aaactaaccc
    13141 aactttatta aatgatgcga tttggattga tctcatcgat ccatcagaag ctgaacgaac
    13201 cgtattagaa aaccgcttag accaaacact cgctgaagaa cgtgaattgg aagacttaga
    13261 ggcgtctgcc cgtttctttg aagatgaaga cggtttgcac ctgcactcgt tcttttactg
    13321 cttagatgat gacgattacg ccgatattgc cactgtcgcc ttcactattc gtgacgggcg
    13381 tttgtttacc ttgcgtgatc gggatttacc cgcatttcgc ttgtatcgaa tgcgttcccg
    13441 ccgtgagaaa ttgattgaca gcaacgccta tgaactctta ctcgatttat ttgagaccaa
    13501 aatcgagcag cttgcagacg taattgaaga agtctatgct gacttagaaa aattaagtcg
    13561 ggttattcta aacggtcagc aagaaaatga gaatttcaat gatgcccttt ctcgcttaac
    13621 tgaatttgaa gatgcaagtt caaaagtgcg tttatgtttg atggatacgc aacgggcgtt
    13681 aagtttctta ctgcgtaaaa cccgtttgcc gaataatcag ctagaacaag cccgtgacat
    13741 tatgcgagat attgaatctc tgcaaccgca caatgaatcc ttgttccaaa aagtgaattt
    13801 tttaatgcaa gcggcaatgg gttatatcaa tattgagcag aaccgaatta tgaaattctt
    13861 ctcggtggtg tcagtgatgt tcctacctgc tacgctggtt gcttctactt acggtatgaa
    13921 ctttgaattt atgccggaac ttcatttcca atatggctac cctatggcga ttggtttaat
    13981 gattgttgcc gcctccgccc cttatcttta ttttaaacgt aaaggttggt tataatttat
    14041 ttttaaagcc tatagttgaa taacttaggc tttcttattt taatgaatat gttcacctct
    14101 aaaaacaaat aaagattaaa actgtttacc tattatttat tcacatatat actgtgagat
    14161 attcttttca taggcaggag atctattatg ctaagtaagc tacaacgctt taccttaatg
    14221 ataaaaagca ccatcattaa gcatccactg gaaattttat tcgttactta cgtcacgatt
    14281 ttacttatca ataatgtgag cgactacgaa ttaatcaaac gctttcaaaa tctaattgct
    14341 ctttttccta tttgctttat tttgctttac ctgatacgcg ataccaaagc ttattggcta
    14401 ttcgctccga ttccgatagc aatcgtcttt ttctttggtc aaattaattt aacattattg
    14461 gaagattctc gttattgggc taccatattt tgtgtattcc tttgtttgat cagtcaatat
    14521 tggtacaaaa acaaccatta ttttgtagcc ggaacaacta ataaattagt taacattgtc
    14581 tttgctacag ttttatctgg cattattttt gcaacattaa gcgctattac catagccatt
    14641 attgctttat ttgatttaaa taaacaaaac aactttcata tttttgaaaa atttggcatt
    14701 ttttctagtt tttgggcatt ccctgtttta tttttaactc ttgaacaaca gactaccaat
    14761 gattctagat atctaaaccg cattagtgaa atgttactaa actggatttt gtctccggca
    14821 ttaattatct atactgcaat tatttatgct tatgtaattt ttattgcggc taaggggcaa
    14881 atgccagatg gggttgttgc aaacgtagcg cttccctatt tagctttcgg cctagctata
    14941 caagcggtgc aattattact aaaaaatgca aaatggcagt ggttttattc tcactttacc
    15001 tatttagcac ttttgccgtt aacattaatt tggtatgcca tctatattcg tttcagccat
    15061 tatggcttaa ctgaagcccg tatttattta gtgattggca caataacctt atctatttgc
    15121 tataccttat tactatttaa acagttggcg caatatcgtc tcttttctgc agtgtcgata
    15181 gcaattattt taatttcagt gtttatttta gatccgaaaa cagttgcgct taaagatcaa
    15241 accaagcggt tggacaacta tttgctaaaa cacaaattat tagatgtaaa taacaaaatc
    15301 agcacaaaag ctgtacttaa ataccaagaa tcattaaatg aaaaccgaga tgaagccgaa
    15361 tatttttatt caatgctcca ctatgttgcc agaggaatgc ctgctgcaca atttaaagag
    15421 aaatatggcg taaattcaag ctacgattta atgagtgaaa taagagaaag aaatactgac
    15481 ccacgttatt ttgaagctac taattctgag ctggttcgct taactaaagc agatatggca
    15541 aatgctcgtg aatatattac atttagtagc caattatatc ggcctaattc attttcccat
    15601 caaaaaatag aaaataagct atgccaaaaa ctcctttctc aaggttacta ttttgaggga
    15661 aatatattaa atattgagta tcaatactca gaaacggctc aagactgctc ttcaataaca
    15721 caagatccta ctgaatttgt tatctacttt aaaggacttg ggactactat tgaatttaac
    15781 attaacgata ttttgaaaaa aatctttgct aaacatcagt tatctattac ccagcaacac
    15841 aaaaatgagg ttttagaaaa gattaaaggc gatttactca aaatggattt aggaaattca
    15901 gtacttgggc ttaagcatat tgagttaaga tttgaagaca atatcggcta tatagtagaa
    15961 agtattagta cacaatatat tatgctgaaa taaaaggaga tgctcgttca attaaatttg
    16021 aacgagcatt tttcgttaaa aactcaattt aagcagccac tcaaaattag tctcatttaa
    16081 ccgatattgc ggtttcaaat tcgggccgca agagtttgag ccaatgccgc tcattttgta
    16141 atcgacacac agcacggtgg aagggctttc taccaaatca taactgtggc ttttagtggt
    16201 tagctcttcc tgtgtgtaag gcgaaagatt aaaactaaac ggctgtggag aagtaacagt
    16261 tatcccattt gcttgcacat aatgcgtacc gaaatggctg ccgttttcct gcggtttgag
    16321 ataatcggta tgattttctc gggcgctggt ttgataagct ccgagtttcg ccaaatggta
    16381 tttgtcgata taactctcct gctcgccata gccaaaatag ctcacttggt tattccgttt
    16441 attcaagaaa aaccgcaagc caaagcgagg taaaaacggc aaatgagcgg ggcgggttgc
    16501 ctgaacctga atcgtcattt cgccattcgg ggcaagatga taattcactt tcagggttaa
    16561 aatccgactt tgagcggttg ccacaatgcc acattcggca gtaatgttta cgccgttttt
    16621 atcttgcatc agttcggtat gatacgccct ggtgtaacag ttatcgtagc cggctttttt
    16681 ccaaaactca cgaattaagc ggtcgttatc ggttggggct cgccaaatat tgaaatccaa
    16741 cggttgctca attactgcct cgccgttttt ctcaatccgg ctgaaaatgc ctttgagttt
    16801 atcgaaagtg tagcgatagt cgccctgttg aatccgccat tcatttgcaa aatcttgcac
    16861 aaaaatgacc gcttgcgggc gtggattaag tgctggagtg accatcgctt gatgcagcgt
    16921 gatttggtca aagcctaagt gatgcccttt ttccaacaga gccgtgcttt catttaaaga
    16981 ataatcaagg gttaaaagtt gcaatttgcc gtttggttcg ggcagcgtta gcggcaaaca
    17041 agcggtctga tttggctgac aatttaccaa acattgtccc tgcagggtgg tttcgccgtt
    17101 ttcgctgaaa cagtaatgca cggtcagata atcagctaag tcgctgaaat ccaactgatt
    17161 tttcagccaa attttgcccg cttttaactc agctcgcacc gggcgattca catttttcac
    17221 ttctaacaaa ttagagtgtg gcacacgctg ttgggaaacc aagccgtcca tacagaaatt
    17281 gccatcgtgc aaggtttcgc cgaaatcacc gccatagccg tatttttcgg tcttctgttc
    17341 ggcacttagc tcagagttgg ggagcagagg agcatggtcg caccattccc acacaaagcc
    17401 accgcacgca ccgctgtagc gttggaaggt ttgccaataa tcttccatat caccactcga
    17461 attgcccatc gcgtgagaat attcacacaa aataaaaggt ttgtggttgg cagagtcgga
    17521 aaaatattcc tctaaccgct cggtgcttgg gtacatctcg ctgtataaat cgaggtttga
    17581 aagatcgttt tgatgtgccg aatgttggta aatcgaacct tcgtagtgag ttaaacggct
    17641 tggatcccgt tgttttaccc aacgggctgc gacttcaaaa ttttcaccaa agccggattc
    17701 gttaccaagt gaccaaataa tgaccgaagt gcggtttttg tctcgctcca cattggcaat
    17761 gttgcgatct aaaatcgcct gtttgaacag cggatctctt gcaaaataac agaaattatc
    17821 gaccgcttgt tggcgaattt cttcctgttt gttcgggttt ggcacattca ggaaaatgct
    17881 gttttccgga ctttcaatat acactgcact ggagccgtga gattcaagat cactttcggc
    17941 aatcagataa aaaccgagct gatcgcacaa ttcactaaac cacggagcgt tcgggtaatg
    18001 ggcggtgcga atagcgttga tgttatgggc tttcattaag cgtaaatcca ccaacgcttg
    18061 ctcacggcta atgctgtagc cggttttcgg gtcggaatcg tggcggttta cccctttaaa
    18121 tttaatcggg gcgttgttga atagcatcac gccattttcc acacgaatct gacgaaagcc
    18181 gattttttgc tcaataattt cgttttggta gctcaagcat agcgtgtaga gtgtcggatc
    18241 ttccgcattc cacaaacaca aattgcaaat ttcttggcaa aaatcaccgc ttgtttgctc
    18301 gcagactaag cggttttcag ggtcgaaaag ttgaaaatgc acagcttcgg tgtaggtgga
    18361 aaattgtgtt tccaccttga gttctgcctt tgaaagatca gcgtttaact ggtagcggat
    18421 aaagaaatct tgcaggtagt tttgctcacg ttccaaaata taaacatcac ggaaaatgcc
    18481 tgacattcgg aatttgtctt gatcttccaa ataactgccg tcacaccatt ttagcaccac
    18541 cacgacgagg ctgtttttgc cctgtttaag ctgtttggtg atgtcaaatt cattggtgct
    18601 gtggctgatt tgcccgtagc cgacaaattc gccgtttaca taaacaaaca ggcacgaatc
    18661 tacgccctca aaatttagca aatagcgttt gttaggcttg gggttaaacg tgatttcacg
    18721 ctgatacacc ccgcaagggt tttggtgtgg cacataaggc ggatcaaacg gaatcgggta
    18781 gttgatgtta gtgtattgat gggcatcaaa gccttgagtt tgccagttag acggcacggg
    18841 gatttggtgg gtaaatttgg tgttgaggaa atcctccggc agatcgtgcg gacttggata
    18901 gaaattaaac ttccaatcgc catttagcaa agtaaataac tcagattgtt cccgttccaa
    18961 ctgattcggc gtttgccctt tagcaaaagg aataaaataa gcgtggtgta gcgtggtatt
    19021 aaggtgcaac acactcgggt cttggtagta attcggtaac gacataaaag ccctatgatc
    19081 aaaaagatat aaatacgaat acactttaat tctcttataa aatagggcaa tcaactatgt
    19141 gaaaaattgt gaggcggatc acaaaataat ttcctcacct ttttccttcg attccgttat
    19201 aatcacaaga attttttatg tcatttttca aggaatttac caatgttata tccaagcgaa
    19261 gaatttttat atgcaccggt tgagtgggtt gatcacagcg aaggttacac cgatattcgt
    19321 taccataaat caaaagacgg tatcgctaaa atcaccatta atcgtccgga agtgcgtaat
    19381 gctttccgtc cgcaaacggt aaaagagatg attgaagcct tttctgatgc ccgttttgat
    19441 gaaaaaatcg gcgtcatcgt attaaccggt gaaggcgaat atgcgttctg tgccggcggc
    19501 gaccaaaaag tgcgtggcga ttacggcggc tacaaagatg aaagcggtgt gcatcactta
    19561 aatgtgttgg atttccaacg tgatattcgt acctgcccga aaccggtggt ggcaatggtt
    19621 gccggctatg cgattggtgg tggacacgtt ttacatatgt tatgtgattt aaccattgcc
    19681 gctgacaatg caaaattcgg tcaaaccggc ccgaaagtgg ggtcatttga cggcggttgg
    19741 ggtgcaagct atatggcacg tttagtcggt cagaaaaaag cgcgtgaaat ttggttctta
    19801 tgccgtcaat ataatgcaca agaagcgtta gatatgggct taatcaatac cgttgtgcct
    19861 tatgctgatt tagaaaaaga gactgtgcgt tggtgtcgcg aaatgctaca aaacagcccg
    19921 attgccttac gttgcttaaa agcagcattg aatgcagatt gtgacggtca ggctggcctg
    19981 caagagcttg ctggtaatgc aacaatgttg ttctatatga cagaagaagg gcaagaagga
    20041 cgcaatgcgt tcaacgagaa acgtgagccg gacttcagca aattccgccg caatccataa
    20101 ttgacggcaa atacaagcgg ttcgattttg caaaaaattt gcaaaaatcg accgcttacc
    20161 ttttctaatt taagttaatt ttatgtcaga tgttgagtta aacgagcaga gcgagcaaga
    20221 gcctgagcaa aaaccgaaaa agcgaaacta tttcctttca accttattca aaatcggggt
    20281 gataggagct tgcagtatgg ctttttacgg catttattta gacggtaaaa tccgtagcaa
    20341 aatggatggg cagatatggg aattaccagc tgaggtgtat gctcgtattg aaagcattaa
    20401 aattgaagac aacttaacgc ttgagcaaac caaacaagcg ttgctggata acggctatcg
    20461 tcaagtttct caagttgcga caccaggcga tttcaaaatt gaagaaaatc agctggtgtt
    20521 gctacgccga gctttcccgt ttccagaaac accggaatcg caacgagtgc ttcgtttaac
    20581 tttcaaacaa gataaattaa cttatattga agatttggtg cagggtaagt tgatcgagga
    20641 gttccgcttg gatccgaaat tactggcgtt actgcattcc gatagcgatg aagaacgtca
    20701 agcattacgc ttacaacaat accctcgctt gttaattgag tcactgattt taaccgaaga
    20761 tcgccgcttt tatcagcacg atgggattag cccaatcggt attgcccgtg ctttaatcac
    20821 taactaccaa gctggcagaa cagtgcaggg tggcagtacc ttaacgcaac agttagtgaa
    20881 aaacttgttc ttaagtaatg aaagatcgtt ggtgcgtaag gtaaatgaag cgttaatgtc
    20941 ggtgatttta gacttccgtt acgataaaaa ccgcatttta gaaacctatc tcaacgaaat
    21001 ttatttaggg cagaacggta gctaccaaat tcacggtttt gcattggcaa gccaattcta
    21061 ttttggtcgt ccgatccaag agattagctt agaccaaatt gcgttattgg tgggaatggt
    21121 aaaaggtcca tcactgtata acccgtggcg aaatccgcaa ggtgcggtag agcgacgtaa
    21181 tgtggtgttg cgattattgc tggatcatca agtgatcaat caagaacttt acgctctgtt
    21241 aagctcccgc ccgcttaata ttcgtgaaaa aggcacgatt taccgtgagc aacctgcctt
    21301 tatgcaggca ttaaccattg atttgaaaaa tgagttaggc gaaattaagt cagctcaact
    21361 ttccggtact aaaattttta cgacccttga ccgtaaacag caacgttcag ccgaacaagc
    21421 agtgattacc ggtttggaag atctggaaag taaaaataaa aaagtcagcg atttgcaatc
    21481 ggctattgtc gtggcggaat accgcacagg taaagtgagg gcgatagtag gagaccgctt
    21541 aacccaattt gccggcttta accgtgcgat tcagtcaaaa cgccaaatcg gttctttagt
    21601 caaaccatcg gtttatgcga ttgccttggc acagcctgaa ttattccgtt taaatacacc
    21661 gatccaaaat aaacaaattt caattaaggt tggttcaacc tactggacac cccgtaacta
    21721 cgaccgcagt tttagtggct cggtgatgtt aatggacgcc ttagtccgct ctctgaatat
    21781 tccaacggtg aatattggta tgaaagttgg cttaaaaaaa gtcattgcca aacaaaaaga
    21841 gatgggctgg gataatgcgg aaattccgcc ttacccatca accttgctag gttcatattc
    21901 gatctcgcct tacgatgtaa cccgctctta tcaagtaatt gccaacgaag ggctgaaaac
    21961 accattaacc accattgagg cgattatttc gcacaatggc gaaatgttct atcagcgaga
    22021 tagcggcaaa gtgagcgagc aggtgcttcc accggaagct gcggttcaaa caatgtatgc
    22081 gatgcaacag gttgtggaac gaggtacggc tcgtagctta caaaacgatt ttgccaaact
    22141 gaaattagcc ggcaaaaccg gtacaaccaa taacgctcga gatacttggt ttgtgggaat
    22201 tgatggcgaa cacgtcacaa ccgtctggct gggtaaagat aacaatgggg ataccaacct
    22261 caccggttca agtggtgcat tgtatgtgta taagcaatat cttgagagag ccttgcctca
    22321 ggcgtataga ttaccgaaac ttaatacgat gcaatgggtg gggattaata gctatggtag
    22381 ctggaattgc gatagtggca gacaaattcc agtttggcga gataaagggc aacgttattg
    22441 taccagtgca ggtaatgtag tggctacaga aaaaccaagt gtttgggatg cactttcgct
    22501 gaaaaaagaa aatatcgagg ctaaagcaga agaagctgaa gggaagcaac caatccctac
    22561 tgaagaagtt gcaccaattg aataaaaata aatttgatag ccattatcat tcaagataca
    22621 caagctgata gattctacct ataaaaagta tatattataa ctat
//
LOCUS       DANLTI010000029        22517 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.029, whole genome shotgun sequence.
ACCESSION   DANLTI010000029 DANLTI010000000
VERSION     DANLTI010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22517
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.029"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(218..1621)
                     /locus_tag="PXB09_000873"
     CDS             complement(218..1621)
                     /locus_tag="PXB09_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDL5233011.1"
                     /translation="MLTYTFNTQEGTALYEQLYRFLKNDIESNILIAGDKLPSKRAFA
                     KHLGISVMTVETAYQQLVAEGYVNTQPKKGFFVNALNLPEKKEAISVQLQKISSEQYE
                     KNKKWQADLTNRQTLAENFPFSVWTKLVREVLKTHQSELMERAESGGVWTLKFAIANH
                     LRAFRGMIVNPTQIIIGAGTEYLYGLLIQLLGLDKHYALTEPSYDKLRRIYHSYRLST
                     ATVSMPFSIDELNSKNVDVIHTSPSHHFPTGHVMPIAKRYELLAWVAQKAERYIVEDD
                     YDSEFRFVGQPIPALKSIDMLGRVIYMNTFSKTLSSTVRIAYMVLPPELLNRFQQELG
                     FYASTVSNFEQYILAEFIQQGYFEKHINRMRAYYQKKRDKLLKAFKQGNLAEKIAIKE
                     EHSGLHFIVQLNTTLTERQILQAAEEQGIKFVALSAYYQDKSQIQQNAFIIGYSNLKD
                     DQINYVAESLKKILDNE"
     gene            1832..2704
                     /gene="pdxS"
                     /locus_tag="PXB09_000874"
     CDS             1832..2704
                     /gene="pdxS"
                     /locus_tag="PXB09_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDL5233012.1"
                     /translation="MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALE
                     RIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKVRIGHVTEAQILQAIEIDYIDES
                     EVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
                     HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPAD
                     AALMMQLGAEGVFVGSGIFKSGDPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGI
                     NEQEIELLMAARGV"
     gene            2704..3276
                     /gene="pdxT"
                     /locus_tag="PXB09_000875"
     CDS             2704..3276
                     /gene="pdxT"
                     /locus_tag="PXB09_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDL5233013.1"
                     /translation="MKIAILALQGAFSEHTDKLQQLGVESMEIRQLADLNQDFDGLIL
                     PGGESTVQGKLLRELGLLEPLRQKILNGLPTLGTCAGLILLAENLVNDDKKHLATLPV
                     TVKRNAYGRQLGSFLVEEEVKYLGKIPLTFIRAPYIESTGKDVEILAKISGKIVGVKY
                     QNQIGISFHPEVNNDLSFHRYFVEMCRKNK"
     gene            3425..4375
                     /gene="tal"
                     /locus_tag="PXB09_000876"
     CDS             3425..4375
                     /gene="tal"
                     /locus_tag="PXB09_000876"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDL5233014.1"
                     /translation="MSQLDTLSKMTVIVADTGDIEAIKLYKPKDATTNPSLILSASAL
                     PQYAPLIEEAINYAKAQSSDKDQQLVDAEDKLAVNIGLEILKLVPGRISTEVDARFSY
                     DTEKTIAKARKLIGLYNDAGISNDRILIKIASTWQGIKAAEQLEKEGINCNLTLLFSQ
                     AQARACAEAGVYLISPFVGRILDWYKAHEGKEYAPAEDPGVISVTNIYNYYKQHGYDT
                     IVMGASFRNVGEIIELAGCDRLTISPPLLKELQESDEKLVCKLDYKGEIKPRPEKMTE
                     AEFYWEHNQEPMAVEKLAEGIRKFAIDQEKLEAMLAEKLQ"
     gene            complement(4437..4710)
                     /locus_tag="PXB09_000877"
                     /pseudo
     CDS             complement(4437..4710)
                     /locus_tag="PXB09_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
     gene            complement(4741..5205)
                     /locus_tag="PXB09_000878"
     CDS             complement(4741..5205)
                     /locus_tag="PXB09_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5233015.1"
                     /translation="MKKLALAVALMSSFALVGCANTDVFSGSVYSGEQAKEARSIAYG
                     TIVSVRDVKIQARSEGVIGTVGGGVLGGVAGNAIGGGTGQAIATAVGAVAGAVIGNQV
                     EQKASQVSSLEMVIRKDDGKEIVVVQKKEDGFVPGKRVRIVGSNSDLNVSLL"
     gene            complement(5226..5825)
                     /locus_tag="PXB09_000879"
     CDS             complement(5226..5825)
                     /locus_tag="PXB09_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5233016.1"
                     /translation="MDKIIAENAKFFEKMTACFGDLSQFEQKIRQIAEIAGIDLAAYE
                     IDHLAVRMNQTETAEQWKILLLDGATLLKESEVNGRPIGLFALIQAVEFCGQFVKIVE
                     LPFPKNKVYLEEGWEHIELVFPMLDNESSEQWVSRALSHFRLADNSEIKLKISQPQVE
                     GERLPNPSIAISLRNVTFCNPYCLKLHPYDIKSVIMSEN"
     gene            5859..7586
                     /gene="argS"
                     /locus_tag="PXB09_000880"
     CDS             5859..7586
                     /gene="argS"
                     /locus_tag="PXB09_000880"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDL5233017.1"
                     /translation="MNIQQILSDKIKQAMVASGADSNVEPLVRQSGKPEFGDYQANGA
                     MGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQA
                     VNFGIKTANPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVG
                     DWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYVVKLQ
                     SGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG
                     LAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRAL
                     VFSDSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKD
                     LLDEAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML
                     TFEGNTAPYMQYAYTRIRSIFARANIDENALSGSIQLNEPKERALAVKLLQFEEALNG
                     VAKEGMPHILCQYLYELAGSFSSFYEACPILNAEETTKNSRLKLAALTAKTLKQGLDL
                     LGIKTVEKM"
     gene            7776..8942
                     /gene="cgtA"
                     /locus_tag="PXB09_000881"
     CDS             7776..8942
                     /gene="cgtA"
                     /locus_tag="PXB09_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDL5233018.1"
                     /translation="MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGD
                     VYLIADENLNTLIDYRFEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQ
                     EIIGDLTRHGMKMLVAKGGYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLA
                     DVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLI
                     EGAADGAGLGIRFLKHLERCRILIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEK
                     PIWLVFNKIDTIGEEEAAERAKDIAEQIGWEGDYYLISAATGQNVQALTRDIMDFIEA
                     NPREVEEENKAPEEVKFKWEDYHNEAMQNAVEEDWDDDWSEEDDEGIEFIYERH"
     gene            9027..9644
                     /locus_tag="PXB09_000882"
     CDS             9027..9644
                     /locus_tag="PXB09_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HDL5233019.1"
                     /translation="MLSSTSCDLFNIPFFQFAQMKKYCPEEIPRIKAEYKTQWEIWKK
                     LHQEVSRQLGQPFAPPHIEKWCNGWQVRAHFFAYYKYEFNRNSAAILSVILNRRRLQV
                     SLDWHCYRADRSQINVHQYNQWWENLDREKFADFEIWHGSESEYDDFRTVSQMSEQAF
                     TLTNEEDFWCIGKNVEKDDLDNIDVVEFIYQTIRALLPLYEKCHQ"
     gene            complement(9691..11649)
                     /locus_tag="PXB09_000883"
     CDS             complement(9691..11649)
                     /locus_tag="PXB09_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDL5233020.1"
                     /translation="MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTW
                     AMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLPLQYRLSAVWGAHEGSLLLWVWL
                     LSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE
                     LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVF
                     LTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWT
                     VLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLVLVVGGSLLLYAFKG
                     SEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFD
                     QMFLILMVPFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITV
                     SVVLGTMMSVFIVLLSLYELHQRATHRHSFLSGIFKLSRSHWGMVLAHLGVAMTVFGI
                     AFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRNGKYEAT
                     LNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGG
                     LFMALGGLLCMLDKRYRLRIENKKEVIA"
     gene            complement(11646..12203)
                     /gene="ccmE"
                     /locus_tag="PXB09_000884"
     CDS             complement(11646..12203)
                     /gene="ccmE"
                     /locus_tag="PXB09_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDL5233021.1"
                     /translation="MNPRRKSRLKVVVSILLGLSVAAGLTLYALSQNIDLFYTPSEIV
                     NGKNDDPKQKPEVGQRIRVGGMVVEDTVKRDDKSLKVVFDLNDIGPSITVEYEGILPD
                     LFREGQGIVAQGVLIEPTRLKATEVLAKHDENYMPPELGDKLKEQHKKSGVSEQDLKG
                     ESETDRKMKAEAEAEKANNVQGESK"
     gene            complement(12389..12586)
                     /gene="ccmD"
                     /locus_tag="PXB09_000885"
     CDS             complement(12389..12586)
                     /gene="ccmD"
                     /locus_tag="PXB09_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDL5233022.1"
                     /translation="MTFQFESISDFFAMGGYGFYVWLSYGVSFIAMIGLIWLSRREQK
                     AILAQAKKEIVREEKLKQTSQ"
     gene            complement(12601..13338)
                     /locus_tag="PXB09_000886"
     CDS             complement(12601..13338)
                     /locus_tag="PXB09_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HDL5233023.1"
                     /translation="MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFA
                     PKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLVALVWQIRQANLAMISMAPIGLV
                     FAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
                     VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAW
                     FSIWRYRIALLKDERNRPWVKQLAKSV"
     gene            complement(13538..14200)
                     /gene="ccmB"
                     /locus_tag="PXB09_000887"
     CDS             complement(13538..14200)
                     /gene="ccmB"
                     /locus_tag="PXB09_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005565617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDL5233024.1"
                     /translation="MILLTIIQRELTIAFRKPSEILNPLWFFLMVITVFPILMGPNPE
                     LLGKIAGGIAWVAALLSALLSFERLFRDDYLDGSLEQLMLLPLALPQVALAKVIAHWL
                     LTGLPLILLSPIAAILLSLETHVWWALVLTLLLGTPILSCLGAIGVALTVGLRKGGTL
                     LSLLILPLFLPVLIFAAAVLEAATLNMGYSGQLAIIGAILAVTLTFSPFAIAGALRIS
                     LN"
     gene            complement(14197..14838)
                     /gene="ccmA"
                     /locus_tag="PXB09_000888"
     CDS             complement(14197..14838)
                     /gene="ccmA"
                     /locus_tag="PXB09_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDL5233025.1"
                     /translation="MNQTAQYQLKLNQIACERGETRLFEGCSFTVQSGEWVQIEGHNG
                     IGKTSLLRILAGLFLPAEGEVLWNDIAIQKQRDHYYSELFYLGHYSGVKPELTPWENL
                     RFYQKIQQLPQDDDALWHALTKVSLIGREDLPCSHLSAGQQRRVALAKLWLTNAKLWI
                     LDEPFTAIDKKGVADLIAHIEQHCEQGRLVIFTSHQAAESDKVRIISLDQFKV"
     gene            complement(14982..15692)
                     /gene="hda"
                     /locus_tag="PXB09_000889"
     CDS             complement(14982..15692)
                     /gene="hda"
                     /locus_tag="PXB09_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDL5233026.1"
                     /translation="MQLPLPIHQIDEDTFDNFYSQNSEVLLGSLKRNFTDVQQPFFYI
                     WGGKSCGKSHLLKAVSNHFLLNNQTSSYIPLTKANYFSPLVLDNAELLNVICLDDIQA
                     IAGDAEWELAIFNLFNQIREQQGLFNEGQKTLLLISADCPPHQLNIQLPDLRSRLTWG
                     EVYQLNDLTDEQKCQILQLNAHQKGVELSDEVAHFLLKKAGTDLEQLSKILDKLDKAS
                     LQAQRKLTIPFVKEILSL"
     gene            15962..17563
                     /locus_tag="PXB09_000890"
     CDS             15962..17563
                     /locus_tag="PXB09_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233027.1"
                     /translation="MKNMTKLSLITLALAASSSVFAAPKTFVYCLEASPSALSPVLST
                     DGASFDVNALPIYNKLTDFEDGTTNVIPSLAEKWDISEDGKTYTFHLRKGVKFHDNKE
                     FKPSRELNADDVVFSINRQFDPNHPFHKVSGGNYEYFIGMDMQNIIDKVEKVDDHTVK
                     ISLKVPNAPFLANLAMDFNAVYSAEYAEQSLKAGKPERIDTNPIGSGPFQFVDYQKDA
                     TVRYKAFENYWQGTAKIDRLVFAITPDASVRLAKLQKGECHAMPYPNPADIEDLKKDP
                     NIELMSQSGMNIGYLALNSSIKPLDNQKVRQALNHAVNKQAIVDAVYQGAGQVAKNPI
                     PPTMWSYNEAVQDYDYNPEKAKALLKEAGFENGFDTELWAMPVSRPYNPNARRMAELI
                     QEDWKKVGVNAKIVSYEWGEYLKRLRQGEAATSMIGWTGDNGDPDNFLNTLLSCSAVE
                     AGSNYAKFCHKPFEEVVLGAAQESDKAKRTELYKQAQVIFKEQAPWITIAHSTVYFPV
                     RKEVKGYVMSPFSLHNFYKVDLADK"
     gene            17835..18839
                     /locus_tag="PXB09_000891"
     CDS             17835..18839
                     /locus_tag="PXB09_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5233028.1"
                     /translation="MFSFILKRVLMVIPTFIAITLITFALVHFIPGDPIEIRMGERGL
                     SPEVHQQMMEQLGLNRPLFEQYISYIKGVLHGDLGNSFRNNEPVLKEFFTLFPATVEL
                     AFFALLWSLIFGIILGVIAAVKKESWISHTVTTLSLTGYSMPIFWWGLILILYFSTPL
                     GLPASGRLPSEYWIEAETGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVVTR
                     MTRSSMLEVLGEDYIRTAKAKGLNTTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVL
                     TENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATIIILVNLTVDLLYGIVNPRIRHS
                     "
     gene            18941..19834
                     /locus_tag="PXB09_000892"
     CDS             18941..19834
                     /locus_tag="PXB09_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5233029.1"
                     /translation="MSGITAVNPPAPKTPLQEFWYYFCQNRGALIGLTFIAIVFVACV
                     FAPWVAPFDPIEQNRSALLLPPAWLEGGNSAHLLGTDDIGRDILSRIIYGSRLSVFIG
                     LVIVLLSCVFGVILGLLAGYYGGTLDIIIMRFVDIMLAIPSLLLTIGVVTILGPSLIN
                     AAIAIAIVSIPSYVRLTRASVLSEKNRDYVTASRVAGASVLRLMFVVILPNCLAPLIV
                     QMTMGISNAILELAALGFLGIGAQPPTPELGTMLAESRGFMQSANWLVTIPGLAILSL
                     VLAFNLMGDGLRDALDPKLKQ"
     gene            19845..20834
                     /gene="dppD"
                     /locus_tag="PXB09_000893"
     CDS             19845..20834
                     /gene="dppD"
                     /locus_tag="PXB09_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDL5233030.1"
                     /translation="MALLTVDQLSVHFGETKTPFKAVDRISYEVNEGEVLGIVGESGS
                     GKSVSSLAIMGLIDFPGRVMAEKLYFNGNDLLALKPKEKQQIVGADVSMIFQDAMTSL
                     NPSYTVGYQIMEALKVHQGGSKASRRERAIELLTMVGIPDPESRLEVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVA
                     ESAHRIIVMYAGQVVEEGKAEQIFKAPLHPYTQALLKALPEFAEGKSRLQSLPGVVPG
                     KYDRPQGCLLNPRCPYATEKCRTIEPAMQIINGRQVKCHTPLNAQGEPIRIAV"
     gene            20962..21951
                     /locus_tag="PXB09_000894"
     CDS             20962..21951
                     /locus_tag="PXB09_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233031.1"
                     /translation="MKENNSLPPFLKAVDLKKYYPVKKGMFAKPKTVKALDGVSFTLE
                     RGKTLAIVGESGCGKSTLGRMLTMIESPTEGELFYNGQNFLVNDKETAQLRRKKIQIV
                     FQNPYSSLNPRKKVGSILEEPLLINTNLSAKERKEKVLEMMAKVGLKPEFYDRYPHMF
                     SGGQRQRIAIARGLMLQPDIVVADEPVSALDVSVRAQVLNLMMDLQEEMGLSYVFISH
                     DLSVVEHIADEVMVMYLGRCVEQGDTKTIFSNPRHPYTQALLSATPRLNPEQRRERIK
                     LTGELPSPLNPPKGCAFNARCRFATDRCYVERPELKTYQDGTRIACFVVEENN"
     gene            complement(22185..>22517)
                     /locus_tag="PXB09_000895"
     CDS             complement(22185..>22517)
                     /locus_tag="PXB09_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248476.1"
                     /note="Bacteria have multiple sigma factors which are
                     active under specific conditions; the sigma factor binds
                     with the catalytic core of RNA polymerase to produce the
                     holoenzyme and directs bacterial core RNA polymerase to
                     specific promoter elements to initiate transcription;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HDL5233032.1"
                     /translation="RIVLESDLADDDEENHFFDNYGHWKEEYYPSSWQEEAVYSKEFW
                     ILFEVCLSNLPAKQARVFMMREYLEATSDEICRVVNITSDNLYTLIYRARLQLQQCLS
                     RKLTERNR"
BASE COUNT         6817 a         4813 c         4639 g         6248 t
ORIGIN      
        1 attgtctgat aaattgttaa agaacaaaaa gaaacgacgc actggaaatc aattttaaat
       61 cgttcacaac agtgcgtcgt tgtgtgccat gcattatacg caaaacaaaa tgccttgcaa
      121 ggagaatttg gtaatttttt gcaaaaatca ctaaaataat taccacttgc gtgtttttaa
      181 ggcaatttgc taaaaattaa agcagttttg atacttgcta ttcgttgtct aaaatttttt
      241 tcaggctctc tgctacataa ttaatctgat catcttttaa attagagtac ccaattataa
      301 aagcattttg ctgaatttga gatttatctt gataataagc agacaatgcg acaaatttta
      361 taccttgttc ttctgctgcc tgcaaaattt gcctttctgt taatgttgtg tttagctgta
      421 caatgaaatg caagcctgaa tgttcttctt ttattgcaat cttttctgct aaattgcctt
      481 gcttgaaagc ttttagtaat ttatccctct ttttttgata atacgctcgc attcgattga
      541 tatgcttttc aaaatagcct tgttgaataa attctgccaa aatatattgc tcaaaattgg
      601 aaacggtaga agcataaaac cctaattcct gctgaaaacg attcagtaat tctggtggca
      661 aaaccatata ggcaattcgt acagttgaag agagcgtttt agaaaaagta ttcatataga
      721 taactcgccc gagcatatca atagatttca atgcaggaat tggttgtcct acaaaacgaa
      781 attcgctgtc gtagtcgtct tctacaatat atctttcagc tttttgtgca acccaagcta
      841 acaactcata acgtttggca atcggcatta cgtgtcctgt cggaaaatgg tgtgatggcg
      901 aggtatgtat cacgtccaca ttctttgaat ttaactcatc gattgaaaat ggcatcgata
      961 ctgtggctgt tgataagcga taactgtgat aaattctgcg caatttatcg taactgggct
     1021 cagttagtgc ataatgttta tctaagccta gaagctgaat gagcaaaccg taaagatact
     1081 ccgtacccgc tccaataata atctgtgttg gattaacgat cattcctcta aaggctcgaa
     1141 gatgattggc tatcgcaaat tttaatgtcc atacgccccc actctcagca cgctccatta
     1201 gctcactttg gtgtgttttc agcacttcgc gtactaattt tgtccaaacc gaaaacggaa
     1261 aattttctgc taaagtctgt cgattagtta aatctgcctg ccatttttta tttttctcat
     1321 actgttctga actgattttt tgtagctgaa ctgatatggc ttcctttttt tctggtaaat
     1381 ttaaagcatt cacaaaaaag ccttttttag gctgagtatt cacataacct tctgctacta
     1441 actgttggta agctgtttcc actgtcatta ctgaaatgcc taaatgcttt gcaaaagccc
     1501 gtttagacgg cagtttatcc cctgctataa gtatgttgct ttcaatgtcg ttttttagaa
     1561 aacggtaaag ttgctcatag agagcggtgc cttcttgtgt gttaaaagtg taggtaagca
     1621 taatctgaca tgataagaaa aacataaaat ggtcatttta aacagttcag attaaattac
     1681 aatacatgct gtttcctcac tcaaattggc tgagtgtatt taaattggta gatgaacact
     1741 cgcatccagc gaatataaaa ataaacttaa tgccgagcta atcgaaacta cgaaaagttc
     1801 aattattcaa caattagaag gaaaaagtac aatgactaat cgctatgatt taaacagaca
     1861 acttgctcaa atgttaaaag gcggtgtaat tatggatgta actacccctg agcaagcctg
     1921 cattgcggaa gaagctggag cttgtgcagt aatggcacta gagagaattc ctgcagatat
     1981 tcgtgcagct ggtggcgttt ctcgtatgag tgatcccaag atgataaaga gtatccaagc
     2041 agcggtatcc attcctgtaa tggcgaaagt acgtattgga cacgttacag aagcacaaat
     2101 cctgcaagcg atcgaaattg actatattga cgaaagtgag gtgctttctc ctgcagatga
     2161 taccttccac attaacaagc gtaaatttga agtgccattt gtatgtggag caaaaaattt
     2221 aggcgaagcc ctacgtcgta ttaatgaagg cgctgctatg atccgtagta agggcgagcc
     2281 aggaacaggc aatgtggtgc aagcagtaca tcatcttcgc aaaatgaaac aagaaattgc
     2341 ccgcttggtt tcacatacca cagatgaact ttatcacgta gctaaagagc tccaagtacc
     2401 atttgattta gtacaatatg tacatcagta ccaaaaattg cctgttgtca cctttgctgc
     2461 tggaggtgtt gcaacccctg ccgatgctgc attgatgatg cagttaggtg cagaaggagt
     2521 cttcgttggc tcaggtattt tcaagtcagg cgatcctgct aaacgagcgc gggccattgt
     2581 acaagctgtt accaactaca acgatcctaa attacttgcg gagctttctg aagatttagg
     2641 tgaagcaatg gtaggaatta atgagcaaga gattgaattg ctaatggcag caagaggtgt
     2701 ctaatgaaaa ttgctattct tgctctgcaa ggtgcattta gcgagcatac tgataaactc
     2761 cagcaactag gggttgaaag tatggaaatt cgtcaacttg ctgatttaaa ccaagatttt
     2821 gatggtctga ttttacctgg tggcgaatcg actgttcaag gtaaattatt acgtgaatta
     2881 ggcttgcttg agccgcttcg tcaaaaaatt ttaaatggct tgccaacgct tggaacttgt
     2941 gcgggtttaa ttttgcttgc ggaaaatttg gtaaacgacg ataaaaaaca tttggctact
     3001 ttgcctgtaa cagtgaaacg taatgcttac ggaaggcaat taggctcgtt tttagtagaa
     3061 gaagaagtta aatatctcgg taaaattcct ctcacattca ttcgtgcgcc ttatatagaa
     3121 agcactggaa aagatgtaga aattttagcc aagataagcg gtaagattgt tggagtaaaa
     3181 taccaaaatc agataggtat atccttccat cccgaagtga ataatgattt aagttttcac
     3241 cgctattttg tggaaatgtg ccgaaaaaat aagtaaaaga aaaggggcta ttgcctctta
     3301 ttttttatac ttttttagaa aaagtagttt tgaataaaaa aatactaaaa ctctatttcc
     3361 cttatgttat tattatagta acttttacta ctatttattt cacaatcaaa aaaggaatca
     3421 gactatgagc caacttgaca ccttaagcaa aatgaccgtt atcgttgctg acactggtga
     3481 tattgaagca atcaaacttt ataagccaaa agatgcaaca acaaacccgt ctttaatttt
     3541 aagtgcatcg gcattaccgc aatatgctcc attaattgaa gaagcgatta attacgcaaa
     3601 agcacaaagt agcgataaag atcaacagtt agttgatgct gaagataaat tagcggtaaa
     3661 tattggttta gaaatcttaa aacttgtacc tggacgtatt tctacagaag ttgatgctcg
     3721 tttttcttat gatactgaaa aaactatcgc taaagcacgt aaattaattg gattatataa
     3781 cgatgcaggc atcagtaatg atcgcatttt aattaaaatt gcctctactt ggcaaggtat
     3841 aaaggcagca gaacagttag aaaaagaagg cattaactgt aacttaacgt tattattctc
     3901 tcaagctcaa gctcgtgcgt gtgcagaagc aggggtttac ttaatctctc cattcgttgg
     3961 tcgtatttta gactggtaca aagctcacga aggtaaagaa tatgctccag ctgaagatcc
     4021 aggtgtaatt tcagtaacca atatatacaa ttactacaaa caacacggtt atgacactat
     4081 tgtaatgggt gcaagtttcc gtaatgtagg agagatcatt gagttagctg gttgcgaccg
     4141 tttaaccatc tcaccaccgt tattaaaaga gctacaagag agcgatgaaa aattagtttg
     4201 caagctagat tacaaaggtg aaatcaagcc tcgtccagaa aaaatgacag aagcagaatt
     4261 ctactgggag cataaccaag agccaatggc agtagaaaaa ttagctgaag gcattcgtaa
     4321 atttgcgatt gaccaagaga agttagaagc aatgcttgct gaaaaacttc aatagacaac
     4381 gcataaaaaa accggcatta acgataatta atgccggttt taatttctat aaatgattat
     4441 ttaaactcat aacgtctaat cgtttttaga tcgctatctt catttttaat ttcatcggca
     4501 agatgaacac gagcaccaac cgctgcatgt gcatcatact cacgagttag agtcacagtt
     4561 tcaccattat ctcgttgaac tgtaagttca acaacatcgt ttgatactgc tttgctagat
     4621 aaatgttgca ttacctttat cagaataaac atctgcagta caagctgcta acataagtga
     4681 agctaataca gctaaagaaa gttttttcat taataatata tcctctagga aaaactaaaa
     4741 ttaaagcaga gaaacattca ggtctgaatt agaccctacg attctcacac gtttgccagg
     4801 cacaaaaccg tcttctttct tttgaacgac cacgatttct ttaccatcat ctttgcgaat
     4861 aaccatttcc aatgaagaaa cttgactcgc tttttgttct acttgattac caattaccgc
     4921 accggcaact gcccccactg cggttgcaat cgcttgccct gtaccaccgc caatcgcatt
     4981 accggcaacg ccacctaata caccaccgcc gacagtaccg atcacacctt cactgcgtgc
     5041 ttgaattttc acatcacgca ctgaaacaat agtgccataa gcgatagaac gagcttcttt
     5101 tgcctgctca ccggaataaa cgcttccgct aaacacgtct gtatttgcac agccaactaa
     5161 agcaaaactt gacattaatg cgacagctaa agctaatttt ttcattttgt ttgttctccg
     5221 aaacgttaat tttctgacat aattacactt tttatatcat aagggtggag ctttagacaa
     5281 taaggattac aaaaagttac atttctcaag ctgatcgcaa tgcttggatt tggcaatctc
     5341 tccccttcta cctgaggttg gctgattttt aatttaatct cagaattatc agcaagtcta
     5401 aagtgcgaca atgcccttga cacccattgt tccgaacttt cgttgtctaa catcggaaaa
     5461 accagctcaa tatgttccca gccttcttct aaataaacct tatttttcgg aaaaggcaac
     5521 tcgacaatct ttacaaattg tccgcaaaat tcaaccgctt gtattaatgc aaacagccct
     5581 atcggtctgc cgtttacctc gctctcttta agtaaggttg ccccatcaag caaaaggatc
     5641 ttccactgtt ctgcggtttc ggtttggttc attcttaccg caagatgatc gatttcatac
     5701 gctgctaaat caatgccggc gatttcagca atttgtcgga ttttctgttc aaattgcgat
     5761 aaatcgccaa aacaagcggt cattttctcg aaaaattttg cattttctgc tataattttg
     5821 tccatttttt tgtaaataga atttaaatag gttaaacagt gaatattcaa caaattttat
     5881 cagataaaat taaacaggca atggtagcaa gcggtgcaga cagcaatgtc gagcctttag
     5941 tccgccaatc gggcaagccg gaatttggcg attaccaagc caatggtgcg atgggtgcag
     6001 cgaaaaaatt ggggatgaat ccgcgtgaat ttgcccaaaa aatcttagag aatgccgatt
     6061 tgaacggtat tgccgataaa ttagaaattg ccggtccggg ctttatcaac attttcttaa
     6121 acccagaatg gctggcggag aacactaaca gttcattgca agcggtcaat tttggcataa
     6181 aaactgcaaa tccgcagacg attgtgatcg actactcctc gccaaacgta gcaaaagaaa
     6241 tgcacgtcgg gcatttgcgt tccaccatta ttggcgatgc ggtagttcgt acccttgcgt
     6301 ttttaggcaa taatgtgatt cgtgccaacc acgttggcga ctggggtact caattcggta
     6361 tgctgatcgc ttaccttgaa aaaatggaaa atgagcacgc cagcgaaatg gagctaagcg
     6421 atttagaagc cttctatcgt gcggcaaaag agcattatga ttcagacgaa gcattcgccg
     6481 aaaaagcccg taactatgtg gtgaaattac aaagcggcga taaatattgc ttaacaatgt
     6541 ggaaaaaatt ggtcgatatt acaatgcacc acaatcaaga gaactacaat cgcttaaatg
     6601 ttacgctcac cgaaaaagat gtaatgggcg aaagcctcta caatccaatg ttgcctgaaa
     6661 ttgtggcgga tttaaaagcc aaaggcttag cggtggaaga tgacggtgct ttagtggttt
     6721 tcctcgatga atttaaaaat aaagatggcg acccaatggg cgtaatcgtg cagaaaaaag
     6781 atggcggttt cttatatacc actaccgata ttgcggcagc aaaatatcgc tacgagacct
     6841 taaaagctga ccgagcctta gtcttttctg acagccgcca agctcaacat atgcaacagg
     6901 catggctcat tacccgcaaa gcgggctatg tgccggacag tttcagcctt gaacacccgt
     6961 tcttcggaat gatgctaggc aaagacggca aaccgttcaa aacccgtagc ggtggcacag
     7021 tcaaactcaa agatttatta gatgaagcgg tagagcgtgc cgataaactg attgccgaac
     7081 gttcaaccga gctaactgcg gaagaaaaag ccgccgtggt tgaagcggtt gcgattggtt
     7141 cggtgaaata ttctgactta tcgaaaaacc gcaccaccga ttatgtgttc gattgggaca
     7201 atatgctgac ctttgaaggc aataccgccc cgtatatgca gtatgcctac acccgcattc
     7261 gctccatctt tgcccgtgcg aacattgacg aaaatgcatt gagcggttca atccaactca
     7321 atgagccaaa agagcgtgca ttagcagtga aactattgca atttgaagag gcattaaacg
     7381 gcgtggcaaa agaaggtatg ccacatattt tatgccaata tttatacgag cttgcaggta
     7441 gtttctccag tttctacgag gcttgcccga ttctcaatgc cgaagaaaca accaaaaaca
     7501 gccgtttgaa actcgctgcc ttaacggcga aaaccttgaa acaagggttg gatttactcg
     7561 gtattaaaac tgtagagaag atgtaataca aactctctcc ccttgtggga gagagaccgc
     7621 ttatgagcgt tcagcgaaat aagcagagag aggggacaag cggtaatttt tattaaaatt
     7681 tttacacatt ttcccctctc cctgattttt cttctgaacg aagaaaaatc tgtccctctc
     7741 ccacaagggg agagggcata taaaaggaaa caaatatgaa atttattgac gaagccctga
     7801 ttcgtgtaga agcaggcgat ggcggtaatg gctgtgtgag cttccgccgt gaaaaattta
     7861 tcccgaaagg cggacctgac ggtggtgatg gtggcgatgg tggtgatgtg tatttaattg
     7921 ccgatgaaaa cctaaacacc cttatcgact accgctttga aaaacgttat gccgctgggc
     7981 gtggcgagaa tggtcgcagt gccggctgta ccggacatcg tgggcaagat attaccctac
     8041 gagtgccggt tggaacccgt gcgattgata acgacaccca agaaattatt ggcgatttaa
     8101 cccgccacgg aatgaaaatg ctggtggcaa aaggtggtta tcacggttta ggtaataccc
     8161 gctttaaatc ctcagtaaac cgagctccac gccaaaaaac caacggtacg cctggcgaaa
     8221 aacgtgattt gaaattagag ctgttactgc ttgccgatgt gggaatgctt ggcttaccaa
     8281 acgccggtaa atccaccttt atccgcagtg tctctgctgc caaaccaaaa gtggcggatt
     8341 acccgttcac gacgctggtg ccaagtttag gggtagcccg tgtgggggcc gaccgcagtt
     8401 ttgtggttgc cgatattccg gggttaattg aaggtgcagc agatggtgca gggctgggga
     8461 ttcgtttcct aaaacacttg gaacgttgcc gtattttgat tcacttagtc gatattatgc
     8521 cgattgatga aagcgatccg gctcataata tttcggtgat tgaatccgag ctttaccaat
     8581 acagcgaaaa actcgccgaa aaaccgatct ggttggtgtt taataaaatt gacaccatcg
     8641 gcgaagaaga agctgctgag cgagcaaaag acattgccga gcaaatcggc tgggaaggcg
     8701 attactactt gatttctgcc gctaccggtc aaaacgtgca agctctcact cgtgatatta
     8761 tggactttat tgaagccaac ccacgcgaag tggaggaaga aaataaagca cctgaagaag
     8821 tcaaattcaa atgggaagac taccacaacg aagcaatgca aaatgcggta gaagaagatt
     8881 gggacgacga ttggagcgaa gaagatgacg aaggcataga gtttatttac gaacgccatt
     8941 agtgcaataa tacaagcggt tgtttttaaa cggagatttg caaatttccg gagaaaaaca
     9001 accgcttgta ggtttaagga gagtttatgc ttagctcaac atcgtgcgat ttattcaata
     9061 ttccgttctt ccaatttgct cagatgaaga aatattgccc tgaggagatc cctcgaatta
     9121 aggcggaata taaaactcaa tgggaaattt ggaaaaagct acatcaggaa gtttctcgtc
     9181 agcttgggca gccgtttgct ccaccacata ttgagaagtg gtgcaacggt tggcaagttc
     9241 gagcccattt ttttgcctat tacaagtatg aatttaatcg aaattctgcg gctattcttt
     9301 ccgtgatttt aaatcgtcgc cgtttgcaag tgagccttga ttggcattgt tatcgagccg
     9361 atcgctcgca aattaacgtg catcaataca atcaatggtg ggaaaattta gatcgggaaa
     9421 agtttgctga ttttgagatt tggcacggaa gtgagagtga atatgatgat tttagaaccg
     9481 ttagtcagat gtcagagcaa gcgttcaccc taactaacga ggaagatttt tggtgtatcg
     9541 gcaaaaatgt ggaaaaggac gatttggata acattgatgt agtagaattt atctaccaaa
     9601 ccattcgggc attattgcca ctttatgaga aatgtcatca ataaacacta aaaagagagg
     9661 cgaacatcat ttgttcgccc ctttcaaaat ttaagctatc acttcttttt tattttcaat
     9721 gcgtaaacgg tagcgtttat ccaacataca gagtaaacca ccgagagcca taaacagccc
     9781 gccaatccaa atccagcgaa tgaacggttt ataatacaaa cgcactgccc aagagttatc
     9841 ttctaatttt tcgccaagtg cagcgtataa atctcgggta aagccccagt caatcgccgc
     9901 ttcggtcatt cccattcggc tcaccgtata gaaacgtttt tcagcattaa gtgtggcttc
     9961 atatttaccg tttcgagtaa tttcaagctc ggcagtgccg ccttgatagt ttgccccatc
    10021 ggtgatttta atacctttaa attcaaattg gtaatctaaa atctcagctt tatcacccac
    10081 attcattctg acatctcgtt caatgctgaa attttggcta aatgcaatgc cgaacactgt
    10141 catcgcaacc cctaagtgag ccagcaccat tccccaatgt gaacgggaca gtttgaaaat
    10201 gccacttaag aacgagtggc gatgggttgc acgttggtgt agctcataca ggctaagtaa
    10261 cacaataaag acagacatca tcgtgcctaa caccacactc acggtaatgg tgttacggaa
    10321 taagtatggc aatccgaatc caagcaatgc cattaaaata gttgcaataa ttaccggttt
    10381 acgaatagca gaaacttggt ctctacgcca tttcactaat ggtccaatcc ctaatacaaa
    10441 tgagaaagga accattaaaa ttaagaacat ttggtcaaaa aatggtgccc cgattgaaat
    10501 cgtccctaag ccgatttgtt tgtgaattaa tggcagtaag gtccctaaaa acaccaccga
    10561 taaaaatgcc attaataaaa tattattaat gagtagcatc gtttctcttg aatagcgttc
    10621 atagttatct aagcttttaa tttccgagcc tttgaatgca tacagcagta aagaaccacc
    10681 tactactaac accaagtaag ccaagatgta taaaccacga gttggatctg aagcaaaggc
    10741 gtgaactgac accaaaatgc ctgaacgcac taagaaagtc cccactaaac agagcgagaa
    10801 agcaagaatc gctaataaga ccgtccacgc tttaaatgtg cctcgttttt cagtcactgc
    10861 taatgaatga atcagtgctg ttcctgcgag ccacggcatt aatgaggcat tctcgacagg
    10921 atcccagaac caccagccac cccaaccaag ttcgtagtat gcccaccaag aaccaagcac
    10981 gataccgagc gttaaaaata cccacgctgc cattgtccac ggacgagacc atcttgccca
    11041 cgcagtatct aaacgccctg tcatcagtga ggcaatcgca aaagcaaagg caacggagaa
    11101 acccacatag cccatataaa gcaacggtgg gtggaagatc aagcccacat cttgcagcat
    11161 tgggtttaat tctttgccat caatcggaaa atttgggaaa gttctatcaa acgggttgga
    11221 ggtaaaaatc acaaacatca aaaagccgat gccaatgacc cccattagtc ctaacactcg
    11281 agcaacggca tcttccggca ttttacgggt aaaggttgct accccgacag accaaagcga
    11341 caacaaccaa acccaaagca ataatgagcc ttcgtgagcg ccccacaccg cagataaacg
    11401 atattgcaac ggtaaacggc tattggagtt gttcaccaca tattgcacgg taaaatcatt
    11461 caccgcaaac agataaaaca gcgaaccaaa agagacagtc aatgccaaaa acattgccca
    11521 agtcatcggg cgggcaagag caattaaggt gctattttgc ttttctgctc cccaaagcgg
    11581 taaaactgcc aacaagatag aaatcgctag ggctaatgcc aacgtataat tgcctaattc
    11641 tgcaatcatt tgctttcccc ttgcacattg ttggcttttt ctgcttccgc ctcggctttc
    11701 attttgcggt cggtttccga ttcacctttc agatcttgtt cagacacacc tgatttttta
    11761 tgctgttctt ttaatttatc gcctaattcc ggtggcatat agttttcatc gtgttttgcc
    11821 agaacttccg tagcttttaa acgggttggt tcaatcaaca cgccttgtgc cacaatgcct
    11881 tgcccttcac ggaataaatc cggcaaaatt ccttcgtatt ccacggtaat cgaaggcccg
    11941 atatcattga gatcaaatac tacttttaaa cttttatcat cacgctttac cgtatcttcc
    12001 actaccattc cgcccacacg gatacgctga ccaacttcag gcttttgttt cggatcatca
    12061 tttttaccgt ttacaatttc agacggcgtg taaaacagat cgatattttg gcttaacgca
    12121 taaagtgtca agcctgctgc gacagaaagc ccaagtaata tcgaaaccac cacttttaat
    12181 cttgatttgc gtcttggatt catcgtaatc acccttcaaa ataaatgcaa aattgcataa
    12241 aaactcaaaa ataaattagt gtaagaatag caaaaaaccg caaaacattc ccgatatttc
    12301 aaggaagttt tgcgatttct caaatcaaat acctataaag aagtatgagg ctatcgttgc
    12361 aaaaaataaa gttatttcga ccgcttgttt attgtgatgt ttgctttaat ttttcttcac
    12421 gcacaatctc tttttttgct tgagccaaaa tcgctttctg ttcacggcga ctaagccaaa
    12481 tcagcccaat cattgcaatg aaactgacac cataagagag ccatacataa aagccgtagc
    12541 cacccattgc aaaaaaatcg ctgattgatt caaattgaaa tgtcattgtt ctctcctact
    12601 ctaaactgat tttgccagtt gttttaccca agggcgatta cgttcgtcct ttaataaggc
    12661 aatgcgataa cgccaaatgc taaaccaagc ggtaaaaatt aagctaccga aaatcgccaa
    12721 tagcaacgga attaacattt ccaccgccat agacggttta tcgaatttag tgatggtcgc
    12781 cccttgatgc aaggtgttcc accattccac cgaaaagtga ataatcggca agttaatcac
    12841 gccaacaact gacagcacag ccgccgcttt ggctccggtt tgtctgtctt ggaatgcgga
    12901 ataaagagcc atcacgccga tataaaggaa aaataacact aaagcggagg ttaaacgagc
    12961 gtcccacacc caccaagtcc cccacattgg tttgccccaa attgcaccgg ttgcaagtga
    13021 aataaaagcg aatactaagc cgataggtgc cattgaaatc atcgccaagt tagcttggcg
    13081 aatttgccaa accaatgcca ccaagcctgc caccgccatt gagccatata cgcccatcga
    13141 ccaaattgct gccggcacgt gaataaagat aatgcgatag ctatcgccct gttggtaatc
    13201 tttcggggca aaagccaagc cccaaacaaa agcagccgct aacataatca aacttagcca
    13261 acctaaaaac ggttggattt tccctagcaa atggtactgc gtttccgatt ttgcataagg
    13321 gtgtagccat ttccacatat atttctccaa agtaaataat tcccctcacc cgtttacagg
    13381 agagggacga tttgagcttc gttcagaagc gaaaatcagg gagaggggaa aaagttgcaa
    13441 attttcataa taattcgacc gcttcccctc tctctgaaaa acacctctga acgaggtgtt
    13501 tttcggtctc tctccctcaa gagggagaga ggaagtttta gttcaaacta attcttaatg
    13561 caccggcaat cgcaaacggc gaaaaagtta aagtaaccgc taaaattgct ccgataatcg
    13621 ccagttgtcc gctataaccc atatttaagg tggcggcttc taataccgca gcggcaaaaa
    13681 tcagtaccgg taagaataac gggaggatta ataaactcag caacgtaccg cccttgcgta
    13741 agcccacagt gagtgccacg ccaatcgctc ctaagcagct taaaatcggg gtgccgagta
    13801 ataatgtcag cactaacgcc caccaaacgt gggtttcaag tgaaagcaaa atggcagcaa
    13861 tcggtgaaag taaaatcaac ggtaagccgg tcagcagcca gtgagcaatc actttcgcta
    13921 acgcaacctg cggcaaggca agcggcagta acattaattg ctcgagcgaa ccgtctaaat
    13981 aatcatcacg gaataaccgc tcaaaggaaa gcaatgcaga aagcaaagca gctacccacg
    14041 caatgccgcc ggcaattttg cctaataatt cggggttagg tcccattaaa atcgggaata
    14101 cggtaatcac cattaaaaaa aaccacaacg gatttaaaat ctccgagggt ttacgaaagg
    14161 caatggtgag ttcccgctga ataatagtca ataaaatcat actttaaatt gatctaacga
    14221 aataatacgc actttgtcgc tttcagcagc ctggtggctg gtaaaaatca ctaatctgcc
    14281 ttgctcgcaa tgctgttcaa tatgagcaat cagatccgcc acaccctttt tatcaatagc
    14341 ggtaaagggt tcatctaaaa tccaaagttt ggcgttagtg agccacaatt ttgccaacgc
    14401 cacacggcgt tgctgaccgg ctgacaaatg cgaacaaggc aaatcttcac gcccgatgag
    14461 cgacactttc gtcaatgcgt gccaaagggc atcatcatct tgcggtaact gttggatttt
    14521 ctggtagaaa cgcaaatttt cccacggtgt taattccggt tttacccccg aataatgccc
    14581 taaataaaat agttcagaat aatagtgatc acgctgtttt tgaattgcaa tatcgttcca
    14641 cagcacctca ccttccgcag gtaaaaaaag cccggctaaa atacgtaaca ggctggtttt
    14701 tccaatgccg ttatgccctt caatctgcac ccattcacca ctttgcacgg taaaactgca
    14761 cccttcaaac aaacgggttt cgccccgttc gcaggcaatc tgattaagtt taagctgata
    14821 ttgggccgtt tggttcatta tttttcatct ggttgaacat tttagccgaa gtgtatcata
    14881 agcctttgat ttaacgtagc aaataaatta cttctttaga ggtagcaagc ggtcaaattt
    14941 tcaaaaagtt ttgcaaattt tgataagaat caaaccgctt gttacagaga gaggatttcc
    15001 ttcacaaaag gaatggttaa tttacgctgg gcttggagag acgctttatc caacttatcc
    15061 aatattttag agagttgctc taaatccgtt cccgcttttt ttaacagaaa atgagcgacc
    15121 tcatcggaca attccacccc tttttggtga gcatttaact gtaaaatttg gcatttttgt
    15181 tcatcggtta aatcgtttag ctggtacact tcgccccaag ttaagcggga acgtaaatcc
    15241 ggcaattgga tattgagttg gtgtggtggg caatcggcac tgattaacag caaggttttt
    15301 tgcccttcgt taaacaagcc ttgttgttct cgaatttggt taaacaggtt aaaaatagca
    15361 agttcccatt cagcatctcc tgcaatcgct tgaatatcat ctaggcaaat cacattcagc
    15421 agttcggcat tatctaacac caacggcgag aaataattgg ctttagtgag cggaatataa
    15481 ctagaagttt ggttatttaa aagaaagtgg ttacttactg ctttcaacaa atgactttta
    15541 ccgcagctct taccgcccca aatgtaaaaa aacggctgtt gaacatccgt aaaatttcgt
    15601 ttgagggatc caagcaacac ttcgctgttt tggctataaa aattgtcgaa agtgtcttca
    15661 tcaatttgat gaatgggtag aggtaactgc aaggctttcc ttaaatctct aagtttgata
    15721 tttttctaag aatagcggaa aagcaggggt ttgagaagta aaaatagtga gaaaatatcc
    15781 actcattttt ctaatgaaga gatgacaagc ggttgaattt ccacataatt ttgtcaatct
    15841 gaccgaaaac ccaccgtttt gtgttaaaaa aagattgcag ttagctcaaa aaattgtata
    15901 ttcaaagctt tctacttaaa aagtagagta aaacaactat tacaaacaca acggagtgaa
    15961 tatgaaaaac atgactaaat tatcgctaat aacattagcg ctagccgctt caagtagcgt
    16021 ctttgctgca ccgaaaacct ttgtttactg cttagaggct tcgccttcag cattaagccc
    16081 agtgctatca acagacggtg caagctttga tgtgaacgcc ctcccgattt ataacaaatt
    16141 aaccgacttt gaagacggta caactaatgt tattccctct cttgccgaaa aatgggacat
    16201 ttcggaagac ggcaaaactt acaccttcca cctgcgtaaa ggcgtaaaat tccacgacaa
    16261 taaagaattt aaaccaagcc gtgagttaaa tgcagacgat gtagtgttct ccattaaccg
    16321 tcagtttgat ccaaaccatc cattccacaa agtttccggc ggtaactacg aatactttat
    16381 cggtatggat atgcaaaata ttatcgataa agtggaaaaa gtggacgatc acaccgttaa
    16441 aatcagctta aaagtgccaa atgcgccgtt cttagctaac ttagcgatgg atttcaacgc
    16501 cgtttactca gcggaatatg cagagcaatc cttaaaggcc ggcaagcctg agcgtattga
    16561 taccaaccca atcggcagcg gcccgttcca gtttgtggat taccaaaaag atgccaccgt
    16621 tcgttacaaa gcctttgaaa actactggca aggcacagcg aaaattgacc gcttagtgtt
    16681 tgcaattact ccggatgcat cggtacgttt agccaagtta caaaaaggcg agtgccacgc
    16741 aatgccttac cctaacccgg ctgatatcga agatctgaaa aaagatccaa atattgaatt
    16801 aatgagccaa tctggaatga atatcggcta tttggcatta aattcatcga ttaaaccatt
    16861 agataaccaa aaggtacgtc aagcattaaa tcacgctgta aacaaacaag cgattgtaga
    16921 tgcggtatat cagggagccg gtcaagtagc gaaaaaccca attccaccaa caatgtggag
    16981 ctataatgaa gcggttcaag actatgacta caaccctgaa aaagccaaag cattgttaaa
    17041 agaagccggt tttgaaaatg gttttgatac tgaactttgg gcaatgccgg tatcacgtcc
    17101 atataacccg aatgctcgcc gtatggctga acttatccaa gaagactgga aaaaagtggg
    17161 cgtgaatgcg aaaatcgtca gctatgaatg gggcgaatat ctcaaacgct tacgccaagg
    17221 tgaagcggca acctcaatga ttggctggac aggcgataac ggtgacccag ataacttcct
    17281 caacacctta ttaagctgct cagcggtgga agccggttca aactacgcca aattctgcca
    17341 caaaccgttt gaagaagtcg tgcttggtgc tgcccaagaa agcgacaaag caaaacgtac
    17401 cgagctttat aaacaagctc aagtgatctt caaagagcaa gctccttgga ttacgattgc
    17461 tcactccacc gtttacttcc cggtgcgtaa agaagtaaaa ggttatgtga tgagtccgtt
    17521 cagcttacat aacttctaca aagtagattt agcggataaa taatccgcca acaagcggta
    17581 gaatttgcag atttttttac aaatttgacc gcttgtcctc ccctctttga actacgaggg
    17641 gcagggggga aatttggcag aagcgattgc cgaagtgaga ggattgtaaa agaggaaata
    17701 aattttctgt cttattgatt attttcttcg ttaattacta ctgtcaaatc tcccctaccc
    17761 cctctttgct aaagagggga atcagatcga gagatcagac aactttgatg aaaatccaac
    17821 ctaagagatt ttaaatgttt tcatttattt taaaacgtgt gctaatggtg atccctacct
    17881 ttatagcgat tacgttaatt acttttgccc ttgtgcattt tatccccggt gatccaattg
    17941 agatccgaat gggggaacgt ggattatcgc ctgaggttca tcaacaaatg atggaacaac
    18001 tcgggctgaa ccgaccgttg tttgaacaat acatcagcta catcaaaggt gtattgcacg
    18061 gtgatcttgg taactcattt cgtaacaacg aaccggtgct gaaggaattt tttaccctat
    18121 tcccagccac ggttgagttg gcattttttg ccctgctctg gtcgttgatt ttcggcatta
    18181 ttctcggtgt gattgctgcg gtgaaaaaag aaagttggat ttcacacact gtaaccacgc
    18241 tttcactgac cggctactca atgccaattt tctggtgggg cttgatttta attctttatt
    18301 tctccacccc gctcggctta ccggcttcag gtcgtttacc atctgaatac tggattgaag
    18361 ccgaaaccgg ttttatgctg attgatactt ggaattcgga cgaaccaggg gcatttttag
    18421 cggcaattaa atctctgatt ttgccgtcta tcgtactggg gacaatccct cttgcagttg
    18481 tgacccgaat gactcgctct tcaatgttgg aagtgttggg tgaagactat atccgcaccg
    18541 ccaaagccaa aggcttaaac actacccgaa ttgtgattgt tcacgcatta agaaatgcct
    18601 tgattccggt ggtaacggtc gttggcttaa ttgtcgggca actgctttca ggagccgttt
    18661 taacggaaaa catcttctcg tggccgggta tcggcaaatg gattattgat gcaatcaaca
    18721 gccgtgatta ccctgtacta caaggctcag tgctgattat tgctactatt attattttag
    18781 tgaaccttac ggtagatcta ctctatggca ttgtcaatcc gaggattcga catagttaga
    18841 aaaattcctt cgatttttcc cctctttagc aacgagggag ttacacaagc ggttcaaatt
    18901 ccgcaatttt ttacaagatt atttttagtt ggagttaatg atgtcaggaa taacggcggt
    18961 aaatccaccc gcacccaaaa caccgttaca ggagttttgg tactattttt gtcaaaatcg
    19021 gggggcatta ataggactta cctttattgc aatcgtcttt gttgcgtgcg tattcgcacc
    19081 ttgggttgcc ccttttgatc caatcgaaca aaatcgcagt gcgttattgc tccctcctgc
    19141 ttggcttgaa ggggggaatt ccgctcatct gctgggtact gacgatattg ggcgtgatat
    19201 tctttcccgt attatttatg gttcaagatt gtccgtcttt atcggcttag tcattgtgct
    19261 actttcttgc gtattcggcg tgattttagg tctacttgct ggctactatg gtggcacact
    19321 cgacatcatc attatgcgtt ttgttgatat tatgctggcg attccaagcc tgcttttaac
    19381 tatcggcgtg gtcactattt taggcccttc attgataaat gccgctattg cgattgcgat
    19441 tgtctccatt ccaagttatg ttcgcttgac ccgtgcttct gtattaagcg agaaaaaccg
    19501 tgattatgtt actgcttctc gtgttgctgg tgcgagcgtg cttcgcttaa tgtttgtggt
    19561 gattttacct aactgtttag ctccgcttat cgttcagatg acgatgggga tctcaaacgc
    19621 tattttagaa cttgccgccc tcggcttctt aggcattggt gcacagccgc caacaccgga
    19681 gcttggcaca atgcttgccg aatctcgtgg ctttatgcaa tcggcaaact ggctggtgac
    19741 cattccgggt ctagcgattt tatcgttagt attagctttc aacttaatgg gtgacggctt
    19801 gcgtgacgcc ctcgatccaa aactgaaaca ataggagatc taaaatggca ttattaacgg
    19861 ttgatcaact ttccgtccat tttggtgaaa ctaaaacacc atttaaagcg gtggatcgta
    19921 tcagttacga agtcaatgaa ggcgaagtat taggcattgt gggcgaatcc ggttcaggaa
    19981 aatcggtaag ttctctcgct attatgggct taatcgattt ccccggcagg gttatggctg
    20041 aaaaattgta ttttaacggc aatgatttat tggcattaaa accaaaagaa aaacaacaga
    20101 ttgtaggggc tgatgtctca atgatcttcc aagatgcaat gaccagctta aatccgagct
    20161 atactgtggg ctatcagatt atggaagccc taaaagtgca tcaaggtggc tcaaaagcca
    20221 gccgtcgtga gcgagcgatt gagttgctga cgatggtcgg tattcccgat cctgaatccc
    20281 gtttagaagt ttatccgcac cagctttcgg gtggtatgag ccagagagtg atgattgcga
    20341 tggcgattgc ctgtcgcccg aaattattga ttgccgatga gccgactact gcgttagatg
    20401 tgacgattca agctcaaatc attgatttat tacttgaatt acaacgcaaa gaaaatatgg
    20461 cgttgatttt aatcacgcac gatttagcgt tagttgccga gtctgcccat cgcattatcg
    20521 tgatgtatgc agggcaagtc gtggaagagg gcaaagccga gcagatattc aaagcaccac
    20581 tgcaccctta cacccaagca ttgctcaaag ccttaccgga atttgccgaa gggaaatccc
    20641 gcctgcaatc actaccgggc gtagtgccgg gcaaatatga ccgcccacaa ggttgcttac
    20701 tcaaccctcg ctgcccgtat gcaaccgaaa aatgccgaac cattgaaccg gcaatgcaga
    20761 taatcaacgg cagacaggtg aaatgccaca cgccactgaa tgcacagggt gagccgataa
    20821 ggatagctgt ataacgtcat aaagagtagg gacgcaatgc ttcgcgtccg ttacaagcgg
    20881 tgatttttaa ccgatttttg caaaataacg atagtggacg caaagcattg cgtccctaca
    20941 ttttccgaga aggaaaacag aatgaaagaa aataattctc tcccaccatt cctcaaagca
    21001 gtggacttaa aaaaatacta cccagttaaa aagggaatgt tcgctaaacc gaaaacggta
    21061 aaagcgctgg atggtgtctc ttttaccctt gaacgtggca aaacccttgc gattgttggc
    21121 gaatccggct gtggaaaatc aactttgggg cgaatgctca ctatgattga aagcccaacc
    21181 gaaggtgaac tgttctacaa cgggcagaat ttcttagtca atgacaaaga aacggctcaa
    21241 ctacgccgta aaaaaatcca aattgtgttt cagaacccgt atagctcgct caatccacgc
    21301 aaaaaagtag gtagcatttt agaagaacca ttattgatta acaccaactt atccgcaaaa
    21361 gaacgcaaag aaaaagtgtt ggaaatgatg gcgaaagtcg gcttaaaacc ggaattttac
    21421 gaccgttatc cgcatatgtt ttcgggcgga caacgccagc gaattgcgat tgctcggggc
    21481 ttaatgttgc agcctgatat tgtggttgcc gatgaacccg tttccgcatt agatgtttcg
    21541 gttcgggcgc aagtgttgaa tttgatgatg gatttgcaag aagaaatggg cttgtcttac
    21601 gttttcatct cgcacgattt atccgtagtg gaacatattg ccgatgaagt gatggtgatg
    21661 tatttagggc gttgcgtaga acaaggggat accaaaacta tcttcagcaa tccacgtcac
    21721 ccttatacac aagcgttact ctccgcaacc cctcgtttga acccggagca acgccgtgag
    21781 cggattaaac tgactggcga actaccaagc ccgcttaatc caccaaaagg ctgtgccttt
    21841 aacgcccgtt gcagatttgc aaccgatcgt tgctatgtgg agcgaccaga gctgaaaacc
    21901 tatcaagacg gtactcgcat tgcttgtttt gtggtggagg aaaataatta ggcaacgctc
    21961 gctatttaaa aggttaaagt ttttcaactt taacctttat ttttcatact taatactcct
    22021 catcttttgt agcaaaatct ttcattaatt tgctgatatg ctcacaatgg tgtttaaatg
    22081 acaatacggg caaataatca aatgcgtttt aacgccaatc ttctctttta aagtgagttt
    22141 tcgttccttt gagtcagaaa ttaaccttgt tacttgtcgg caattcatct atttctctcc
    22201 gttaatttcc ttgaaagaca ttgttgtaac tgcagccttg ctcgatagat taatgtatat
    22261 aaattatctg atgtaatatt tactactcga caaatttcat ctgaggttgc ctctaaatat
    22321 tccctcatca taaataccct agcttgtttt gcaggtaaat tgcttaagca aacttcaaat
    22381 aatatccaaa attctttgga ataaacagct tcttcctgcc agctagaagg ataatattct
    22441 tctttccaat gcccataatt atcaaaaaag tgattctctt cgtcatcatc agctagatca
    22501 ctttctagta ctatacg
//
LOCUS       DANLTI010000030        21981 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.030, whole genome shotgun sequence.
ACCESSION   DANLTI010000030 DANLTI010000000
VERSION     DANLTI010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21981
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.030"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..980)
                     /locus_tag="PXB09_000896"
     CDS             complement(<1..980)
                     /locus_tag="PXB09_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5233033.1"
                     /translation="MLFYLVSDSLTRLSLSNESLVDLGRITSIGNYPFLHNAKNAKFL
                     MVESAWQGYKNRWKYKIASYPDNPERTNEKLVRLVEKAKDKGIPTVFWNKEDSVHFDR
                     FIDSAKHFDHIFTVDQNAIARYREVVPATTTVNVGMFPVQPKIHNFQGFNFKHLAANF
                     VGSYSHHIHNKRRERQDMLFGAALKAGLPVTIFDRNSDRKSENYRYPKNSFNLNVQPN
                     VSYTETANIYRDYLVSLNINTVEDSPTMFSRRVVEILACGGILVSTPSMAIDNIFKEY
                     CHIVQSEDEAIELFQRLKRGASRDDLNKAIAGSEFVLSNFTWEHFLSQIQ"
     gene            complement(982..1788)
                     /locus_tag="PXB09_000897"
     CDS             complement(982..1788)
                     /locus_tag="PXB09_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233034.1"
                     /translation="MNIKDLLKEISFKAVINDLNFSSCLYIKPNTSKLYVILNGALIK
                     EPRNPLIYHRHSWHLEFDGSVLYIADPTLFKYESINLAWYVGDKDTDLYPYLAEFVTS
                     VATHLNVETDHIVTYGSSGGGFAALQLGARIGNGVVTVCINPQTNIMKYVPSHRNAFL
                     NACFDFNAEEYDSLSNQEKFNALVLLKENTSKILYIQNTQDEFHHKWHFLPFLELKGI
                     DLSEIEKTHWREQQSKDVKVILYSHESGHAAEPKEMIPEILSAVDQLIAS"
     gene            complement(1800..2867)
                     /locus_tag="PXB09_000898"
     CDS             complement(1800..2867)
                     /locus_tag="PXB09_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233035.1"
                     /translation="MKFILFDSILERHLGESLKRALESLGHQAVFTDLILHGHSMIYK
                     QADIDFMWKKVKDICDEKADMFISFRPMNLTTEMLEYIGKRMKTAIWLSDDPVLYKTC
                     YSQVVNHYDVLLHCGYKEVMDFYEANNHPKGFNFPFWTDHVAFPSVYNPLHSDYEIAF
                     LGNMNGQVRRKRYMELASLPFTKKVFGLIDSDPLAMHGGFINEAYLHTKRVTEVLSKA
                     KVGVSIPQFFTEYNGLDYDYPELAGLGYFQFPSRVIQYAASGLPIAAVGDERMKEVYP
                     EIFVGNSITELEPYIKQICEDYDFALSESAKILTRFRKNYSALSRAMMLIDLVENLDK
                     LQSQTTQERAILFTKYKAQYN"
     gene            complement(2869..4989)
                     /locus_tag="PXB09_000899"
     CDS             complement(2869..4989)
                     /locus_tag="PXB09_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5233036.1"
                     /translation="MKKKQQYRKSTINNTNASQQNSGEVLNSVNYQTLLEDYLNKISF
                     SNRQFIDELKTEHNKKLKELENKVSSLEQTNHVQQQDISRLNILLEQKNIEENRNLER
                     MISYQLGYALINACKSFSGFISLPSELLKIRKLAKDKKQQKLLPSSPVANTPKQQTAL
                     VTSAPARSQSIDLTRGLTLLDPISELCWADAFTGYPLVRKSYADHIAGSTCKFAFFES
                     AWQANKGSWIYAFTSPGLKHNNAQALLDAIQKLKDKSIPIIFWNKEDPMHYEMFKPIA
                     EKVDYVFTTDQLVVDKYKKELGHSNIWALPFAAPIKVTNPIGRFSLDTETVCFAGTYY
                     AQNHENRKKQMDMLLPALLAYNGCIYDRASKDTSGKYAYPEQYTHLIREGVNFNEIVK
                     LYKKFKVFLNVNTITQSTTMMSRRVYELLASGTPVVSTPSKAITAQFPGIVITVNNEK
                     EAELAVHKLLTDSYYWHKQSMLGIREVMSKHTYENRWEFACSVINNEPIKEKTPSVRI
                     IAVYHNYLDLAIYIDSLIHQNNVDIKEVVLLISSSLVLDKELLDGYSDKVKVVTLSEF
                     NLKNYLDDEVSYTYFTDDNVLNYRNSIYGLVATLNYCNTEAVTRRLYYKLSSLNKIMD
                     FSITQEDWYRSVTETQRNCVLIKNSAIEDYSINLTANKIQAKNSPIFIADPFNVLYID
                     DKKLLKGRDSLLKLVYKTSPYLGV"
     gene            complement(4993..6264)
                     /gene="wecC"
                     /locus_tag="PXB09_000900"
     CDS             complement(4993..6264)
                     /gene="wecC"
                     /locus_tag="PXB09_000900"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5233037.1"
                     /translation="MSNFNTISVVGLGYIGLPTATVFAQHGLNVIGVDVNQHAVDHIN
                     QGKIHIVEPDLDVAVHQCVSSGKLKATLTPEPAEAFLIAVPTPFKGEDYEPDLSYIQA
                     ACKAIAPVLEKGNLVILESTSPVGATEQMAEWLAEYRPELSFPQQAGEDSDIRIAHCP
                     ERVLPGQVMHELIENDRIVGGMTNKCSVQAVNLYKTFVKGDCIVTNARTAEMCKLTEN
                     SFRDVNIAFANELSIICDRLDINVWELIALANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VNKTPDLAKIIRTAREVNDHKPEWVISKMNEAVIYALQKTGKSIDQIKIACLGLAFKP
                     DIDDLRESPALKITEKLAEKYPNQVFAVEPNVEELPKKLANKNISLISVDEALEVADV
                     VVVLVDHSEFKLVKPVFLNDICVVDTKGIWR"
     gene            complement(6279..7394)
                     /gene="wecB"
                     /locus_tag="PXB09_000901"
     CDS             complement(6279..7394)
                     /gene="wecB"
                     /locus_tag="PXB09_000901"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015703970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDL5233038.1"
                     /translation="MRYLIVFGTRPEAIKMAPLVEGFKKSGLNFKVCVTAQHRQMLDQ
                     VLELFEITPDYDLDIMSNKQTLSTVTSAILEKIQPVIAEYKPTTIFVHGDTATTLASS
                     LAAYYNQIDIAHIEAGLRTHNIYSPWPEEGNRKLTAALAKYHFAPTQSTKKNLLNENI
                     AEGTIYVTGNTVIDALFLACKKLDENIDLLSSLQEKFSYIKSKRTILITGHRRENFGN
                     GFENICKAVSTLASDFPDVQFIYPVHLNPNVREPVNRLLADKSNVHLIEPCDYLSFVY
                     LMRESYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGTAQSEIIKQV
                     TELLNDQAAYTKMSEAHNPYGDGTAVKQILSVFQSKQ"
     gene            7627..9717
                     /locus_tag="PXB09_000902"
     CDS             7627..9717
                     /locus_tag="PXB09_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDL5233039.1"
                     /translation="MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQ
                     IIGWGLRPSAVGSRAYAQKHQLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDT
                     TCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV
                     IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQ
                     YTDRVRIITEDVNPASLIKLCEKVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDD
                     RNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSIFDVIDYLYKAKRLN
                     QRLSGNLYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGK
                     ADVLQFAQQNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQIL
                     LSAEHFSETDLSYAETLRQKLVASHIGKYNVGGGDVKFNAQGKKIILVPGQVEDDASI
                     KSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFADQMVDN
                     ANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSL
                     TLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKL
                     QHLYRAFKYASHTK"
     gene            9740..10972
                     /locus_tag="PXB09_000903"
     CDS             9740..10972
                     /locus_tag="PXB09_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5233040.1"
                     /translation="MEHYLDELIINSQRILLLQGPIGSFFTEFARWLESEQKEVFKLN
                     FNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQTHQIDNILCFGDNRYYHKVAKNV
                     CLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
                     GFRCMAGKAIPYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGF
                     AKRVEKGEFGEFFIVPLQVYDDTQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIK
                     HHPMDRGFIDYKMVIYEFLEQYPQLNGRVFYIHDVPLPVFLRYGKGMVTLNSTSGLSA
                     LLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNF
                     YHKSILRYPYNWENEAHR"
     gene            11053..12114
                     /locus_tag="PXB09_000904"
     CDS             11053..12114
                     /locus_tag="PXB09_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5233041.1"
                     /translation="MAIYAIWNNKGGVGKSYLTFQIACEYAKQYPAKKVLVVDLCPQA
                     NSSSMLLGGIEKGEQELAKIHSQVNKNTISGYISERLVSPYRSINSATKYVTQVSTIN
                     EYVPKNVYLVVGDEELEIQSSGILHASQAVHVPDSWRLVHLWVRDLVSDIQNAWDNDD
                     NVVFIDCNPSFTIYTELALAASDRLIIPFSADGSSKRAVKSVLSLVYGVKRHSGDVSS
                     HFYTESQKSKLALPQIYMYVGNRLTINAKASATAFKTVVEEIGDEIYNIWKTNANLFC
                     IHPAGVGTPTNKSSFRKMFQYEVRDANTASVVSGALGIPISRLSSGKRDVLGKNVMVN
                     QSQLDAQVPNIQNLVQCIE"
     gene            12266..13918
                     /locus_tag="PXB09_000905"
     CDS             12266..13918
                     /locus_tag="PXB09_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDL5233042.1"
                     /translation="MTIFQVAQNWLAQDPDAETRAELEQLIQAAESDEKAKAELTARF
                     DGRLQFGTAGLRGRLQAGSMGMNRVLVAQAASGLAGFIKGYDKEPSIVIGYDGRKNSD
                     VFARDTAEIMAAAGIKTYLLPRKLPTPVLAYAIQYFDTTAGVMVTASHNPPEDNGYKV
                     YLGKANGGGQIVSPADKEIAALIDKVAAGDIRDLPRSQDFTVLDDEVVNAYIEKTASL
                     AKRPKAEINYVYTAMHGVGYEVLSKTLEKAGLPQPYLVSEQIQPDGSFPTVNFPNPEE
                     KGALDLAIKLAKEKNAEFIIANDPDADRLAVAVPDAQGNWKPLHGNVIGCFLGWYLAK
                     QFHAQGKQGVLACSLVSSPALAEIAKKYGLSSEETLTGFKYIGKVENLLFGFEEALGY
                     LVDPDKVRDKDGISAAIMFLDLVCSLKQEGKTLADYTTEFVQEFGAYVSGQISIRVCD
                     LAEIGKLMTALRNNPPSEIGGFKVAEFIDHTKTTRQNDILVFVLENGSRLIARPSGTE
                     PKIKFYLDARGTDAENAEQVLAQFDESVRSLLRQEEYGKQDC"
     gene            13971..14905
                     /locus_tag="PXB09_000906"
                     /pseudo
     CDS             13971..14905
                     /locus_tag="PXB09_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250489.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(14927..17008)
                     /gene="recG"
                     /locus_tag="PXB09_000907"
     CDS             complement(14927..17008)
                     /gene="recG"
                     /locus_tag="PXB09_000907"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDL5233043.1"
                     /translation="MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRY
                     EDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPILSVTLSDSTSKIMLKFFNFNAG
                     MKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ
                     ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDH
                     PAQKRLIFEELLAHNLAMQQLRLGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRV
                     TADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQVALMAPTEILAEQHA
                     NNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLA
                     LVIIDEQHRFGVHQRLTLREKGAKENNYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
                     LPPGRTPITTVVISEDRRAEIVQRVYQVCKQEHRQAYWVCTLIDESEVLEAQAAAAIA
                     EDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVPNASLMI
                     IENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAE
                     KDLEIRGTGEILGTKQTGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKR
                     WLDNKAEYTNA"
     gene            complement(17012..17440)
                     /locus_tag="PXB09_000908"
     CDS             complement(17012..17440)
                     /locus_tag="PXB09_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5233044.1"
                     /translation="MYRYLFDTNIVSELYKLRNDKMDVNVRQWLRGVNPSQTNISCIT
                     LSEIKTGILLKARKDKEQSDRLNDWFENNVLKAYQTKAFVVNNDIALLASEYHIPNKM
                     DLNDAYIAATAKYHNLILVTRNTKDFIRCDVRLFNPFETA"
     gene            complement(17440..17727)
                     /locus_tag="PXB09_000909"
     CDS             complement(17440..17727)
                     /locus_tag="PXB09_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5233045.1"
                     /translation="MAITITSREFNQNASKVLKMAEKEPVFITKWGKIVNVVSSYMDY
                     QQKKPSEPSFEELFASSENEDVSDEFWQEFEQTLVEIRKSNKPRPVDFGDE"
     gene            17891..19774
                     /gene="htpG"
                     /locus_tag="PXB09_000910"
     CDS             17891..19774
                     /gene="htpG"
                     /locus_tag="PXB09_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDL5233046.1"
                     /translation="MANNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAA
                     DKLRFKALSEPALYEGDGELRVRVSVDETLGTITIADNGIGMTREQVIDHLGTIAKSG
                     TKEFLNALGTDQAKDSQLIGQFGVGFYSSFIVADKVTVKTRAAGVPAEQGVIWESAGE
                     GDYTVADLEKKERGTEIILHLREDEKEFLNEWRLREIIGKYSDHIGLAVEIQTNEYDD
                     EGKASGQKWEKINKAQALWTRSKNEISDEEYTEFYKHLSHDFADPLIWSHNKVEGKQE
                     YTSLLYVPSKAPWDLFQREQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLP
                     LNVSREILQENKVTQSLRSALTKRALQLLEKLAKDDAEKYAQFWQAFGVVLKEGVGED
                     FANKQQVAGLLRFASTQRDDSEQAVSFADYIARMKEGQKAIYFLTADSYQAAKNSPHL
                     ELFHKKGIEVLLLSDRIDEWLVSHLTEFDGKPLQSITKSDLDLGELADKQEEESQKAQ
                     QAEFGSFLERAKGYFGERVKNVVLTHRLTDTPAVVSTDSDEMTTQMAKLFAAMGQQAP
                     EVKYTFELNPDHPMVKKVADLADEAEFADWIELLFEQALLAERGTLENPTAFIKRVNK
                     LLG"
     gene            20152..21867
                     /gene="proS"
                     /locus_tag="PXB09_000911"
     CDS             20152..21867
                     /gene="proS"
                     /locus_tag="PXB09_000911"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDL5233047.1"
                     /translation="MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLP
                     TGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGER
                     DFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDA
                     YSFHTTQESLQETYDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGE
                     DDVVFSTESDFAANIELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKT
                     VKTLVVKGATEEQPLIALVIRGDHELNEIKAQKHPLVADPLEFADEAEIKAKIGAGVG
                     SLGVVNMPIPVIIDRSVALMSDFGCGANIDGKHYFNVNWERDVAVPEIADLRNVVEGD
                     PSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVV
                     AAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIF
                     DDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK
                     ANVKA"
BASE COUNT         6613 a         4169 c         4542 g         6657 t
ORIGIN      
        1 ttctgtattt gggataagaa atgttcccaa gtaaagttac tcaatacaaa ttcagagcct
       61 gcaatcgctt tattcaaatc atcacgagaa gcacctcgtt ttaaacgttg gaataattct
      121 atagcctcat cttcactttg tacgatatga caatattctt taaatatatt gtcgatagcc
      181 atacttggtg tagagactaa tattcctcca caagctaata tttcaacgac tctgcgagaa
      241 aacatcgtag gggaatcttc gacagtatta atattcaaag aaacaagata atcacgataa
      301 atattagcag tttcagtata actaacatta ggttgaacat ttaaattaaa gctatttttt
      361 gggtaacgat aattttccga ttttctatca gagtttctat caaagatggt taccggaaga
      421 cctgctttaa gtgctgcacc aaacaacata tcctgtcttt ctctacgctt attgtggata
      481 tgatgactgt aactccctac aaaatttgcg gcaaggtgtt taaaattaaa tccttgaaag
      541 ttatggattt tgggctgaac agggaacatt ccgacattga cggttgttgt cgcaggcact
      601 acttccctat aacgagcaat ggcattttga tctacggtaa aaatatgatc aaaatgcttc
      661 gccgaatcaa taaatcgatc aaaatgcaca gaatcttctt tgttccaaaa gaccgttgga
      721 atgcctttat ccttcgcttt ttctactaaa cgaaccaact tttcattggt tcgttcagga
      781 ttatcaggat aagaggcaat tttatatttc caacggtttt tgtagccttg ccaggcggat
      841 tcgaccataa gaaatttagc attctttgca ttatgcaaga aaggataatt tcctatagat
      901 gttattcttc caagatcaac taggctttca tttgataatg aaagcctagt taaagaatca
      961 gataccaaat aaaacagcat tttagctagc tatcagttga tcaacagcgg ataatatctc
     1021 gggaatcatt tccttaggtt cagctgcatg acctgattca tgagaataca aaataacttt
     1081 tacatctttg ctctgttgtt ctctccaatg ggtcttttct atttccgata gatctatccc
     1141 ctttaactct aggaatggga ggaaatgcca tttatgatga aattcatcct gagtattttg
     1201 aatatacaaa atctttgatg tattttcctt aagtaatact aaagcattaa atttctcttg
     1261 attagaaaga ctatcgtact cttccgcatt aaagtcaaag caagcgttta aaaaggcatt
     1321 acgatgactt ggtacatatt tcatgatgtt ggtttgtgga ttaatacaaa cggtaactac
     1381 accgtttcca attcttgctc ccaactgtaa tgcagcaaat ccaccaccac ttgaaccata
     1441 agtaacaata tggtctgtct caacattcaa atgtgtagca acagaagtta caaattcagc
     1501 taagtatgga tataaatcag tatctttatc tccaacatac caagccaaat taattgattc
     1561 atatttaaat aatgttggat ctgcgatata tagaactgag ccatcaaatt ctagatgcca
     1621 actatgtcta tgataaatta agggatttct gggttctttg attaatgcac catttaatat
     1681 cacatataat tttgatgtat taggtttgat atatagacac gatgaaaaat taagatcatt
     1741 aattacagct ttaaagctga tctctttaag taagtcttta atattcataa agtttactcc
     1801 tagttgtatt gagctttata tttagtaaat aaaattgcgc gctcttgtgt tgtctggctc
     1861 tgtagtttgt ctaaattttc taccaaatca atcaacatca tggcacggga taaggcagaa
     1921 tagttctttc taaatctagt tagaatttta gccgattctg atagtgcaaa atcataatct
     1981 tcacaaattt gtttaatgta cggctccagc tctgtaatac tattgccaac aaagatttca
     2041 ggataaactt ccttcattct ctcatcacca accgctgcaa taggtaaccc acttgcagca
     2101 tattggataa ctcgactagg aaattggaaa tatcctaaac ccgccaattc aggataatca
     2161 taatctaaac cattatattc ggtaaagaat tgtgggatac tcaccccaac ttttgcctta
     2221 gataaaacct ctgttacacg ttttgtatgt aaatatgctt cattgataaa tccaccatgc
     2281 attgctaatg gatctgaatc tattaaaccg aatacttttt tggtaaatgg taatgaagcc
     2341 aattccatgt atcttttgcg tctaacttgc ccattcatat tacctaaaaa tgcaatctca
     2401 taatcagaat gaagcgggtt atatacactt ggaaatgcta catgatctgt ccaaaacgga
     2461 aaattaaagc cttttggatg gttattagct tcataaaaat ccataacttc tttatatccg
     2521 caatgtaata atacatcata atgatttact acttgagaat agcaagtttt atataaaaca
     2581 gggtcatctg aaagccaaat agcggtcttc attcgcttgc ctatatactc aagcatttct
     2641 gtcgttagat tcatcggccg aaatgagata aacatatctg ctttttcatc acaaatatct
     2701 tttacttttt tccacatgaa atctatgtcc gcttgtttat aaatcataga atggccgtgc
     2761 aaaattaaat ctgtaaatac tgcttgatgc cctaacgact ccaaagctct ttttaaactt
     2821 tcgcccaaat gacgttctaa aatagaatca aataaaataa acttcatatt aaacccctaa
     2881 atatggagaa gtcttataaa ccaatttaag taaggaatct ctacctttca ataacttttt
     2941 atcatctata tatagcacat taaatggatc agctataaag ataggtgaat ttttagcctg
     3001 aattttattg gccgtaagat tgattgaata atcttcaata gcactatttt taattaaaac
     3061 acaattacgt tgagtttctg taacacttct gtaccagtct tcctgagtaa ttgaaaagtc
     3121 cattatttta ttcaatgatg ataatttata gtacaatctt ctggttactg cttctgtatt
     3181 acaataatta agtgttgcta ccaatccata aatagaatta cgataattta ggacattatc
     3241 atcggtgaaa taagtgtaag aaacttcatc atctaaatag tttttcagat taaactcaga
     3301 aagagtaact actttcactt tatcggaata accatctaat aattctttat ctaaaacaag
     3361 tgaagatgaa ataagtaata caacctcttt aatatcaaca ttattttgat gaattagaga
     3421 atctatatag atagctaaat ctagataatt atgataaacc gcgataattc gaacactagg
     3481 tgttttttcc tttattggtt cattattgat tacactacac gcaaattccc aacgattttc
     3541 ataagtatgt tttgacatta cttcacgtat gcccagcatg gactgcttat gccaataata
     3601 gctatctgtc agtaatttat ggacagcaag ctcagcttct ttctcattat ttacagtaat
     3661 aacaatgcca gggaattgtg ccgtaatagc tttagatggc gtagatacaa caggtgtgcc
     3721 gctagctaga agttcataca cacgtcttga catcattgtg gttgattgag tgatggtatt
     3781 aacatttaaa aatactttaa atttcttata caacttaact atctcattga aatttacccc
     3841 ttctcggata agatgagtgt attgttcagg ataagcatat ttgccacttg tatctttaga
     3901 tgctctatca taaatacagc cgttgtaagc caataatgca ggtaacaaca tatccatctg
     3961 ttttttacga ttttcatgat tttgagcata atatgttcca gcaaaacaaa ctgtttctgt
     4021 atcaagagaa aatctgccaa ttggattggt tactttaatt ggggcagcaa aaggcaaagc
     4081 ccaaatattt gaatgcccaa gttctttttt atatttatct acaaccaatt gatctgttgt
     4141 aaaaacataa tctacttttt ctgcgattgg cttaaacatc tcataatgca ttggatcttc
     4201 tttattccaa aaaatgatag gaatgctttt atcttttagt ttctgaattg catctaacaa
     4261 tgcttgagca ttattatgtt ttaagcctgg tgaagtaaaa gcatagatcc atgacccttt
     4321 atttgcctgc caagcacttt caaaaaaagc aaatttacac gtgctgccag caatatgatc
     4381 agcataagat tttctaacta aaggataccc tgtaaaggca tctgcccagc ataattcaga
     4441 aataggatcc agtagtgtca atcctcttgt caagtcaata gattgagatc gggcaggtgc
     4501 acttgtaact aatgcagtct gttgctttgg tgtatttgca acaggggaag atggcaataa
     4561 tttctgctgt ttcttatcct tagctaactt cctgattttt aataattctg aaggcaagga
     4621 tataaaacca ctaaatgatt tacaagcgtt tattaaagca tatcctaact gataagaaat
     4681 cattctttca agatttctat tttcttcaat gttcttttgc tctaacaaaa tatttaatct
     4741 ggatatgtct tgctgttgaa catgattagt ttgctcaagg ctgcttactt tattttctag
     4801 ctccttgagc tttttattat gctcagtttt cagctcatct ataaactgcc gattactaaa
     4861 actaatttta tttaaataat cttccagtaa tgtttgataa ttgacagaat ttaatacttc
     4921 gcctgaattt tgttgtgatg cattagtatt gttaatagtg gatttacgat attgctgttt
     4981 ctttttcatc acttatctcc aaattccttt agtatccacc acacaaatat cattcaaaaa
     5041 cacaggtttg actagtttaa attcgctatg atccaccaaa acaactacaa catcagctac
     5101 ttccagagct tcatcaacag aaatcaaaga aatgttcttg ttagccaatt ttttcggtag
     5161 ctcttcaaca ttcggctcaa ctgcaaatac ttgatttgga tacttttccg ccaatttttc
     5221 agtaattttt aatgccggac tttcacgcaa atcgtcaata tcaggcttga atgccaaccc
     5281 taaacaagca attttgattt gatcgataga tttacctgtt ttttgtaagg cataaattac
     5341 cgcttcattc atctttgaga taacccattc aggtttatga tcgtttacct cacgagcagt
     5401 gcggataatt tttgccaagt caggagtttt attcacaata aaccaaggat ctacagcaat
     5461 gcagtgtcca cctacaccac aacccggttg taagatattg actcgagggt gtctgttagc
     5521 caaagcaatt agttcccata cattaatatc taggcgatca caaataatag aaagctcatt
     5581 tgcaaaagcg atattgacat cacggaaact attttcggtt aatttacaca tttctgcggt
     5641 acgggcattg gtaactatac agtcgccttt tacaaaagtt ttgtataaat tgaccgcttg
     5701 cacagagcat ttatttgtca taccacccac aatacggtcg ttttcaatca attcatgcat
     5761 cacttgtcct ggtagaactc gttctgggca atgggcgata cgaatatcag aatcttcacc
     5821 tgcttgctga gggaagctta gctctggacg gtactcggca agccactcag ccatctgttc
     5881 tgttgcacca accggagagg ttgattctaa aatgactaaa ttaccttttt ccagcacagg
     5941 tgcaattgct ttgcaagcag cttgaatata acttaaatca ggctcataat cctcgccttt
     6001 aaaaggcgtt ggtacagcaa ttaaaaatgc ttctgctggt tcaggtgtca gtgtggcttt
     6061 taattttccg ctagatacac attggtgaac agcaacatct aaatcaggct cgacaatgtg
     6121 aattttccct tgattgatat ggtctacggc gtgctgatta acatctacgc caattacatt
     6181 tagaccgtgt tgggcaaata cagtggcggt tggtaagcca atatagccta agcctactac
     6241 tgaaatggta ttaaagttcg acatacattt atcccttatt attgttttga ttgaaatact
     6301 gagagaattt gtttcacagc tgtgccatcg ccataagggt tgtgagcctc agacattttt
     6361 gtataagcag cttgatcatt gagtaactca gtaacttgtt taataatttc agattgtgca
     6421 gttccaacaa gttttactgt tccggcttct acagcttccg gtctttctgt tgtgtctctc
     6481 attactaata ccggttttcc taatgatggg gcttcttctt gaatacctcc ggagtcagtt
     6541 aagataaggt aagactctct cattaaataa acaaaggaga gatagtcgca aggctcaatg
     6601 agatgcacat tggatttatc cgctaatagg cgattgaccg gttctcttac atttgggttg
     6661 aggtgtacgg ggtagataaa ttgaacgtca gggaaatcag acgctaatgt tgaaacggct
     6721 ttacagatgt tctcaaaacc attaccgaaa ttttcgcggc gatgtccggt gatcaaaata
     6781 gtacgcttac tttttatata agaaaatttc tcttgtagcg agcttaataa atcaatattt
     6841 tcatctaatt ttttgcaagc gaggaataag gcatcaatta ccgtattacc cgttacataa
     6901 atggtgccct cagcaatatt ttcgttgagt agatttttct tggtgctttg tgttggtgcg
     6961 aaatggtatt ttgccaaagc agctgttaat ttgcgattgc cttcttccgg ccaaggagag
     7021 tagatattat gcgttcttag acctgcctca atatgagcga tatcaatttg gttgtaatag
     7081 gctgctaatg aagaggcaag agtggttgct gtatcgccat gaacaaaaat agtagttggt
     7141 ttgtattcgg caataacagg ttgaattttt tctaaaatag cagaagttac agtagaaagt
     7201 gtttgcttat tgctcataat atccaggtca taatctggag taatttcgaa taattctaaa
     7261 acttggtcca gcatttggcg gtgctgagca gtaacacaga ctttaaaatt tagaccgctt
     7321 ttcttaaagc cctcaactaa gggagccatt ttgattgcct caggacgagt accgaagacg
     7381 atgagatagc gcatttatta ctcctttaaa aatatagata aaactaaaat acactagatg
     7441 taagtaattt tgttaaatta gttataaaga tcgtgttcat tataatgttt ttatggagtt
     7501 aggtgtataa aaacttttac tttgtagata ttttatgtaa attcttgtaa gtatccggta
     7561 ggttagaaat tatcatgtta tctgctatgg tacaatacat aaatacgaat atgagattaa
     7621 ttttttatgc ttagctattt agtgtttttt agtaaaatta taaaaatccc taatttaaaa
     7681 ggttttttac ctcattgtga aattaggcga agacctcttg tgggaaaaac ctttattgct
     7741 caaaaaagac cgaaccaaat catcggctgg gggcttcgtc cttcagcggt gggatcaaga
     7801 gcttatgcac aaaaacatca acttccctat attgcattag aagacggctt tttacgctca
     7861 ctagggctgg gtgtaaaagg ctatccgcca ttttctttag tttatgatga tataggtatt
     7921 tattacgata ccacctgtcc ttctcgttta gaaaagttat tgcttgaaaa acctttacag
     7981 gatcaagagc aaatcaagct tgcagagaga gcattatctc aaatcttaac ttacggactt
     8041 tctaaatata atcacgcact agattttagt gaaatcccct ctgccaaaga aaaaatcgtg
     8101 ttagttattg accaaacctt tggtgatatg gcggtgaaat atggtcaagc gagtgaagtg
     8161 gatttcaata aaatgttgga aacggcaatc agtgagaatc cagaggctca aatttgggta
     8221 aaaactcacc ccgatgtatt aagtggcaag aagaaaggct atttgaccga tttacctcaa
     8281 tatactgata gggtcagaat tattactgaa gatgtgaatc cggcaagttt gattaaattg
     8341 tgtgagaaag tctattgcgt aacttcgcaa atggggtttg aggcattatt attaggtaaa
     8401 aaagtggtta cctttggtgt accgtggttt gccggttggg gggtaacaga tgatcgtaac
     8461 gaagcggttc aactattagt tcaacaaaat agacggaaag atcgttcatt actgcaactt
     8521 ttttatgctg cgtattttga ttacagccgt tatattaatc cgaataccgg tgagaaaggc
     8581 tctatttttg atgtcatcga ttatctatat aaagccaaaa gattaaatca gcgcttaagt
     8641 gggaatctat actgtattgg tatgtcgcta tggaaacagg cggtaattaa gccgtttttt
     8701 aatttgccac aatgtcgatt acattttgtt cgttcgctaa attctttaaa aaaacgaccg
     8761 cttgcagata atgcaaaaat tttagtttgg agcaatggca aagcggatgt cttgcaattt
     8821 gcacagcaga ataatattcc attgttaaga atggaagatg gattcattcg ctctgtcgga
     8881 ctaggcgcta atttagttgc accgctttct ttagtagtcg atgatttagg catttatttt
     8941 aatgcagaga acacttcacg attagaacaa attttattga gtgcagagca tttttctgaa
     9001 actgatttgt cttatgctga aacattaagg cagaaattgg tggctagcca tattggaaaa
     9061 tataatgtgg gcggtggcga tgtaaaattt aatgctcaag gtaaaaaaat aattcttgta
     9121 ccggggcagg tagaagatga cgcttcgatc aaatcaggtt ctccacaaat taaaagaaat
     9181 ctggatttac tgaaaaaagt gagggaatta aaccctagtg cctatattat ttataagcct
     9241 caccctgatg tggtaagtgg taatcgagtc ggtcagattc ctacggcaga aacacgcagg
     9301 tttgcggatc agatggtgga taatgccaat attttagatt gtattttaat tgcagatgaa
     9361 gtgcatacaa tgacatcttt agccggtttc gaagcattat taagaggtaa aaaagtgcat
     9421 tgctacggat taccttttta tgctggttgg ggattgacgg aagatagatt gaagtcggca
     9481 cgcagaggta aatctttgac attatctcag ttaattgccg caacattgat atattaccct
     9541 ctgtatgttg atcctataag caggcagttt attgatgcca atcaagcgat tcatatattg
     9601 tcacaacaga aacgaaacct aaccaatcaa aggattaaac gttcttgggt gagtaaacaa
     9661 tatggaaaat tacagcatct ttatcgtgcg tttaaatatg cttcccacac taaataagcg
     9721 tagagggtag gaaattaaga tggaacatta tttagatgag ctaatcatca atagccagag
     9781 aattttattg ttacaaggcc cgataggctc ttttttcact gagtttgccc gttggttaga
     9841 aagtgagcaa aaagaggtct tcaagttaaa ttttaatggc ggagatgaat atttctatcc
     9901 aaataatagc ccgaatactt ttccttacta tgatagctta gataattttg aagcctattt
     9961 aattcagttt tgccaaactc atcaaataga taatatctta tgttttggcg ataatcgtta
    10021 ttatcataaa gtggctaaaa acgtttgctt gaagttaaag ttggtctttt gggcgtttga
    10081 agaagggtac tttaggccag aatatattac gttggaaaaa tggggtgtaa atgctttttc
    10141 tccaatccct aaaaatcaca ctttcttttt gccttatgcc gagttaccag tagtcagtga
    10201 accagaaaaa gtatctaaag gctttagatg tatggcggga aaagcaatcc cgtactattg
    10261 gaatgcctat aaaaaacgta aagcatacgc aaaatatcag catcatcgtt ttctgaatct
    10321 caaatactac cttaatttat ggacaaggtc gggaattaag cgaatatgtt attggttaca
    10381 tgataaaggc tttgccaagc gggtagaaaa aggagagttt ggtgaatttt tcattgtgcc
    10441 tctacaagtt tatgatgaca ctcaagtgag gattcatagt gaacaaaaaa gtgtagagcg
    10501 ttttttaagg gaagttctga attcctttgc caaatttgca ccggcacatc tcaatttaat
    10561 tattaagcat cacccgatgg atagaggatt tatagattat aaaatggtga tttatgaatt
    10621 cttagagcaa tatccccaat taaacggtag agttttttat attcacgatg tgccgttacc
    10681 tgtcttttta cgttatggga aaggaatggt gactttaaat tcaaccagtg ggctttctgc
    10741 attgctccat aatatgccgg tcaaaacctt aggtagagcc aattatgatt ttgagggatt
    10801 aaccgataaa cagccattag atactttttg ggctaatcct cagccaccta attcggaagt
    10861 atttaaaggc tacagacaat ttcatttaca taaaacgcat attaacggta atttttacca
    10921 taaatcgatt ttgcgttatc cttataattg ggaaaatgaa gcacacaggt gatggaaaat
    10981 attaaaataa gtaatatctt atagctaaat tattgtgtta ttattacacc tattgttaaa
    11041 agagggggca ttatggctat ttatgcaata tggaataata aaggtggggt tggtaaaagt
    11101 tatttaactt ttcaaatcgc ttgtgagtat gcaaaacaat acccagcaaa aaaagttctc
    11161 gttgttgatt tatgtcctca agcaaattca tcatctatgc tattaggcgg cattgaaaaa
    11221 ggtgagcaag agttagcaaa aattcattct caagtaaaca agaatactat ttcaggatat
    11281 atttcagaaa gattagtaag tccttaccgt tctattaata gtgcaacgaa atatgtaact
    11341 caagttagca ctataaatga atatgtacca aaaaatgttt atcttgttgt tggtgatgag
    11401 gaattagaaa tccaatcatc tggtatttta catgcttccc aagctgttca tgttcctgat
    11461 tcttggcggc tagtgcatct ttgggtgcgt gatttagttt ctgatataca gaacgcttgg
    11521 gataatgatg ataacgttgt atttattgat tgcaatccaa gtttcactat ttatactgaa
    11581 ttagcgttgg ctgcttcaga tagattgatc atcccttttt ccgctgatgg ttcatcaaaa
    11641 cgagctgtta agtctgtatt atctctagta tatggggtta aaaggcactc tggggatgtc
    11701 agctctcatt tttatacaga atctcaaaag agtaagttag cattacctca aatttatatg
    11761 tatgtaggta atagattaac gataaatgcc aaagcatcag caaccgcatt taaaacagtt
    11821 gtagaggaaa taggtgatga aatctataat atatggaaaa ctaatgctaa tttgttctgt
    11881 attcacccag caggtgttgg tactcctaca aataaatcaa gcttcagaaa aatgtttcag
    11941 tatgaggtga gagatgcaaa tacagcatct gttgtttcag gtgctttagg tattccaatt
    12001 agtcgcttat catcaggaaa aagagatgtt ttaggtaaaa atgtaatggt gaatcagtca
    12061 caattagatg ctcaagttcc taacattcaa aatcttgttc agtgtataga ataaagaaaa
    12121 atagcgtata ttaagtacgc tattttttat ttctgacaaa tctttttatt tgatagctcg
    12181 atcacaaaaa aagaaatatc tccttttaaa taaaaggact ttgggctaat ctaaacagag
    12241 tttttaaatt acataggagt aaaaaatgac tattttccaa gttgcacaaa attggttagc
    12301 ccaagacccg gatgcagaga cccgtgcgga attagagcag ttaattcaag cggcagaatc
    12361 ggacgagaaa gcaaaagcag aattaacagc ccgttttgac ggacgtttac agtttggtac
    12421 ggctggtttg cgtggtcgct tacaagcggg ttcaatgggt atgaaccgtg ttttggtggc
    12481 acaagctgcc agcggtttag ctgggtttat taaaggttat gataaagagc cgtcaattgt
    12541 tattggttat gacggtcgta aaaattccga tgtgtttgcc cgtgacaccg ctgaaattat
    12601 ggcagcggca ggcattaaaa cgtacctgct tcctcgcaaa ttgccaacac cagtgcttgc
    12661 ctatgcgatt caatattttg ataccacagc cggtgtgatg gtaactgcca gccacaaccc
    12721 accggaagat aacggctata aagtttattt aggtaaagcc aacggtggcg gacaaattgt
    12781 ttcgccggca gataaagaaa ttgctgctct gattgataaa gtagcagcag gcgatattcg
    12841 tgatttacct cgtagccaag atttcacggt gttagacgat gaagtggtaa atgcttatat
    12901 tgagaaaacc gcctcactag ccaaacggcc aaaagccgaa ataaactacg tttacactgc
    12961 aatgcacggt gtgggctatg aagtgttaag caaaacatta gaaaaagccg gcttaccgca
    13021 accgtattta gttagtgagc agattcagcc ggacggttcg ttcccaacgg ttaatttccc
    13081 gaacccggaa gagaaagggg cgttagattt agcgattaaa ttggcgaaag agaaaaatgc
    13141 cgaatttatt atcgccaacg acccggatgc tgaccgttta gcggtagccg tgcctgatgc
    13201 tcaaggcaac tggaaaccac tgcatggcaa tgtgatcggc tgtttcttag gctggtattt
    13261 agccaaacaa ttccacgcac aaggtaaaca aggcgtgttg gcttgctcgt tagtatcctc
    13321 tccggcgtta gctgaaattg cgaaaaaata tggtttaagc tcggaagaaa ccttaaccgg
    13381 ctttaaatat atcggaaaag ttgaaaacct attatttggc tttgaagaag ccttaggtta
    13441 tttggttgac ccagacaaag tgcgtgataa agacggcatt tccgctgcca ttatgttctt
    13501 agatttagtg tgcagcctca aacaagaagg taaaaccctt gcggattaca ccaccgagtt
    13561 tgtacaagag ttcggggctt atgtaagcgg tcaaatttcg atcagagttt gtgatttagc
    13621 cgaaatcggc aaattaatga cggcgttacg caacaatcct ccaagcgaaa ttggtggctt
    13681 taaagtggct gagtttattg accataccaa aaccacacgc caaaatgaca ttttagtgtt
    13741 tgtgttggaa aatggcagcc gtttgattgc tcgcccttca ggtactgagc cgaaaattaa
    13801 attctattta gatgctcgtg gcacagacgc tgaaaacgca gagcaagtgc tggctcagtt
    13861 tgacgaaagt gtgcgttcgc tgcttcgcca agaagaatac ggcaaacaag attgctaatg
    13921 gcattaattg agggggagct taggctctcc cttttttaaa ggagacaata atggctcaaa
    13981 aaattatttt agattgtgat ccggggcatg acgatgcgat tgcgatgatg ctcgcttggg
    14041 ggaatccgaa tattgatttg ttggcagtga ctacggtggt aggtaatcaa accttagaaa
    14101 aagtatcgcg taatgcgttg gcggttgcgg aaattgctca tatttgcaac gttccttttg
    14161 ccaaaggttg tgccagaccg ctggtgcgtg aagtggaaaa tgccccggat attcacggtg
    14221 attcgggaat ggatgggcct gtactccctg aatctacccg acaatttgag aaaaaacacg
    14281 ccgctcaatt aattattgat ttgataatgt cgcacccgga gaaaagcatt accttagtgc
    14341 cgaccggtgg gcaataacca atattgctct agctgcccgc cttgagcccc gtattattga
    14401 aagagtgaaa gaagtggtgc tgatgggcgg aggttatcac accggcaact ggagtgcggt
    14461 ggcagaattt aatattaaaa ttgacccgga agctgctcat attgtgttta atgccggttg
    14521 gaaggtgacg atggtcggct tagacttaac tcaccaagca cttgcgaccc ccgatgtggt
    14581 tgaacgcttt aaggcattaa acagcaaatc ggggcagttt gtggtggaat tgctggcgtt
    14641 cttcgccaaa atgtataaac aggctcaagg ctttgatgct ccaccggttc acgatgcctg
    14701 tgcggtggcg tatgtgattg acccaagcct gattgaagtt cagcaagtgc cggtcaatat
    14761 tgagctaaca ggcacgcata cactgggtat gacggtggcg gatttccgct acccgccaaa
    14821 acagtgtaat acttgggtag caaaaaaatt agacaaatcc cgcttttggg atttggtaat
    14881 tgaatcggtg aaaaacctgc cgtaatctaa ataacccgct tgccggttaa gcgttggtat
    14941 attccgcctt gttgtctaac caacgcttaa ttaacgcctc tgcaagcggt tgattttcgc
    15001 taataatttg cttggcgtaa cgttgcacca gcggaatcat tttgcggtct cgcattaaat
    15061 ccgccacctt aaattctgcc attccggtct gttttgtgcc gagaatttcg cctgtgcctc
    15121 gaatctccaa atctttttcg gcaatgtaga aaccgtcttg gctatcacgc atcacttgta
    15181 accgcttgct ggaaattttc ccgagcggcg gtttgtacat taagacgcaa tgcgaggcgg
    15241 ttgcccctcg cccaacacgt ccacgcaact ggtggagttg agccagcccg agtcgttcgg
    15301 aattttcgat aatcattagg ctagcattcg gcacgtccac tcccacttca attacggtgg
    15361 tcgcaaccag caaatctaaa ttcgctgcct taaattccgc cataatcgct tgtttttcct
    15421 gtggtttcag ccgtccgtgt actaacccga tgcgtaaatc cggcaaggct cgctgtaaat
    15481 cttcggcaat cgctgccgcg gcttgagcct ctaacacttc gctttcatca atcagggtgc
    15541 agacccaata ggcttggcgg tgttcttgct tacagacttg gtacacccgt tggacgattt
    15601 ctgctcgccg atcttcagaa atcaccacag tcgtgattgg cgttctaccc ggtggcagtt
    15661 cgtcaatgat tgaggtgtcg aggtcagcat agaccgtcat tgccagcgtt ctcggaatgg
    15721 gggtcgccgt cataatgagc tgatgcggat agttattttc tttcgctcct ttttcccgca
    15781 aggtcagccg ttggtgtacg ccaaaacggt gttgttcatc aataatcacc aacgctaaat
    15841 ggtgaaattc cacattgtct tggaacaggg cgtgagtgcc gataatcatc tgcacatcac
    15901 cgtttttgat tgcctcaagt tgtgcggttc tcgccttgcc tttcacttta ccggcaagcc
    15961 agccaacctc aatcccaaag ggattaagcc agttggcaaa attattggcg tgctgttcgg
    16021 caagaatttc ggtcggtgcc attaatgcca cctgcttgcc gttatcaatc gctaatagtg
    16081 ctgccaaggc ggctactaag gttttacctg aaccaacatc gccttgtacc agtcgcatca
    16141 tcgggtgtgg tttggcaaga tcttgctcaa tatctgcggt tactcggctt tgtgcgtgag
    16201 taggcttaaa aggcaaactg tcgagaaaac gctgttttat atcggtttgg taagtaagtg
    16261 cctctgcata ttgctgtttt acccctaaac ggagttgctg catcgctaaa ttgtgtgcca
    16321 gcagttcttc aaaaatcagc cgtttttgag cagggtggtc acctttttcc aagacttcgg
    16381 cagaaatcgt cggcggtggg cggtgcaata actgcaacgc ttcttttagg ctgtatttgt
    16441 gcggattgta ttcatcaggc aacagctcgg cgactttcac tttctctaat aaagcgaggg
    16501 cttgctcggt taatttccgc agcgaggctt gttttaaccc ctcagtggtg gagtaaatcg
    16561 gggtcagggt ttcagccagt acaagcggtt gattatcccg aataatttga tattcagggt
    16621 ggtgaatttc cgccataaat cgcccacgct taatttcccc aaaggctttt acccgaacgc
    16681 cggtggcaag gctatttttc attccagcat tgaaattgaa gaatttaagc ataattttgc
    16741 tggtgctgtc ggagagtgta accgataaaa tcgggcgttt accaaactgg acttcggtaa
    16801 gttgtacata gccttcaatg gtggcaaagc tttccgggcg aacatcagca atcggggtaa
    16861 tacgggtgcg atcttcatac cgcattggca gatgaaacag taaatcctgc acattattaa
    16921 tgccgattcg acttaacttt tcggaaattg ccgctcctac gccggaaagg gcggttaatg
    16981 gcacgccgtc taataattgt tcactcatta tttatgcggt ttcaaatggg ttaaataaac
    17041 gcacatcaca acggataaaa tctttggtgt tgcgggtgac taaaatcaga ttgtggtatt
    17101 tggcggttgc cgcaatataa gcatcattta aatccatttt attgggaata tggtactctg
    17161 atgccaatag agcaatgtcg ttattcacca caaacgcttt tgtttgataa gcctttaata
    17221 cattattttc aaaccaatca tttaatcggt ctgattgttc tttgtctttg cgggctttca
    17281 gcaaaatacc tgttttgatt tcagataacg taatacagct gatattggtc tggctaggat
    17341 taacccctct cagccactgg cgaacattga catccatctt gtcatttctt aacttataaa
    17401 gctcggaaac tatattggta tcaaaaaggt agcgatacat tactcatctc caaaatcaac
    17461 aggtcttggt ttattgcttt tgcggatttc aaccaatgtt tgttcaaact cttgccaaaa
    17521 ttcatcgctc acatcctcat tttcggaaga ggcgaatagc tcttcaaagc ttggctcgct
    17581 aggctttttc tgctgataat ccatataact agacaccaca ttgacgattt tgccccattt
    17641 ggtaataaaa accggctctt tttctgccat ttttaacact ttgctggcat tttgattaaa
    17701 ttctctggaa gtaatggtta ttgccatatc gctctccaaa atgtagtaaa aagatgagtg
    17761 tattttatta aatgtagtaa tatctttcaa ttaattcgct atttggcaac agatattttg
    17821 caaaaaatct tgaaaatctg accacttgcc ccatctattc cctgtttttt aatgaataaa
    17881 ggaatacaca atggcaaata atcaagaaac ccgtggcttc cagtcggaag tgaaacagtt
    17941 attgcaactg atgatccact cgctttactc caacaaagaa attttcctgc gtgagcttat
    18001 ttccaacgcc tctgacgccg ccgataaatt gcggtttaaa gccctttccg agccggcttt
    18061 gtatgaaggt gatggcgaac tgcgtgtgcg tgtctctgtt gatgaaacac tcggtacgat
    18121 tacgattgcc gataacggta tcggtatgac ccgtgagcag gtgatcgacc atctcggtac
    18181 gattgcaaaa tctggtacca aagaattttt gaacgcactc ggcactgatc aagccaaaga
    18241 cagccagctt atcgggcagt tcggcgtggg cttttactct tctttcatcg tggcggataa
    18301 agtgacagtc aaaacccgtg ccgccggagt gcctgccgag caaggcgtga tttgggaatc
    18361 tgccggtgag ggcgattaca ccgttgccga tctggagaaa aaagagcgtg gcacggaaat
    18421 cattcttcac ttgcgtgagg acgaaaaaga gtttttaaac gaatggcgtt tgcgtgagat
    18481 tatcggcaaa tactccgacc atatcggcct ggcggtggaa attcagacca atgaatacga
    18541 tgacgagggc aaagcaagcg gtcaaaaatg ggaaaaaatt aacaaagctc aagcgctttg
    18601 gacacgctca aaaaatgaga ttagtgacga ggagtacacc gaattttaca aacacctcag
    18661 ccatgatttt gccgacccgc tgatttggtc gcacaataaa gtcgaaggta agcaagaata
    18721 caccagcttg ctgtatgtgc cgagcaaagc cccgtgggat ctgttccaac gcgagcaaaa
    18781 acacggcttg aaactctacg ttcagcgtgt atttattatg gacgatgcgg aagtctttat
    18841 gccgaactac ttgcgtttta tgcgtggctt gctcgacacc aacgacctgc cgctcaacgt
    18901 cagccgtgaa attctgcaag agaataaagt tacccaatcg ctccgttctg ccttaaccaa
    18961 gcgtgcgtta caactgctgg aaaaattggc gaaagacgat gccgaaaaat atgcccaatt
    19021 ctggcaagcg ttcggcgtgg tgcttaaaga gggcgtgggc gaagactttg ccaacaaaca
    19081 acaggttgca ggcttactcc gttttgcctc cacccagcgt gatgacagcg aacaagcggt
    19141 cagttttgcc gattatattg caagaatgaa agaggggcag aaagcgatct acttcttaac
    19201 cgcagacagc taccaagcgg ctaaaaacag cccgcactta gagctgttcc acaaaaaagg
    19261 cattgaggtg ctactgcttt ctgaccgcat tgatgaatgg ttggttagcc acctcaccga
    19321 gtttgacggc aaaccgctac aaagcattac caagtcggac ttagacttag gcgagcttgc
    19381 cgacaagcag gaagaagaga gccaaaaagc ccaacaggcg gagtttggtt cgttcttaga
    19441 acgggcgaaa ggctactttg gtgaacgggt caaaaacgtg gtgctgactc accgcttaac
    19501 cgacacaccg gcagtggttt ccactgacag cgatgaaatg accacccaaa tggcaaaact
    19561 gtttgcagca atggggcaac aagcaccaga agtgaaatat acttttgagc tgaacccaga
    19621 tcacccaatg gtgaaaaaag tagctgatct tgccgatgaa gccgagttcg ccgattggat
    19681 tgaactgctg tttgaacaag ctctgcttgc tgaacgaggc acgttggaaa acccgacagc
    19741 ctttattaaa cgggtaaata aattgttggg ctagccatta ctaaaaacgg aaatctaggt
    19801 ttccgttttt ccatattcaa tatataatgg aacaaaaatt aaacaatgta ttcgggggaa
    19861 taatgtttaa agaaaaagat tatgatgaat atttagaggc taaagtaaaa aaaggtcaga
    19921 tttttactct tgaacaagca aatgccgaat ggcaagagat tattgagcaa attgaacgag
    19981 aaaattaagc atacacagtt taagaaaata cccttagtta aaacaaaata accgcttaca
    20041 agcggttatt tttttatagg attttgcaaa atttcctgaa aatttaaccg ctttgtttta
    20101 aaataagcag attttttcag gtttcaaagt ttaaaaagaa taggaatagc aatgcgtaca
    20161 agtcaatatt tattttcaac ccttaaagaa atgccgaatg atgcacaagt agttagccat
    20221 caattaatgt tgcgtgccgg aatgattcgc ccgatggcgt caggtttata caactggttg
    20281 ccgaccggga tcaaagtgtt gaaaaaagtg gaaaatatta ttcgtgaaga gatgaacaaa
    20341 ggcggggcta tcgaggtatt aatgccggtg gttcagccgg cggaattatg ggtggaatcc
    20401 ggtcgttgga atgattacgg cccggaatta ttacgtttta aagatcgtgg cgagcgtgat
    20461 ttcgtgcttg gcccgactca cgaagaagtg attaccgact tggttcgccg tgaagtttct
    20521 tcgtacaaac aacttccgct gaatttatac caaattcaaa cgaaattccg tgatgaagtc
    20581 cgccctcgtt tcggggtaat gcgttcgcgt gaatttgtga tgaaagatgc ctattctttc
    20641 cacaccacac aagagagcct gcaagaaacc tatgatgtga tgtatcaggt ttacagcaat
    20701 attttcaccc gtttgggctt agatttccgt gcggtgcagg cagataccgg ctctatcggc
    20761 ggttcagcct ctcacgagtt ccaagtgtta gcctcaagcg gtgaagatga tgtggtattt
    20821 tcaaccgaat cagattttgc tgccaatatt gaattagccg aagcggttgc ggtgggtgaa
    20881 cgccaagcac caacggcaga aatgcaatta gtggatacgc caaatgcgaa aaccatcaat
    20941 gaattagtag aaaatcacgg tttagccatt gaaaaaacgg tgaaaacctt agtggtgaaa
    21001 ggggcaactg aagagcaacc gttaattgcg ttagtgattc gtggcgacca cgagttaaac
    21061 gaaattaaag ctcaaaaaca cccgttggtg gctgatccgc ttgagtttgc cgatgaagcg
    21121 gaaattaaag ccaaaatcgg tgccggtgtt ggctcgttag gtgtggtgaa tatgccgatt
    21181 ccggtgatta ttgaccgctc agtggcgttg atgtcagatt ttggctgcgg tgcgaatatt
    21241 gatggcaaac actactttaa cgtgaactgg gagcgtgatg ttgctgtgcc ggaaattgca
    21301 gatttacgca atgtggtgga aggcgaccca agcccggacg gtaaaggcac acttcaaatc
    21361 aaacgaggta ttgaagtagg gcatattttc caattaggca aaaaatactc agaagcaatg
    21421 aaagccactg tgcaaggtga agacggtaaa ccgctagtga tgacaatggg ttgttacggt
    21481 atcggcgtta cccgtgtggt ggcagctgcg attgaacaac attatgatga tcgtggtatt
    21541 atctggcctt gtgatgaaat ggcgccattt acggtggcga ttgtgccgat gaatatgcac
    21601 aaatcggaaa aagtgcaggc attcgctgaa gagttatacg ctaacttaaa agctcaaggc
    21661 gttgaggtga tttttgatga tcgtaaagaa cgcccgggcg tgatgttcgc ggatatggag
    21721 cttatcggtg tgccgcatat ggtggttatt ggtgagaaaa acctcgagaa cggcgaaatc
    21781 gaatacaaaa accgccgcag cggtgaaaaa cagatgatcg ccaaagagag cttacttgcg
    21841 ttcttaaaag cgaatgtaaa ggcttaatta taaataacaa aattgggcgt ataaaatacg
    21901 ccctttaata taaagcagcg agtatttaac taaagtataa aatactctat tatttttaga
    21961 atataggaaa tagaatgcgt g
//
LOCUS       DANLTI010000031        21404 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.031, whole genome shotgun sequence.
ACCESSION   DANLTI010000031 DANLTI010000000
VERSION     DANLTI010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21404
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.031"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            2..508
                     /locus_tag="PXB09_000912"
     CDS             2..508
                     /locus_tag="PXB09_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDL5233048.1"
                     /translation="MAMSNIGLDKEIAKKLADELNGLLATYQVFYTNVRGYHWNVRGV
                     NFFELHAKFEEIYDDLVTKVDEIAERILTLGHTPQNAFSQYLTKSQIQEHIGVSAAQE
                     CLRGTLNGFKTLLGQQREILALANDANDEGTASQMSDYIKEQEKLVWMFTAACAECSD
                     YAQGCSCN"
     gene            567..1280
                     /locus_tag="PXB09_000913"
     CDS             567..1280
                     /locus_tag="PXB09_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDL5233049.1"
                     /translation="MAMSQGFQFKQFFIRHDRCAMKVNTDGILLGAIAHIKDCQNILD
                     LGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQGDVMQQ
                     AFEQKFDLIVSNPPYFADSLAARTTERDLARSISHYSHLNWLAKAKPWLAENGKITLI
                     LPIAAAEKLVDQSEQIGLYCVEQWLIFTKSGKLAKRSIVSFSLNKQKREHKELIIYDL
                     DNCYTTEFKRLTQDFYLNF"
     gene            complement(1391..2395)
                     /locus_tag="PXB09_000914"
     CDS             complement(1391..2395)
                     /locus_tag="PXB09_000914"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005651072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDL5233050.1"
                     /translation="MAFNLKNRHLLSLVNHTEREIRFLLDLARDLKRAKYAGTEQQKL
                     KGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYIDPNSSQIGHKESMKDTARVLGRMY
                     DAIQYRGFKQSVVQELADYAGVPVFNGLTDEFHPTQMLADVLTMIENCEKPLSQISYV
                     YIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEDAFVKMCEKFAAESGARMTVTED
                     IETAIKGVDFVHTDVWVSMGEPLESWTERIDLLMPYRVTPELMQATDNPKVKFMHCLP
                     AFHNSETKVGKEIAEKYPALANGIEVTEEVFESPMNVAFEQAENRMHTIKAVMVASLA
                     "
     gene            complement(2483..3322)
                     /locus_tag="PXB09_000915"
     CDS             complement(2483..3322)
                     /locus_tag="PXB09_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDL5233051.1"
                     /translation="MQSYPYLLVNVFATSHFGGNPLAVFYEADGLTDLQMQLIARQFN
                     LSEVVFIQSSTDSQAVKKLKIFTPDYEMPFAGHPTVGAAFVLHSAFDFPTTYRLQTNA
                     GLVAIQHQHNVTTFALTNGVNLENTPLSRAECASILGLNVADIASEPCYVNTGVEQLL
                     VELASQQAVEKCKINANLAEKAFLKDSVYVWCREGNEAKVRLFFQSQGSIVEDPGTGS
                     AAANLGGWHIAQGKIPIQLQISQGDEIQRPNRLLLKVDQNGKIFVGGEVILVGKGEFY
                     LPE"
     gene            3512..4846
                     /locus_tag="PXB09_000916"
     CDS             3512..4846
                     /locus_tag="PXB09_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5233052.1"
                     /translation="MLYAEFLLLLAFLYAGSRYGGIGLGVVSGIGLFVEVFFLGMPLS
                     APPISVMLVILAVVTCASILEAAGGLKFMLQVAERILRSNPKRITFLGPLVTYLMTLM
                     LGTGHSVYSIMPIIGDIALKNKIRPERPMAAASVASQLGITGSPLSAAVAYYLTEIVK
                     LPGFEGVTLLNVVGVTITATFCGVIAMSLYSLRRGKELEDDPEYQRRMQDPELRKQIE
                     QTSATSLDEKLPASAKNSVYLFLAAIATIVIIAMIPAIKPTVAATGKVAGMDQIIQIV
                     MLTFGGLILILTKTDPKKVPNGIVFKSGMVATIAIFGIAWMSDTYFTHAMPAFKEGVT
                     EMVRAQPWTFAFALFAVSVVVNSQAVTAKMLLPVGIAMGLPAPLLVGLMPATYAYFFI
                     PNYPSDIATVNFDVTGTTKIGKYYFNHSFMAPGLVGVITACIVGIAVANVLI"
     gene            complement(4926..5336)
                     /locus_tag="PXB09_000917"
     CDS             complement(4926..5336)
                     /locus_tag="PXB09_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5233053.1"
                     /translation="MNSTLTNLQPLAFLITRVVAGYMFLLHGTAKFFEFPMSMTNGNG
                     SVPLASIYGVGGILEIVGGIFFILGLFTRQTAFILSGMMAYAFFIAHGAQGNVLLPLL
                     NGGELAGVYSVLFLTYIFIGGGKYSLDAKLFNKA"
     gene            complement(5459..6136)
                     /locus_tag="PXB09_000918"
     CDS             complement(5459..6136)
                     /locus_tag="PXB09_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5233054.1"
                     /translation="MNLFGFRCFHCNHPLAIGVQGICSHCQKLLKPTPYCRHCGMSAV
                     EFRNACGYCLKNEPKWHKLVRVNEYRAPLSHWVHQFKFQQQYWWDQALARQLLLAIKQ
                     AQREQVLSLPEVIMPVPLFWHRHWKRGFNQSELLCDWLSKWLQIPLDTQSLQRVRATV
                     SQRELTAAERRKNLRGAFFYQPLKAYKRVAIVDDVLTTGSTLNVICAELLKAGVVEIQ
                     VWVLARA"
     gene            6254..7066
                     /locus_tag="PXB09_000919"
     CDS             6254..7066
                     /locus_tag="PXB09_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5233055.1"
                     /translation="MKSLQKPIKIVFFDIDDTLYVKHKAYIPKSITEQVLPRLKAKGI
                     IPAIATGRNHGCFPEALKPYLNPEIGFELFVTINGQYNFYKDQIISDYSLSREQIERI
                     IEKANALGILYAFITPMTIAVSETNPIVHEAVLPITPNYLIDPHYYEKEKIVQMLLFY
                     TEEQKQAVENSGIFANDLKEARWHPNAVDILRKENSKARGIQDVLATLNIEIESAMAF
                     GDGINDLEMLPTVGVGVAMGNGVPELKAVADFITKPLEEDGILYALETLEVI"
     gene            complement(7114..7383)
                     /locus_tag="PXB09_000920"
     CDS             complement(7114..7383)
                     /locus_tag="PXB09_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5233056.1"
                     /translation="MGLLYLLLLNTLIGYGSYGEALNHWDTSKVSIVTTMLPIFTMIF
                     SNLSYYFYPHIFAKPDMNWISYLGALVVVSGAILAIAGDKLFRRN"
     gene            complement(7356..8033)
                     /locus_tag="PXB09_000921"
     CDS             complement(7356..8033)
                     /locus_tag="PXB09_000921"
                     /inference="COORDINATES: protein motif:HMM:NF013088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5233057.1"
                     /translation="MKQRPLLGFSLALTAAMTWGTLPIAAQQVLKVIDAQTLVWVRFV
                     VASVGLLLILGFAKRLPKLTACSKKELGLILLGVCGLSANFFLFAEALHYVSPTINQV
                     LWQLAPFSMILLGVLLFKEKFGLFQKIGFVLLIAGLVAFFNDKFAEILQLNTYALGVL
                     LSAGASLIWVLYGVAQKLLLAKFNSQQVLFIIYIGCSLLMLPFASPAQLGNLEDGFLW
                     GCFIYCC"
     gene            complement(8135..8392)
                     /gene="rpmA"
                     /locus_tag="PXB09_000922"
     CDS             complement(8135..8392)
                     /gene="rpmA"
                     /locus_tag="PXB09_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDL5233058.1"
                     /translation="MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSIIAD"
     gene            complement(8413..8724)
                     /gene="rplU"
                     /locus_tag="PXB09_000923"
     CDS             complement(8413..8724)
                     /gene="rplU"
                     /locus_tag="PXB09_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDL5233059.1"
                     /translation="MYAVFQSGGKQHRVSEGQVVRLEKLELATGEKVEFDSVLMVVNG
                     EDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQ
                     A"
     gene            9002..10000
                     /gene="ispB"
                     /locus_tag="PXB09_000924"
     CDS             9002..10000
                     /gene="ispB"
                     /locus_tag="PXB09_000924"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDL5233060.1"
                     /translation="MAVQLFSLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYI
                     IAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRP
                     TANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVND
                     PNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDI
                     LDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGKTTQAELIRNAIENGGELEQ
                     IPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYKQALVSLAYLSVDRSY"
     gene            10103..10849
                     /locus_tag="PXB09_000925"
     CDS             10103..10849
                     /locus_tag="PXB09_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDL5233061.1"
                     /translation="MTEQNQRPQEHIESVRARRRAQNQKKGPNAPFVREKLTLPNGHN
                     KLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAEKWGIP
                     FIDLDDDYENDRKEWFKKAKGMEWEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSC
                     LGISRWKDMNQINDCGHRAAAKFDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCG
                     CVYSLRDSNKWRLETGRQRIEIGKLYYSPD"
     gene            11266..12201
                     /gene="fabD"
                     /locus_tag="PXB09_000926"
     CDS             11266..12201
                     /gene="fabD"
                     /locus_tag="PXB09_000926"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDL5233062.1"
                     /translation="MSKFAMVFPGQGSQAVGMLADLAPQYPIVEETFKQASDVLGYDL
                     WDLVQNGTAEELGQTHRTQPALLASSVALFRIWQQKFPEQKPAVMAGHSLGEYSALVC
                     AGVLDFQDAIKLVELRGRAMQEAVPAGSGAMFAIIGLDNESIIKACEQAASETGEIVS
                     AVNFNSPGQVVIAGTKAAAEKAGELCKAAGAKRALPLAVSVPSHCALMKPAAEKLAEA
                     LQNIELNQPLVPVINNVDVAVETDADTIRNALVRQLYSPVRWTETVEKMAQDGITTLY
                     EIGPNKVLTGLAGRIVKELSAKAVNDVASFEAVEA"
     gene            12218..12682
                     /locus_tag="PXB09_000927"
     CDS             12218..12682
                     /locus_tag="PXB09_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233063.1"
                     /translation="MSKETLFMLISALIALVILPLAYTVGIAKETLGGNMGMLSIAAG
                     CSFLAYFLSLNPKIRHAFIGGSAITAAAIQAWVLYGVLLSENDPKSAVVLFQIYLFSS
                     LGPLFFSAIWAFTRPRWIYPKQGSAVKYALFGGLTTVINYLITLFIFYILTL"
     gene            12703..13425
                     /gene="fabG"
                     /locus_tag="PXB09_000928"
     CDS             12703..13425
                     /gene="fabG"
                     /locus_tag="PXB09_000928"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5233064.1"
                     /translation="MSKIALVTGATRGIGKAIAEELVAKGYIVVGTATSEKGAESISA
                     YLGENGKGLVLNVADAESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFD
                     IIQTNLTSVYRLSKAVLRPMMKKGGRIITIGSVVGSMGNPGQTNYCAAKAGLVGFSKS
                     LAKEVASRGITVNVVAPGFIATDMTDELTEDQKNAILSQIPAGELGSPQDIAKAVAFL
                     ASDDARYINGETIHVNGGLYMS"
     gene            13544..14842
                     /gene="brnQ"
                     /locus_tag="PXB09_000929"
     CDS             13544..14842
                     /gene="brnQ"
                     /locus_tag="PXB09_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDL5233065.1"
                     /translation="MTRNTLVVGFLLFAIFFGAGNLIFPPKLGYESSTEFFSAISGFV
                     LTGVGLPLLGIIVSAFYNGGYKSALDKIHPWFSLAFLTSIYLAIGPFFAGPRTAATAY
                     EMAIMPFLGDSSQVSMLIFTLIYFAFTLWLALNPNKMVDRIGAILTPILLITIIGLVI
                     RAGFILDTDPQITTPNTNEQSYFFKGMVDGYLTMDALASLAYSVIVLNAIRGKGVSQA
                     ALQRQTVSAGLVAAVALAVIYISLGWIGNNMPISANTLSMLSERKLDLGTYILNTVTT
                     QAFGELGRSVLGVIVSLACLTTAVGLAVSVSEYFNEIFPKISYKVYAILFTVISFTVA
                     NQGLKEVISKSIPVLLVLYPIAMTVILMLLINLVIKLPLSAQRLSLLLVTIVAIASVA
                     GVGFTENLPLKSYSMEWLPFAIIGAIIGAIIHPLTGRKHK"
     gene            14888..15712
                     /gene="mutM"
                     /locus_tag="PXB09_000930"
     CDS             14888..15712
                     /gene="mutM"
                     /locus_tag="PXB09_000930"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDL5233066.1"
                     /translation="MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQM
                     AGAKITAVERRAKYLIIRTDKGDILVHLGMSGSLGILQERQQKEIGKHDHVDLITQNG
                     TILRYNDPRKFGCWLWAEKAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFI
                     MTNEVVVGVGNIYACESLFMAGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTT
                     LKDFIQPDGKPGYFAQVLQVYGRKGETCNDCGKPIETKVIGQRNTYFCPKCQRLPK"
     gene            complement(15795..16229)
                     /gene="dtd"
                     /locus_tag="PXB09_000931"
     CDS             complement(15795..16229)
                     /gene="dtd"
                     /locus_tag="PXB09_000931"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDL5233067.1"
                     /translation="MIGLIQRVKFAKVEVEGQVVGEIASGLLVLLGVEKDDDEAKADK
                     LLEKVLNYRVFSDSEGKMNLNVQQAGGSLLVVSQFTLAADTNKGLRPSFSKGASPVDA
                     ERLYAYFHQQAATKIHTQTGQFAADMQVSLQNDGPVTFWLQV"
     gene            complement(16204..17049)
                     /locus_tag="PXB09_000932"
     CDS             complement(16204..17049)
                     /locus_tag="PXB09_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDL5233068.1"
                     /translation="MLNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLF
                     SIFTFFPIFHEANEQLKAFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVT
                     IMLIKSIDEALNTIWHDNRQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFN
                     GNGALSLGQHLLELMPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKA
                     FIWYITAFPSYQAIYGALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDKGSINDR
                     LNSAG"
     gene            complement(17051..18289)
                     /gene="proA"
                     /locus_tag="PXB09_000933"
     CDS             complement(17051..18289)
                     /gene="proA"
                     /locus_tag="PXB09_000933"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDL5233069.1"
                     /translation="MQMIELAQQAKQASFELAQFGNLQKNQALLTIADSLEQRAEEIL
                     YANAKDIEFAQAQGISLAIIDRLLLNEDRLKDIANDVRNVAKLADPVGQVMDGGVLDS
                     GLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVDVV
                     QDALEKAGLPKLAVQAVTDPDRALLLELLKLDRYIDMVIPRGGAGLHQFCKENSTIPV
                     IVGGIGVCHLFVEKTADQEKSLEVIANAKTQRPSTCNTLETLLVEKAIAVEFLPKLVA
                     KMQQLGVTIHSNDLQKIEGIEPLDQAKLSQEWLSLDLNVVVVNDLQQAVEHIRHYGSQ
                     HSEGILTSDYQLARQFVQQVDAAAVYINASTRFTDGGEFGLGAEVAVSTQKLHARGPM
                     GLEALTTYKWVCEGDYLVRG"
     gene            18573..20456
                     /gene="mutL"
                     /locus_tag="PXB09_000934"
     CDS             18573..20456
                     /gene="mutL"
                     /locus_tag="PXB09_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDL5233070.1"
                     /translation="MINTTPKQLIHILPPQLANQIAAGEVVERPASVVKELVENSLDA
                     GANTIQIDIEKGGSQLIRIRDNGCGISKQDLPLALARHATSKISSLEDLEAILSLGFR
                     GEALASISSVSRLTLTSRTAEQTEAWQAYAQGREMAVEIQPASHPIGTTIEVANLFFN
                     TPARRKFLRTDKTEFAHIDEVVRRIALAKPNISFSLSHNGKIVRQYRKVQDNSVEQQQ
                     KRVAAICGDEFIQHSTYIDRQHGDLHLHGWVGSPALARLQNDLCYSYVNGRMMRDKTI
                     NHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDVNVHPAKHEVRFHQGRLVHDFILQGV
                     LNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQNIFVSQTAPQAAEFTQKNASRSS
                     YTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQSTLVEPKTEPQTEHKTEAVSQ
                     KITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLATLAELKLKLQLEKGQSQALL
                     IPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLTVLSVPQAVREQNLQQLL
                     FALFNQTQAVNLAEFFAKKCEKPTACTLSDVIALLSEIELYANGKKELEGIRKEVDFS
                     KFL"
     gene            complement(20475..20744)
                     /locus_tag="PXB09_000935"
     CDS             complement(20475..20744)
                     /locus_tag="PXB09_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5233071.1"
                     /translation="MREIEYSNAFKRDYKKCAVESLSSSLIEALYFLINDKPLPEKYC
                     DHALTGEWKGFRDCHIQPDLVLIYRKVEDDKLELLRIGSHSHLFG"
     gene            complement(20731..20997)
                     /locus_tag="PXB09_000936"
     CDS             complement(20731..20997)
                     /locus_tag="PXB09_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5233072.1"
                     /translation="MANSALVSVRISPEIKEQASEVLAGIGLTVSDVMRMTLAKIATE
                     KRFQFDYQPNFETAEVLRAVKNGEEKLHSANSIADLMEQLNARD"
BASE COUNT         6388 a         4673 c         4358 g         5985 t
ORIGIN      
        1 tatggcaatg tcaaatatcg gtttagataa agaaatcgca aaaaaattag cagatgagtt
       61 aaatggttta ttagctactt accaagtgtt ttacactaat gtacgtggct accattggaa
      121 tgtacgtggt gtgaacttct ttgaattaca tgcaaaattt gaagaaatct acgatgattt
      181 agtgacaaaa gtagatgaaa ttgcagaacg tattttaacc ttaggtcaca cacctcaaaa
      241 tgcgttcagc caatatttaa ccaagtcaca aattcaagaa catattggtg tttcagctgc
      301 acaagaatgt ttacgtggta ctttaaatgg tttcaaaaca ttactgggac aacaacgtga
      361 aattcttgct ctagcaaatg atgcaaacga tgaaggtact gcttctcaaa tgagtgatta
      421 catcaaagaa caagaaaaat tagtatggat gttcactgca gcttgtgctg aatgttcaga
      481 ctacgcacaa ggttgttctt gtaactaagt tgcaataata taattaaccc ccgataatga
      541 aagattatcg ggggttactt tttcagatag ctatgtcgca aggatttcaa tttaaacagt
      601 tttttattcg gcacgacaga tgtgcaatga aagtcaatac agatggtatt ctattgggag
      661 cgattgctca cataaaagat tgtcagaata ttttagatct gggtataggt tctggtttag
      721 tagcacttat gcttgctcag agaacagatg attgttgtca cattactgcg ttggaacttg
      781 aaccaaatgc ctaccaacaa gcggtcgaaa atgcccaaaa ttctgcatgg gcaaatcgga
      841 tttccgtttt gcaaggtgat gtgatgcagc aggcatttga acagaaattt gacttgattg
      901 ttagtaaccc accttatttt gcagattcac ttgcagctcg aaccacagag agagatttag
      961 ctcgctcaat tagccattac agccacttga attggctggc aaaagcaaaa ccatggttag
     1021 cagagaacgg gaaaattaca ctgattttac ctatagcagc tgcagaaaaa ttagttgacc
     1081 aaagtgaaca aattggattg tattgtgttg aacaatggtt aatttttacc aagagcggca
     1141 aattggctaa acgcagtata gtgagtttta gtttaaacaa gcaaaagcgt gaacataaag
     1201 agctgatcat ctatgatcta gataattgtt acactactga gtttaaaaga cttacccaag
     1261 atttttattt gaatttttaa tttactcccc gggttagtgt tttccacaaa tcttcttcag
     1321 ctacgatgat ctagccttaa gctaaaaagc agattaccac ccaagataat ccgcttttta
     1381 gacttagcta ttatgccaaa cttgctacca ttaccgcttt aatagtgtgc attcgatttt
     1441 ctgcttgctc gaatgccaca ttcattggcg attcaaacac ctcttcggtt acttcaatgc
     1501 cgtttgccag tgccggatat ttttcggcga tctctttacc gactttagtt tcactgttgt
     1561 ggaacgccgg taagcagtgc ataaatttca ctttcgggtt gtcggttgct tgcattaatt
     1621 caggcgttac tcggtaaggc attaataaat ctatacgttc agtccagctc tctagcggtt
     1681 cacccattga aacccaaaca tcagtatgca caaaatcgac acctttaatt gcagtctcaa
     1741 tatcttcggt taccgtcatt cttgcccccg attcagctgc aaatttttca cacattttca
     1801 cgaatgcatc ttccggtaat aaggctttcg gggcacaaat tcgcacgtcc atccccaatt
     1861 tcgccccaat caacaggagt gaattaccca tattattgcg agcatcgccg atatagacat
     1921 aactgatttg gctaagcggt ttttcgcaat tttcgatcat cgttagcacg tcagccaaca
     1981 tttgggttgg gtggaattca tcggttaagc cgttaaacac cggcacgccg gcataatcgg
     2041 caagctcttg tactaccgat tgtttaaagc cgcgatattg aatcgcatca tacattctgc
     2101 ctagcactcg ggcggtatct ttcattgatt ctttatgccc gatttgcgag gagttcgggt
     2161 caatataggt aacgtgagcc ccttgatcgt aagctgctac ttcaaaggca caacgagtac
     2221 gggtcgaggt tttctcaaaa attaaggcaa tatttttgcc ctttaatttt tgctgctcag
     2281 tgccggcata tttcgcccgt tttaaatctc ttgctaaatc caacaaaaag cgaatttcac
     2341 gctcagtgtg gtttactaaa ctgagtaaat gtctgttttt taagttaaat gccattttgt
     2401 ttctccctgt aaacattaaa atttatttta tgcaaaataa ttgcataaaa attcacttat
     2461 agcaaacaga atttgcttac cctcattcgg gtaaataaaa ctcgcctttg ccgactaaaa
     2521 taacctctcc gccaacaaaa atcttcccgt tttgatcgac ttttaataac aggcgattcg
     2581 gccgttgaat ttcatcacct tgtgagatct gaagctggat tggtattttg ccttgtgcaa
     2641 tgtgccaacc gcctaaattt gccgctgccg aaccggtgcc ggggtcttcg acaatcgaac
     2701 cttgcgattg aaaaaacagt cgcactttcg cctcatttcc ctcacgacac caaacatata
     2761 cactgtcttt caaaaatgct ttttcagcca gatttgcatt tattttgcac ttttcgaccg
     2821 cttgttgaga agctaactca accaataact gctccacgcc ggtgtttaca taacaaggct
     2881 cggacgcaat atccgcaaca ttcagcccca atattgaggc acattctgca cggcttagcg
     2941 gtgtgttttc caggttcaca ccattggtta aagcaaaagt agtcacatta tgttgatgtt
     3001 gaatcgctac caatccggca ttagtttgca agcgataggt tgttggaaaa tcaaaggcgg
     3061 aatgcaacac aaaagccgct ccaacagttg ggtggccggc gaacggcatt tcataatcag
     3121 gcgtaaaaat tttgagtttt ttgaccgctt gtgaatcggt ggaagattga ataaatacca
     3181 cttcagaaag gttaaattgg cgagcaataa gttgcatttg taagtcggtt aatccgtccg
     3241 cttcataaaa tactgcaagc gggttgccgc caaaatggct tgttgcaaac acattcacca
     3301 gcaaataagg atagctctgc atttatcact ccttacataa acttaaagcc acattgggcg
     3361 aaaattctac cattttggtg gcgaatcgta aaattggaaa atttatcggt atccctcttt
     3421 agagttaact atttttgatt tatctcaaag ttttaaaaaa aagattaggt catacttctt
     3481 tctagtgatt attttttaat ttgaggttct tatgctttat gcagaatttt tacttttatt
     3541 agccttttta tatgcaggta gccgttacgg tggcatcggt ttaggtgtgg tttccggcat
     3601 cggcttattt gttgaagtgt tcttcttagg aatgccgctt tccgctccgc caattagcgt
     3661 gatgctcgtg attttggctg tagttacttg tgcctccatt ctagaagccg ctggcggttt
     3721 gaaatttatg ttgcaagttg ccgaacgcat tttgcgtagc aacccaaaac gtattacctt
     3781 tcttggccca cttgtcactt atctgatgac cttaatgctc ggcacagggc attcggttta
     3841 ctctattatg ccgattatcg gtgatattgc cttaaaaaat aaaattcgcc cggaacgccc
     3901 gatggcagca gcctctgttg cttcacaatt aggtattacc ggtagcccac tttctgctgc
     3961 agttgcctat tacttaaccg aaatcgttaa attaccgggc tttgaagggg tgactttatt
     4021 gaatgtagtc ggcgtaacca tcaccgcaac cttctgtggt gtgattgcga tgtcattata
     4081 tagcttacgt cgtggtaaag agttggaaga cgatcctgag tatcaacgcc gtatgcaaga
     4141 ccctgagcta cgcaaacaaa tcgagcaaac gagtgcaacg tctttagacg aaaaactacc
     4201 ggcaagtgcg aaaaactcgg tttatctgtt cctagccgct attgcaacca ttgtgattat
     4261 tgcaatgatt ccggctatta aaccaacggt tgctgctaca ggaaaagttg ccggtatgga
     4321 tcaaatcatt caaatcgtga tgctaacttt cgggggttta atcttaattt taactaaaac
     4381 cgacccgaaa aaagtaccaa acggcatcgt tttcaaatcc ggtatggtag caaccattgc
     4441 gattttcggg attgcttgga tgagtgatac ttacttcacc catgcaatgc cagcgttcaa
     4501 agaaggggta acagaaatgg ttcgagccca accttggaca ttcgccttcg ccttgtttgc
     4561 ggtatctgta gtagtaaaca gccaagccgt aaccgcaaaa atgttattac cggtaggcat
     4621 tgcaatgggc ttgcctgctc cattattagt tggtttaatg ccggcaactt atgcttactt
     4681 ctttattccg aattatccgt ctgatatcgc aaccgttaac tttgacgtaa ccggtacaac
     4741 taaaatcggt aaatattact tcaaccacag ctttatggct ccgggtttag ttggcgtaat
     4801 tactgcctgt attgtcggta tcgccgttgc aaatgtgcta atttaatttt aacaaaaaaa
     4861 caagcggtca gattaagtaa attttttacc aaatctgacc gcttgattat ttactgcaaa
     4921 accaattagg ctttgttaaa gagttttgca tctaacgagt attttccgcc accgataaaa
     4981 atataggtta agaataatac cgaatacacg cctgctaatt caccgccgtt taataaaggt
     5041 aatagcacat tgccttgagc tccgtgagca ataaagaacg cgtatgccat catacctgaa
     5101 aggataaacg ctgtttggcg ggtaaataga cctaaaataa agaaaattcc gcccacaatt
     5161 tccaaaatac cgcctacacc ataaatggag gcaaggggta cactgccgtt tccgttggtc
     5221 atcgacattg gaaattcaaa aaatttcgct gtgccgtgta ataaaaacat ataaccggca
     5281 acaacacggg tgattaaaaa cgctaaaggt tgtaaatttg ttaaagtaga gttcatttgc
     5341 tttccttaaa ataaattgtg atataaaggt caattgattg aggcaggcat tctattttaa
     5401 aaacctatac ttcacaatcc agccgtcatg aaatagatta tttaccatta ataaacaatt
     5461 aggctctcgc taacacccaa acctgaattt ctactactcc agctttgagt aactcggcac
     5521 aaattacatt taaggtggaa cctgtggtga gcacatcatc aacaatcgcc actcgtttat
     5581 aggcttttaa cggttgatag aaaaatgccc cacgcagatt tttccgccgt tcagcagcgg
     5641 tcaattctct ttgtgagacg gttgctctca cacgttgtaa actctgggta tccagcggaa
     5701 tctgtaacca cttcgataac caatcacaca ataattcgct ttgattaaac cctcttttcc
     5761 aatgtctgtg ccaaaaaagt ggtacaggca taatcacttc aggcaagctc agaacctgtt
     5821 ccctttgagc ttgtttgatt gccagcagca attgtcgggc aagggcttga tcccaccaat
     5881 attgctgctg gaacttaaat tgatgtaccc aatgtgaaag tggcgctcgg tattcattta
     5941 ccctcactaa tttatgccac ttcggttcat ttttcaaaca atagccacaa gcgtttcgaa
     6001 actccaccgc actcattcca caatgacgac aataaggggt tggttttagc aatttttggc
     6061 aatggctgca aatgccttgc acgccaatag cgagtggatg attacaatga aagcaacgga
     6121 agccgaataa attcacattt cctcctttta tttgcagatt atcaaattta gccttatttt
     6181 ttccggctat ttttgtgaca tcgctcgaaa aaagagtaaa atctcattat cagtaaataa
     6241 aaaggaaacc gagatgaaat ccctccaaaa accgatcaaa attgtctttt tcgatattga
     6301 tgacaccctc tatgtaaaac ataaagccta tattccaaaa tcaattaccg agcaggtatt
     6361 acctcgttta aaagccaaag gcattattcc ggccattgcc accggcagaa atcacggctg
     6421 ttttcctgaa gctctcaaac cttatttaaa ccctgaaatc ggttttgagc tgtttgttac
     6481 cattaacggg caatataatt tctataaaga tcaaataatt agtgattatt cgttaagccg
     6541 tgagcaaatt gaacgtatta tcgaaaaagc gaatgctttg ggtattctgt atgcctttat
     6601 tacgccaatg acgattgcag tttccgaaac caatccgatt gtgcacgaag cggttttacc
     6661 gatcacaccg aattatttga tcgatccaca ctactacgaa aaagagaaaa ttgtgcaaat
     6721 gttactgttc tacaccgaag agcagaaaca agcggtcgaa aatagtggca tttttgcaaa
     6781 tgatttaaaa gaggctcgct ggcaccccaa tgcggtagat attctgcgaa aagaaaattc
     6841 gaaagctcgt ggcattcaag atgtattagc aaccttgaat attgagattg aaagtgcgat
     6901 ggcatttggc gatggtatta acgacttgga aatgctcccg accgtaggtg ttggtgtggc
     6961 aatgggtaat ggcgtgccgg aattaaaagc ggtggcagat ttcatcacca agccgcttga
     7021 ggaagacggc attctatacg ctcttgaaac tcttgaggtg atttaaaagc aagcggttgt
     7081 aagtttttct ccatttacaa ccgcttgtag tttctaatta cgcctaaata gcttatcgcc
     7141 tgcaatcgct aaaatcgccc cactgacgac caccaacgcc ccaagataac tgatccaatt
     7201 catatccggc ttggcaaaaa tatgcggata aaaatagtag ctaaggttgg aaaagatcat
     7261 cgtaaaaatc ggcaacatcg tggttacaat gctaaccttt gaagtatccc aatgattcaa
     7321 cgcctcaccg tatgaaccgt agccaattaa ggtgttcaac agcaataaat aaagcaaccc
     7381 cacagaaaac catcctcaag attgcctaac tgtgccggtg aggcaaacgg taacatcagc
     7441 agagaacagc cgatgtaaat aataaacagc acttgctgag agttaaattt cgctaataat
     7501 aatttttgag ccacgccgta tagcacccaa atcaagctgg ctccggcact caataacact
     7561 ccgagagcgt aggtgttgag ctgtaaaatt tcagcaaatt tatcgttaaa aaatgcgaca
     7621 agccctgcaa tcaataacac aaatccaatc ttttgaaaca agccgaactt ttccttaaac
     7681 aataatacgc ctagtagaat catcgaaaat ggagctaact gccacaatac ttggttaatg
     7741 gtgggcgaaa catagtgtag agcctctgca aacaaaaaga aatttgccga cagaccacac
     7801 acccctaaca aaattaaacc gagttctttt ttgctacaag cggtcaattt gggtaaacgt
     7861 tttgcaaatc ctagaatcag caatagccct actgatgcca caacgaacct aacccaaact
     7921 aaagtttggg catctatcac tttcaatact tgctgggcgg caatcggtag cgttccccag
     7981 gtcattgctg cggttaatgc aagtgaaaag ccaagtaagg ggcgttgttt catcgtggaa
     8041 attccttttt ctattctatg tttctatatt ttagaaagat tgagatacaa aaaaaccccg
     8101 ccattggcga ggtctcttat tgattttgaa atgattagtc agcaatgatg cttacatatt
     8161 tacggctttt ctcgcctttc acttcaaatt taactttacc gtcagcagtt gcaaataaag
     8221 tgtggtcttt acccatacct acatttgaac ctgcgtggaa tttagtacca cgttgacgaa
     8281 cgataatgct acctgctaat acagattcac caccgaaacg tttaacacca aggcgtttag
     8341 cttcagaatc acgaccgtta cgagttgaac caccagcttt tttagttgcc atcttctaga
     8401 tctcctctga aattatgctt gaatcccagt gattttcact tctgtgaacc actgacgatg
     8461 accttgttgt ttacggctgt gtttacgacg acggaactta acgattttaa ctttctcgcc
     8521 acgaccttgt gctacaactt cagccactac ttttgcacct gctacaaccg gtgcaccgat
     8581 tttaacatct tcaccgttaa cgaccattaa cactgagtca aattcaactt tctcaccagt
     8641 tgcaagttca agtttttcta aacgaactac ttgaccttca cttactcggt gttgtttgcc
     8701 gccactttgg aaaactgcgt acatatttac tccgctatgt gccaactgct tttgctttta
     8761 ggcactaaat taattcataa aaatagggtt gcaattctac ggaaaaagat tcgaaagagc
     8821 aagagcgatt ttgagaattt tttgaaattt gcaaaaaatg gtaaaaatac taccgcttgt
     8881 ttcaactgcg actaaaaaac aatagactgc tccgatttta caacaaaatc ataattcttt
     8941 tttgaacaca ggctaaatta aggtagaatc tactcaattt tcgtcttact ttatggattc
     9001 gatggctgtg caactttttt ctttagaaca aattcaagcc cttgcgaatg aagatatgca
     9061 agcggtaaat gccgaaattt tagctcaact taattccgaa gtgctactga ttaaccagct
     9121 cggacattat atcatcgcag gcggtgggaa acgtattcgc ccgttaattg cggtgcttgc
     9181 ggctcgtgcc ttgggttatc gtggtaaaaa gcatatcacg gcggctgctt ttattgagtt
     9241 tgtgcatact gctacacttt tgcacgatga tgtagtcgat gaatccgata tgcgtcgtgg
     9301 cagaccaacc gcaaacgccc attttggcaa tgcggctagt gtattggtag gggatttcat
     9361 ctatacccgt tcgttccaga tgatgacgga tttagactct ctgcgtgtgt taaaagtgat
     9421 gtctgccgcc accaatgcgt tggcagaagg ggaagttcag caattaatga acgtgaacga
     9481 cccaaacacc actgaagcga actatatgcg ggtcatttac aataaaaccg cccgcttgtt
     9541 tgaagccgcc actcaatgcg tggcgattgc ggctgatgct tctgaggaaa ttgaaaccgc
     9601 attaaaaaat tacggttgct acttaggcac ggcattccag ctgattgacg atattttaga
     9661 ctactccgct caaagcgaaa gtttaggcaa aaacgtaggc gatgactttg tggaaggtaa
     9721 gccaaccttg ccattgctcc acgcaatgca cgctgccgac aaagcaggca aaactactca
     9781 agcagagctg attcgcaatg ctatcgaaaa cggcggcgaa ttggaacaaa ttccacaagt
     9841 attggcaatt atgcaagaac atcaatctct ggattatgcc atgcaaaaag cccgtgaaga
     9901 agcccaaaaa gcggtggatt cattaggggt tttaccggaa agcgagtaca aacaagcctt
     9961 ggtttcattg gcgtatttat cggtggatcg ctcttattaa tttgcaaaaa atcatataaa
    10021 tttaaccact tgtaggggca aatgatattt gccccataac ctataattct tttgggcaaa
    10081 tgttatttgc cccaacataa caatgactga acaaaaccaa cgaccccaag aacatattga
    10141 aagcgtacga gcgagacgcc gtgctcaaaa tcagaaaaaa ggcccgaatg ccccgtttgt
    10201 gcgtgagaaa ttaacgctgc caaacggaca taacaaatta ctgctgcact cttgctgtgc
    10261 cccttgctcg ggtgaggtaa tggaggctat tcacgcctcc ggcattgagt ttacgatcta
    10321 tttttataac ccgaacattc acccgctgaa agagtatttg atccgcaagg aagagaatat
    10381 tcgctttgcc gaaaagtggg gtattccgtt tatcgattta gacgatgact acgaaaacga
    10441 ccgcaaagag tggttcaaaa aagccaaagg aatggaatgg gagccggaac gaggcattcg
    10501 ttgcacaatg tgctttgata tgcggtttga aaaagcagcg gaatacgctc acaacaacgg
    10561 tttccctgta tttaccagtt gcttaggcat ttcccgatgg aaagatatga accaaatcaa
    10621 cgactgtggt caccgtgcag cagccaaatt tgatgacgtg gtttactggg actacaactg
    10681 gcgtaaaggc ggcggctcac aacgaatgat cgaaatcagc aaacgtgaac gtttctacca
    10741 gcaagaatac tgcggttgcg tctattcgtt aagagatagc aacaaatggc ggttggaaac
    10801 agggcgtcag cggattgaaa tcggtaagct ctattactca cccgattaaa tgttactttt
    10861 ctttgcttcg ccaaagaaaa gtaaccaaaa gaaaggcgac ccgaacttcg cttagttacg
    10921 atttccttaa cggaaaattt gtaaactcgc tacgctcaaa cagtacaaat tttcctagaa
    10981 atcgcaagtc gctcagacgg gacaagcggt acattattca aaatttttta caaaatatag
    11041 tgatgtactc ttcccttctg aaccgcccga acgtgtttga attggtagga aaatttactc
    11101 tgagcgaagc gaatgtaaat tttccgtgaa accaattcaa actaagtgag gataagcggt
    11161 gaagtagggg tgtttctttg gttactttct ttgcacatgc aaagaaagta acgaaaactc
    11221 agatatagat ttcaacttaa aaatttacag aaggaataat aacaaatgtc aaaattcgct
    11281 atggttttcc ccggtcaagg ctcacaagcg gttggaatgc ttgccgacct tgcgccacaa
    11341 tatccaatcg tggaagaaac cttcaaacaa gcaagtgatg tgcttggcta tgacttatgg
    11401 gatttagtgc aaaacggtac tgccgaagag ttagggcaaa cccaccgcac tcaacctgcg
    11461 ttgcttgcct caagcgtggc acttttccgc atttggcaac aaaaattccc tgagcaaaaa
    11521 ccagccgtga tggcagggca tagtttgggt gaatactcag cgttggtgtg tgccggtgtg
    11581 ttggatttcc aagatgcgat taaattggtc gagttgcgtg gtcgtgcaat gcaagaagcc
    11641 gtgccggcag gcagcggtgc gatgtttgcg attatcggtt tagataacga aagcattatt
    11701 aaagcgtgcg agcaagcagc aagcgagacc ggtgaaattg tctctgcggt aaactttaac
    11761 agcccggggc aagttgtgat tgccggcaca aaagcagcgg cagaaaaagc aggagaattg
    11821 tgtaaagccg caggtgcaaa acgtgcgtta ccattagcgg tgagcgtacc ttcacactgt
    11881 gctttaatga aaccggcggc agaaaaatta gccgaagcct tgcaaaatat tgagctaaat
    11941 caaccgcttg tccctgttat caacaacgtg gatgtggcag tggaaacaga tgccgatacc
    12001 attcgtaatg cacttgttcg ccaactttac agccctgttc gttggacgga aaccgttgaa
    12061 aaaatggcac aagatggcat cactacttta tatgaaatcg ggccaaacaa agtcctaacc
    12121 ggtttagcag gtcgtattgt aaaagaatta tcagccaaag cggtaaatga tgttgccagc
    12181 tttgaggcgg ttgaggctta attttcggga gcgtaaaatg agtaaagaaa ccctatttat
    12241 gctaataagt gcattgattg ccttagtgat tttaccttta gcttatactg ttggtatcgc
    12301 taaagaaaca ttaggcggaa atatgggaat gttatccatt gctgccggtt gctcattttt
    12361 agcctatttt ttaagtctaa acccgaaaat tcgccacgcc tttatcggag gttcagctat
    12421 tacagctgct gctattcaag cttgggtatt atatggtgtg ctattaagcg aaaatgaccc
    12481 caaaagtgcg gtcgttttat ttcaaattta tctgtttagt agtttagggc cactgttttt
    12541 ttcagctatt tgggcattta ctcgcccacg ttggatttac cctaaacaag gtagtgcggt
    12601 gaaatatgcc ttatttggtg gcttaacgac cgtgataaac tacttgatta ccctttttat
    12661 tttttatatt ctgacgttat aacgtcatac taaggagaat ttatgagcaa aatcgcatta
    12721 gttacagggg caacccgtgg aatcggcaaa gcgattgccg aagaattggt agcaaaaggc
    12781 tacatcgtag tcggcaccgc aacctctgaa aaaggggcgg aatctatttc agcttattta
    12841 ggcgagaacg gcaaaggctt agtgctaaat gttgccgatg cagagtcgat tgagagcgta
    12901 ttaaagcaga tcaaagagac ctttggcgat gtggacgtgt tagtcaataa cgccggcatt
    12961 acccgtgacg gcttattaat gcgtatgaaa gatgaggatt ggttcgacat cattcaaact
    13021 aacttaactt cggtttatcg tttatccaaa gcggtattac gcccgatgat gaaaaaaggc
    13081 ggacgcatta tcacgatcgg ttctgtggtc ggctcaatgg gcaacccggg gcaaaccaac
    13141 tactgtgctg ccaaagcagg cttagttggt ttttctaaat ctttagcgaa agaagtagca
    13201 agccgcggca ttacggtaaa cgtggttgct ccgggcttta tcgccactga tatgaccgat
    13261 gagctaaccg aagatcagaa aaatgcgatt ttaagccaaa ttcctgccgg tgaactcggt
    13321 tctccacaag atattgccaa agcagtcgct ttcttagcca gcgatgatgc ccgttatatc
    13381 aacggtgaaa ccattcacgt taatggcggt ttatatatga gctaatccgc tacaagcggt
    13441 cttttttcaa ccgagctttg taaattcaga gttcggtttt gttatttgtt attttgtgtt
    13501 atcacctgct ttataggtat aggtgaaaaa gtgtgaatat gttatgacta gaaatacatt
    13561 agtagtaggc tttttattgt ttgctatttt ctttggtgcc ggcaatctga ttttcccacc
    13621 aaaattaggt tatgaaagta gtacagaatt tttctcagcc atttcaggct ttgttttaac
    13681 tggagtaggg cttcctctac tcggtattat cgtcagtgca ttttataatg gaggctataa
    13741 atctgcatta gacaaaatcc acccttggtt ttctttagca ttcctaactt ctatctattt
    13801 agcgatcggt ccattctttg ccggtccgcg cacggcagca actgcctatg aaatggcgat
    13861 aatgccgttt ttaggggatt ccagccaagt gtcaatgtta atttttacct taatttactt
    13921 tgcctttacc ctatggttag cgctaaatcc aaataaaatg gttgatcgca ttggtgcaat
    13981 tcttaccccg atcttgctta taaccatcat tggattagtt attcgagccg gctttatttt
    14041 agataccgat ccacaaatca ctacgcctaa tacgaatgaa caatcttact tttttaaagg
    14101 tatggttgat ggctatctaa ctatggatgc acttgcttcg ttagcctatt cggtaattgt
    14161 attaaatgct attcgtggga aaggggtaag ccaagccgca ttacaacgcc aaacagtttc
    14221 tgccggctta gttgcagcag ttgctctagc tgtaatttat atttcattgg gttggattgg
    14281 taataatatg ccaattagtg caaacacact ttcgatgtta tcagaaagaa aattggatct
    14341 aggtacttac attcttaaca ctgtgactac ccaagccttc ggtgaactcg gacgtagtgt
    14401 cttaggagtg attgtttcac ttgcctgttt aaccactgct gtcggtttag ccgtatcagt
    14461 cagtgaatac tttaatgaaa ttttcccgaa aatttcatat aaagtttatg ctatcttatt
    14521 tactgtgatt agttttactg ttgctaacca aggattaaaa gaagttatta gcaaatccat
    14581 tccggtatta ttagttctct acccaatagc aatgactgtc attttaatgt tgctgattaa
    14641 tttagtgatt aaacttccgt tgtctgcaca acgtctatca ctcctattag tgacaattgt
    14701 agcgatagct tcagttgccg gtgtcgggtt taccgaaaac ttgcctctaa aatcctactc
    14761 gatggaatgg ctacctttcg ctatcattgg agctattatt ggagcaatta tccacccgct
    14821 taccggtcga aagcataaat aaagtaaagg cagtgagcat tcactgcctc ttttttagga
    14881 gagaataatg cctgaattac ccgaagttga aaccagcgtt cgtggtgtat cgccctattt
    14941 ggttgggcaa actattgaac aaatcatcgt tcgtcagcca aagttacgtt ggacggtgag
    15001 tcctgaatta agccaaatgg caggggcaaa aattaccgca gtagaaagac gtgccaaata
    15061 tctgattatc cgcaccgaca aaggcgatat tttggtgcat ctgggaatgt ccggctcgct
    15121 cgggattttg caagaacgtc aacaaaaaga aattggcaaa cacgaccacg tcgatcttat
    15181 tacccaaaac ggcacaattt tacgctataa cgaccctcgc aaattcggct gttggctatg
    15241 ggcagaaaaa gcagaagatc acgaactgtt gcgtaaactc gggcctgaac cgctttcaaa
    15301 cgatttcaca gcagattact tatttgcaaa aagccgcaaa aaaacgaccg cttgtaaaac
    15361 ctttattatg accaatgaag tggttgttgg ggtggggaat atctatgcgt gcgaaagttt
    15421 atttatggca ggcattcacc ctgagcttgc agcacaaaac ctgactaaaa aacagtgcga
    15481 acgtttagta aaaaccatca aagaagtgct gactaaagcg attattcaag gcggcacaac
    15541 actgaaagat tttatccaac ctgacggcaa accaggctat tttgctcaag tgttgcaagt
    15601 gtatggaaga aaaggggaaa cctgtaatga ctgcggaaag ccgattgaaa ctaaagtaat
    15661 cgggcaacgt aatacctatt tttgcccgaa gtgtcagaga ttgccgaagt aatctaataa
    15721 taaactctct ccccctgagg gagagagaca gcttgttgaa acgttaagtg aaacaagcag
    15781 agagagggta aaacctaaac ctgcaaccaa aaggtaacag gcccgtcatt ttgtaggctg
    15841 acttgcatat cggctgcaaa ttgcccggtt tgggtatgaa tcttagtggc ggcttgttga
    15901 tgaaagtagg catacaaacg ttcggcatca accgggcttg ctccttttga gaaactagga
    15961 cgcaagcctt tattggtatc cgccgcaagg gtaaactgtg aaaccactaa caaactgcca
    16021 cctgcttgct gtacgtttaa gttcattttc ccctcgctat ccgaaaacac ccgataattc
    16081 agcacttttt ccagtagctt atctgctttc gcttcatcat cgtctttttc cacaccgagc
    16141 agcaccaaca aaccgcttgc aatttcgcca acgacttgcc cttcaacctc cacttttgcg
    16201 aatttaaccc gctgaattaa gcctatcatt aatgctcccc ttgtctgttt ccatttcgtc
    16261 taaaaccgcc gcaaattgcc cgccaagtaa taccacctgc caacttaact gaatccataa
    16321 cagcataatc ggtaacaccg ctaatgctcc ataaattgcc tgataagacg ggaaggcagt
    16381 aatataccaa ataaaggctt tcttccctaa agtaaagaaa atcgctgcca ttaatgcccc
    16441 gatagcagcg tgttgaaatt ttacctttct aattggaata aatttataca ctaaggtaaa
    16501 aagtagccaa attagcaaaa acggcatcaa ttctaataaa tgctgcccga gcgataacgc
    16561 tccatttcca ttaaaaatag aaagcgacat tacataggtg ctaatcgcaa tgctagcacc
    16621 ggcaagcagc gggccaaaca gcaaaatgag aaagtaaagc aagaaagaga accacatcgg
    16681 acgctgacga ttatcgtgcc aaatggtatt caatgcctca tcaatactct taatcagcat
    16741 aatagtaacc acaaataagc cgataaaact taccagcccc atttgtttgg cattactgac
    16801 aaacaactca atgtattccg acaccatctc gctcgcactc ggggcaaagt tgtcataaat
    16861 gaacgctttt aactgctcgt ttgcttcgtg gaaaatcgga aaaaaggtaa aaatggaaaa
    16921 cagcacgaca ataaacggca ctatcgccag cattgtgcta taagtgagat aaccggctga
    16981 aatcgcaatg ttattttcat tgtaacgctt ggcaaagagc ttaataaatc tccacagtcg
    17041 atttaacatc ttaacctctc accaaataat cgccttcaca cacccatttg taggtggtta
    17101 aggcttctaa tcccatcggg cctcgtgcgt gtaatttctg cgtgctaact gccacttctg
    17161 cccctaaacc aaactcacca ccatcggtaa aacgggtgct ggcattaata taaaccgccg
    17221 cggcatcaac ctgttgtaca aattgacggg caagttgata atcggaggtt aaaatcccct
    17281 ctgaatgctg cgaaccataa tggcggatat gctctaccgc ttgttgcagg tcattcacca
    17341 ccaccacgtt aagatcaagc gataaccact cttggctcaa ttttgcttga tcaagcggtt
    17401 caattccttc aattttttgc aaatcgttac tgtgaatagt aacgccaagc tgttgcattt
    17461 tggcgaccaa tttcggcaaa aattccaccg caatcgcttt ttccaccaac agcgtttcca
    17521 gcgtattgca agtgcttggg cgttgcgttt tggcattagc gatgacctct agagatttct
    17581 cctgatccgc tgttttttcc acaaacagat gacaaacccc aatccccccc acaatcaccg
    17641 gaatggtcga attttcttta cagaattgat gtaaacctgc accgcctcga gggatcacca
    17701 tatcaatgta gcgatctagc ttcaatagtt ccaataataa ggctcgatcc ggatccgtca
    17761 ccgcttgcac tgccaatttc ggcaagccgg ctttttctaa cgcatcttgc actacatcaa
    17821 ccaacacagc attggtaaat ttggtctctt taccgccacg caaaatcact gcattgccgg
    17881 tttttaggca taatgatgcc acatcaatgg tcacattcgg gcgagcttcg taaatggtta
    17941 aaatcacccc gagcggcaca cgctggcgtt cgattttcaa accgctgtct aacacgccac
    18001 cgtccatcac ctgccccacc ggatccgcta atttggcaac atttcgcaca tcgttagcaa
    18061 tgtcttttag ccgatcttca ttcaataata agcggtcaat aatcgccaat gaaatccctt
    18121 gtgcttgagc aaattcaata tctttggcat tagcgtataa aatttcttct gcacgttgct
    18181 caaggctatc ggcaatcgtg agtaaggctt ggtttttctg taggttgcca aattgagcca
    18241 gctcaaaact agcttgtttg gcttgctggg caagttctat catctgcata aattaggtct
    18301 catttaatca atattctcca taatctaaca cgttctttta tgtgaagaaa tatgcaaaag
    18361 ccaagaaaat tggataaaat gggggaattt taaaacatta cgcaattccc ctctccctga
    18421 tttttctcct gaacggagaa aaatctatcc ctctcctaca aggggagagg gtagaattta
    18481 actctctccc cttgtgggag agagaccgcc tacagattcg ttcagaatct gtaggcagag
    18541 agaggggtaa aaacagataa aacttaaaca aaatgataaa cactacccct aaacagctaa
    18601 tccacattct tccgcctcaa ctggcaaacc aaattgctgc cggcgaggtg gtggaacgcc
    18661 ctgcgtctgt ggtaaaggag ctagtggaaa acagtttaga tgccggagcc aatactattc
    18721 aaatcgacat tgaaaaaggc ggctctcagc ttatccgcat tcgagataac ggttgtggta
    18781 tcagcaagca agatttaccg ctggcacttg ctcgccacgc tacgagcaaa atcagcagct
    18841 tggaagattt agaagccatt ttaagtttag gctttcgggg cgaagcattg gcaagtatca
    18901 gctcggtttc acgtttaaca ctgacctctc gtaccgcaga gcaaaccgaa gcatggcaag
    18961 cctatgcaca agggcgggaa atggcggtgg aaattcagcc tgcctcacac ccgattggca
    19021 caaccattga agtagcaaat ctgtttttta acacaccggc acggcgtaaa tttctacgca
    19081 ccgataaaac cgaatttgcc catattgacg aggtggttcg ccgcattgcc cttgccaagc
    19141 cgaatatcag tttcagctta agccataatg gtaaaatcgt ccgccaatat cgcaaagtgc
    19201 aagacaattc ggtagagcag caacaaaaac gggttgcagc catttgcggt gatgagttta
    19261 ttcaacattc aacttatatt gacaggcaac acggggatct gcacctacac ggctgggttg
    19321 gctcaccggc tcttgcccgt ctgcaaaacg acctttgcta cagctatgtg aacgggcgaa
    19381 tgatgcggga taaaaccatc aatcacgcca ttcgccaagc ctacggcgac agcattgcaa
    19441 gtggttacta tccggctttt gtgatctttt tggatttaga tccgacaatg gttgatgtaa
    19501 acgttcaccc ggctaaacac gaggtgcgct ttcatcaagg aagactggta cacgacttta
    19561 ttttgcaagg cgtactcaac agcctgcaac aaacccaacc tacgcttgaa ctgcgaaatg
    19621 aagtgaacga gccgttaccg agctatgttc aagacactaa ccgccaagct gcggggcaaa
    19681 atatttttgt gtcgcaaacc gctccacaag cggccgaatt tacgcaaaaa aatgcaagtc
    19741 gatcaagcta tacgcctaaa tttgaacgaa gcaacagtgt gagttcgtcc gctcaaaaat
    19801 ggtataagga attggttggt ggcgatttgc accaaacaac gccaactatc aaaacgcaaa
    19861 gcacgcttgt tgagccaaaa acagaacccc aaactgaaca taaaacagaa gccgtttcgc
    19921 aaaaaattac gcaaattgca ccgcttgcaa gccaccattc acaagcctta gcgattgtaa
    19981 aaaaccaagc ggtgttaatt aaagaagagg aaaattttta cctgcttcca ctggcaacat
    20041 tagccgagct taaactcaag ctacaactgg aaaaagggca atctcaagcg ttgttgatcc
    20101 cactgaatct cagtttagat caacaacaaa ccgaacgctg gcaacaaacc aaagaagaac
    20161 taactaagct tggcttttcg atcagcgaaa aacagtggca agcccaaaca cggctcacag
    20221 tgctttccgt accacaggct gtcagagaac aaaacctgca acagctttta tttgctctgt
    20281 tcaaccaaac acaagcggtc aatttagccg aattttttgc aaaaaaatgc gaaaaaccca
    20341 ccgcttgtac gctaagtgac gtgattgctc tactctcaga aattgagctt tatgccaatg
    20401 ggaaaaaaga gctggaggga ataaggaagg aagtggattt ttccaagttt ttatagtcta
    20461 aagggcaata ccctttagcc aaataaatga gagtggctgc caattcgcag cagctctagc
    20521 ttatcatctt ccacttttcg atagataaga accaaatcag gttggatatg gcaatcccta
    20581 aagcctttcc attcgccggt taaagcgtga tcgcagtatt tctcaggtaa tggcttgtca
    20641 ttaatcagaa aatacaacgc ctcaattaat gaagaggata aagactcaac cgcacatttt
    20701 ttatagtcac gtttaaaagc attactatac tcaatctctc gcattgagtt gctccattaa
    20761 atccgcaata ctatttgctg aatgtagctt ttcctcgcca ttcttaacag cccttaatac
    20821 ttctgctgtc tcaaaattag gctgataatc aaactgaaaa cgtttttctg ttgcgatttt
    20881 cgctaatgtc attcgcatca catcagagac agtcaagccg ataccggcta acacctcact
    20941 tgcttgctct ttaatttcag ggctgattct tacgcttact aatgcactat ttgccatcaa
    21001 aaactccttt tgtatatcaa atgatataca aaataacatt taacaaaaaa ttgtgcaata
    21061 aaaaagaaat tcaaagaaaa gaaatgaata gttaaaatta gctcgttaca agaaatcatt
    21121 gagttactca agaaatcaag gtaatataaa gaagtctggg cggaacacga acccgcccct
    21181 agcatctagc cgcttacaag aacagataga ttagttgaaa gagcgtgaaa atttcaactg
    21241 ctgcacacag aaacccaagt gcaactaaaa tcaatagtag ttctttcatt gtaagcctcc
    21301 ttagtgctac taaggatgat ttaggctcag gctactgcga atagccctaa cgagcctacc
    21361 agtagcacaa tcaggattgt aacaaaaaag ctgtgaattt cacg
//
LOCUS       DANLTI010000032        21037 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.032, whole genome shotgun sequence.
ACCESSION   DANLTI010000032 DANLTI010000000
VERSION     DANLTI010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21037
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.032"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            54..1817
                     /locus_tag="PXB09_000937"
     CDS             54..1817
                     /locus_tag="PXB09_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDL5233073.1"
                     /translation="MIRYFFSLVLSLLMINSSHANLFSQPKFLKSEEAFVFSIQNENE
                     TLQLNWDIADNYYLYKKEIRVTPQNIEIGDITFPAAEQYNDEFFGQVEIYRNHLGLKV
                     PFKEIKDNASIVVEYQGCTKGFCYPPERVELKLDSILSATPEELAQLEAQAVEKSENF
                     AKTDNMAPPENVAKAEQDQLAENLANNRFSIFWFFVLGVGLAFTPCVLPMLPLLSAIV
                     IGNKQRPSTAKALLLSIAYVQGMAVTYTLLGLIVAAIGLPFQIALQSPPVLIGLSIVF
                     ILLACSMFGLYEIQLPNSWQQKLNAMSQKQQGGALGSVFLMGMIAGLIASPCTSAPLS
                     GALLYVAQSGDLVTGGLALYLLALGMGLPLILITLFGNKILPKSGEWLLKVKAAFGFV
                     MLALPVFLLSRVLPSHYEPFLWSALAVAFLIWLVDAIPSNSITKKIIKVLLLLALAIA
                     AKPWADLAWNGSTTQQQTTPHLALEKIQSLADLETKLTASKGKKVMLDLYADWCVACK
                     EFEKYTFSDQNVQNKLNEMVVLQIDMTKNSAENIELMKHFNVLGLPTILFFDENGNEM
                     SQSRVTGFLDAEQFLAWLNKL"
     gene            1827..2396
                     /locus_tag="PXB09_000938"
     CDS             1827..2396
                     /locus_tag="PXB09_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDL5233074.1"
                     /translation="MNQENHKIEDIIRIFNQCFSDEYNTRLERGGNYPIYLPEFMDED
                     GVPSERPYNVILFAHGYYSSALHEIAHWLVAGEARRKLEDFGYWYEPDGRSAERQREF
                     ESAEIKPQAIEWVLATAAGFRYFASADNLSGNPGDNSAFKQAVYDQVKLYAERGYLPK
                     RAETLRKALCAFYGTPDVIDLAQFDIERI"
     gene            2622..4400
                     /locus_tag="PXB09_000939"
     CDS             2622..4400
                     /locus_tag="PXB09_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDL5233075.1"
                     /translation="MSTLDFHFIHRFHQQVQALSHHPALRFMQDEKWSEISWLELQKQ
                     VNNLSYALLANGLAVQEKIAIFAQNMPRWTITDIAAMQIRAVAVPIYATSTTKQLEYI
                     LNDGDIKILFVGDQEQYDQAIEIANNCSLLIKIVAMKDSIDLRDFPIAQHWQDFIKVN
                     QDEAELTKRLNDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLQAHNKALPHIDEN
                     DISLSFLPLSHIFERAWVTYVLYRGAVNCYLEDPQQVRQALSTVRPTLMCAVPRFYEK
                     IYTAVWDKVQQAPIHRRALFKWAIRTAEDNLFGKKSAFFHRLQYIMADKLVLGKLRAL
                     LGGRIRMMPCGGAKLDPSIGLFFQSIGINVKLGYGMTETTATISCWQEKGFNINSTGT
                     LMPDVEVKISEENEILVRGGLVMKGYYKKPEATAQAFTAEGFLKTGDAGELDSEGNLY
                     ITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEE
                     YAKKLNIRYQDRLELIKHYEVVRMFEQRINELQKDLASFEQIKKFTLLSQAFSTKMEE
                     ITPTLKLRRKVILERYKQQIEKMYES"
     gene            complement(4433..4777)
                     /locus_tag="PXB09_000940"
     CDS             complement(4433..4777)
                     /locus_tag="PXB09_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5233076.1"
                     /translation="MIQRFEVGSRFSEMAIHNGVAYLAGQVPLDDTADAYTQTQQVLA
                     EIDKWLAKANSDKSKILMATVYLKEMADYAEMNRAWDEWVAPNNAPPRAAVEAKLANP
                     NWKVEIVVTAAV"
     gene            complement(4786..5334)
                     /locus_tag="PXB09_000941"
     CDS             complement(4786..5334)
                     /locus_tag="PXB09_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDL5233077.1"
                     /translation="MAKLFANSTACLYLENMKKLIFLGLSALALAGCSSTISNPNQLI
                     GQWQCTIEYDDFNIRTVDNLRFSTNGTMTNQGGIYYPIQKSIFEYSLQQNGRWSVKNG
                     AIVYRIVSESVQRSHRSQIWSELQRDAELQQFEENLFSSLSDSDNNKTVELIITDFDE
                     KEMDIKQEIKGHKAYKGQCIKQ"
     gene            complement(5361..6398)
                     /locus_tag="PXB09_000942"
     CDS             complement(5361..6398)
                     /locus_tag="PXB09_000942"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDL5233078.1"
                     /translation="MALKELDWANLGFSYIKTDYRFIAHWKDGKWNEGELTQDNTLHI
                     HEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAERMQRTADRLLMPRVPTELFIR
                     ACKKVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKAAPEFIFSVFCCPVGAYFKG
                     GLAPSNFITTDYDRAAPMGTGGVKVGGNYAASLLPHELAVEQSSTTRKFADAIYLDPK
                     THTKIEEVGAANFFGITKDNKFITPISESILPSITKYSLLHLAQERLGMEAIEGDVYI
                     DQLDQFAEAGACGTAAVITPVGGIQHKDKFHVFYSETEVGPVTRRLYAELTGIQFGDV
                     EAPQGWIVKVE"
     gene            complement(6540..6866)
                     /gene="grxD"
                     /locus_tag="PXB09_000943"
     CDS             complement(6540..6866)
                     /gene="grxD"
                     /locus_tag="PXB09_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDL5233079.1"
                     /translation="METIDKIKQQISENPILLYMKGSPKFPSCGFSARAVEAVINCQV
                     PFGYVDILTNPDIRAELPKFANWPTFPQLWVEGELVGGCDIVLEMLQKGELQTLLKET
                     AAKHAA"
     gene            complement(6938..7543)
                     /gene="recR"
                     /locus_tag="PXB09_000944"
     CDS             complement(6938..7543)
                     /gene="recR"
                     /locus_tag="PXB09_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDL5233080.1"
                     /translation="MQTSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALS
                     KALNEAMSHIGHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFS
                     GRYFVLMGHLSPIDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEM
                     CRMYNVKATRIAHGVPVGGSLEMVDGTTLSHSFAGRRDIDI"
     gene            complement(7551..7880)
                     /locus_tag="PXB09_000945"
     CDS             complement(7551..7880)
                     /locus_tag="PXB09_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDL5233081.1"
                     /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLP
                     PGMKFPF"
     gene            8020..9105
                     /gene="recF"
                     /locus_tag="PXB09_000946"
     CDS             8020..9105
                     /gene="recF"
                     /locus_tag="PXB09_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDL5233082.1"
                     /translation="MALTRLLINHFRNIQHTDLAFSPHFNFLVGANGSGKTSLLESIF
                     YLGHGRSFKSHISNRIIHYDKDDFVLHGKIDEAKHSWSVGIQKFRSGETTLKINGEDG
                     NKIADLAHLLPMQVITPEGLTLLNGGPSFRRAFLDWGLFHQHPDFYAHWNNLRRLLKQ
                     RNSALQQVRSYQELKAWDIELVKTTYAVSEMRAEYAEALRPEIEKTCQFFLPEIEIGL
                     SFHQGWEKGADYAEILAQGFERDKALGYTMIGAQKADFRFKANGLPVEDVLSRGQLKL
                     LMCALRLAQGEHLVAQKQRQCLFLIDDFASELDPTKRELLAHRLRESGSQVFVTAITQ
                     DQLNQMQWQDRSDDCLFTVKNGEIQPQ"
     gene            complement(9296..10417)
                     /gene="tyrA"
                     /locus_tag="PXB09_000947"
     CDS             complement(9296..10417)
                     /gene="tyrA"
                     /locus_tag="PXB09_000947"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDL5233083.1"
                     /translation="MNPLAPLREQIDQVDQQLIALLSERLALVAEVGKVKSEHGIPVY
                     APERETAMISARRSEAEKQGIPADLIEDVLRRIMRESYANENKHGFKRVNSDIQKIVI
                     VGGKGKLGGLFGNYLTLSGYNVEALGRDDWDNAEQILANADVVIVCVPIANTLATIER
                     LQSYLTENMILADLTSVKHQPLQKMLEVHNGAVVGLHPMFGPDIASQAKQVVACCHGR
                     FPERYQWLLEQIKIWGAKIEEIEAAAHDNAMTYIQALRHFSTFAFGLHLSRQPVQLSQ
                     LLALSSPIYRLELAMIGRLFAQDGSLYADIIADKPENLATIETLKESFEQGLDFFKRN
                     DKAGFIKAFEEVHHWFGDYSEQFLKESRVLLQQAHDSRK"
     gene            complement(10472..11530)
                     /locus_tag="PXB09_000948"
     CDS             complement(10472..11530)
                     /locus_tag="PXB09_000948"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDL5233084.1"
                     /translation="MNTVFNQDSVHNVNIQDEKVLLTPQELKQEFPLPEHLRNQIERS
                     RKTISDIIHRRDKRQLIVIGPCSIHDPVAALEYGKKLKALSEQVSDKLYIVMRVYFEK
                     PRTTVGWKGLINDPKMDGSFDVETGLRIARKLCLDLAELGLPLATEALDPMTPQYLAD
                     LFSWSAIGARTTESQTHRELASGLSMAVGFKNGTDGDLAVALNAMQSSAQSHSFIGIN
                     QQGQVTLLKTKGNADGHIILRGGKTPNYEKQYVDDCEWVLKQANLPTAIMIDCSHGNS
                     NKDYRRQPLVAENVLEQLLAGNTSIIGLMIESNLHAGNQSSELPFEQMKYGVSITDAC
                     IDWQTTEELLTHFAEKLR"
     gene            complement(11570..12607)
                     /locus_tag="PXB09_000949"
     CDS             complement(11570..12607)
                     /locus_tag="PXB09_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5233085.1"
                     /translation="MHNKLLSICILRLSAIGDVCHTLAVIQAIQRKYPSAEITWIIGK
                     TEAYLMKDIPNVHLIPYDKKIGWKGIFTLWQKLSHKRFDFLLNLQTAFRASILSLGIK
                     AKKKIGFNQDRAREMQWLFTNQKVEMTDSPHVLDGQMMFAKAIGIMDLSAQWNLPVSD
                     EDLAYGKQFIDFTRKNILIAPCSSKKEKDWLPERYAEIANWLSKQNINVLIAGSPSQY
                     EMETAAKIQQLAPNCTSIAGKTTLKQLAGVIRQVDLVISSDSGPAHIATTQNTPVIGL
                     YAIHNPRRTGPYNDLDKVVSVYDEAILQSYGKPWQQLAWATKAKGKNWMEKITVESVK
                     QKVVETLKITL"
     gene            complement(12703..14142)
                     /gene="pyk"
                     /locus_tag="PXB09_000950"
     CDS             complement(12703..14142)
                     /gene="pyk"
                     /locus_tag="PXB09_000950"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5233086.1"
                     /translation="MSRKLRRTKIVCTMGPATDRGNTLEKIIAAGANMVRMNFSHGIP
                     EDHIERANKVREIAARLGRHVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPR
                     GEGHQEAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLEVEGVKVHTEVTVGGPLSNNK
                     GINKLGGGLSAPALTDKDKEDIKLAAKIGVDYLAVSFPQSSADLHYARELAKEAGLEA
                     KIVAKVERAETVATEEAMDDIILGADVVMVARGDLGVEIGDAALVGVQKRLIRRARKL
                     NRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGETANGDYPVETVKSM
                     AEVCLGAETMPSINISRHRMEGTFKSIEEAVAMSAMYTANHLEGVSAIISLTHSGETA
                     KLTSRISSGLPIYAMSRNQKALNLCALYRGVTPVYYNEDSRTMEGAKKAIAQLKEQGY
                     LLTGELVLLTHGDELKAGGTNTCRILRVE"
     gene            14269..14757
                     /gene="sixA"
                     /locus_tag="PXB09_000951"
     CDS             14269..14757
                     /gene="sixA"
                     /locus_tag="PXB09_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDL5233087.1"
                     /translation="MNIWIMRHGEAGFNASSDAARCLTDNGIKNTISQGKWLGEHLAN
                     QQIQLDKILVSPYLRAQQTLENVLIGMQAVNFPQHFTNLIESWDEVTPDGNPHTVESY
                     LHFLREEGAKNILLISHLPLVFDLVQILTNNQSNVQFPTSTIAEINWVKTKAELIRVK
                     HT"
     gene            14981..15970
                     /gene="dusB"
                     /locus_tag="PXB09_000952"
     CDS             14981..15970
                     /gene="dusB"
                     /locus_tag="PXB09_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDL5233088.1"
                     /translation="MQIGQYAIKNRIFLAPMAGITDQPFRRLCSQLGAGLTFSEMMST
                     NPDVWHTEKSRLRLAHHDEIGLNAVQIAGSDPVEMAKAAKINVEYGADIIDINMGCPA
                     KKVNKNMAGSALLRNPKLVAQILDSVVNAVDVPVTLKIRTGWDQENRNCLQIAKIAEQ
                     AGIKALTIHGRTRSCLFNGEAEYESIKAVKEAISIPVIANGDIDSAEKAKFVLDYTKA
                     DAIMIGRASFGNPWIFKEINDFFETGLSSPLSIDKKYQLMFKHIEDLHQFYGEEKGYR
                     IARKHVGWYTEKLNPESNFKRTFNTLSSTKEQLYALEDFVKSIHLESQLRKVG"
     gene            15975..16271
                     /gene="fis"
                     /locus_tag="PXB09_000953"
     CDS             15975..16271
                     /gene="fis"
                     /locus_tag="PXB09_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDL5233089.1"
                     /translation="MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNG
                     EDPTELYELVLSEIEHPMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG"
     gene            complement(16376..19162)
                     /locus_tag="PXB09_000954"
     CDS             complement(16376..19162)
                     /locus_tag="PXB09_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HDL5233090.1"
                     /translation="MKYHHFRYSPVALTVLFALSHSYGAATENKKIEENNDLAVLDEV
                     IVTESHYAHERQNEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSG
                     YAIRGVDKNRVSLLVDGLPQAQHYHTLGSDANGGAINEIEYENIRSIELSKGASSAEY
                     GSGALGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGEAGGFEALV
                     IATHRHGKETKIHSEANKLKHNIRRITGFENRYDLYPNSAQNAPGGSFFIVEDTCPTL
                     DCTPRARVKLNRDNFPVRTFPEYTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLD
                     YKSNSVFMKFGYHFNSSHYLGAILEDTKQRYDIRDMQTPAYYTKDDINLSLRNYVYEG
                     DNILDGLVFKPRIPYGLRYSHVKFFDERHHKRRLGFTYKYKPENNRWLDSIKLSADKQ
                     DIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIHLEFDKALNA
                     GQGVFKQTHKLNLGLGFDRFNSLMDHGDMTAQYTKGGYTSYRGRGRLDNPYIYRRDPR
                     SIETVSLCNNTRGDILNCEPRKIKGDSHFVSFRDLVISEYVDLGLGVRFDQHRFKSDD
                     PWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRDHIGLKDNEYV
                     QRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATACKRIIQKSHCFY
                     NYHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDSVND
                     PILDAIQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHRVDLGGKL
                     TGSWYTHDITGYINYKNYTLRGGIYNVTNRKYSTWESVRQSGVNAVNQDRGSNYTRFA
                     APGRNFSLAFEMKF"
     gene            complement(19256..21007)
                     /locus_tag="PXB09_000955"
     CDS             complement(19256..21007)
                     /locus_tag="PXB09_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5233091.1"
                     /translation="MFKLKSSFVLLNAALLAACSSNGGSFDVQSAKVESQTQTTPKKP
                     SLQDDNSNARRTVSASETEALLQPGFGFSAKIPRRNLFPQGKEDVAPIGDIKEITGDL
                     TKIPYEEEVKAYGSSADGFSHTHDRNHKLYTRDFNFVRSGYVLHSGAKPEIKPKEILR
                     TGAHGYVYYLGIEPAKAIPTQKATYKGYWDFTTDARKGRDSKYFSNSAGINIGATPEN
                     SYDINVDDSEKPMGHTGEFTADFANKTLTGTLVRNGYVSRSKEQKITTIYDIDAKIKG
                     NRFSGKANAKNTDDPYFGKSSTTLEGGFFGGKAQELAGKFLADDKSVFVVFAGKRDAK
                     KDDSESAFDAFKIKLKDLNKSEMDTFGNATHLIINNKQIPLIAEGKKSFAEMKFDDLV
                     TRTIDDKTYRVSVCCNNLDYVKFGTYSEGNNSDTAHQYLVGERTAVADLPTGTVKYRG
                     TWDGVMYSKSGSAGAESPSNSESGTRSLFDVDFVNKKINGKLIANDGVEERPMLTLEG
                     NLKGNGFAGTAKTGNSGFNLDPKSTNGGTVVHINTQFEGGFYGPKATELGGIVHSAET
                     DKDRVSITFGGKRQIEK"
BASE COUNT         6197 a         4499 c         3944 g         6397 t
ORIGIN      
        1 aatactgatt acgctataat tttcgccgag acaattaaaa ataggatttc aatatgatta
       61 gatacttttt ttcactcgtc ttgagtttat tgatgataaa ctcatctcac gcaaatcttt
      121 tctctcaacc caaattccta aaatcggaag aagcctttgt tttttcaatc caaaatgaaa
      181 atgaaacatt acagttaaat tgggatattg cagacaatta ttatctttat aaaaaagaaa
      241 tccgtgtcac gccacagaat attgagatag gcgacatcac ttttcccgct gccgagcaat
      301 ataacgatga atttttcggg caggtggaaa tctatcgcaa ccacttaggg ctaaaggtac
      361 cgtttaaaga aattaaagac aacgcctcaa tcgtagtgga atatcaaggg tgtaccaaag
      421 gcttttgcta tccaccggaa cgggttgagc ttaaattaga cagtattctc tctgctacac
      481 ctgaagaact ggcgcaactg gaagcacaag cggtcgaaaa gagcgaaaat tttgcaaaaa
      541 ccgacaatat ggcgccccct gaaaatgtgg caaaagcaga gcaagatcaa ctggctgaaa
      601 atttagctaa caatcgtttt tccatttttt ggttttttgt attaggcgtt ggattagcat
      661 tcactccttg cgtactgccg atgctaccac ttctctctgc gattgtaatt ggaaataagc
      721 aacgcccttc taccgctaaa gcattgctgt taagtattgc ctatgtgcaa ggaatggcag
      781 ttacttacac cttacttggc ttaattgtag cggctatcgg cttgcctttc caaatcgcct
      841 tacaaagccc accggtgttg attggtttat ctatcgtctt tattctgctt gcctgctcaa
      901 tgtttggctt atacgaaatc cagctaccaa atagctggca acaaaaactc aatgcaatga
      961 gccaaaaaca gcaaggtggt gcgttgggta gcgtgttttt aatggggatg atcgcaggct
     1021 taattgcttc cccttgtact tctgccccac tttccggtgc gttgctttat gtggcacaaa
     1081 gtggcgattt agtcaccggt ggcttagccc tctatctact cgcactggga atgggcttac
     1141 cgctgatttt gattacctta ttcggcaaca aaattctgcc aaaatccggc gaatggctgt
     1201 taaaagtgaa agctgcattc ggttttgtta tgcttgcctt accggtgttc ttattaagcc
     1261 gtgtgctgcc aagccactat gaaccgtttt tatggtcggc ccttgcggtt gcatttttga
     1321 tctggttggt ggatgcgatt ccatctaatt caatcacgaa aaagatcatc aaagtcttat
     1381 tattgctcgc tttagccatt gccgctaaac cttgggcaga tttagcttgg aacggctcaa
     1441 ccactcaaca gcaaactaca ccgcacttag cgttagaaaa aattcaatca cttgccgatt
     1501 tagagacaaa attgaccgct tccaaaggta aaaaagtgat gctcgatctc tatgccgact
     1561 ggtgtgtcgc ctgcaaagag tttgaaaaat acacctttag tgaccaaaat gttcagaaca
     1621 aactgaatga aatggtagtg ttgcaaatcg atatgacgaa aaactcggct gaaaatatcg
     1681 agctgatgaa acactttaat gtattaggtt tgccaacgat tctgtttttt gatgaaaacg
     1741 gcaatgaaat gagccaatct cgtgttactg gctttttgga tgccgagcaa tttttagctt
     1801 ggctgaataa gttataaaga aaagaaatga atcaagaaaa tcataaaatt gaagacatta
     1861 ttcgcatttt taatcaatgc ttttctgatg aatataacac tcgcctagag cgggggggta
     1921 attatccgat ttacttgccc gaatttatgg acgaagatgg tgtgccgagc gaacgccctt
     1981 acaatgtgat tttatttgct cacggctatt acagcagtgc cttgcacgaa attgcccatt
     2041 ggctcgttgc tggagaagct cggcgtaaac ttgaagattt tggctattgg tacgagccgg
     2101 acggacgctc tgccgaacgc caacgtgaat ttgaaagtgc ggaaatcaaa ccgcaagcga
     2161 ttgaatgggt gttagcaact gctgccggtt ttcgttattt tgctagtgcc gacaatctct
     2221 cgggcaatcc cggcgataat tcagccttta aacaagcagt gtacgaccaa gtcaagctct
     2281 atgcagaacg tggctacctt cccaaacgag ctgaaacctt gcgtaaagcc ctctgtgctt
     2341 tttacggtac acctgatgtg attgatttag ctcaatttga tattgaacga atttagttgc
     2401 aaaattttta acaaaacaga ccgcttgttg catatacaag cggtctcatt tttgaaaaat
     2461 attgcatttg tactaaacga taccctactt atctatttct attgccttga ttacttccta
     2521 tccaaaaccc tttgtttcag agtacaactg tttctttttt tcatattttc tattatatta
     2581 gcgtacaact gttcactgaa atagaaagta aaaataagat tatgagcact ttagattttc
     2641 actttatcca ccgtttccac cagcaagttc aggctcttag ccaccaccca gctttacgtt
     2701 ttatgcaaga tgaaaaatgg tcagaaataa gttggttaga attacaaaaa caggtcaata
     2761 atctttctta tgccttgctg gcaaacggtc ttgccgttca agagaaaatc gctatttttg
     2821 cacaaaatat gcctcgttgg acaattaccg atattgctgc aatgcaaatt cgtgcggtag
     2881 cagtgccgat ttatgcaacc agtaccacca aacaacttga atatatcctg aatgacgggg
     2941 atataaaaat cctctttgtt ggcgatcagg aacaatatga tcaagccata gaaatagcga
     3001 acaactgttc gctattaata aaaattgtcg cgatgaaaga ctcaatagat ctgcgtgatt
     3061 tccctatcgc tcaacattgg caagatttca ttaaggttaa tcaagatgaa gctgaattaa
     3121 ccaaacgttt aaatgataaa tgcttagagg atttattcac tttaatttat acctcgggaa
     3181 caaccggtga gcctaaaggt gttatgttag attatgctaa tttagctcat caacttcagg
     3241 cacataataa agcactccct catattgacg aaaatgatat atccctttca tttttacctt
     3301 tatcgcatat ctttgaacgt gcttgggtca cttatgtgct atacagaggg gcagtaaatt
     3361 gctatctgga agatcctcaa caggtacgtc aagcactctc aacggtacga cctacattaa
     3421 tgtgtgccgt accaaggttc tatgaaaaaa tctatactgc ggtgtgggat aaagtccaac
     3481 aagcaccgat acatcgccga gcgttattta aatgggcaat ccgtaccgcc gaagacaatc
     3541 tgtttggtaa aaaatcagcc tttttccacc gcttgcagta cattatggca gataaattgg
     3601 tgctaggaaa attacgagcc ttactaggcg gtcgtattcg tatgatgccg tgtggaggag
     3661 ctaaattaga tccgtctatc gggctatttt tccaaagtat aggcatcaat gtaaaacttg
     3721 gatacggaat gaccgaaact actgccacta tttcatgctg gcaggaaaaa ggctttaata
     3781 tcaactcaac cggtacctta atgcctgatg ttgaggtcaa aattagtgaa gaaaatgaaa
     3841 ttttagtgcg tggaggcttg gttatgaaag gttactacaa aaaaccggaa gccactgctc
     3901 aagcctttac tgctgaaggt tttctaaaaa cgggagatgc cggtgaactg gattcggaag
     3961 gcaatcttta tattaccgat cgtattaaag aattaatgaa aacttcaaac ggtaaatata
     4021 ttgccccaca atacattgaa ggaaaaatag gtaaagataa gtttattgag caaattgcgg
     4081 tgattgctga tgccaaaaaa tatgtttctg cgttgatagt tccttgcttt gatagcctcg
     4141 aagagtatgc aaaaaagctc aatattcgct atcaagacag attagaactc attaaacatt
     4201 atgaggttgt cagaatgttt gaacaacgca ttaacgaatt acaaaaagac cttgcaagtt
     4261 ttgaacagat caaaaagttt acactacttt cgcaagcatt tagcaccaaa atggaagaaa
     4321 ttacgcctac attaaaatta agacgaaagg tcattctaga acgctataag caacaaatcg
     4381 aaaaaatgta cgaatcataa tgaaaaacag agatcgtctt tctgcttttc atttataccg
     4441 cagcggtaac cacaatttcg actttccaat ttggattggc taatttagcc tccaccgccg
     4501 ctcttggtgg agcgttattt ggggcaaccc attcgtccca cgcacggttc atttccgcat
     4561 aatctgccat ctcttttaaa taaaccgtag ccattagaat tttactttta tcgctgttgg
     4621 cttttgccag ccatttatca atttctgcaa gcacttgctg ggtttgggtg taagcatcgg
     4681 cggtgtcatc taacggcact tgccctgcca agtaagccac accgttatgt attgccattt
     4741 ccgaaaaacg gctacctact tcaaaacgtt gaatcatttt tacctctact gttttataca
     4801 ttgcccttta taagctttat gcccttttat ttcttgcttg atatccattt ctttttcatc
     4861 aaaatcagtg atgattagtt ccactgtttt attattatca ctatcagaaa gtgagctaaa
     4921 taaattctct tcaaattgtt gtagctccgc atcacgttgt aattcagacc atatttgtga
     4981 acgatggcta cgctgtacag attctgagac gatacgataa acaatagccc cgtttttcac
     5041 actccagcgc ccattctgtt gtaatgaata ctcaaaaatc gacttttgaa tagggtaata
     5101 tataccacct tgattggtca tagtcccatt tgtggaaaat cgtaaattat ccaccgtacg
     5161 aatattaaaa tcatcgtact caatagtgca ttgccattgc ccaatcagtt gattaggatt
     5221 agaaattgtt gaggaacaac cagctaatgc aagtgctgat aaacctaaaa aaattaactt
     5281 tttcatattc tctaaataaa gacaagcggt tgaatttgca aaaagttttg ccaattcgac
     5341 cgcttgttac ttgtgtaaaa ttactctact tttacaatcc agccttgcgg tgcttcaaca
     5401 tcgccaaatt gaataccggt taattctgcg tataaacggc gggtgacagg ccccacttcg
     5461 gtttctgaat agaagacgtg gaatttgtct ttatgttgaa taccaccaac cggcgtaatc
     5521 accgcagccg taccacaagc accggcttcg gcaaattggt ctaactggtc gatatacaca
     5581 tctccctcaa tcgcttccat acctaaacgc tcttgagcaa ggtgtagcaa tgagtatttg
     5641 gtaatacttg gcaaaatcga ctctgaaatc ggggtgatga atttgttgtc tttggtaatc
     5701 ccaaagaagt tcgccgcccc cacttcttca attttggtat gggttttcgg atctaaataa
     5761 atcgcatcgg caaatttacg ggtagttgaa ctttgctcaa ccgccaattc gtgcggtaat
     5821 aaactcgcag cgtagttacc gcctactttc acaccacctg ttcccattgg ggctgcacgg
     5881 tcatagtcgg ttgtaatgaa gtttgagggt gctaagccac ctttgaaata tgcccccacc
     5941 ggacagcaga atacggaaaa aataaattca ggtgcagctt tcaccccaat attttcgccc
     6001 acgccgatta aaaacggacg taaataaagg gttgcccccg aaccgtaagg ccctaaccaa
     6061 tcttgattgg cttttaccac ttttttacag gcacgaataa acagctcggt tggcacacgt
     6121 ggcattaata aacgatctgc ggtgcgttgc atacgctcgg cattttgatc cgggcggaat
     6181 aagttaattg agccatcttt acagcgatag gcttttaacc cctcaaaaca ttgttgccca
     6241 tagtgcaggg cagttgagcc ttcgtgaata tgcagtgtat tgtcttgagt taattcgcct
     6301 tcattccatt ttccgtcttt ccaatgtgca atgaaacggt aatcggtttt gatataagaa
     6361 aagcctaaat ttgcccaatc taactctttt aatgccatgt tgtgtccttt tatttttatg
     6421 ttacgaaata attttgacat tctaaaacaa aatagctctt gaggtaagaa gtttaagcct
     6481 aaatcgcaag aaaaaattaa ggctcttaaa cataagagcc ttaacatact ggtttgaaat
     6541 tatgctgcgt gttttgctgc ggtttctttt aataaggttt gaagttcgcc tttttggagc
     6601 atttctaata cgatgtcaca accgccaact aattcacctt ctacccataa ttgtgggaaa
     6661 gtcggccagt ttgcaaattt tggcaattcc gcacgaatat ccggattggt taaaatatcc
     6721 acataaccga aaggcacttg gcagttaatt accgcttcca ccgcacgagc ggagaaacca
     6781 caagatggga atttcggtga acctttcata taaagtagaa tcggattttc gctgatttgt
     6841 tgtttgattt tgtcaatagt ttccattttt agcctcaaaa taataattta aaatagttga
     6901 gtaattatat cagaattaag ttagcacaga aatagcttta aatatcaata tcacgccgtc
     6961 ctgcaaaaga gtgagaaagc gttgtgccat caaccatttc taatgaacca ccgaccggca
     7021 caccgtgagc aatacgagta gctttcacgt tatacattct gcacatttca gcaatgtagt
     7081 ttgcggtagc atcaccttca atggtcggat tagtcgccaa aatcacttcg tggaaagatt
     7141 cctgttccaa gcgttgttgc aataaatcta agccgatttc acgagggcct ataccatcaa
     7201 tcggcgacaa atgccccatc agcacaaaat aacgccctga aaattgcccg gtttgctcaa
     7261 tcgcttgaat gtcttccggc atttctacca cacaaagttg cccgctcatc tgacggcgag
     7321 gatttttaca aatcgtacac tcttcctctt cggtaaaagt acggcacgat ttgcaatgtc
     7381 cgatatggct cattgcctca tttaaggctt ttgacaacgc cacaccgccg gaacgattac
     7441 gttgcaacag atggtaagcc attcgctgtg ccgatttcgg tccgacaccg ggcaatgcac
     7501 gcaaggcttc catcaaattt tcaagtaaag gactggtttg catacttaaa ttagaatggg
     7561 aatttcatac ccggcggcag ttgcataccg gcagtcacac ttgccatttt ctctttttgc
     7621 atttcttctg cacggcgaac cgcatcgtta aaggcagcgg caactaaatc ttccaccatc
     7681 tctttatcat cttccattaa tgatggatca atttcaattc ggcggcaatt gtgagccccg
     7741 ttaatagtga cttttaccaa acccgcacca gactcgcctg ttacttctaa ttgggcgatc
     7801 tcttcttgca ttttttgcat acgctcttgc atttgctgag cctgtttcat taagccgcct
     7861 aagccacctt ttccaaacat aatttttcct cttaattttc aataaaaaat aaacggctta
     7921 ttctactgaa ccactttcta atccgcaagc ggttaatttt tcccaaaatt ttgcaaattt
     7981 gctaaaatgg ctactctttt tattcctcgc actttaacta tggctttaac ccgtttatta
     8041 atcaaccatt ttagaaatat ccaacatacc gatttagcat ttagcccgca ttttaatttt
     8101 ttagtcgggg cgaacggaag tggcaaaacc agtttgttgg aatcaatttt ctatcttgga
     8161 cacgggcgtt cattcaaaag ccatatcagc aaccgcatta tccattacga taaagacgat
     8221 ttcgtactac acggtaaaat tgacgaggca aagcacagtt ggtcggtcgg cattcagaaa
     8281 tttcgcagtg gcgagacgac acttaaaatc aacggtgaag acggcaacaa aattgccgat
     8341 ttagcccatt tattgccgat gcaagtgatc acccccgaag gcttaacctt acttaacggt
     8401 ggtccgagct ttcgccgtgc ttttttggac tggggcttat ttcaccagca ccctgatttc
     8461 tacgctcatt ggaacaatct tcgccgttta ttaaagcaac gtaattcggc tttgcaacaa
     8521 gtccgctctt atcaagaact caaagcgtgg gatatcgaat tggtgaaaac cacttatgcc
     8581 gtgagcgaaa tgcgagccga atacgccgaa gcgttacgcc ccgaaattga gaaaacctgc
     8641 caatttttcc tgccggaaat cgaaatcggc ttgagctttc atcaaggctg ggaaaaaggg
     8701 gcggattatg ccgagattct ggcacaaggt tttgagcggg ataaagctct tggctatacg
     8761 atgattggag ctcaaaaagc cgatttccgt tttaaagcga acggcttacc ggtggaagat
     8821 gtgctttccc gtgggcaatt aaagctattg atgtgtgcgt taagactggc tcaaggcgaa
     8881 catttggtcg cccaaaaaca acgccaatgc ctatttttaa ttgacgattt tgcctccgaa
     8941 ctcgacccaa ccaaacgtga gcttttagca catcgtttaa gagaaagtgg ctcacaagta
     9001 ttcgttaccg ccattactca agatcagctc aatcaaatgc aatggcaaga cagaagcgat
     9061 gattgtttgt ttacggtaaa aaatggagaa attcagccac agtaagcggt cagatttggg
     9121 ggcaatttta caaaaatgtt tcttccgatg gcgcgagcgt ccacgctcgt gccaaaacaa
     9181 gcggataatt ttgcataaaa atttgcaaaa aacagctctt tattaaccgc ttgtagaata
     9241 ttaaatagca ctagcgtgga cgctagtgct atcagagcaa aacctcaacc tacctttact
     9301 ttcttgaatc gtgagcctgt tggagcaata ctctactctc tttcaagaac tgctcggaat
     9361 aatcgccaaa ccagtgatgc acttcctcaa aagccttgat aaaaccggct ttgtcgttgc
     9421 gtttaaagaa atctagccct tgttcaaaac tctcttttaa ggtttcgatg gtggctaaat
     9481 tttccggttt atcggcaata atatcggcat ataagctgcc gtcttgggca aataaacgcc
     9541 caatcattgc caactctaag cggtaaatcg gcgaagatag tgccaataat tgagagagtt
     9601 gcaccggctg gcgagaaaga tgtagcccga atgcaaaagt ggaaaagtgg cgtagggctt
     9661 gaatgtaggt cattgcatta tcgtgtgctg ctgcctcaat ctcttcaatt tttgcccccc
     9721 aaattttgat ttgctcaagc aaccattgat aacgttcagg gaaacgcccg tggcagcaag
     9781 cgaccacttg ctttgcctga cttgcaatat ccggtccgaa catcgggtgt aaaccgacta
     9841 ccgctccatt atgcacttcc agcatttttt gcaacggctg atgtttgacg gaggttaaat
     9901 ccgccaaaat catattttcg gttaaataag attgtaaacg ctcgatggtt gctagggtgt
     9961 tggcaatcgg cacacacaca ataaccacat ctgcattggc taaaatctgc tcggcattgt
    10021 cccaatcatc acgtcctaat gcctcaacat tatagccgga tagggttaaa taattgccaa
    10081 acagcccacc taatttccct ttaccaccaa caatcacgat tttttgaatg tccgaattaa
    10141 ctcttttgaa gccgtgtttg ttttcattgg cataagattc acgcattata cggcgtagca
    10201 catcttcaat gagatccgcc ggaatacctt gtttttccgc ttcagagcgg cgggcggaaa
    10261 tcattgcggt ttctcgctcc ggagcataaa caggaatgcc gtgttctgat ttgactttcc
    10321 caacttctgc cacaagagct aagcgttcag aaagtaaggc gataagttgt tgatcaactt
    10381 gatcaatttg ttctcgtaat ggggctaatg ggttcatatt tgttaccaat ttacaagcgg
    10441 tcgtttttat gcaatttttt gcaaattatc tttaacgcaa cttttcagca aagtgagtta
    10501 aaagctcttc tgtagtttgc cagtcaatac aagcatccgt aatagaaaca ccgtatttca
    10561 tctgctcgaa cggcaattct gatgattgat tacctgcgtg taaattgctt tcaatcatta
    10621 aaccgataat cgaagtattg ccagcaagta gctgctctaa tacattttct gccaccagcg
    10681 gttggcggcg gtaatcttta ttggaattgc cgtggctgca atcaatcata atcgctgtag
    10741 gtaagtttgc ttgttttagc acccattcac aatcatcaac atattgcttt tcataatttg
    10801 gggttttacc gccacgtaaa ataatatgtc cgtctgcatt accttttgtt ttgagtaaag
    10861 taacttgccc ctgttggtta atgccgataa agctatggct ttgagcggaa gattgcatcg
    10921 cattaagtgc aacggctaaa tcaccatctg taccattttt aaagcctacc gccattgaca
    10981 aacctgaggc taattcacgg tgagtttgag actcagttgt tcttgctcca attgccgacc
    11041 agctgaacaa atccgctaaa tattgtggtg tcatcggatc taaggcttcg gtcgctaacg
    11101 gcaagccaag ttcggctaaa tccaaacaga gttttcgtgc gatacgtaag ccggtttcga
    11161 catcaaaaga gccgtccatt ttcggatcgt taatcagccc tttccaacct acagtagtgc
    11221 ggggcttttc aaaataaacc cgcatcacaa tatacaactt atcactcact tgctccgaaa
    11281 gagcttttaa ttttttacca tattcaaggg cagcaactgg gtcgtgaatc gaacaaggtc
    11341 caatcacaat cagttggcgt ttatctcgtc tgtgaataat atcggaaatc gttttgcgtg
    11401 aacgttcaat ttgattgcgt aaatgttccg gcaacggaaa ttcttgtttt aactcttgtg
    11461 gggtcagtaa taccttttca tcttggatat ttacgttatg cacgctatct tgattaaaca
    11521 ctgtgttcat tttaatttcc ttttgtgtaa atcttttaat acacaaactt tacaacgtaa
    11581 tttttaaagt ttcaactact ttttgtttca cactctccac cgtgattttt tccatccaat
    11641 ttttgccttt agctttagtt gcccaagcta attgctgcca aggtttacca taagattgca
    11701 aaatcgcttc atcatatacc gaaaccactt tgtctaagtc attgtaaggg cctgtccgtc
    11761 ttggattatg aatcgcatac aacccaatca ccggcgtatt ttgcgtagtg gcgatatggg
    11821 caggacctga atctgaagag atcaccaaat caacctgacg aataacacct gcaagctgtt
    11881 ttagcgtggt tttaccggca atactcgtac aattcggggc aagttgttga attttggctg
    11941 cggtttccat ttcatattgc gatggagaac ctgcaattaa tacattgata ttttgcttac
    12001 ttagccagtt agcaatttct gcatagcgtt ccggcaacca atctttctct ttcttgcttg
    12061 aacaaggagc aatgagtata tttttccttg taaaatcaat aaattgtttg ccataagcta
    12121 aatcttcatc actcacaggt aaattccatt gtgccgataa atccattatc ccaatggctt
    12181 tggcaaacat catttgcccg tcaagcacgt gaggagagtc tgtcatttct actttctggt
    12241 tggtaaacaa ccattgcatt tcccttgctc tgtcttgatt aaagccgatt tttttctttg
    12301 ctttaatccc aagcgataga attgaagctc ggaatgccgt ttgtaaattt aataaaaaat
    12361 caaaccgctt gtgagaaagt ttttgccaaa gtgtaaagat acctttccac cctatttttt
    12421 tatcataagg aattaagtga acattcggaa tatctttcat taaatacgct tccgttttgc
    12481 cgataatcca agtaatttca gcactaggat attttcgttg aatagcttga ataaccgcta
    12541 aggtatggca aacgtcgcca atggcagaaa ggcggagaat acagatagaa agaagtttat
    12601 tgtgcataat aatatcaata gttcagatta cattaagcta tattaagaca gaaaaaaagc
    12661 cacataaagt gttttatgtg gcttttgcgt taatcgttta gattattcaa ctcttaagat
    12721 acgacaagta tttgtaccgc cagcttttaa ttcatctccg tgagttaaaa gcactaattc
    12781 gccggttaat aaatagcctt gttcttttaa ttgagcaatg gcttttttcg ccccttccat
    12841 tgtgcggctg tcttcattgt aatataccgg tgttacacca cgatataacg cacaaaggtt
    12901 taatgctttt tggttacgag acatcgcata aatcggtaaa cctgagctga tacggctggt
    12961 taatttagcc gtttcgcctg aatgagttaa tgaaataatt gccgatacac cttctaaatg
    13021 gtttgcggtg tacattgcag acattgccac agcttcttcg atagatttaa acgtaccttc
    13081 catacggtgg cgagaaatgt taatgcttgg cattgtttca gcacctaagc acacttctgc
    13141 cattgatttt accgtttcaa cagggtagtc accgtttgca gtttcgccgg aaagcattac
    13201 cgcatcagta ccatctaaca cagcatttgc aacatccatc acttcagcac gggtcggcat
    13261 tggtttttta atcatcgatt ccatcatttg ggttgcggta attaccacac gatttagctt
    13321 acgagcacgg cggattaaac gtttttgcac acccactaaa gccgcatcac caatttcaac
    13381 ccctaagtca ccacgagcaa ccatcacaac gtccgcacct aaaatgatgt cgtccattgc
    13441 ttcttcagtc gcaacagttt cggcacgttc aaccttcgct acaattttcg cttctaagcc
    13501 tgcttctttt gctaattcac gtgcataatg taaatctgca cttgattgag ggaatgaaac
    13561 cgctaggtaa tccacaccga ttttcgccgc taatttaatg tcttctttat ctttgtcggt
    13621 taatgcagga gctgataaac caccacctaa tttgttaatc cctttattgt ttgataacgg
    13681 gccaccaact gtcacttcag tatgaacttt aacgccttcc acttccaaca ctttcagttg
    13741 aacattaccg tcatctaaca atagaatatc accaggtact acatcatttg gtaagttttt
    13801 gtaatctaaa cctacagctt cttgatggcc ttctccacgc ggtaaatctg cgtctaaggt
    13861 gaatttatca ccaatattta agaaaatttt accgtcttta aatgtcgaaa cacgaatttt
    13921 aggaccttgc aaatcgccta aaatcgcaac gtggcgacct aatcttgcag caatttcacg
    13981 cactttattc gcacgttcga tgtgatcttc aggaataccg tgagagaaat tcatacgaac
    14041 catatttgca ccggcagcaa tgattttttc caacgtattg ccacgatctg ttgcaggtcc
    14101 cattgtacaa acgatcttcg ttcttctgag ttttctagac attatttgac tccatcaata
    14161 aatttaaaaa ttaagttaaa atctttctaa gcatcttgat tatgcgttaa acgagggtca
    14221 ttatacgcct aaatcaagag agtttaaata caactaaagg agaatgttat gaatatttgg
    14281 attatgcgcc atggggaagc aggctttaat gcttcgagtg atgctgctcg ctgtttaacc
    14341 gacaatggta taaaaaacac catttcacag ggaaaatggt taggagaaca tttagccaac
    14401 caacaaattc aattagataa aattctcgtc agcccatacc ttagggcgca acaaacgctt
    14461 gaaaatgtgc ttattggtat gcaagcggtc aattttcccc aacattttac caacctcatt
    14521 gaaagttggg acgaggttac gcctgacgga aacccgcata cagtagaaag ctatctacat
    14581 tttttaagag aggaaggcgc aaaaaatatt cttctgattt cacatctccc acttgtgttc
    14641 gatctcgtcc aaattttaac gaataaccaa agcaatgtac aatttccaac ttcaaccata
    14701 gcagaaatta attgggtaaa gacaaaagct gagctaattc gagtaaagca tacttaattc
    14761 tttcattttt agaatgtcaa tataaaaatt ttcaattttt ttataaattg tcgaatttat
    14821 agacttccaa aatacctaaa aaatgcgtat cataccagcc ctcaaatcag tactaaactg
    14881 atccataagc tattataaga aagtacggta tttaccgtac tttttatttg gatatccctc
    14941 tggttaaaat tacttcaaat ttgttaataa aaggttaaaa atgcaaatag gacaatatgc
    15001 aatcaaaaat cgtattttcc ttgcacctat ggctggaatc acagatcagc cttttcgccg
    15061 cttatgtagc caacttggag caggtttaac attttcagag atgatgtcta ccaatcctga
    15121 tgtatggcat actgagaaat cacgattgcg gttagcacac cacgatgaaa taggcttaaa
    15181 tgccgtacaa attgcaggtt ctgatcctgt tgaaatggca aaggctgcaa agataaatgt
    15241 tgagtatggt gccgatatta ttgatattaa tatgggttgc ccggcaaaaa aggtgaataa
    15301 aaatatggca ggctctgctc ttttacgtaa ccccaaatta gtcgctcaaa tattagattc
    15361 tgtagtcaat gccgttgatg tccctgtgac actaaaaatt agaacaggtt gggatcagga
    15421 aaatagaaat tgtctgcaaa ttgcgaaaat tgcagaacaa gccggcataa aagctctcac
    15481 tattcacggg cgtactcgaa gctgtttatt taatggcgaa gctgaatatg aaagtattaa
    15541 ggcagtaaaa gaagcaattt ctatcccagt gatagcaaac ggagacattg actctgcgga
    15601 aaaagcaaag tttgttctcg actataccaa agccgatgca atcatgattg ggcgcgctag
    15661 ctttggaaat ccttggatat ttaaggaaat taatgatttt tttgaaactg gattatcttc
    15721 accattatca attgataaaa aataccaatt aatgtttaaa catattgagg atttgcacca
    15781 attttatggt gaagaaaaag gttatcgtat tgcacgaaaa catgttggtt ggtataccga
    15841 aaaattaaat ccggaatcaa attttaaacg cacttttaat acactaagtt ccacaaaaga
    15901 gcaactttat gcattagaag attttgttaa atcgattcat ttagaatctc aattaagaaa
    15961 agttggataa aaaaatgtta gagcaacaac ctacacaaaa cccattaaca gtaacaatgt
    16021 taaatgcaca agcgcagcag gttaataaac cacttcgcga taatgtgaaa gcagcattaa
    16081 aaaactattt atctcaatta aatggtgaag atccaacaga attatacgaa ttagtattat
    16141 ctgaaatcga acacccaatg ttagatatgg tgatgcaata tactcgcggc aatcaaactc
    16201 gtgcagcaac aatgctaggc attaaccgtg gcacattacg caaaaaatta aaaaaatacg
    16261 gtatgggtta atctaaccga ccgttaaaac acgattttaa ttcgtatgta attagttaga
    16321 gccaacaaaa aacgctgaat atactattca gcgtttttct attttatttt gccgtctaaa
    16381 acttcatttc aaatgctaaa ctgaaatttc tccccggagc ggcaaatcga gtgtaattgc
    16441 taccccggtc ttggtttact gcattcacac cggattggcg cactgattcc caagtggaat
    16501 atttacgatt agtcacatta taaattcctc cacgtaaggt gtagttttta taattgatgt
    16561 aaccggtaat atcatgggtg taccaagaac cggtcagttt gccacctaaa tcaacgcgat
    16621 gtatgccgtg atgacgtgtg cctgccacct catcggcgtt tttggcttta gaataggtgg
    16681 tagtaatgcc aattccccat ttttcttctg ggtgatcgta gccgaatcca agcacatagc
    16741 gtgctggctg aatcgcatct agaataggat cgtttacgct atcgagtctt gagtcggtta
    16801 gtttccgctc ttttactttt acacggttat aagcaactga tgaataaaaa ccatctggca
    16861 gcatagataa aataccgtgt aagtcaaatt tagcgactaa atttatcccg tttagtgcta
    16921 catcttgaat attatggtag ttatagaaac agtgtgattt ttgtattatt cttttacatg
    16981 ctgtcgcaat catattttta tagttattac ggaaatagct cacatcaagg taaccaaatt
    17041 gacctttaaa gctaactcca atctcatgat tagtcgattt ttctggctct aactggtggc
    17101 tacgttgcgc gcgttgcaca tattcgttat ctttaagccc aatatgatca cgtttaccat
    17161 aaagttcata gaatgcaggc actctaaaac cgtttgaaat gcgataagaa agcgatacaa
    17221 actctgttgg tttaagcgta atcccaccat tccaagacca atttcgataa gttcggctaa
    17281 gtgtccacgg atcatcagat ttaaatcgat gttgatcaaa acgcacccct aatcccaaat
    17341 ccacatactc gcttatcact agatcgcgga agctaacaaa atggctatcg cctttaattt
    17401 tacgcggttc acagtttaag atgtcgccgc gtgtattatt acacaaagat accgtttcaa
    17461 tactgcgtgg atcgcggcga taaatatatg gattatctaa acgccctcta ccgcggtagc
    17521 tggtataacc gcctttggta tattgggcag tcatatcccc atgatccata agcgaattaa
    17581 atcgatcaaa gcccaaccct aaattcagtt tgtgggtttg cttaaatacg ccttgaccag
    17641 catttagcgc tttatcaaat tctaaatgaa tgacacgatg cttttcttgg taattattac
    17701 gctcagttcg atacatagac caagatttat ccaaagtcgg gcggcaattt ttatctacca
    17761 caggataatc gctacaatgc aagcgatgta gccggctata tagttcaata tcttgtttat
    17821 ccgcactgag tttaatgcta tccaaccagc gattattctc tggtttatat ttataggtga
    17881 atcctaaacg acgtttgtgg tgacgttcat caaaaaactt cacatggcta tagcgcaacc
    17941 cataagggat ccttggcttg aacactaagc catctaaaat attatcccct tcataaacat
    18001 agttcctaag tgataagtta atatcgtctt ttgtatagta agctggcgtt tgcatatcac
    18061 ggatatcgta gcgttgtttt gtatcttcta agattgcgcc aagataatga gacgagttaa
    18121 agtgatagcc aaacttcata aaaacagaat tactcttgta atctaaaggg tttggtgcaa
    18181 tgcgatcttt accggtatat tcttgggctg agagctgctc agtgcgataa ggaatctgct
    18241 caagctgttt gcgctcttca ggcgtatatt ccggaaatgt tctcactggg aaattatcgc
    18301 ggttcaactt aacccttgca cgaggagtac aatctaatgt tgggcaagta tcttccacaa
    18361 taaaaaaaga tcctccagga gcattctgtg cggaatttgg gtaaagatcg tagcgatttt
    18421 caaagccggt tatacgccga atattatgtt ttaatttatt tgcctcggaa tgaattttgg
    18481 tctctttacc gtgtcggtga gttgcaataa caagtgcttc aaaaccaccc gcctcaccag
    18541 ccgctgcgat agactgtaaa aaatggctat ttttgctggc ataagaggtc ttactatcta
    18601 agccccaatg ctgcccctct ttaataatat cctgcgcatc tttagtacga aaaccaatag
    18661 caccacctag cgcaccagag ccatattccg cagaacttgc tcctttgctt aactcaattg
    18721 aacgaatgtt ttcatactca atctcattaa ttgcaccacc attagcatct gaacctagcg
    18781 tatgataatg ctgcgcttgt ggtagcccat caacaagtaa gctgacacgg tttttatcta
    18841 cacctcgaat ggcatagcca ctacttgcac cgcgaccttg ttccaccacc gaaataccag
    18901 ggtcatagcg agttaaatca cgaataccaa gaatttgatt tttactcatt tcgtgataat
    18961 ttttcactac tttccccaag ccagttactt cgttttgacg ttcgtgagca taatggctct
    19021 ctgtcacaat aacttcatcc agaacagcta gatcgttatt ttcttctatt tttttatttt
    19081 cagtcgcagc accgtatgaa tgagaaagag caaataacac tgttaaggca acaggtgaat
    19141 agcgaaaatg atgatatttc attatcatta gatagggtct cctttattta aattttgcaa
    19201 atttttataa aaaattgccc gcttgctatc tacaaccagc aaaggggaat tatgattatt
    19261 tttctatttg acgttttccg ccgaatgtaa tactgactct atctttatcc gtttctgcac
    19321 tatgtacaat accacctaat tccgtcgcct tagggccata aaagccccct tcaaattgag
    19381 tatttatatg cactaccgtg ccaccattcg tacttttcgg atcaagatta aaaccagaat
    19441 tgcccgtttt ggctgtgcct gcaaaaccat tccctttcag attgccttca agtgtcagca
    19501 ttgggcgttc ttcaacacca tcattagcaa tcagcttgcc attaattttt ttattgacaa
    19561 aatctacatc gaatagtgaa cgagtaccac tttcgctgtt acttggcgat tcagcccctg
    19621 ccgagccaga tttactgtac attaccccgt cccaagtacc tcgatatttt actgtccctg
    19681 ttggcaaatc tgccacagct gtacgttctc ctactaaata ttggtgagca gtatcactat
    19741 tatttccctc gctataagtc ccaaatttga cataatctaa attattacag cagactgaaa
    19801 ctcgatacgt tttatcatca atagtacggg taaccaaatc atcaaatttc atctcggcaa
    19861 agcttttttt gccttccgca ataagtggaa tctgcttatt gttaataatc aaatgtgtcg
    19921 cattcccgaa agtatccatc tcagatttat ttaaatcttt aagtttaatt ttgaaagcat
    19981 caaaggcaga ttcactatca tcttttttag catctcgttt gccagcaaaa acaacaaata
    20041 ccgacttatc atcagctaag aatttaccgg caagttcttg agccttccca ccaaaaaatc
    20101 caccttcaag tgtcgtagag cttttaccaa aataaggatc atcggtattt tttgcgtttg
    20161 ctttaccaga aaagcgatta cctttaattt ttgcatcaat atcgtaaatt gttgtaattt
    20221 tttgctcttt gctacgacta acatacccat tacgaaccaa tgttccagtt aaagttttat
    20281 tagcaaaatc agccgtaaat tctcctgtat gccccattgg tttttcagaa tcatcaacat
    20341 taatatcgta actattttcc ggtgtggcgc caatattgat gcctgcggaa ttagaaaaat
    20401 atttactatc tctccctttt ctcgcatcgg tagtaaaatc ccaatatcct ttataagtag
    20461 ctttttgagt aggtattgct tttgccggct ctatacctaa atagtaaaca tacccatgtg
    20521 cacctgttct caaaatttct ttaggcttta tttcaggttt tgcaccagaa tgcagaacat
    20581 agccagaacg aacaaaatta aaatctctag tatacaactt atgatttcta tcatgagtat
    20641 ggctaaatcc atcagcacta ctaccgtacg ctttaacctc ttcttcatac ggaatttttg
    20701 tcagatctcc agtaatctct tttatatcac caataggggc tacatcttcc ttcccctgcg
    20761 gaaagagatt acgacgcgga attttggctg aaaaaccaaa ccccggctgc aataaagctt
    20821 cagtttcaga agcgcttact gtacgtcttg cgttactatt atcatcttgt aaacttggct
    20881 ttttgggggt agtttgcgtt tgagattcaa ctttggcaga ttgaacatca aagcttccac
    20941 catttgagga acaagcagca agtagcgccg cattaagcag tacaaaacta cttttaagtt
    21001 taaacataat gtctcctttt aatttataaa atgataa
//
LOCUS       DANLTI010000033        20882 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.033, whole genome shotgun sequence.
ACCESSION   DANLTI010000033 DANLTI010000000
VERSION     DANLTI010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20882
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.033"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(60..9704)
                     /locus_tag="PXB09_000956"
     CDS             complement(60..9704)
                     /locus_tag="PXB09_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDL5233092.1"
                     /translation="MNKHCFRTIFSKTLQRIVVVSELAKLAGKSESESMTSGAILQKI
                     CKIRPLAFSLFCALGFVTLSDNAMAETLIIQADSTAPKNQQPIILQTANGLPQINIQT
                     PNDKGLSHNKYSQFDVAEKGAILNNSRTNTATQQAGMVQGNPYLARGEAKVILNEVNS
                     SKPSVMKGYVEVAGKKAEVIIANPSGLHCDGCGIINADRATLTTGKPQINQGNLEGFV
                     VEKGKVTVAGKGLDNSRVDYTDILAREAKINAGVWSKKETKVITGKNTVKRSNSDNNL
                     QIIHTNQPLAGEEKPTVAIDVGELGGMYAGKIHLIGTEQGVGVRNAGHIGASADTLTI
                     DSQGRIVNSGTFNAQRQVQLNAQHGIDNQGKIENKQGNIQLNSKADIQNSGSIVARGG
                     NIQKKAETKIQQSGETVAKGNITYTARQIHADKNSLIAAGVDVTDTAQGEVRKLEAQS
                     VAGKTIQLTAPEKTTVQGKNIASGKINVAAAEIDANQSQNNAHTVEYSAKSGDIQANS
                     AQFSANQIKLTTPKWLSTEGSQLTAEVIEAQQANLNARGSVWKQTGEQDFRLKAESIH
                     TDSARFSVGGHFEIDGNRLTNNQGLLSSGKRLGLNLNDAVDSVDGKLVAKGELSIRAP
                     LLNNQQGLILSGEKQAITVNTLKNQSGVITSQTEQTLDITSELQNQGGRISASGVAIN
                     AQSLDNREQGEISSVKELALTVSQQVDNRHGVIQSVGNLTLNSTLLDNQGGVLKSATD
                     ITLNVPTVLNNRISENGSLIEAGGSLTMNSFEVENQGTLARQPQPIQGIIASQFVLNS
                     TKQLNNEKGGIYIGSSARFTLSDSLNNRNGEILSWGDLAIFGGKSLTMTNTEGKVSAN
                     NGLEITAKALSGDGDVQAGDIRLNLQENFDITKDINANRSMIIQTEGDILNRKKLAAN
                     DRLQLTANQITNAQNARISSADTRLTATSTVYNEGLINSRSDNDNAQTVIKAQEIHNI
                     GTGNIYGDKVALGAERILNQDKDGTSATIAARQSLGLAAKVIENNTLVYEANKKSGSL
                     IYSGGEIAIGRQLNEQDTVIGNAGQLHNRSSIIEAEGRIQLNADKVANVNSHYRSELE
                     TTDRQTVNEHFILPRDKHNRGGSDVYDNGHLPTINVNQLRKGYYRKTWSYWQKYDEAN
                     LPVITDISQLNATTVLAKPYAQSCANDESVDCTLLPAGNYKKDNPVWTWFNLTPPAED
                     APEMTPEIIQAMNEEDLANQHLSEAEQEKLQKEQGQGIAPVVPARPIEPVRGSTETEA
                     QYQKRLQTYQAELKAYEAAEAAYQRYVLLKPLIDWEAKYGANIQALDEAIAKHNKANL
                     SQEYPHFWNLWIKERMVKENITKASLPAQILAGGDLTYQSDEFINDKSWVIAGKALNP
                     IGRSRIANLDDADAVRQDWELGRRQFSFTEYHGGTRRRHSRYDENDGPLARLKEVHKD
                     MNIFVELENTSPTAYTDYVDAKAANAVKPEGNQVERGNLPDAPNPPTMAIERIPSPNA
                     AAFEVRSMTVDTRLPNQGLYRINPQADSHVLIETDPDFTDKKRWLSSDYMFNALRHDH
                     NNVHKRLGDGFYEQRLIREQINRLTGRQFLGDYTDFDSQYKALMDAGITFAQKFNLRL
                     GITLSPEQVASLTSDIVWFETQTVRLPSGETVSVLVPKVYVLARKGDIDGKGSLISAD
                     ALTINSKEIVNQGTIAGRRLAQFNAERLENSGTLSGGVLAAKVSGDLENIGGKIEADK
                     AILLDIAGNFNHTSTTRTTQIDLDGFKRAETNLDRKALLHVKDENGLLQVQAGNITSA
                     GADIINDGQGQTYLSAKNQLNLTALQVGFDEKMGGGNHYRNEALNDVVISRVQGKGDV
                     VVSGKNLYSEGADLDAKARLALLAENDMVLGSATRSRDYEEYHKTKSGGALAKKTKTT
                     YDNISETEHKGTELTGEDILVKAGHDIQGESLLAVSRSGDIDIIGGNNVTLSSATNQL
                     SEQHIRETKRSGFLNGGEIGFTIGSQKTRQENSLEGAIQSTARNTLGSEGGNIRIQAG
                     NKASVSNVDVLISNEKTAVISGKNGVRVESGKDVINSTDNYEFSQSGLSIALSTPVTD
                     AVQSARQSVQKAKATQNEKLKGVYAVKAAEDAVIAAQNAQKVAETLGNLGNALTENHA
                     AAENPAVKISVSLGTQKQQRESRSQSVTHSKSTLNGGNIALISGAGKVALEGVDTRVK
                     DTLLLDGKLGIESKGVADTYQNNTKNKNHSASVGVFIGLDRDSFGIGFEAGVSGGKGK
                     ENIETETWQNNQLQAGKIVTNSANGKLMLDATNVKANHWEGEVQDFEARSRQDISKYK
                     SEYTEGSVHGTLAVGTTGVNGHVAYNGAKLNTAQVENQTAIDIGKSGMDVKVKKNAHF
                     EGAVMTSQAEKENNRFQAGTLTTGDIENHSELKTRSVAISGGTSGVNPMSALSLLGNK
                     NESERSTTKAAIGENIAITLTEDLNAETTLNHLNRDTQNANQKVTKYDISEVKETQEL
                     VKGIGEIAEKAYQIYTHSEREKVTEAKLELGKAQAQKASKEEIGKLEANLDRLQKEFD
                     KNYGTGSKTKRAVEAVTAALQGLAAKDVGQAAVGLASPYLNAEIKKYTEGDTQANLIA
                     HALLGAVEAAATGNNVLAGAAAGAGSEAAADFIVKTLYKGKSTQDLTEAEKQNVALLS
                     QLASGLASGLIGDSTQSAAVGADIGKRAVENNYLSNWQEQKRSQELKSCHGDARCENQ
                     VRLYWGLVDIGQDVSFVSGAVAGVPENLAESVEGLISMFSSPIETIVAMKELIAREDT
                     LSYIANMTKQEYLAKLDKMQVYYEQAGAVGSFNAGKEFGNMMTDVVTALTGAGALVKT
                     GVGTTAKIVTKSGKELAIPKTRSSASLGTCSFHGDMEVKTDKGYRQISSIKVGDKVLA
                     KNERTGITTYQKVQAHYSNPYDYTVYVEVADSKGKYHTIVSNKIHPFFTQVLSGRVPI
                     SSEGHSYNGEIAKAQWVDAQHLQKGYRLLAESGEWQTVTKVKIKQERLKAYNMTVEKD
                     HTYFIRGTNADNEGVWVHNDCWHALPNDAKQVKNIDGYKAYQFTDPKDGKVVTVVQKD
                     LNRFETPNHQAGVDPHFNRLSQQIDAETGRYLSTDNPVDGLYNRAYLRSETLQKIYAN
                     YEKLPNGNYRNKLTRQEIEQPIDIGHMYGWEHRRLSLAAKELNWSQKQFNDYVNARPE
                     NFRLENMSENRSHKNEMPGKHDIQRIKSDMEKFLKEGK"
     gene            complement(9756..11531)
                     /locus_tag="PXB09_000957"
     CDS             complement(9756..11531)
                     /locus_tag="PXB09_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL5233093.1"
                     /translation="MKTPQNLILSTVLLSASFVAEANSSSLVQQARIDATQQQIDAAQ
                     QHRQQQYQQNQAEKFQPKADVRLETQINDTLTLSNHELPCYPIHQITLIDYSPDNSLT
                     TSQFQWAFEKAVKSFHLTLPHCFGGEGLAVLMKQIQNEIIGKGYVTTRVVTAEQDLRG
                     GKLVLTVIPGKIRNTLVVDSGKVPRFTKLHALTGFTFAEGDILNVRDIEQSLENLKRV
                     PTAEANIEILPSSSEKAEVGDSDLKISYSQAFPFRLNLGLDDAGSKSTGKLQTSATLS
                     IDNIFSANDLFYTSFTHSMKQKGDDNGRRASKNLTLYYSVPFGYWQLAFSHTHHRYHQ
                     EVFGAFDKSYLYAGESDTDKLTFSYLLYRDAKRKTSLSGSLWPRQSQNYIDGSEIEVQ
                     KRRMAGWEAGFSHKEYFPTATLELSANFKRGTAARGALSAPEEDYGEGTSRPKIITAS
                     ASLTKPFFWGKQPWQWQSSLNAQWNKTPLVPQDRFSIGGRYTIRGFDGELTLSGERGW
                     NWRNELSWQFNPNHAFYWAVDGGRVSGWATENQLGHHLMGTAIGFRGGVKGFSYDVFA
                     GRPMRKPEGFKTSDTVAGFNIGYNF"
     gene            11686..12771
                     /gene="queA"
                     /locus_tag="PXB09_000958"
     CDS             11686..12771
                     /gene="queA"
                     /locus_tag="PXB09_000958"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDL5233094.1"
                     /translation="MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGEFADQQFV
                     DLYDHINEGDLLIFNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKASKAPK
                     EGAELIFGEDKLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYIDR
                     PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQ
                     PVRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKD
                     GKLIAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHA
                     VETKYRFFSYGDAMFINKNPNALSDVP"
     gene            complement(12798..13336)
                     /locus_tag="PXB09_000959"
                     /pseudo
     CDS             complement(12798..13336)
                     /locus_tag="PXB09_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13349..15631)
                     /locus_tag="PXB09_000960"
     CDS             complement(13349..15631)
                     /locus_tag="PXB09_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDL5233095.1"
                     /translation="MTLDRFCIALILFHLPILWLPKAFLFVGIVIGTLVLILSVYLRS
                     KLTAVLGLLVCIGYIQIIQVAKNAEKTTASKTPVQFEISKILKQTDYQTAIATLNTGE
                     KIYLNWQSKQPLLLNQFYQAELALRPISARSNIGNFDRQRWYFANHINMTATVRKVET
                     LAKTDYSLRTNWLNKVKAETDALPTQGFLLALAFGERAWLKTEHWGQFQQTATAHLIA
                     ISGLHIGLAMLFGVYFAKGVQWLCLKSELTALQAVGFSLYFARIVSFITAFGYSYLAG
                     FAVPTARALLAIAFVLLCQVLRRHYTPWQYWGRIVALLILIDPLSLLSDSFWLSILAV
                     ASLILWYQYFPLSRFLNDEYRKKITKFNRLWLSLLHLQIGIWLIFSPVQLYFFEGISA
                     FALLANLIIVPLYSFLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLDPFSNAWFAL
                     SHWQQWQLLSLNLLVLVLLYCKLYRLSYKKWLSAVAVSLLFNLSFYLPKLFNQTQTEW
                     IMFDVGQGLAMAFIYQQNKAVIYDTGSSWQANDGSRNSMAKMEILPYLKRNGIEVEAI
                     FLSHDDNDHSGGVVELLQAYPKARLISSSKVTYHNINPEPCIAGTSWQFGEWQLLAIY
                     PSHIAERAKNQDSCVILAKNDRLKILLTGDSGVEQERQFAHQLGKIDFLQVGHHGSKS
                     STGETLLSITQPAFAVISAGRWNPWKLPNKQIIERLNRRHINVLNTVETGMIRVKFYP
                     SSIEIEQARGAFSPWYKQFY"
     gene            complement(15773..16987)
                     /gene="sstT"
                     /locus_tag="PXB09_000961"
     CDS             complement(15773..16987)
                     /gene="sstT"
                     /locus_tag="PXB09_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDL5233096.1"
                     /translation="MSQSLSSKILGGNLVLRIAIGLVLGVLLAFINKEWATSVGVLGQ
                     FFVKSLRAIAPILVFVLVLAAIANKEVGSDSKLKPILVLYVLGTFFAALTAVVLSFMF
                     PTTLELTASPDGLTPPQGIGEILKTVIFNLVDNPLVALSNANFIGILAWSIGLGIAFR
                     HGSASSKAFLNDLANAVSFVVKVVIAFAPIGVFGLVAETVAINGIDAFEDYARLLVVL
                     VGAMLFVALVLNPLLVYWKIRRNPYPLTFTCLRESGVTAFFTRSSAANIPVNMNLAKR
                     LGVRDEIASVAIPLGASINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSVVASICA
                     CGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFVIGVIQDSVETALNSSTDVLFT
                     AAVSYAEDQKSA"
     gene            17242..17604
                     /locus_tag="PXB09_000962"
     CDS             17242..17604
                     /locus_tag="PXB09_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDL5233097.1"
                     /translation="MKPTNKADFQRVINAAGYSMKGLKAAYINEAAFRQEIWCATILF
                     PLGLILGETNIEKALLVGTVLLVLVTELLNSAVESVVDRIGADFHELSGRAKDIGSAA
                     VFMAMVLLAITWILILFC"
     gene            17641..19284
                     /locus_tag="PXB09_000963"
     CDS             17641..19284
                     /locus_tag="PXB09_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDL5233098.1"
                     /translation="MRLKKTLLSVALLSATSAMAYETGKTYRFTVLHTNDIHGHFWQS
                     DKGEYGLAAQKTLVDNIRKEVAEKGGSVLMLNAGDANTGVPESDMQNARPDIEGMNAI
                     GYDAMVLGNHEFDYPLQILSMQEKWAKFPFISANVINKKTDKPIVKPYVMLERGGLKI
                     AVIGLTTEDTAKLGNPDVTENAFFKNPIETAKNTLAEINQKEKPDVRIALTHMGYYFD
                     GKHGTNAPGDVTMARTLEKGAFDLIIGGHTHDTVCIDEKGQFKAKYTPGEECKPDFQN
                     GTWIVQAGEWGKFVGRADFEFKDGKATLVKYELIPVNLKKTIKKEDGTKEYRLYQPEI
                     KADEATYTLLKKYQDEGDKKLNIEVGRVKGLLDGKREHIRFQQTNLGRLIAQSQMERV
                     KADIGIMNSGGIRTSLEEGVITYKHILTVQPFGNMIATVDLKGQELLDTLTTIALKEV
                     DTGAYPQFAGISMVVDRTAKTISDVKIGGKPFDKEKTYKVSLPDYVAAGGDGYPLLKK
                     HPSYVNTGFIDAEMLKKFFEENKIIEADKYDPKNQIIFK"
     gene            complement(19491..20360)
                     /locus_tag="PXB09_000964"
     CDS             complement(19491..20360)
                     /locus_tag="PXB09_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5233099.1"
                     /translation="MSSRGKILNTISSLQNSLTKTEKKIAAAILSQPELLSQCSLSEV
                     AKQLDVGEATFIRFCRTLGFKGYTDFKLELAIELATQNQDNRVLLDTDVSESDTSKDI
                     AEKLKVSLDNVIEETINLLDFNVLEKVVEELRKAKRIFLFGVGSSGLTAEDAKHKLMR
                     IGLQTDAVTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITH
                     NLRSPVTEEANYVLINGNRQGHMQGDSIGTKMSQLFVLDLIYTLLVKAEPENALKQKQ
                     KTLNVILEQRVKG"
     gene            complement(20370..20834)
                     /locus_tag="PXB09_000965"
     CDS             complement(20370..20834)
                     /locus_tag="PXB09_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5233100.1"
                     /translation="MILADLSRDDYLKSLPPVFARLCKKLKSLDLVNLELGWQELENG
                     IRMNVMSFETTPAEGKKAELHRKFIDIQLLIDGEEMIEYGLSQPDLSKYDEYRDEDDY
                     QLTAEIDDKNNLILKPNMFAIFLPYEPHKPGNSVNGNKTLKKLVVKVPVELI"
BASE COUNT         5618 a         4740 c         4075 g         6449 t
ORIGIN      
        1 ctgcaatggc aactagcatt gagggttcat ctttatattt ttcatataat tcattcatat
       61 tatttacctt cttttaagaa tttttccata tcggatttga ttcgttgaat atcatgtttt
      121 cctggcatct cattcttatg gctacgattt tcagacatat tttctaatct gaaattctcc
      181 ggtctcgcat taacataatc attaaattgt ttttgactcc aatttaattc ttttgccgct
      241 aatgataatc ggcgatgttc ccagccatac atatgaccta tatcaatagg ctgttcaatt
      301 tcttgacggg ttaatttatt gcgataatta ccatttggca atttttcata attagcataa
      361 attttctgta acgtttccga gcgtaaataa gctcggttat atagcccatc taccggatta
      421 tctgtcgata aatagcgtcc cgtttcggca tcaatttgct gagacaaacg gttaaaatgt
      481 ggatctaccc cggcttgatg gtttggcgtt tcaaaacgat tgagatcttt ttgaactact
      541 gtcaccactt tcccgtcttt cgggtctgtg aactgataag ctttatagcc atcaatattt
      601 tttacctgtt tggcatcatt cggtaaagcg tgccaacaat cattatgcac ccatacccct
      661 tcattatcgg catttgtacc tctaataaag taagtatgat ctttctctac cgtcatattg
      721 taggctttta atctttcctg tttgattttt accttagtga cagtctgcca ctcaccactt
      781 tcagcaagta agcgatagcc tttttgcaaa tgttgagcat caacccactg agcttttgct
      841 atctctccgt tgtaagaatg cccctccgaa gaaatcggca ctctgcccga taatacttgc
      901 gtaaagaacg ggtggatttt gtttgacaca atggtgtggt attttccttt gctgtctgcg
      961 acttctacat acaccgtata atcgtatgga ttactgtaat gagcttggac tttctgatag
     1021 gtggttatac cggtgcgttc atttttcgcc agcaccttat cgcccacttt aatgctggaa
     1081 atctgtcgat aacctttatc agttttgact tccatatcac cgtggaatga gcaagtgcct
     1141 aaactagcgc tcgatctggt cttaggaatc gcaagttctt tacctgattt ggtgactatt
     1201 ttcgccgttg tccctacacc tgttttaaca agagcaccag caccggttaa tgctgtcacc
     1261 acatcagtca tcatattgcc aaactctttt ccggcattaa aagaacctac agcccctgcc
     1321 tgttcatagt aaacctgcat tttatcgagt ttagctaaat actcctgttt agtcatatta
     1381 gcaatatagg agagcgtatc ttctcttgcg atcaattctt tcatcgccac aatagtttct
     1441 attgggcttg agaacatgga gatcaatcct tcaacgctct cagcgagatt ctcaggaaca
     1501 ccagcaacgg cgcctgatac aaaactaaca tcttgcccaa tatcaactaa tccccaatat
     1561 aatcgaactt ggttttcaca gcgggcatca ccatggcagg attttaattc ttgtgagcgt
     1621 ttctgctcct gccagttcga gaggtagtta ttctccactg cccttttccc aatatccgcc
     1681 ccaaccgctg ccgattgtgt actatcccct atcaaacctg aagccagtcc gcttgcaagc
     1741 tggcttagca acgccacatt ctgtttctcg gcttcggtta agtcttgcgt ggatttgccc
     1801 ttgtagaggg ttttaactat aaagtccgct gccgcttcgc tccctgcgcc tgcagcagcc
     1861 cctgccagta cattgttccc tgtcgcagcc gcttccaccg cacccagtaa ggcgtgggca
     1921 atcaggttgg cttgggtatc cccttcggtg tactttttga tttctgcatt taagtatggt
     1981 gaggctaaac ccactgccgc ttgtcccacg tctttcgccg ctaaaccttg caaggctgcc
     2041 gtcaccgctt ccaccgctcg tttggtttta ctgcccgtgc cgtagttttt atcaaactct
     2101 ttttgcaagc ggtctaaatt ggcttctaat ttaccaatct cttccttgct cgctttttga
     2161 gcttgtgctt tgcccaattc cagcttcgct tccgtcactt tttcacgctc actatgcgtg
     2221 taaatctgat aagccttttc tgcaatctcg cctatgcctt tcaccagctc ttgtgtttct
     2281 ttcacctcac tgatatcgta tttcgtcact ttttgattgg cgttttgcgt atctcggttg
     2341 agatgattaa gcgtagtttc cgcatttagg tcttcggtga gggtgatagc gatattttct
     2401 ccaatcgctg cctttgttgt gcttcgctcg ctttcgtttt tattgcccag taagctcagt
     2461 gccgacatcg ggttcacccc acttgtccct ccgctaatcg cgacacttcg ggttttcaat
     2521 tcactgtggt tttcaatatc gccggtggtc agcgtgccgg cttggaagcg gttgttttct
     2581 ttctccgctt ggctagtcat taccgctccc tcaaaatggg cgttcttttt cactttaacg
     2641 tccattccac tcttgcctat gtcgattgca gtttggtttt ccacctgagc agtgttcaac
     2701 ttcgctccat tatatgccac atgaccattt actcctgttg tccctaccgc caatgtgcca
     2761 tgtacgctgc cttctgtgta ttcgctttta tatttgctta tatcttgtcg acttcttgcc
     2821 tcaaaatctt gtacctcacc ttcccaatga tttgctttga cattggttgc atccagcatg
     2881 agtttaccat ttgcagaatt tgtaacaatt ttacccgctt gcagttggtt gttctgccac
     2941 gtttcagttt cgatattctc cttgccttta cctccactca ctcctgcctc aaaaccaata
     3001 ccaaaactat ctctatctaa accgataaat acgcccacac tcgcactgtg attcttattc
     3061 ttagtgttgt tttgataagt atccgcaaca cctttggatt caatacccag cttaccgtca
     3121 agcagcaggg tgtctttcac tcgggtatcc accccttcca gcgcaacttt gcccgctccc
     3181 gaaatcaagg caatattgcc gccgttcagg gtgcttttgc tgtgggtcac gctttgacta
     3241 cggctttctc tttgctgttt ttgcgtgccg agactgactg aaatcttcac cgccggattt
     3301 tctgccgcag catggttttc tgtgagtgca ttgccaagat tgcccagcgt ttctgccact
     3361 ttctgagcat tttgtgctgc aatcacggca tcctccgccg cttttaccgc atatacccct
     3421 ttgagtttct cgttttgtgt tgccttcgct ttttgcaccg attgccgtgc cgattgcacc
     3481 gcatccgtta ccggtgtact caacgcaatg cttaagcccg actggctaaa ttcataatta
     3541 tcggtgctgt taataacatc tttccctgat tcaacccgta ccccgttttt gcctgaaatc
     3601 acggcggttt tttcgttgga aatcagcaca tcgacattgc tcacgctcgc tttattgccg
     3661 gcttgaatcc gaatattgcc cccttcactg cccaatgtat tgcgtgccgt gctttggatt
     3721 gccccctcta agctgttctc ttggcgtgtt ttttggctac cgatagtaaa gccgatttca
     3781 ccaccgttca agaaaccgct gcgttttgtc tcacgaatat gctgttctga aagttggttt
     3841 gttgccgaac tgagcgttac attattaccg ccgataatat caatatcgcc actgcgtgag
     3901 acggcaagaa gactttcacc ttgaatatcg tgaccggctt tcactaaaat gtcttcaccg
     3961 gttagttcag tgcctttgtg ttcggtttca gaaatattgt cataagtcgt ttttgttttc
     4021 ttcgctagcg caccaccact ttttgttttg tgatactctt cataatcgcg agaacgtgtt
     4081 gcgctaccca acaccatatc attttcagcc agtaacgcta aacgcgcttt ggcatccaaa
     4141 tccgctcctt cactgtaaag gtttttccct gaaaccacca catcgccttt gccttgcacc
     4201 cgtgaaatga ccacatcatt caaggcttca ttacgatagt gattgccacc gcccattttt
     4261 tcatcaaaac caacctgtaa agcggtcaaa ttcaactgat tttttgcaga taagtaggtc
     4321 tgcccctgtc cgtcattgat gatgtctgcg cctgctgagg tgatgttgcc tgcctgtact
     4381 tgcagcagtc cattttcatc tttaacgtgc agtagggctt tgcggtcaag gttggtttca
     4441 gcgcgtttga aaccgtctag gtcaatctgt gtggttcgag tggtggaggt atggttaaaa
     4501 ttgcccgcaa tatccagcaa aatcgcttta tccgcttcaa tcttgccgcc gatattctct
     4561 agatcaccgc tcactttggc agcaagcacg ccaccactga gtgtgccact attctctaac
     4621 cgttcggcat taaactgtgc taaacggcgg cctgctatcg tgccttggtt tacaatctct
     4681 ttactgttga tggtaagcgc atcggctgaa atcaggctgc ctttgccgtc aatatcacct
     4741 ttgcgtgcaa ggacatacac tttcggcact aataccgata ccgtttcacc gcttggcaag
     4801 cgaaccgttt gggtttcaaa ccaaacaata tcgctggtca agcttgccac ttgctccggc
     4861 gataaggtaa tgcctaaccg aagattgaat ttctgcgcaa aggtgatgcc ggcatccatc
     4921 agggctttat attggctatc aaaatccgta tagtcgccca aaaattgtct gccggttaag
     4981 cggttgattt gctctcgaat taagcgctgt tcataaaaac catcgcccaa acgtttatgc
     5041 acattgttat ggtcgtggcg tagggcattg aacatataat cactgcttaa ccagcgtttt
     5101 ttatcggtga aatccggatc ggtttcgatc agaacatggc tatccgcttg agggttaatg
     5161 cgataaagcc cttggtttgg caaacgggta tcgaccgtca ttgagcgaac ctcaaatgcg
     5221 gctgcattcg ggcttggtat gcgttcaatc gccattgttg gcggattagg ggcatcgggt
     5281 agattacccc gttcaacctg attgccttcc ggcttcacgg catttgctgc tttagcgtcc
     5341 acataatctg tataagcggt cggtgaagta ttttccagct cgacaaaaat attcatatcc
     5401 ttatggactt cttttaaacg agcgagagga ccatcatttt catcgtagcg ggagtggcga
     5461 cgtcttgtgc ctccgtggta ctcagtaaaa gagaattggc gccttcccag ttcccaatct
     5521 tggcgaacag catctgcatc atcaaggttg gcaattctac tgcgaccaat cgggtttaac
     5581 gctttgcctg caataaccca acttttatcg ttgataaatt catcgctttg ataagtgaga
     5641 tcgccacctg ccaagatctg tgccggtaag ctggctttgg tgatattctc ttttaccata
     5701 cgctctttaa tccacaaatt ccagaaatgc gggtattctt ggcttaaatt cgctttattg
     5761 tgctttgcaa tcgcttcatc taatgcttga atattggcac catattttgc ttcccaatca
     5821 attaacggtt ttaatagcac ataacgctga taagccgctt ctgccgcttc ataggctttc
     5881 agttccgctt gatatgtttg tagtcgtttt tggtattggg cttccgtttc cgtagagcct
     5941 ctaacaggtt caatcggtct tgccggaacc accggtgcaa tgccttgccc ttgttccttc
     6001 tgtaattttt cctgctctgc ctcacttaaa tgctgattcg ctaaatcttc ttcattcatt
     6061 gcttgaataa tttcaggcgt catttccggt gcatcttcag ctggtggtgt taaattaaac
     6121 cacgtccata ctgggttatc ttttttataa ttacctgcag gtaatagagt acaatctaca
     6181 ctttcatcat tcgcacagct ttgagcatag ggttttgcca atacggtcgt ggcattcagc
     6241 tggctaatat cggtaattac cggcaagttt gcttcatcat acttttgcca atagctccac
     6301 gttttgcgat agtagccttt gcggagttga ttcacattaa ttgtcggcaa atgcccgtta
     6361 tcatatacat cacttccacc tcgattatgc ttatctcttg gcaaaataaa atgttcgttc
     6421 acagtttggc gatcagtggt ctccaattcc gaacgataat gactatttac attcgctacc
     6481 ttatccgcat tcaactgaat acgcccttca gcttcaataa tactgctgcg gttatgtagc
     6541 tgccctgcgt tgccaataac ggtatcttgc tcatttaatt gacgtccaat cgctatctct
     6601 cctccgctat atattaatga accgcttttc ttattcgctt cataaactag ggtattattt
     6661 tcaattactt tagccgctaa accgagagat tgacgagcag caatagtggc agaggtcccg
     6721 tctttatctt gatttagtat cctctccgca cctaacgcca ccttatcgcc ataaatattc
     6781 cctgtgccga tattgtggat ttcttgagct ttaatcacag tttgagcgtt atcgttgtcc
     6841 gagcggctat tgattaagcc ttcgttatag acggttgaag ttgcagtcaa acgggtatct
     6901 gccgagctta ttcgggcatt ttgtgcattg gttatttggt ttgccgtgag ctgcaagcgg
     6961 tcatttgcgg ctaatttttt gcgattgaga atatcgccct cagtctgaat aatcatcgac
     7021 ctattcgcat tgatatcttt ggtaatatca aagttctctt gcaaattcag gcgaatatcg
     7081 cctgcttgta catcaccatc accggataac gctttggcag tgatctccaa accattattt
     7141 gcagaaactt ttccctcggt attcgtcatt gtgagtgatt ttccgccgaa aatagccaga
     7201 tcgccccaac ttaaaatttc cccattacgg ttatttaagc tgtcgctgag ggtaaatcgt
     7261 gctgatgagc cgatataaat accgcctttt tcattattga gctgttttgt gctgttcagt
     7321 acaaactgcg atgcaataat cccctgtatt ggctgaggtt ggcgtgccaa ggtaccttga
     7381 ttttccacct cgaaactgtt catcgtaagt gagccacctg cttcaataag tgagccattt
     7441 tccgagatcc gattatttaa gacagtcggt acattgagcg tgatatctgt ggccgatttc
     7501 agtaccccac cttggttatc caaaagcgtg ctatttaggg tgagatttcc cacactttga
     7561 ataacaccgt gccgattatc tacttgttgg gaaaccgtga gcgctaactc ttttactgaa
     7621 ctaatttctc cctgctcacg gttatctaag gattgagcgt taatcgcaac accgctggcg
     7681 gaaattcgcc cgccttgatt ttgcagttcg ctagttatat caagggtttg ctccgtttga
     7741 gaggtgatca cccccgattg attttttaac gtattgaccg taatcgcctg tttttcgcca
     7801 ctcaaaatca gaccttgctg attattcagc aatggagcac gaatagataa ctcgcctttt
     7861 gcaaccaatt tgccatcgac tgaatccaca gcatcattta aatttagccc taaacgcttg
     7921 ccactactta atagcccttg gttatttgtt aaacgattac cgtcaatctc aaaatgtcca
     7981 cccactgaaa agcgagccga gtcagtatgg atactctctg cttttaggcg aaaatcctgc
     8041 tcaccagtct gcttccaaac cgagccacga gcatttaaat tcgcttgttg ggcctcaatc
     8101 acctctgcgg ttagctggct tccttcagtg gaaagccatt ttggggtggt gagcttgatc
     8161 tgatttgcac taaactgcgc actattcgcc tgaatatcgc ccgattttgc actgtattca
     8221 acggtatggg cattattttg gctctgattg gcatcaatct cagctgccgc cacgttaatt
     8281 ttccccgaag cgatattttt tccctgcaca gtggtttttt ctggggcagt gagttgaata
     8341 gttttccctg ccacagattg agcttccagc ttccgtactt caccttgtgc agtgtcggtt
     8401 acgtccaccc cagcggcaat cagtgagttt ttgtcggcgt gaatttggcg ggcggtgtag
     8461 gtgatattgc cttttgcgac cgtttcgcca ctttgctgga ttttagtttc ggcttttttc
     8521 tgaatattgc cacccctcgc cacgatggaa ccgctatttt gaatatcggc tttcgagtta
     8581 agctgaatat tgccctgttt attttcaatt ttgccttggt tgtcaatccc gtgttgggca
     8641 ttgagttgca cttgtctttg agcgttgaac gtgccgctgt ttacaatccg cccttgactg
     8701 tcaatggtga gcgtatcggc acttgcaccg atatgcccag cgttacgcac gcccacgccc
     8761 tgttccgtac caatcaggtg gattttgccg gcatacattc cgcccagctc acccacatca
     8821 atcgcaactg tgggcttttc ttcccctgca agcggttgat ttgtatgaat aatttgcaaa
     8881 ttgttgtccg aatttgaccg cttgacggtg tttttgccgg taatgacttt agtctctttt
     8941 ttcgaccaga caccggcgtt gattttcgct tctcgggcga ggatatcggt gtaatccact
     9001 cggctgttgt ccagcccttt gccagcaacc gttaccttgc ctttttccac tacaaaacct
     9061 tctaaattgc cttgatttat ctgtggtttt ccggtggtca gcgtggctcg gtcggcgttg
     9121 ataataccgc agccgtcaca gtgcaagccg ctcgggttgg cgataatcac ttccgctttt
     9181 ttgccagcca cttccacata acctttcatt accgaaggct tactggaatt gacttcattt
     9241 aaaatcacct tcgcttcgcc acgggcaaga tacgggttgc cttgcaccat accggcttgt
     9301 tgggtggcgg tgttggtgcg gctgttgttg agaattgccc ccttctccgc tacgtcaaat
     9361 tggctgtatt tattgtggga aagcccttta tcgttcgggg tttgaatatt gatttgtggc
     9421 agcccgttgg cggtttgcaa aataatcggt tgctgatttt tcggggcagt gctatcggct
     9481 tgaataatca aagtttccgc catagcgttg tctgataagg taacgaatcc caacgcacag
     9541 aacaagctga acgcaagcgg tcgaattttg caaatttttt gtaaaattgc accgcttgtc
     9601 atactttcac tttctgattt acctgctaat tttgctaatt cagataccac cacaatacgt
     9661 tgtaaggtct tgctgaaaat agtgcgaaaa caatgcttat tcataataat tccttaatag
     9721 cacaatatac ttaatacaat atgcccaatc attcattaaa aattgtaacc aatattaaaa
     9781 ccggcaacgg tgtctgaggt tttaaaccct tccggttttc gcatcggtct accggcaaac
     9841 acgtcataac taaatccttt aactccaccc cgaaacccaa tggctgttcc cattaaatga
     9901 tgtccgagct gattttccgt tgcccaaccg gacactcgac caccatctac cgcccaataa
     9961 aaagcgtggt tcggattaaa ttgccagctc aactcattac gccagttcca gccccgctca
    10021 ccggaaagag tcagttcacc gtcaaatcca cgtatggtgt aacgcccgcc aatcgaaaaa
    10081 cggtcttgcg gaaccagagg ggttttattc cattgggcat ttaggctact ttgccactgc
    10141 catggctgct tgccccaaaa aaacggtttc gtcaggcttg cacttgccgt gatgatttta
    10201 gggcgagaag tcccttcgcc ataatcttcc tcgggagcag ataatgcccc tcgtgctgcc
    10261 gtacctcgtt tgaaattagc cgaaagctca agcgtagcgg tcgggaaata ttctttatgc
    10321 gaaaaacccg cttcccaacc tgccattcgg cgtttttgta cttcaatttc tgagccgtca
    10381 atatagtttt gcgactggcg tggccaaagt gaaccggaca agctcgtttt acgtttggca
    10441 tcacgataaa gcaaataaga aaaggttaat ttatcggtat cactttcacc ggcgtagaga
    10501 tagctcttgt caaaggcacc aaatacttct tgatgataac gatgatgagt gtgtgaaaat
    10561 gctaactgcc aatagccaaa cggcacggaa tagtaaagcg tgagattttt actggcacgt
    10621 ctgccgttat catcaccttt ttgtttcatc gaatgggtaa aagaggtata gaacaggtca
    10681 tttgccgaaa aaatattatc tatagacaga gtggcggagg tttgtaattt gcctgtggat
    10741 ttcgagccgg catcgtccag cccaagattt aagcgaaatg gaaacgcttg cgaatagctg
    10801 atttttaaat cactgtctcc cacctccgct ttttcgcttg agctgggtaa aatctcaata
    10861 tttgcctccg ccgtcggcac ccgttttaga ttttccagag actgctcaat atctcgcaca
    10921 ttcagaatat cgccttcggc aaaagtaaaa ccggttaagg cgtgcagctt ggtaaaacgc
    10981 ggtactttgc cgctatctac cactaaagta ttgcgtattt tgcccggaat cacggttaaa
    11041 actaattttc cgccacgtaa atcttgctcc gcagtaacca ctcgtgtagt gacataacct
    11101 ttgccaataa tttcattttg gatttgcttc atcaacacag ctaacccttc accaccaaag
    11161 cagtgaggta atgtcaaatg aaatgatttt actgcttttt caaacgccca ttggaattgg
    11221 ctggtagtca gagaattgtc aggagaatag tcaatgagag tgatttgatg aatggggtaa
    11281 caaggcaatt cgtgattgga aagagtaagt gtatcattga tttgtgtctc gagccgtaca
    11341 tcagctttcg gctggaattt ttctgcttga ttttgttggt attgctgttg gcgatgttgc
    11401 tgggcagcat caatttgttg ttgagttgca tcaatgcgtg cttgttgtac aaggcttgaa
    11461 gaatttgctt cagcaacaaa agaagcactt aacaataccg tgcttaaaat cagattttgt
    11521 ggggttttca taagatcaaa taagtaagac attcaacgtt tttagtctat aaaaatttat
    11581 gttgttttgc aaactccgtt ttatggagct ttatacatat ctgacgactt tggtttttta
    11641 tgctattatc tccgccattt ttatactata gagaatagaa taaccgtgtt agtttcagat
    11701 tttcatttca acttacccga tgagctgatt gctcgctacc cgactgccga acgctctgcc
    11761 agccgtttat tacacttaaa tggcgaaaca ggcgaatttg ccgatcaaca atttgtggat
    11821 ttatacgatc atatcaacga aggcgatcta ttgatcttca ataacactcg agtgatcccg
    11881 gctcgccttt acggtcgaaa acctagtggc ggcaaagtag aggcattagt ggaacgggtg
    11941 ctagatgaac accgctgctt ggctcacgtt aaagcctcaa aagcaccgaa agaaggggct
    12001 gaattgatct ttggggaaga taagctaggt gaaggcaaag gctttacggc gacaatggta
    12061 gctcgccacg atactctgtt tgaattggtg tttaacgaag agcaaccgtt attcgaattg
    12121 ctacagcaag ctggtcatat gcctcttcca ccttatatcg accgccccga tgaagatgct
    12181 gaccaagagc gttatcaaac cgtttatagc aaagtgttag gtgcagttgc cgcccctacc
    12241 gccggtttgc attttgacaa tgcaatgctt gaaaaactaa aagcaaaagg ggtggatact
    12301 gccttcgtaa cattgcacgt tggtgccggc actttccagc cggtacgggt agaaaccatt
    12361 gaagatcata aaatgcacgc cgaatatgcc gaagtgagcc aagaagtagt cgataaaatt
    12421 ctcgcaacga aagccaaagg aaaaagagtg attgcaattg gtacgacatc agtacgttcg
    12481 gttgaaagtg ccgcccaagc ggctgaaaaa gatgggaaat tgattgctcc gttcttttct
    12541 gacaccgcta ttttccttta cccgggaaaa acctttaaag tcattgatgc gttagtcacc
    12601 aatttccatt taccggaatc cacgctaatt atgttagtct cagcatttgc cggctataga
    12661 aatacgatga atgcctacgc ccacgcagta gaaactaaat accgtttttt cagctatggc
    12721 gatgcgatgt ttatcaataa aaacccaaat gcgttgagtg atgttcctta atttatgagg
    12781 gttataaggg aataacatta tgaacaaaaa caatcttcca accattttaa gggattgttt
    12841 tcaatatatt caataatttg gaagtacgat gtttcattac gaataatgtg ttcataataa
    12901 ttcctttgcc aaatttcaga aatatcggta ttttgacgaa cccatttagt tacgccaatt
    12961 ttaaaaccac gcacaataga gccgattgtt cgtgatgttc cccgtaaggg cgaaacattt
    13021 ttcgccctta tacatggggc aaatgatgat ttgcccctac agtttcgacg atttcaataa
    13081 tgccatgtaa atgattaggc ataatcacaa agctatgcaa gcttacattt ggaaaatgat
    13141 cgggtatatc ttcccaacat tgacgtacaa tattccctat cttattaagc ctcatttcat
    13201 catcaacaat ctcaccgaga aaatggtgtt tatttttaca acaaatagta atgaaataga
    13261 atccttgtga tcggtaatca taatgcttta gacgaattga acgcctccta tgaatctccg
    13321 gctgatattt ctgcattttt cttattcctt aataaaactg cttataccaa ggggaaaatg
    13381 ccccccttgc ctgctcaatt tcaatagaac ttgggtaaaa ttttactctt atcattcccg
    13441 tttctacggt atttaataca ttaatatgtc ttctgtttaa tctctcaata atctgtttat
    13501 tcggtaattt ccatgggttc catcttccag cagaaatcac tgcaaatgct ggctgggtaa
    13561 tcgataataa agtttcgcca gtgctgcttt tgctaccgtg atgtccaacc tgtagaaaat
    13621 caattttgcc gagctgatgg gcaaattggc gttcttgttc cacgccagaa tcccctgtca
    13681 gtaatatctt caagcggtcg tttttggcta aaataacgca agagtcttgg tttttagctc
    13741 gttctgcaat gtgtgacggg taaattgcca ataattgcca ttcgccaaat tgccacgatg
    13801 ttccggcaat acaaggctcg ggatttatat tgtgatacgt caccttgctt gaactaatta
    13861 accttgcttt tgggtatgct tgcaataact ccactacccc acctgaatga tcattatcat
    13921 cgtgacttag aaaaatcgcc tctacctcaa tgccatttcg ctttaaatac ggcaagattt
    13981 ccatttttgc cattgaattg cgactaccat catttgcttg ccaactggag ccggtatcgt
    14041 aaattaccgc tttattttgt tgataaatga acgccattgc cagcccttgc ccaacatcaa
    14101 acataatcca ttctgtttgg gtttgattaa agagcttagg gagataaaaa ctcagattga
    14161 acaataggga taccgctact gcacttaacc actttttata agatagccga tataatttgc
    14221 aatacagcaa tactaaaacc aataaattca gtgaaagtaa ctgccactgt tgccaatggc
    14281 ttaatgcaaa ccacgcatta gaaaatggat ctaacagcca taggctaaat tgagcaagat
    14341 agtccgccaa cagccacgtt gaaaacagat tgtcggtcaa gagcgtaaat aaaataagcg
    14401 gtacaagcaa aaagctatac aacggcacaa taatcaggtt ggcaagcagt gcaaaagcag
    14461 agatgccctc aaaaaagtag agttgaaccg gtgagaaaat cagccaaatg ccgatttgta
    14521 agtgcaaaag cgataaccac aagcggttaa attttgtgat ttttttacga tattcatcgt
    14581 ttaaaaatcg gctaagagga aaatattgat accataaaat taaacttgct accgctaaaa
    14641 ttgagagcca aaaactatca gaaagcaggc tcaatgggtc aattaaaatc agtaacgcca
    14701 ctattctccc ccaatattgc caaggggtat agtgtcgccg cagaacttgg caaagcaaga
    14761 caaacgcaat cgccagcaac gctctggcgg tcggcacggc aaaaccggct aaatagctgt
    14821 aaccaaatgc ggtgatgaag ctaactattc ttgcaaaata aagtgaaaat ccgaccgctt
    14881 gtaatgcggt aagctcgctt ttcaagcaaa gccattgcac gcctttggca aagtaaacac
    14941 caaacaacat tgccagcccg atatgcaagc ctgaaatggc aattagatgg gcagtagcgg
    15001 tttgttggaa ttgcccccag tgttctgttt tcagccacgc cctttcacca aaagccagag
    15061 ccaataaaaa gccttgcgta ggcaaagcgt ccgtttcagc tttcacttta ttcagccaat
    15121 ttgttcgcaa gctataatca gttttggcta atgtttccac cttgcgaacc gttgctgtca
    15181 tattgatatg attggcaaaa taccaacgct gtcggtcaaa attaccgata ttgctacgag
    15241 ctgaaatagg acgaagagcc agttcggctt gatagaattg attaagtaac aacggctgtt
    15301 tcgattgcca gttcaagtag atcttctcgc ctgtatttag tgtcgcaatc gctgtttgat
    15361 aatcggtttg ttttaagatt ttactgattt caaattgaac aggcgtttta ctagcagtcg
    15421 ttttttccgc attttttgca acttgaatga tctgaatata gccaatacaa accaataagc
    15481 cgagtacagc cgttaatttt gagcgtagat aaacactcaa tatcagcact aaggttccta
    15541 ttactatacc cacaaataga aacgctttag gcaaccataa aataggcaga tgaaatagaa
    15601 tcagggcaat acaaaaacgg tctaaagtca taattcggct tactttttaa agctgagtat
    15661 gccgtttgtg cttaatattt tcagaataaa ttttcagatt ttcgacacag ttcgcaaaaa
    15721 tacttgaaaa aataaaggca gactttttag cctgccttat aaagaagaga tattatgctg
    15781 atttttgatc ttcagcgtaa cttactgctg cagtgaataa tacgtctgtt gatgaattta
    15841 atgcggtttc aaccgagtct tgaatcacac caatcacaaa acccacccca attacttgag
    15901 cagcaatatc gtttggaata ttaaataaac tacaggctaa tggaatcaat aataatgaac
    15961 cgcctgccac acctgatgcg ccacaagcac agattgatgc aactacgctt aatagtagtg
    16021 ctgttgcgaa atcaggttga ataccttgtg tataagctgc cgctagggtt aatacggtta
    16081 cagtaatcgc tgcacctgcc atattaatac ttgcacctaa tggaatagct acagaagcga
    16141 tctcatcacg aacgcccaaa cgcttggcta aattcatatt caccggaatg ttggctgctg
    16201 aactgcgggt aaagaatgcc gttacaccac tctctcgtaa acaggtaaat gtaagtgggt
    16261 atgggttgcg gcgaattttc caatacacta ataatggatt tagtactaat gccacaaata
    16321 acattgcgcc aactaagact actaataaac gtgcgtaatc ttcaaacgca tcaataccat
    16381 tgatggcaac agtttcagct actaaaccaa ataccccaat aggcgcaaat gcaatcacaa
    16441 ctttcacaac aaacgaaact gcgttagcta aatcatttaa gaatgctttt gaacttgccg
    16501 aaccatggcg gaatgcaatc cctaaaccga tagaccacgc aagaataccg ataaagtttg
    16561 cattacttaa tgcgactaat ggattatcaa ctaagttaaa aataacggtt tttagaattt
    16621 caccaatgcc ttgtggcggg gttaaaccgt ctgggcttgc agtaagctct aatgtagttg
    16681 ggaacataaa gcttaaaaca acagccgtta atgccgcaaa aaatgtacct aatacataaa
    16741 gcaccagaat cggctttaat ttgctatctg aaccaacttc tttatttgca atcgcagcca
    16801 aaactaatac aaatactaaa ataggcgcaa tggcacgtag tgatttcaca aaaaattgac
    16861 ctaatacacc aacgctggta gcccattctt tattaataaa tgccagcaat acccctagca
    16921 ctaaaccaat ggcgatacgt aatactaaat taccgccaag aatttttgat gataatgatt
    16981 gactcataac ccttcacttc tgtaagacaa caaaaaataa ggataaataa aatttatccg
    17041 cctgaaaaaa taggtttata agattagcgg aaaataaaca aatatggaat aaacaagcgg
    17101 tttatttttc agattttttt acaaaaaagt gaagtttttt acattccatg gctatcatat
    17161 tattttttcc ttaggttctt tgaacatcac cattctttca gtacaatagt tctctaaact
    17221 cttttattta ttttatttac tatgaaacca accaataaag cagattttca acgtgtgatc
    17281 aatgcagctg gctactctat gaaggggtta aaagccgctt atattaatga agccgccttt
    17341 cgccaagaaa tttggtgcgc tactatttta ttccctctag ggcttattct aggcgaaacc
    17401 aatattgaaa aagcattatt agtaggcaca gttttacttg ttttagttac agaactactc
    17461 aatagtgcgg ttgaatctgt tgttgaccgc attggggctg atttccacga gctttctggt
    17521 agagctaaag atattggctc tgcagctgta tttatggcga tggttttact cgctataact
    17581 tggatattaa ttttgttttg ttaactctat ttttcaacca acactcttac tgaggtattt
    17641 atgcgcttaa aaaaaacatt actttcggta gcactactta gtgcaacatc agcaatggcc
    17701 tacgagacag gtaaaacata tcgttttacg gttttacata ctaacgatat acacggtcac
    17761 ttttggcaaa gtgataaagg cgaatacggt ctcgctgctc aaaaaacatt ggttgataat
    17821 attcgcaaag aggtcgcaga aaaaggtggt tcggtattaa tgctgaatgc aggtgatgcg
    17881 aatacaggcg tgccggagtc agatatgcaa aatgcacgtc ctgatattga aggaatgaat
    17941 gcgattggtt acgatgcaat ggttctaggt aatcacgaat ttgattaccc actgcaaatt
    18001 ctctctatgc aagaaaaatg ggctaaattc ccctttattt cggccaatgt cattaataaa
    18061 aaaacggata aacccattgt aaaaccttac gtgatgttag aacgaggcgg actaaaaatt
    18121 gctgttatcg gattaacaac cgaagatacc gcaaaattag gtaatccaga tgtaacggaa
    18181 aatgcctttt tcaaaaaccc tattgaaaca gcaaaaaaca cattagctga aattaatcaa
    18241 aaagaaaaac ccgacgtacg tatcgcttta acccatatgg gttactattt tgacggtaaa
    18301 catggtacta atgcaccagg tgatgtaaca atggcccgta ccttagaaaa aggagcgttc
    18361 gatttaatca ttggcggtca tacccacgat actgtttgta ttgatgaaaa aggtcaattc
    18421 aaagccaaat atacgccggg tgaggaatgt aaaccagact tccaaaacgg tacttggatt
    18481 gtgcaagccg gcgaatgggg caaatttgtt ggacgggctg attttgagtt taaagatgga
    18541 aaagctacct tggtaaaata tgaattaatt ccggtcaact taaaaaaaac cattaaaaaa
    18601 gaagacggta ctaaagaata ccgactttac cagcctgaaa tcaaagccga tgaagcaacc
    18661 tataccttat tgaaaaaata tcaagatgag ggcgataaaa agcttaatat tgaagttggt
    18721 cgtgtgaaag ggttattaga cggcaaacgt gagcatattc gcttccaaca aaccaatctc
    18781 ggtcgtttaa ttgcacaatc gcaaatggaa agggtaaaag ccgatatcgg gattatgaac
    18841 tccggcggta ttcgtacctc ccttgaagaa ggtgtaataa cttataaaca tattctgact
    18901 gttcaacctt tcggtaatat gattgcaacg gtggatttaa aaggacaaga attgttagat
    18961 accctcacca ctattgctct gaaagaagtt gatactggcg cttatcctca atttgccggc
    19021 atttcaatgg tagtcgaccg tacagcaaaa actatttctg atgttaaaat cggtggcaaa
    19081 ccttttgata aagagaaaac ttataaagtt tctctgcctg actatgttgc ggctggtggc
    19141 gatggctacc cattactgaa aaaacaccct agctatgtca atacaggctt tattgatgcc
    19201 gaaatgctga aaaaattctt cgaagaaaat aaaattattg aggcagataa atacgatcca
    19261 aaaaaccaga tcattttcaa atagagctat agaaaatgaa actcactctg gcagtctctg
    19321 ctcaaaagag ctgtggctgc ctgtagattg ttttcttact ttcaagtgtt ataggaaatc
    19381 gataaaaaat ccctaccaaa ttaattcatc accatatgat gaaaattaaa aaacctctgg
    19441 caatactttg ccaaaagtct ttgactttta tagggtaata tcactgctta ttagccttta
    19501 acacgttgtt ccaaaatcac attcagtgtt ttttgtttct gtttcaacgc attttcgggt
    19561 tcggctttaa ctagtaaggt ataaattaaa tcaagaacga aaagttgtga cattttagta
    19621 ccgatagaat ctccttgcat atgcccctgt cgattaccat taattaacac ataattagcc
    19681 tcttccgtga cgggggaacg taaattgtgt gtaatcgcaa ccgttgtcgc tttatttgca
    19741 cgagaaaaac gtagtgattt cacaatttct tcagaatagc ctgaatgact aatccctata
    19801 actaaatccc cctctttcac caatgccgcc tgcatataca taaaatgatt atttgtgact
    19861 gcatcggttt gtagcccaat acgcattaat ttatgttttg catcttctgc ggttaaccca
    19921 gaagaaccca ctccaaataa aaagatccgt tttgccttac gtaattcttc aacaactttt
    19981 tccaacacgt taaagtcaag caaattaata gtctcttcaa taacgttatc taaactcact
    20041 ttgagcttct cagcaatatc tttcgatgta tccgattctg aaacatccgt atcaagcaat
    20101 actctattat cttgattttg cgtagccaac tctattgcaa gctctaattt aaagtcggta
    20161 taacctttaa aacctaatgt acgacaaaaa cgaataaaag ttgcttcacc aacatctaat
    20221 tgtttggcca cttcagataa tgaacattgg ctaagtaatt ccggctgaga taaaatagca
    20281 gcagctattt tcttctctgt tttggttaaa ctattttgta gcgagctaat tgtattaaga
    20341 atttttcccc gactagacat agtagcctcc taaatcaatt caacaggtac tttcaccacc
    20401 agttttttca atgttttgtt gccattcacc gaatttccag gcttatgtgg ttcataaggg
    20461 aggaaaatag cgaacatatt tggcttgagg atcaagttat ttttatcatc aatctcagct
    20521 gttaattggt agtcatcttc atctcgatat tcatcatact tagataaatc tggctggctt
    20581 aacccgtatt caatcatttc ttcgccgtct atcaataatt gaatatcgat aaattttcgg
    20641 tgtaactctg cttttttccc ctcagctggc gtagtttcaa atgacattac attcatgcga
    20701 ataccatttt ctaattcttg ccagcctaat tccaaattaa ctaaatctaa actttttaat
    20761 tttttacaaa ggcgagcgaa tactggtgga agagatttta aataatcatc tcttgataaa
    20821 tcggctaata tcatataatt ctcctaaaaa taactaattc taataatctg ctccatacta
    20881 ct
//
LOCUS       DANLTI010000034        20504 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.034, whole genome shotgun sequence.
ACCESSION   DANLTI010000034 DANLTI010000000
VERSION     DANLTI010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20504
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.034"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..669)
                     /locus_tag="PXB09_000966"
     CDS             complement(<1..669)
                     /locus_tag="PXB09_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDL5233101.1"
                     /translation="MSFKDMTGQKVPSVTFRTRQNDAWVDVTTDELFNNKTVVVFSLP
                     GAFTPTCSSTHLPRYNELACEFKALGVDDIICMSVNDTFVMNAWKADQESENITVIPD
                     GNGEFTEGMGLLVDKNDLGFGKRSWRYSMLVKNGIVEKMFIEPQEPGDPFKVSDADTM
                     IKYLSPNWTAKESVSIITKPGCLFCAKAKALLKEQGYTFEEIVLGRDASTISVRAITG
                     KTSVP"
     gene            784..1668
                     /gene="oxyR"
                     /locus_tag="PXB09_000967"
     CDS             784..1668
                     /gene="oxyR"
                     /locus_tag="PXB09_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDL5233102.1"
                     /translation="MNIRDLEYLIALAEHKHFRRAAESCNVSQPTLSGQIRKLEGELG
                     TILLERTSRKVLFTQAGLTLVEQAKVVLREVKILKEMASNQGKEMSGPLHVGVIPTLG
                     PYISPIIVPALKAEFADLELYIYELQTNQLLDQLESGQLDCGIISFVKESESFIEVPI
                     FNEEMYLVVPEQHEWAALKKFDMNLLKNRELLFLDSGHCLRTNTLDYCLSIGAKENPH
                     FKATNLETLRNMVAANVGLALIPKLAAKPIKGVHYIPLENPKPFRAVGMVYRPGSPLR
                     ARYERLAQAITKIMQSEA"
     gene            1671..2303
                     /gene="fabR"
                     /locus_tag="PXB09_000968"
     CDS             1671..2303
                     /gene="fabR"
                     /locus_tag="PXB09_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDL5233103.1"
                     /translation="MANGMSVRAIQKEKTRRALVEAAFNQLSSEKNFSNLSLREVARE
                     AGVAPTSFYRHFKDMDELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFEL
                     IADRPNVFQLLLRESSGTSQAFRTAASREIQHFVAELADYIMSKDNHSNRELAYIQSE
                     GLVTLVFTAGSHALDMNNQEREKLKQRVIMQLRMLIRGSTYYANKQASST"
     gene            complement(2330..2629)
                     /locus_tag="PXB09_000969"
     CDS             complement(2330..2629)
                     /locus_tag="PXB09_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HDL5233104.1"
                     /translation="MKKADIQKMQDCYNQWVELLPELEKGIEQWKRASALLEPLSRFY
                     ASPEWRELHDSFDEQLDTKGNYSILSEDALWNALSEHHQLALEWLKLSTAYITKE"
     gene            complement(2718..6533)
                     /locus_tag="PXB09_000970"
     CDS             complement(2718..6533)
                     /locus_tag="PXB09_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5233105.1"
                     /translation="MKGSGLATVGAPETGDNGQTIYTVDVAKAGAPTVTRGNVADAIN
                     NSEKTSSVVAGSKAVTVKAGKEDDKGNTEYTVDVATDKSIGRDNDGNMTVNTDNVTIV
                     KDPTTGEVKANTTTLNNSPEGKVTEPTGDDAKKLVTAGDIANAINNSGFNVTAGDGVD
                     GGETKGKKTQLIKPSETVTFDAGKNMTLTQADGKFTYTTKDNVAFNSIDMSNGKPDTT
                     GSITNLKSGVGGTFADKAAPTDAERKAIADNINNATGDTLNNAVNVGDVQAAMKAATT
                     KVEGDKGVTVTSKTNDDGSTTYTVEAKTDGTTIKVNDKGEITANTSELTNNPDGKVEE
                     PTEPNALVTAKTVADAINNAGFNIKANGDEKSLVKTGDTVQFLNGKNIEITRDGNNIT
                     VSTAKNVNFDSVQFGNEGPKITNNGGNINVGDKDGNAVKVTNVAAGDVNADSKDAVNG
                     SQLYTFAMASREEVKSTDKSVTVNTTKNADGANVFDLSVNTDDVTIVKDPTTGAIKAN
                     TTALNDANNDGRIDEPTADDAKKLVTAGDITNAINNSGFTLKTSAVEGGEKLSGGDEL
                     INPGKAVEMVAGKNLTVKQEADGKVIYATKDDVKFSSVTSNTVTVPTDEADPANNPIT
                     INKDGINAGNKAISNVASNLIPVTADDKVQPADNNPTNLADKLSNAATLGDVLNAGWN
                     LQGNGKAVDTVVHNDTVDFINGKGTTVTVENKDGKNTIKVDSPIEFVNQDPTDSSTPS
                     NTAKFTGEAPVQLGNVASSVRNEDGSTPEGKDRAEAIKNAEGDKLNNVVNLGDLQAAT
                     NAATTKVGGNRGVTITPSTNADGSTTYNVEAKTDGTTIKVDNEGNITANTSELGNNED
                     GTVKAPTQPNALLIAQTVADAVNNAGFNIKSAGNKAAGDQAATKLVKTGEEVVFEAGD
                     NLTVKRDGNQFTFATAKDVSFNSVQFSENGPKITNDGDNIKVGDKDGKPTKITNVADG
                     DISPVSTDVINGKQLNNYAKVNGNNIGTDEDGSINIVNGNGTTITSDKAGEVKVNVNI
                     TDLTVADNGKINVQDPNGTGSRFVNATTVANAVNNVSWNVDSKAVGTGAVEGDKAPAK
                     VKAGSTVSVNAGNNIKVTRKGSDVTVAVSDTPEFTSKTGDTLVNNNGVTINNGSAGKA
                     VSLTKDGLNNGGNRITNVKAGEADTDAVNVGQLKGAVNHLNNKIHRNNREARAGIAGS
                     NAAAALPQVYIPGKSMVAAAGGTFKGENALAVGYSRSSDNGKLILKLQGNANSRGDFG
                     GGVGVGYQW"
     gene            complement(6496..6981)
                     /locus_tag="PXB09_000971"
     CDS             complement(6496..6981)
                     /locus_tag="PXB09_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233106.1"
                     /translation="MDTGSITVDNTTGAVTTPAEEDKVATTKTVSEAIQKAGWNAKSG
                     GNKADGDQEAAELINPGEKVIFAAGDNLKVKRVGTIFTYETAKDVKFDSVTFGDNGPK
                     ITNKDGNVNIAGNDGNPTKITGVKAGEADTDAVNVSQLKQAAASQNRSERFRFSNCWC
                     T"
     gene            complement(6990..9149)
                     /locus_tag="PXB09_000972"
     CDS             complement(6990..9149)
                     /locus_tag="PXB09_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5233107.1"
                     /translation="MGARATSANAIALGTDTAATGNRATAFGAGALATGNRSTVMGWR
                     SAASGTRSFAMGSGAMGDKSVANATYSLALGSSANANATSTATRGTAIGYNATVSGVN
                     ATALGVSAVSSNQSTVAIGDSAKASAGFAIALGSGANVALNNSVALGSNSTVSNAVAV
                     PSATVNGITYSGFAANTTAAGNVVSVGSNTIKRQIQNVAAGQISATSTDAINSSQLYM
                     AMNATGNLANSTKNILGGNATVKPDGSVTYTNIGGTNKNTIEEALKAVKTEVVAGSNV
                     NITNATGANGQTIYTVNAYNTTANSSSPDYITVTGKAATAANTTNYEIGLTKKAIDDF
                     TKDTQATVVSNDGTVTVKSTERNANGTVIYDLSVNIPAQASQIQYFSVNSTVPENQAN
                     DGAKSRNSIAIGPNATATGGEQAAVALGTNSNANGNGALSLGVATVSKGIQATAVGHS
                     ANATANGTTALGRQTNATAGDATAVGSNANATAEKASAFGVAANASANASLAVGANSI
                     ASAQSAVAVGTRANATAQFATALGMGAQATLNSSVALGSESVVRAATPTENATVGGIT
                     YNGFAGVNKDTNYVVSVGSAGKERQIQNVAAGQISATSTDAINGSQLYMAMNATSNLA
                     NSTANNFGGGSVVNPDGSVTQPKYNVTNAAGTQYGNTATNVGDAITNLNNYVNQGFNI
                     KDNAGETKGTVTPNESVQFVNGKGTVSNVTQEADGVK"
     gene            complement(9378..9578)
                     /locus_tag="PXB09_000973"
     CDS             complement(9378..9578)
                     /locus_tag="PXB09_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR domain-containing protein"
                     /protein_id="HDL5233108.1"
                     /translation="MNQIFKVIWNQATQSWVAVSELQRAKGKTKSVSSASKATLALLA
                     GASAVLGANDAVAVVSYRFNNK"
     gene            9942..11096
                     /locus_tag="PXB09_000974"
     CDS             9942..11096
                     /locus_tag="PXB09_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDL5233109.1"
                     /translation="MNQFFPLIFSLTLFSGVTLALEKAPRTMPTEGINKPLLGQILFF
                     DNMLSHNGSQNCSSCHNPDYAFIDNRTTPAKGVVSQGDTPTKFGKRNSPTMLYAKYSP
                     EFHFDEQSQEYIGGQFWDGRAKNLAEQAGMPPIDPNEMGMPNKLEVAKRLYNVPMYQR
                     FLGQFYGEKVWESYESVYAAMEDAIATFQQENKLLAPFDSKYDLFLKGEVQLTALEEK
                     GRALFFNKAQTNCSSCHQLQSAANHQEETFSNYHYYNVGVPGNPDLIAVNGFAPDFVD
                     LGLFENPNVKGDETQKGKFKTPTLRNVAVTALYMHNGVFKELKTVLLFLDSYNNPERK
                     INPETGTAWQQAEFEPTIAHQKLKAKPLSDEEIDALEAFLKTLTDERYRK"
     gene            complement(11144..12133)
                     /locus_tag="PXB09_000975"
     CDS             complement(11144..12133)
                     /locus_tag="PXB09_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5233110.1"
                     /translation="MNDLIIYNTEDGKSNVALLVVENEAWLTQNQLAELFDTSVQNIS
                     EHIKNILKDKELDENSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRK
                     WANSTLRTYLEKGFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKL
                     SSDYDKTDKNTQMFFAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRK
                     GDIVIAKNYLDNNELDSLNRLVMIFLESAELRVKNNQDLTLGFWRRNVDMLIEFNGFS
                     VLGNGGTITHKQMESFVREQYEKFDIQRKCLKQKEADWEDLQALEKLESELTR"
     gene            complement(12293..13657)
                     /gene="mpl"
                     /locus_tag="PXB09_000976"
     CDS             complement(12293..13657)
                     /gene="mpl"
                     /locus_tag="PXB09_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDL5233111.1"
                     /translation="MKKHIHILGICGTFMGGVAMIARELGYKVTGSDTNVYPPMSTFL
                     AAHGIEIIPNYDVAQLQPAPDLVVIGNAMSRGNPCVEYVLDNQLNYTSGPQWLHDHLL
                     KDKWVLAVSGTHGKTTTTGMLAWILDQNGIDTGFLIGGVAGNFGISARAGNSPFFVIE
                     ADEYDSAFFDKRSKFVHYTPKTLIINNMEFDHADIFDDLKAIQRQFHHLVRTMPQSGC
                     ILSAIADQNVQDTLKMGSYSQLQFIGEQNEWFAKPLNADCSQFEVFHLGVKQGEVHWS
                     IIGKHNMHNALMAIAAAHHAGVEVQGACEALGKFVNANRRLEVKGEVNGITVYDDFAH
                     HPTAIEATIDALRGKVGKNQRILAVLEPRSNTMKMGVHKDEIAPSLHDAEAVFVYQPD
                     IIAWSVSEITNVLSQPAYWSANIDDLVDLVVKEAKPTDHILVMSNGAFGGIHQKLLAK
                     LADK"
     gene            complement(13953..14708)
                     /locus_tag="PXB09_000977"
     CDS             complement(13953..14708)
                     /locus_tag="PXB09_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDL5233112.1"
                     /translation="MKLKSFKPMFMLLSVAFLTACSSSINPETGVRDDPLEGFNRAMW
                     KVNYDYLDPYVLKPVAKGWKEYVPSPVKTGLINVANNLDEPVSFVNRLIEGEGKKAMV
                     HFNRFWINTVFGLGGLIDWASLDEGLRLNNGQRGLGESLGAHGVPSGSYIMMPAYGAT
                     TPRQGIGSAVETGYSVLTYVGSPWSIAKFVVQGVDTRSKLLEQDALLEQAQDPYVTFR
                     EAYFQNLEFKVKDGNVEQSQQEQLSEEELKNID"
     gene            14863..15180
                     /gene="metJ"
                     /locus_tag="PXB09_000978"
     CDS             14863..15180
                     /gene="metJ"
                     /locus_tag="PXB09_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDL5233113.1"
                     /translation="MADWNGEYISPYAEHGKKSEQVKKVTVSIPIKVLEILTNERTRR
                     QIKNLRHATNSELLCEAFLHAFTGQPLPNDEDLMKDRADEIPEAAKQKMCELGIDPDE
                     WQY"
     gene            15228..15458
                     /locus_tag="PXB09_000979"
     CDS             15228..15458
                     /locus_tag="PXB09_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF997 family protein"
                     /protein_id="HDL5233114.1"
                     /translation="MYQQLTTEARWAVLLTLIYLLGWVGFAYFSPQGRGIFGFPIWFE
                     LSCIFLPVLFSLVATIVVKKVYKNIDLEVNNE"
     gene            15451..16875
                     /gene="panF"
                     /locus_tag="PXB09_000980"
     CDS             15451..16875
                     /gene="panF"
                     /locus_tag="PXB09_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDL5233115.1"
                     /translation="MNSEMILPLIAYLIFVFGVAFYAYRKRQGGSFISEYYIGGRSMS
                     GFVLAMTTAATYVGASSFIGGPGAAYKYGLGWVLLAMIQVPAVLLSLGALGKKFALLA
                     RKHNSVTINDMLLARYQNKFVVWIAGLALLLSFFAMMTVQFIGAGRLLETTLGIPYQT
                     AVMIFAITVGLYTFIGGFRAVVLTDTIQGLVMIVGTSILLAGVIYATGGVENAMHTLE
                     AINPQLTTPYGIDERPLDFTFMTSFWVLVCFGLIGLPHIAVRSMACKNSQALHRAMII
                     GTVVIAILMFGMHLSGVLGRAVVPDLKVPDQVIPTLMVQVLPPVVAGIFLAAPMAAIM
                     SSIDSMLIQSSSTLIKDLYLAIKPNAINNEKKIKLFSTITTLTFTVLLVFAALTPPEM
                     LIWLNLLSLGGLEATFLWVIVLGLYWEKANATGAIYSMLAGLSCYVLMTTFKIAIFSF
                     HAIVPSLLIGLIAFLIGNRFAPKV"
     gene            complement(16952..18142)
                     /gene="nhaA"
                     /locus_tag="PXB09_000981"
     CDS             complement(16952..18142)
                     /gene="nhaA"
                     /locus_tag="PXB09_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDL5233116.1"
                     /translation="MEKLKEFLKSEASGGVLLLVFAFAAIVCANTSLSDFYFEFLQTI
                     VSVQFGEFALNKPLLLWVNDGLMAVFFTLVGLEVKKELFEGSLSSYKKAIFPAIAAVG
                     GMIVPAIIYWAINQNHPEYHNGWAIPMATDIAFAVGIVALLGTRVPLALKAFLLALAI
                     IDDLGAIVVIAIFYSQEISVQALTIAAIAIIGLVLLNRFKVTSLCAYLVVGLVLWTSV
                     LKSGVHATLAGVIIGFCVPLKGKHGERPAEELEHILAPWCAYMILPIFAFANAGVYLL
                     EMGMEQLSSPLPLGIALGLIIGKTLGVFGFSYLAVLFRLASLPQGVNFKQIFAIAVLC
                     GIGFTMSMFLASLAFDVSEAGESITALARLGILLGSAVSAILGYTLLRMATKQNNPEN
                     NATY"
     gene            18310..18738
                     /locus_tag="PXB09_000982"
     CDS             18310..18738
                     /locus_tag="PXB09_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5233117.1"
                     /translation="MTHDWLYWALASALFAALTAIFAKVGLQGVDSDFATFIRTVVII
                     IALIAFLTYSGKWQPLDSLSSKNWLFLILSGLATGLSWSAYFKALQMGNASQVAPIDK
                     FSLVLVTLFAVIFLGERPSGQDWLGIGLVAGGVLLLAFKR"
     gene            18744..19466
                     /locus_tag="PXB09_000983"
     CDS             18744..19466
                     /locus_tag="PXB09_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDL5233118.1"
                     /translation="MQNFANIEIAFIHRKAPLPSDFSYPEMPGGLTEKQVQKWQSRRV
                     AFFLLTELFKKHHLDLDLLADMQRSPSGRTFVDSEQIDFNISHSGEWIAVIFSYSFAK
                     LAVGIDIEHPQKIRRYHDLICHYGNAEEQNVLLANHSPILSNLAERFYLSWCLREAIL
                     KSQGVGIVKLSEVKHLPLEKQIFSAHCPKGKLHFVSELPFYLSYFYQQPQNMLLSEPL
                     LYHWQNGQFQPIKCQSLVYDVN"
     gene            19476..19895
                     /gene="psiE"
                     /locus_tag="PXB09_000984"
     CDS             19476..19895
                     /gene="psiE"
                     /locus_tag="PXB09_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDL5233119.1"
                     /translation="MPKKSLEEHHSSFGKIASETFQWIMNIALLVTGALLSYSLFAEA
                     YSLYELSFSDSEKFQIVEKIVIFFLYFEFLALIVKYFKSNYHFPLRYFLYIGITAMVR
                     LIIVDHSNALHTLLFALSILVMIIALYIVHTDRLHKS"
     gene            19904..>20504
                     /locus_tag="PXB09_000985"
     CDS             19904..>20504
                     /locus_tag="PXB09_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDL5233120.1"
                     /translation="MKLTQYQHNDLQILNRETVYKGHFELQKITFRHKLFSGEMSGEV
                     VRELLIKGEAAALIAYDPTLDKVVLIEQVRIGAYDAGQKKSPWLLELVAGMVDKGNEE
                     PAEVAMREAKEEAGLEVTTVQHALSVWDSPGGQLERLHLFLGLIDSTQVKSGEVHGLL
                     EEENEDILVHVVSREQAYQWVEDGTIDNVIAVIGLQWLQL"
BASE COUNT         5814 a         4565 c         3836 g         6289 t
ORIGIN      
        1 tggcacagag gttttacctg taattgctcg tacagaaatt gtgcttgcat cacgacctaa
       61 cacaatctcc tcaaaagtat agccttgctc ttttaataat gcttttgctt ttgcacagaa
      121 caggcaaccc ggtttagtga taatcgaaac agactcttta gctgtccaat ttggacttaa
      181 atatttaatc attgtatcgg catctgatac tttaaacgga tcgcccggtt cttgtggctc
      241 aataaacatt ttttccacaa taccgttttt caccagcatc gaataacgcc aagaacgttt
      301 accaaaccca aggtcatttt tatcaactaa tagccccata ccttctgtga actcaccatt
      361 accatcagga ataacagtaa tattttcaga ttcttgatct gctttccaag cgttcattac
      421 aaaggtatca ttaactgaca tacagatgat atcatctacc cctaatgcct taaattcaca
      481 agctaattca ttatagcgag gcaaatgtgt tgatgaacaa gtcggtgtaa atgctccggg
      541 taatgaaaac acaaccaccg ttttgttatt aaataactca tcggttgtga catcaaccca
      601 agcatcgttt tgacgtgtac gaaatgttac actgggtact ttctgacccg tcatatcttt
      661 aaaagacata ttaatgttct cctatagaat tatatattac aaaaatctta ggcattatac
      721 tcacaaatat ggcataattc agcctatcag aacaatagga aaaatttaaa ttggaggaat
      781 caagtgaata ttcgagattt agaatacctt attgcacttg cagaacataa gcatttccgt
      841 cgtgcagcag aatcttgtaa tgttagccaa cctactttaa gcgggcaaat tcgcaaatta
      901 gaaggcgaac taggcactat tctgcttgaa agaaccagtc gcaaagtcct ctttacgcaa
      961 gcaggcttaa cattagttga acaagccaag gtagttttac gtgaagtaaa aattctaaaa
     1021 gaaatggcaa gcaaccaagg taaagagatg tctggcccgc ttcatgttgg tgtaatccca
     1081 accttggggc cttacatttc gccaattatt gtgcctgcat taaaagcaga atttgcagat
     1141 ttagagctgt atatttacga attacaaacc aaccaattat tagatcaact tgaatccggc
     1201 cagcttgatt gtggcattat ctcatttgta aaagagagtg aatcttttat tgaagtgcct
     1261 atctttaatg aagaaatgta cttggtagtt ccagaacaac acgaatgggc agcgcttaaa
     1321 aaattcgata tgaatttatt aaaaaaccgt gagttgctct ttttagacag tggccattgt
     1381 ttacgcacta atacgctaga ctattgtcta tccattggag caaaagaaaa tccacacttt
     1441 aaagctacca accttgaaac cttacgcaat atggtagcag caaatgttgg cctagcattg
     1501 attcctaaat tagccgctaa accgattaaa ggagtacatt atattccact tgaaaacccg
     1561 aaaccgtttc gagctgtggg aatggtgtat cgaccaggtt caccattacg cgcccgctat
     1621 gagcgtttag ctcaagccat tactaaaatt atgcaatccg aggcgtaaaa atggcaaacg
     1681 gtatgagtgt gcgcgcaatt cagaaagaaa aaacacgcag agcattagta gaagccgcct
     1741 ttaatcaatt aagctcagaa aaaaatttct ctaatctcag tttgcgtgaa gttgcacgtg
     1801 aagctggagt cgcaccgact tcgttttacc gccactttaa agatatggac gaactaggct
     1861 tagcaatggt ggacgaatcc gggctactat tacgccaatt aatgaggcaa gctcgaaaac
     1921 gaattgcaaa tggcggaagt gttgtcgtgg tttcagtgga aacattcttc gaactgattg
     1981 ccgaccgccc taacgttttc cagctattac tacgcgaaag ctccggtaca tcgcaagcgt
     2041 ttagaaccgc agcatcacgc gaaattcaac attttgtagc tgaattggcg gactatatta
     2101 tgagcaaaga taatcacagt aaccgagaac ttgcttatat tcaatcggaa ggtttagtca
     2161 cgctagtatt tactgccggt tctcatgctt tggatatgaa caatcaagaa cgggaaaaac
     2221 taaagcaacg tgtcattatg cagctaagaa tgctgattcg tggctccacc tattatgcca
     2281 ataaacaagc ttcatcaaca taaaaaaaca gacgcctaag cgtctgtttt tattctttcg
     2341 taatatatgc agtcgatagc tttaaccatt ctagtgctaa ttgatgatgt tcagataacg
     2401 cattccataa cgcatcttct gacaagatac tataattgcc tttagtatct aactgttcat
     2461 caaaactatc atgtaattca cgccattccg ggctagcata aaaccgactt aagggttcca
     2521 aaagtgcaga agctcgtttc cattgctcaa tccccttttc caattctggt aatagctcta
     2581 cccattggtt ataacaatcc tgcattttct gaatatctgc ttttttcatt ctttaccgct
     2641 tacaccataa attttagcct caatataaca taaaaatccc cttccgaaga aggggatttc
     2701 aactcaatta ggctaaatta ccactggtat ccaacgccta caccgccacc aaagtcgcct
     2761 cggctattcg cattaccttg taatttcaag ataagcttac cgttatcact tgaacgtgaa
     2821 taacctactg caagcgcgtt ttcaccttta aatgtaccac ctgctgcagc caccatagat
     2881 ttacctggaa tgtaaacctg cggtaacgct gctgctgcat ttgaaccggc aataccagca
     2941 cgggcttcac ggttattacg atggatcttg ttatttaagt gattaacagc accttttaac
     3001 tgaccaacat taacagcatc ggtatctgcc tcacctgctt taacattagt aatacggtta
     3061 ccaccattat ttaagccatc tttcgttaag cttaccgctt ttcctgcaga gccattatta
     3121 atggttacgc cattattgtt caccaatgta tcaccagtct tgctagtaaa ttcaggggta
     3181 tctgaaacgg ctacagttac atcagaacct ttacgtgtca ctttgatatt attacctgca
     3241 ttcacgctca ctgtactacc tgcttttact ttcgcagggg ctttatcccc ttcaaccgca
     3301 cctgtaccaa ctgctttaga atctacgttc cagcttacgt tgtttacggc atttgctact
     3361 gttgttgcat tcacaaagcg tgaaccggta ccgttaggat cttgaacatt gattttgccg
     3421 ttatcagcaa cggttaaatc tgtgatgttt acgttcactt tcacctcacc agccttatca
     3481 ctggtaatag ttgtaccatt accatttacg atattgatag aaccatcttc atcagtacca
     3541 atgttattac cattcacttt cgcatagttg ttcagctgtt taccgttgat aacatctgtg
     3601 cttactgggc taatatcgcc atctgctaca ttagtgatct tagttggttt accgtcttta
     3661 tcaccgactt tgatgttatc accatcatta gtgattttcg gaccattctc actgaactgt
     3721 acgctattga agctcacatc ttttgctgtc gcaaaagtaa attgattacc atcacgttta
     3781 acagttaagt tatcacctgc ttcaaacaca acttcttcgc ccgttttcac tagcttagtc
     3841 gcagcttggt caccggcagc cttattacct gcagatttaa tattaaagcc tgcattattc
     3901 actgcatctg caacagtttg agcaatcaat aacgcatttg gctgagttgg tgctttcacc
     3961 gtaccatctt cgttgttacc taactcactg gtatttgcag tgatgttacc ttcattatct
     4021 actttaatag tagtaccgtc agttttcgct tcaacgttat aagtagttga accatcagca
     4081 ttcgtgctag gtgtgatagt tacacctcgg ttaccgccca ctttcgtagt agctgcatta
     4141 gttgccgctt gtaaatcacc taagttcact acgttgttta gcttgtcgcc ttcagcattt
     4201 ttaatcgctt ctgcacggtc tttaccctct ggggttgagc catcttcgtt acgaacacta
     4261 cttgccacat tgcctaattg aacaggggct tcacctgtga atttagccgt attgcttggc
     4321 gttgagctat cagtaggatc ttggtttaca aactcaatcg ggctatctac tttaatcgta
     4381 ttcttaccgt ctttgttttc aaccgtgacc gttgtacctt taccgttaat aaaatcaacc
     4441 gtgtcattat gtaccacagt atcaaccgct ttgccgttac cttgtaaatt ccagcctgca
     4501 tttaatacat cacctaatgt tgctgcatta cttaacttat cagctaagtt ggttggatta
     4561 ttgtctgctg gttgaacctt atcatctgca gtcacaggta tcagattaga cgcaacattg
     4621 ctaatcgctt tattacctgc attgatacca tctttattga tagtaattgg attatttgca
     4681 ggatctgctt catcagttgg tacagttaca gtgttagagg ttacgctgct aaacttaaca
     4741 tcatctttag tcgcataaat gactttacca tcagcttctt gcttcacagt taagttttta
     4801 cctgcaacca tttcaactgc tttacccgga ttaatcagtt catcaccacc tgaaagcttc
     4861 tctccacctt ctacagccga cgttttcaac gtaaagcctg agttattgat ggcgttggta
     4921 atatcacctg ctgtcactaa tttcttagca tcatcagcgg ttggttcatc aattctaccg
     4981 tcattatttg catcatttaa tgccgtagtg ttagccttga tcgcaccggt tgtaggatct
     5041 tttacaattg ttacatcgtc cgtattcaca gaaagatcga acacattcgc gccatcagca
     5101 ttttttgtcg tgttaaccgt aactgattta tcagtcgact tcacttcttc acgagatgcc
     5161 atagcgaaag tataaagctg actaccattt actgcatctt tactatctgc atttacgtca
     5221 ccggcagcta cattagttac tttgactgca ttaccgtctt tgtcaccaac attgatatta
     5281 ccaccattgt tagtaatctt aggaccttca tttccgaact gtacactatc aaaattcaca
     5341 ttttttgcag ttgaaacagt aatgttattc ccatcacggg taatctcaat gtttttacca
     5401 tttaagaact gaaccgtatc acctgttttc accaggctct tctcgtcacc gtttgcttta
     5461 atgttaaaac ctgcattgtt aattgcatct gcaacggttt tagctgttac taatgcattt
     5521 ggttctgtag gctcttccac tttaccatca gggttatttg ttaactcgct ggtgtttgcc
     5581 gtgatttcgc ccttatcgtt taccttaatg gttgtaccat ccgtttttgc ttcaacggta
     5641 taagtggttg agccgtcatc gttagtttta gatgttacag taacaccttt atcaccttcc
     5701 actttggtgg ttgctgcttt cattgctgct tgtacatcac ccacattcac agcattattc
     5761 aacgtatcac ctgttgcgtt gttaatatta tccgcaatcg ctttacgctc tgcatctgtt
     5821 ggtgctgctt tatctgcaaa tgtaccaccc acgccgctct tcagattagt gattgagcct
     5881 gttgtatctg gtttaccatt gctcatatca atgctgttga atgcaacatt atctttcgtt
     5941 gtgtaagtga atttaccgtc agcttgggta agtgtcatat ttttacccgc atcaaaggta
     6001 actgtttcac ttggcttgat tagctgtgtt ttcttacctt tggtttcacc accatcaaca
     6061 ccatcacctg ctgttacatt aaagcctgaa ttattgattg cattagcaat atcacctgcc
     6121 gtcactaatt tcttagcatc gtcacctgta ggctcagtaa ctttaccttc aggagaatta
     6181 tttaatgttg tggtattcgc tttaacttcg cctgttgtcg gatctttcac gatagtaacg
     6241 ttgtcagtat tcactgtcat attaccgtca ttatcacgac cgatagattt atccgttgca
     6301 acatctaccg tatattcagt attgccttta tcatcttcct ttccggcttt aacagttacg
     6361 gctttagaac cagctactac agatgaggtt ttctctgaat tattaattgc atcagccaca
     6421 ttaccacgag ttactgtagg agcacctgct ttcgctacat ctaccgtata gattgtttga
     6481 ccattatcac ctgtttcagg tgcaccaaca gttgctaaac ctgaaccttt cacttcggtt
     6541 ttgtgacgct gctgcttgtt ttaactgact tacattcacc gcatcagtat cagcttcacc
     6601 tgctttcacg cctgtaattt tggttggatt accatcatta cctgcaatat taacattacc
     6661 atctttattc gtgattttcg ggccattatc accaaatgtt acgctatcaa atttcacatc
     6721 tttcgctgtt tcgtacgtga atatagtgcc aacacgttta acttttaagt tatcgcctgc
     6781 tgcaaaaatc actttttcgc ccggattaat caactctgct gcttcttgat caccatcagc
     6841 tttattgcca ccagattttg cattccaacc tgctttttga atcgcttcag aaactgtttt
     6901 tgtagttgca actttatctt cttctgcagg tgtagttact gcacctgttg tgttatcaac
     6961 cgtgatagaa ccggtatcca catcaaaggt tactttacgc catcagcttc ttgtgtaaca
     7021 tttgaaactg tacctttacc gtttacaaat tgtacagatt catttggggt cactgtgcct
     7081 ttggtttcac ccgcattatc tttaatattg aaaccttggt ttacatagtt atttaagttc
     7141 gtaattgcat cgccaacgtt tgttgcagta ttaccatact gagttccagc tgcattcgtt
     7201 acattatatt taggctgagt cacagagcca tccggattca caacagaacc gccaccaaaa
     7261 ttatttgcag ttgaatttgc aaggttactg gttgcattca ttgccatata aagttgtgaa
     7321 ccattaatcg catcggttga tgtagcagaa atctgacccg ctgccacatt ttggatttga
     7381 cgctctttac ctgcagagcc tacagaaaca acatagttag tatctttatt taccccggca
     7441 aagccattat aagtaatacc ccctaccgtt gcattttcag ttggtgttgc tgcccttacg
     7501 actgattcgc tacccaaagc aacagaacta ttcagagtag cttgagctcc catacctaat
     7561 gctgtagcaa attgagctgt tgcattagca cgtgtaccaa cagccactgc tgattgtgct
     7621 gaggcaattg aatttgcacc tacggctaaa gaggcatttg cactcgcatt tgctgcaaca
     7681 ccaaaggcag aagctttttc agccgttgca ttagcattag aacctaccgc tgtagcatca
     7741 cctgctgtcg catttgtttg gcgaccaagt gcggttgtac cattagccgt tgcatttgct
     7801 gaatgaccaa ctgccgtagc ttgaatacct tttgaaaccg tagcaacacc taaagataac
     7861 gctccgttac catttgcatt tgagtttgtg cctaatgcta ctgccgcttg ctctccacct
     7921 gttgccgttg cattcgggcc gatcgcaatt gagtttctgc tcttcgcgcc atcattagct
     7981 tgattctcag gtacggttga attcacagag aaatattgaa tttggcttgc ttgcgcagga
     8041 atattgacag aaagatcata aataaccgtg ccatttgcat ttctctctgt actttttaca
     8101 gttactgtac catcgtttga aacaacagta gcttgggtat ctttcgtaaa gtcatcaatg
     8161 gctttcttag ttaaaccaat ttcatagtta gttgtattcg cagcagttgc agctttacct
     8221 gttacagtaa tgtaatcagg gctagaagaa tttgccgtgg tgttatacgc atttactgta
     8281 taaatagttt gcccatttgc accggttgca tttgtaatat taacattgct acctgcaaca
     8341 acttctgttt ttaccgcttt taatgcttct tcaatcgtat ttttatttgt tccaccaata
     8401 ttagtatagg taacagaacc atcaggcttt actgtagcat taccacctaa aatattttta
     8461 gttgaattag caaggttacc tgttgcgttc attgccatat aaagctgtga actattaatt
     8521 gcatcggttg atgtagcaga aatctgaccc gctgccacat tttggatttg gcgtttgatc
     8581 gtgtttgagc caacagaaac aacattccct gctgccgtag tattagccgc aaagccggaa
     8641 taagtaatac catttaccgt cgcagaagga actgccacag cgttggaaac ggttgaatta
     8701 ctccctaaag caaccgaatt atttagcgct acattagcac ctgagcctaa ggcaatagca
     8761 aaaccggcac ttgctttagc actatcacca attgcaaccg tagattggtt ggaagatact
     8821 gcacttaccc ctaaagctgt cgcattaaca cctgaaactg tcgcattata accaatcgct
     8881 gtacctctag ttgcagtaga agttgcatta gcattagcac ttgaacctaa agctaaagaa
     8941 taagtagcat ttgcaacaga cttatccccc attgcacctg aacccattgc aaatgaacga
     9001 gtgccactag cggcagatct ccatcccatt actgttgaac ggttaccagt agctagagct
     9061 cctgcaccaa aagctgttgc acggttacct gttgcagcag tatccgtacc taatgcaata
     9121 gcatttgctg aagtcgctct agcccccata ccaatagcaa tagaaggaac taatgcccaa
     9181 ttctgaccag tgttattgag actctctaca ccaatattat agtaatgtaa gaagtatctt
     9241 ctggatccac taaatttgtt ctatgcgttg cattcgtatc tgtaccaatt gcaatagtag
     9301 atctgccagt tgagattgaa tccgcaccaa tagcaattgc gttctccgat gatgcagttg
     9361 cttgtgttga aatataatta cttgttgttg aacctataag atacaacagc cacagcatca
     9421 ttagctccca acacggcact agctccagcc aataaagcca atgttgcctt acttgcagaa
     9481 ctaacagatt tcgttttacc tttcgctcgt tgtaattcag atactgcaac ccaactttgt
     9541 gttgcctgat tccaaataac tttaaaaatt tgattcataa tcgaccctat ataaaaataa
     9601 aaaagattac gtagaaccta tgttcaacat aatcttcacc aatataaaaa accgccacct
     9661 atttaagtga aataacttac ttatagactc agaaatttaa gtgcgcgtat tttacgctat
     9721 ttgtaatata attcatcttc tggagtgtaa atttattgta aataatacga ggaatctaac
     9781 cgcttgttat aacgcaaaac accttgactt aaatcaagcc actacctcat tttgagggga
     9841 gatttatacg cagtgaaatt ttaaaataag ctaaggttta cggataatcg ttcaacacta
     9901 ttgaattatc actgtagtta tcgttaaaaa ggtatgcttt tatgaaccaa ttcttccctc
     9961 taatctttag cttaactcta ttttccggcg taactttggc actagaaaaa gcacctcgaa
    10021 ctatgccgac agaaggaata aataagcccc tacttggaca aattctattc tttgacaata
    10081 tgctgtcaca caacggttca caaaactgct ccagctgcca taatccggat tatgccttta
    10141 ttgataaccg cactactccg gcaaaagggg tggtttcaca aggagatact ccaaccaaat
    10201 tcggcaaacg caactccccg accatgcttt atgcgaaata ctcgcctgag ttccactttg
    10261 atgagcaaag tcaagaatat atcggcgggc agttctggga cggacgagcc aaaaatctcg
    10321 ccgagcaagc cggtatgccg cctatcgacc caaatgaaat gggaatgcct aacaaattag
    10381 aagtagccaa aagattatat aatgtgccga tgtatcagcg atttttaggg caattttacg
    10441 gtgaaaaggt atgggaaagt tatgaaagcg tttatgcggc aatggaagat gcgattgcga
    10501 cattccaaca agaaaacaaa cttctcgctc catttgattc aaaatatgat ctatttttaa
    10561 aaggcgaggt acaattaact gcattggaag aaaaaggcag agctttattt ttcaataaag
    10621 ctcaaactaa ttgtagtagt tgccaccaat tacagagtgc tgcaaaccac caagaagaaa
    10681 cctttagcaa ctatcactat tacaatgtag gcgtacccgg taacccagac ttgatagcgg
    10741 ttaacggctt cgcaccagac ttcgtcgatt taggcttatt tgaaaaccca aatgttaaag
    10801 gtgatgaaac acaaaaaggc aaattcaaaa ccccaacatt gcgtaatgtt gccgtgactg
    10861 cactttatat gcacaacggt gtgtttaaag aattaaagac tgttttgctg tttttagaca
    10921 gctacaataa cccggagcga aaaatcaacc ctgaaaccgg cacggcgtgg caacaagcag
    10981 aatttgaacc cactatcgcc caccaaaaac tcaaagccaa acccttaagc gatgaagaaa
    11041 ttgatgccct cgaagcattt ttaaaaacct tgacggatga gcggtataga aaataaggct
    11101 acaagcggta aaattttggg gaaattttac cgcttgcgtt taactaccgt gttagctcac
    11161 tttctaactt ttccaatgcc tgcaaatctt cccaatctgc ctctttctgt tttaaacatt
    11221 tacgctgaat atcaaatttt tcgtattgct ctctgacaaa gctttccatt tgtttatgcg
    11281 tgattgttcc accatttcct aatacagaaa agccgttaaa ctcaatcaac atatctacat
    11341 ttcttcgcca gaaacctaac gtaagatctt ggttgttctt cacacgtaat tcggcacttt
    11401 caagaaagat cattaccaag cgatttaaag aatccagctc attattatct aaatagtttt
    11461 tcgcaatcac aatatcgcct ttacgcacga cttttccttt ccagctagtt aatcccatat
    11521 tcatcttagt cgcatcagca cgttgacaaa tcaactcagc ggcagtgtgt ttggttattg
    11581 cataaatgag cttattttgc gtttctgcaa aaaacatttg cgtattttta tctgttttgt
    11641 cgtaatcgct agagagtttg aaaagctctc gtactttttg atagaaacgc aattcacttg
    11701 cccgaatctc acgaatctgt tcaagtaatt catcgaaata atctaaacga ccctgcggat
    11761 ttttcaaacg ctcgctatca attaaaaaac ctttttcgag ataagtgcgt aatgtgctgt
    11821 ttgcccattt tctaaactgt actgctcttg ggctacgaac tcgaaaccct atcgccagaa
    11881 tcatttcaag tgaataatgt tttacttgat aattcttgcc atcttgagca gttatcaagt
    11941 aatccttgat aactgaattc tcatctaact ctttgtcttt taagatattt ttaatgtgtt
    12001 cggatatatt ttgcacagag gtgtcaaaaa gttctgcaag ttgattttgt gtcagccaag
    12061 cttcattttc aaccactaac aaggctacat tgcttttgcc gtcttccgta ttataaataa
    12121 ttaaatcgtt catattttat tctgtttatt ggtagagata ttagtcgcta ttttcaataa
    12181 aacatgtata aatatccaga attgattttg aatttttcga tgcagatcac aaaaatagag
    12241 agttatacaa acaagcggta aaattttgta aaaaatttac cgcttgtaaa ggttacttat
    12301 cagctaattt ggcaagtagt ttttgatgaa taccgccaaa ggctccgttg ctcatcacta
    12361 agatgtgatc ggtgggtttg gcttctttga cgactagatc gactaaatca tcaatatttg
    12421 ccgaccaata cgccggttgc gataacacat tggtaatctc gctcacactc cacgcaataa
    12481 tatcaggctg gtaaacaaac actgcttcgg catcgtgtag gcttggggct atttcatctt
    12541 tatggacacc cattttcatt gtatttgaac gaggctctaa cactgccaaa atgcgttgat
    12601 ttttgccgac tttaccacgc agagcatcaa tagtcgcttc tatcgcagtt gggtggtgag
    12661 cgaaatcatc ataaacggta atgccgttta cctcgccttt cacttccaaa cggcggttag
    12721 cattcacaaa cttgcctaat gcctcgcaag ccccttgcac ttcaacccct gcgtgatgag
    12781 cggcggcaat cgccatcaga gcattatgca tattgtgctt gccgataatc gaccaatgca
    12841 cctcgccttg tttaacgcct aagtgaaaca cctcaaactg tgagcaatcg gcatttaacg
    12901 gtttagcaaa ccattcgttc tgttcgccaa taaattgaag ctggctgtaa ctgcccattt
    12961 ttagtgtatc ttgcacgttt tgatcagcga ttgccgacaa aatacagcca ctttgtggca
    13021 tcgtgcgaac aaggtggtgg aactggcgtt gaatcgcttt taaatcatca aaaatatcgg
    13081 cgtggtcaaa ttccatatta ttgataatca gcgttttcgg ggtgtaatgc acaaatttag
    13141 aacgcttatc aaagaacgca gaatcgtact cgtccgcctc aatcacgaag aatggactgt
    13201 taccggcacg agccgaaatg ccgaaattac cggcaacacc gccaattaaa aagccggtat
    13261 caatcccatt ttggtctaaa atccacgcta acattcctgt tgtggtagtt ttgccgtgcg
    13321 tgccggaaac cgccagcacc catttgtctt taagcaaatg atcgtgcaac cattgcgggc
    13381 cggaggtgta attgagttgg ttgtccaaca catattccac gcacggatta ccacggctca
    13441 tcgcattacc aatcaccact aaatcaggag ccggttgcag ttgagcaaca tcgtaattcg
    13501 ggataatttc aataccgtga gcagctaaaa aggtactcat cggtgggtaa acattagtgt
    13561 ctgagccggt cactttatag ccaagctcac gggcaatcat tgccacaccg cccataaagg
    13621 tgccgcaaat gcctaaaata tggatatgtt ttttcatctt tttatattta aaatgttaga
    13681 atcatcccct ctccccttgt gggagaggga tagatttttt cttcgtgcag aagaaaaaat
    13741 cagggagagg ggtaagcggt catttttagg cttaatattg taagctccct ctctctgaaa
    13801 aatatttctg aacgaaatat ttttcggtct caatactcgc tacgctcgct cctgtggagc
    13861 cgttggcaaa gccaacgttc aaatgtaaac atttgtccca caaggggaga ggtgcgcttt
    13921 agatgaggcg taccatccct cgttcacatc aattaatcaa tattcttcaa ctcttcttcc
    13981 gaaagctgct cttgttggct ttgctcaaca ttgccatctt tcactttaaa ttcaaggttt
    14041 tggaaataag cttcacggaa ggtaacataa gggtcttgag cttgctctaa caacgcatct
    14101 tgttctaata atttagaacg ggtatctacc ccttgtacca caaatttagc gatagaccaa
    14161 ggtgacccaa cataagtcag caccgaataa ccggtttcca ccgcactacc aataccttga
    14221 cgaggtgtgg ttgctccata agccggcatc ataatatagg agccggaagg cacgccgtga
    14281 gcgcctaaac tctcacctaa accacgttgt ccgttattta aacgtaaccc ctcatctaaa
    14341 ctcgcccagt caattaaccc acctaaacca aacacagtgt tgatccagaa gcggttgaag
    14401 tgaaccatcg cttttttacc ttctccttca attaagcggt ttacaaagct caccggctca
    14461 tcaaggttat tagcaacatt aattaagcct gttttaaccg ggcttggtac atactctttc
    14521 caacctttag ctaccggttt taacacataa gggtctaaat agtcgtaatt gactttccac
    14581 atcgcacggt taaacccctc aagtgggtcg tctcgcacgc cggtttctgg gttaatgctt
    14641 gatgaacaag cggttaaaaa tgccacactg agtagcataa acatcggttt gaacgacttg
    14701 agtttcataa attgaacctt ttgcagagaa atttgtccat tgtagcgaag ttgataaaaa
    14761 atacaaaaca aaaagccgtt ttgcctctag aaatctagac gtctagattg agatatagtt
    14821 cgcttttgat tacaatacag gcaacattta aggagcaaac aaatggcaga ctggaacggc
    14881 gaatatatta gcccttatgc cgaacacggc aaaaaaagtg aacaagtcaa aaaagtgacg
    14941 gtatccattc caattaaagt attggaaatt ttaactaatg agcgaacccg tcgccaaatc
    15001 aaaaatcttc gtcacgcaac caacagcgaa ttattgtgcg aggctttttt gcacgccttt
    15061 accggtcagc ctttgccgaa tgatgaagac ttgatgaaag acagggcaga tgaaatccct
    15121 gaagcggcaa aacaaaaaat gtgtgagctg ggaatagacc cggacgaatg gcaatattag
    15181 acacaccttg caactgcgag gttcttttta tgttttaagg agactttatg tatcaacaat
    15241 taacaacaga agcacgttgg gctgtgttgc ttacgctgat ttatctgctc ggctgggtag
    15301 gttttgctta cttttcaccg caaggcagag gcattttcgg ctttccgatt tggtttgaac
    15361 tttcttgcat tttcttaccc gtactattta gcttagttgc caccattgtc gtcaaaaaag
    15421 tgtataaaaa tatcgatctt gaggtgaata atgaatagtg aaatgatttt acccctgatt
    15481 gcttatttaa tttttgtgtt tggcgtagcg ttttatgctt accgtaaacg ccaaggcgga
    15541 agctttattt cggaatacta tatcggtggg cgttcaatgt cgggctttgt gttagcaatg
    15601 acaaccgccg ccacttatgt gggggcaagt tcctttatcg gtgggccggg tgctgcctat
    15661 aaatacggtt taggctgggt gttactggca atgattcaag tgcccgcagt gctactctct
    15721 cttggagcat taggcaaaaa atttgcctta cttgcccgca agcataatag tgtcaccatt
    15781 aacgatatgt tattagcccg ttaccaaaac aaatttgtgg tttggattgc aggactagcc
    15841 ttattacttt cgttttttgc gatgatgacg gtgcaattta tcggtgccgg tcgcttactt
    15901 gaaaccacac tcggaatccc ttaccaaaca gcggtaatga tttttgccat cacagtcggg
    15961 ctttatacct ttatcggcgg ttttagagcg gtggtgctaa ccgatactat tcaaggttta
    16021 gtaatgatag tcggcacaag cattttactc gctggtgtga tttatgccac aggcggagtg
    16081 gaaaatgcaa tgcacaccct tgaagccatt aacccacaac ttaccacccc ttacggcatt
    16141 gacgaacgcc cgcttgattt cacctttatg acttcatttt gggtattggt ttgctttggt
    16201 ttaatcggct taccgcatat tgcggtcaga agtatggcat gcaaaaacag ccaagccttg
    16261 caccgagcaa tgattatcgg cacggtagtc attgcaattc taatgtttgg aatgcacctt
    16321 tcaggcgtat taggcagagc ggttgtgcct gatctcaaag tgccggatca agtcattcca
    16381 acactaatgg tacaagtgct accaccggtg gttgccggta ttttccttgc cgccccaatg
    16441 gcagcgatta tgtcttcgat tgactcaatg ttgattcagt cgtcttcaac cttaattaaa
    16501 gatctctatc tggcaattaa gccgaatgcc attaataacg agaaaaaaat caaattgttc
    16561 tccactatta ctactcttac ttttacggta ttactcgtgt ttgccgccct aaccccgcct
    16621 gagatgttaa tttggctgaa cctactctct ttaggtggtt tagaagcgac tttcctatgg
    16681 gtaattgtac tagggttgta ttgggaaaag gcaaatgcca ccggtgctat ttactcaatg
    16741 ctggcaggct taagttgtta tgtattaatg actaccttta agattgctat ttttagcttc
    16801 cacgccattg tgccttcact gctaattggt ttgattgctt tcttaatcgg caaccgattt
    16861 gctcctaagg tgtaaaataa aataggcata gtggtatgga agttcactat gcctattttg
    16921 caaaatttcc gctcaattca accgcttgta gttaataagt ggcattattt tctggattat
    16981 tctgcttagt cgccattcta agtaacgtat aacctaaaat cgctgaaacc gcagagccga
    17041 gtaaaatacc taatcgagct agagcggtaa tactttcccc agcctcactt acatcaaagg
    17101 caagacttgc taagaacatc gacattgtaa aaccgatacc gcatagcacc gcaatggcaa
    17161 aaatttgctt aaaattaacc ccttgcggca ggctggcaag gcggaataat actgctaaat
    17221 aactaaaacc gaatacacct aaggttttgc cgataattaa gccgagcgca atacctaacg
    17281 gcaatggtga tgagagttgc tccattccca tttctaataa gtaaacgccg gcattagcga
    17341 aggcgaagat cggtaaaatc atataagcac accaaggggc aagaatatgt tctagctcct
    17401 ctgccggtcg ttccccatgt ttacctttca gcggtacgca gaagccgatg atcacgccgg
    17461 caagggtagc gtgaacccct gattttaaaa cggaagtcca tagcactaag cctactacca
    17521 aataagcaca gagtgaggtc actttaaagc ggttaagtag cactaagccg ataatcgcaa
    17581 tcgcggcaat agttaaggct tgcacactga tttcttgcga atagaaaatg gcgattacca
    17641 caatcgctcc tagatcatca ataatcgcta atgccaacaa aaatgccttt aaagccaatg
    17701 gcacacgagt gcctaataac gccacaatgc ccaccgcaaa ggcaatatca gttgccattg
    17761 gaattgccca accattatga tattcagggt ggttttgatt aatcgcccaa taaataatcg
    17821 ctggaacaat cataccacct actgctgcta tcgcaggaaa aatagctttc ttataacttg
    17881 aaagcgaacc ttcaaacaac tcttttttta cttccagccc caccaacgta aaaaacactg
    17941 ccattaagcc atcgttaacc cagagtaata gcggtttatt caaggcaaat tcaccaaact
    18001 gtacactaac aatcgtttgt aaaaactcaa aatagaaatc acttaaggag gtgttggcgc
    18061 acacaattgc tgcaaaagca aaaaccagaa gcaatacgcc tcctgaggct tcagatttta
    18121 aaaattcttt taatttttcc acttaacttt ctcctattaa tatttgttta ttgtattttc
    18181 atttctatac attccatctt ttaccaaaaa ttttgcgaag atcaaataga aaatttgata
    18241 aactagaact aactcgcatt ttattgctcc atatgattag aaattaacct aaaatattaa
    18301 aattttgtta tgacacacga ttggctctat tgggcattag cctctgcact ttttgcagca
    18361 ttaaccgcca tttttgccaa agttggctta caaggcgtag attctgattt cgccactttt
    18421 attcgcacgg tagttattat tattgcactt attgcctttc tcacttacag cggaaaatgg
    18481 cagccgttag atagcttgag cagcaaaaac tggctgtttt taatcttatc cggcttggca
    18541 acaggattgt cttggtcggc gtatttcaaa gcattgcaaa tgggtaatgc ttcccaagtc
    18601 gctccaatcg ataaattcag cttggtgtta gttacccttt ttgcagtaat tttcttaggc
    18661 gaacgcccaa gcggacaaga ttggcttggc attggcttag ttgctggtgg cgtactgtta
    18721 cttgccttca agcggtgatt tttatgcaaa attttgcaaa tattgaaatt gcgtttattc
    18781 atcggaaagc acctctgccg agtgatttct cctaccctga aatgcccggc ggtttaactg
    18841 aaaaacaggt gcaaaaatgg caaagccgcc gagtcgcctt ttttctgctg acggaattgt
    18901 ttaaaaaaca ccatctggat ttagatttat tagctgatat gcaacgctcc ccaagcggtc
    18961 gcacttttgt cgattctgag caaattgact ttaacatcag ccattcaggg gaatggatag
    19021 cggtcatttt ttcgtattct tttgcaaaat tagcggtcgg cattgatatt gaacacccac
    19081 aaaaaatcag acgttaccac gatttaatct gccattacgg aaacgctgaa gaacaaaatg
    19141 ttttattagc caaccactcc cccattctaa gcaacctcgc cgaacgcttt tatttgagct
    19201 ggtgcttgcg agaggcgata ttgaaatcgc aaggggtggg gattgtgaaa ctgtccgaag
    19261 taaaacattt accgttagaa aaacagatct tttccgccca ttgtccgaaa ggcaagctgc
    19321 attttgtgag cgaactgccg ttctatttaa gctacttcta tcaacaacct caaaatatgc
    19381 tattatctga acctttgcta taccattggc aaaacgggca gtttcagcct ataaagtgcc
    19441 aatcacttgt ttatgatgtt aattaaggat aacgaatgcc taaaaaatct ttagaagaac
    19501 accattccag ttttggcaaa attgcttccg aaacctttca gtggattatg aatattgcct
    19561 tgctagtaac aggagcattg ctttcttact cgctgtttgc tgaagcctat tcactctatg
    19621 aactttcctt tagcgacagt gagaaattcc aaattgtaga aaaaatagta attttctttc
    19681 tctattttga gtttcttgcg ttgattgtga aatatttcaa atcgaattat cactttccgt
    19741 tacgctattt cctctatatc gggattactg ccatggtgcg tttgattatt gtcgatcatt
    19801 ctaatgcgtt gcatacacta ttattcgcac tctctatttt ggtgatgatt atagcattat
    19861 atattgtaca caccgatcgt ttacataaaa gctaggaact aatatgaagc taacccaata
    19921 tcagcacaat gatttacaga ttctaaaccg agaaaccgtc tataaagggc attttgagct
    19981 acaaaaaatc actttccgcc ataagctgtt ttccggtgaa atgagcggtg aagtggtgcg
    20041 tgaactctta attaaaggcg aagcggcggc tttaattgcc tatgatccaa ccttagataa
    20101 ggtagtatta attgagcaag tgcggattgg agcttacgat gcaggacaga aaaaatcccc
    20161 ttggttgctg gaattggttg ccggtatggt agataaaggc aacgaagagc cggcagaagt
    20221 ggcaatgcgt gaagccaaag aagaagccgg cttggaagtc acaacagtgc aacacgcctt
    20281 aagcgtatgg gacagtcccg gtggacaact ggaacgcttg cacctgtttc tcggcttgat
    20341 tgacagcacc caagtgaaat ccggcgaggt acacggctta ctggaagaag aaaatgaaga
    20401 cattttggtt cacgttgtaa gccgtgaaca ggcatatcaa tgggtagaag acggcacaat
    20461 tgacaatgtg attgcggtaa ttgggctaca atggttgcaa ttaa
//
LOCUS       DANLTI010000035        20071 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.035, whole genome shotgun sequence.
ACCESSION   DANLTI010000035 DANLTI010000000
VERSION     DANLTI010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20071
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.035"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            366..1730
                     /locus_tag="PXB09_000986"
     CDS             366..1730
                     /locus_tag="PXB09_000986"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005820549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDL5233121.1"
                     /translation="MTIKTPIQAVLASNQYFLDRQDAMESNVRSYPRKLPFAYQKAQG
                     VWVTDVEGNEYLDFLAGAGTLALGHNHPKLIQAVKDVLDSGLPLHSLDITTPLKDAFT
                     EELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNVIAFSGGFHGMTHGALSL
                     TGNLSAKNAVQGLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEHYFENFIEDVESGVVK
                     PAAVILEAIQGEGGVVPAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGKMFAFEHA
                     GIEPDIVVMSKAIGGSLPLAVLAIKKEFDAWQPAGHTGTFRGNQLAMATGYVSLKIMR
                     EENLAKNAQERGEYLTNALRELSKELPCIGNVRGKGLMMGIDIVDERQPKDATGAYPR
                     DCDLAVAIQKYCFKNKLLLERGGRGGNVVRVLCAVNITQAECEEFIKRFKQSVAEAVK
                     AVRG"
     gene            1820..3355
                     /gene="ddc"
                     /locus_tag="PXB09_000987"
     CDS             1820..3355
                     /gene="ddc"
                     /locus_tag="PXB09_000987"
                     /EC_number="4.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,4-diaminobutyrate decarboxylase"
                     /protein_id="HDL5233122.1"
                     /translation="MSNLEKHRQSLFCSDPKSIADYESAMNNAVKAVSDWLKEEKMYT
                     GGSIKELRAKINGFNPTQAGVGVQKSLEHLVEIFLKPSLKVHHPHSLAHLHCPTMVTS
                     QIAEVLINATNQSMDSWDQSPAGSIMEEHLIDWLRQKVGYGKGTSGVFTSGGTQSNLM
                     GVLLARDWAIANHWKKADGSEWSVQADGIPADAMQKVKVVCSENAHFSVQKNMAMMGM
                     GFQSVVTVPSNANAQMDVEALAKTLADLKAEGKIVACIVATAGTTDAGAIDDLKAIRK
                     LADEHQAWVHVDAAWGGALLLSKDFRHFLDGIELTDSITLDFHKHFFQSISCGAFLLK
                     DEANYRFIDYKADYLNSEYDEEHGVPNLVSKSLQTTRRFDALKLWFTVEALGEELYAS
                     MIDHGVYLSKEVEAYINATDGLEMLVPAQFASVLFRVVPQGYPAEFVDTLNQNVADEL
                     FARGEANIGVTKVGEHQSLKMTTLSPIATLENVRALLAQVLAEADRIKDSIVNGTYVP
                     PID"
     gene            3458..3820
                     /locus_tag="PXB09_000988"
     CDS             3458..3820
                     /locus_tag="PXB09_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDL5233123.1"
                     /translation="MKKVLGLTLMAMALSACNSTASNGSSQANTGVAPANVISVKQVL
                     AAADDSYVTVEGTLLNKVGDETYLFKDATGQIRVEIDDEVWAGQHVGSEGNKVRLYGE
                     IDKGFNKTELDVKTLTVL"
     gene            complement(3910..4497)
                     /locus_tag="PXB09_000989"
     CDS             complement(3910..4497)
                     /locus_tag="PXB09_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5233124.1"
                     /translation="MNHLIIYAHPNPSSFNHAILEKTIAASVPNKVVVRDLYQLNFKP
                     ILDWAEFQGTLSKHYEADVAIEHQYWLEADVITLIYPLWWMGFPAILKGYLDRVLSYD
                     FAYRNGEIESIGLLTGKKMQQFVTLGNSNEKYERKGFLAAFEHTLGKGLFEFCGIRDV
                     KMHYFGNIGLKETDYTAILQQITASCSTILKEQAV"
     gene            4673..5221
                     /gene="napF"
                     /locus_tag="PXB09_000990"
     CDS             4673..5221
                     /gene="napF"
                     /locus_tag="PXB09_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDL5233125.1"
                     /translation="MTDYPNQSLPRRSFLRGQFLDSLKSQKVSQQGYEPIRPPWANLA
                     NFLEKCTACGNCIQACETQIIVKGAAGYPEIDFSRGECTFCEKCVHSCEAEVFRAVSE
                     QPWSHKIEIQAGCLLKLGTECRSCGDSCEMRVIRFRPSLGGIAEMVLNLESCNGCGAC
                     LSVCPTSAIKIQPLQTQANRDE"
     gene            5214..5480
                     /locus_tag="PXB09_000991"
     CDS             5214..5480
                     /locus_tag="PXB09_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDL5233126.1"
                     /translation="MSEKLSEQENWYVCSLVVQAKPEKLEEVKAEILKIPHTEIHGEK
                     TDEGKLVVTIESNVHLALSDRIDQVRDIKGVIVVSLISNYIDEQ"
     gene            5519..8017
                     /gene="napA"
                     /locus_tag="PXB09_000992"
     CDS             5519..8017
                     /gene="napA"
                     /locus_tag="PXB09_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDL5233127.1"
                     /translation="MELNRRDFMKANAAVAAAAAAGIMIPVKNVQADDTGIRWDKAPC
                     RYCGTGCSVLVGTKDGKVVATQGDPDAEVNRGLNCIKGYFLSKMMYGADRMQEPMLRM
                     KDGKFDKNGDFTPVSWDQAFSIMAEKIKTTIKNDGPNAVGMFSSGQTTIFEGYAKVKL
                     WKGGFRSNTIDPNARHCMASAAVAFMRTFGMDEPMGCYNDIEKTDAFVLWGSNMAEMH
                     PILWSRISDRRLSDNKVKVVVMSTYEHRSFELADTPIIFKPHSDLAILNYIANYIIQN
                     DKVNWDFVNKHTKFKRGETNIGYGLRPEHKLQQNTNAKTAGKMYDSDFEEFKKIVAPY
                     TLEEAHRISGVPKDQLETLAKLYADPNQKLVSFWTMGFNQHTRGVWVNHMMYNVHLLT
                     GKIALEGCGPFSLTGQPSACGTAREVGTFIHRLPADMVVTNPKHREIVENSWKLPAGA
                     IPDVPGFHATAQSRALKDGKMKFLWQMCTNNMQGGPNINEEIFPGWRNPETFIVVSDP
                     YPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWRQQVKGPANARSDTWQLVEFSKY
                     FKVEEVWPEELLAKAPELRGKTLYEILYRNGKVDSYQVPTNIPGYMNDEADHFGYYIQ
                     KGLFEEYAEFGRGHGHDLADFDTYHKVRGLRWPVVKDEKTGEYKETLWRYREGYDPYV
                     KAGEEVAFYGNADKKAVILGVPYEPPAEAPDEEYDLWFCTGRVLEHWHTGTMTRRVPE
                     LHKAFPTNLVWMHPNDAKKRGLRHGDKVKVISRRGEYVSNLDTRGRNKCPEGLIYSTF
                     FDAGQLINKVTLDATDPISFETDFKKCAVKVVKA"
     gene            8106..9011
                     /gene="napG"
                     /locus_tag="PXB09_000993"
     CDS             8106..9011
                     /gene="napG"
                     /locus_tag="PXB09_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDL5233128.1"
                     /translation="MKMDPNRRQFLKNATRTAAGVCGVGMILGLQQQQSFARQGVALR
                     PPGALPEQDFLSACTRCGQCVQACPYDMLHLASLISPVEAGTPYFIARDKPCEMCLDI
                     PCMNACPTGALSEELKDIDDARMGLAVLLDHETCLNWQGLRCDVCYRVCPLIDKAITL
                     EKVHNDRTSIHAKLIPTVHSDACTGCGKCEQACVLEEAAIKVLPMDLAKGLLGRHYRL
                     GWQEKQNAGKSLIEDVHPEGLRPAYDARMPEGLHEPVYQHMEVKPDVKVATPSRATQN
                     YVPNSTTVEAPEHFPDLDLNLKGVK"
     gene            9011..9889
                     /gene="napH"
                     /locus_tag="PXB09_000994"
     CDS             9011..9889
                     /gene="napH"
                     /locus_tag="PXB09_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDL5233129.1"
                     /translation="MAANSPKNAGLEARQKLGWWHAYRFLILRRLSQLSIILMFLSGP
                     LWNVWILKGNYSGSLLLDTVPMTDPLMTAEVLATGYRPEWTVLVGALIMVAFYGIVGS
                     KLFCSWVCPMNMVTDTAAWLRRKLGIRQTAKIPRNLRYVILAVILVGSAISGTLLWEW
                     INPVAALGRVFVFGLGATLWLVLVVFLFDLLVAEHGWCGHLCPIGATYALIGAKSLIK
                     VKVVDRNRCDNCMDCYNVCPEPQVLRVPLHGKPEESTVILSKDCITCGRCIDVCAENV
                     FAFGMRFQGSIDVKNI"
     gene            9935..10363
                     /locus_tag="PXB09_000995"
     CDS             9935..10363
                     /locus_tag="PXB09_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDL5233130.1"
                     /translation="MRKYLAFILAVMSGFAMAEAPKLSGSIDETTESVAPGFHNPQKD
                     VGTIPTTFPFQPPLVPHSIRGLQVSKNVNHCLGCHAIEPSKTTGATRLPPSHFTDRDG
                     KVYENESPRRYFCLQCHVQQTDVNPIIQNKFESVRESQAK"
     gene            10374..10982
                     /locus_tag="PXB09_000996"
     CDS             10374..10982
                     /locus_tag="PXB09_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5233131.1"
                     /translation="MLRRFCNWLRSPSKMAIGAVILISALGGIFAWSGFNAGLAMTNT
                     EEFCSDCHMNDVVPEYRASAHYSNRSGVKAICSDCHVPHEFFPKWQRKIIAAKEVYAH
                     FTGKVDTKEKFEAHRGEMAEREWARMKANSSQECRNCHNFDDMDFTQQKNIAQQMHAL
                     AQEQGKTCIDCHKGIAHNLPHMEAIQKNFIPDDLLKKAEEKK"
     gene            complement(11044..11886)
                     /gene="cpdA"
                     /locus_tag="PXB09_000997"
     CDS             complement(11044..11886)
                     /gene="cpdA"
                     /locus_tag="PXB09_000997"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HDL5233132.1"
                     /translation="MDAKRMHEYIKLPVTGVIKLLQITDPHLFSNPEETLLNVKTVKS
                     FSAVIEQINKQAKQYFDLVLATGDLIQDNNIAGYHYFAQITNSLNSPIVWLEGNHDVQ
                     PSMSEILAQYKHILPHKQILLGEQWQLLMLNTQVVGMPYGELSYSQLKWLEEKLAQYP
                     QRFTLVALHHNILPTNSAWLDQHSLKNSNELSEIFAKFKNVKAIVHGHIHQQVDDIWH
                     GIPIYATPSTCIQFKPNCDQFTLDLQPQGWREIELHENGTIETVVKRLNSNDFLPNVN
                     AIGY"
     gene            12176..12310
                     /locus_tag="PXB09_000998"
     CDS             12176..12310
                     /locus_tag="PXB09_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/trimethylamine N-oxide reductase
                     NapE/TorE"
                     /protein_id="HDL5233133.1"
                     /translation="MRSELLKTLLLSGLILPLLMAFAVGAYGFIVWMLQLFVIGLPGA
                     "
     gene            12314..13477
                     /gene="torC"
                     /locus_tag="PXB09_000999"
     CDS             12314..13477
                     /gene="torC"
                     /locus_tag="PXB09_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDL5233134.1"
                     /translation="MLGSIKALFTRPATKIGLGVLVGIGFIAGAISWHQFNKAMDHTS
                     TEEFCVSCHSMQQPLEELKKTAHWSNKSGVTATCSSCHLPHDYTEKYARKVQASREAW
                     AELSGKYKEEGSFEKHRLEMAEREWARFAANGSKECKACHSYERMNFDKMGEAARKAM
                     KPAAEKDQSCMDCHKGIAHHLPKADENALKSKFDQFVNKSPNQGKSYYTKGNAELFLD
                     EGLSQAIGQLETAVPVAFVQAGKNADLVELTMWRKEKGFGRIWYHDFGKNITDAVLTK
                     EFMANQPKFEVLETKEDPITGLNWQKVKLQAWIGKAQLLDDVTPIWANAENQYKTQCS
                     TCHRQPDVAHFDSNSWIGLFNGMVGFTNMDKQTGKEVLRYLQMHASDSEEAKH"
     gene            13577..16042
                     /gene="torA"
                     /locus_tag="PXB09_001000"
     CDS             13577..16042
                     /gene="torA"
                     /locus_tag="PXB09_001000"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5233135.1"
                     /translation="MQQSRRQFLKNMSVMAAAVTMPNFLVPRNVFASEDLSQWKVSGS
                     HWGAMRAKIENGRVAEIKPFEFDKHPTEMLNGIKGLIYSDSRIRYPMVRLDWLKNRHN
                     SNTAQRGDNRFVRVTWDEALDLFYQELERVQKEYGPWALHTANVGWRSTGQFHSCGNH
                     MIRAIAMHGNSVGTAGDYSTGAGQTILPYVLGSTEVYSQGTSWEIILKESENIIFWAS
                     DPVKNLQVGWNCETHEAYAYLEKLKEKVAAKGVNVICVDPVKSKTQNFLGCEQQYINP
                     QTDVPFMLALAHTLYTENLYDKKFLDMYTVGFEKFLPYLLGETEDKVAKTPEWAAEIC
                     GISADKIREFARMLAGKRTQFIFGWAIQRQQHGEQPYWMGAVLASMLGQIGLEGGGIS
                     YAHHYSSIGIPESGAAMPGAFPLNIDEGQTPKYDNKDYKGYSDTIPVARMTDSLLHAG
                     ETIDYNGKKVTYAPFKMAIFTGCNQWHRHSERNKMKQAFQKLETIVSINYSWTATCRF
                     SDIVLPACTPFERNDIDAYGSYSNRGVIAMHKLVDPLYDSRSDFEIFRDLCRRFGKEK
                     EYSRGMDEMQWVEKLYKDCRRENRGKFEMPEFAEFWQKGYVLFPEGKPWVRHADFRED
                     PELHALGTPSGFIEIYSNKIASFGYDDCKGHPMWFEKAERSHGGKNSDKFPYWLQSVH
                     PDKRLHSQLCESKELRETYSVQGREPLYINPQDAAKHGIQDGDLVRVFNDRGQAIVGA
                     VLSDNFPTGVVRLQEGAWYSPLDESVGAIDTYGDPNTMTLDIGTSKLAQAVSANTCLV
                     NIEKFIGNAPAPNGFNGAIEVTA"
     gene            16042..16632
                     /gene="torD"
                     /locus_tag="PXB09_001001"
     CDS             16042..16632
                     /gene="torD"
                     /locus_tag="PXB09_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDL5233136.1"
                     /translation="MTLAISREERQFIYGWFNAMLARELSDEQLNALQAGEFDDFFAY
                     LSELGFAEQVAKFQAEVTACRQLEFPRLELAADFAQLFLLEGNLSAIPYASAYLSGEA
                     LAKNLAEMDRLLGEFGLQVNRETKEPSDHLCVYLTLFDRLLAEKPLETQQQFLQNQLM
                     SWLPAWFAKAKTVKTNTGVYPALLRLFEQVLLKEQR"
     gene            16772..17461
                     /locus_tag="PXB09_001002"
     CDS             16772..17461
                     /locus_tag="PXB09_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDL5233137.1"
                     /translation="MQNNKTTYLNWYDLCVLTLILFGEAIYTSTQQYFITTEMQGNFE
                     ENLTFSNEQNYWALLTQLALLLIAMGYLKWRNFDFSRWVIRPSWLAFFSGIGLFILLS
                     LAMDLYFETLYGVYNLVYPEPFWAVLREVNISTVLYAILNGFYEEIFFLGICLAVKPE
                     YLKWAVIYSLIIRVSFHTYQGMESALGLGIWLGLIIYLLYSRSKQKNLFPFWVAHSIA
                     DILGLSLLAYF"
     gene            17619..18461
                     /locus_tag="PXB09_001003"
     CDS             17619..18461
                     /locus_tag="PXB09_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5233138.1"
                     /translation="MKSIKKLTLATLILVGLTACGSGGSGSSSNNAKSKPQVELKKTE
                     EDKKTEEDKKTEEDKKTEEDKKTEEDKKTEEDKKAEEAKKIAEAKGIGNKEYKDGLNE
                     LEEKNETGKNGEEIRTYGYLYNSHYSVVTAKMKQTLQENGRQMEPTVEVKGLKTENLP
                     TEGKATYKGEAFDSHGNNSNSVVGGELIYNVDFSSRTGSGLVKNVQGGSIELAQGEIK
                     NDSIIASAHQKYNDQAVGNGSYNIQFFGPNAEEIGGKIELNGEGEGSMKQMLGIAGTR
                     EEQK"
     gene            18510..19904
                     /locus_tag="PXB09_001004"
     CDS             18510..19904
                     /locus_tag="PXB09_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5233139.1"
                     /translation="MYKKHFLFLLVSPLVMAETVEFQQDPKEFDGQRQAVKFEQEIAK
                     KDLKLTAYLEEDNSLKGIEQHINQAILRQDWAKLERLLGDYAKQEQFDPLLLDYALAA
                     LAYAKKDYRSAAFYYQQLLKKQPDLTYPRFDLALILKEDYRYREAEQEFKQLKTDDLR
                     NAVNSALAQIEEEESWKPDFYLQYTQTNNVNNASSSPTVNVNGRIFIKESDSLPQSAK
                     GVRYGVGLSKMRNIGGNHFVGVDLGYNGVYYWNNHDYSEQSVSLTPKYSYRTATYRIG
                     VSPFIEQNWLGSSRYNYQFGSSINAVKLFERGLISGSFSHLQKRYSEQHIADRYNGYR
                     NQLTLGTQWQAVKNWRFFANLNASREITREKAQSSNKWLATIGVIYQTPSWASSVSVG
                     YGKRYFADKHYLFGYKRQDKEYQANVAVWNRSWHWQGIVPKLNFRYQKIDSNIADFYS
                     RSNKEVFMTLEKLF"
BASE COUNT         5983 a         3980 c         4670 g         5438 t
ORIGIN      
        1 taaacatcac aaaagtgaac ttttttaatc ttattgattt aatttaatca attttaaggt
       61 ggtaaattgg atagggtatg aaagtgaaag gcatttattg ctagataaaa gcttcccttt
      121 tcaataaaaa agagtatcat acgctctctt aaacgtaacc ctacatttaa gtctgtttcc
      181 aacctatccc aatttcttta ttccttaggg gcatataggg taaaaacaaa aaagctgaaa
      241 cgcttttttt aataagtagc gagtcaaatg ccccatggca tctattcttt taggaataga
      301 aagcttaggc tttccgcaag gcacccgact tatttttttc acctcttgta gaaggtttat
      361 tttcaatgac aattaaaact cctattcaag ccgttcttgc ttcaaaccaa tattttttag
      421 atcgccaaga tgcaatggaa tcaaacgtgc gtagctaccc acgtaaatta ccttttgctt
      481 accaaaaagc acaaggcgtt tgggtaactg atgttgaagg caatgaatac ctcgatttcc
      541 tagcaggtgc aggaacgctt gcattaggtc ataaccaccc taaattaatc caagcagtta
      601 aagatgtatt agacagtggt ttacctttac actcgttaga tattacgact ccgttaaaag
      661 atgcttttac ggaagaatta ctctctttct ttccaaaaga taaatatatc ctccaattta
      721 ctggcccgtc tggtgcagat gctaacgaag cggcaattaa attagccaaa acctacactg
      781 gtcgtggcaa cgtaattgct ttctccggtg gtttccacgg aatgacccat ggtgcgttat
      841 cgctcaccgg taatttaagt gcgaaaaatg cagtacaagg cttaatgccg ggcgtacagt
      901 ttatgcctta tccgcacgaa taccgctgtc cgtttggcat tggtggcgaa gccggtgcaa
      961 aagcagttga acattatttt gagaacttta ttgaagatgt tgaaagtggt gtggtaaaac
     1021 cggcagcggt gatccttgaa gccattcaag gtgaaggcgg tgtggttccg gctccaatca
     1081 gcttcttaca aaaagtgcgt gaagtcactc aaaaacacgg catcttaatg attgtggacg
     1141 aagttcaagc tggtttctgc cgttcaggga aaatgtttgc ctttgaacac gcaggcattg
     1201 agccggatat cgtagtaatg tcaaaagcga ttggtggtag cttaccgctt gcggtattag
     1261 cgatcaaaaa agagtttgac gcttggcaac cggcaggtca taccggtaca ttccgtggta
     1321 accaattagc aatggcaacc ggctatgtat cgcttaaaat tatgcgtgaa gagaatttag
     1381 cgaaaaacgc acaagagcgt ggcgaatact taactaacgc attacgtgaa ttaagcaaag
     1441 aattaccttg tattggcaat gtgcgtggta aaggcttaat gatgggaatt gatattgttg
     1501 atgaacgtca gccaaaagat gcaacaggtg catacccgcg tgattgcgat ttagccgttg
     1561 caattcaaaa atactgcttt aaaaacaaat tgttattaga gcgtggcgga cgtggcggta
     1621 atgtggtgcg tgttctttgt gccgtgaata ttacccaagc agaatgtgaa gagtttatta
     1681 aacgctttaa acaatctgtt gctgaagcag tgaaagcggt gcgtggttaa tagttagaat
     1741 ggtaggagcg aaacattttt cgccctaatg taaaaagggg cgaatattta ttcgccccta
     1801 caccaatagg atagaaataa tgtcaaacct agaaaaacac agacaatccc tgttttgtag
     1861 cgatccaaaa tcgattgcgg attatgaatc ggcaatgaat aacgctgtga aagcggtttc
     1921 agactggctg aaagaagaaa aaatgtacac cggtggctca attaaagagt tgcgtgccaa
     1981 aatcaacggt tttaacccaa cccaagctgg tgtgggcgtg caaaaatcac tggagcattt
     2041 ggtggaaatt ttcttaaagc caagcctcaa agttcaccac cctcattctt tggcccactt
     2101 acattgcccg acaatggtaa ccagccaaat tgcagaagtg ttaattaatg ccaccaacca
     2161 atcaatggac tcttgggatc aaagcccggc aggttcgatt atggaagagc atttaattga
     2221 ctggctacgt caaaaagtcg gctatggcaa aggaacttca ggagtcttta cctcaggtgg
     2281 tacgcaatca aacctgatgg gcgtattatt ggctcgtgac tgggcgatag cgaaccattg
     2341 gaaaaaggca gacggttcag agtggtcggt gcaagccgac ggtattcctg ccgatgcaat
     2401 gcaaaaagtg aaagtggttt gttccgaaaa cgctcacttc tcggtgcaga aaaatatggc
     2461 aatgatggga atgggtttcc aatcggtagt gactgtaccg tcaaatgcca atgcacaaat
     2521 ggacgttgaa gctcttgcga aaacgttggc ggatttaaaa gccgaaggca aaattgtggc
     2581 ttgtatcgtc gcaaccgcag ggacgaccga tgccggtgcg attgatgatt taaaagcgat
     2641 ccgtaaatta gccgatgaac atcaggcttg ggttcacgtt gatgctgctt ggggtggtgc
     2701 attattactg tcgaaagatt tccgccactt cttagacggc attgaattaa ccgattccat
     2761 tacccttgat ttccacaagc atttcttcca atcaatttcg tgtggggcat tcttgctaaa
     2821 agatgaagcg aattaccgct ttattgatta caaggcagac tacctgaatt cagaatatga
     2881 cgaagaacac ggcgtgccga atttagtgtc aaaatcattg caaactaccc gccgttttga
     2941 tgcgttaaaa ttatggttta ccgttgaagc cttgggtgag gagctatacg cttcaatgat
     3001 cgaccacggg gtttatcttt ctaaagaagt ggaagcctac attaatgcca ccgatggctt
     3061 ggaaatgtta gtgccggcac aatttgcctc agtcttattc cgtgtcgtac cacaaggtta
     3121 cccggcagaa tttgtggata ccttaaacca aaatgtggca gatgagttat ttgctcgtgg
     3181 cgaagctaac attggtgtga ccaaagtcgg tgagcatcaa tcactgaaaa tgactacttt
     3241 aagcccgatt gcaacgcttg aaaacgtaag agcattatta gctcaggtgt tggcagaagc
     3301 agatcggatt aaagattcga ttgtaaatgg aacttatgtt ccgccaattg attaaactgc
     3361 gttaaaaata aaaaggtgtt ttcgacattt atttgtgttt taatgtttgc attcggtagt
     3421 ctttatcgaa tgcaaatttt tttaacaagg agtttttatg aaaaaagtcc tgggtttaac
     3481 attgatggca atggcgttat cggcgtgtaa ttcaactgct tccaacggtt cttcacaagc
     3541 aaatacaggt gttgcaccgg cgaatgtgat tagcgtgaaa caggtgttag cggcagcaga
     3601 tgacagctac gtgacggtag aaggcacact cttaaacaaa gtcggtgacg aaacttactt
     3661 atttaaagat gcgacagggc aaatccgtgt tgagattgac gatgaagtat gggcaggtca
     3721 gcacgttggt agcgaaggca ataaagtccg tttatacgga gagattgaca aaggtttcaa
     3781 taaaaccgag ttagatgtta aaacactcac tgttctgtag aagatcaaac cttaatttgg
     3841 ttccccgcct tgtttggcgg ggtttttacg ttaattaatc aaaccatcct tttgcaaaaa
     3901 aacgcaaaat tataccgctt gttccttcaa tattgtgcta caagatgctg tgatttgctg
     3961 caaaatagcg gtgtaatcag tctcttttaa accaatatta ccgaaatagt gcatttttac
     4021 atcacgaatc ccacagaact caaacagccc ttttcccagc gtatgttcaa atgctgctaa
     4081 aaagcctttt cgttcatatt tttcattgga attaccgagc gttacaaatt gttgcatttt
     4141 tttgccggtc agcaagccga tactttcaat ttccccgtta cgataggcaa aatcataact
     4201 taacaccctg tctaaatagc cttttaaaat tgccggaaag cccatccacc aaagcgggta
     4261 aattaacgta atcacatcag cttcaagcca atattgatgc tcaattgcca catctgcttc
     4321 atagtgttta ctgagtgtgc cttgaaattc cgcccagtct aatatcggct tgaagttgag
     4381 ttggtagaga tctcgtacaa ccaccttatt tggaacggaa gctgctatcg ttttttccaa
     4441 aatcgcatgg ttaaagctgg agggattcgg gtgtgcgtaa ataatcaggt gattcatagc
     4501 gttttccttt actgtgtcga ggcagctact agaagatttt agcgaaactt tctttgatga
     4561 aaatcaatat tttggcgaat ataccggcaa ataccccgtt tgaggaatga acggttttaa
     4621 gtgaacatta gataatttag cctattatag tgatgagtaa aaaggtgttt tcttgactga
     4681 ttatcctaat caatcacttc ctcgccgtag ctttttgcga gggcaatttt tagactcgtt
     4741 aaaaagccaa aaagtcagtc agcaagggta tgagccgatt cgtccgcctt gggctaattt
     4801 agcaaatttt ttagaaaaat gcaccgcttg cggtaactgc attcaggctt gcgaaaccca
     4861 gattattgta aaaggtgctg cgggctaccc tgaaattgat tttagccgtg gtgaatgcac
     4921 tttttgtgaa aaatgtgtgc attcttgcga ggcagaggta ttccgagcag tttcagaaca
     4981 gccttggagc cataaaattg agattcaagc cggctgttta ttaaagctcg gaacggaatg
     5041 ccgaagctgt ggcgatagct gtgagatgag agtgattcgt ttccgcccga gtttaggtgg
     5101 cattgccgaa atggtattaa atttggaaag ctgtaatggc tgtggggctt gtttgagcgt
     5161 ttgtccgaca agtgcgataa aaattcagcc attacaaaca caggcaaaca gagatgagtg
     5221 aaaaattatc cgaacaggaa aactggtatg tgtgcagtct cgtggtgcaa gcaaaaccgg
     5281 aaaaattgga agaagtaaaa gccgagattc tgaagattcc tcataccgaa attcacggtg
     5341 agaaaacaga tgaaggcaaa ttggtcgtga cgattgaaag caatgtgcat ttagcccttt
     5401 ccgatcgaat cgatcaagta agagatatta aaggcgtgat tgtggtgtct ttaatttcta
     5461 attacattga tgaacagtga ttaatgatta tttttgaagc caaacgtggg acatagttat
     5521 ggaactcaat cgtagagatt ttatgaaagc gaacgccgct gtggcagctg ctgcagccgc
     5581 aggaattatg attcctgtga aaaacgttca ggcagatgac accggtattc gttgggataa
     5641 agccccttgt cgttactgtg gtacaggttg tagcgtgcta gtcggtacta aagacggtaa
     5701 agtagtggca acccaaggtg acccggatgc agaagtaaac cgtggtttaa actgtattaa
     5761 aggttatttc ttatccaaaa tgatgtacgg tgcagaccgt atgcaagagc caatgttgcg
     5821 tatgaaagac ggtaagttcg acaagaacgg cgatttcacg ccggtttctt gggatcaagc
     5881 ctttagcatt atggcggaga agattaaaac cactattaaa aatgacggcc cgaatgctgt
     5941 aggtatgttc tcatcaggtc aaacaaccat ttttgaaggt tatgcgaaag tgaaactttg
     6001 gaaaggtggt ttccgttcaa atacgattga cccgaatgcc cgccactgta tggcgtccgc
     6061 tgcggttgcc tttatgcgta cctttggtat ggacgagccg atgggctgct ataacgacat
     6121 cgaaaaaacc gatgcgttcg tgctttgggg ttcaaatatg gcagaaatgc acccgatttt
     6181 atggtctcgt atttctgatc gccgtttatc agacaataaa gtgaaagtgg tggtaatgtc
     6241 cacttacgaa caccgttcgt ttgaattagc cgatacaccg attatcttca aaccacactc
     6301 agatttagca attttaaact acattgcgaa ctacattatc caaaacgata aagtaaattg
     6361 ggattttgtt aacaaacaca ccaaatttaa acggggtgaa accaatatcg gttacggttt
     6421 acgtcctgaa cacaaattac aacaaaatac caatgcgaaa actgccggta aaatgtatga
     6481 cagcgatttt gaagagttta agaaaatcgt tgccccttat acattagaag aagctcaccg
     6541 tatttcaggc gtgccgaaag atcagcttga aacattagcg aaattatatg cagatcctaa
     6601 ccaaaaatta gtgtcgttct ggacgatggg ctttaaccaa catacccgtg gtgtgtgggt
     6661 aaaccatatg atgtacaacg tccatttatt aaccggtaag atcgcattag aaggttgtgg
     6721 gccgttctca ctcacgggtc agccgtccgc ttgtggtact gcccgtgaag tgggtacatt
     6781 tattcaccgc ttaccggcag atatggtggt cacaaatccg aaacaccgtg agattgtaga
     6841 gaattcttgg aaattaccgg ctggagcaat tcctgatgta ccgggctttc acgctacagc
     6901 tcaaagccgt gccttaaaag acggcaaaat gaaattctta tggcagatgt gtaccaacaa
     6961 tatgcagggc ggcccgaata tcaatgaaga gatcttcccg ggctggcgta atcctgaaac
     7021 ctttattgtg gtttcagatc cgtacccatc tgtttcagca gtggctgctg acttaattct
     7081 tccaacctgt atgtgggtgg aaaaagaagg ggcttacggt aacgcagaac gccgtaccca
     7141 attctggcgt cagcaagtta aagggccggc aaatgcccgt tcagatactt ggcagttagt
     7201 agagttctct aaatacttca aagtagaaga agtatggccg gaagagttat tagctaaagc
     7261 accggaattg cgtggtaaaa ctctatacga aatcctttac cgcaacggca aagtagatag
     7321 ctaccaagtg ccaactaaca ttccgggcta tatgaatgac gaagcagatc acttcggtta
     7381 ctacattcaa aaaggcttat ttgaagagta tgcggaattt ggccgtggtc acggtcacga
     7441 tttagccgac tttgacacct accacaaagt acgtggctta cgttggccgg tggtaaaaga
     7501 cgagaaaacc ggcgaataca aagaaacttt atggcgttac cgtgaaggct atgacccata
     7561 cgttaaagcc ggtgaagaag tggcattcta tggcaatgcg gacaaaaaag cagtgatttt
     7621 aggtgtgcca tacgaaccac ctgcggaagc accggacgaa gaatatgact tatggttctg
     7681 taccggtcgt gtactagaac attggcacac cggtacgatg acccgccgtg tgccggagtt
     7741 acataaagca ttcccaacca acttggtttg gatgcacccg aatgatgcga aaaaacgagg
     7801 cttacgtcac ggtgataaag tgaaagtgat ttcacgccgt ggtgaatatg tatcgaactt
     7861 agatacccgt ggacgtaata aatgtccgga aggtttgatt tactcgactt tcttcgatgc
     7921 cggtcagtta atcaacaaag tgacacttga tgcgactgat ccaatttcat ttgaaaccga
     7981 cttcaaaaaa tgtgcggtta aagtggtgaa agcttaattg taggggcaaa ttatttgcct
     8041 cagacaagcg gtcaaatttg caaatttttt tacaaaaacg accgcttacc taagaggaac
     8101 ccacaatgaa aatggatcca aatcgtcgcc agtttttaaa aaatgcaacc cgtaccgcag
     8161 ccggtgtttg cggtgtagga atgattttag ggctacagca acaacaaagt tttgcccgtc
     8221 aaggggtagc actacgccca ccgggtgcat tgccggagca agatttcctg agtgcttgca
     8281 cccgttgcgg acaatgtgtg caggcttgtc cttacgatat gttgcatttg gcatcgctta
     8341 tttcaccagt ggaagccggc acgccatact ttattgcacg ggataaacct tgcgaaatgt
     8401 gcttggatat tccctgtatg aatgcttgcc caaccggggc attaagcgaa gagctaaaag
     8461 acattgacga tgcacgaatg gggcttgcgg tgttgctcga ccacgaaact tgtcttaact
     8521 ggcaaggctt gcgttgtgac gtgtgttacc gtgtttgtcc gttaatcgac aaagcgatta
     8581 ctcttgagaa agtgcataac gaccgtacct cgattcacgc caaactgatt ccgaccgtgc
     8641 attctgatgc ttgcaccggt tgcggtaaat gtgaacaggc ttgcgtattg gaagaggcag
     8701 cgatcaaagt gttaccgatg gatttagcca aaggcttgct cggtcgtcac tatcgtttag
     8761 gctggcaaga gaaacaaaat gccggtaaat cgctgattga agatgttcac ccagagggtt
     8821 tacgcccagc ttatgatgcc agaatgccgg aaggcttaca cgagccggtg tatcagcata
     8881 tggaagtaaa acctgatgtg aaagtggcta cgccaagtcg ggcgacacaa aactatgtgc
     8941 cgaactctac gacggtggaa gctccggagc atttccctga tttagacttg aatctcaagg
     9001 gggtgaaata atggcagcca attctccaaa aaatgcgggc ttagaggctc gtcagaaact
     9061 aggttggtgg cacgcttacc gctttttgat tttaagacgc ttaagccaac tcagcattat
     9121 tttgatgttt ttaagcggcc cactttggaa tgtctggatt ttaaaaggaa actacagcgg
     9181 tagcttatta ctagataccg tgccgatgac agacccatta atgaccgctg aagtgctggc
     9241 aaccggctat cgccctgaat ggacggtatt ggttggggcg ttaattatgg tggcgtttta
     9301 cggcattgtc ggcagcaagc tgttttgtag ttgggtctgc ccgatgaata tggtaacaga
     9361 tactgctgct tggttaagac gcaaactcgg tattcgccaa actgctaaaa ttccacgcaa
     9421 tttacgctat gtgattttgg cggtgatttt agtcggtagt gcgatttccg gaacactatt
     9481 gtgggagtgg atcaacccgg ttgcggctct cggtcgggtg tttgtattcg gtttaggggc
     9541 aacgctttgg ctggttttag tggtgttctt gtttgactta ttggtggcag aacatggctg
     9601 gtgtggtcat ctttgcccga ttggtgcaac gtatgcctta attggggcga aaagcctgat
     9661 taaagtcaaa gtggtagatc gtaaccgttg cgataattgt atggattgtt acaacgtttg
     9721 tccggaacct caagtgttgc gtgtgccgct acacggtaaa ccggaggaaa gcacggttat
     9781 cttatctaaa gattgcatta cctgcggacg ttgtattgac gtttgtgccg aaaatgtatt
     9841 tgccttcgga atgcgttttc aaggcagtat tgatgtgaaa aatatttaat ttttatcttt
     9901 ttgaaaacaa gaattttaat ggagtgaacc tcaaatgaga aaatatctcg ccttcatttt
     9961 agccgtgatg tccggctttg caatggcgga agcccctaag ttatccggat caattgatga
    10021 gacaaccgaa agtgttgcac cgggatttca taacccacaa aaagatgtgg gcacgattcc
    10081 aaccactttc cctttccaac caccgcttgt tccacatagt attcgtggct tacaagtgag
    10141 caaaaacgta aaccattgtt taggttgcca cgctattgaa ccatctaaaa ccacaggtgc
    10201 gacccgttta ccgccaagcc attttaccga ccgtgatggc aaggtgtacg aaaacgaatc
    10261 tcctcgtcgt tatttctgtt tgcaatgcca cgtgcaacaa actgatgtaa acccgattat
    10321 tcaaaataaa tttgaatctg tacgtgaatc tcaagctaaa taaggagtaa gtaatgttga
    10381 gaagattttg taactggtta cgtagcccaa gcaaaatggc aattggtgct gtaatcctta
    10441 tttctgcatt aggtggtatt ttcgcttgga gtggttttaa tgcagggtta gcaatgacaa
    10501 atactgaaga gttttgttca gattgccata tgaacgatgt tgtgccggaa taccgtgcct
    10561 ctgctcacta ttcaaaccgc agcggtgtga aagcgatttg ttcagattgc cacgtaccgc
    10621 acgaattctt tccaaaatgg caacgtaaaa tcatagccgc aaaagaagtt tatgcacact
    10681 ttaccggtaa agtagatacc aaagagaaat ttgaagctca tcgtggcgaa atggcagaac
    10741 gtgaatgggc acgtatgaaa gcgaacagct ctcaagagtg ccgtaactgt cataattttg
    10801 atgatatgga cttcactcaa caaaaaaaca ttgcgcagca aatgcacgca ttggcacaag
    10861 agcaaggtaa aacctgtatt gactgccaca aagggattgc acacaatctc ccacatatgg
    10921 aagcgatcca gaaaaacttt atccctgatg atttgctgaa aaaagcagaa gagaagaaat
    10981 aacttaacgt gtttcaatag aaaaccctca atttccattg agggtttctt tttagtagcc
    11041 aagttagtaa ccaatggcat tgacatttgg taaaaaatcg ttggaattta accgcttgac
    11101 gaccgtttct atcgtgccgt tttcgtgcaa ttcaatttca cgccagcctt gtggttgtaa
    11161 gtctaaggta aactggtcgc aattcggctt aaattgaatg caagtagatg gggtggcata
    11221 aatcggaata ccatgccaaa tatcatcaac ctgctgatga atatgaccat gcacaatcgc
    11281 ttttacattc ttaaattttg cgaaaatctc ggataattca ttgctgtttt ttaagctatg
    11341 ctgatccagc cacgctgagt ttgtcggcaa aatattgtgg tgcagagcaa ccaaggtaaa
    11401 ccgttgcgga tattgtgcca atttttcttc taaccattta agctgtgagt aagagagttc
    11461 gccataaggc atacctacca cctgggtatt tagcatcaga agctgccatt gctcaccgag
    11521 taaaatttgt ttatggggaa ggatatgttt atattgcgcc aaaatttctg acatactcgg
    11581 ctgaacatcg tgattcccct ctagccacac tatcggcgag tttagcgaat tagttatctg
    11641 tgcaaaatag tgataaccag caatattgtt atcttgaatc aaatcacctg tggcaagaac
    11701 tagatcaaaa tattgcttcg cttgtttgtt tatttgctca ataactgccg aaaaactttt
    11761 tactgttttg acattaagta gagtttcctc cggattggag aaaaggtgag ggtcagttat
    11821 ttgtaataac ttaattaccc ctgttacggg taacttaata tattcgtgca ttcgttttgc
    11881 atccattcaa attctagtaa tttttaactg gtgagattct atcagtaagc taaaagtaaa
    11941 aatgtggact atgccgcatt tttgaaaaaa agtgagatta atcaaaaaaa atttattatt
    12001 ttcgatagct aagacaatgg taagtttgat taatactttc atattgtaat agatgatttt
    12061 tatactgttt ggctgtttct agaacaactt ctttatattt ttgattgata tcaaggcaaa
    12121 ttgtttctga agataaaata attaacactt attagttaat aaaaaaggag ttgaaatgcg
    12181 ttcagaacta ttaaaaacgc ttttgctatc agggctgatt ttaccgctat tgatggcgtt
    12241 tgccgtagga gcttacggct ttattgtgtg gatgttacaa ctgtttgtta ttggtttacc
    12301 gggagcgtag aaaatgttag gttcaatcaa agcattattt actcggcctg caaccaaaat
    12361 cgggttggga gtgttagttg gtatcggttt tattgccgga gcaattagct ggcatcaatt
    12421 taataaagcg atggatcata ccagcactga agagttttgc gtgagttgcc actcaatgca
    12481 gcagccgtta gaggagctta aaaaaaccgc ccactggtcg aataaaagcg gggtaacggc
    12541 aacctgttca agctgccact taccgcacga ttataccgaa aaatatgccc gcaaagtgca
    12601 ggcaagccgt gaggcgtggg cagaattatc cggcaaatat aaagaagaag gctcatttga
    12661 aaaacaccgc ttagaaatgg cagagcgtga gtgggcaaga tttgccgcca atggttcaaa
    12721 agagtgtaag gcttgccaca gctatgagcg aatgaatttt gataaaatgg gcgaagcagc
    12781 tcgtaaggca atgaaaccgg ctgcggagaa agatcaaagt tgtatggatt gccacaaagg
    12841 cattgctcac cacttaccga aagccgatga aaatgcactg aaatcgaagt ttgatcagtt
    12901 tgtgaataaa tccccaaacc aaggcaaatc ttactacacc aaagggaatg ccgaattatt
    12961 tctagacgaa ggtttaagcc aagctatcgg gcaattagaa accgccgtgc cggtggcatt
    13021 tgtgcaagcg ggcaaaaatg cggatttggt tgagctgaca atgtggcgta aagagaaagg
    13081 tttcggtcgc atttggtatc acgatttcgg gaaaaacatt accgatgcgg ttctaaccaa
    13141 agagtttatg gcaaatcagc cgaaatttga ggtgttggaa accaaagaag atccgattac
    13201 cggcttgaat tggcaaaaag tgaaactaca agcgtggatt ggcaaagctc aattattaga
    13261 cgatgttacc ccaatctggg cgaatgcaga aaaccaatac aaaacccaat gtagcacttg
    13321 ccacagacag cctgatgtcg cccacttcga ttccaacagc tggatcggct tattcaacgg
    13381 aatggtcggc tttaccaata tggataaaca gaccggcaaa gaggtgctac gttatttaca
    13441 aatgcacgcc tccgatagtg aagaagcgaa gcattaataa tattactccc ctctttacta
    13501 aagaggggaa ttaatcgagc gttgaataac attctctgta ctagctcacg tttttacaaa
    13561 taaagaagga caagatatgc aacaatctcg ccgtcaattt ttaaaaaata tgtctgtgat
    13621 ggctgccgct gtcacaatgc cgaatttcct cgtgcctcgc aatgtgtttg cgagtgaaga
    13681 cctcagtcaa tggaaagttt ccggctctca ctggggggca atgcgtgcca aaattgagaa
    13741 cggacgagtg gcagaaatca aaccgttcga gtttgataaa cacccgaccg aaatgctcaa
    13801 cggcattaaa ggcttaattt acagcgattc ccgtatccgc tacccgatgg tgcgtttaga
    13861 ttggctcaaa aaccgccata acagcaacac cgcacagcgt ggcgataacc gctttgtgcg
    13921 ggtaacgtgg gacgaagccc tcgacctgtt ctaccaagag ttagaacggg tacaaaaaga
    13981 gtacggcccg tgggcgttac acaccgccaa tgtgggctgg cgttcaaccg gtcaattcca
    14041 cagttgcggt aaccatatga tccgagcgat tgcgatgcac ggtaacagtg tcggcacggc
    14101 aggcgactat tctaccggtg cagggcagac cattctgccg tatgtgctgg gttcaaccga
    14161 agtctattcg cagggcacgt cttgggaaat catcttaaaa gagagcgaaa acatcatttt
    14221 ctgggcaagc gacccggtga agaacctgca agtgggttgg aactgcgaaa cccacgaagc
    14281 ctatgcctac ttggaaaaac tgaaagagaa agtggcagca aaaggcgtga atgtgatctg
    14341 tgttgatccg gtgaaaagca aaacccagaa tttcttaggt tgcgaacagc agtacatcaa
    14401 tccacaaacc gatgtgccgt ttatgttggc acttgcccac acgctctaca ccgagaacct
    14461 gtacgacaaa aaattcttgg atatgtacac ggtcggcttt gaaaaattcc tgccgtatct
    14521 gttaggcgaa accgaagaca aagtggcgaa aaccccggaa tgggcggctg aaatttgtgg
    14581 tatttccgcc gacaaaatcc gtgaatttgc ccgaatgctt gccggcaaac gcacccaatt
    14641 tattttcggc tgggcaattc aacgccaaca acacggcgaa caaccgtact ggatgggagc
    14701 ggtgctagcc tcaatgttag ggcaaatcgg cttggaaggc ggcggcatca gctatgctca
    14761 ccattacagc tctatcggta ttcctgaatc cggtgcggca atgccggggg cgttcccgct
    14821 caatattgat gaggggcaaa ccccgaaata cgacaacaaa gattacaaag gctacagcga
    14881 caccattccg gtggctcgta tgaccgacag cttgctccac gccggcgaaa ccattgatta
    14941 caacggcaaa aaagtgactt acgctccgtt caaaatggcg attttcaccg gctgtaacca
    15001 atggcaccgc cattccgagc ggaacaaaat gaaacaggcg ttccaaaaac tggaaaccat
    15061 tgtttcgatc aactacagtt ggacggcaac ctgccgcttc tccgacatcg tgctgccggc
    15121 ctgtacccca tttgaacgca acgatattga cgcctacggc tcatacagca accgtggcgt
    15181 gattgcaatg cacaagctgg ttgatccact ctacgactct cgctccgact ttgagatttt
    15241 ccgagatctc tgccgccgtt tcggtaaaga gaaagagtac agccgtggaa tggacgaaat
    15301 gcagtgggta gaaaaactct acaaagattg tcgccgtgaa aacagaggta aatttgaaat
    15361 gccggagttt gctgaatttt ggcaaaaagg ctatgtgctg ttcccagagg gcaaaccttg
    15421 ggttcgccac gccgatttcc gtgaagatcc ggaattgcac gcacttggca caccgtccgg
    15481 ctttatcgaa atttacagca acaaaatcgc ctctttcggc tatgacgatt gcaaaggtca
    15541 cccaatgtgg tttgagaaag ccgaacgttc acacggcggt aaaaattccg acaaattccc
    15601 gtactggttg caatcagttc acccggacaa acgcttacac tctcaacttt gtgaatcgaa
    15661 agaactgcgt gaaacttaca gcgtgcaagg gcgtgaaccg ctttacatta acccacaaga
    15721 tgccgccaaa cacggcattc aagacggaga tttagtgcga gtgtttaacg accgtgggca
    15781 agcgattgtg ggggcggtgc tttccgacaa cttcccgacc ggcgtagtgc gtttacaaga
    15841 aggggcttgg tattcacccc ttgacgaaag cgtgggggcg attgacacct atggcgaccc
    15901 gaacacaatg accctcgaca tcggcacgtc caagttggca caagcggttt ccgccaacac
    15961 ttgcttggtg aacatcgaga aatttatcgg caatgccccg gctccgaatg gctttaacgg
    16021 tgcgattgag gtaacggctt aatgacgttg gcaatcagtc gtgaagaacg gcaatttatc
    16081 tatggctggt ttaacgcaat gctcgcccga gaactttcgg acgagcagtt aaatgcctta
    16141 caagcgggcg aatttgacga tttttttgca tacctcagcg aattgggttt tgccgaacag
    16201 gttgcaaaat ttcaagcaga agtgaccgct tgtaggcagc tggaatttcc tcgtctagaa
    16261 ctggcggctg actttgccca actgttttta ttggaaggca atctcagtgc cattccttac
    16321 gcctccgcct atttaagcgg cgaagcgtta gcgaaaaatt tggcggaaat ggacagactg
    16381 ctgggcgaat ttgggctgca agttaatcga gaaaccaaag agccgagcga tcacctttgc
    16441 gtttatctca ccctttttga ccgcttgctt gctgaaaaac cgttggaaac gcaacagcaa
    16501 tttctgcaaa accaactgat gagctggctc cctgcgtggt tcgccaaagc caaaaccgtc
    16561 aaaactaaca ccggcgttta tccggcgttg ctaaggttgt ttgaacaggt gttgctgaag
    16621 gaacaaagat aaagttattt atttgagaat gatttgtatt gagcgaattg agaaaggaag
    16681 ttaaaatttc aacttccttt tttattggct ggatttatcc acattattac aagcggttat
    16741 ttttataaaa aaatttacaa aggagacatt aatgcaaaat aataaaacca cctacctaaa
    16801 ttggtacgat ttatgcgtgc taaccctgat cctgtttggt gaggcaattt atacctcaac
    16861 ccagcaatat ttcatcacca ccgaaatgca aggtaatttt gaagaaaatt taaccttttc
    16921 aaatgaacaa aattattggg cattactgac gcaacttgca ttgttgctga ttgcaatggg
    16981 ctatctaaaa tggcggaatt ttgatttcag ccgttgggtg attcgtccct cttggctggc
    17041 tttttttagc ggtatcgggt tgtttatctt gctctcgtta gcgatggatc tctattttga
    17101 aacattatat ggtgtttaca acctagtgta tccggagcca ttttgggcag tattgagaga
    17161 agtgaatatt tctaccgtgc tgtatgcgat tttaaacggc ttttatgaag aaatcttttt
    17221 cctcggtatt tgcttggcgg ttaaacctga atatttaaaa tgggcggtga tttattcact
    17281 gattattcgg gtgagttttc atacctatca aggaatggaa agtgcgttag gattaggaat
    17341 ttggctcggt ttaattattt atttgctcta ctcacgctca aagcagaaaa acctatttcc
    17401 attttgggtg gcacacagta ttgcggatat tttggggctg agtttgttgg cttattttta
    17461 gttaaaggtg ctacatttaa gcggcataag ttgatagagc tgatcgtacc agtagcataa
    17521 aaacattatt atttgtatgg aaaggtgctt ttaggttaca atataaccga tagttattgg
    17581 ttataactaa aaattatttt taatttaacg gagcaaatat gaagagtatc aaaaaattaa
    17641 ccctagccac tttgatttta gtgggtttaa ctgcttgtgg tagcggtggt tcaggtagca
    17701 gttctaataa tgctaaatcg aaaccacaag ttgagttaaa aaaaactgaa gaggataaaa
    17761 aaactgaaga ggataaaaaa actgaagagg ataaaaaaac tgaagaggat aaaaaaactg
    17821 aagaggataa aaaaactgaa gaggataaaa aggctgaaga agcaaaaaaa attgcagagg
    17881 caaaaggaat tggcaataaa gaatataaag atggattaaa tgagttagaa gaaaaaaatg
    17941 aaacaggtaa aaacggagaa gagattcgaa cctatggtta tctctataac agccattatt
    18001 ccgttgtaac tgccaaaatg aaacaaactt tacaggaaaa tggtcgtcaa atggaaccta
    18061 cggttgaagt gaaagggctt aaaactgaga atttaccgac agagggcaaa gcaacatata
    18121 aaggagaagc ctttgattct cacggtaata acagcaattc agtagtaggt ggagaattaa
    18181 tctataatgt tgatttctct agtcgtaccg gatcaggtct agttaaaaat gtacagggcg
    18241 gttctatcga gttagcacaa ggcgaaataa aaaatgatag tattatagct tctgctcacc
    18301 aaaagtataa tgatcaggct gttggaaatg gtagttacaa tatccaattc tttggtccaa
    18361 atgcagaaga aattggaggg aaaattgagc ttaatggtga gggcgaaggc tcaatgaagc
    18421 agatgttagg tattgcagga acccgagaag aacaaaaata acatttaata cccaatgccg
    18481 tttaatctta aacggcattc ttttttacta tgtataaaaa acattttcta tttttacttg
    18541 tttcgccttt agtaatggcg gaaacggttg agtttcagca agatcccaaa gagtttgatg
    18601 ggcagcgaca agcggttaaa tttgagcaag aaattgcaaa aaaggattta aaattaaccg
    18661 cttacttgga ggaagataat tctcttaaag gtattgaaca gcacattaac caagcgattc
    18721 ttagacaaga ttgggcgaag ctggaaaggc tgcttggcga ttatgcaaag caagagcaat
    18781 ttgatccgct acttttagac tatgctttgg cggcattggc ttatgctaaa aaagattatc
    18841 gctctgcggc gttttattat cagcagttgc tgaaaaaaca gcctgattta acctaccctc
    18901 gttttgattt ggctctgatt ttaaaagagg attatcgcta cagggaagca gagcaagaat
    18961 ttaagcaact caaaaccgat gatttacgca atgcggtgaa cagtgcgttg gctcaaatag
    19021 aggaggaaga gagctggaag ccggattttt atttgcaata tactcaaacc aacaatgtga
    19081 ataatgcttc ttcgtcgcca acggtaaatg taaacgggcg gatttttatt aaagaatcag
    19141 acagcttgcc gcagtcggca aaaggcgtaa gatatggcgt tggcttgagt aaaatgcgaa
    19201 atatcggcgg taatcatttt gtgggagtcg atcttggcta taacggcgtt tattactgga
    19261 ataaccacga ttatagcgaa cagtcggtct cactaacacc aaaatatagc tacagaacgg
    19321 caacttatcg tatcggggtt tcgcccttta ttgagcagaa ttggctgggt agctcacggt
    19381 ataactatca atttggtagc agtatcaatg ctgttaaact ttttgaacga gggctgattt
    19441 ccggctcatt cagccatctg caaaaacgtt atagtgaaca gcatattgcc gaccgttaca
    19501 atggttatcg caaccaactc acgctaggta cgcaatggca agcggtcaaa aattggcgat
    19561 tttttgcaaa tcttaacgct agccgtgaaa ttacccgtga gaaagctcaa tcttccaata
    19621 agtggctggc gaccattggc gtaatttacc aaaccccaag ctgggcaagt tcggtaagtg
    19681 tcggatatgg caagcgttat tttgctgata aacattatct gtttggctat aaacgccaag
    19741 ataaggaata tcaagcgaat gtggcggtgt ggaatcgaag ttggcactgg caagggattg
    19801 tgccgaaatt gaatttccgt tatcaaaaaa tcgatagcaa tattgccgat ttctactctc
    19861 gtagcaataa agaagtcttt atgaccttag agaaactatt ttaaggctgt gtatgaatgt
    19921 cggggagaaa aattttctcc ccgatattta tgtgtagaag atcagacttg atctgacaat
    19981 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtcaaaaatc aatctaaaca
    20041 aaaaggaaac tctcatgttt tattctaaca a
//
LOCUS       DANLTI010000036        19924 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.036, whole genome shotgun sequence.
ACCESSION   DANLTI010000036 DANLTI010000000
VERSION     DANLTI010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19924
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.036"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..527
                     /locus_tag="PXB09_001005"
     CDS             <1..527
                     /locus_tag="PXB09_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2572 family protein"
                     /protein_id="HDL5233140.1"
                     /translation="ALYPQDKTQICQKFQKEQISQADLSDKQFRFLQYQFACQFHSLF
                     KDKKPTKEKYIHFTHLADYLDLSNVPNQEIYTIHSLAELPSSSEREPKIVLAKNAINE
                     NLPQEFYGIVITDYLFDITGKKMYGTLYSSYDNAREERNLTFKKEVLAELEARYSAWR
                     YLPYSEHLMGAVDD"
     gene            520..813
                     /locus_tag="PXB09_001006"
     CDS             520..813
                     /locus_tag="PXB09_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5374 domain-containing protein"
                     /protein_id="HDL5233141.1"
                     /translation="MIKYKAETALSLLVAITLFAIVVLSFSQWQSAQNHRLNQHFQQQ
                     QAVMILENQLALKLAGLDCESSITQNQIRYQIQCSGNRLTIRFPLGKIELNND"
     gene            862..4152
                     /gene="recC"
                     /locus_tag="PXB09_001007"
     CDS             862..4152
                     /gene="recC"
                     /locus_tag="PXB09_001007"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDL5233142.1"
                     /translation="MFTLYQSNQISSLAEMLVKIQQVNPLEDPFEPETILIQSQGMAQ
                     WLQMQIAELNGVMGNCDFLYPTTFLWQQYRLLFPELPKENIFERSSLVWRIMRLLPSC
                     LTLSEFAPLKRYLGDQPNKEQYQLKLYQLSAKIAELFDQYLVYRPHWLVSWEEGNLQA
                     IENEIKIATAAKPIDFDLIRADMKWQSHLWQQIVSDLQSESDEQVFTTSHRAYLQQNY
                     FAKLDDLTETEKAKLPKRIFIFGISSFSPLQLAVFKKLSEHCDIHLFFFNPSEKYWGD
                     SVEEKVWQKLALSHKISQDDLDNLLAEQRNKLLNLWGKQGRDFLAQLIEFEPNTMDVF
                     VEPEENSNLNKLKKQIFSLENDATITDLTADNSLQIHSCHSPMREVEVLHNQLLNLFE
                     QDSTLLPKDIIVMSPDINKYAPYIDAVFSRYNTGNRDPRYIPFSLSDQAFTQVDPIIH
                     SFLQLLAMKESPFNAEELFDLLEVNAIQTRFGFSTEDIHTLRVWVRNAGVRSGVEIEQ
                     PHWQNYNSWENGLNRLLLGSSLKEEQGIWENTLAFGDSYGLNAELVGRLASFIEALLA
                     WVNFLQTPQPLAAWQQAIKNLTADLYQENAENAASILLLNNVNDQIIEQISATHFSDD
                     LQIEVLALLFEQQLSQHSQQLNFLVGRVNFATLLPMRAIPFKVICLLGMNEADFPRQQ
                     QINSFDLMQYAPKKGDRAKRDDDRYLFLEALLSAQQMFYISYIGQSQKDGKEMLPSIL
                     VSQLLDAMNEALTPECKQQLSDEVEVLVRKQPLSVFSKKNFTHPRDHAYNAEWIIKPT
                     VAVQDFLSEPLTNESVASLELDELISFVQNPIRFFFLKVLGISFNTYDDTIDESEIFE
                     MSGLDNYRILNELLTINLAQQQRFFAEEQLKGNLPASYFAQIATQDLIGKITEMQAAL
                     SHYLASESRILSVNREVELERQTLTLNGNIANLYQNEVVLWRVGHLRDKDKIQTWIYH
                     LLLCAYFPEKTVKFYYREGEQVGVLSFETVSQIEALSQLSIYLNAYLDGLSQAQLVIY
                     DRIEEYLKGDGTNSEQVLIDLAEKDERDGSYLHRLLAQTKELDSQAIHQRTQSWFSLM
                     NQKIAKGD"
     gene            4288..7233
                     /gene="ptrA"
                     /locus_tag="PXB09_001008"
     CDS             4288..7233
                     /gene="ptrA"
                     /locus_tag="PXB09_001008"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDL5233143.1"
                     /translation="MKLSFLTQFVAAAFALNVMTYPAFAEVAKNSEKTTASQPQSQLG
                     FELIKQSINKSPNDKAIYQGIKLDNGMEVLLISDSQANKSLMSAIIPIGSMDDPISQQ
                     GLAHYLEHMILMGSKNYPETNSLDGFLTKNGGMNNASTASHRTAYYLQVNNEAFSEAV
                     TRLADTLAFPLLLETNAKKEVNAVNAEMVRAKSHDGHLLHSVNLATANPAHPATKFAV
                     GNKETLSDKPDSKLQTELEQFYKQHYSANLFKVVLYSNQSIEQMAKLAANTLGKMENK
                     HFSIPQTAEPRYRDEDKSVFIQYKPVKSNKMLVIGFDFPNDEMQFKHKTGKYIAYMLN
                     NNTDGTLSDYLIKQGLSDGGIEAVSSANIGRDRGSFDIYIELTDKGLSEQDQIISLVF
                     QQIEKIKQEGIQESYFSEVKESLKQDFQHLQVEKNMDFVEFIADQMLHFPLEHVIDQP
                     YLTETMDNEAIKAKLAAMNIDNARIMLVSDTAKTDKKTPYFEAGYSVAKITQEQKQKW
                     LDFSKNPQLNLPELNPYFTTDFTLNKVETGLTKPKLINDQAGNLIYTMPSVYFTNEPK
                     AKIGVGFNIRPRKDDLKSLTAASILGYMNNLAQTKLDFQSSVAGMNLSLAPAANGLAL
                     SAEGYTQNLAKLMLDSVKQFSRFEFNEDVLAQAKQRLHQELDRNEKENSLNQANAALS
                     RFASYPYFDVPKQREMIDSITLADIEQLRQRILQQSSGFKLLSVGNLSAEQVSALAED
                     LQAVIKNQKSANATGQYVDVSTSQRKINVIKSVPNEDNALLMAFMPNGYNELESLTRA
                     KLLRSIISRWYFDDLRTDKQLGYVVYATDNIIGKTAGIQFMVQSPNTTPAGILEHNER
                     FFTQSFERLKNLSDEEFGKYRDSLVEKLQYKPESLAEEFSEFGSDFSRNNPKFDRLQQ
                     VIELTKALTKADIVAFYQKAVIEKQGFVFVSQAVGTKTKAEDVAKFDGFEQIESIEKL
                     QREFEIKDY"
     gene            complement(7282..8928)
                     /locus_tag="PXB09_001009"
     CDS             complement(7282..8928)
                     /locus_tag="PXB09_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233144.1"
                     /translation="MKFPTLTKISASVLAVLALAACDDKSNENKPTAAAAKPQTEKTF
                     VNCVSRSPTGFSPILMMDGLSYNASSQQIYNRLVEFVPGTTDIEPALAESWEISEDGL
                     TYTFKLRKGVKFHSNKDFTPSRELNADDVVFSFNRQLDKNHPYHTVSNGTYPYFNAMK
                     FPTLLKSVEKVDDSTVRITLTKRDASFLSSLGMDFTSIYSAEYADKMMKAGIPEAVDT
                     TPIGTGPFVFSGYVLDQASRYVANKEYWKGKPDIDRLIFEIVPDATTRYAKLQSGQCD
                     LMDFPNATDIEKMKNDPKINLLSQPGLNIAYVAFNTEKAPFDNVKVRQALNLAVDKKA
                     IIDVVYQGNGFAAKNPLPPTIWGYNDSLADSEYNVEKAKQLLAEAGFPNGFETELWVQ
                     PVVRASNPNPRRMSEIIQADWEKIGVKAKLVTYEWGDYIKRTKAGELTAGTYGWSGDN
                     GDPDNFLSPLFGTPNIGNSNYARFTNPELDALLEKALGSSDKAERTKLYEQAQVILRE
                     QAPWINVAHSINFAPTSKRVEGYKQSPFGYTYLYPVKIVD"
     gene            9004..11094
                     /locus_tag="PXB09_001010"
     CDS             9004..11094
                     /locus_tag="PXB09_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5233145.1"
                     /translation="MIFANQSIELDTVNVIATRDPSKFADTPQKQTKDALLVKQATSV
                     AAALKALPNVDVQGGARAIVQKPSIRGLSDNRIVQVIDGVRQNFDLAHRGSYFVPMSL
                     IQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGAKIRQGYQTANNLSET
                     EASVFAANDRFDALLSGFYNNADNLRSGEGKELNNTGYKQAGGLVKFGWQINDTHRLE
                     LSHRHSQFKQTAPGNNEVENQFTDNDVSAQISAWHAANPGNPSNPVYLAKMLAFYGQL
                     HSSLGSVSYLSDQKITDKSTSLNYYFNPSNPYLSTQVTLYSNSTTENEHRKISGVEDQ
                     TKLSTRGVNIRNHSELSWFSLVYGVDYMLDKVATQRGRNNTDAQYRANPYDAKSKTTG
                     AYLIAHIPLFDEKVVFSPSVRYDRFDTSSETVKYKDSHWSPAAKLTWKATNWLDLTAK
                     YNEAFRAPSMQERFVSGSHFGTTVRGLPINNIFLTNPNLRPETAKNKEVTFNVHFDNV
                     ISQGDKFNFEATYFRNDVKDLINLQVFKANPTSPMEFIPTRSQYQNIANARLSGIELQ
                     TRYQTERLAVFANYGSTKGKDKDSGEALSNIAASKIGFGVNYAVVQDKFTVGANVTRY
                     QAQHRVPKNHGVTYQGYTLTDLHATYAPLKGEWKNLRLDVAVENLFDKKYQPAFSLME
                     GSGRNVKLSAAYSF"
     gene            11165..12853
                     /locus_tag="PXB09_001011"
     CDS             11165..12853
                     /locus_tag="PXB09_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL5233146.1"
                     /translation="MKFYPSLIASAVSFAVVLSGQAAVNVPDAGSLQRELDQRQAQQK
                     VKPSGEWFNQAAKAPYTATDGQELTFPLTQVQVFDRTNQEISTPELAPILANYVGKAV
                     SLTDLSNLANEITEFYRSHNYLVAKAILPPQEIEQGKVKILLFKGNVGEVRLQNQSAL
                     SDKFVARLANTTVNGSEFILKDELEKFALTMNDVPGVNTGLELSAGKQAGEANLLIKL
                     QNAERFSGYVSADNQGNKNTGRYRLATGIKANNLIGWGDELKVDLMSSNNANLKNARL
                     DYSSLIDGYATRLGLTANYLDYELGGNFKALQSQGHTHNLGAYVLHPTIRLPDFRLNT
                     KVSFNHQRLTDKQQAVNVAQKRQVNSLTVGINGSWNSLKDGTSYFSLSALFGNLANHT
                     NEQAHYVATDFQPKSRFTVYQYSLSHEQALPKSFAFNLGVNGQFADKTLDSSQKMLLG
                     GLYGVRGHQAGVASVDEGHLVQTELKHYLPLFSKSLLTSSVFYDYGWGKYYKHSGFLA
                     RGVNNSVKLQSIGAGLSLSEAGSYAINASVAKPLGKKIENADKHQFWFSAIKTF"
     gene            12865..15681
                     /locus_tag="PXB09_001012"
     CDS             12865..15681
                     /locus_tag="PXB09_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDL5233147.1"
                     /translation="MFKRNAISLCILTACSGLAYANTADLPQGERVRVGTATIERTTD
                     KMTVNQSSNKVQIDWNSFDIGKNKEVEFKQPTEMAVAYNRVTGGNASQIQGKLTANGK
                     VYLANPNGVLITKDAEVNVGGLLVTTKDLEKISENGTKDKFSRKLAKEGKILNQGKIT
                     AKGERAFVVLVGDDVANEGEINAKNYYHKETKKVTECYDDSWSLVKQCYDFDKEIVKS
                     TSGEVHLSSGENVTFTLSDRYIDVALDDNTVNSIIKNDGAIIANGDITLTAKGRNQAL
                     DSLIINNGVLQANKVQNKNGTIILSAGETQLHEKSQIKGEKVSFAEASYYGPTEDIKV
                     VSKTGSKVTAPVIDFKGKTVNIQGEFGREDSTDLYNDELQILKTTVNIEVPNTEDIRI
                     ADTDNGGSGSFIQAGALASLLANNGRVNVQGKGFDVSGKLNVNAFKQTDSVLKFINQA
                     GINIHNADIHANGRLFFVTNLPNDTDFQSNIRITDSKINLGNGSMGFGRSSKRWEMHD
                     VVRRADTELRKKFNLDMKNVELNQVDDFVVAGGFQQVNLDNVKARGKTNFYLDSGNSR
                     MFVGEQIYEYGVTDIEKRTQLANLDQRRKRWNSDNYDETDLNWEYNQRFDGFAAKHNH
                     RAPIADTEINIANSDISLDNGFVHLMAEKINLDDSKINITFNQDNSLDESTQINRLGL
                     NGKVSMKNSHINVVGDEKDGISPARHYATMFLVGELLGEKSSIFLKSHQGAVLRTDSN
                     VTIAGKNSKDDLKITAITTGKKMGNEIIGPDGLPTSEDNDANASNTAFAIGYEPNATA
                     IVENASITALAPNGGLAYTGTSKTQIDAKDNATFTFFEKPRAGYDKLLGDIKGNPDKL
                     TPRDFARLYDNIKGIKASSLSEQQLGLADTAKKTSEHTLANSLDVENLVSVTVCDEQN
                     KCEERMLGNKNTNAKVIVGDIKFE"
     gene            15804..15935
                     /locus_tag="PXB09_001013"
                     /pseudo
     CDS             15804..15935
                     /locus_tag="PXB09_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(15990..16751)
                     /locus_tag="PXB09_001014"
     CDS             complement(15990..16751)
                     /locus_tag="PXB09_001014"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDL5233148.1"
                     /translation="MKLNQAQIQNALICGQAVVFDEIDSTNEYLLTHHQRLENGTVCL
                     AEKQTAGRGRRGRTWYSPESENLYFSILWHYPMEQAADLPPLSLVVALIIAESLTVQN
                     VKDIQIKWPNDIYYQGKKMGGILLETQANRNGLDVVIGIGLNLGMAKVDENIVTQAWA
                     DLSQYHFNRNELVCRLAYELQKNLKIYPLVGFAHYAERWQSFDLFRHKAVKLITEAEE
                     IHGISQGINEQGELILKQGDNLRYFGIGEISLRAD"
     gene            complement(16763..17794)
                     /gene="murB"
                     /locus_tag="PXB09_001015"
     CDS             complement(16763..17794)
                     /gene="murB"
                     /locus_tag="PXB09_001015"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDL5233149.1"
                     /translation="MMKHSLTPFHTFHLPAKATQIIEFTTVEQLLSEWQKAFNAQLPI
                     LILGQGSNVLFLEDFDGVVLVNKLKGITHHEDEHFHYLHVQGGENWHELVKWTLAHNI
                     AGIENLALIPGVASSAPIQNIGAYGVEFEQVCDFVEVLNLRSGELFKLSKSECEFGYR
                     ESVFKHQYRDEFAIISVGLKLAKAWKPVLSYGSLAQLNPETVTPIQIFDEVCAVRSSK
                     LPNPDEFGNAGSFFKNPVISNEQFAPIQAKFPAIPHYPQADGTVKLAAGWLIDQTGLK
                     DLQIGGAAVHTQQALVLINKENATGQDVLALAKTVRQRVKEKFGVEIQPEVRFIGKNG
                     EVDSEKITR"
     gene            complement(17898..18572)
                     /gene="crp"
                     /locus_tag="PXB09_001016"
     CDS             complement(17898..18572)
                     /gene="crp"
                     /locus_tag="PXB09_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010787261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDL5233150.1"
                     /translation="MQDMTLSTAPLENVTPPPSIHDPAVEWFLTHCHIHRYPAKYTLI
                     HAGEDAESLFYIVNGSVSVYIKDDETKEMLLTNLGTGEFVGELSLFEEKVQQRTAYVR
                     TKGPCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRQTSRQVGNLAFLDVAGRIAQ
                     TLLNLAKMPDAMTHPEGMQIKITRQEIGQMVGCSRETVGRIIKMLEDEGLISAHGKTI
                     VVYGAR"
     gene            complement(18634..18852)
                     /locus_tag="PXB09_001017"
     CDS             complement(18634..18852)
                     /locus_tag="PXB09_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDL5233151.1"
                     /translation="MIIPWQELEESTLHNILDSFILREGTDYGERELSLAEKRERLLT
                     QLKADKVVIVWSELHESLDIKDKKSFLG"
     gene            complement(18855..19460)
                     /gene="slmA"
                     /locus_tag="PXB09_001018"
     CDS             complement(18855..19460)
                     /gene="slmA"
                     /locus_tag="PXB09_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDL5233152.1"
                     /translation="MTEPKIKMPKKSVVERRQQVLEVLISLLNSEEGMQRITTERLAA
                     AVGVSEGALYRYFPSKTKMFEALIEKIEQTLTSYIHANKRQDSSANSVRAILYVILEF
                     ARKNPGVTRILTGHALMFEEELLKARVAKFFDNLELQFANILQLSKLRERKSFEDERA
                     LAGYLVNFCEGQFLRLVRSNFSYNQHQHFEKQWAFIKPLFD"
     gene            complement(19472..>19924)
                     /gene="dut"
                     /locus_tag="PXB09_001019"
     CDS             complement(19472..>19924)
                     /gene="dut"
                     /locus_tag="PXB09_001019"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDL5233153.1"
                     /translation="KQIDLKILDSRIGNEFPLPAYATEGSAGLDLRAMLNEPLTVKAG
                     ETVLIPTGISIYIADPNLAAVILPRSGLGHKNGIVLGNLVGLIDSDYQGELKVSLWNR
                     SQADFTVNVGDRIAQLVFVPVVQASFNIVQEFEQTDRGEGGFGHSGKQ"
BASE COUNT         5968 a         4156 c         4356 g         5444 t
ORIGIN      
        1 tagcgttata tccacaagat aaaacgcaaa tatgccaaaa atttcaaaaa gagcagatca
       61 gccaagcgga tttatccgat aaacaattca ggtttttaca gtatcaattt gcctgccaat
      121 tccatagttt atttaaagat aaaaaaccga ctaaagagaa atatattcac tttacccatt
      181 tggcggatta tttagattta tcaaatgtgc caaaccaaga gatttatact attcattctt
      241 tagctgaatt acctagtagc agtgaacgtg agcctaaaat tgtgcttgct aaaaacgcaa
      301 ttaatgaaaa cttaccgcaa gagttttacg gcattgtgat aaccgactat ctgtttgata
      361 ttaccggcaa aaaaatgtac ggcacgcttt attcctctta tgataatgcc cgagaggagc
      421 gaaatttaac gtttaaaaaa gaggtactgg cagagcttga ggcgaggtat tccgcttggc
      481 gatatttgcc atattccgaa catttgatgg gagcggttga tgattaaata taaagcagaa
      541 acggctttgt cgcttttggt tgccatcacg ctatttgcga ttgtggtgtt gagtttcagc
      601 cagtggcaat cggcacaaaa ccacaggcta aatcaacatt tccaacagca acaagcggtt
      661 atgattttag aaaatcagct tgccctcaaa ttagccgggt tagattgtga atcaagtatt
      721 actcaaaatc agattcgcta tcagattcaa tgctctggca atcgcttaac cattcgcttt
      781 ccgttaggca aaattgagct gaataatgat tgaatcgtcc ctcgctttgg aggacaataa
      841 ttcaattagc gaggcgttat tatgtttaca ctttaccaat ccaaccaaat ttcatcactg
      901 gcggagatgc tggtgaaaat ccagcaggta aacccacttg aagatccgtt tgagccggaa
      961 accattttga tccaaagtca gggaatggca cagtggctac aaatgcagat tgctgaatta
     1021 aacggtgtga tggggaattg cgattttctc taccctacta catttttatg gcaacagtat
     1081 cggctgttgt tcccggagct gccgaaagag aatatttttg agcgtagttc gttggtttgg
     1141 cggattatgc ggttattgcc gagttgcttg acactatcgg agtttgctcc gctaaagcgt
     1201 tatttaggtg atcaacctaa taaagaacag tatcagctta agctctatca actttctgcc
     1261 aaaattgccg aattgttcga ccaatatttg gtgtatcgcc cccattggct ggttagctgg
     1321 gaagagggca acttacaagc gatcgaaaat gagataaaaa ttgcaactgc cgctaagccg
     1381 attgattttg acttaattcg agccgatatg aaatggcaaa gccatttatg gcaacagatt
     1441 gtatctgatc tgcaatcgga atctgatgag caggttttta ctacctccca ccgtgcctat
     1501 ttgcaacaaa attacttcgc taagttagat gaccttactg aaacggaaaa agccaaattg
     1561 ccaaaacgca ttttcatttt tgggatttcg tccttctcgc cattacagtt agcggtgttt
     1621 aagaaactca gcgagcattg cgatattcac ctgttctttt ttaacccaag cgaaaaatat
     1681 tggggcgaca gtgtggaaga aaaagtgtgg caaaaattgg cgttaagcca caagatttcg
     1741 caagacgatc tggataactt attggcggag caaagaaata aactactgaa tctttggggc
     1801 aaacaagggc gggatttctt agctcaatta atcgaatttg agccgaatac catggatgtc
     1861 tttgtcgaac cagaggaaaa cagcaacctc aataaactca aaaaacagat tttcagctta
     1921 gaaaatgacg ccactattac cgatttaacc gccgataatt cactccaaat tcattcgtgc
     1981 cacagcccaa tgcgggaagt ggaagtgttg cataaccagc tcctgaattt gtttgagcaa
     2041 gatagcactt tgctgccgaa agatattatt gtgatgtcgc cggatattaa taaatacgct
     2101 ccttacattg atgcggtgtt ttctcgctac aatacgggta atcgggatcc tcgctatatt
     2161 cctttttcat tatccgacca agcatttacg caggttgatc cgattatcca cagtttcctg
     2221 caactgctgg caatgaaaga aagcccgttt aatgccgaag aactgtttga tttactggaa
     2281 gtgaatgcga tccaaacccg ttttggcttt agtacggaag atattcatac cctgcgggtt
     2341 tgggtgagaa atgccggcgt acgttcgggt gtagaaatcg agcaacctca ctggcaaaac
     2401 tacaattcgt gggaaaacgg gctaaaccgt ttattgcttg gctcaagcct gaaagaagag
     2461 caggggattt gggaaaacac ccttgccttt ggggatagct atggcttaaa tgccgagctg
     2521 gtggggcgac ttgcctcttt tattgaggct ttattagcgt gggtaaactt tctgcaaacg
     2581 ccacagccgt tggcagcgtg gcagcaggca ataaaaaatt tgactgctga tctgtatcaa
     2641 gaaaatgccg aaaatgctgc atcaatttta ttgttgaata atgtgaatga tcagattatc
     2701 gagcaaattt ccgcaaccca tttttcagac gatctgcaaa ttgaggtttt agccttattg
     2761 tttgagcagc agctcagcca acattcacag cagcttaatt tcttggtcgg acgggtgaat
     2821 tttgccacct tgcttccgat gcgggcgatt ccgtttaagg taatttgctt gctgggtatg
     2881 aatgaggcag atttccctcg ccaacaacaa atcaatagct ttgatttaat gcagtacgcc
     2941 ccgaaaaagg gagaccgtgc caaacgtgat gatgaccgct acttgttctt agaagcctta
     3001 ctttccgctc agcaaatgtt ttacatcagc tatatcgggc agtcgcaaaa agacggcaaa
     3061 gagatgctac cgtcgatttt ggtttcccaa ctgttagatg caatgaatga agctttaacg
     3121 cctgaatgca agcaacaatt aagcgatgaa gtggaagttt tggtcagaaa acaaccttta
     3181 agtgtgttta gcaaaaagaa ttttacccac ccacgagatc acgcttataa cgcagagtgg
     3241 attatcaagc cgactgttgc cgtacaagat tttcttagtg agcctttaac caatgaaagc
     3301 gtggcttcgc tagaacttga tgaattaatc tcttttgtac aaaacccgat taggtttttc
     3361 tttctaaaag tgttggggat ttcgtttaac acttatgatg acaccattga tgaaagcgaa
     3421 atttttgaga tgtcggggct ggataactac cggattttaa acgaattatt aacgataaat
     3481 ttagcacaac agcaacgttt ttttgccgaa gagcaactca aaggcaattt acctgcttct
     3541 tattttgctc aaattgccac acaagatttg atcggcaaaa ttaccgaaat gcaagcggcg
     3601 ttaagccact atttagccag cgaaagccgt attttgagtg ttaatcggga ggttgagctg
     3661 gaacgccaaa ccctcaccct aaacggcaat attgccaacc tatatcagaa tgaagtggtg
     3721 ctatggcgag tagggcattt acgagataaa gacaagattc agacttggat ctaccattta
     3781 ttattgtgtg cctatttccc tgaaaaaacg gtgaaattct attaccgaga gggtgagcaa
     3841 gttggtgtgt tgagctttga aaccgtctcg cagatagagg cattatcgca attaagcatt
     3901 tatttgaatg cttatttgga cggattatcg caagcccagt tagtgatcta cgaccgaatt
     3961 gaggaatatc tcaaaggtga tggcacaaac agcgaacaag ttcttatcga tttagcagag
     4021 aaagatgagc gagacggcag ctatctccat cggcttctcg ctcaaactaa agagctggat
     4081 tctcaagcga ttcaccaacg tactcaaagc tggtttagct taatgaatca gaaaatagcg
     4141 aaaggcgatt aactacaagc ggtcgttttt ggctgaaaat ttgcaaaatg agaaggcgaa
     4201 taataattcg cctacctata aaaatagaat tttttccgta ttttactgtc aatttattac
     4261 tacaatgcta atttcaaaag gagatgtatg aaattatctt ttcttaccca attcgttgca
     4321 gcggcttttg ccctcaatgt gatgacttac cctgcatttg cggaagttgc aaaaaattct
     4381 gaaaaaacga ccgctagtca accccaatcc caactcggtt ttgagctgat taaacagagc
     4441 attaacaaaa gcccgaatga taaagcgatt tatcaaggta ttaaacttga taatggaatg
     4501 gaagtgctac tgatttccga cagtcaagcg aataaatcgt tgatgtctgc cattattccg
     4561 attggctcaa tggatgaccc gatttctcag caaggtttag cccactatct tgagcatatg
     4621 atcttgatgg gctcgaaaaa ctatccggaa accaacagct tagacggttt tttaaccaaa
     4681 aatggcggta tgaataatgc ctcgactgct tctcaccgca cggcgtatta tctacaagtc
     4741 aataacgaag cctttagcga agcggtaaca cgactggcgg atacgttagc tttcccgtta
     4801 ttgctggaaa ccaacgccaa gaaagaggtt aatgcggtca atgcggagat ggtgcgagct
     4861 aaatcgcacg atgggcattt attgcacagt gttaatttag ccaccgcaaa cccggctcat
     4921 cctgctacca aatttgcggt aggcaataaa gagacgttat ctgacaagcc ggatagcaaa
     4981 ttacaaaccg agttggagca attttataaa cagcattatt ctgcgaatct gtttaaagtg
     5041 gtgctttatt ccaatcaatc gattgagcag atggcaaaat tggcagccaa cactttaggc
     5101 aaaatggaaa acaaacattt cagcataccg caaaccgctg agccacgtta tcgtgatgag
     5161 gacaaatcgg tatttattca atataagccg gtgaaatcca acaaaatgtt agtcattggc
     5221 tttgattttc cgaatgacga aatgcagttt aagcacaaaa ccggtaaata tattgcttat
     5281 atgttaaaca ataatactga cggcacgctt tcggattact tgattaaaca ggggttgtct
     5341 gacggcggta ttgaggcggt tagcagtgcc aatatcgggc gggatcgagg ctcgtttgac
     5401 atctatattg aactgacaga caaaggtttg agcgagcaag atcaaattat ttcattggtt
     5461 ttccaacaaa ttgagaagat caaacaagaa ggcattcaag agagctattt tagcgaagtg
     5521 aaagagagcc tgaagcagga tttccaacat ttgcaagtgg aaaaaaatat ggatttcgtg
     5581 gaatttattg ccgatcaaat gctccatttc ccgttagaac acgttatcga tcagccttat
     5641 ctgaccgaaa caatggataa cgaggcaatt aaagcaaaat tggcggcaat gaatattgat
     5701 aatgcccgca ttatgttagt cagcgatact gccaaaaccg acaagaaaac cccttatttt
     5761 gaagcaggtt attcggtggc aaaaatcacg caagaacaaa agcaaaaatg gctggatttc
     5821 agtaaaaatc cacagctcaa tttgcctgaa ttgaacccgt atttcactac cgattttacc
     5881 ttaaacaagg tcgaaaccgg cttaactaaa ccgaaattga ttaacgacca agcggggaat
     5941 ttaatctata caatgccgag cgtgtatttt accaatgaac cgaaggctaa aatcggcgtt
     6001 ggctttaata ttcgcccgag aaaagatgac ttaaagagcc tgaccgcagc gtctattttg
     6061 ggttatatga acaatttagc ccaaaccaag ttagattttc agtcttcggt ggcgggtatg
     6121 aatttaagtt tagctccggc ggcaaacggt ttagccttaa gtgcagaggg ttatacccaa
     6181 aatctggcta aattaatgct agacagcgta aaacagttca gccgctttga gtttaacgaa
     6241 gacgtgttgg cacaggctaa acaacgtttg caccaagagc tggatcgtaa cgaaaaagaa
     6301 aacagcctta atcaagctaa tgcagcatta agccgttttg cctcttaccc ttattttgat
     6361 gtgccgaaac agcgtgagat gattgatagc attacccttg cggatattga gcaactacgc
     6421 cagcgaattt tgcagcagag cagcggcttt aagttgttat cggtggggaa tttgtcggct
     6481 gagcaggttt ctgctctggc agaggattta caagcggtca taaaaaacca aaaatctgca
     6541 aatgctaccg gacagtatgt ggatgtgagt accagtcagc gtaagattaa tgtgattaaa
     6601 agcgtgccga atgaagataa tgcgttgcta atggcattta tgccgaacgg ctataacgag
     6661 ctggaaagcc ttactcgagc caaattgctc agaagcatta tttcccgttg gtattttgat
     6721 gatttgcgta ctgataagca actaggctat gtggtttatg cgacagataa tatcatcggg
     6781 aaaaccgccg gtatccagtt tatggtacaa agcccgaata ccacaccggc agggatttta
     6841 gagcataacg aacgtttctt tacacaaagt ttcgaacgtt taaaaaatct atctgatgag
     6901 gaatttggaa aatatcgtga tagcctagtg gaaaaactgc aatataaacc ggagtcttta
     6961 gcggaagagt tttctgagtt cggttcagac tttagcagaa ataacccgaa atttgaccgc
     7021 ttgcaacagg tgatcgaatt aaccaaagca ctcaccaaag cagatattgt ggcattttac
     7081 caaaaagctg tgattgaaaa gcaaggcttc gtgtttgtca gccaagctgt cggcaccaaa
     7141 accaaagctg aagacgttgc gaaatttgac ggttttgaac agatcgaaag cattgaaaag
     7201 ctacaacgag agtttgagat taaggattat tagagagtta ttagagagag ttaggggcga
     7261 aaaattttcg cccctcattt tttaatccac aattttcacc ggatataagt aagtatatcc
     7321 gaacggactt tgtttgtagc cttcaacacg tttgctggtt ggggcaaagt taattgagtg
     7381 agccacgtta atccacggag cttgctctct taagataacc tgtgcctgct cgtataactt
     7441 agtacgttct gctttatcag atgagcctaa tgctttttct aataacgcat ctaactcagg
     7501 gttagtaaag cgagcatagt tactgttgcc gatatttggc gtgccgaata gtggcgataa
     7561 gaagttatcc ggatcgccgt tatcgcccga ccaaccgtaa gttccggcgg ttaattcacc
     7621 ggctttggta cgcttgatgt aatcacccca ttcataggtg actaattttg cttttacgcc
     7681 gattttttcc cagtcggctt gaataatttc agacatacgg cgtgggttcg ggttagaagc
     7741 acgcaccaca ggctgcaccc ataattcggt ttcaaaaccg ttcgggaagc ctgcttcagc
     7801 taatagttgc ttcgcttttt ccacgttata ttctgaatcc gctaagctgt cgttatagcc
     7861 ccaaatggtt ggcggaagtg ggtttttcgc cgcaaaaccg ttaccttggt aaactacatc
     7921 aataatcgct tttttatcca ctgctaagtt taacgcttgg cgaactttca cgttatcaaa
     7981 cggagctttt tcggtattga atgccacata agcaatgttc aaacccggtt gagaaagtaa
     8041 attgattttc ggatcatttt tcattttctc aatgtcggtt gcatttggga agtccattaa
     8101 atcacattga ccggattgta atttcgcata acgggttgtt gcatccggca cgatctcaaa
     8161 aatcaaacgg tcaatgtcag gcttaccttt ccaatactct ttgtttgcta cataacgact
     8221 ggcttggtct agcacataac cgctaaacac aaacggacct gtgccgattg gcgtggtatc
     8281 taccgcttca ggtatgccgg ctttcatcat tttatccgca tattccgccg aataaatgga
     8341 ggtgaaatcc ataccaaggc tggataagaa tgacgcatca cgtttggtta aggtaatacg
     8401 aacggtgctg tcgtccactt tttccaccga tttcaataat gtcgggaatt tcattgcgtt
     8461 gaaatacgga taagtgccgt tagagacggt gtgatacgga tgatttttat ctaactgacg
     8521 gttaaatgaa aatactacat cgtccgcatt caattcacgg cttggagtga agtctttgtt
     8581 tgaatggaat ttcacgcctt tgcgtaattt aaaggtgtaa gttaagccgt cttcgctgat
     8641 ttcccagctt tctgccaatg ccggttcaat atcggttgta cccggcacaa attccaccaa
     8701 gcggttgtaa atttgttgcg agctggcgtt ataagataaa ccgtccatca ttaaaatcgg
     8761 gctaaaaccg gttggcgaac ggctaacgca gtttacaaag gttttctcgg tttgcggttt
     8821 tgctgctgcc gcagtaggtt tattttcgtt gcttttatca tcgcaagccg ctagagctaa
     8881 taccgctaaa acgcttgcac taattttggt taacgttgga aatttcatat tattctccgc
     8941 ttaatcttag gattaactta cgaagattac cttttccaca atgaggagta aagaacaaaa
     9001 agcattattt ttgcaaatca atccatagaa ttagataccg tcaacgtcat tgccacccgt
     9061 gatccaagta aatttgccga tacgccacaa aaacaaacta aagatgcact tttggtaaaa
     9121 caagcgacga gtgtggcggc ggcattaaaa gcgttgccga atgtggatgt gcaaggaggg
     9181 gcccgtgcga ttgtgcagaa gccgtctatt cgtgggttga gcgataatcg tattgtgcag
     9241 gtgattgacg gagtgcgtca gaattttgat ttggctcacc gtggttctta ttttgtgccg
     9301 atgtcattga ttcaagaaat tgaagtaatc aaaggtccaa gcagctcgtt gtgggggagc
     9361 ggtgccttag gtggggtggt ggcaatgcgc acaccgaatg cgttggattt attgaaaaat
     9421 aatgacaaat tcggggcaaa aatccgtcaa ggttatcaaa cggcgaataa tctttccgaa
     9481 accgaagcct cggtgtttgc agcaaatgat cggtttgatg ccctgctgag tggtttctac
     9541 aataatgctg acaatttgcg tagcggtgaa ggcaaggaac tgaataacac gggctataag
     9601 caagccggcg gtttagtaaa attcggctgg caaattaacg atactcatcg tttggaatta
     9661 tcccatcgtc atagccaatt taaacaaact gcaccgggta ataacgaggt agaaaatcaa
     9721 tttaccgata atgatgttag tgcacaaatt agtgcttggc atgcggctaa tcctggaaat
     9781 ccaagtaatc cagtatatct tgcgaaaatg ttagcctttt acggtcaatt acattcaagt
     9841 cttggtagtg tgagttattt aagtgatcaa aaaattaccg ataaaagcac ctcacttaac
     9901 tactatttca acccaagcaa tccttatttg agcacacaag tgacattata tagcaatagt
     9961 accactgaaa acgaacatcg aaaaataagt ggtgtggaag atcaaactaa actaagcact
    10021 cgtggtgtga atatccgtaa tcattccgaa ttgtcttggt tctccttggt gtatggcgtg
    10081 gattatatgt tggataaagt agccactcag cgtgggagaa ataatacgga cgcacaatac
    10141 cgtgctaatc cttatgatgc taaatctaaa actacaggtg cttatttaat tgcacatatt
    10201 ccgctgtttg atgaaaaagt ggtcttttct ccgagcgtgc gttacgaccg tttcgatact
    10261 tcaagtgaaa cggtgaaata taaagacagc cattggtctc ctgctgcaaa acttacttgg
    10321 aaagcgacaa attggttgga tttaaccgcg aaatataacg aagctttcag agccccttct
    10381 atgcaagaac gatttgtgag cgggtctcat tttggtacca cagtgagagg attacctatt
    10441 aataatattt tcttaactaa ccctaattta cgcccggaaa cggcaaaaaa taaggaagta
    10501 accttcaatg tacattttga taatgtcatc tcgcaaggag ataaatttaa ctttgaagcg
    10561 acttatttcc gtaatgatgt gaaggatttg attaatcttc aagtattcaa agcaaatcct
    10621 acaagcccaa tggaatttat tcccactcgt tcccaatatc aaaatattgc gaatgcacgt
    10681 ttgagtggta ttgaattaca aactcgttat caaactgaac gtttggcagt ttttgctaac
    10741 tacggtagta caaaaggtaa agataaagac agcggggaag ccttgtcgaa cattgctgca
    10801 agcaaaatcg gcttcggggt caattatgcc gtggtgcaag acaaattcac ggtgggggca
    10861 aacgtaaccc gttatcaagc acaacatcgt gtgccgaaaa accacggcgt gacttaccaa
    10921 ggctatacgc tgaccgatct acacgccact tacgccccat taaaaggcga atggaaaaac
    10981 ctgcgtttag acgtggcggt tgaaaaccta ttcgataaaa aataccaacc ggcattcagc
    11041 ttaatggaag gcagcggtcg taatgtgaaa ctcagtgcgg cttacagctt ctaatgtctt
    11101 taacggaaga cggcacaagc ggtcgttttc cggttatttt ttgcaatatt aaaagggagt
    11161 tactatgaaa ttttatccgt cgctgatcgc aagtgcggtc agttttgccg ttgttttgag
    11221 tggacaagcg gcagtgaatg tgccggatgc cggctcgtta cagcgtgaat tagaccaacg
    11281 tcaagctcaa caaaaagtca aaccgagtgg cgaatggttt aatcaagcgg caaaagcacc
    11341 ttataccgca acggacggtc aagaactgac atttccatta actcaggtac aagtttttga
    11401 tcgaaccaac caagaaatct ctaccccgga attagccccg attttggcaa actatgtggg
    11461 taaagcggtt tcgctgaccg atttaagcaa cttggcaaat gagatcaccg agttttatcg
    11521 tagccacaat tatctggtgg caaaagccat tttaccgcca caggaaattg aacaaggtaa
    11581 ggtgaaaatc ctgttgttta aaggcaatgt cggtgaagtg cggttacaaa atcagagtgc
    11641 tttaagcgat aaatttgttg cacgccttgc caacaccaca gtgaatggtt cggaatttat
    11701 cctaaaagac gaattggaaa aatttgccct cacgatgaat gatgttcccg gggtgaatac
    11761 cggcttggag ctttctgccg gtaagcaagc aggcgaggcg aatttgctga ttaagctcca
    11821 aaatgccgag cgtttctcag gctatgtatc ggcagataac caaggcaata aaaataccgg
    11881 acgttaccgt ttagccacag ggataaaagc caataatctg ataggttggg gcgatgagtt
    11941 gaaagtggat ttgatgagtt ccaacaacgc taatttaaaa aatgcgcgtt tggattattc
    12001 gagcttgatt gacggctacg ctacccgttt gggcttaacg gcgaattatc tcgactacga
    12061 attaggcggt aactttaaag ccctgcaatc ccaagggcat actcacaatc ttggggctta
    12121 tgtgttgcac ccgacaatcc gcttgccgga ttttcggtta aacaccaaag tcagctttaa
    12181 tcatcaacgt ttaaccgaca aacaacaagc ggtcaatgtg gcacaaaaac gccaagtaaa
    12241 cagcttaacg gtgggcatta acgggtcgtg gaattcgctt aaagacggca caagctattt
    12301 ctctctgtct gccttgttcg gcaatttagc taaccacacc aacgagcaag cgcattatgt
    12361 ggcaacagat tttcagccca aatcccgttt tacggtctat caatacagcc tgtctcacga
    12421 acaagcgctg ccaaaatcct ttgccttcaa ccttggcgtg aacgggcagt ttgcggataa
    12481 aaccctcgac agctcacaaa aaatgttact gggcggttta tacggcgtgc gtggtcatca
    12541 agccggtgtc gcttcggtgg atgaggggca tttagtgcaa accgaactca agcattattt
    12601 accgctcttt tccaaaagcc tgctgaccag ctcggtcttc tatgattatg gttggggaaa
    12661 atactataaa cacagcggat ttttggcgcg tggtgtaaac aatagcgtga aattacagag
    12721 tatcggagca gggctttcgc tctctgaagc aggcagttat gccattaacg ccagtgttgc
    12781 caaaccgctg ggtaaaaaaa tcgagaatgc agataaacac caattctggt tctccgccat
    12841 caaaaccttc taaggagaca aactatgttt aaacgtaatg caatttctct ctgcattttg
    12901 accgcttgca gcggtttagc ctatgccaat acagcagatt tgccgcaagg tgaaagggtg
    12961 cgtgtcggga cggcaacgat tgagcgcaca accgataaaa tgaccgtgaa tcaatccagc
    13021 aataaagtac aaattgattg gaacagcttt gatattggta agaataaaga agtggaattc
    13081 aaacagccga cagagatggc ggtggcatat aaccgtgtta ccggcggaaa cgccagtcaa
    13141 attcaaggca agctgaccgc aaacggcaaa gtgtatttag ccaacccgaa cggtgtactc
    13201 atcaccaaag atgcggaagt gaatgtgggc ggtttgttag tgaccacaaa agatttagaa
    13261 aaaatcagcg aaaacggcac aaaagataaa ttcagtcgca aattagcgaa agaaggcaaa
    13321 attcttaacc aaggtaaaat tacggccaaa ggcgagcggg cttttgtggt attggtgggc
    13381 gacgatgtgg ctaatgaagg ggaaattaac gccaaaaatt attaccacaa agaaacgaaa
    13441 aaagtcaccg aatgttatga cgattcttgg agcttggtaa aacaatgcta cgattttgat
    13501 aaagaaatcg tgaaaagtac cagtggagaa gtgcatttat cctccggaga aaatgtcacc
    13561 tttactttaa gcgaccgcta tattgatgtg gcgttagacg ataatacggt caatagcatt
    13621 atcaaaaatg acggggcaat catcgccaat ggtgacatta ccctcactgc caaagggcga
    13681 aatcaagcct tagacagctt aattatcaat aacggcgtat tgcaagccaa taaggtgcaa
    13741 aataaaaacg gtacgatcat tttatctgcc ggtgaaaccc aattacacga aaaaagccaa
    13801 attaaaggcg agaaagtgag ctttgccgaa gcttcttatt acggtccgac agaagacatt
    13861 aaagtggttt ccaaaaccgg ctcaaaagtg accgcacctg tgatcgattt caaaggtaaa
    13921 accgtgaata ttcaagggga atttgggcgt gaagacagca ccgatctcta taacgatgaa
    13981 ctacaaatcc tcaaaaccac ggtgaatatt gaagtcccga atacggaaga tattcgcatt
    14041 gcagataccg acaacggagg tagcggttcc tttatacaag cgggtgcttt agcctcatta
    14101 cttgcaaata acggacgggt taatgtacag ggcaaaggtt ttgatgtctc aggcaagttg
    14161 aatgtgaatg cctttaaaca aacggattcc gtgctgaaat ttatcaatca ggcgggcatc
    14221 aatatccaca atgccgatat tcacgcaaac gggcgtttat tctttgtgac aaacttgccg
    14281 aatgacaccg atttccaatc gaatatccgc attaccgaca gcaaaatcaa cttaggcaac
    14341 ggctcaatgg gctttggtcg cagtagcaaa cgttgggaaa tgcacgatgt ggttcgacgt
    14401 gccgatacgg aactgcgtaa aaaattcaat ctggatatga aaaacgtgga attaaaccaa
    14461 gtggatgatt ttgtggtagc gggcggtttc caacaagtta atttggataa cgtgaaagcc
    14521 cgtggcaaaa ccaacttcta tctggattcc ggcaactccc gcatgtttgt cggtgagcag
    14581 atttatgaat atggcgtaac cgatattgaa aaacgcaccc aattggcgaa tttagaccag
    14641 cgtagaaaac gttggaattc ggataactat gatgagaccg atctcaactg ggaatacaac
    14701 caacgctttg acggctttgc agcaaaacac aatcaccgcg cgccgattgc cgatacggaa
    14761 atcaatattg ccaatagtga tatcagctta gataacggtt ttgtgcattt aatggcagaa
    14821 aaaatcaatc tggacgacag caaaatcaat atcaccttca accaagacaa cagcttggat
    14881 gaaagtaccc aaatcaaccg cttaggacta aacggcaaag tgtcgatgaa aaacagccat
    14941 attaacgtag tgggcgatga aaaagacggt atctcaccgg ctcgccatta tgccacgatg
    15001 ttcttagtgg gggagctgct tggtgaaaag agttctattt tcctcaaatc ccaccaaggt
    15061 gcagtattga gaaccgacag caatgttaca attgccggta aaaacagcaa agacgacctc
    15121 aaaattaccg ccattaccac cggtaaaaaa atgggcaatg aaatcatcgg accggacggc
    15181 ttgccaacct cggaagataa cgatgccaac gccagcaaca ccgcctttgc catcggctat
    15241 gaacctaacg ctacggctat cgtcgaaaat gcaagcatta ccgcattagc accaaacggc
    15301 ggcttggcat acaccggcac gtctaaaacc caaattgacg cgaaggataa tgctaccttt
    15361 accttctttg aaaaacctcg agccggctat gacaaattgc ttggcgacat caaaggtaac
    15421 cccgataaat taaccccacg cgatttcgcc cgtttatacg acaacattaa aggcatcaaa
    15481 gccagcagcc tatccgaaca acagcttggc ctagcagaca ccgcgaagaa aaccagcgaa
    15541 cacaccttag caaacagcct agacgtagaa aatttggttt cagtgacagt gtgtgatgag
    15601 cagaataagt gtgaggagcg tatgttaggt aacaaaaata ccaatgctaa agttattgtc
    15661 ggagatatca aatttgagta gcgttgaaga aagtggtaga agctcagact tgatctgata
    15721 aagcactata aaaagtgaga gtttcccgtt tagaatatga gtgtcaaaat tcaatctaaa
    15781 caaaaaggaa actctcatgt tttattactt acaatcccct cattaaacac aagaccggtt
    15841 tattaaattt agcagaagaa ccgggcaata tctctcaagc ctgcaatgtg gtgggtatga
    15901 gcctagatac attctattgc tatcaacaag cggttatttt tggcaactaa tttgcaaaaa
    15961 aacaataaaa tccgaccgct tgtagagggt taatccgccc ttagtgaaat ttcaccgatg
    16021 ccgaaatagc ggaggttgtc gccctgtttt agaatgagtt cgccctgctc gttaatgcct
    16081 tgcgaaatgc cgtggatttc ttcggcttcg gtaatgagct taaccgcttt atggcggaaa
    16141 aggtcgaaac tttgccagcg ttcggcataa tgagcgaagc cgacaagcgg ataaattttg
    16201 agattttttt gcaattcata ggctaaacgg caaaccaatt cgttgcggtt gaaatgatat
    16261 tgcgataaat ctgcccacgc ttgcgtcaca atattttcat ccacttttgc cattcctagg
    16321 ttcagcccaa tgccgataac cacatctaaa ccattgcgat tggcttgggt ttccaacaaa
    16381 atgcccccca tttttttgcc ttggtaataa atgtcattcg gccatttaat ttgaatatct
    16441 tttacatttt gaacagtaag gctttccgca atgatcaagg ctaccactaa acttaagggc
    16501 ggtaaatctg ccgcctgctc catcgggtaa tgccataaaa tcgagaaata gagattttca
    16561 ctctcgggcg aataccaagt tcgacctcgt ctgccacgtc cggcagtttg tttttcagcg
    16621 aggcaaaccg tgccgttttc caaacgttgg tgatgagtga gcaaatattc attggttgaa
    16681 tcaatttcat cgaacacaac ggcttgcccg caaattaaag cattttggat ttgagcttgg
    16741 ttaagtttca ttatttcccc acttagcgag tgattttttc gctatcgacc tcaccgtttt
    16801 taccgataaa acgcacttca ggctgaattt ctaccccaaa tttttctttc actctctggc
    16861 gaacggtttt ggctagagcc aagacatctt gccctgttgc attttcttta ttaatcagca
    16921 ctaaggcttg ctgggtatgt accgccgctc cgccaatttg taagtctttc agcccggttt
    16981 ggtcaattaa ccaacctgcg gctaatttta ccgttccatc agcttgaggg tagtgaggaa
    17041 tggctgggaa tttggcttgt attggtgcaa attgttcgtt tgaaatcacc ggatttttaa
    17101 aaaagctgcc ggcattgcca aattcgtcag ggtttggcaa tttggaggag cgaaccgcac
    17161 agacttcatc aaaaatctgt attggcgtaa cggtttccgg attgagttgg gctaatgatc
    17221 cgtaacttag caccggtttc cacgctttgg ctaactttaa gcctaccgag ataatcgcaa
    17281 attcatcacg gtattggtgt ttaaacacac tttcacgata gccaaattcg cactcggatt
    17341 tggatagctt aaagagttct ccggaacgta aatttaacac ttccacgaaa tcacatacct
    17401 gttcaaattc aaccccataa gctcctatat tttgaatggg agcagagctg gcgacacccg
    17461 gaattaacgc cagattttca atgccggcaa tattgtgtgc caacgtccat ttaaccaatt
    17521 cgtgccagtt ttccccacct tgaacgtgca aatagtggaa atgttcgtct tcgtggtgcg
    17581 taatcccttt gagtttattt actaacacca caccgtcaaa atcctctaaa aacaaaacgt
    17641 tagagccttg cccgagaatc aagattggca gttgagcgtt aaaggctttt tgccattcgc
    17701 tcaatagctg ttcgactgtg gtaaattcaa taatttgggt cgcttttgca ggcaaatgga
    17761 aagtgtgaaa aggggttaag ctatgtttca tcatcaaatt agttagttaa gaagtggaaa
    17821 taacaagcgg tgatattttt acaaaatttt gcaattaaga ttttgggcag gcacaggatc
    17881 tgcccctaca ttcagaatta ccttgcccca tataccacaa tggttttgcc gtgagcagaa
    17941 attaagcctt cgtcttccaa catttttata atgcgtccaa cggtttcacg ggaacaaccg
    18001 accatttgcc cgatttcttg gcgggtaatt ttgatctgca taccttccgg gtgagtcatt
    18061 gcatccggca ttttagctaa gttgagcaag gtttgagcaa tgcgaccggc aacgtctaaa
    18121 aaggcaagat taccgacttg gcgtgaagtt tgacgtaaac ggcgagccat ttgtgccgat
    18181 aaatacatta aaatatcggg gtttaaatgg actagttgtt tgaatttttt ataggaaatt
    18241 tccgcaattt cacaaggacc tttagtgcgg acgtaagcgg tacgttgttg gactttttct
    18301 tcaaataaac ttaattcacc gacaaactca cctgtgccta agttagttaa gagcatctct
    18361 ttggtttcat catctttgat gtaaaccgac actgagccat tcacgatgta gaaaagtgat
    18421 tctgcatctt caccggcgtg aatgagtgta tatttcgccg gataacgatg gatatgacaa
    18481 tgggttaaaa accactccac cgcagggtcg tgaatagagg gcggaggagt tacattttcc
    18541 agaggagctg ttgaaagtgt catatcttgc atagtatttc ctataactct tatactaggt
    18601 taaattttta gaattttaac acgaaattaa aggttagcct aaaaaagatt ttttgtcttt
    18661 aatatcaagg ctttcgtgta attccgacca aacaatcacc actttatctg ccttaagttg
    18721 tgtgagtaat cgttctcttt tttctgccag agaaagttcc ctttccccgt agtctgtgcc
    18781 ttctcgtaaa atgaaggaat ctaaaatatt atgtaaggtt gattcttcga gttcttgcca
    18841 aggtataatc ataattaatc aaataaaggc ttaataaatg cccactgttt ttcaaaatgt
    18901 tggtgttggt tatagctgaa attagaacga accaagcgta aaaattgccc ttcgcagaaa
    18961 ttcactaaat aaccggctaa ggctctttcg tcttcaaagc tcttgcgttc acgcagttta
    19021 ctaagttgca aaatattggc aaattgtaac tccaagttat caaagaattt tgccactcga
    19081 gctttgagca actcctcttc aaacatcaag gcgtgtccgg tcaggatgcg ggtaacgccc
    19141 gggtttttgc gagcaaattc taaaatcaca tataaaattg ctcgcaccga attggcactg
    19201 ctgtcttggc gtttattggc gtgaatatag ctggtgaggg tctgctcgat tttctcgatt
    19261 aacgcttcaa acatcttggt tttacttggg aaatagcgat acaacgcccc ctccgacacc
    19321 cccaccgcag cggctaaacg ctcggtagtg atacgctgca ttccctcttc agaatttaac
    19381 aagctgatta acacttccaa cacttgttgg cggcgttcca ccactgattt tttcggcatt
    19441 ttaattttag gttctgtcat tgccaatcct attattgctt acctgaatgc ccaaaaccgc
    19501 cttcgccacg gtcggtctgc tcaaactctt gcacaatgtt aaaacttgcc tgaaccaccg
    19561 gcacaaagac taactgagca atacggtcgc ccacgttcac ggtaaaatca gcttggctac
    19621 ggttccaaag cgacactttc agctcgcctt ggtaatcgct atcgatcaag ccgactaagt
    19681 tgcctagcac gatcccgttt ttatgcccta aacctgatct tggtaagatc accgctgcca
    19741 aattcggatc ggcgatataa attgaaatcc ccgttgggat caacaccgtt tcacccgctt
    19801 ttaccgtcag cggctcgttg agcatcgccc gtagatccaa gcctgccgag ccttcggtcg
    19861 catacgcagg taatggaaat tcattgccga tacggctatc taaaattttt aaatcaattt
    19921 gttt
//
LOCUS       DANLTI010000037        19920 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.037, whole genome shotgun sequence.
ACCESSION   DANLTI010000037 DANLTI010000000
VERSION     DANLTI010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19920
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.037"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1083)
                     /locus_tag="PXB09_001020"
     CDS             complement(<1..1083)
                     /locus_tag="PXB09_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5233154.1"
                     /translation="MGIMSKSISIFNHKGGIAKTTTAFNVGWSLANQGYQVLLVDLDS
                     QCNLTGLVLGYDQCKEDSDLALFYNNRHHLTMEGIVEALINGQSPDNYLSGNVGQITQ
                     TLNPNLFLLPGHLNVSELDSQISVSLKIAAGVPATRNIPSNLPTLIKKVAEQNNIDYI
                     LYDLSPNVGGLNEVILMSSDYFIVPTSPDFFCWQAVGSLAKNIRKWHNELKAFKELNG
                     FNQSSYAIKNKPQFLGTIQQRYRPRKGQPAKSFEKWIERIRNEVITNFVPVLKTIDCA
                     IDDTAIYAALKSTNSDLEPFDLAHIADFNSLIAISQELRVPVFSLTKEQIKNSGQFGH
                     ALNTMDESKENFDQEFQSLAERIIQLT"
     gene            complement(1148..1579)
                     /locus_tag="PXB09_001021"
     CDS             complement(1148..1579)
                     /locus_tag="PXB09_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233155.1"
                     /translation="MKKMAIVALSAFFSMNAFANNNVVYSCTTTDNQTLKVTKEGGNY
                     VYSHGNTTFKNPVKEALKNPASEIAGGSQFTTISLELRNAGKSYIVGHIEADPKSPFE
                     ASVQIQDIKTGNDITSFECRSDKPIRHNFDRKLMRKSGFAA"
     gene            complement(1583..3685)
                     /locus_tag="PXB09_001022"
     CDS             complement(1583..3685)
                     /locus_tag="PXB09_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5233156.1"
                     /translation="MKKAKSLKFLTACIMLTTMSGYANSNTVNVGNSISNFIENTTGY
                     RTGNLGVSGNNALTEYYPVLSDYMHYSIGGGSAISAPASRGRPNQYGIGIGWKSNLTC
                     GNFDIKLSIKNQLNGITEGFKDLYGNIIESATGAVASLPAMIIQRANPQLYDILSNGL
                     YQGKLDFNNFKTSCEAMSNQLADLAMDSKLAKMAGLHRAAEIAETEPDAMAAKKKMDK
                     KDAEKGIPWVGGEQRGGKNQKPMAIVADIVGAGYNLALGRGPLEKGDIPIASCDGMLC
                     TEWKNPSEAAAYASEVIGETFLDACETCEQSSSGAKAGKGIAHFIEQTTIEKATKLEA
                     ALNHLDSLTPEQLNSLSTSTVSVTKGVLEAIAASPDAALLGARLSQELAISKEMEKLL
                     LIRRAMLAGMREPNVIKSSLVEEAERNLKLLDREIEQVKLEMELQRSINGNTALAAIT
                     QQMNEQALAIDDNAMGDGNRRFANLSNQAGANNLNTSGIANSAQNAVGDRYIAIPKSD
                     GSGMSDFYGAYKASPTNIVSNVNVGSYTQIAQMNGNANEQATALIKQFEGYLSHGKWD
                     VNANRAGYGSDTYTTADGMVHRVQKGTYVSREDAERDLARRMPQFMNVARGNVGADVW
                     AKLTPQAQAALTSVSYNYGSLSKLESVQKAAAVSAQSGDMTALANSIRNLQGHNNGVN
                     ARRRNQEADYIINAPKGN"
     gene            4960..5391
                     /locus_tag="PXB09_001023"
     CDS             4960..5391
                     /locus_tag="PXB09_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5233157.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEHKKGNPFYACRVAAL
                     VGESDSPEYRYFDMNVVGKETETLIKKCQKAVSEEKKVLVSFVMADLWFDTFTYSSDS
                     KYHKKGDTGVSLKGRLIRIKMIKIDGEIVYQEKPKADEQSE"
     gene            5497..6177
                     /locus_tag="PXB09_001024"
     CDS             5497..6177
                     /locus_tag="PXB09_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233158.1"
                     /translation="MNSLQQFVKTLSPTVLNGRHFDGIVGDVVFVQNGYGKWLDQGFT
                     IIGFDKSIEEKDWIYLDWDCYWFGKNPAQVIPEKSWAQRSWLARAYSISLERFNSLGL
                     EREYNIVSDWDNPIYGTDIQLIEHSKEFFRWTEADDRGIFLVHNEMAFHFFKKEIKAS
                     SEPEYYQPIETFWKDATVVLNIEDLDMLERVGLEQTNTPALAKLTTFVQAARNEISNG
                     NIVFYRAF"
     gene            6203..6610
                     /locus_tag="PXB09_001025"
     CDS             6203..6610
                     /locus_tag="PXB09_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5233159.1"
                     /translation="MNRQGIYINGKQVFDSKGKEINSVQIINSTVQTVVGINKGYISM
                     AAGNNVLIVDGQTIALEPSPTINIEVFGNVTNLNAGSENVRVTGDAKSVSTVSGDVTV
                     DGNVTSNVKTVSADIHCKSILGKINTVSGDIYR"
     gene            6690..7052
                     /locus_tag="PXB09_001026"
     CDS             6690..7052
                     /locus_tag="PXB09_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233160.1"
                     /translation="MEDSFFDFDDISCYLGQWEAILEEYSDIVSIEDFWLVAKEFETV
                     PHFGNLYQELVISRLIQRFCTELDIEQDSDLVEFDYYINAIDTHFYINRQRICDIDDW
                     NEMLDKIRKEMTPAKLAA"
     gene            7165..7425
                     /locus_tag="PXB09_001027"
     CDS             7165..7425
                     /locus_tag="PXB09_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233161.1"
                     /translation="MTFELGRVCTTRAVAECFNQNALVELLNRYCYGDWGNLCEEDKL
                     ANQEAMKYGGRIVARYDVDDESLYIITEADRSCTTILFSYEY"
     gene            7584..8213
                     /locus_tag="PXB09_001028"
     CDS             7584..8213
                     /locus_tag="PXB09_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233162.1"
                     /translation="MKTKISLMTVFMLGLSGCVHQQDTAQNSDEITPMPDSLLTPQMQ
                     QLPPQDRIVSKDIYQEQTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVSNPKN
                     RFTANVQQGLRSTLTNTGLDLCYPPIGEQGNAVQTLFTRPLPKVHYQFGPMKLYEALQ
                     MIAGPAYELTLNDISRTICFKARESSFQNPHKPAVAVTTTTIKTEVIEE"
     gene            8213..8986
                     /locus_tag="PXB09_001029"
     CDS             8213..8986
                     /locus_tag="PXB09_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233163.1"
                     /translation="MREISMKFNLCRKAIPLAVLPLLLSFALPTLAQNMQTETVSSSQ
                     STLQKQSQHQQSQLSDSLKQAKEWGLTVEEWSRYTELMKGERGMWSPNLDPLTALGIE
                     ARTAEEREKYARMLAKKYYERVSKELDFDKVYRQEFEKLYPNELPFEVEPHISQSVGR
                     VVYFTRFDNCDSCKSDLGKILSYANNQTPLDIYIVGQNISDNDIRKWAADNNIDPIKV
                     SKRLITLNHDKGYWLRYSLGKMPAAYQIKQDGEWTSLVY"
     gene            8965..9735
                     /locus_tag="PXB09_001030"
     CDS             8965..9735
                     /locus_tag="PXB09_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDL5233164.1"
                     /translation="MDITRVLVIVAVFLSNISISQAKPFNGFGSEIDSYIRMAAQRYQ
                     VSEAMLRGFVKMEDGWYGNISPTGATGVGQFTMGTWNWLSETERGKQLGMKLITAKNR
                     GSYADPRRDKYTNTLATALLARWHIEQFQLRNIPITDENLYMAHNIGLDGLHRAMMGK
                     ATKEDILNMRRNGMKSWMTVRDFLNYQKGRFLAHKQEANFMTVSKQGHIHTGVAAFVY
                     PTSQMGKSVKWVEPDNKMIWVEPKNAMVWVEPQNTLQR"
     gene            9738..10244
                     /locus_tag="PXB09_001031"
     CDS             9738..10244
                     /locus_tag="PXB09_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5233165.1"
                     /translation="MQNKVKVLLFSLYVSHFSWADLTVIADFGGESAVRFYESLQPEH
                     DENAPNYPNSISASVSEADILPIVSHKLSPGTIKEKPFDLTGMQAIFLIGADNTSAQW
                     LQQNREKLITLNATGLVVNVQTLSELNQLRDIVPELRILPTPGDDLAERIGIAHYPVL
                     ITESGVSQ"
     gene            10244..12445
                     /gene="traD"
                     /locus_tag="PXB09_001032"
     CDS             10244..12445
                     /gene="traD"
                     /locus_tag="PXB09_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDL5233166.1"
                     /translation="MSAKHTLEAWLRPPVEFFPAAVHASCAFVSAAAPWSLALHPSIG
                     YSIAAGFGALSFYRAKQGWQIVRYHRNLKRLPNYSMTSKQIPVSNKYLFVGKGFEWKP
                     IHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTHLTSKDSRWNLVRPLPPVE
                     GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTADERE
                     VVVFFDPKGDADMLKRMYAEAKRAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAG
                     RISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQFVQNIDSLFLDYAE
                     KFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLAS
                     AVRYDRTYFDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIV
                     YIGLDALSDATVAAAVGNSMFADLVSMAGHLYKFGTNDGLPGAFKEKSKPVKINLHCD
                     EFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGSKPKAGQTLGNFNTLYMLR
                     VKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVP
                     ANITNLPKGQAFALMDGSKLWKIRMPLPAVDKDDMMHQSLRELTDYMRKNYHVVENWW
                     QPAFTEYTPSRDIAEAFEAMSEPQYKTQIDHQVDNFGIDEPYDIDEEENDE"
     gene            12438..12791
                     /locus_tag="PXB09_001033"
     CDS             12438..12791
                     /locus_tag="PXB09_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5233167.1"
                     /translation="MSSAKMREEKRTNLLDLPNKYRNFNGEFSASCGLDNAEELLIHS
                     QSYFIEWFEQGYSFHQFAEKFADQGLSLWSADEVSMRHSDKSKDIFAFYLAFDNNPSG
                     YILVQCQLDREDSLQ"
     gene            12788..13483
                     /locus_tag="PXB09_001034"
     CDS             12788..13483
                     /locus_tag="PXB09_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HDL5233168.1"
                     /translation="MSEETKARRKSGLINLIFGKINMSLAAIAVSLIFSIILEWIGIA
                     FWWPQEGHLHSQTMMLNEMQWLSDDFSQSLFAKSSTAFATSIIENVYNWLFVYTGVKE
                     WLTSPGNGSMEQWVHHYGRAYIESVIYVVITFIIRLIIIVFTSPLFLLTALSGLTEGL
                     SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVLYLSIPFSIHPNIILVPAACLFGL
                     SICITAASFKKFL"
     gene            complement(13515..13898)
                     /locus_tag="PXB09_001035"
     CDS             complement(13515..13898)
                     /locus_tag="PXB09_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233169.1"
                     /translation="MRYQMRYLALFLVVFPYVAHSLPSAQKVGNICHAENAQYNYGGL
                     WELSLRGKLICNYWQFLGDDERKKIELQLDEYGEFPIWNTSEQISEQIIEDDEYPQYW
                     EVEDWEDSDWDTESENEDTEATTEE"
     gene            14085..14411
                     /locus_tag="PXB09_001036"
     CDS             14085..14411
                     /locus_tag="PXB09_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAQPRD family integrative conjugative element
                     protein"
                     /protein_id="HDL5233170.1"
                     /translation="MSISTSLRKGIVVLVTLSCLPALASTEQEQLAQAIKQLEAAKLS
                     LQRAEKVAKASPKTREYFNYSAIHSDIETVKKGIQQYINPSRALPRDPNVLRTLSDDY
                     SKLRGQ"
     gene            14411..14644
                     /locus_tag="PXB09_001037"
     CDS             14411..14644
                     /locus_tag="PXB09_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233171.1"
                     /translation="MSYSPANAFSVASGIDPFRLKIMIAIIFLSLLLLAVAWALNSGY
                     KGFSFRDKSPFSLLVLFLKGVALLACVTYFFIY"
     gene            14659..15048
                     /locus_tag="PXB09_001038"
     CDS             14659..15048
                     /locus_tag="PXB09_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2976 domain-containing protein"
                     /protein_id="HDL5233172.1"
                     /translation="MNRIKSLTKHLHSRYLAVMLFFWGSLQNAFAAGPDASKIPDFQI
                     PGVDSNTKDPMEIIWIVLKGLVTLGAVILAAVAILTVVKALIGIYNEATSENGKKGWG
                     HFILALIIGFIVIFFCLWLVKLAVGLF"
     gene            15071..15436
                     /locus_tag="PXB09_001039"
     CDS             15071..15436
                     /locus_tag="PXB09_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HDL5233173.1"
                     /translation="MSEQDTTIPFLPTRLNREATVYGGMTVSEFGISAGLGFMLGLIV
                     GLFLWILTDFWLLIPAMAMLLCIATVLIGKGIVAAVKRGKPEAYLNRLVEKKMDDLFN
                     GHKFIKREGFWSIRRYRRK"
     gene            15440..16084
                     /locus_tag="PXB09_001040"
     CDS             15440..16084
                     /locus_tag="PXB09_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233174.1"
                     /translation="MSQLKSQLHEKDKHIKTTRIFAFLFFIIILVLAGVIYTFPSRLT
                     IYNPPDLRAGSQRAWWEIPKPTIYAFSYQIFQQMNRWMTNGEEDYEKNITTLKPFLTP
                     HCEAFLRQDYKDRLRNNELRSRTRMVYEITGRGYSEDKVTIFSEDSWAVNLDLSVDEH
                     FQGQPVKRVYIRFPISIVRMDVDSAQNPWGLGFNCYHSIPKLLEGVEPKTEEKK"
     gene            16084..16968
                     /locus_tag="PXB09_001041"
     CDS             16084..16968
                     /locus_tag="PXB09_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233175.1"
                     /translation="MKRLPILLVSLLIGFSGSSLADVLMKWERKPLPVALQVEKERII
                     FVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFPSTRIEFRDVTTGEIFLFDLTAA
                     SKVANPEEAIRVVFDGTVEKQSFSSNRDDESSDLPIANSRPQLPVPAALTRYAAQSLY
                     APLRTVEPLDGVRRVAHRLPKKITKLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNT
                     QITLDPRELQGQFYAATFQHNWLGGYGENEDTTTLYLVTEGYANNALIPETRPVKLVS
                     KKVKRTTKVETKPAQSAK"
     gene            16980..18434
                     /locus_tag="PXB09_001042"
     CDS             16980..18434
                     /locus_tag="PXB09_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233176.1"
                     /translation="MKANKALFVILGIVFILVGGIVYALFGRSESVPQPTQQEILDIS
                     IKDLTPEQVRTMGIQGDTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRI
                     NDAVNNETRKLQEQIADLKMQLFDMATLVNNKPTTQESTPQVEAQPNTVPNKGFGTAG
                     DKLPIGGATMSNVDTSGMYWVEPSDQISLDASGKPVSGNTVATKFGFPKDFNGGQSAG
                     NNEKKGLPFFPETDTVTSSQGTAGNARGKNQMTSVYTIPSNSTFLDSVAMTGLIGRIP
                     IDNRVSDAYPFKVLIGRENLIANGIELPDVDGAIVSGTATGDWTLSCVRGSVKSMTFV
                     FNDGRIVSTSNKGNGEEIGWLSDSSGIPCVPGERKTNAPEYLGTNFFLAAASAAAQGF
                     SQSQTTTVVDGSSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENFDAVYVPPG
                     HRVSIHIEKEIEIDYNAQGRKVKYGSKSTNSQLD"
     gene            18447..18845
                     /locus_tag="PXB09_001043"
     CDS             18447..18845
                     /locus_tag="PXB09_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5233177.1"
                     /translation="MKHLFCIMISALLITGCTTSTEELLPTNGSTMRDIWDKGASNND
                     LHLYRSQQGRTLDPVDYIPNSEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            18845..>19920
                     /locus_tag="PXB09_001044"
     CDS             18845..>19920
                     /locus_tag="PXB09_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HDL5233178.1"
                     /translation="MMSFLSEVFSSFKPTKAGVISSEPNENTGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDINPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAQNSAFSEEWLRVQAKHFKDIGKPEGLFIDDRVTNTAWSGRIRSTKMVIYRYVDKS
                     NDSNENLIIEQLNNACSRINGALTTAGLQLQRLDGEQIRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLP"
BASE COUNT         5985 a         3819 c         4041 g         6075 t
ORIGIN      
        1 agtcagttgt ataattcgtt ctgctaatga ttgaaattct tggtcaaaat tttctttact
       61 ttcatccatt gtattcaaag catgtccaaa ttgacctgag tttttaattt gctcttttgt
      121 taaggaaaat acgggaactc gtagctcttg gctaatagca atcaacgaat taaagtcggc
      181 tatgtgagcc aaatcaaatg gctctaagtc agaattcgtt gatttaagag cagcataaat
      241 agctgtatca tcaatagcac aatcaatagt ttttaatacc ggcacaaaat tcgtaatgac
      301 ttcatttcta attcgctcaa tccatttttc aaatgatttg gccggttgcc cttttcttgg
      361 tcgataacgt tgctgaatag tacctaaaaa ttgtggctta tttttaattg cataagatga
      421 ttggttaaaa ccattaagtt ctttaaatgc ttttaactca ttatgccatt tgcgaatatt
      481 tttagcgagc gaaccaactg cttgccagca gaaaaaatca ggtgatgtag gtacaataaa
      541 gtaatcacta gacattagga taacttcatt taatccaccc acatttggac taagatcata
      601 gagtatgtaa tcaatattgt tttgttcagc tactttctta attaaagtcg gaagattgct
      661 gggtatattt cttgttgctg gaacaccggc agcaattttt aatgatacac taatttgcga
      721 atcaagctcg gaaacattaa ggtgaccagg taacaagaac agatttggat tcagggtttg
      781 agtgatttgg ccaacatttc cactaaggta gttatcaggg ctttgtccgt ttatcagtgc
      841 ttcaacaata ccttccatag tcaaatgatg tctattattg taaaaaagcg ctaaatcact
      901 atcttctttg cattgatcgt agccaagtac cagaccggtt aggttacatt gtgaatccaa
      961 atcgactaac aatacttgat agccttgatt tgctaaactc caaccaacat taaatgcagt
     1021 tgtagtttta gcaatacctc ctttatgatt aaaaatactg atagacttac tcataatacc
     1081 cataattcta tgaaataatt aacccaccga actcatttga gaatggtggg ttaatgcttt
     1141 gctttagcta ggctgcaaat ccagattttc tcatcagttt gcgatcaaag ttgtggcgaa
     1201 taggcttatc ggaacgacat tcaaatgatg taatatcatt tcctgtttta atatcctgaa
     1261 tctgaacact tgcttcaaaa ggtgatttag ggtctgcttc tatatgacct acaatataag
     1321 attttcctgc atttcttaat tcgagcgaga ttgttgtgaa ttgtgaacca cctgcaatct
     1381 ccgatgccgg atttttgaga gcttctttta caggattttt gaatgtggta ttaccgtgag
     1441 agtacacata gtttcccccc tctttggtaa cttttaacgt ttggttatct gtagttgtgc
     1501 aagaatacac tacattgtta tttgcaaaag cattcattga gaaaaatgct gataaagcta
     1561 caattgccat ttttttcata ggttagtttc cttttggtgc gttgataatg taatcggctt
     1621 cctggttacg tcttcgagca ttaacaccat tattatgccc ttgtaaattt cggattgagt
     1681 tagctaaagc cgtcatatca cctgattgtg cggagacggc agccgctttt tgaacacttt
     1741 ctagtttaga taatgaccca tagttgtatg ataccgacgt taatgctgct tgtgcttgag
     1801 gagtcaattt agcccaaacg tcggcaccaa cattacccct tgcaacattc ataaattgag
     1861 gcattcttcg tgctaaatca cgttcagcat cttcccggct tacataagtg cctttttgaa
     1921 cccgatgaac cataccatct gcagtagtat aggtgtcaga gccatatccg gcacggttag
     1981 catttacatc ccatttcccg tggcttaaat atccttcaaa ctgtttgata agagccgttg
     2041 cttgttcatt cgcattgccg ttcatttggg caatttgggt atagctccct acattcacgt
     2101 tactgacaat gtttgttggg gaggctttat atgctccata aaaatcactc atgcctgagc
     2161 cgtctgattt ggggatagca atatatctat cgccaacggc attttgtgca gaattagcaa
     2221 tgccactggt gttgagatta tttgctccgg cttgattgct taaattggca aagcgacggt
     2281 ttccatcacc catcgcatta tcatcaatag caagagcttg ttcgttcatc tgttgagtaa
     2341 ttgcagctaa tgctgtatta ccgttgattg aacgttgcag ttccatttcg agtttaactt
     2401 gctcaatttc tctgtcaagt aatttgaggt ttctttctgc ttcttctact aaggaagatt
     2461 ttataacatt tggctcacgc ataccggcta acattgctcg gcgaatcagt agcaattttt
     2521 ccatttcttt agaaatagct aattcttgcg ataaccttgc acccagcaag gctgcatccg
     2581 gcgaagcagc aatggcttct aatacgcctt ttgttacact gaccgttgat gtactcagtg
     2641 aattgagttg ttccggcgtt aaactatcta agtgattcag tgccgcttct agctttgtgg
     2701 ctttttcaat agttgtttgt tcaataaaat gggcgattcc tttcccggct ttagctccac
     2761 ttgaactttg ttcacaagtt tcacaggcat caaggaatgt ttcaccaatc acttcacttg
     2821 cataggcagc agcctcgctt ggatttttcc attccgtaca aagcatacca tcacagcttg
     2881 caataggtat atctcctttt tctaatggtc ctcgtcctaa agcgaggtta tatccggctc
     2941 caacaatgtc agcaacgata gccattggtt tttgattttt accaccacgt tgttcgccac
     3001 ctacccaagg gatgcctttt tcagcatctt ttttatccat tttcttcttg gctgccattg
     3061 catcaggctc tgtttcagca atttcagcgg ctcggtgtaa tccggccatc tttgctaatt
     3121 tactgtccat tgctaaatca gcaagttggt tagacatggc ttcgcaactg gttttgaagt
     3181 tgttgaagtc aagttttcct tgatatagac cattagaaag aatgtcatac agttgaggat
     3241 ttgctcgttg gataatcatc gccgggaggc tggcaactgc accggttgct gactcaataa
     3301 tattgccata aagatcttta aaaccttcag taataccatt aagctggttt ttaatggaaa
     3361 gtttaatatc aaagttgcca caagttaaat tcgatttcca gccaatgcca atcccatatt
     3421 gatttggtct gccacgggaa gctggtgcgg aaatggcact acctcctcca atggagtagt
     3481 gcatataatc agaaaggaca gggtagtatt ccgtgagagc gttattacca gaaacgccta
     3541 gattaccagt cctatagcct gttgtatttt caataaaatt actaatgcta ttgccaacat
     3601 taacggtatt actatttgcg tatccgctca tggttgtgag cattatacaa gcggttagaa
     3661 atttgagact ttttgctttt ttcatttatt tatcctaata gtgctgataa tttaatgagt
     3721 atgtgtactt ttccagtcca catgacctaa aaaaacttgc ccttgttttt tacagcaaga
     3781 atagggcctc cataatgccc agctgtaatt ctcagtattg gagaaactat ctgaatgggt
     3841 agcccaatca ccactgtgcg gaaagacttt agggtaggat tcggaagtaa ataccttaac
     3901 tgttacatct gagggtttat tagcaggact agcacttgcc atagctgaaa gcagtagtag
     3961 tggtaaatag taaaatgtct tagcttgcat aaatgctcca caaatagagt aattcacgtt
     4021 taccttaaaa gatgatttgg ttagaagaaa tcggaaattg ttttttggtt ttggagagtt
     4081 tttgttagta tataagttaa tgtaacaagg gagagtggat gtatgagcaa tagaatacct
     4141 aaagcctgtt atgcttaccc aaaatcgccg aacaacccgt ttaatagatt gtcggttatc
     4201 aatctatacc agccgaaatg tctcccagca ttctgaaagg gaactctgta aaattacagg
     4261 aatgccacct aaacaataaa tggataatgc cagccacttt atccgttgta ttttgtcaca
     4321 tgcgtgattg caatgtcata atattacccg acttggggat attatgacat tgcaatcatt
     4381 gctcactttt cttagcctga gcccacaggt gaataaaggg tgccgtttgt gtcctcgatg
     4441 atgccacaga tatgccgatt aaagaccaca aggtaatcgg gtaaattacg aacgaaaata
     4501 tcaacattgt cacgaaggtg ctgctatttt caatatagta acttatattg gtctaactta
     4561 aatttcattt attcttcaaa agtacaacac cgttggtaag tgatttatca acggtgttgt
     4621 catttccaat tctctaaaat caaaattcaa ttctcaatta actttatgat tcaatatggc
     4681 taaattatcc tcaatttaag acgctgtata taacagcact taataagtcg cataactcct
     4741 gagaagcgac ggctatcctt agaggtagtt gagttattgc caaaatgtct cccagcattc
     4801 tgaaagggaa ctctgtaaat ttgcaggaat gccaactcaa tccctatcat ttcagtgaat
     4861 attcattgag attccatttt acttccacct tgcggggaac atttttcccg tgttgggtaa
     4921 ggatgtttct ccgctttttt acatttggag aaacaaacta tgacaactca aacttctact
     4981 caaaaaaatt acttcaatct acatactacc ggcattggct atttaaacga tattcgttta
     5041 gtagagcata aaaaaggaaa tcctttttat gcttgtcgtg ttgcagctct tgttggcgaa
     5101 tctgactcac cagagtacag atattttgat atgaatgtag tcggtaaaga aaccgaaaca
     5161 ctcatcaaaa aatgccaaaa agcggtctct gaagagaaaa aagtgcttgt atcatttgta
     5221 atggctgatt tgtggttcga tactttcact tattcaagtg acagtaaata tcacaaaaaa
     5281 ggcgatactg gagtgtctct taaaggtcgc ttaatccgca tcaaaatgat taaaattgat
     5341 ggggaaatcg tctatcaaga aaaaccaaaa gcagatgagc aatctgagta attttaccca
     5401 agcccgacaa tttatgttgg gctttacttt atgtcccgta gggaaacact ccctgcggtg
     5461 tgttttcctt tattttacaa ttttaggaga aacacgatga actcacttca acaatttgtc
     5521 aaaacattat caccaacagt ccttaatggt cgccattttg atggtattgt tggcgatgtt
     5581 gtctttgttc agaacggcta tggtaaatgg cttgatcaag gctttactat tattggtttt
     5641 gacaaaagca tagaggaaaa ggattggatt tacctagatt gggattgcta ttggttcgga
     5701 aaaaatccgg cacaggtaat ccctgaaaaa tcttgggctc aacgttcttg gcttgctaga
     5761 gcgtattcaa tctctcttga acgttttaat tcgttaggct tagagcgtga atataacatt
     5821 gtgtctgatt gggataaccc catttatggt acagatattc agttaattga acattccaag
     5881 gagtttttcc gttggactga agccgatgat agagggattt tcttagttca caacgagatg
     5941 gcttttcatt tcttcaaaaa agaaattaaa gcctcatcgg aaccggaata ctatcaacct
     6001 attgagacat tctggaaaga tgctacggtg gtattgaaca tagaagatct agatatgtta
     6061 gagcgagtag gattagagca aactaataca cctgctttag caaaattaac tacgtttgta
     6121 caggctgctc gcaacgaaat ttccaatggt aatatcgtat tctatcgagc attttaacat
     6181 ctaatacaaa gaggattatt atatgaatcg acaaggtatt tatatcaacg gtaaacaagt
     6241 ctttgactct aaaggcaaag agatcaacag cgttcaaatc attaatagta cagtgcaaac
     6301 agttgttggg ataaataaag gttatatctc aatggctgcc ggcaataatg tattaattgt
     6361 tgatggacaa acaattgcat tagaaccctc tccgactatc aacattgaag tatttggcaa
     6421 tgtaaccaac ctcaatgcag gttcagaaaa tgttcgtgta acaggcgatg ccaaatctgt
     6481 ttcaactgtc agtggtgatg tcacagtgga tggtaatgta acctcgaatg tgaaaactgt
     6541 gagtgctgac attcattgta aatctatttt aggtaaaatt aacacagtga gcggtgatat
     6601 ttatcgctaa tattgactat acaccctatc gggaaacatt ctcggtaggt atgtttcccc
     6661 actttttatt taaaacttgg agaaacataa tggaagattc cttttttgac tttgatgata
     6721 tctcttgcta tttaggacaa tgggaagcca tcttagaaga atatagcgat attgtcagta
     6781 ttgaagactt ttggcttgtt gccaaagaat ttgaaactgt accacatttc ggtaatctgt
     6841 atcaggagct tgtcatctct cgcttaattc aacgattctg tactgaatta gatattgagc
     6901 aagattcaga tttagttgaa tttgactact atatcaatgc aatagacacg catttttaca
     6961 ttaatcgcca aagaatctgt gatatagatg attggaatga aatgttagac aagattcgta
     7021 aagaaatgac gccggctaaa ttagctgcct aattttttgc aaatttttac taaaaacgac
     7081 tcttgccgca gtcttagtcc acccacttgg ggaaatactc ccctaatggg tgacatttcc
     7141 ccgtatttta tttaggagaa atgtatgacg tttgaacttg gtcgagtatg tacaactcgt
     7201 gctgttgctg aatgtttcaa tcaaaatgcc ttggttgaat tgcttaatcg ttactgttat
     7261 ggtgattggg gcaatttgtg tgaggaagat aaattagcga atcaggaagc aatgaaatac
     7321 ggagggagaa ttgtagctcg ctacgatgta gatgatgaaa gtctttatat catcacagaa
     7381 gctgatcgta gctgtacaac aatcttattt tcttatgaat actaaggaga aatccgatta
     7441 acacagcaca ttattgtgtt ttcaaacgcc gtctaatgat ggcgtttttt tattctctca
     7501 atcaacaaca gaataaatca ttcaaaatca gcaatgactt cgccatagtt ggtctagatt
     7561 cctttcatac ttggagagat taaatgaaaa caaaaatatc cttaatgact gtttttatgc
     7621 ttggcttaag tggttgtgtt catcaacagg atacagctca aaatagtgat gaaatcacac
     7681 ctatgcctga ttcattgcta acacctcaaa tgcaacaatt acctccacaa gaccgtatcg
     7741 tgtccaaaga tatttaccaa gaacagacta cctcgaatac cgaagtggta cgtgacggac
     7801 gctacacctt aatcagtatt gctccggagg aaggtcaaaa atatctgctt gaacaagtcg
     7861 tatcagtcaa agtctccaat cctaaaaatc gttttactgc gaatgtccag caaggtttgc
     7921 gttctacatt aactaatacg ggtttagatt tgtgttatcc acctatcgga gaacaaggta
     7981 atgcggttca aacacttttt acccgacctc ttccaaaagt tcattaccaa ttcggtccga
     8041 tgaaattata tgaagctcta caaatgattg caggtcccgc ttatgaacta actcttaatg
     8101 atatatcccg tacgatttgc tttaaagctc gggaaagttc attccaaaac cctcataaac
     8161 ctgctgttgc cgttacaacg acaacaatta aaaccgaggt cattgaggaa taatgaggga
     8221 aatatcaatg aagtttaatt tatgccgtaa agctataccg ttggcagtac tacctctttt
     8281 attgtccttt gcattaccta ctctggctca aaatatgcaa acagagaccg taagtagctc
     8341 acaatcgact ttgcagaaac aaagccaaca tcaacaatca caattaagtg atagcctaaa
     8401 acaggctaaa gaatggggat tgaccgttga agaatggagt cgttataccg aattaatgaa
     8461 aggtgagcga ggtatgtggt cgccaaatct agatccgtta actgctttag gtatcgaagc
     8521 acgaactgct gaggaaaggg aaaaatatgc tcgtatgttg gcgaaaaaat attatgaacg
     8581 agtgtcaaaa gaacttgatt ttgacaaagt ttatcgtcag gagtttgaga aactttatcc
     8641 gaatgagcta ccttttgagg ttgaaccaca tatttctcaa tcggtaggtc gtgtggttta
     8701 ttttacccgt tttgataact gcgattcttg taaaagtgat cttgggaaaa tcctctctta
     8761 cgcaaataat caaacacctc tcgatattta tattgttggg caaaacatct ccgataatga
     8821 tattcgtaaa tgggctgccg acaataatat tgacccaata aaagtcagta aaagattgat
     8881 tacccttaac cacgataaag gctattggct gagatattcg ttaggaaaaa tgcccgctgc
     8941 ttaccaaatc aaacaggatg gtgaatggac atcactcgtg tattagtcat tgttgcagtc
     9001 tttctttcca acattagcat ttctcaggca aagcccttca atggatttgg ttctgaaatt
     9061 gacagctata ttcgtatggc tgctcaacgt tatcaggtga gtgaagcaat gctacgaggt
     9121 tttgtcaaaa tggaagatgg ctggtatggc aacatttcac caacaggagc aaccggtgtt
     9181 gggcagttta ctatgggaac ctggaactgg ctatctgaaa cagagagggg aaagcaactt
     9241 ggtatgaagt tgattacagc caaaaatcgg ggttcttacg ccgatccccg tcgagataaa
     9301 tatacgaata ccttagcaac ggcattattg gcacgttggc atattgagca atttcaactc
     9361 cgtaatatcc ctattactga tgagaattta tatatggctc ataatatcgg cttagatggg
     9421 ctgcatcgag caatgatggg gaaagctact aaagaagaca ttttaaatat gcgtcgtaat
     9481 ggaatgaaaa gttggatgac ggtaagagac tttctcaatt accaaaaagg acgtttttta
     9541 gcacataagc aagaagccaa ttttatgact gtctccaagc aagggcatat tcataccgga
     9601 gttgcagctt tcgtttatcc cacaagccaa atgggaaaat cggtcaaatg ggttgagccg
     9661 gataataaaa tgatttgggt tgaacctaaa aatgcaatgg tttgggtaga accccaaaat
     9721 actcttcaga ggtaaaaatg caaaacaagg taaaagtatt attgtttagt ttatatgtgt
     9781 cccatttctc ttgggctgat ttaaccgtga ttgctgattt cggtggtgaa agtgcggtac
     9841 gtttttatga atctttgcaa ccggaacacg atgaaaatgc accaaactat ccgaattcca
     9901 tttcagcctc agtgagtgag gctgatattt tacccattgt ttcccataaa ctatctcccg
     9961 ggactattaa agaaaaacca tttgatttaa ccggaatgca agccattttc ttaattggag
    10021 cagataatac ctcagctcag tggttacaac aaaatcgaga gaagttgatc acgttgaatg
    10081 caacagggct tgtagtgaat gtacaaacac tctccgaact taatcaatta cgagacattg
    10141 taccggaact gagaatatta ccaactcccg gagatgacct tgcagagcga attggtattg
    10201 cacattaccc tgtcttaatc actgaaagcg gagtttcaca ataatgtctg ctaaacatac
    10261 cttagaggcg tggttacgac ctcctgttga attttttccg gcagcggttc acgcttcttg
    10321 tgcctttgtc agtgctgcag ctccttggtc tttggcactc catccaagta tcggttacag
    10381 tattgcagct ggttttggag cattgagctt ttatcgggca aaacaaggtt ggcaaattgt
    10441 gcgttaccat cgcaacctga aacgtttgcc taattattca atgacaagca agcaaattcc
    10501 ggtcagtaat aagtatctgt ttgtcggtaa gggatttgaa tggaaaccta ttcacactca
    10561 acggttacac gattgttttt cggataacgg ttcaaaatat ctggagcctt ctaagctatt
    10621 taaaatggct cgtgagtatg aaaaacgaca cgaaaattgg ctaacacatc ttacctcaaa
    10681 ggatagccgg tggaatctgg ttagacctct gccacctgtt gagggtattc ctgctatcca
    10741 tggaattgag ccggatgagg ttgatgtcgt tcaatccgtt agctctcggg ttgggcatac
    10801 ggtagtattc ggtacaacac gtgtcggtaa aactcgttta gctgaggtct ttgttaccca
    10861 ggatatccac cgaggtaaaa ctgctgatga gcgtgaagtg gtagtcttct ttgatccgaa
    10921 aggcgatgcc gatatgctca aacgaatgta tgcggaggca aaacgagcgg ggcgagaaga
    10981 tgagttttat gttttccatc taggttatcc cgaaatttct gcccgttata acccagtagg
    11041 acgctttaat cgtatttcgg aagtcgctgg gcgtatttca ggacagctaa gtggagcggg
    11101 taactcggcg gcatttaaag agttcgcttg gcgatttgtc aatatcgtcg cacgtgcatt
    11161 agttgaattg ggaaatcgcc caaactatgt tcaaatttcc cagtttgtac aaaatattga
    11221 ttcattattc cttgattatg cggaaaaatt cattcgtaaa accgatccaa aaatttggga
    11281 aaatttagca accatcgccg ctggactgga tgaaaaagca cttcctttcg gaatgaaaga
    11341 ccgtccgctg atttttgtga tcaacaagta cattgctgaa agtgcagtct ttgacccaat
    11401 tctacaagga cttgccagtg ctgtacgcta tgaccgtacc tatttcgata aaattgttgc
    11461 ctcattgttg ccgttattgg aaaaattaac gacagggaaa atttctgagc tgttatcccc
    11521 ggattatgct gatattttgg atgaacgtcc gatttttgac tgggaatcca ttattcgtaa
    11581 acgaggaatc gtttatattg gtttagatgc tctctctgat gcgacagttg cggccgctgt
    11641 aggaaacagt atgtttgctg acttagtctc aatggcaggt catttatata aatttgggac
    11701 aaatgacgga ttaccgggag cattcaaaga aaaatccaaa ccagtgaaaa ttaatcttca
    11761 ttgtgatgaa tttaatgaat tgatgggtga tgaatttatc cctctcatca acaaaggcgg
    11821 tggtgctgga atacaagtaa ctgcttatac acaaacactc tccgacattg aagctcgtat
    11881 cggcagtaaa ccgaaagcgg gacaaacctt aggtaacttc aatacactct atatgctgag
    11941 ggtaaaagaa ccggctacgg cagaattact cacaaaacag ttacacgaag tgacgattaa
    12001 acgtagcacg gtcacgtcca gtacaactga ctccagtaat cctgacgatg ataaggcgtt
    12061 tagctccaat accggacagc gtatcagcga aagtaccgtt cctatgttgg ttccggccaa
    12121 cattaccaat ttaccaaaag gacaagcatt cgctttaatg gacggtagta aattatggaa
    12181 aattcgaatg ccgttacctg ctgtcgataa agatgatatg atgcatcaat ctttacgaga
    12241 gctgacagat tatatgcgta aaaactatca cgttgttgaa aattggtggc aaccggcatt
    12301 tacagaatat acgccgtccc gagacattgc agaagcattt gaagcgatgt cggagcctca
    12361 atataaaaca cagatagacc atcaagtaga taatttcggc atagatgaac cttacgatat
    12421 tgatgaagag gaaaatgatg agtagtgcca aaatgagaga ggaaaaaaga accaatctat
    12481 tagatttacc aaataaatac cgtaatttta atggggagtt ttcagcttcc tgtggcttag
    12541 ataatgcaga agaactcctg attcatagtc aatcctattt tattgaatgg tttgaacaag
    12601 gttattcctt ccatcagttt gccgaaaaat tcgcagatca agggctttcg ttatggtctg
    12661 ccgatgaagt atctatgcgt cactcggata aatccaaaga tattttcgct ttttatcttg
    12721 cttttgataa taatccttcc ggctatatcc ttgtccagtg ccagctcgat agagaggata
    12781 gtttgcaatg agtgaagaaa ctaaagctcg ccgaaaatca ggtttaatca acctgatttt
    12841 tggaaaaata aatatgtcgc ttgctgcaat tgcagtatct ctcatattca gcattatttt
    12901 agagtggata ggcattgctt tctggtggcc gcaagaaggg catttgcata gccaaacgat
    12961 gatgctcaat gagatgcaat ggctatcgga tgacttttct caaagcctgt ttgccaagtc
    13021 ttctactgct tttgcaacat caattattga aaacgtgtat aactggttat tcgtttatac
    13081 gggtgttaag gagtggttaa cttcaccggg taatggtagt atggaacagt gggtacatca
    13141 ctacggcaga gcctatattg aatctgttat ttatgtggtg atcaccttta ttattcgcct
    13201 cattattatt gtttttacca gcccactctt tttattgact gcactttccg gtttaaccga
    13261 aggactgtca ttacgagata tacgaaaatt tggtgccggg cgggaatcag cctacctata
    13321 ccatcacgct agacgttata ttatgccaat gatggtcaca gcttgggtgc tttatttatc
    13381 tatcccgttt tcaattcatc cgaacatcat tttagtccca gcagcctgtt tgtttggttt
    13441 atccatctgt ataactgcgg cgagtttcaa gaaattcttg taaatttcat aagcccttag
    13501 caatatgcgg gggcttattc ttctgttgtt gcctctgtat cttcattttc tgactcagta
    13561 tcccaatcag aatcctccca gtcttcgact tcccaatatt gtggatattc atcatcttca
    13621 atgatttgtt cagaaatttg ttcagaggta ttccaaatag gaaattcccc gtactcatcc
    13681 aattgtaact ctatcttttt tcgctcatca tcgcctagaa attgccaata attacagatt
    13741 aactttcctc ttaaacttaa ttcccaaaga cctccgtaat tatattgagc attttctgca
    13801 tggcaaatat tccccacttt ctgtgctgaa ggaagagaat gggcaacata tgggaaaact
    13861 acaaggaaca gtgctagata tctcatctgg tatctcatcg taaagcgtga agatttcggt
    13921 gttgatacta cttaattgac tagcttaaac atagaataat atctttctca ccatttacta
    13981 ttttgtgcaa tttctcttct gaacggtaac agagttttcc attaaatttt aggatcgctt
    14041 ttggcactct taacctgaag taaaactaaa aatagaggtg cactatgtct atttcaacat
    14101 ctttaaggaa aggtattgtt gtccttgtta ccttatcttg cttgccagca cttgcttcaa
    14161 cagaacaaga gcaattagcc caggcaatta agcaactgga agcggcaaaa ttatcacttc
    14221 aacgagcaga aaaagtagct aaagcctcgc ctaaaacacg agaatacttt aactattctg
    14281 ctattcacag tgatattgaa accgtcaaaa aaggaattca acaatatatc aatccaagcc
    14341 gagcattacc tcgtgatccg aatgtactac gtacattaag tgatgattat agcaaattac
    14401 gggggcagtg atgtcttact cccctgcgaa tgcgttttct gttgccagcg gtatcgaccc
    14461 ttttagattg aaaatcatga tcgccattat ttttctttca ttactgctct tagccgtcgc
    14521 ttgggcattg aatagtggtt ataagggatt ttcatttaga gataaaagtc ctttttcact
    14581 tttagtttta tttctcaaag gagtggcact gttagcttgt gttacttatt tctttatcta
    14641 ttagattcga ggtctattat gaaccgcatt aaatctctta cgaaacatct gcatagtcgt
    14701 tatttggctg taatgctctt cttctggggt tccctccaaa atgcatttgc agccggtcct
    14761 gatgcttcca aaatcccaga cttccaaatt ccaggcgtgg atagtaatac caaagatcca
    14821 atggaaatta tttggattgt tctgaaaggt cttgtcactc tcggagctgt tattttagca
    14881 gccgtagcca ttttgacagt tgttaaagca ttgattggca tctataacga agctacatct
    14941 gaaaatggta aaaaaggttg gggacacttt attctcgcct taattatcgg ctttattgtg
    15001 attttcttct gcttgtggtt agtcaaactt gcagtcggac tcttctaatt aaaatgtcta
    15061 ggagaccaat atgtcagaac aagatacaac cattcctttt cttcccaccc gccttaatcg
    15121 tgaagctacc gtttacggtg ggatgacagt tagtgagttc ggcatatctg ccggattagg
    15181 atttatgtta ggtctgattg ttggtctctt cttgtggata ttaactgatt tttggcttct
    15241 tattccggca atggcaatgt tgctctgcat cgcaactgtc ttaatcggaa aaggtattgt
    15301 cgctgcggtt aaacgaggaa aaccagaggc ttatttaaat agattagttg aaaagaaaat
    15361 ggatgacctc tttaacggtc ataagtttat aaaacgagaa gggttttggt ctattcgccg
    15421 atatagaagg aaataacaaa tgagccagtt aaaaagccaa ttacacgaaa aagataaaca
    15481 tatcaaaacg actcgaattt ttgccttcct gtttttcatt attattttgg tactggcagg
    15541 cgtaatctat actttcccaa gtcgccttac gatatacaac ccaccagatc tgcgtgctgg
    15601 gagccaacga gcttggtggg aaattcctaa accaacaatt tatgcattct cctatcaaat
    15661 tttccagcaa atgaatcggt ggatgacaaa tggcgaagag gattatgaga aaaatatcac
    15721 caccctcaaa ccatttttaa caccacactg tgaagcattt ttacgacaag attataaaga
    15781 tcgtctgcgt aacaatgaac tacgcagccg aacccgtatg gtgtatgaaa ttaccggtag
    15841 aggatatagt gaagataaag ttaccatatt cagtgaagat agttgggctg tcaatcttga
    15901 tttaagtgtg gatgaacatt tccaaggaca gccggtaaaa cgagtttata ttcgttttcc
    15961 tatcagtatt gtgagaatgg atgtcgattc tgctcaaaac ccttggggat tagggtttaa
    16021 ttgctatcac tccattccaa aactcttaga aggtgttgag ccaaaaacag aggagaaaaa
    16081 ataatgaaac gtctaccaat tttgctcgtc tctttgctta taggcttctc tgggagtagc
    16141 ttggctgatg tattgatgaa atgggaaaga aaaccacttc ctgttgcgtt acaagtggaa
    16201 aaagaacgaa ttatttttgt cgataaaaat gtcaaggttg gttatccggc agaactggac
    16261 ggtaagctac gaattcaatc taccggtgga gccgtctatt taaaagcatt agaaacattt
    16321 ccctccactc gcatagaatt ccgtgatgtt acaaccggtg aaatttttct atttgattta
    16381 acagcagctt cgaaagtcgc taatcctgaa gaggcaattc gagtggtttt tgacggtacg
    16441 gtagaaaaac aatctttttc aagcaataga gatgatgaaa gctctgatct gcctattgcg
    16501 aatagccgtc ctcagcttcc agtacctgcc gcattgaccc gttatgcagc acaatcactt
    16561 tatgctccac tacgtacagt tgaaccttta gatggtgtgc gtcgtgtggc acatcgtcta
    16621 cctaaaaaaa ttaccaagct gctaccggct tattcaatag aagcaacacc tttaattagc
    16681 tggcagttag acgaatatgt agttaccgct attcgtttgc aaaataaggg taacactcaa
    16741 attacgcttg accctcgaga gcttcaagga caattttatg cagcgacttt ccagcataat
    16801 tggcttgggg ggtacggaga aaatgaagat accacaaccc tgtatttagt gaccgaaggc
    16861 tatgctaata acgcattaat tccggaaacc cgtccagtca aactagtcag taaaaaagtg
    16921 aaaagaacaa caaaagttga aactaaaccg gctcaatcgg cgaagtagga ggaaaggcaa
    16981 tgaaagcgaa taaagcctta tttgtcatac tgggcattgt atttatctta gtcggtggaa
    17041 ttgtctatgc cttatttgga cgtagtgagt cagttccaca accgacacaa caggaaattt
    17101 tagatatttc cattaaagat ttaacacctg aacaagtcag aacaatgggt attcaaggtg
    17161 atacgccgat tgatacgctg cgtacccttg tgacaaccgt taaatccaat gagcgtcgta
    17221 tggatgagtt aattgatgaa aatcgccaac tcaaacagaa agaagattta gtgaatggtc
    17281 gtatcaatga tgcggtaaat aatgaaaccc gaaaactgca agagcagatt gcagatttga
    17341 aaatgcaatt atttgatatg gcgactctcg ttaataacaa accaacaaca caagagtcta
    17401 cccctcaggt agaggctcag cctaatacgg taccgaataa aggatttgga acagcaggag
    17461 ataaattacc tatcggtggt gcaactatgt ccaacgtgga taccagtgga atgtattggg
    17521 tagaaccaag cgatcagatt agtttggatg caagtggaaa acctgtgtca ggcaatacag
    17581 tagcaactaa atttggcttt ccgaaagatt ttaatggagg acaatctgca ggaaataacg
    17641 aaaagaaagg tctgccgttt ttcccggaaa cagatactgt gacaagctca caaggaacgg
    17701 ctggaaacgc acgtggtaaa aaccagatga catcagtata taccatacca agtaattcaa
    17761 cattccttga ttcagttgca atgacgggac tcatcggacg tatcccgatt gataatcgag
    17821 tatcggatgc ttatccgttc aaagtactta ttggtcgaga aaatctcatt gctaatggta
    17881 ttgaattacc tgatgtagac ggagcaattg tatcaggtac tgctactggc gactggacac
    17941 tatcctgtgt tagaggcagt gtaaaaagta tgacttttgt gttcaatgat ggacgtattg
    18001 tgagtacctc taataaaggg aatggcgaag agattggctg gttatcagat agttcgggta
    18061 tcccttgtgt tccaggagag cggaaaacca atgccccaga atatttggga acgaatttct
    18121 ttttggctgc tgcaagtgct gctgcccaag gattctcaca gtcacaaaca accactgttg
    18181 ttgatggaag tagtgttgtt ggagctgtta ccggcgatca gggtaagttc atcttaggac
    18241 aagctatcgg aggcggctta aaagaatctg ctgactggtt tagaaaacgt tttgctgaaa
    18301 actttgatgc tgtatatgtg ccaccgggtc atcgtgtctc tattcatatc gagaaagaga
    18361 ttgaaatcga ttacaacgcc caaggtcgta aagtgaaata tggctcaaaa tcaacgaatt
    18421 cacaactgga ttagaaggaa caaacgatga aacatttatt ttgcataatg ataagtgcct
    18481 tattgataac aggttgcaca acatcaacag aagaattatt acctactaac ggcagtacga
    18541 tgcgggatat ttgggataaa ggagcgagta ataacgatct acacttatac cgttcacaac
    18601 aagggcgaac acttgaccct gtcgattata ttcctaatag tgagcaacga gcctataccc
    18661 gtacggcaga aaatgaaatt aataacttgt tccctcgttt acctaatccg gatctgatta
    18721 tgtatgtgta cccacatcaa actcgttccg gagagcctct cagtattcca ggatattcta
    18781 cagtactacc tttctatgga cgagttcaat atgctcagcc gggtgataga acaagagggc
    18841 tttaatcatg tcttttttaa gtgaggtatt ttcctctttc aaaccgacta aagcaggggt
    18901 tatatcaagt gaaccaaatg aaaataccgg tgagtctgac atcattcaaa ataaaatgag
    18961 tgaggtaaat aacgaggttc aacaattaaa acgcagtgga aaactcaccc agtcacagca
    19021 tcaccgtcgg ttatactcac aagagccctc ctttatcgat catctacctt ggggagaata
    19081 tttgaatgag cacggtgtga tactccttga tgatgcccgt agtgttgggg cagtatttga
    19141 tattaagccg attggtactg ctggccgtag tattgaattt ttaagtcgga tacgtaatct
    19201 tgtcaaagat gccttacaag atagctttga tgagctggat ataaatcctt acgtcgtgca
    19261 attttattgc caagatagcg atgatttaca gccttatatt gaacagctac ggaattatat
    19321 ctcgcctatt gcccaaaata gtgcatttag cgaagaatgg ttacgagtac aagccaagca
    19381 tttcaaggat attggtaaac cagaagggct ttttattgat gacagagtga caaatacagc
    19441 ttggtctgga cgtattcgga gtaccaaaat ggtgatttat cgatatgtag ataagtccaa
    19501 tgattccaat gaaaatctta ttattgagca gcttaataat gcttgttccc gaatcaatgg
    19561 ggctctaaca acggctggat tacagttaca gcggctagat ggtgaacaaa ttcgccaatg
    19621 gttattgcgt tggtttaatc ctaatccatc tattaatttt gagggattaa gcaacaatga
    19681 ttgttaccat ctttttggca aacaaacctc aaatgacggg cttccagaat tagcgtttaa
    19741 cgatttcagt gaagatttat tttattctca accgaaaaat gaaggcaact attggtattt
    19801 tgatgaccaa ccgcacgaag ttgttgtagt caataattta agaaaacaac cagaagtggg
    19861 cttaatgacc ggcgagatta ctcgtgggcg taatattaat gcgttatttg acctattgcc
//
LOCUS       DANLTI010000038        19846 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.038, whole genome shotgun sequence.
ACCESSION   DANLTI010000038 DANLTI010000000
VERSION     DANLTI010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19846
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.038"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..361)
                     /locus_tag="PXB09_001045"
     CDS             complement(<1..361)
                     /locus_tag="PXB09_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5233179.1"
                     /translation="MSIKKVTLASLILLGLTACSSGGSGSSSNNVAKPNTKPQTTQQQ
                     TDKAAAEKAAKDKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEK
                     AAKEKAEAERLAAEKAAK"
     gene            564..2018
                     /locus_tag="PXB09_001046"
     CDS             564..2018
                     /locus_tag="PXB09_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-histidine dipeptidase"
                     /protein_id="HDL5233180.1"
                     /translation="MSEISTLAPQLLWQWFDKACAIPHPSYHENELAEFIVNWAKSKN
                     FFVERDEVGNVLIRKPATKGMENRQTVALQAHLDMVPQANTGTVHDFTKDPIQPYIDG
                     EWVKAKGTTLGADNGIGLASCLAVLDSDDLAHPTIEVLLTMTEEAGMEGAIGLRPNWL
                     TADIMINTDTEENGEIYIGCAGGENVNVTLPIFLVPHQQDSAVTVTLKGLNGGHSGCD
                     IHTTRANAIKVFARILEQAHNEVEFQIAEIQGGSVRNAIPREAHATLVFSAKNQQKLT
                     ACLSQTAEQVKAELKIAEPNFQFLIEEAQLPEQAFDLASTARVIHFLNVMPNGVVRNS
                     DVVENVVETSLSIGVLNTEASEVKATILARSLIEGGKEEIRSKIRSLTALVGAEVEFS
                     GNYPGWEPNPNSKITPLTKAIYDEILGYESQIKVIHAGLECGLINKIYPNMDFVSIGP
                     TILNAHSPDEKVHIPAVEIYWKLLTKLLEQAPEK"
     gene            complement(2093..3382)
                     /locus_tag="PXB09_001047"
     CDS             complement(2093..3382)
                     /locus_tag="PXB09_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233181.1"
                     /translation="MDIRQKIAHNKMTSFQWLVVGLTVLLNMLDGFDLMALAFTAKSI
                     REELQLDGAAIGSLMSAGLFGMAIGSLFLSPLADKFGRRPLLLIGTGLATLGMLLTYF
                     ATSAFEIGVWRVLTGLGVAAILTGTNVLVSEYSSQKWRGLAIAIYASGFGIGAMLGGM
                     SAVLLQGEYGWRAVFLVGSILTGAVFVLLFFVLPESVEFLISKHPVNAKARLNQIAVK
                     LGLGNGWELPEIEAKSKSKVAITRLFEPEYRRNTLLIWLAFIAISASFYFISSWTPAL
                     LEEAGMPKTQSQTVGMAISVGGTIGSLIFGFLVSRWAAKHILQAFSILAASAVVAFVF
                     AGNLGLAITLAILVGGLINGCITGLYTINPTLYAPDFRSTGVGTAIGVGRLGSIVSPT
                     LAGILLDAGWKKNELYLGAAVVLLIAAFTVHFLKQRK"
     gene            complement(3586..3921)
                     /locus_tag="PXB09_001048"
     CDS             complement(3586..3921)
                     /locus_tag="PXB09_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDL5233182.1"
                     /translation="MVSEQRQNPEEQKSEEQKINVEVLYAYPDKYFLKKLQVPQNATI
                     QTIILLSGVLEKYTEIDLRENKVGIFSRPAKLNETVEEGDRIEIYRPLIADPKEIRRK
                     RAAEQAEKK"
     gene            complement(3911..4345)
                     /locus_tag="PXB09_001049"
     CDS             complement(3911..4345)
                     /locus_tag="PXB09_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDL5233183.1"
                     /translation="MPIVNQSALVPYSAEQMYQLVNQYEKYPEFLSGCVSTKTLSTGE
                     NELKAELHIQKLGISQTFSTHNKMTPPYKIEMALIEGPFRHLHGAWTFTPFDEQSCKI
                     ALQLNFEFSSPIVAMVFGKVFNELTLKMVNAFKQRAKEVYGV"
     gene            complement(4400..5455)
                     /gene="modC"
                     /locus_tag="PXB09_001050"
     CDS             complement(4400..5455)
                     /gene="modC"
                     /locus_tag="PXB09_001050"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDL5233184.1"
                     /translation="MLKLKLLQQLGNLTLNVNLDLPNKGITAIFGRSGAGKSSLINLI
                     AGLSTAQAGFIELNGQVLFDSQNGINLPPEKRNIGYVFQEHRLFPHYSVEKNLKYGYK
                     RSDSADFLQIVELLGIAPLLNRYPASLSGGEKQRVAIGRALLSSPNILLMDEPLSALD
                     LPRKQELLDYLDKLSARLEIPILYVSHSLEEVVRLADHLVLLENGKVTAFDTLSAVWH
                     SSAFSAWQPNHQRISLLELPVEETLPHYNMLGLSLNAQRLWVNQLPRHQIGEKLRVTI
                     ASKEVSISLQKPTQSSIRNVLKGNVRKIETHLDRVDLAIQVENQQIWSTISLWSFNEL
                     AIQPEQEVYLQIKSVSL"
     gene            complement(5442..6134)
                     /gene="modB"
                     /locus_tag="PXB09_001051"
     CDS             complement(5442..6134)
                     /gene="modB"
                     /locus_tag="PXB09_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDL5233185.1"
                     /translation="MLNFTPQELNAIVLSLKVASIAVVLALPLAVWVAWLLARKQFWG
                     KNLLNGIMHLPLVLPPVVIGYLLLISMAKRGVIGQYLWEWFHFSLSFSWKGAVLASMV
                     MAFPLMVRSIRLAFEAVDPKLEQAARTLGAIPLKVFFTLTLPLSFSGIIAGGVLGFAR
                     SLGEFGATITFVSNIPNQTQTIPAALFTFIETPDGEMAAARLCLVAILISLIALFCSE
                     WLAERQKRYAQT"
     gene            complement(6318..7073)
                     /gene="modA"
                     /locus_tag="PXB09_001052"
     CDS             complement(6318..7073)
                     /gene="modA"
                     /locus_tag="PXB09_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5233186.1"
                     /translation="MKALKKLAITMALTLSGTAFSQEITVFAAASMTNVLQDIQQDFE
                     KAYPQDKITFSFASSSVLAKQIEQDAPADIFISADQKWMDYVAEKQPEKVKHRRNLVR
                     NELVLIAPTESNIEPKAIQAVDFAKELANSYLSVGDPNHVPAGKYAKKALSHYQLWES
                     VEPRLARAKNVRDALSFVERGESPLGIVYSTDAKVSNKVKVVAVFPPESYGEIVYPAA
                     AVSEKASAATFLDFLKTPKAKAKFEAAGFYPVN"
     gene            complement(7094..7855)
                     /locus_tag="PXB09_001053"
     CDS             complement(7094..7855)
                     /locus_tag="PXB09_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233187.1"
                     /translation="MNLIGFYTLAYKECRRILRIWRQTLVPPVITTTLYFLIFGTLIG
                     GRIGEMNGVGYTQFIAPGLIMMTAITASYVNTASSFFLSKFTRDFEEMLISPLSTHNI
                     IWGYVTGSILRAGLAATLVMCVAMVFVSFEIYSVAIIVLTLLLTIIAFALGGVINAVF
                     ARSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGLRYGFLGI
                     SDVPLGYTFAVLTSLCIGLYIIAYSLIQRGVGLRS"
     gene            complement(7857..8765)
                     /locus_tag="PXB09_001054"
     CDS             complement(7857..8765)
                     /locus_tag="PXB09_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233188.1"
                     /translation="MKALELIDLVKTYPTGVKAVKGINLVVEQGDFYALLGHNGAGKS
                     TTIGIISSLVNKTSGSVKVFGYDLDTQKVELKHQIGLVPQEFNFNQFEKVIDVLVQQA
                     GFYGIPRSEALVRAEKWLKLLDLWEKRTHLTRELSGGMKRRVMIARALMHNPKLLILD
                     EPTAGVDIELRRSLWDFLRDLNNQGTTIILTTHYLEEAETLCRHIGIIQHGELIENTS
                     MKALLAKLESEVFVLDLQNSEQNQPLVIQNYPHKWLDENTLEVNVKRQQGLTNLFSQI
                     SAQGAEVLSMRNKSNRLEELFINMAQ"
     gene            complement(8771..10828)
                     /gene="dnaX"
                     /locus_tag="PXB09_001055"
     CDS             complement(8771..10828)
                     /gene="dnaX"
                     /locus_tag="PXB09_001055"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDL5233189.1"
                     /translation="MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFS
                     GTRGVGKTSIARLFAKGLNCVNGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVE
                     DTRELLDNVQYKPTVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ
                     KLPITILSRCMQFHLRALEQSQIARHLEFILNAENIPFEPLALEKLAKAAQGSIRDSL
                     SLTDQAIAMSNANITLAIVSQMLGLIDDNQPLELVQATAQADGEKAMAIIEQIAAKGV
                     DWQQLLSDVAEVLHKIAMLQLVKTPTTEETLVHFLAKQIPPEDVQFFYQLILNSKKEL
                     PFAPEQRAGVEMAILRALAFHPKQAEKIATVAVEKVTQPNHSVSAVTTAKPQNQISQL
                     RENFEQNQQKTVTVANTTTAVESIAQPPQAVDTAISPSAPATLSPAMAALEARKKLQA
                     QQANLAQTEKKKPELKAPQVIAKKSANQTASLQERFISLAENQHKAVLQVSKKTESAP
                     KSVEDEDYRWTWLNPELENQADSAKPSDIKQAILQERTPELVAKTIHLSCQQDKWCDI
                     ANSLNLGGFSRQIALNSYLAEQNEQHLALVLKPNMAHLDNPESRKNLEAALAEKGYSY
                     ELTIGDNSEQQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRNAFDAQIDESTIRAVA
                     ETE"
     gene            complement(10919..11458)
                     /gene="apt"
                     /locus_tag="PXB09_001056"
     CDS             complement(10919..11458)
                     /gene="apt"
                     /locus_tag="PXB09_001056"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDL5233190.1"
                     /translation="MNQLDLIKSSIKSIPDYPKAGIIFRDITSLLEVPTAFQATIDAI
                     VAEFKDKGITKIVGTESRGFIFGAPVALALGVPFVLVRKPKKLPREVISQSYTLEYGE
                     DTLEIHKDAVSANDNVLVIDDLLATGGTIDATAKLIRRLGGNVEHAAFVIWLPELGGK
                     ERLEKEGVKSFSLVSFEGH"
     gene            complement(11586..12536)
                     /gene="lpxM"
                     /locus_tag="PXB09_001057"
                     /gene_synonym="msbB"
     CDS             complement(11586..12536)
                     /gene="lpxM"
                     /locus_tag="PXB09_001057"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249087.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDL5233191.1"
                     /translation="MTRITAQDGYTHKFLWSFLHPKYWGVWLGVLGLVILAYVPVRIR
                     DKLSAFVGKMAYRYLKQKNKKGYHRAKVNLRYCFPDWSEKKREEVVEKMFITVAQTML
                     AIGETAIRPASYLQKRCEFTGFENVVKAKESGKNVIMLVPHTWSIDMAGVAMFSLGYP
                     MTSMYNPHRNALVDWLWNITRERLGGRMHTRQNGIKAFLADVRKGDVGYFLPDEDFGE
                     ELSVYADFFATEKATLPGLNKMARVANAEVIPMFSIYNAEKAKYEMEILPPLEFSGDP
                     IQSAREMNRVIEYFVEKNPEQYVWILRLLKTRRNREDIYL"
     gene            complement(12977..13660)
                     /locus_tag="PXB09_001058"
     CDS             complement(12977..13660)
                     /locus_tag="PXB09_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HDL5233192.1"
                     /translation="MEREQQIPVTNIDVAPKQSSVWKTIFADGVWKNNGALVQLLGLC
                     PLLAVSNSVTNALGLGLATMFVLICTNITVSLFRKITPHDIRIPIYVMVIATVVTAVQ
                     LLMNAFAFPVYQSLGIFIPLIVTNCIVIGRAEAYASKNEVKFSAFDGFSMGLGMTFSL
                     VVLGALREIIGNGTLFSGLDLLLGDWAKALRIDVLHIDSGLLLAILPPGAFIGLGVIL
                     AVKNIIDKR"
     gene            complement(13669..14301)
                     /gene="rsxG"
                     /locus_tag="PXB09_001059"
     CDS             complement(13669..14301)
                     /gene="rsxG"
                     /locus_tag="PXB09_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDL5233193.1"
                     /translation="MNTSKITLNYALILGFIALLCTAVSTGVYLLTKGKIDDVTAMQQ
                     RKLLEEVVPKSHFDNDVLATCKLVQLENAPYLNRIYVAKKSENLTAYLVQGTAPDGYS
                     GDIVLLMGIEPNGNILGVRTLEHKETPGLGDKIETRVSDWILSFTNQLFSLENEADWN
                     VKKDGGKFDQFTGATITPRAVVNHIRQSAKWVVTELAQNPTMFNQFKACK"
     gene            complement(14301..15356)
                     /gene="rsxD"
                     /locus_tag="PXB09_001060"
     CDS             complement(14301..15356)
                     /gene="rsxD"
                     /locus_tag="PXB09_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDL5233194.1"
                     /translation="MFKMVSSPHTHSSNLTANFMLWVIAMMLPAFGVQLYYFGYGVLI
                     QTLLAVSLAIVIEIGIAKLRKKTTAFYLADLSGILTALILAMSIPPYAPYWLVLIGVI
                     VALLLAKHSYGGLGQNLFNPAMVGYALLLVSFPVQMTAWIVPIELLSEPPTFRDAISL
                     IFYGVTSDGFSIHQLVNSVDGIAQATPLDSMKSSLAKSGFDAVMNTPIFNGLFATGWL
                     QLNLAFLFGGLVLIYKRIIHWQIPVAMLATFAFFSGFTELFSQQSHLHFVSHFFSGAM
                     MFGAFFIATDPVTASITPRGKLIFGGLVGLLVYLIRYYGNYPDAIAFSVLLANICVPL
                     IDHYTQPRLYGTKLDNR"
     gene            complement(15402..16037)
                     /locus_tag="PXB09_001061"
     CDS             complement(15402..16037)
                     /locus_tag="PXB09_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDL5233195.1"
                     /translation="MFSELIPALPWSFLFIQDLIGTIVFAISGAIAARQHKMDIFGMF
                     ILAFVTGVGGGTLRDMMIGSTPVFWMKQPIYVLMITLAVVITAIFRNQISRKSWQTGL
                     LVFDAIGLGVFTVIGVQKGLDFGLHPLICVALGGVTGCFGGLIRDILRNEVPIILQKE
                     VYVTASLIGGVIFVAANSVGLESDWVYLATVFTVIIIRLLAIRFNLNLPRL"
     gene            complement(16030..18324)
                     /gene="rsxC"
                     /locus_tag="PXB09_001062"
     CDS             complement(16030..18324)
                     /gene="rsxC"
                     /locus_tag="PXB09_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDL5233196.1"
                     /translation="MSNPNLVIERIRQNKETGKLWDFPGGIHPMENKSQSNSKPIRTL
                     NLPKFFYVPLVQHSGWAGELLVKVGDVVLKGQPLTKGDHFRQLPVHSPTSGRVIGIEP
                     YVSAHASGLPEITVIIETDGKDKWVERQPIEDFLSLTSDQIIQKVYQYGIAGLGGAVF
                     PTATKLSLADKRCKLLVINGAECEPYITCDDRLMQDFTADLIEGIRILRYVLRPEEVV
                     IAIEDNKPHAIQALETALKGSNDMFVRAIPTKYPSGASDQLIQVLTGLEIPAGKRTIE
                     MGIVMHNVGTAFAVKRAIIDDEPLIERVVTLTGDKIRNKGNVWARLGTPIQHLLEQVD
                     YQADKRFPVFLGGPMMGFILPALQAPITKTANCLIAPDHFEYAPPEPERSCIRCSSCS
                     DACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCPSYIPLIQYFRQEKAK
                     IEEIEEKARKAEEAKIRFEAREARLQKERDARTARISQAAEKRREEVANAGGVDPVKA
                     ALERLKAKKAVETVQEIPAEVQVKPNGEPDNSDLMAQRRARRLAKQAEQAVEKSENVT
                     NALIGANNDLPLQSMNETASDKSVGANNYSPEAESEDPRKAAVAAALARAKAKKQAQQ
                     AVEKSENITNAVIGVNNDLPLQSMNETVSDKSVGANNHSPETESEDPRKAAVAAAIAR
                     AKAKKQAQQAVEKPEDIANAVIGVNNDLPLQSMNETTSDKSVGANNHSPKTESEDPRK
                     AAVAAAIARAKAKKAAQQEKSNNV"
     gene            complement(18311..18928)
                     /gene="rsxB"
                     /locus_tag="PXB09_001063"
     CDS             complement(18311..18928)
                     /gene="rsxB"
                     /locus_tag="PXB09_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDL5233197.1"
                     /translation="MLDLPIIAYILIAIAVIALIFGAVLGYSSIKLKVESDPIVDQID
                     ALLPQSQCGQCGYPGCKPYAEAIANGDVITKCVPGGQPLVVNLAELLGVEVPPMEGMA
                     EPEMKVAFVIEDLCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNC
                     IEMRPIKPTTQSWNWKFDQDLIIPIVNTTELQRKLVTGGGKNEQS"
     gene            complement(18928..19509)
                     /gene="rsxA"
                     /locus_tag="PXB09_001064"
     CDS             complement(18928..19509)
                     /gene="rsxA"
                     /locus_tag="PXB09_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDL5233198.1"
                     /translation="MVDYILLVISTALINNFVLVKFLGLCPFMGVSKKVETAIGMGLA
                     TTFVLTVASLSAYLMETYLLEPLNAQFLRTLVFILVIAVIVQLTEMIVHKTSPTLYRL
                     LGIYLPLITTNCAVLGVALLNVNLANNLVESVLYGFGAAAGFSLVLVLFAALRERLAA
                     ADVPRPFQGASIALITAGLMSLAFMGFTGLVKL"
BASE COUNT         5625 a         4522 c         4149 g         5550 t
ORIGIN      
        1 ctttcgccgc tttttccgcc gctaaacgtt ctgcttcggc tttttctttc gctgcttttt
       61 ccgccgctaa acgttccgct tcggcttttt ctttcgctgc tttttccgcc gctaaacgtt
      121 ctgcttccgc tttctcttta gctgcttttt ctgctgctaa acgttctgct tctgctttct
      181 ctttcgctgc cttgtctttt gctgcttttt ctgctgccgc tttatcggtt tgttgctgag
      241 tagtttgcgg tttagtattc ggttttgcca cattgtttga gctactgccc gaaccaccac
      301 tactacacgc cgttaaaccc aataaaatca aactggctaa agttactttt ttgatagaca
      361 taaaatgttc cttttgtaag ataaacaaaa atagatgtgt ataaaacaca cgcatattgt
      421 acaaaaaaaa aacaactcgt catcaagtac tttttaagat ttttttgtta aatttctcct
      481 aaatattcta caatgtcaga ggtctatatc agcttgaata caagcggtta ttttttctta
      541 aaattttaca aaaggggctt attatgtctg aaatctcaac gctcgcaccg cagctacttt
      601 ggcagtggtt tgataaagcc tgtgctattc cgcacccgtc ttaccacgaa aatgaactgg
      661 ctgaatttat tgtgaattgg gcaaaatcga aaaatttctt tgttgaacgt gatgaagtgg
      721 gtaatgtgtt aatccgtaaa ccggcaacta aaggtatgga aaaccgccaa actgtcgctc
      781 tgcaagccca tcttgatatg gtgccacaag ccaataccgg cacggttcac gatttcacta
      841 aagatccgat tcagccttat attgacggcg aatgggtaaa agccaaaggc acaacattgg
      901 gggcagataa cggcattgga ttggcttcgt gcttggcggt gttggatagc gatgatttag
      961 cccacccaac cattgaagtg ttgctcacaa tgaccgaaga agccggtatg gaaggggcga
     1021 ttggtttacg cccgaactgg ctaaccgccg atattatgat taacaccgac accgaagaaa
     1081 acggggaaat ttacatcggc tgtgcaggtg gggaaaatgt gaatgtgaca ctgccaattt
     1141 tcttggtgcc tcatcagcaa gatagtgcag taaccgttac gcttaaaggc ctaaacggcg
     1201 ggcattcggg ctgtgatatt cacaccaccc gagcgaatgc gattaaagtg ttcgcccgca
     1261 ttttggaaca agcccacaac gaagtggaat tccaaattgc agaaattcaa ggcggttcgg
     1321 tgcggaatgc cattccacga gaagcccacg caaccttggt tttctctgca aaaaatcagc
     1381 aaaaattaac cgcttgttta agccaaaccg ccgaacaagt aaaagcagaa ctcaaaattg
     1441 ccgagccaaa cttccaattt ttaattgaag aagctcaact gcctgagcaa gcctttgacc
     1501 ttgccagcac tgctcgagta atccatttct taaatgtgat gccaaatggt gtggtgcgta
     1561 atagcgatgt ggtggaaaat gtggtggaaa cctcactcag tattggtgtg cttaacaccg
     1621 aagcgagtga ggtgaaagcg accattcttg cccgctcatt aattgagggc ggaaaagagg
     1681 aaattcgcag taaaatccgc tcattaaccg cattagtggg agcagaagtg gaattttcgg
     1741 gcaactaccc gggctgggag ccaaacccaa attccaaaat cacgccatta accaaagcga
     1801 tttatgatga aattttaggt tatgaatctc aaattaaagt gattcacgca gggctagaat
     1861 gtggcttaat caacaaaatc tacccgaata tggattttgt ctcgattgga ccaactattc
     1921 tcaacgccca ttctccggac gaaaaagtgc atattccggc agtggagatt tattggaaac
     1981 tcctaaccaa actacttgaa caagcacctg agaaataaat ttaatcaaaa aaattatata
     2041 atcttgcccc gtaattaatt gaataaaacc tcaattaatt acggggtagc tcttattttc
     2101 tctgttttaa aaaatgtacc gtgaaagcag caattaataa gacgactgct gcacctaaat
     2161 aaagctcgtt ctttttccag ccggcgtcta ataaaatacc tgcaagagtt ggggaaacaa
     2221 ttgagcctaa acgccctaca ccgatggcgg tgcctacgcc cgtgctgcgg aaatccggtg
     2281 cgtatagggt tgggttaatg gtataaagcc cggtaatgca gccgttaatt aatccgccaa
     2341 ccaaaatggc tagtgttatc gcaagcccta aattgccggc aaacacaaag gcaaccacag
     2401 cagatgcagc cagaatactg aatgcctgca aaatatgttt tgccgcccag cgactgacta
     2461 aaaagccgaa aattaacgag ccgattgtac caccaactga aattgccatt cccacagttt
     2521 ggctttgggt tttaggcatt ccggcttctt ctaatagtgc cggagtccaa gagctgataa
     2581 agtaaaatga ggctgaaatt gcaataaagg caagccaaat tagcaacgta ttgcggcgat
     2641 attcaggctc gaataaacgg gtaattgcca ctttgctttt actttttgcc tcaatttcag
     2701 gaagttccca gccgtttcct aagcctaatt taacggcaat ttgatttaaa cgagctttag
     2761 cattcaccgg gtgttttgaa attaaaaatt ccaccgattc gggcaataca aagaataata
     2821 aaacgaatac cgcaccggtt aaaatcgacc caacgaggaa aaccgcacgc cagccatatt
     2881 ctccttgcaa taacaccgca gacattccgc ccagcattgc accaatccca aagcctgagg
     2941 cataaattgc aatcgctaag ccacgccatt tttggctgga gtattcactc actagcacat
     3001 tagtgccggt taaaatggcg gctacgccta aaccggttaa aacacgccat acaccaattt
     3061 caaacgcaga agtagcgaaa taagttagga gcattcctaa cgtggctaag cctgtgccga
     3121 ttaaaagcaa cgggcggcga ccaaatttat cagcaagtgg tgaaagaaag agtgagccta
     3181 tcgccatacc gaataaaccg gcactcatta agctgccgat ggctgcaccg tctaactgca
     3241 attcttctcg gatgcttttg gcggtaaagg cgagtgccat taaatcaaag ccgtccagca
     3301 tattaagtaa caccgtaagc ccaaccacta accattggaa tgaagtcatt ttgttatgag
     3361 caattttttg acgaatatcc ataagctccc tctgcatcaa aattgataaa attttattta
     3421 gagtgaacta tagaaagttg attaaatata atcaaactca aaatttacat aaaatttatg
     3481 aaagattttc atatttaatc aaaggaggga atttatagca ggaatggcga gggagaaaat
     3541 agatagggcg aataattatt cacccctaga ttgaatagga gaaagctatt tcttctccgc
     3601 ttgctcagcc gctcttttgc gtctgatttc tttcggatca gcaattaacg ggcgatagat
     3661 ctcaattctg tcgccttctt ccaccgtttc attcagtttt gccgggcggc taaaaatacc
     3721 gactttgttt tcacgcaagt caatttcggt atatttttcc aacacgccgg agagcaaaat
     3781 aatagtttga atggtcgcgt tttgcggtac ttgcagtttt ttcagaaaat atttatcagg
     3841 gtaagcataa agcacctcaa cattaatttt ctgttcttca cttttttgtt cttctggatt
     3901 ttgacgttgt tcagacacca tacacctctt ttgcacgttg tttgaaagca tttaccattt
     3961 ttaaagttaa ttcgttgaac accttgccga acaccattgc tacaattggg ctggaaaatt
     4021 caaaatttaa ttgcagggca attttgcaac tttgctcatc aaagggggtg aatgtccaag
     4081 ctccgtgtaa atggcggaaa ggcccttcaa ttaatgccat ctcgatttta tagggcggcg
     4141 tcattttatt gtgggtactg aaagtttggc taatgcctaa tttctgaatg tgtaactctg
     4201 cctttaattc attttcgccg gtgctaaggg ttttggtact cacgcagccg gataaaaatt
     4261 cggggtattt ttcatactga ttaacaagtt gatacatttg ctcggcacta taaggcacga
     4321 gggcagattg attaacgatt ggcataatgt ctcttttggg aattaacaag cggtcatatt
     4381 ttagcgtaaa tttgcaagcc tataaagaaa cgcttttgat ttgaagatag acctcttgct
     4441 ccggttgaat cgctaattca ttaaaagacc aaaggctgat cgtactccaa atttgctgat
     4501 tttcgacttg aattgccaga tcaacccgat ctaaatgcgt ttctattttc cgaacattgc
     4561 cttttaacac attacgaatt gagctttgag tcggtttttg taagctgatt gaaacctctt
     4621 tgctggcaat agttaccctt agcttctcgc ctatttgatg gcgggggagt tggttcaccc
     4681 ataatcgctg tgcgttcaag ctcaagccaa gcatattata gtggggaagt gtttcttcca
     4741 ccggtaattc aagcaggcta attcgctgat gatttggctg ccaagcggaa aatgccgagc
     4801 tgtgccaaac cgctgaaagg gtatcaaatg cggttacttt gccgttttcc aacagcacaa
     4861 gatgatctgc caatcgaact acttcctcta aactgtggct gacatacaga atcggtattt
     4921 caagccgagc ggataattta tctaaatagt ccagtagctc ttgcttacga gggagatcga
     4981 gggcagataa tggttcgtcc atcagcaaaa tattcggtga gcttaataac gcccgcccaa
     5041 tcgccacacg ttgtttttcg ccaccggaaa ggcttgccgg atagcgatta agcaaagggg
     5101 caatgcctaa cagttccaca atttgcaaaa aatccgcaga atccgaccgc ttgtagccat
     5161 attttaagtt tttttccacc gaataatgag ggaaaaggcg atgctcttga aacacatagc
     5221 caatgttgcg tttttcaggt ggtaaattga tgccgttttg gctgtcaaac agcacctgac
     5281 cgtttaattc gataaagccg gcttgagcgg ttgaaagccc cgcaattaaa ttaatcaggc
     5341 tggatttacc ggcaccggaa cgcccgaaaa tagcggtgat tcctttattc ggcaaatcga
     5401 gattgacatt gagcgtcaga ttgccgagtt gctgaagaag tttaagtttg agcatagcgt
     5461 ttttgccttt ctgccagcca ttccgaacag aacagggcaa tgagtgaaat cagaatcgcc
     5521 accaagcaca aacgggcggc agccatttcg ccatcggggg tttcaataaa ggtgaaaagg
     5581 gcggcaggaa tggtttgggt ttggttggga atgttggaga caaaggtgat ggttgcccca
     5641 aactccccca aagagcgggc aaaacccagc acgccaccgg caataatgcc tgaaaaagag
     5701 agcggtaaag tgagcgtgaa aaacactttt aacggtattg ctccaagcgt tctggcggct
     5761 tgctccaatt taggatcaac tgcctcaaag gctaaacgga tagaacgcac cattagcgga
     5821 aacgccatca ccattgaggc aagcactgct cctttccacg aaaaactcaa gctgaaatga
     5881 aaccattccc acaaatattg cccgattacc cctcgtttcg ccatcgaaat aagcaataaa
     5941 tagccaatga caaccggcgg taacaccaga gggagatgca taataccatt gagcagattt
     6001 tttccccaaa actgtttgcg ggcaagcagc cacgccaccc acacggcaag cggtaatgca
     6061 agcactacag caatggaggc aacttttagg cttagaacaa tcgcattgag ttcttgtggg
     6121 gtgaaattaa gcataatcta aaactatttg gttataagct taccctcgcc ccttgtggga
     6181 gagggataga tttttcttcg ttcagaagaa aaatcaggga gagggggaat attttaaacg
     6241 ctatttgccc tctctctgaa aaatatgtct gaacgacata tttttctgtc tctctcccac
     6301 aaggggagag agtaaattta atttacagga taaaacccag ctgcctcaaa tttcgctttt
     6361 gctttcgggg ttttgagaaa atctaaaaat gtggcggcag aggctttttc actgactgcc
     6421 gcagcagggt aaacaatttc gccgtagctt tccggtggga aaacggcaac cactttgact
     6481 ttattcgaca ctttagcatc ggtggaatag acaatcccaa gtggggattc gcctcgctcg
     6541 acaaaagaga gggcatctcg tacatttttt gccctcgcta aacgaggttc aacactttcc
     6601 cataattggt aatgactaag ggcttttttg gcatatttgc cggcaggaac gtggtttggg
     6661 tctcccaccg ataaatagct gtttgctaat tctttggcaa aatcgaccgc ttgtatcgct
     6721 tttggctcaa tgttactttc ggtaggtgca attaatacta actcgtttct gactaaattg
     6781 cggcgatgtt taactttctc aggttgtttt tcggcaacat aatccatcca cttttggtcg
     6841 gcggaaataa aaatatctgc cggtgcatct tgctcaatct gctttgctaa taccgatgat
     6901 gaagcgaagg agaacgtgat tttatcctgt ggataggctt tttcaaaatc ctgctgaata
     6961 tcttgtaaca catttgtcat tgaagcggca gcaaacacgg taatctcttg tgaaaaggct
     7021 gtgcctgata acgttaatgc cattgtaatt gctagttttt ttaatgcttt cattttcata
     7081 acctcacaat tagttaagaa cgcagcccaa cccctcgttg aattaaggaa taggcaataa
     7141 tatacaagcc gatgcaaagt gaagtaagca ctgcaaaagt ataacctaac ggcacatcgc
     7201 tgataccgag aaagccatat cttaagccgt taatcatata aacgatcggg ttgaatttag
     7261 acaccgtttg ccaaaattca ggcagtaatg aaatagagta aaatacgccg cctaagtaag
     7321 ttaagggagt aagcacaaag gttggaatca gccccacatc atcaaaggag cgggcgaaca
     7381 ccgcattaat tacgccacct aacgcaaagg caatgattgt cagcaacagg gttaagacga
     7441 taatcgcaac cgagtagatt tcaaacgaga caaacaccat tgccacgcac attactaagg
     7501 ttgcggctaa acctgcacgc aaaatactgc cggtgacata accccaaata atattatggg
     7561 tagagagtgg cgaaatcagc atctcttcaa aatctcgggt aaatttactc aagaaaaatg
     7621 aagaggcggt attcacataa gaggcggtga tggcggtcat cataattaag ccgggtgcaa
     7681 taaattgggt gtaacccacg ccattcattt ccccgattcg cccaccaatc agcgtgccga
     7741 agattaaaaa atagagcgtg gtagtaatca ccggtggcac taaagtttgt cgccaaatcc
     7801 gcaaaatgcg gcggcactct ttgtaagcta aggtataaaa tccgattaaa ttcattttac
     7861 tgagccatat tgataaatag ttcttccaag cggtttgatt tgtttcgcat acttagcacc
     7921 tcagcccctt gggcggaaat ttgcgaaaac agattggtta gcccttgctg gcgttttaca
     7981 ttcacttcaa gggtgttttc atcaagccat ttatgcgggt aattttgaat cacaagcggt
     8041 tgattttgct cagaattttg caaatctaac acaaatacct cactttccaa tttggcaagc
     8101 aaggctttca ttgaggtgtt ttcaattaat tcgccgtgtt gaataatgcc gatgtgacgg
     8161 catagggttt ccgcctcttc taaatagtgg gtagtgagaa taatagttgt gccttgattg
     8221 tttagatccc gcaagaaatc ccacaatgag cggcggagtt caatatccac ccctgcggta
     8281 ggttcatcta aaatcagtag ttttggattg tgcattaagg ctcgggcaat catcacccga
     8341 cgtttcattc caccagaaag ctcacgggtg aggtgggtgc gtttttccca taggtcgagc
     8401 aatttcagcc acttttcggc acgtactaag gcttcactgc gaggaatgcc gtaaaacccg
     8461 gcttgttgca ctagcacatc aatcactttt tcaaactgat tgaaattaaa ctcttgtggc
     8521 actaagccga tttgatgctt taattcgact ttttgggtgt ctaaatcata gccaaacact
     8581 ttcacgctgc cgctggtttt atttaccagt gagctgataa tgccaatagt agtagattta
     8641 cctgccccgt tatgcccaag tagggcatag aaatcacctt gctcgaccac aagattaatg
     8701 cctttaacgg cttttacacc tgttgggtag gtttttacca aatcaattaa ttctaatgct
     8761 ttcatttgtt ttactcagtt tccgccaccg ctcgaatggt cgattcatca atttgtgcat
     8821 caaaagcgtt gcgaagtaac attaattttt catcgttaag cagagctgat tttgctgcct
     8881 cagttaattg tttgaaaatg gctcgccgaa tttcaagcgg agtttgctgt tcgctattgt
     8941 caccaatggt caattcgtat gaatagcctt tttcggcaag ggcagcttct aaatttttac
     9001 gtgattccgg attatctaag tgagccatat tcggctttaa caccaatgcg aggtgctgtt
     9061 cattttgttc cgctaaatag ctatttaagg cgatctgacg ggaaaatccg cctaaattga
     9121 gtgagttggc gatgtcacac catttatcct gctgacaaga taaatgaatg gtttttgcca
     9181 ctaattcagg ggtgcgttct tgcaaaatcg cttgtttaat atcagaaggt ttggcactgt
     9241 ctgcttgatt ttctaattca ggattgagcc acgtccagcg ataatcttca tcttccacac
     9301 ttttaggggc ggattcggtt ttctttgaaa cttgcagtac ggctttgtgc tgattttccg
     9361 ccaagctgat aaaccgctct tgcaatgaag cggtctgatt tgccgatttt tttgcaataa
     9421 cttgaggggc ttttagctca ggcttttttt tttcggtttg agctaaattt gcctgctgtg
     9481 cttgtagctt tttgcgggct tcgagggctg ccattgccgg tgaaagagtc gcaggagcag
     9541 acggcgaaat agcggtatct actgcctgtg gcggttgagc aatgctttca accgctgtgg
     9601 tagtattggc aacagtaacc gttttttgct gattttgctc aaaattttct cttagctggc
     9661 taatttgatt ttgtggtttt gctgtcgtaa ccgctgaaac cgaatggttt ggttgtgtaa
     9721 ccttttccac tgcaactgtt gctatttttt ctgcctgttt agggtggaaa gccaacgcac
     9781 gcaaaatcgc catttcaaca ccggcacgtt gctccggtgc aaaaggcaac tcttttttac
     9841 tgttgaggat taattgatag aaaaattgca cgtcttcggg cggaatttgt tttgccagaa
     9901 aatgcactaa tgtttcttcg gttgtaggtg ttttcactaa ttgcaacatt gcaattttgt
     9961 gtaacacttc tgccacatcg cttaataatt gttgccaatc aacgcctttc gctgcaattt
    10021 gctcgatgat cgccattgct ttttcaccgt cggcttgggc ggttgcttgc actaattcta
    10081 gtggttgatt atcgtcaatc aaccctagca tttggctgac tatcgcaagc gtaatattgg
    10141 cattactcat tgcaatggct tgatcggtga ggctgagaga gtctcggata ctaccttgtg
    10201 ctgcttttgc caacttttct agtgccaaag gctcaaacgg aatgttctct gcatttagaa
    10261 taaattcaag atgacgggca atttgcgatt gctctaatgc ccgcagatga aattgcatac
    10321 agcgagagag gatcgtaatc ggcagttttt gcggatcagt ggtagccagc aagaatttga
    10381 catattcagg cggctcttca agggttttta gtaaggcgtt gaaactatga cgagagagca
    10441 tatgcacttc gtcaattaaa taaaccttaa aacgcccaac ggtgggtttg tattgaacgt
    10501 tatcaagtag ctcacgggtg tcttccactt tagtacgaga agcagcatca atttcaatga
    10561 gatcgataaa atgcccttct tcaatcgctt tacaattcgc acattcaccg caaggctcgg
    10621 cggtgatccc gtttacacag tttaagcctt tggcgaataa acgggcaata gaggttttac
    10681 ccacaccacg agtgcctgaa aacaggtaag cgtggtgcag tctatcttct cttaagctgt
    10741 tttcaagagc agataaaacg tgttgctgac caactacttc cgagaagcgt tgcggtctcc
    10801 atttacgggc taaaacttga taactcattg atttttctat tcaatttgga aatcacaagc
    10861 ggtcatcttt ccgaaaaatt ttgcaaaatt ttagcaaaaa gccaccgctt gttccccatt
    10921 aatgaccttc aaagctgact aggctaaagg atttaacccc ttctttttcc aaacgctctt
    10981 taccacctaa ctcaggcagc caaatcacaa aggcagcgtg ttctacgtta ccacctaagc
    11041 gacgaattag ttttgcagtt gcatcaatag taccaccggt tgcgagtaaa tcgtcgatga
    11101 ccaatacatt atcattagca ctcactgcgt ctttatgaat ttctagcgtg tcttcaccat
    11161 attcaagcgt gtaagattgc gaaatcactt cacgtggtaa ttttttcggt ttacgaacca
    11221 acacaaaagg cacgcctaac gctaatgcaa caggggcacc aaaaataaac ccgcgagatt
    11281 ctgtgccgac aattttagta atacctttgt ctttaaattc tgcaacgatg gcatcaatgg
    11341 tggcttggaa tgcagttggc acttctaaaa gtgaagtgat atcacggaag ataatccctg
    11401 ctttcggata atctggaatg gatttgatag aagatttaat taaatctaat tggttcattg
    11461 tttgacctac gtgtaataaa aaaataactg gaaaactcta tagaaaaaca gcagaaattt
    11521 caaggagaaa ttgataacct tacgtttgat agtacagctt acttttcagt ttccttttcc
    11581 ctatattata gataaatatc ttccctgttt cgtctggttt taagcaaacg taaaatccaa
    11641 acatactgct cggggttttt ctccacaaaa tattcaatta ctcggttcat ttctcgggcg
    11701 gattgaattg ggtctcctga aaattcaagc ggtggcaaaa tttccatttc atattttgct
    11761 ttttccgcat tataaatcga gaacattggg atcacttccg catttgccac tcttgccatt
    11821 ttatttaagc ccggcaaagt ggctttttcg gtggcaaaaa agtcggcata cacacttagc
    11881 tcttcgccga aatcttcatc gggcagaaaa taaccaacat cacctttacg cacatcggct
    11941 aaaaacgctt taatcccatt ttgacgagtg tgcattcgcc cacctaaacg ctcacgggta
    12001 atattccaca gccagtccac caacgcatta cggtgtggat tgtacattga tgtcatcgga
    12061 taaccgagcg agaacatcgc cacccccgcc atatcaatcg accaagtatg tggcactaac
    12121 ataatcacgt ttttaccgct ctctttggct ttcaccacat tttcaaagcc ggtaaattca
    12181 caccgttttt gtaaataaga ggccgggcgg attgcagttt cgccaatcgc caacatggtt
    12241 tgtgctaccg tgataaacat tttctcgacc acttcttcac gctttttctc actccaatcg
    12301 ggaaaacagt aacgcaaatt cactttagca cggtggtagc cttttttatt tttctgcttg
    12361 agatagcgat acgccatctt acccacaaaa gcggataatt tatccctaat tcgcaccggc
    12421 acataggcta aaatcactaa tcctaataca cctaaccata cgccccaata tttcgggtgt
    12481 agaaaagacc ataggaattt gtgcgtatag ccgtcttggg cggtaattcg tgtcattcta
    12541 taattcctca ttatttgtca ctttctttgc ttcgccaaag aaagtaacca aagaaaggca
    12601 accctacttc accgctatct tcgcttggtt tgaatttgct taacgaaaaa attccaaact
    12661 cgccgcttcg ctgctcaaac aaggaatttt tcctacaaat tcaaagtcgt tcgggcggtt
    12721 cagaagggaa cccggcagag catcattttg caaaattttc caaaaaaatc accgcttgta
    12781 tggtcggatc gggttccctt ctgagttgcc cgaacgactt gaaattttta ggaaaataac
    12841 tcgagcgaga gcgaagcgaa catcagggtt atttttcgtt aagaaaattt caaccaagtg
    12901 aggatagcaa caaagcaggg tgtgctttct tttggttact tttctttgca caagcaaaga
    12961 aaagtgacat aacacatcat ctcttatcaa taatattctt caccgccaat atcaccccaa
    13021 gtccaataaa agcccccgga ggtaaaattg ccagtagtaa acctgaatca atatgcaata
    13081 catcaatgcg tagggctttt gcccaatcgc caaggagtag atctaagcct gaaaacagcg
    13141 tgccgttgcc aataatttca cgcaacgcgc ctagcaccac aaggctaaaa gtcattccca
    13201 gccccattga aaagccgtca aaagccgaga atttgacctc attttttgag gcataggctt
    13261 ctgctcgtcc aatcacgata cagttggtta caatcagcgg aataaaaatc ccgagcgatt
    13321 ggtaaacagg gaaagcaaaa gcattcatta aaagctgtac tgccgttacc accgttgcaa
    13381 ttaccatcac ataaatcgga atccgaatat cgtgtggagt gattttccga aacagggaaa
    13441 ccgtgatatt ggtgcaaatt agcacaaaca ttgttgccaa gcctagtcca agtgcattgg
    13501 ttacgctgtt tgaaaccgcc agtagtgggc aaagccctaa taattgcacc aaagcaccat
    13561 tatttttcca cacaccatca gcgaaaatcg ttttccaaac gctggattgt ttcggggcaa
    13621 cgtcaatatt cgtcacaggg atttgttgtt ctctttccat ttctccccct atttgcacgc
    13681 tttaaattga ttaaacattg tcgggttttg agccagctct gtcaccaccc atttcgcact
    13741 ttggcggata tgattgacca ccgcacgagg tgtaatagtt gcaccggtaa attggtcgaa
    13801 cttgccgcca tcttttttta cattccaatc cgcttcgttt tctaaactaa aaagttgatt
    13861 ggtaaaagat aagatccaat ccgacactcg ggtctcaatt ttatctccca gccccggagt
    13921 ttctttatgc tcaagggtgc gaacgcctaa aatgttgccg ttcggctcaa tccccatcaa
    13981 tagcacaata tcgccggaat agccgtccgg agccgttcct tgaactaggt aagcggtcag
    14041 attttccgat ttttttgcaa cataaatacg gttcaaataa ggggcatttt cgagctgaac
    14101 cagtttgcaa gtcgccaaca catcattatc aaaatggctt ttcggcacaa cctcttccaa
    14161 taatttgcgt tgttgcattg cggttacatc atcaatcttg cctttggtaa gcaggtacac
    14221 accggttgaa acagcggtgc aaagcaaggc aataaagcct aaaattaagg cgtaatttaa
    14281 ggtaattttt gaggtgttca ttatctgtta tccaattttg tgccgtataa tctcggctgc
    14341 gtataatggt cgattaacgg tacgcaaatg tttgccaata acactgaaaa tgcaatcgca
    14401 tcagggtaat ttccgtagta gcggattaga taaaccaata atcccaccaa gccaccgaaa
    14461 atcagttttc ctcttggggt aatggaggct gttaccgggt cggtcgcaat aaaaaatgcc
    14521 ccgaacatca tcgcaccgct aaagaaatgg ctcacaaaat gcaagtgcga ttgttggcta
    14581 aacagctcgg tgaatccact aaaaaaggca aaagttgcca acattgctac cggaatttgc
    14641 caatggataa tccgtttata aatcaacacc aaaccgccga ataagaacgc aaggttcagt
    14701 tgtagccaac cggtcgcaaa cagcccgttg aaaatcggcg tattcattac cgcgtcaaaa
    14761 cctgattttg caaggctgct tttcatacta tcaagcgggg tagcttgtgc aatgccatca
    14821 acactattaa ctagctgatg aatactaaaa ccatcgctag ttaccccgta aaaaatcaac
    14881 gaaatcgcat cacgaaatgt cggtggttca cttaataact caatcggcac tatccacgcc
    14941 gtcatttgca ccgggaaaga aaccaacaac aacgcatagc caaccattgc cgggttaaat
    15001 agattctgcc ccaagccacc ataactgtgt tttgccaata ataacgccac aatcacgcca
    15061 atcaacacaa gccaataagg agcataaggc ggaatcgaca tcgccaaaat caaggcggtt
    15121 aaaatacctg ataagtcagc caaatagaaa gcggttgttt ttttgcgtaa ttttgcaatc
    15181 ccgatttcaa tcacaatcgc aaggctaacg gcaagcaacg tttgaatcag cacaccatag
    15241 ccgaaataat aaagctgaac cccaaaagca ggtaacatca tcgcaatcac ccacagcata
    15301 aaattcgcag tgagattgct cgaatgagtg tggggggaac tgaccatttt aaacatctat
    15361 aaaacctttt tagtaaaaaa ttgcaaaaaa atgaccgctt attaaagtct cggcaaattc
    15421 aaattaaagc gtattgccag caggcggata ataattacgg tgaacacggt ggcaaggtaa
    15481 acccaatcgc tttcgagccc aactgagttt gcagccacaa aaatcacacc accgataagg
    15541 ctggcggtca catacacttc tttttgcaaa atgatcggca cttcgttgcg taaaatatca
    15601 cggattaagc caccaaaaca gcctgtcaca ccgcccagag ccacacagat cagtgggtgc
    15661 aagccgaaat ccaagccttt ttgcacgcca atcacggtaa atacgccaag cccgatggca
    15721 tcaaacacca gcaagccggt ttgccaactt ttgcgggaaa tttggttgcg gaaaatagcg
    15781 gtaatcacca ctgcaagggt aatcatcagc acatagatcg gttgtttcat ccaaaacacc
    15841 ggcgtggagc caatcatcat atcccttagc gtaccgcccc cgaccccggt cacaaacgct
    15901 aaaataaaca taccgaaaat gtccattttg tgctggcggg cagcaattgc ccccgaaatc
    15961 gcaaacacga tagtgccgat taagtcctga ataaacagga acgaccacgg caatgccgga
    16021 attagctcgc taaacattgt tgcttttctc ctgctgagcg gcttttttcg ctttagctct
    16081 ggcgatggcg gccgcaacgg cggctttgcg tgggtcttcg ctttccgttt tgggcgaatg
    16141 gttattcgcc cctacagatt tatccgatgt agtttcgttc attgattgta ggggcaaatc
    16201 attatttacc ccaatcacag cattggcaat atcttccggt ttttcgaccg cttgttgagc
    16261 ttgttttttc gctttagctc tagcgatagc tgctgcaacg gcggctttgc gtgggtcttc
    16321 gctttctgtt tcgggcgaat ggttattcgc ccctacagat ttatccgata ccgtttcgtt
    16381 cattgattgt aggggcaaat cattatttac cccaatcacg gcattggtaa tattttctga
    16441 tttttcgacc gcttgctgtg cctgtttttt ggctttggct cgggcaaggg cagccgcaac
    16501 ggcggctttg cgtgggtctt cgctttctgc ttcgggcgaa tagttattcg cccctacaga
    16561 tttatccgat gcagtttcgt tcattgattg tagaggcaaa tcattatttg ccccaatcaa
    16621 ggcatttgta acattttccg atttttcgac cgcttgttct gcctgtttgg ctaaacgtct
    16681 ggctctgcgt tgtgccatta aatcgctgtt atcaggctcg ccgttaggtt ttacctgtac
    16741 ttctgccggt atttcttgga ctgtttcaac cgcttttttc gctttcaggc gttcaagagc
    16801 cgcttttaca ggatcaacac cacctgcatt tgccacttct tcacggcgtt tttccgccgc
    16861 ttggctaatg cgagcagttc tggcatctcg ttctttttgt aagcgagctt ctctcgcctc
    16921 aaagcggatt ttagcctctt ccgctttgcg ggctttttcc tcaatttcct cgatttttgc
    16981 tttttcttgg cggaaatatt ggattaacgg aatgtagctt gggcaaacgt aagcacaaac
    17041 gccacactca atgcaggcat ctaaatggta ttctttcgat ttatcgtgat cttctgcacg
    17101 ggcaaaccaa taaagttgct gtggcaataa ccccaccggg caagcatcgg aacagcttga
    17161 acagcggata caactacgct ccggttcagg tggtgcatat tcaaaatgat caggggcaat
    17221 caagcagttc gcagttttgg taatcggggc ttgcaatgca ggcaaaataa agcccatcat
    17281 cggtccgcct aaaaacaccg gaaagcgttt atcggcttga taatctacct gctccaacaa
    17341 gtgctgaatt ggcgtgccta atcttgccca cacgttcccc ttgttgcgaa ttttatcgcc
    17401 tgtcagcgtc actacccgtt caatcaaagg ttcatcatca ataattgccc gtttaaccgc
    17461 aaacgccgtg ccgacattgt gcatcacaat gcccatttca atagtgcgtt tgccagccgg
    17521 aatctcaagt ccggtcaaca cttgaatcag ctgatcagaa gctccggagg gatatttagt
    17581 cgggatcgcc cgcacaaaca tatcgttcga gccttttaaa gcggtttcta aagcttgaat
    17641 agcgtgcggt ttgttgtctt caatcgcaat caccacttct tccgggcgaa gcacataacg
    17701 cagaatgcga ataccttcga taagatccgc agtgaaatct tgcattaagc gatcgtcaca
    17761 ggtgatgtaa ggctcacatt ctgccccgtt aatcaccagt aatttacagc gtttatccgc
    17821 caaacttaat tttgttgcgg ttgggaatac cgcaccgcct aaaccggcaa tgccatattg
    17881 gtaaactttt tggataattt gatcgcttgt taggcttaaa aaatcctcaa tcggctggcg
    17941 ttccacccat ttatctttac catcggtttc aataatcacc gttatttcgg gcaaacctga
    18001 ggcgtgagcg gaaacataag gctcaatccc aatcacccgc ccggaggttg ggctgtgtac
    18061 gggcagttga cggaagtgat cgcctttcgt gagcggctgc cctttcaata ccacatcgcc
    18121 gactttgact aataattccc ctgcccagcc agaatgttga accagtggca catagaaaaa
    18181 cttcggtaaa tttaaggtgc gaattggctt gctgtttgat tgggatttat tttccatcgg
    18241 gtgaataccg cccgggaaat cccacagttt acccgtttct ttattttggc ggattcgctc
    18301 aatcactaaa ttaggattgc tcatttttgc ctccgccggt aactaatttt ctctgcaatt
    18361 cagtggtatt cacaatcgga ataattaaat cttggtcaaa tttccagttc caagattggg
    18421 ttgtcggttt aattggtcgc atttcaatac agttggtcgg gcaaggggcg acacaaagtt
    18481 cacagccggt gcaaagatcc ggaataatgg tgtgcattgc tttattcgtg ccgataatcg
    18541 catcaaccgg gcaagcctga atgcacttag tacagccaat gcagagatct tcaatcacaa
    18601 aagccacttt catctcaggc tctgccatac cttccattgg cggcacttct accccaagca
    18661 attcggcaag attcaccact aaaggttgtc cacccggcac acatttagtg atcacatcac
    18721 cattagcaat cgcctcagca taaggcttac agcccgggta gccacattga ccgcattggc
    18781 tttgtggtaa aagggcatca atttgatcga caatcgggtc ggattcaact ttcagtttaa
    18841 tcgaggaata gcctaaaacc gccccgaaaa tcagtgcgat cacagcaata gcgataagaa
    18901 tataagcgat aattggcaaa tcaagcatta gagtttcacc aatcctgtaa agcccataaa
    18961 ggcaagcgac atcaagcctg cggtaatcag agcaattgat gctccttgga acggacgagg
    19021 cacatcagcg gcagccaaac gctcacgcag agccgcaaat aaaactaaca ccagcgagaa
    19081 accggcagcg gctccaaaac cataaagaac agattccacc aagttattgg ctaaattcac
    19141 gtttaataat gccaccccta atacggcaca gttggtggta atcagcggta aatagatccc
    19201 aagcaagcga taaagtgtcg ggctggtttt atgcacaatc atttccgtta attgcacgat
    19261 caccgcaatc actaaaataa acaccaaggt acgcaaaaat tgagcgttta acggctcaag
    19321 caaataggtt tccatcaaat aagcagagag cgaggcaacc gtcagcacaa aggttgtcgc
    19381 caaccccata ccaatagcag tttccacctt tttcgacact cccataaacg gacaaagccc
    19441 tagaaattta actaagacaa agttattaat aagggcggtg ctgatgacca acagaatata
    19501 atcgaccata aattccacaa aattaaatat acaagcggtc aaaaacgcat tttattttgc
    19561 aaaaaacaga gaaaatctga ccgtttgtta aagcatctca ttaaaaataa acgttatatt
    19621 atctcttgtt ttcggctcat tcacaataag aaatcggagg tacttctagt aaacatacca
    19681 tatcaaatat gatcttgtta cctttgtttc tatctctggt agaatggaga atgtggggac
    19741 taagctatac agcatgaaag gtgaaaggag cttgattttc taagttaatc ctaaaaagtc
    19801 tcactccttt gatatagagg atattagaat aacaaccaat taatta
//
LOCUS       DANLTI010000039        19425 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.039, whole genome shotgun sequence.
ACCESSION   DANLTI010000039 DANLTI010000000
VERSION     DANLTI010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19425
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.039"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            215..463
                     /gene="rpsP"
                     /locus_tag="PXB09_001065"
     CDS             215..463
                     /gene="rpsP"
                     /locus_tag="PXB09_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDL5233199.1"
                     /translation="MVTIRLTRGGAKKRPFYQIVVVDSRSPRDGRFIERIGFFNPLAA
                     GQAERLRLDVAKVDAWVAKGADLSDRVASLVKEARKAA"
     gene            496..1023
                     /gene="rimM"
                     /locus_tag="PXB09_001066"
     CDS             496..1023
                     /gene="rimM"
                     /locus_tag="PXB09_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDL5233200.1"
                     /translation="MSEQKIEVVGKLGSTYGIRGWLRLYSSTEQTESIFDYQPWFLKI
                     KGQWQQVELESWRYHSNDLIVKLKGTEDREAAQLLTNAEIGVDLSVFPELEEGDYYWH
                     DLIGCSVVNLEGYTMGTVAEMMETGSNDVLVVRNNGKDAFGKQERLIPFLYEQVVKRV
                     DLATKTITVEWDAGF"
     gene            1068..1823
                     /gene="trmD"
                     /locus_tag="PXB09_001067"
     CDS             1068..1823
                     /gene="trmD"
                     /locus_tag="PXB09_001067"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDL5233201.1"
                     /translation="MWIGIISLFPEMFKAITDFGVTGRAVKQNLLQVECWNPRDFTFD
                     KHKTVDDRPYGGGPGMLMMVQPLRDAIHAAKKAALAVEGGEAKVIYLSPQGRKLDQNG
                     VQTLASNQKLILICGRYEGVDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFV
                     PGVLGKQASALEDSFAEGLLDCPHYTRPEVLDGMPVPEVLMSGHHEQIRKWRLEQSLE
                     RTWLRRPELLDSLALTDEQRVLLAKIKKQHKIS"
     gene            1850..2200
                     /gene="rplS"
                     /locus_tag="PXB09_001068"
     CDS             1850..2200
                     /gene="rplS"
                     /locus_tag="PXB09_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDL5233202.1"
                     /translation="MSNIIKQLEQEQLKQDLPSFRPGDTLEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPVIDSISVKRKGAVRKAKLYYLRE
                     RSGKSARIKERLGD"
     gene            2356..2712
                     /locus_tag="PXB09_001069"
     CDS             2356..2712
                     /locus_tag="PXB09_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233203.1"
                     /translation="MKQLSIRLPDDEFTFIKTFASAHKLTLQNFVMSAIQAKVAEMSA
                     KNKISEESNIHQPLSKDEKIMLNEAKVFYSARSHLKAENVILPSDFMEQIKSGCGAEK
                     MAEMMGYTKEDWESMK"
     gene            2714..3037
                     /locus_tag="PXB09_001070"
     CDS             2714..3037
                     /locus_tag="PXB09_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233204.1"
                     /translation="MGQITFSNIFTKVIFENVLSASTKEKIKQMLFQSVVALPPLHSE
                     RKMILQLKKQKITIFYQVIEEQSVQILAYQFGGTDKLTGVSKAHFKTLDAIFQMTDEE
                     KEGKF"
     gene            complement(3047..3379)
                     /locus_tag="PXB09_001071"
     CDS             complement(3047..3379)
                     /locus_tag="PXB09_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL5233205.1"
                     /translation="MQIEQYQQWVRQFYQQQGWYERSPFMRVTYLAEEIGEVACAVRA
                     IEIGRERPDETEASQQQKRDNLIEELGDVMDNLFVLADKYGISMTEVLERHQAKFEKR
                     YLQKNMEK"
     gene            complement(3472..4668)
                     /locus_tag="PXB09_001072"
     CDS             complement(3472..4668)
                     /locus_tag="PXB09_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDL5233206.1"
                     /translation="MNIPFCLPENISPETFLREYWQKRPLLIRNGLPQIVGLFEPEDI
                     LELALEEEVTARLIQCENEKWSVKSSPLVEEDLEELPVQWSVMVQNLEQWSPELGELW
                     QAFGFIPQWQRDDIMVSCSPLNGTVGKHYDEYDVFLVQGYGQRRWQLGKWCDPSTEFK
                     PNQPIRIFDDMGELVMDEVMNPGDVLYVPSRMAHYGVSESEQGLTFSFGLRYPNATDL
                     LENLCKTIEQQADNINSSEFHLPFRLTPNEQPNALLDPKMVKMFKHQLIDLLQNSEQF
                     DELLTHSVATAASSRRYELLQTDNEYYPDEVQEILEAGGWLQQDANVKILYTENPQRV
                     YVNGEWIDELNEAEMALLIRIANGDSISWNKLASKVQDQAELELMLDTICDWLDSGWI
                     ILSEAE"
     gene            complement(4817..6160)
                     /gene="accC"
                     /locus_tag="PXB09_001073"
     CDS             complement(4817..6160)
                     /gene="accC"
                     /locus_tag="PXB09_001073"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDL5233207.1"
                     /translation="MLEKVVIANRGEIALRILRACKELGIKTVAVHSTADRELKHVKL
                     ADETICIGPAPSVKSYLNIPMIIAAAEVTNADAIHPGYGFLSENANFAEQVEKSGFIF
                     IGPTADVIRLMGDKVSAINAMKKAGVPCVPGSDGPVGNDPKKNKEIAKRIGYPVIIKA
                     SGGGGGRGMRVVHHEKDLEESIAMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADT
                     HGNAVYLAERDCSMQRRHQKVVEEAPAQGITPELRQFIGERCANACREIGYRGAGTFE
                     FLYENGEFYFIEMNTRLQVEHPVTEMITGVDLVKEQLRVAAGLPLSITQDDIKVKGHA
                     IECRINAEDPNTFLPSPGKITRLHVPGGLGVRWDSHIYSGYSVPPHYDSMIGKLITFA
                     ENRDIAIRRMENALSETIVEGIKTNIPLHTQILADKEFRKGGTNIHYLEKKLGLK"
     gene            complement(6232..6699)
                     /locus_tag="PXB09_001074"
     CDS             complement(6232..6699)
                     /locus_tag="PXB09_001074"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDL5233208.1"
                     /translation="MDIRKIKKLIELVEESGITELEVSEEEGTVRISRAAPAVAPAAV
                     QYAAAPVVAPAAPQVASTVPVAAPAEAPKAAETSGHAVLSPMVGTFYRSPSPDAKPFV
                     EVGQTVKIGDTLCIVEAMKMMNRIESDKAGVVKEILVNDGEPVEFDQKLFIIE"
     gene            complement(6952..7734)
                     /locus_tag="PXB09_001075"
     CDS             complement(6952..7734)
                     /locus_tag="PXB09_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDL5233209.1"
                     /translation="MAVKNEQFIVICNGVFRLFGNIVKILSYPFHALFPKKRFTIPEY
                     SPAKIQSSIPSKITKTIWQTNYSNKVTLPMYANYLFNRLMSLSYDYRYVSTEEREAYI
                     KANADERTFNAYSKLTDGAAQADFWRIFTLLREGGIYIDIDGHLVYPLSKIIGENDSE
                     VLIKRRDKYTNFFLASEAGNWILKDTLELIISNIENRRIEGGVFVMTGPDTLNNAIGD
                     KEVNFRRDKVTCAQGTFTNEYFQYIDKPGSKWNYKKNEDLLK"
     gene            complement(7744..8181)
                     /gene="aroQ"
                     /locus_tag="PXB09_001076"
     CDS             complement(7744..8181)
                     /gene="aroQ"
                     /locus_tag="PXB09_001076"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDL5233210.1"
                     /translation="MKKILLLNGPNLNMLGKREPQIYGSQTLADIENHLKKLAAAQDV
                     ELESFQANGEEPIINRIHQAFQHTDFIIINPGAFTHTSVAIRDALLSVSIPFVEVHLS
                     NVHSREPFRHHSYLSDIAKGVICGLGAKGYEYALDFAISHLKA"
     gene            complement(8267..8635)
                     /locus_tag="PXB09_001077"
     CDS             complement(8267..8635)
                     /locus_tag="PXB09_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5233211.1"
                     /translation="MAFTIRKMVEQDTHQVFPLMQKLAVFEHYIDSFAITPEVVMESG
                     FRKSPPDFYCLVAENASNIIGILVYYFLPYTAQNRPAIYMKELYVDETARNQKVGEAL
                     MQALKNEAKAHHCKTIKSLE"
     gene            complement(8695..9519)
                     /gene="dapD"
                     /locus_tag="PXB09_001078"
     CDS             complement(8695..9519)
                     /gene="dapD"
                     /locus_tag="PXB09_001078"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDL5233212.1"
                     /translation="MSLQAIIEAAFERRAEITPKTVDAETKAAVEEVIAGLDNGSLRV
                     AEKKDGEWVVNQWVKKAVLLSFRIADNEIIDGAETKFYDKVPTKYGNYTEEQFKADGI
                     RAVPGAVVRKGSHIEKNVVLMPSFVNIGAYVGEGTMVDTWVTVGSCAQIGKNVHLSGG
                     VGIGGVLEPLQANPTIIGDNCFIGARSEIVEGVIVEDNCVISMGVFIGQSTKIYDRET
                     GEVHYGRVPAGSVVVSGSLPSKDGSHNLYCAVIVKKVDEKTLSKVGLNDLLRSIDE"
     gene            9667..10329
                     /locus_tag="PXB09_001079"
     CDS             9667..10329
                     /locus_tag="PXB09_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDL5233213.1"
                     /translation="MENFANLLTGKTREHLVPLPNALSDKHYLQPQVVEAFLTLQHAA
                     KQAGFNLQPASTFRDFERQKGIWNAKFRGERKVHDDNGVAIDMAALSDLEKCKAMLRW
                     SAVPGASRHHWGTEIDIFDPDLLPENTPLLLEPWEYLEGGYFADLTKWLHVNAETFGF
                     YFPFDGKHSRVGFEPWHISYRPISNEYEQRFNDEILKAAWQDEEVAGKECLLEHFEEL
                     LK"
     gene            10326..11078
                     /locus_tag="PXB09_001080"
     CDS             10326..11078
                     /locus_tag="PXB09_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5233214.1"
                     /translation="MIQLINETQQHDKFRQICDKWQLVEDKSSPLALVLTEERLELRK
                     LDEPKLGAIAVNFVDGTMAHRRKFGGGRGEAVAKAVGIKGDYLPTVIDATAGLGRDAF
                     VLAAVGCKVLLVERNPIVAALLEDGLNRAYQDVEIGSFMQERMILADVRDISQLDPQS
                     QMAEVVYLDPMYPHKQKSALVKKEMRVFQHLVGADLDSDSFFLPAKGLAKKRVVVKRP
                     DYAPFLAEQKPDFSHTTKNHRFDVYLSHLKND"
     gene            11169..12005
                     /gene="ftsN"
                     /locus_tag="PXB09_001081"
     CDS             11169..12005
                     /gene="ftsN"
                     /locus_tag="PXB09_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDL5233215.1"
                     /translation="MPQRDYVARSNEKKSKKNQKESNVKKILMRIIGVILFFGIGLWF
                     LKSSAPVPTVPSAPQPANSQTKSELPSRPEETWSYIRDLETRTVITDNSQTSQERLAQ
                     LTAEQKQQIEERRKQEEARLAAEQAQQKPATDVSATELAPKTEEVKSLTEEELAAKKA
                     QEQALAQKQAEEKRRQAELKKQQEAKKEQPAKIVASAATLADKAANQAGKFGLQCGAF
                     KNKAQAENMQARLAMAGFNARIASSADWNRVFVGPIGDRAATSRAQSNARSVAECVIV
                     AM"
     gene            complement(12047..13228)
                     /locus_tag="PXB09_001082"
     CDS             complement(12047..13228)
                     /locus_tag="PXB09_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5233216.1"
                     /translation="MKTELDMIVIGGGMIGAATALGLAKQGLRLALLEKNPLPTFNPD
                     SDYDLRISAISMGSIQLLEKLGVWEQIVAMRSTPYTQLETWEIDGFNTLFSAADLGLE
                     KLGDMVENNVIQIALWEQLKQYPNCLQAVGFEQIFANKAGEYWEVTVDGNTFAAPLLI
                     AADGANSQVRQWAGIGLTAWQYRQHCLLATVTTEKPAPSGTWQQFYPTGPRAFLPLSG
                     NHGCVVWYDSPQKIAELKMLPAEKLGVAIEQHFPSRLNAELGNIQVQASGAFPLTRQH
                     AQHYVQNGVVLVGDAAHTINPLAGQGVNLGFKDVKTLLEVIEQAVKKGKNFASEQVLQ
                     RYEQKRKPDNLLMQTGMDVFYKAFKTDLLPLKIARNVGLVLADKVSPIKKQALKYAIG
                     I"
     gene            13335..13673
                     /locus_tag="PXB09_001083"
     CDS             13335..13673
                     /locus_tag="PXB09_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233217.1"
                     /translation="MSCKTHANHEHEHGEGCGHTAIKHNDHIDYLHDGHLHHNKHGDH
                     YDEHVLEVNETNPADCNAAHCCGDHVHGEVCGHEAVPHGDHIDYIVNGRLHHQHGDHC
                     DDHGPVEIVK"
     gene            13805..14674
                     /locus_tag="PXB09_001084"
     CDS             13805..14674
                     /locus_tag="PXB09_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDL5233218.1"
                     /translation="MTLAIVYSRASIGVEAPLVTIEVHISNGQPKLTIVGLPEATVKE
                     AGDRVRSALLNANFIYPPQRITINLAPADLPKEGGRFDLPIAIGILAASGQIDSDLLT
                     QFEFLGELALTGHLRGVHGTIPAVISADKAKRQMILAKQNANEASLVSNATTYFAGSL
                     LEVVNMLNKRDKLPICQHISQHSAEIRPLVSRDLTDIIGQQHAKRALMIAAAGQHNLL
                     FLGPPGTGKTMLASRLADLLPEMTDEEAIETASVTSLVQNELNFQNWKQRPFRSPHHS
                     ASMVALVGGGCEN"
     gene            14766..16577
                     /locus_tag="PXB09_001085"
     CDS             14766..16577
                     /locus_tag="PXB09_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233219.1"
                     /translation="MFYLNNDNFKREPYRGYCPSHLEKLFTKPHLDIRGNGYYYPDNE
                     YVVAWYESDFIFKSRKAQAHAKVKLVNLTCPKYTGKNSAEYLSVLYISVPLNYLHYFT
                     IGSIWKGGVAKEQFALEEFYITVEAENQDGKRENLSIVSFGESEENGLEKPFDYTIYT
                     IPTEYHNYGDDLNRLLSISYQNQKFIIHPLHIFMMHYGYSTDIKRILATYPLDEVRER
                     LFIDKVVENFDVERYVVLPKYFVKKDAIFLYHFKYDEETTGTRVKKLVSQFRLNIHNQ
                     THPIEIDFWHTQKVELKIRGVRLGNAVLCAEIIGLNQPEGEDITLVLSQSKREKSGNK
                     TEEQNNEVNNVPITRVYTREPELDELPLTDNSPDNRTVEYNKRQFELLGRQRQIRALK
                     KAREESNQKMKALTPDEIDSLGVGESDGRNGKVGLAFCFLDDTPVGKSSKLYKLWQHA
                     KAVAEWNHGEAHWYTPNLGFRNDDELLPVSLETNKCFDYPEIAIIIRLQIYGETFFLI
                     DFSMKQRDISIRGLGYKPDPNEDFLYESDMSKSELSELLSAVHHHEHLPKEYIEKKNK
                     EKTKLTTFNHSEAESSNWAYNAVQKLTSRAITKPTYF"
     gene            16586..19366
                     /locus_tag="PXB09_001086"
     CDS             16586..19366
                     /locus_tag="PXB09_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDL5233220.1"
                     /translation="MNAEQRVIVTPTFWGKFFGKIKSVELQQNKVIVTDKKNNITEHD
                     LGKTFDFPAIQKSFFGTKLFFKDDSTEVVLSKLAKKQTDSLLLEIEKVVASNIKVKVK
                     EGFQHFANLAENQYLRDSDIPTLNDRVRLSVLSYGDNKEHFQKYFDESLVKKIQYISS
                     LFPVNAINAQTIRREYEQHVLNHRKHFFDVIESNPLTEQQRLSVIRNNDINMVLAAAG
                     TGKTSVMVAKALDLIDSGACKSEDILILAYNRDAATELSERLQERAREANLDLENSPS
                     ISTFHALGRRIIKECGKSVHLSKFAEDPMKLDRWFNKWLEDYIKEDPDNLAKFIQLAY
                     QPIDPFQFKTKDEYDRYVNDNDYRTLQGERVRGYQELLIANWLFSHSVEYEYEPRYVS
                     KRRIEIGFDYKPDFSLGDGVYLEHFGIDRQGRTRADINAQEYNANIQRKRELHAEHNT
                     TLLETYHYNWVENTLYKRLEQLMNEQFIPLKPKSQQEILDALNESGIFKENKNRYLKC
                     LQAIRTERLDYQQILKRLTDAKIVYAKEYATLLMRIHDAYVKELRSANEIDFDDMILL
                     ATQLVKTGEFKPKWKHILVDEFQDISMARLELLKEIYTKGPRPIWTVVGDDWQSIYRF
                     SGGKLEVTTRFNDMVGSHTLSKLEKTYRYNNSIADTAGQFIMQNPEQYQKNVVTHTKV
                     ADSCVHLYDSHVVKDEKSEANISLKASAILKLIRQKAPEATVAILARYRYLLEDAKSV
                     IKDKNVKFWTFHGSKGLEADYCILLGFFQGKVGFPNQNKEEAVVEALLPMLDSFPHSE
                     ERRLFYVALTRAKKESYLIADANAPSEFINELLSPKYKIDIVSKRFQERYRTIFKCNE
                     CSTGYFVMKQGKFGQFYSCTSGEVCRSSPRICEKCGRPMKLREGKFGQFWGCSGYGIK
                     GDQCTNTRKYFM"
BASE COUNT         5840 a         3925 c         4136 g         5524 t
ORIGIN      
        1 cattttctga tggttagaac aatttttatt agtaatttgt ataaaaaaac gctaaatgta
       61 tctttcttta aaagagtcat atcaatgaat ctcccttgtc tttccgcaaa aaatctgtat
      121 aatttgaccg cttgttttct cttttgaaac aagttcgtta ccctcacctc gaacgagggt
      181 ttatttttta ctatcaacat ttagaggaaa ggttatggta accattcgtt taactcgtgg
      241 cggagctaaa aaacgcccat tttaccaaat cgtggtagtg gacagccgtt cacctcgtga
      301 tggtcgcttt atcgagcgta tcggtttctt caacccatta gcagcaggtc aagctgagcg
      361 tttacgctta gatgtggcta aagtagatgc ttgggttgct aaaggtgctg atttatcaga
      421 ccgtgttgct tctttagtaa aagaagctcg caaagcagct taatttttaa gccaaaatta
      481 aataagtagg tgagtatgag cgaacaaaag atcgaagttg tcggaaaatt aggttcaacc
      541 tatggtatcc gtggttggtt gcgtctctat tcatcgacag aacaaactga gagcattttc
      601 gactaccagc cgtggttttt aaaaattaaa ggtcagtggc agcaggtcga attagaaagc
      661 tggcgttatc atagcaatga tttgattgtt aaattgaaag gcactgaaga ccgtgaagcc
      721 gcacagttat taaccaacgc tgaaattggc gtggatttgt ctgtgtttcc tgaattggaa
      781 gagggagatt actattggca cgatttgatc ggctgttcgg tagtaaactt agagggctac
      841 acaatgggaa cagttgccga aatgatggaa acaggttcaa atgatgtgct tgtggtgcgt
      901 aataacggca aagatgcttt cggtaaacaa gaacgattaa ttccgttttt gtatgaacaa
      961 gtagttaaaa gagtagatct cgccaccaaa accattacgg tggagtggga cgctggtttc
     1021 taacctcagg tatgcggtga gctttggaaa acatttaagg cgttaaaatg tggattggta
     1081 ttatttcact gtttcctgaa atgtttaaag caattaccga tttcggggtg acaggacgtg
     1141 cagttaaaca aaatctactg caagttgaat gttggaatcc tcgtgatttt acattcgata
     1201 aacataaaac tgtagatgat cgcccttatg gcggtggtcc gggaatgttg atgatggtgc
     1261 aacctttgcg tgatgcgatt cacgcagcga aaaaggcggc attagcagta gaaggcggtg
     1321 aagctaaagt gatttatctt tcgccgcaag gacgtaaact cgatcaaaac ggtgtgcaaa
     1381 cactggcttc aaatcagaaa ctgattttaa tttgtggacg atatgaaggc gtggacgagc
     1441 gattgattca aacagaagtt gatgaagaat ggtcaatcgg tgattacgtt ctcacagggg
     1501 gggaattacc tgcaatgaca ttaattgatg cagttgcaag gtttgttccc ggggtattag
     1561 gcaaacaggc ttccgcgtta gaggattctt tcgcagaggg attattagat tgcccacatt
     1621 atacccgccc tgaagtatta gacggtatgc ctgttccgga agtgctgatg tctggacacc
     1681 atgaacaaat tcgtaaatgg cggttggaac aatcgctgga acgaacgtgg ttaagacgcc
     1741 ctgagctatt ggatagccta gctctgactg acgaacagcg tgtgttgtta gctaaaatta
     1801 aaaaacagca caaaatcagt taattctagg attatagaag gtttttaaaa tgagtaacat
     1861 catcaaacaa cttgaacaag aacagttaaa acaagactta cctagcttcc gtccgggtga
     1921 cacattagaa gttaaggtat gggtagtaga aggtagtaaa aaacgtttgc aagcgttcga
     1981 aggcgtggtt attgcaattc gtaaccgtgg cttgcactct gcattcactc tacgtaaagt
     2041 ttcaaatggc gtaggcgttg agcgtgtatt ccaaactcac tcacctgtaa ttgacagcat
     2101 ttctgttaaa cgtaaaggtg cggtacgtaa agctaaactt tactacttac gtgagcgttc
     2161 tggtaaatct gcacgtatca aagagcgtct tggcgactaa ttgctacaaa acagtgaaat
     2221 gcacaaaagc cttgaggaaa ctcaaggctt ttgctttttg tacttacaag cagttatttt
     2281 tcctcaatga tttacaaatc ttgctttctt ttttgttata atgttaacaa gataacatta
     2341 atgataggtg tcgatatgaa acaattaagt attagattgc cagacgatga atttactttt
     2401 attaaaacat ttgcttctgc tcataaactg actttacaaa attttgtgat gtccgcaatc
     2461 caagctaaag ttgcagaaat gtctgctaaa aataaaatat ctgaagaaag taacattcat
     2521 caacctcttt ctaaagatga aaaaataatg ctaaatgagg caaaagtatt ttattctgct
     2581 cgttcgcatt taaaggcaga aaatgtgatt cttccgagtg attttatgga gcaaattaaa
     2641 tcaggctgtg gagcagaaaa aatggcagaa atgatgggat ataccaaaga agattgggag
     2701 tcaatgaagt aatatggggc agattacatt tagtaatatt ttcacaaaag tgatttttga
     2761 gaatgtgctt tctgcttcaa ctaaagagaa aataaaacaa atgctttttc agtctgtggt
     2821 tgcattacct cctctccatt cagaaagaaa aatgatttta cagttgaaaa agcaaaaaat
     2881 taccattttt tatcaagtta ttgaggaaca atctgtgcaa atcctcgctt atcaatttgg
     2941 tggaactgat aaattgacag gtgtgtctaa agctcacttt aaaacactag atgccatttt
     3001 tcaaatgacg gatgaagaga aagaaggaaa attctaatgt aagcggttat ttttccatat
     3061 ttttttgcaa ataacgtttc tcaaattttg cttgatggcg ttcaagcact tccgtcatcg
     3121 aaatgccata tttatcggct aatacaaaaa gattatccat cacatcgcct aactcttcga
     3181 ttaagttatc tcgtttttgc tgttgtgaag cttcggtttc gtccggtcgt tcacgcccga
     3241 tttcaatcgc tcttactgca caagccactt cgccgatttc ttctgctaga taagtcaccc
     3301 gcataaaagg gcttcgttca taccaacctt gttgttggta aaactggcga acccattgtt
     3361 gatattgttc aatttgcatt ttatttctga ttcaaaaagt agggacgaaa aatttttcgc
     3421 ccttttataa gaaaatgtat cagggcaaat gatgatttgc ccctaggagt gttactctgc
     3481 ctcagagaga ataatccagc cactatccag ccagtcgcaa atggtgtcta gcattagctc
     3541 cagctccgct tggtcttgca ctttggaggc aagtttgttc cacgaaatcg aatctccatt
     3601 ggcgatacga atcagtaatg ccatttctgc ttcgtttaac tcatcaatcc actcgccatt
     3661 tacataaacc cgttgagggt tctcggtgta gaggattttt acatttgcat cttgctgtaa
     3721 ccagccgccg gcttcgagaa tttcttgcac ttcgtcaggg taatattcat tgtcagtttg
     3781 caataattca taacggcggg agcttgccgc agtggcaaca ctgtgagtga gtaactcatc
     3841 gaactgttcg gaattttgga gcaagtcgat taactgatgt ttaaacattt tcaccatttt
     3901 cggatcaagc aacgcattcg gctgttcatt cggcgttaag cggaacggaa gatgaaattc
     3961 cgatgaatta atgttgtcgg cttgttgttc gatggttttg cagagatttt ccagtaaatc
     4021 ggtcgcattt ggataacgta aaccaaaaga gaaagttaaa ccttgctcgc tttcggaaac
     4081 accatagtga gccattcgag acggcacata aagcacatca cccgggttca ttacctcgtc
     4141 cattaccagt tcgcccatat catcaaaaat gcggatcggt tggtttggtt tgaattcggt
     4201 gcttggatcg caccatttgc ctaattgcca acgacgttgc ccatagcctt gcaccaagaa
     4261 cacatcgtac tcatcataat gtttgccgac agtgccgttg agcggtgagc aagaaaccat
     4321 aatgtcatca cgttgccatt gcgggataaa accaaaagcc tgccaaagct cgcctagctc
     4381 aggagaccat tgctcgaggt tttgcaccat tacagaccat tgtacaggta actcttccaa
     4441 atcttcctca acaagcgggc tggatttaac agaccatttc tcgttttcgc attgaatcag
     4501 gcgtgcagtg acttcttcct ctaatgccag ttctaaaata tcttccggct caaacaatcc
     4561 gacaatttgg ggtaagccgt tacgaattaa tagcggtcgt ttttgccaat attctcgcaa
     4621 aaaggtttca gggctgatat tttcaggtaa gcagaatgga atgttcataa tggctccttg
     4681 ctacgtgctt ctttgagatt actgatattc tacccgagaa atcaggaaaa acgggaaatt
     4741 ttttatgatt tagcgacatc attcacattt tgaagaggaa ataatgaaaa aggcgaacat
     4801 tgttcgcctt tgaaatttat tttaaaccga gttttttctc gagatagtgg atattggtgc
     4861 cacctttgcg gaattcttta tccgcaagaa tttgagtatg taaaggaata ttggttttaa
     4921 tgccttccac aatggtttcg gaaagggcat tttccatccg gcgaatcgca atatcacgat
     4981 tttcagcaaa ggtaatcaat ttaccaatca ttgaatcgta atgtggcggc acgctatagc
     5041 ctgagtaaat atgtgaatcc caacgcacac ctaaaccacc cggaacgtgt aaacgggtaa
     5101 ttttacccgg cgatggcaag aaggtgtttg gatcttctgc gttgatacgg cactcaatgg
     5161 cgtgaccttt cactttaata tcatcttgtg tgatcgaaag tggtaagccg gctgccacac
     5221 gcagttgctc ttttaccaag tccacaccgg taatcatttc ggttacaggg tgttctacct
     5281 gtaagcgggt gttcatttca atgaagtaaa actcgccgtt ttcatataag aactcaaaag
     5341 tacctgcacc acggtagcca atttcacggc aggcattggc acaacgctcc ccaataaatt
     5401 gacgcaattc aggtgtaata ccctgagcag gtgcttcttc caccactttt tggtggcgac
     5461 gttgcattga acagtcacgc tctgctaaat aaaccgcatt accgtgagta tcggcaagta
     5521 cttggatttc aatatggcgt ggattttcta aatatttctc catatacacc atatcgttat
     5581 taaatgccgc tttcgcttcg gctttcgtca ttgcgataga ttcttccaaa tctttctcgt
     5641 gatgaaccac acgcatacca cgaccgccac caccacctga tgctttgatg atcaccgggt
     5701 agccgatacg tttagcgatt tctttatttt tcttcggatc gttaccaacc ggaccgtcag
     5761 aacccggtac gcaaggcacg ccggcttttt tcattgcatt gatagcagag actttatcgc
     5821 ccattaagcg aatcacatca gccgttggac caataaagat aaagcctgat ttctcaactt
     5881 gttcggcaaa gtttgcgttt tcagataaga aaccgtagcc cggatgaata gcatcggcat
     5941 tcgttacttc ggcagcggca ataatcatcg ggatatttaa atagcttttt accgatggag
     6001 caggaccgat acaaatggtt tcatcggcta atttaacgtg ttttaattca cggtcggcag
     6061 ttgaatgcac tgcaaccgtt ttaatgccca attctttaca agcacgcaaa atacgcaggg
     6121 caatttcacc acggtttgcg ataacaactt tttctaacat agggaaattc cttgtgttct
     6181 agaaaatgta gggcgtgttg cacacgcccg ttggataatt taaggaagag cttattcaat
     6241 gatgaataat ttttggtcga attctaccgg ttcgccatca ttaactaaga tttcttttac
     6301 cacaccggct ttgtctgact cgatacggtt catcattttc attgcttcta caatacataa
     6361 cgtatcaccg attttcacgg tttgacccac ttcaacgaac ggttttgcat ctgggcttgg
     6421 gctacggtag aaagtcccca ccattggtga aagcactgcg tggccactcg tttctgcggc
     6481 ttttggtgct tcagccggag ctgcaacagg tactgtcgaa gctacttgag gtgccgctgg
     6541 tgcaacaaca ggagctgctg catattgaac tgcagctggt gcaacagctg gagcagcacg
     6601 gctaatacgc accgtacctt cttcttcaga cacttctaac tcggtaatgc cagattcttc
     6661 aactaattca ataagttttt tgattttgcg aatatccata ataagattcc gtatgtgatt
     6721 aaataaaata aaaaagagaa ctccacattt ggggtataaa ttcaaatgta gagttaaaaa
     6781 atgctgggcg tagaatacct gaatttcgct aattttgcga ataaaatctg ataattttgg
     6841 cgaaaatgga cgattttagc attcatcgta ccagttagga tttttggaaa atggtgactc
     6901 acaagcgatt gaaaattgcc aattttttgt aaaaaacaac cgcttgtcag attatttcaa
     6961 taaatcttca tttttcttgt aattccactt gctaccgggc ttgtcgatat actgaaaata
     7021 ttcgttggta aaagtacctt gagcacaagt tactttgtct cggcggaaat ttacttcttt
     7081 atcaccaatg gcattattta gggtgtcagg accggtcata acaaacacgc caccttcaat
     7141 ccgacgattc tcaatattgc tgataatcag ctcaagggtg tcttttagaa tccaatttcc
     7201 agcttccgaa gccaagaaaa agttggtgta tttatcacgg cgtttaatta acacttcgct
     7261 atcattttcg ccaataattt tagagagtgg gtaaaccaaa tgcccgtcaa tatcaatata
     7321 aatgccacct tctcggagca aagtaaaaat tcgccaaaaa tcagcttgtg ccgcaccatc
     7381 ggttaatttg ctataggcgt taaaggtgcg ttcatcggcg ttggccttga tgtatgcctc
     7441 tcgttcttct gtgctaacgt agcgataatc gtagctcaat gacattaggc ggttaaacag
     7501 ataattcgca tacattggca aggtgacttt gttagaataa ttcgtttgcc aaatggtttt
     7561 ggtaattttg ctcggaatgc ttgattggat ttttgccggg ctatattccg gaatggtgaa
     7621 acgttttttc ggaaaaagtg catggaacgg ataactcaat attttgacga tattaccgaa
     7681 taaacggaag actccgttac agatcacaat aaattgttca tttttaacag ccattttatt
     7741 accttatgct tttaagtgtg aaattgcaaa atccaacgca tattcatagc cttttgcccc
     7801 taaaccgcaa ataacgcctt ttgcaatatc acttagatag gagtgatggc gaaaaggttc
     7861 acggctatga acgttagaca aatgcacctc aacaaacgga atcgacacac tcaataacgc
     7921 atcacgaatt gccacgctgg tgtgagtaaa tgccccgggg ttaataataa taaaatcggt
     7981 atgctgaaag gcttggtgaa tacggttgat aatcggctct tcaccgttgg cttgaaagct
     8041 ctccagctca acatcttggg ccgcagccaa tttttttaag tggttttcaa tatccgccaa
     8101 agtttgcgaa ccgtaaattt gtggctcacg tttgcccaac atatttaaat tcgggccgtt
     8161 aaggagaagg atttttttca tatttactta ttcaacttgt aattcataat taagccattc
     8221 acggttttct ttcgccccca agcgttgata aaaacgaata ccaccgtcat tccaaggatt
     8281 ttattgtctt acaatgatgt gccttcgcct catttttcaa ggcttgcatt aacgcctctc
     8341 ccactttctg attccgagca gtttcatcaa cataaagctc tttcatataa atagcggggc
     8401 ggttttgggc agtgtaagga agaaaataat aaaccaatat gccgataatg ttagacgcat
     8461 tttcagccac taaacagtaa aaatcgggtg ggcttttgcg aaagccggat tccattacaa
     8521 cttcaggagt aatcgcaaaa gaatcgatat agtgctcaaa cacagccagt ttttgcatca
     8581 gagggaacac ttggtgggta tcttgttcga ccattttgcg gattgtaaat gccataaaat
     8641 tccttacaag cggtaaaaaa atccctcact tttgcaaagc gagggaggtt ttaattattc
     8701 gtcaatagaa cgtaataagt cgtttaagcc cactttgctt aaggttttct catccacttt
     8761 tttcacaatc accgcacagt agaggttgtg tgaaccatct tttgatggaa gcgagcctga
     8821 aaccacaaca gagcctgccg gcacacggcc gtaatgtact tcgccggttt cacggtcgta
     8881 aattttggta gattgaccga taaacacgcc cattgagatc acgcagttat cttcgacaat
     8941 cacgccttct acgatttcag aacgtgcacc gataaagcag ttgtcgccga tgatggttgg
     9001 gttcgcttgt aatggctcta acacaccacc gatgcccacg ccaccagaaa ggtgaacatt
     9061 tttaccgatt tgcgcacaag aacccactgt tacccaagtg tccaccattg tgccttcgcc
     9121 aacgtatgca ccgatgttca cgaaagatgg cattaacacc acgtttttct cgatatgtga
     9181 acctttacgc accaccgcac ccggcacggc acgaatgcca tctgctttga attgctcttc
     9241 ggtgtagttg ccgtatttgg ttggcacttt gtcgtagaat ttggtttctg caccgtcgat
     9301 gatttcattg tcggcaatac ggaatgaaag taataccgct tttttcaccc attggtttac
     9361 tacccactcg ccatcttttt tctcggcaac acgcagtgaa ccgttgtcta atcctgcgat
     9421 cacctcttct actgctgctt tggtttcagc atcaacggtt ttcggagtaa tttccgcacg
     9481 gcgttcaaat gccgcttcaa taatagcttg taaagacatt gttgtgttcc ttcaatatat
     9541 aaattaaaac agaaaattcg gctcactttt taacatagaa aggcgtttat ttccacaaga
     9601 aaaaacatat cgcagaaatt tagtttataa ttccaagcca cttatttgat acaagcggtg
     9661 atttttgtgg aaaattttgc aaatctgctt accggtaaaa cgcgtgagca tttagtgccg
     9721 ttgccgaacg ctctttcgga taaacattac cttcagcctc aggtggttga ggcttttttg
     9781 acgttgcagc atgctgcaaa acaagccggc tttaatttac agcctgccag tacttttcgt
     9841 gattttgaac gccaaaaagg gatttggaat gcgaagttta ggggtgagcg taaggttcac
     9901 gatgataacg gggttgcgat tgatatggcg gcgttatcgg atcttgaaaa gtgcaaagca
     9961 atgttgagat ggtctgcggt gccgggggca agtcggcatc attggggaac ggaaattgat
    10021 atttttgacc ctgatttatt gccggaaaat acgcctttat tgcttgagcc gtgggaatat
    10081 ttggaaggtg gctattttgc cgatttaacc aagtggttac acgttaatgc ggaaacattt
    10141 ggcttttatt tcccgtttga cggtaaacat tctcgagtgg gctttgagcc gtggcacatt
    10201 agctatcgcc cgatttcaaa tgaatatgag caacgcttta acgatgaaat cttaaaagct
    10261 gcgtggcaag atgaagaagt ggcgggtaag gaatgcttac ttgaacattt tgaagaatta
    10321 ctaaaatgat ccaattaatt aacgaaaccc aacaacacga caaattccgc caaatttgcg
    10381 acaaatggca gctggttgaa gataaatcca gcccgttagc cttagtgcta acggaggaac
    10441 gattggaact acgcaaatta gacgaaccca agctcggggc gattgcagtg aattttgtgg
    10501 acggtacgat ggcacatcgg cgtaaattcg gtggtgggcg aggtgaagcc gttgcgaaag
    10561 cggtcggcat taaaggggat tatttgccaa ctgtgattga tgcgacagcc ggtttagggc
    10621 gagatgcttt tgtattagca gcggttggtt gtaaagtgct gttagtggaa cgcaatccaa
    10681 ttgtcgctgc cttgttggaa gatggtttaa accgagctta tcaagatgtg gaaatcggca
    10741 gttttatgca agaaagaatg atcttagccg atgttcgaga catttctcag ctagatccac
    10801 aatcccaaat ggctgaggta gtgtatttag atccgatgta tccgcacaaa caaaaaagtg
    10861 cgttggtgaa aaaagaaatg cgggtgtttc aacatttagt tggggcagat ttagattcgg
    10921 acagcttttt cttaccggca aaaggattgg caaaaaaacg tgtggtagtg aagcgtccgg
    10981 actatgcccc gtttttagcg gagcaaaagc ctgatttttc acacaccacc aaaaatcacc
    11041 gttttgatgt ttatctttct cacctgaaaa atgattaaag gtgggtcatg cgataggcaa
    11101 gcggttattt ttacagtaaa atttacaaat tatgttatcg tttatttata tttaaaaagg
    11161 cggttatcgt gccacaacgt gattatgtcg ctcgttccaa cgagaaaaaa agtaaaaaaa
    11221 atcaaaaaga aagtaatgtt aaaaagattt taatgcggat tatcggggta attttattct
    11281 tcggtattgg tttatggttt ttgaaatcca gtgcacctgt accaacagtt ccgtcagcac
    11341 cgcagcctgc taattcacag actaaaagcg aattaccaag tcgaccggaa gagacgtgga
    11401 gctatattcg tgatttagaa acccgtacgg taattaccga taatagccaa acttcacaag
    11461 aacgtttggc acaattaacg gcggaacaaa agcagcaaat tgaagaaaga cgcaaacaag
    11521 aagaagcacg cttagccgct gagcaagctc aacaaaagcc tgcgaccgat gtatctgcta
    11581 cagaattggc tccgaaaaca gaggaagtta agtcgttaac ggaagaagaa ttagcagcaa
    11641 aaaaagcaca ggagcaagct ttagcacaaa agcaagcgga agagaaacgc agacaagcag
    11701 agcttaaaaa acagcaggaa gcgaaaaaag agcagccggc taaaattgta gcaagtgctg
    11761 caacactggc agataaagct gcaaatcagg cgggtaaatt tgggttacag tgcggtgcat
    11821 ttaaaaataa agcccaagcc gaaaatatgc aagcaagatt ggcaatggca ggttttaacg
    11881 cccgtatcgc aagcagtgcc gattggaacc gtgtttttgt cggcccgata ggtgacagag
    11941 cggcaacttc cagagctcaa tccaatgcac gcagtgtagc ggaatgtgtg attgtggcga
    12001 tgtaaaattg attgaaatat tgaagagagc tataggctct ctttttttat atcccaatcg
    12061 catatttcaa ggcttgcttt ttgatgggtg acactttatc agccaatact aaaccgacat
    12121 tgcgggcaat tttgagcggt aataaatcgg tcttaaacgc tttataaaac acgtccatgc
    12181 ctgtttgcat cagtaaatta tccggtttac gtttttgctc atagcgttga agcacctgct
    12241 cacttgcaaa atttttgcct tttttgaccg cttgttcgat cacctcaagc aaggttttaa
    12301 catctttaaa gcctaaattt acaccttgtc cggcaagcgg attaatggtg tgagccgcat
    12361 cgccgactaa taccaccccg ttttgcacat agtgctgagc gtgctggcgg gttagcggga
    12421 aagcccctga agcctgcacc tgaatgttgc ctaattctgc gttgagccgg cttgggaaat
    12481 gttgctcaat cgcaactccc agcttttctg ctggaagcat tttcagttcg gcaatttttt
    12541 gtggtgaatc gtaccaaaca acgcagccgt gattgccgga aagcggtaaa aaggctcgag
    12601 ggccggttgg atagaattgt tgccaagtgc cgcttggagc aggtttttcg gtggtaacgg
    12661 tggcgagtaa acagtgttgg cgatattgcc aagcggttaa accaatgccc gcccattggc
    12721 gaacctgtga atttgcaccg tctgcggcaa tcagcagtgg ggcagcaaag gtgttgccat
    12781 caaccgtcac ttcccaatac tcgcccgctt tatttgcaaa aatttgctca aatccgaccg
    12841 cttgtaggca gtttggatat tgctttaatt gctcccataa cgcaatttga ataacgttgt
    12901 tttcgaccat atcgccgagc ttttccaaac ccaaatcagc tgccgaaaaa agagtgttga
    12961 atccatcaat ttcccaggtt tcgagctggg tataaggggt gcttctcatt gcaacaattt
    13021 gctcccacac gcccaatttt tctaacagtt gaatcgagcc catactaatg gcggaaattc
    13081 gcaaatcgta gtctgaatca ggattaaagg tcggcagagg gtttttctcc aacaaggcta
    13141 aacgcagccc ctgttttgct aagcctagag ctgttgctgc cccaatcata ccgccaccga
    13201 ttacaatcat atctaattca gttttcattt tttcttcctt tttagttagg caaaatactg
    13261 ctaaaacgcc ttgaattgta gtgcatttca gattaggatc aaaccgattt atctatttat
    13321 ctaaggagcg ttttatgtct tgcaaaactc atgcaaacca cgagcacgaa cacggcgaag
    13381 gctgtggtca tactgctatt aaacataacg accatatcga ctatttacac gatgggcatt
    13441 tacaccacaa caaacacggc gatcactatg acgaacacgt tttagaagtg aatgaaacca
    13501 acccggcaga ctgtaatgcc gcccattgct gcggcgacca cgttcatggt gaggtttgcg
    13561 gacacgaagc tgtgccgcac ggcgatcata tcgactacat cgtgaatggg cgtttgcacc
    13621 accaacacgg cgaccactgc gatgaccacg ggccggttga aattgtgaaa taagattttt
    13681 gatgggaggt tttagcctcc cattattatt tttgcgatct cgctcgaaaa attgaacatt
    13741 cctgctaccc ctcttccgat tttcctttta tgctctcggt attgatttct aataccgaaa
    13801 tgtgatgacc ttagcgattg tttacagccg agcctccatt ggcgttgaag ccccgttggt
    13861 gacgattgaa gtgcatatta gcaacggaca accaaaatta accattgtcg gcttgcccga
    13921 agccacagtg aaagaggctg gtgatcgtgt gcggagtgcg ttgctgaacg ctaattttat
    13981 ctatccgcca caacggatca cgattaatct tgctccggca gatttaccca aagaaggcgg
    14041 acgttttgac ttgccgattg cgattggcat tctggcagcc tcagggcaaa ttgattctga
    14101 tttattaacg cagttcgagt ttttgggcga gttggcactg acagggcatt tgcgaggagt
    14161 gcacggcacg attccggcag tgatttctgc cgataaagcc aaacggcaga tgatcttagc
    14221 caagcaaaat gcgaatgagg catcgcttgt ttccaatgcc accacctact ttgccggctc
    14281 gttgttggag gtggtaaata tgctcaacaa acgggataaa ctgccgattt gtcagcacat
    14341 ttcgcaacat tctgccgaaa ttcgaccgct tgtcagccga gatcttactg atattatcgg
    14401 gcaacaacac gccaagcgag ccttaatgat tgccgctgcc gggcaacata atttgctgtt
    14461 tctcggacca ccgggaacgg gtaaaacaat gttggcaagc cggctggcgg atttactgcc
    14521 ggaaatgacc gatgaggagg cgattgaaac cgcctcggtg accagccttg tgcaaaatga
    14581 gctgaatttt cagaactgga aacaacgccc gtttcgttcg ccccatcaca gtgcatcaat
    14641 ggtggcatta gtgggaggtg gctgtgaaaa ctagaaataa atgtcaaaaa caagaaataa
    14701 atgtcacaaa tctttctcta atttcgctat aattcgatca tcaaaacttt aaggggaaat
    14761 ccgttatgtt ctacctcaat aacgacaatt tcaaacgaga accttatcgt ggatattgtc
    14821 cgagtcacct tgaaaagctt tttactaaac cacaccttga tattagaggt aacggttatt
    14881 attaccctga caatgaatat gttgtagctt ggtatgaatc ggacttcatt ttcaaatcaa
    14941 gaaaagctca agcacatgca aaagtaaagc ttgttaattt aacttgcccc aaatacactg
    15001 gcaaaaacag tgctgaatat ttaagcgttt tgtatatctc cgttcccctt aattatctac
    15061 attatttcac tatcggcagt atctggaaag gcggtgtcgc caaagagcag tttgctctcg
    15121 aagaatttta cattacggtt gaagctgaaa atcaagatgg taaacgagaa aacctctcaa
    15181 tcgtttcatt cggtgagagt gaggaaaacg gtttagagaa accatttgat tacacaatct
    15241 acactatccc cacagaatat cacaactacg gtgatgacct aaaccgacta ctttccatct
    15301 cttaccaaaa tcaaaaattc attatccatc cgctacatat ttttatgatg cactacgggt
    15361 actctacgga catcaagcgt atcttggcaa catacccact tgacgaggta agagaacgcc
    15421 tatttataga taaggtcgtt gagaattttg atgtagagcg ttatgtcgtt ttaccgaaat
    15481 actttgtaaa aaaagatgcg attttcctct atcacttcaa atatgacgaa gagactacgg
    15541 gaacaagggt aaaaaagctt gtaagccagt ttaggttaaa tattcacaat caaacacatc
    15601 caatagaaat agatttttgg cacacgcaaa aggttgaatt gaaaatccgt ggtgttcgac
    15661 ttggaaatgc tgtgttatgc gcagaaatta tcggtcttaa tcagcccgaa ggcgaagata
    15721 ttacgctagt gctatctcaa tcgaaaagag aaaaatcggg taataaaacc gaggaacaaa
    15781 ataacgaggt aaataacgtt cctattacca gagtttatac acgagaacct gaattggatg
    15841 agttaccact caccgataac tccccagata atcgaacagt cgaatacaac aagcgacaat
    15901 ttgaactctt gggccgtcaa cgccaaatca gagcgctcaa gaaagcacgc gaagagagta
    15961 atcagaaaat gaaagccttg actccagatg agatagactc actgggtgta ggtgaatcag
    16021 atggccgaaa cggtaaggtt ggactcgctt tctgtttcct tgatgataca cctgttggca
    16081 aaagctccaa actatacaaa ttatggcagc acgcgaaggc tgttgcggaa tggaatcacg
    16141 gtgaggcgca ctggtacacg cctaatctcg gttttagaaa tgacgatgaa ctccttcccg
    16201 tttccttaga aaccaacaaa tgtttcgact accctgaaat cgcgataatt atccgcctcc
    16261 aaatatacgg agaaacattt ttcctgattg atttctcaat gaagcaaaga gatataagca
    16321 ttcgtggctt agggtataaa cccgatccaa acgaagattt tctctatgaa agtgatatga
    16381 gcaaaagcga attatccgaa ttattgtccg cagttcatca tcatgaacat ctgccaaaag
    16441 agtacataga gaaaaagaac aaagaaaaaa ccaaactcac tacatttaac catagcgaag
    16501 ccgaaagtag taactgggct tataacgcgg tgcaaaaatt aacttcaagg gcaattacta
    16561 agccgacata tttttaatta tttttatgaa tgcagaacaa cgtgtaattg ttactccgac
    16621 attttggggt aaattttttg gaaaaattaa aagtgttgaa cttcaacaaa acaaagttat
    16681 cgtaactgac aaaaagaata atataactga acatgattta ggaaaaactt ttgactttcc
    16741 agctatccag aagtctttct ttggtactaa attatttttt aaagacgata gcacagaagt
    16801 tgttttatca aaacttgcga aaaaacaaac tgatagtcta ttacttgaaa tcgaaaaagt
    16861 agttgcatct aatattaaag tgaaagtaaa agagggtttt caacactttg caaatttagc
    16921 cgaaaatcaa tatctcagag attccgacat tcctacatta aatgatcgtg taagattgtc
    16981 agtgctttcc tatggggata acaaagaaca ttttcaaaaa tactttgatg aaagtttggt
    17041 taagaaaatt caatatatct cttcactttt tcctgtaaat gccataaatg ctcaaacaat
    17101 tcgaagagaa tacgagcaac atgttttaaa tcatcgcaag catttctttg atgtcattga
    17161 atctaatccg cttactgagc aacaaagatt gtcagtcatt cggaacaacg acatcaatat
    17221 ggttcttgct gccgcgggga caggaaaaac gtctgtaatg gtcgcaaaag cattggactt
    17281 aattgattct ggtgcttgta aaagcgaaga tattttgatt cttgcataca accgcgatgc
    17341 agcaaccgaa ctatccgaac gcttacaaga acgtgcacga gaagccaatt tagatctgga
    17401 aaatagccct agcatctcga ctttccatgc gcttggccga agaattatta aagaatgtgg
    17461 aaaatcagtc cacttgtcaa aatttgccga agatccgatg aaattagata gatggttcaa
    17521 caaatggcta gaggactaca tcaaagaaga tcctgataat cttgcaaaat tcattcaact
    17581 tgcataccaa cctatcgatc cattccaatt caaaacgaaa gacgaatacg atagatatgt
    17641 aaatgacaat gactatcgaa ccttacaagg cgaacgcgtt cgtggttatc aagagttatt
    17701 gatcgcgaac tggcttttta gccacagcgt agaatatgag tatgaaccaa ggtatgtatc
    17761 aaaacgccgt atcgagattg gttttgacta caaacccgat ttctctttgg gtgatggtgt
    17821 ttaccttgaa catttcggca ttgaccgaca aggtagaact cgcgcagata ttaacgcgca
    17881 ggaatataat gccaatatcc aaagaaaacg tgagttacac gccgaacata atacaacatt
    17941 actggagaca taccactaca actgggtgga aaatacgtta tataaacgac tagagcaatt
    18001 gatgaatgaa cagttcattc ctctgaagcc aaaatcacaa caagagattt tagatgcact
    18061 caatgaatca ggaatcttca aagaaaacaa aaatcgctat ttgaagtgcc ttcaagctat
    18121 tcgtacagag cgattagact atcaacaaat cttaaaacgt ctaaccgatg cgaaaattgt
    18181 ctatgctaaa gaatatgcga cattgctcat gcgtattcat gatgcctacg ttaaagaact
    18241 acgtagcgca aatgaaatcg actttgacga tatgattttg ttggctactc aactggtgaa
    18301 aacaggtgag tttaaaccta aatggaaaca tattttagtc gatgaatttc aagatatttc
    18361 tatggctcga ttggagttat tgaaagaaat ttatactaaa gggcctcgac cgatttggac
    18421 tgttgttgga gatgactggc aatcaatcta tcgtttctct ggcggtaaac tagaagttac
    18481 tacgcgattt aatgatatgg tcggctcaca cacgctaagt aaactagaaa aaacctaccg
    18541 ctataacaat agtattgctg acacagcagg tcaattcatt atgcaaaatc ctgagcagta
    18601 tcagaaaaat gttgtaacgc atacaaaggt cgctgattct tgtgttcatt tgtatgactc
    18661 tcatgtcgta aaggatgaaa aatcagaagc caatatcagt ttaaaagcct cagcaatatt
    18721 aaaactgata cgtcaaaaag cacctgaagc cactgtcgca attttggcta gataccgtta
    18781 ccttttagaa gatgcaaaaa gtgtaatcaa agataagaat gttaaatttt ggacgttcca
    18841 cggctcaaaa gggttggaag cagattactg cattttactt ggtttcttcc aaggaaaagt
    18901 cggatttccc aaccaaaata aagaagaagc cgttgtagaa gcattgcttc ctatgctaga
    18961 cagttttcca cactcagaag aacgtaggtt attttatgtg gcattaacgc gtgcgaaaaa
    19021 agaaagttat ttgatcgcag atgcgaacgc gccatcagaa tttatcaatg aattattatc
    19081 accgaaatac aagatagata ttgtgtcaaa acgattccaa gaacgttatc ggacaatctt
    19141 taaatgtaat gaatgtagca ctggctattt cgtgatgaaa caaggtaaat ttggtcagtt
    19201 ctattcttgt acatcagggg aagtatgccg ctcttcgcca cggatttgtg aaaaatgtgg
    19261 ccgtcctatg aagctgcgag aaggtaaatt tggtcagttt tggggatgct caggatatgg
    19321 aatcaaaggc gatcaatgta cgaatactcg taagtatttt atgtaatata ttattttgga
    19381 ggattttgtg gatttatttg aatcaaaaaa acaattaata gagtt
//
LOCUS       DANLTI010000040        19364 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.040, whole genome shotgun sequence.
ACCESSION   DANLTI010000040 DANLTI010000000
VERSION     DANLTI010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19364
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.040"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(53..1093)
                     /locus_tag="PXB09_001087"
     CDS             complement(53..1093)
                     /locus_tag="PXB09_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5233221.1"
                     /translation="MQTTLSPQQIAKKHRTIEKKRSFLLLFFLLICLLSLIFDIMTGP
                     SLLPFNEVWKALFQLGEIEETTKVIVYELRLPMAIMALVVGAALGVGGAEIQTLLNNP
                     MASPYTLGLAAAAGFGASIVIAFGGFGLPTEISVPVGAFVMTLFSSAILFAFSSLGRF
                     SSAILVLVGIALLFLFQSLLSLVQFISAPEVSQQILFWLFGNLTKATWQTISIAFGVT
                     TVCILLLFKDAWKLTALRLGEARALSLGINLTWLRMKTLLIVSVMTATCISFVGIIGF
                     IGLVAPHIARMLLGEDQRFFLPGSMLVGAAFLSMSSVLSKSLVPGALFPVGIITALVG
                     VQFFFWIVLAKR"
     gene            complement(1182..1772)
                     /locus_tag="PXB09_001088"
     CDS             complement(1182..1772)
                     /locus_tag="PXB09_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein phosphodiesterase"
                     /protein_id="HDL5233222.1"
                     /translation="MNFLTHSLISLEIDTQTKQQTLYGNFAGDFYKGLIPHLNLADNL
                     KSGVVLHRSIDKISDRPDSLTTQLLQGTFGRYKGIVSDIMIDHFLAKHFQRLFAKDLN
                     EVQAQIFQQIEQQRTIFPEQFVPMFNWLQSRKALTHYADLDFLEQVFLGMSSRVKKGE
                     ILRNAVTEIWQNYTLLEEAAIQEFFTVKDRATRELS"
     gene            complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXB09_001089"
     CDS             complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXB09_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HDL5233223.1"
                     /translation="MVVDGNGSGKTTFSLALQGKISLYSGDYGNSFQHIQLLSFEQQQ
                     KMLEQIFKDRNNDSVSPDDFGLTARQVILNGSPKEALCEEYAHKLHIQHLLERPFMHL
                     STGESRKVLFCQMLVSEPDLFILDEPFEGLDQQSVQYWQQLIAELQSKMALVLIVNRF
                     NDIPDAANHIELLDNLSLILQGERAEIEQQAVYSQLKFAEENVNVPLPDSAAPLLSLP
                     ENINPFELENVNIQYGEKKILDNLSWTVQPKQHWWIKGPNGAGKSTLLSIITGDHPQS
                     YANKVRLFGKQRGSGETIWDIKKNIGYVSSQLHMDYRVNCSAMEVILSGFFDSIGVYQ
                     QVPNALQLKAMEWLERLNLSNVAKKPFRSLSWGQQRLLLITRAMVKHPSILILDEPLQ
                     GLDGINRKLVKQFIEQLVTNSQTQLLFVSHQDSDAPNCITHLFEFVPKGETNEFGFEY
                     HQTALGA"
     gene            complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXB09_001090"
     CDS             complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXB09_001090"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDL5233224.1"
                     /translation="MSKLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGK
                     KLQASPVKQLAEAHNIPVYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAP
                     KYGCLNVHGSLLPRWRGAAPIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEP
                     NETSASLYAKLAELAPLALLEVLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQL
                     PAVQLERNIRAFNPWPFSFLTLTVDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQ
                     IATQQGVLNITQLQPAGKKPMSVQDFLNGRADWFVSGTQLS"
     gene            4332..4943
                     /locus_tag="PXB09_001091"
     CDS             4332..4943
                     /locus_tag="PXB09_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDL5233225.1"
                     /translation="MEFFIPKADTIFEEEIKKSRFITYLRHTEGMEQAKAFWQELKIQ
                     HPHARHWCWATVAGLPNDSQQYGFSDDGEPSGTAGKPMLNYLLGSGLGEITAVVVRYY
                     GGIQLGTGGLVKAYGNGVQQALLQLERIRKVLRKNYRLQCEYEQFNTISHLISEKDIV
                     IVEQLFSDKVDLLLAFNPSEVEAFADELTQRFSGKLALIKEEI"
     gene            4947..6431
                     /locus_tag="PXB09_001092"
     CDS             4947..6431
                     /locus_tag="PXB09_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDL5233226.1"
                     /translation="MQFFSIIRIVGILVMCFSFTMLVPATVALIYGDGGGRAFLEAFA
                     LNFMVGTLLWWLCRDNKNELRSREGFLIVVLFWVVLGLLGAVPFIILENPDLNVAESI
                     FESFSGLTTTGATVITGLDSLPKAILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGMQL
                     YRAEMPGPLKEQKMRPRIAETAKALWLIYLSLTILCAVAFWLAGMTVFDAISHSFSTV
                     SIGGFSTHDASIGYFNNAAISYITVFFLLLSACNFALHFAVIDRIRDAQSRKKGGILS
                     RLYWGDYEFRFFLMVQLGLFLVCTLVLVGYGYFDNTSVTIEQALFQSVSISTTAGFTT
                     NDFSQWSSFLPTLLVLSSFIGGCAGSTGGGLKVIRVLLLYLQSKREIHRYIHPNVIQP
                     IKLGNHVLSERVVDGIWAFFSAYFFVFVICWLATIACGMETFDALNAVIASLNNLGPA
                     LGSVSSNFTQVPDSAKLVLTFAMVCGRLEVFTLLVILSPVFWKD"
     gene            6432..6959
                     /gene="hemG"
                     /locus_tag="PXB09_001093"
     CDS             6432..6959
                     /gene="hemG"
                     /locus_tag="PXB09_001093"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDL5233227.1"
                     /translation="MKTLILYFTTDGQTKKIAERLADVITHEVELISLKDQAVDFAEK
                     IANADQIVIGASIRYGHFNPLVYQFVEQHYPALNAKKTAFYGVNLTARKDNRNTPETN
                     TYVRKFLAKVKWKPTHIEVIAGALLYLRYKPFDRLMIRFIMKITKGETDTSKEYEYTD
                     WQQVENFGKLLANQL"
     gene            7091..7486
                     /gene="mscL"
                     /locus_tag="PXB09_001094"
     CDS             7091..7486
                     /gene="mscL"
                     /locus_tag="PXB09_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDL5233228.1"
                     /translation="MSILKEFREFAVKGNVVDMAVGVIIGGAFGKIVSSLVSDVVMPP
                     IGWLIGGVDFKDLAIEIAPAKEGAEAVMLKYGAFIQNVFDFLIIALAVFGMVKVINSL
                     KKAPVVEEAPAEPTAEEKLLTEIRDLLKK"
     gene            complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXB09_001095"
     CDS             complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXB09_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDL5233229.1"
                     /translation="MANIKSAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAVAAGDK
                     AAAQTAFVEMQKVVDRMASKNLIHANKAANHKSKLAAQIKKLA"
     gene            8126..9700
                     /gene="murJ"
                     /locus_tag="PXB09_001096"
     CDS             8126..9700
                     /gene="murJ"
                     /locus_tag="PXB09_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDL5233230.1"
                     /translation="MSKKLLRSGMIVSFMTLISRILGLIRDIVVATILGTGVSADIFL
                     FANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDPNKTREFIAKVSGTLGGLVTVVTL
                     VAMIASPVVAALFGTGWFLDWLYDGPNAEKFTQASFLLKITFPYLWFITFVALSGAVL
                     NTIGKFGVMAFSPVLLNVAIIAVALWGRDYFDSPDIALAWGVFLGGLLQFLFQIPFMK
                     KEGLLVKPKWAWKDEGVTKVRKLMIPALFGVSVTQLNLLLNQVIASFLITGSISWMYY
                     ADRLIEFPLGLFGIAISTVVLPSLSRIAKNKELTEIQRGEHFQNTMDWGVRMVLLLGI
                     PAMIGMAVLAQPIIMTMFMRGKFGFEDVLATSYPLWVMCLGLNSYMLISVLANGFYAN
                     QNTKTPVKVGIIAALSNICFGLAFAPFLGYIGLALASACSALVNVSLLYVNLSKNGYY
                     KVSHKTVLFVLKLFIAACVMGALVAYFTPEIELWALMTMWQKVYWLIWLMILAGGSYF
                     ASILVLGIRKKDFRSA"
     gene            9702..10169
                     /locus_tag="PXB09_001097"
     CDS             9702..10169
                     /locus_tag="PXB09_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDL5233231.1"
                     /translation="MKSLKLKIPPPAWFLLCAALMWLVAQYVPVSLPNYQHTAIFFSG
                     LAVAIIGGAVAVSALWVIHQAKTTYSPFRPQHTAKLVTWGIYRKSRNPMYLSLLLGLI
                     AWALWLGAMLAWLVLPLFVWLITYFQIKPEEQILAQKFGTHYAKYCNQVRRWL"
     gene            complement(10234..12243)
                     /locus_tag="PXB09_001098"
     CDS             complement(10234..12243)
                     /locus_tag="PXB09_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDL5233232.1"
                     /translation="MDLIKKLNTGSTFRVPIFLPSLLFVSFVAVFCIIFPQQAQTSLD
                     TIKNSLFQHFSWFYIFAGSIFFLFLIFLSFSRLGDIKLGADTDEPEFGFGSWIAMLFA
                     AGMGIGLMYFGVAEPILHYLKPVQQNLTEPERMKEAMMTTFYHWGIHAWAIYGVIALA
                     LAYFGFRYKLALTIRSGFYPLLKHRISGFWGHLIDIIALCSTIFGLTTTLGFGVMQVS
                     AGFNNLGLIEQSNFTVLAIIVTVAMALAVLSAVSGVGKGVKILSEINLTLAGLLLIFV
                     IITGPTLLLFSSFTENLGYYFSSLLEMSFRTFAYEPEHQGWLSGWTVLYWAWWASWAP
                     FVGLFIAKISKGRTIREFILGVLFVPSLFNILWMTSFGSSAIWFDQQTAGALAEVSGN
                     TEQLLFTFFEQLPFGSIASFVAVIVISIFFITSADSGIFVLNSIASQGEENAPKWQSV
                     LWGALLAILALSLLYSGGLASLQTMTLIIALPFTFIMLILCIGLWKGLMVDNQYFNKK
                     FSQGSQHWAGKDWKQRLEKIINPSNKQDVRHFFIKVARPAFLELIEEFESYGLIAKMN
                     FTNEQNPKLEFEVVKENLRNFIYGIESVPRELSDLVVGDDNLPNIEQNTIYEPITYFL
                     DGRKGYDVQYMTKEELIADVLQQYERFINLAMDNSHDLMTADFNH"
     gene            12435..12970
                     /locus_tag="PXB09_001099"
                     /pseudo
     CDS             12435..12970
                     /locus_tag="PXB09_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            12998..13609
                     /locus_tag="PXB09_001100"
     CDS             12998..13609
                     /locus_tag="PXB09_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233233.1"
                     /translation="MKYEAKPLIISPNHIQQRLHGKLLARALLIIALLMLAKFIYIAS
                     LSNYFTFYLMEKFQLNIAMAQLSLFTFLGAVALGAFVGGPIGDKIGRNAVIWFSFLGM
                     APFALLLPHADLFWTIVCAIFAGFIMSSAFSAMVVYAQEAVPGRVGLISGTMFGLMFG
                     IGGLSAAVLGFFADEYGLESIFKACAYLPLLGFAALGLPKRNI"
     gene            complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXB09_001101"
     CDS             complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXB09_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5233234.1"
                     /translation="MNISGKLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQR
                     VLWSALFAVFLLLIFQQGRAVINAFKQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHIL
                     DASLGYFINPIFNVFVGRLILKEQLNKAQLLALLFAISGILWLAIPAGQIPWVALILA
                     ASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITYLCFCYHQNILVFSELNPLQMAVL
                     LCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQFLCGVLIFNETLSAERAVGYI
                     LVWIGVGVFLLGMKKAGVKR"
     gene            complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXB09_001102"
     CDS             complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXB09_001102"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDL5233235.1"
                     /translation="MNNLQLDNIDWQPTASIPHLIQRSKIITEIRKFFTDRGLLEVET
                     PILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHLMTSPEYHMKRLLAAGSGPIFQLCKV
                     FRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCEPAESFSYQFVFQTY
                     VGLDPLSATKAQLVEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFP
                     STQAALAQISSEDHRVAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGL
                     EPQQLDVRFLAALKAGFPNCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA"
     gene            15908..17710
                     /gene="frdA"
                     /locus_tag="PXB09_001103"
     CDS             15908..17710
                     /gene="frdA"
                     /locus_tag="PXB09_001103"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDL5233236.1"
                     /translation="MQSVNFDVAIIGAGGGGLRAAIAAAEANPNLKIALISKVYPMRS
                     HTVAAEGGSAAVIKDTDSFDNHFNDTVGGGDWLCEQDIVEYFVEHSPIEMTQLERWGC
                     PWSRREDGEVNVRRFGGMKIERTWFAADKTGFHILHTLFQTSIKYPNIVRFDEHFVLD
                     ILTDNGEARGCVAMNMMEGTLVQINANAVVIATGGGCRTYRFNTNGGIVTGDGLSMAY
                     RHGVALRDMEFVQYHPTGLPNTGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIG
                     KPENKYMELGPRDKVSQAFWQEWRKGNTLKTAKGVDVVHLDLRHLGEKYLLERLPFIC
                     ELAKAYEGVDPAKAPIPVRPVVHYTMGGIEVDMNAETSIKGLFAVGECASSGLHGANR
                     LGSNSLAELVVFGKVAGENAARRALEVTARNQPQIDAQAKDVVARLHALANQEGNESW
                     SDIRNQMGDAMEEGCGIYRTQESMEATVNKIQELKERYKNISVKDKSSVFNTDLLYKI
                     ELGFILDVAQSIACSAVERKESRGAHQRLDYVERDDVNYLKHTQAYYNAEGTPTIKYS
                     DVKITKSQPAKRVYGAEAEAQEKVKKAAEAQAQQ"
     gene            17726..18457
                     /locus_tag="PXB09_001104"
     CDS             17726..18457
                     /locus_tag="PXB09_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDL5233237.1"
                     /translation="MANLDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFI
                     KDELEPELSYRWSCRMAICGSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERD
                     LVVDLSHFIDSIEAIKPYIIDNKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQ
                     FGLNPEFIGPAAITLAHRYNLDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHV
                     GPASAVNQGKLESAKDYVISMIKPR"
     gene            18467..18859
                     /gene="frdC"
                     /locus_tag="PXB09_001105"
     CDS             18467..18859
                     /gene="frdC"
                     /locus_tag="PXB09_001105"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDL5233238.1"
                     /translation="MSATKRRPYVRGMKASWWKKLDFYKMYMVREATCLPTVWFCIVL
                     FYGAVALSKGTFTTDFVDFLQNPLVVILNIISLAAMLYHAATLFVMTPAVMSVMVKGK
                     HLPVSVGRNILWAATGVISVIALILVYI"
     gene            18873..19220
                     /gene="frdD"
                     /locus_tag="PXB09_001106"
     CDS             18873..19220
                     /gene="frdD"
                     /locus_tag="PXB09_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDL5233239.1"
                     /translation="MSLDQNPKRSNEPPVWLLFSAGGMVSALFFPVVIFIIGLLLPFG
                     LVSPDNIISFAHTWIGKLAIMVLAIFPMWAGMHRIHHGLHDLKVHTPAGNVIFYGLSI
                     LYTILVIIAVVQI"
BASE COUNT         5483 a         3810 c         4333 g         5738 t
ORIGIN      
        1 ctaagtttcc acgcttaata gttacatcgt ttaagttgag catagaaaat ccttatcgtt
       61 tcgccaatac aatccagaaa aagaactgca caccgactaa tgccgtaata ataccgaccg
      121 gaaataatgc gcccggcaca aggctttttg atagcacgga tgacatcgat aaaaatgccg
      181 cacccactaa cattgaaccg ggcaggaaaa agcgttggtc ttcgcctagc aacattcggg
      241 caatatgcgg ggcaactaag ccaataaagc cgataatgcc tacaaagcta atgcaggtgg
      301 ccgtcattac agacacaatc agcaatgttt tcattcgtaa ccaagttaag ttaatgccta
      361 agctcaatgc tcgagcttcg cccaaacgca aggcagttaa tttccacgca tctttgaata
      421 ataataaaat acagactgta gttacgccaa aggcaattga gatagtctgc caagtagctt
      481 tagttaaatt accgaatagc caaaacagaa tttgttggga tacctcaggt gcagaaataa
      541 attgcaccaa tgacagtaaa gactgaaata aaaacaataa ggcaattcct accagcacta
      601 atattgccga gctaaaacgt cctaaagagg aaaaggcaaa taaaatggcg gaagaaaata
      661 gtgtcatcac aaaagccccg acaggtacag aaatttcggt gggtaaacca aatccaccaa
      721 aggcaatcac aatcgaagca ccaaagccgg ctgcagctgc taaacccaat gtataagggc
      781 ttgccattgg attattaagc aaagtttgaa tttcagctcc gccaacacca agtgctgctc
      841 caaccaccaa tgccattatt gccattggta agcgtagctc atagacaatc actttggtgg
      901 tttcttcaat ttcgcctaat tggaataagg ctttccaaac ttcattaaac ggaagcaggg
      961 aagggcctgt cataatatcg aaaatgaggc tgagtaaaca aatgagtaag aaaaagagta
     1021 ataaaaaact gcgtttcttt tcaatagttc ggtgcttttt agctatttgt tggggagaga
     1081 gcgttgtttg cataaaaatg taatgtttga gaattattat cagacaggat aagagaaaag
     1141 atcgataaat tcaagaatat ccaagatacc gactaaagta ttcaactaag ttctcgagta
     1201 gccctgtctt ttacagtaaa aaactcctga atagcggctt cttctaaaag agtataattc
     1261 tgccaaattt cggttacagc atttcttaaa atctcacctt tcttaactct tgatgacatt
     1321 cccaagaata cctgttctaa gaaatctaaa tcggcataat gagttaatgc ttttcgtgac
     1381 tgtaaccagt taaacatcgg cacaaattgt tcaggaaaaa tcgtgcgttg ttgttcgatt
     1441 tgctgaaaga tctgtgcttg tacctcattt aaatctttag caaataaccg ttggaaatgt
     1501 ttagcgagaa aatggtcgat cataatatcc gacacaatgc ctttataacg cccgaatgtg
     1561 ccttggagta attgggttgt gaggctgtcc ggtcggtccg aaatcttatc aatcgagcgg
     1621 tgtaacacca caccgctttt taagttatcc gctaaattga gatgcggaat taaaccttta
     1681 tagaaatcac cggcaaagtt gccatatagg gtctgttgct tggtttgggt gtcaatttca
     1741 agtgaaatca gcgaatgggt aagaaaattc atttatgctc caagtgcagt ttggtgatac
     1801 tcaaacccaa actcgttggt ttcgcctttc ggtacaaact caaataaatg cgtaatgcaa
     1861 tttggagcat cgctgtcttg gtgcgaaaca aaaagtagtt gcgtttggct gttagtcact
     1921 aattgttcaa tgaactgttt gactaatttg cggttaatgc cgtctaaacc ttgtaacggt
     1981 tcgtctagaa tcagaattga tgggtgtttc accattgctc gggtaatcaa aagtaagcgt
     2041 tgttgccccc acgagagaga gcgaaacggc tttttggcaa cattgcttaa attgaggcgt
     2101 tccaaccatt ccattgcttt taattgcaag gcattcggca cttgttgata cacgccgatg
     2161 ctgtcaaaaa agccagaaag aatgacctcc attgcggagc aatttacccg ataatccata
     2221 tgcaactggc tgctgacata gccgatattt ttcttaatat cccaaatggt ttcgccactt
     2281 ccccgttgtt tgccaaatag tcggacttta ttggcataag attgtgggtg atcgccggtg
     2341 ataatcgaaa gcaaggtcga tttcccagct ccattcgggc ctttaatcca ccagtgttgt
     2401 ttaggctgaa ccgtccaact taggttatct aaaatcttct tctccccata ttgaatattc
     2461 acattttcca actcaaacgg attgatgttt tccggcaggc tgagtagcgg agctgcacta
     2521 tcaggcagtg gcacattgac attctcttct gcaaatttta gctgagaata gaccgcttgt
     2581 tgttcaattt ctgctcgctc tccttgcaga attaatgata aattatctaa taactcaata
     2641 tgattggcag catcaggaat atcgttaaaa cgatttacaa tcagcactaa cgccattttg
     2701 ctttgtagtt cggcaatcag ttgttgccaa tattgcaccg actgctgatc cagcccttca
     2761 aacggttcgt ctaaaatgaa taaatccggc tcgctcacta acatttggca aaatagcact
     2821 ttgcggcttt caccggtgga aaggtgcata aacgggcgtt caagcagatg ttgaatatgc
     2881 aatttgtggg catattcctc acataacgcc tcttttggac tgccatttaa aattacttgt
     2941 cgtgcggtta agccgaaatc atcgggcgag acactatcgt tgttccgatc tttgaaaatc
     3001 tgctccaaca ttttttgttg ttgctcgaaa gagaggagct gaatatgttg gaacgaatta
     3061 ccatagtcgc cggaatagag cgagatttta ccctgtaaag cgagtgaaaa agttgttttg
     3121 cctgaaccgt ttccgtctac gaccacctaa aagtcattgg gttggatctg taaggcgtca
     3181 atcgtgagtt tatgttgttt aaccagtgaa aatcgggcat tggttattgt aagtgaaggc
     3241 tgtgtttgca tatatttccc gttttaactt agttgtgtcc cgctgacgaa ccaatccgct
     3301 cgaccgttta agaaatcttg caccgacatt ggttttttac ccgccggttg aagttgggta
     3361 atattcagca cgccctgttg ggtggcaatt tgaatcccgg ttttatccac attaattacc
     3421 gtgccggctg ctttttcttg gtgaggtaac accgtggctt ggtgaatttt gatactttgc
     3481 tcaacgccat caacggttaa ggttaaaaaa ctaaacggcc aagggttaaa agctcggata
     3541 ttgcgttcca gttgaactgc tgggagttgc caatccaatt tagcttcttc tttggaaagt
     3601 ttctcggcgt aattggacag tgcttcatct tgtttttccg ctttgaatgt gtggttggct
     3661 aaaccgttta acacctcaag caatgccaga ggggcaagtt ctgccagttt ggcatacaag
     3721 gaggcggagg tttcattcgg ctcaatcggg gttgtgactt tatgtaacat atcaccggtg
     3781 tctaagccaa cgtccattag cataatggtt acgccggttt ctgtatcacc tgcccaaatc
     3841 gaacgctgaa tcggagctgc tccacgccag cgaggtagta gcgaaccgtg tacgtttagg
     3901 caaccatatt taggagcatt caatactgct tcaggtagaa ttaagccgta agctaccacc
     3961 accatcacat cggcatttag ggctttcagt tcagcttgag cctcttcctt acgcagggat
     4021 ttgggttggt aaacaggaat gttgtgagct tcggccagct gttttaccgg gctggcttgc
     4081 agttttttgc ctcgcccggc aggtttatcc ggctgagtat aaaccgcaat cacgttatgc
     4141 tcggaatcta ataaggcttg taaatgttga gcggcaaaat caggcgtgcc ggcaaaaata
     4201 atattgagtt ttgacatatt ttttattcgt tcaagttatc aatgaaagac ttattaaacc
     4261 attaaacagc acaaataaaa agtggcttga atatggtatc attgccacat tcaagataag
     4321 agaatcaaac aatggaattt tttatcccca aagcggatac aatttttgaa gaagagatta
     4381 aaaaaagccg atttatcacc taccttcgcc atactgaggg tatggagcag gccaaggcat
     4441 tttggcagga gctgaaaatt cagcatccgc acgcacgcca ttggtgttgg gcaacggtgg
     4501 caggcttgcc gaatgattcg caacaatacg gcttttcgga tgatggagaa ccgtctggta
     4561 cagcaggtaa gccaatgctc aattatttgc ttgggtcagg cttgggggaa attacagcgg
     4621 tggtggttcg ctactacggt ggtatccagc ttggcaccgg cggcttggtg aaagcctatg
     4681 gcaatggggt gcaacaggcg ttattgcagt tggagcggat tcgcaaagtt ttgcgaaaaa
     4741 actaccgctt gcaatgtgaa tatgagcagt ttaataccat ttctcatctc attagcgaga
     4801 aagatattgt gattgtcgag caacttttta gcgataaagt ggatttgttg ctggcattta
     4861 acccgagcga ggttgaggcc tttgcagatg aattaaccca acgcttttcg ggcaagctcg
     4921 cattaataaa agaagaaatc tagtctatgc aatttttttc cattattcgt attgttggca
     4981 ttttggtgat gtgtttttca ttcacaatgc ttgtgccggc aacggtcgcc ctaatttatg
     5041 gcgatggcgg tgggcgggcg tttttagaag ccttcgctct gaattttatg gtcggtacgc
     5101 tgctttggtg gctgtgccgt gacaacaaaa acgagctacg ttcccgtgag ggctttttga
     5161 ttgtagtact gttttgggtg gtgctgggtt tgctcggggc tgtgcctttt attattttgg
     5221 aaaaccccga tttaaacgtg gcggaatcca tttttgaatc cttttccggc ttaactacaa
     5281 cgggtgcaac cgtcatcacc ggcttagata gcttgcccaa agcgatttta ttctaccgcc
     5341 aatttttgca atggctaggg ggaatgggga tcattgtgtt agcggttgcg attattccgc
     5401 tgttaggcat tggtggaatg caactttatc gtgcggaaat gcccggaccg ctcaaagagc
     5461 agaaaatgcg acctcgcatt gcggaaacgg caaaagcgtt gtggctgatt tatctcagcc
     5521 tgacgattct gtgtgcggtc gcattttggc tcgccggaat gacggtgttt gatgccattt
     5581 cgcatagctt ttccacggtt tcgattggcg gattttctac ccacgatgcc agcatcggct
     5641 attttaataa tgcggcaatt agctatatta ccgtgttttt cctgctactt tctgcctgca
     5701 actttgcatt gcattttgcg gtgattgatc gcatacgaga tgcacaatca cgcaaaaaag
     5761 ggggtatttt aagccgcttg tattggggcg attacgagtt tcgttttttc ttgatggtgc
     5821 agttagggct tttcttggtt tgtaccttgg tgttagtggg ttacggttat ttcgataata
     5881 cctctgttac gattgagcaa gcgttgtttc aatcggtgtc catttccacc acggccggct
     5941 ttactaccaa tgattttagc caatggagtt cgtttttacc cacgctgttg gtgctgtctt
     6001 catttatcgg tggttgtgcc ggctcaaccg gtggcggctt gaaagtgatt cgggtgttgc
     6061 tgctttattt acaaagtaaa cgtgaaatcc accgctacat tcaccccaat gtgattcaac
     6121 cgattaaatt aggcaaccac gttttatcgg aacgggtggt tgatggtatt tgggcgtttt
     6181 tctcggcgta ctttttcgtg ttcgtgatct gctggcttgc taccatcgct tgtggaatgg
     6241 aaacctttga tgctctaaat gcggtaattg cctcactaaa taatctaggt cctgcattag
     6301 ggagcgtgag cagcaatttc acccaagtgc cggacagtgc caagttagtg ctgacttttg
     6361 caatggtatg cggacgtctg gaagtgttta ccttgctggt gattttaagc cctgtttttt
     6421 ggaaagatta aatgaaaacc ttaattctct attttacgac cgatggtcaa accaaaaaaa
     6481 ttgccgaacg attggcggac gtgattactc acgaagtcga gctgatttcg ctaaaagatc
     6541 aagcggtcga ttttgccgaa aaaattgcaa atgccgacca aattgtcatc ggtgcttcaa
     6601 ttcgctatgg gcattttaac ccgttggttt atcagtttgt ggaacagcat tatccggcat
     6661 taaacgccaa gaaaactgcc ttttacggtg tgaatttgac cgctcgcaaa gataatcgaa
     6721 acacgcctga aaccaatact tatgtgcgta aatttttagc taaagtgaaa tggaaaccaa
     6781 cccacattga ggtaattgct ggggcattac tttacctacg ctataagcca ttcgaccgat
     6841 tgatgattcg ctttattatg aaaattacca aaggcgaaac cgatacctcc aaagaatatg
     6901 agtacaccga ttggcagcag gtggagaatt ttggcaaatt attagccaat cagttataat
     6961 caaactgatc taaatcaaaa aaatgtaaat ttatttaaat gttgtagaaa ttttaaagat
     7021 tttgattata atcgccagcc cacgttcttg cgaagaccgt gtttaatcat tgaatgaaag
     7081 gaaagccccc ttgagtattt taaaagagtt ccgtgaattt gcggtaaaag gtaatgttgt
     7141 tgatatggct gtcggtgtga ttatcggcgg tgcattcggt aaaattgttt cttcattagt
     7201 tagcgatgtt gtaatgccac ctatcggttg gttaatcggt ggcgtggatt tcaaagattt
     7261 agccattgaa atcgccccgg caaaagaagg tgcggaagca gtgatgttaa aatacggtgc
     7321 atttatccaa aacgtatttg atttcttaat tatcgcactt gcggtattcg gtatggtgaa
     7381 agtgattaac tcactgaaaa aagctccagt tgtagaagaa gctcctgcag agccaacagc
     7441 ggaagagaaa ttattaactg aaatccgtga tttattgaaa aaataattaa ctgattttga
     7501 aacaagggct attttagaat atctagaata gccctttgtg ttatggttaa aaagaaaaaa
     7561 accaacataa agtcggtttt tttcatatct gttcgatatt acgctaattt tttgatttgc
     7621 gctgctaatt tagatttgtg gttagccgct ttgttagcgt ggattaagtt tttagatgcc
     7681 atacggtcta caactttttg catttcaacg aaagccgttt gagctgctgc tttatcgcct
     7741 gctgctactg ctgcatatac ttttttgatg aatgtacgca tcattgagcg ttggcttgcg
     7801 ttgtgttggc ggcgtttttc agattgaacc gcacgttttt ttgctgactt gatattagcc
     7861 aaggtcaaac tcctaaaata tctgtgtaaa aattagatat aaacaaaatc gttgtttata
     7921 ttgcctatcg atagttttta attcattttc aacgagacac gtgcttgaaa ataacaccgt
     7981 ttttctgata gaaaacgata gggcgagatt ttaacagttt ttttctgatt ttcctataac
     8041 aaactgctaa aattatgatc gatttttagg atcagactac aagcggtctg atttttcaat
     8101 aattttacta atattactct ttattatgag caaaaaactt ttaagatcag gaatgatcgt
     8161 aagctttatg accttaattt ctcgcatact cggtttgatt cgagacattg tggtggcaac
     8221 cattttaggc acaggcgtga gtgccgatat tttcctgttt gccaaccgta ttcccaattt
     8281 tcttcgccgt ttgtttgccg aaggggcatt ttctaaagcc tttgtgccgg tgttggcgga
     8341 atataatgcg gataacgatc caaacaaaac gagagaattt attgccaaag tatcgggtac
     8401 attaggaggt ttggtaactg ttgttaccct tgtggcaatg attgcctcgc ctgtggttgc
     8461 cgctcttttt ggtacaggtt ggtttttaga ttggctttac gacgggccaa atgccgaaaa
     8521 attcacccaa gcctcttttt tgctcaaaat cactttccct tatttgtggt ttattacctt
     8581 tgtggcgtta tccggtgcgg tgttaaatac catcggtaag tttggggtga tggcattttc
     8641 cccggtgttg ctgaatgtgg cgattatcgc ggtagcgtta tggggcagag attatttcga
     8701 ttccccggat attgccttag cgtggggggt atttttaggc ggcttattgc aatttttatt
     8761 ccaaattcca tttatgaaaa aagagggctt actggttaag ccaaaatggg cgtggaaaga
     8821 cgaaggtgtc actaaagtcc gtaaattaat gattccggct ttatttggcg tttccgttac
     8881 ccagctaaat ttactgctaa accaagtgat tgcctcgttt ttgattaccg gctcgattag
     8941 ttggatgtat tatgccgacc gcttaattga atttccgctc ggtttatttg gaattgcgat
     9001 ttccaccgtc gtgctgccaa gcctttcccg tattgcgaaa aacaaagaac tcactgaaat
     9061 ccaacgtgga gaacactttc aaaacacaat ggattggggg gtgagaatgg tgctgttgct
     9121 cggcattccg gcaatgatcg gtatggcagt gctggctcag ccgattatta tgacaatgtt
     9181 tatgcggggt aaatttggtt ttgaagatgt gctggcaacc tcttatccac tttgggtaat
     9241 gtgcttgggg ttaaacagct atatgttgat tagcgtgctg gcaaacggtt tttatgccaa
     9301 ccaaaacacc aaaacaccgg taaaagttgg gattattgcc gccttaagta atatttgctt
     9361 tggcttggcg tttgctccgt ttttgggata cattggttta gcgttagctt ctgcgtgttc
     9421 ggcattagtg aatgtgagct tgctgtatgt gaatctctca aaaaatggtt actataaagt
     9481 aagccataaa accgtgcttt ttgtgttgaa actattcatc gccgcttgtg taatgggggc
     9541 gttggttgcc tatttcacgc ctgagattga actttgggca ttaatgacaa tgtggcagaa
     9601 agtgtattgg ctgatttggc tgatgatctt agccggcggt agttattttg cctctatttt
     9661 ggtattaggc attcgtaaaa aagatttccg ctcggcataa aatgaaatca ttaaaactga
     9721 aaatcccgcc gccggcttgg ttcttgcttt gtgccgcttt aatgtggctg gtagctcaat
     9781 atgtgccggt gagcttgccg aattatcagc atacagccat attttttagc ggtttagctg
     9841 tggcgataat tggcggagcg gttgccgtct cggcactttg ggtcatacac caagcgaaaa
     9901 cgacatacag tccttttcga ccacaacata ccgctaaatt ggtcacttgg ggcatttacc
     9961 gcaaaagccg aaacccaatg tatctttcgt tactattagg tttgattgcg tgggcattat
    10021 ggttgggggc aatgttggcg tggctggttt taccgctgtt tgtatggttg ataacctatt
    10081 tccaaatcaa gccggaagag caaattttag cccaaaaatt cggcacacat tatgccaaat
    10141 attgcaacca agtaaggcgt tggctttaaa tgcaagcggt gagattttgt tggaaatttg
    10201 caaatttttc cgaaaatctc accgcttgtg gggttagtga ttgaaatcag ccgtcattaa
    10261 gtcgtgcgag ttgtccatcg ctaaattgat aaagcgttca tactgttgca gcacgtcggc
    10321 aatcaactct tctttggtca tatattgcac atcataacct ttccgcccgt ctaagaaata
    10381 agtaatcggc tcgtaaatgg tattttgctc aatgttcggt aggttgtcgt cacctaccac
    10441 caaatccgat aattcccgtg gcacactttc aatgccgtaa atgaaattgc gtaaattttc
    10501 tttcaccact tcaaactcta atttcgggtt ttgttcgttg gtgaaattca ttttagcgat
    10561 taagccatag ctttcaaatt cctcgataag ttctaaaaat gctggtctgg caactttaat
    10621 aaagaagtga cggacatctt gcttattgct tgggttgatg attttctcca agcgttgttt
    10681 ccaatcttta cccgcccaat gttggctacc ttgcgagaat tttttgttga agtattggtt
    10741 atctaccatt aatcctttcc ataagccgat acagagaatc agcataatga aggtaaatgg
    10801 taaggcgata atcagtgtca ttgtttgcag agaagccaag ccacccgaat agagtagtga
    10861 taacgctaag atggctaata atgctcccca aagcacgctt tgccatttcg gtgcattttc
    10921 ttcgccttgt gaagcaatgc tgttgagaac aaaaatcccc gagtcggcag aggtgataaa
    10981 gaaaatactg ataacaatga cggcaacgaa agaggcaata gagccaaacg gtaattgctc
    11041 aaaaaaggta aataacagtt gttcggtatt gccgctgact tcagctaaag caccggcagt
    11101 ttgttgatcg aaccaaatgg cagagctgcc gaagctggtc atccataaaa tgttaaacag
    11161 cgatggaaca aatagcaccc ctaaaataaa ttcacgaatg gttctgcctt tagagatctt
    11221 ggcaataaac aaaccaacaa atggcgccca agatgcccac catgcccaat aaaggaccgt
    11281 ccagccgctt agccagcctt gatgttccgg ttcataagcg aaggtacgga aactcatctc
    11341 aagcagcgag ctaaaataat agcctaaatt ttcggtgaag cttgagaaaa gtaatagagt
    11401 tgggccggtg attatcacaa aaataagtag caatccggct aatgtgagat tgatttcact
    11461 taagatttta acccctttgc ctacgcccga aacggcagat aacacggcaa gagccattgc
    11521 tactgttacg ataatcgcaa gaacagtaaa attgctctgt tcaattaaac ctagattgtt
    11581 aaagccagca ctgacctgca tcaccccaaa gccaagtgta gtcgttaaac cgaaaatcgt
    11641 gctacaaagg gcaataatat caattaaatg cccccagaag cctgaaatac gatgttttag
    11701 taagggataa aatccggaac gaatagtgag tgctaactta tatctgaagc caaaataagc
    11761 aagagctaag gcaatcacac cataaattgc ccaagcgtga ataccccaat gatagaacgt
    11821 tgtcatcatc gcttctttca tacgctccgg ctcagttaaa ttttgttgga cgggtttaag
    11881 gtaatgcaaa ataggttctg ctaccccaaa atacattaac ccgatcccca ttccggcggc
    11941 gaataacatc gcaatccaag agccaaaacc aaattcaggc tcatcggtat ctgcccctaa
    12001 tttaatatca cccaatcggc tgaaagagag aaaaattaga aacaggaaaa agatagagcc
    12061 tgcaaaaata tagaaccagc taaaatgttg gaagagacta tttttgatgg tatcaagtga
    12121 ggtttgtgct tgctgtggaa agatgataca gaaaacggca acaaagctga caaagagtaa
    12181 actcggtagg aaaatcggta ccctaaaggt acttcctgtg tttaattttt tgattaaatc
    12241 caatgctatt tcctctattt ttgaatggtt agaggcttga atatagcaaa aagatataaa
    12301 aataacaaat ttaagacgta ttggtaataa tattgcaacc taatgggttt ggtaaaaaaa
    12361 tcgggaaatt tgaccgcttg cacattcatt atttgcgagt agaatatttt tcatttataa
    12421 aaaacgaata aagaatgcac acacaacata acgctcaaaa aatggttttg cccattttac
    12481 tgctgatttc cctttctcat ttgttgaatg atttagttca agcagtaatg gtttcgatct
    12541 atccaatgct aaaagaaaat taccaactga gttttgctca aattggtatg atttcactca
    12601 tttatcaaat taccgcatct attattcagc cgggtattgg gctttatacc gatacccaaa
    12661 accgaattta ttgcccgtca gtatgctgat tacgcttctt tccgtgattt tacttgcctt
    12721 ttcgccgaat tttggcgtgt tactgatagc cgctgcgtta atggggatag gctctgccat
    12781 ttttcaccct gaagcctctc gggtggctcg aatggcatcg ggcggtaaat ttggtacagc
    12841 tcagtcgctt ttccaagtag gtggaaacag tggatcggcg ttaggtccgc tcttagttgc
    12901 attatttatt gtgccgttag ggcaaagtgc ggtgatttgg gttgttgcat ttgtattatt
    12961 ggcattatga tgggttttat ataaagtaag ccgttgggtg aaatatgaag ccaaaccgct
    13021 cattatttca ccaaaccata ttcaacaacg cttacacggt aaattattag ccagagcatt
    13081 attaattatc gctttattga tgttagcgaa atttatttat attgcgagcc tcagtaacta
    13141 tttcaccttt tatttaatgg aaaaattcca actcaatata gcaatggcac agctctctct
    13201 atttaccttt ttaggtgcag ttgctttagg cgcttttgtc ggcgggccga ttggcgataa
    13261 gattggacga aatgcggtga tttggttctc tttcttaggt atggcacctt ttgctttgtt
    13321 gttgcctcac gcagatctct tttggacgat tgtgtgtgcg atttttgccg gttttattat
    13381 gtcatcagcg ttctccgcta tggtggttta tgctcaagaa gccgtaccag gcagagtagg
    13441 gctgatttcc ggcacaatgt tcggtttaat gtttggtatt ggcggcttaa gtgccgccgt
    13501 attgggtttt tttgcggatg aatatggctt ggagagtatt tttaaagcct gtgcctattt
    13561 gccactactt ggttttgctg cattagggct accaaaacga aatatttaac gttttatttt
    13621 tagcgtttga caccagcttt tttcataccc aataagaaaa cccccacccc aatccaaacc
    13681 agaatgtagc ctacagcacg ttcggcggaa agtgtctcat taaaaatcag cacaccgcat
    13741 aaaaattgca gggtaggtga aatatattgc agcataccga gtagcgacat tgaaatgcgt
    13801 cttgcaccca ttgcaaacca tagcaatggt aaggtagtgg caatgccgga gcagagtagc
    13861 actgccattt gtaaaggatt gagttcactg aataccaaaa tgttttggtg gtaacaaaag
    13921 cagagatagg tgatggcaaa aggcgacatc agcaaagttt ctaacgccaa accagacaaa
    13981 ggttccattg gggcaagttt acgaatcagc ccgtaaatac agaaactggc ggctagaatc
    14041 aatgcgaccc acggaatttg tccggcagga atagcaagcc ataaaatgcc gctaattgca
    14101 aacagcagag ccaataattg ggctttattc agctgctctt ttagaataag cctaccgaca
    14161 aacacgttga aaatggggtt gataaaataa cctagactgg catctaaaat atgctcattg
    14221 acgattgccc ataagtaaac cagccagttc acgccaatca taaaagaaga aagcacgaac
    14281 agcccgagta cctttggctg tttaaaggca ttaataaccg ctcgcccttg ttggaaaatc
    14341 agcagcagaa acacagcaaa tagggcagac caaagcaccc gttgagccaa aatttgctcg
    14401 gcaggcattc ccgattggtt gatcggatac caataaatcg gaaaggttcc ccaagttaag
    14461 tagcacagta gggcatagtg ccaaccctgt aatttgcctg aaatattcat tttgctttcc
    14521 taaacgagtg tacaagcggt catatttgtc gatttttttg caaattgcaa atcacaaaac
    14581 ggcataaaaa attaggcttt ttcaatgccg aaagaaataa cctcttcaat tttttccgca
    14641 tccattgcca gcattaacag cctatcaacc ccaagggcga cacctgagca gtttggaaaa
    14701 cccgctttga gtgcggcaag aaaacgcaca tctagttgct gtggctccag ccccattttt
    14761 tcacgttgca gattatcttg ctcgaagcga tgaatttgct catcagcatc gtctaattcg
    14821 tggaagccgt tacagagttc caagcctttg tagtaaaact caaaacgttc ggcaacacgg
    14881 tgatcttccg agctaatttg agctaatgcc gcttgggtgg aagggaaatg ataaacggca
    14941 gttggtcttt cttgcccgat attggcttcg acaacctcgc tgaataaaaa ttgtaacaag
    15001 gtgtcacgct gttcatcatc atcacattgc aagccgtgtt ttcgggcttt ttccacaagt
    15061 tgtgctttgg tggcagaaag cggatctaat ccgacatagg tttggaacac aaattgatag
    15121 ctgaatgatt ctgccggttc gcagtccaaa atttgttgca gtaaatcatc cacttcattg
    15181 attaagcgat acatatcaaa atgcgggcga taccactcca gcatcgtaaa ttcagggttg
    15241 tgtcgcttac cggcttcctc gttgcgaaat actttacaca gttggaaaat cggtccactc
    15301 ccagcagcaa gtagtcgctt catatgatat tccgggctgg tcatcagatg gagtgttttc
    15361 gcctcagggg aaaaaggcga ttgaaactgc gtattgaaag tcgaaagatg aacgtctgtc
    15421 accgaaaatt cgcttaaaat cggggtttct acctctaaaa gccctcgatc ggtaaagaac
    15481 ttgcggattt ccgtaatgat ttttgaacgt tggatcaggt gaggaataga ggctgttggt
    15541 tgccaatcaa tattatcgag ttgtaaattg ttcataaaaa atgaccgctt gaaaatgtga
    15601 ggctatttta gcctaaaaaa gtgagttgcc ctagttaccg atcaagaaaa ataaagagag
    15661 ggttttaact tttttgcaac aaattaaatt ttctcatttt aaacattaga aattttcttt
    15721 ctatcactgt ccaattaaga gccattctca atacctttat gaagctttat tacctttttt
    15781 gaggtagatc acaaaattac attttttatg ttacaaattt gtaaaaatag gttatctcat
    15841 tgctcaaata gtggcacaat atgattactt tttaatgaat taagttattt aactttcgga
    15901 gtgcattatg caaagtgtta attttgatgt cgcgattata ggtgccggtg gtggtggctt
    15961 gcgtgctgct attgcggcgg ctgaagcaaa tccaaatcta aaaattgctt taatttcaaa
    16021 agtttaccca atgcgtagcc atacggttgc agcagaaggt ggttcagcgg cggtaattaa
    16081 agataccgac tctttcgaca atcactttaa tgataccgtc ggtggtggtg actggttatg
    16141 tgagcaagat attgtggagt attttgtaga gcattcgccg attgaaatga cacaattaga
    16201 acgctggggt tgcccttgga gtcgtcgtga agacggtgaa gtgaatgttc gccgttttgg
    16261 aggaatgaaa attgagcgta cttggtttgc ggcggataaa accggtttcc acattttgca
    16321 tactttgttc caaacttcga ttaaatatcc gaatattgtg cgttttgatg agcattttgt
    16381 gctggatatt ctcaccgaca acggcgaagc tcgtggttgt gtggcaatga atatgatgga
    16441 aggcacactt gttcaaatca atgcaaatgc agttgtgatt gcaaccggtg gcggctgccg
    16501 tacttatcgc tttaacacta acggcggtat tgtaaccggc gacggtttat caatggcgta
    16561 tcgtcacggt gtggctttgc gtgatatgga gttcgtacaa tatcacccaa caggtttgcc
    16621 aaataccggt attttgatga cagaaggttg tcgtggtgaa ggtggtattt tagttaataa
    16681 agatggctac cgttacctgc aagattatgg tttaggaccg gaaacaccta tcggcaaacc
    16741 ggaaaacaaa tatatggaat taggccctcg tgataaggtt tcacaagcat tctggcaaga
    16801 atggcgtaaa gggaacacct taaaaaccgc aaaaggcgtg gacgtagttc acttagattt
    16861 acgccattta ggtgaaaaat atttacttga gcgtttaccg tttatttgtg aattagcgaa
    16921 agcctatgaa ggggtcgatc cggctaaagc gccgattcct gttcgcccgg tggttcacta
    16981 cacgatgggt ggtattgaag tggatatgaa tgcggaaacc tcaattaaag gcttattcgc
    17041 agtaggtgaa tgtgcttcat caggcttgca cggtgcgaac cgtttgggtt ctaactcatt
    17101 agcagagctt gtggtgttcg gcaaagttgc cggtgaaaat gcggctcgcc gtgcgttaga
    17161 agtgactgct cgcaaccagc cacaaattga tgcacaagca aaagatgtgg tggctcgctt
    17221 gcacgcatta gcgaaccaag agggtaatga atcttggtcg gatatccgta accaaatggg
    17281 tgatgcgatg gaagaaggtt gtggtattta ccgtacccaa gaaagtatgg aagcgactgt
    17341 aaacaaaatc caagagctaa aagagcgtta taaaaacatc agcgtaaaag ataaatcaag
    17401 tgtgtttaac actgatttac tctacaaaat tgaattaggc ttcattttag atgtggctca
    17461 atccattgct tgctctgcgg tagagcgtaa agaatctcgt ggggctcacc aacgtttaga
    17521 ctatgttgag cgtgatgatg tgaactactt aaaacacaca caagcgtact acaatgcaga
    17581 gggtacaccg acgattaaat acagcgatgt gaaaatcact aaatcacaac cggctaaacg
    17641 tgtgtatggt gcagaggctg aagcccaaga aaaagtcaaa aaagcagcag aagctcaagc
    17701 acaacaatag agaaggagta gtaaaatggc aaatttagat aaaatgacca tcgaagtgct
    17761 acgctacaac cctgaatcag atagcgagcc acatttagac agatatgaag tgccgtatga
    17821 cagccaaact tcacttttag atgcattggg cttcattaaa gacgaattag aaccggaact
    17881 ttcttatcgc tggtcttgcc gtatggcgat ttgtggttct tgcggaatga tggtaaacgg
    17941 taagccgaag ttagcttgta aaacattcct gcgtgattac agcggtttta tgcgaattga
    18001 gccgctggcg aacttcccga ttgagcgtga cttagtagtg gatttaagcc actttattga
    18061 tagcatcgag gcaattaaac cttatattat tgataataaa gcaccggaag gacagcgtac
    18121 taaacaaacg ccggcacaat tagagaaata tcgtcaattc tcaatgtgta tcaactgcgg
    18181 tttatgttat gcggcttgcc cacaatttgg tttgaaccct gaatttatcg gacctgctgc
    18241 gattacattg gctcaccgct ataacttgga taaccgtgat aatggtcgtg aagagcgtat
    18301 gaagctactc agcagcaaaa acggtgtttg gagctgtact ttcgtgggtt actgctcgga
    18361 agtctgtccg aaacacgtcg gccctgcttc ggctgtaaac caaggtaaac ttgaaagtgc
    18421 gaaagattat gttatctcaa tgatcaaacc gagataggag gaagaaatgt cagcaacaaa
    18481 acgtagacct tatgtaaggg gaatgaaagc cagctggtgg aaaaaactcg acttctataa
    18541 aatgtatatg gtgcgtgaag ctacctgtct tccaactgtt tggttctgca ttgtattatt
    18601 ttatggagca gttgcgttaa gtaaaggaac atttactacc gattttgtgg atttcttaca
    18661 aaatccgtta gttgttatcc taaacataat ttcattggca gcaatgttat atcatgcggc
    18721 aacacttttt gtgatgacac ctgccgtcat gtccgtgatg gttaaaggta aacacttacc
    18781 agtctcggtt ggaagaaata ttctttgggc agcaacaggc gtaattagcg taattgcatt
    18841 aatcttggtt tatatttaag aaggggaaga aaatgagtct tgatcaaaac ccaaaacgtt
    18901 caaatgaacc gccggtatgg ttgcttttta gtgctggggg aatggtaagt gcattatttt
    18961 tccctgtggt aatctttatt atcggtttat tactgccatt cgggttagta tcaccagata
    19021 atatcatttc ctttgcccat acttggatcg gcaagctcgc tattatggta ttagcgattt
    19081 tccctatgtg ggcaggaatg caccgtatcc atcatggatt acacgacctg aaagttcaca
    19141 cgccagcagg taatgtgatt ttctacggat tgtctatctt atacacaatt ctagtaatca
    19201 tcgcagtcgt gcagatttaa atgagaaaga ccatcttgta taaagcagat ggtcttttca
    19261 tttttaatat gctaacaagc ggtcgaattt ataagaaaat ttgcaaatat tagaaatttt
    19321 gccgataaaa cgatcgtttt gtattaaata tctgcaaaaa agat
//
LOCUS       DANLTI010000041        18616 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.041, whole genome shotgun sequence.
ACCESSION   DANLTI010000041 DANLTI010000000
VERSION     DANLTI010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18616)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18616)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18616
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.041"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            132..779
                     /locus_tag="PXB09_001107"
     CDS             132..779
                     /locus_tag="PXB09_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDL5233240.1"
                     /translation="MSIFQQTNPNRRRYGLAVFIGIIAGIISAFVKWGAEHPFPPRSP
                     IDLFTAACPQPVLDAMNAAADQVAAKTIALQECSRAFLNPPHVFLRDYIGIDPTEAAF
                     TFADHAFNWIGVTHMIFSLVFAIGYCIVAEIFPKIKFWQGIGAGIIANICVHYITFPA
                     LGLTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITREPDAEVPLDQPFR"
     gene            complement(912..2288)
                     /gene="trkA"
                     /locus_tag="PXB09_001108"
     CDS             complement(912..2288)
                     /gene="trkA"
                     /locus_tag="PXB09_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDL5233241.1"
                     /translation="MKVIILGAGQVGSTLAENLVSEDNDIVLVDNDPTRLDKLKDKHD
                     LQVIRGEYASPQTLRDAGAGDADLLVAVTNSDEVNMIACQIAYTLFNVPTKIARIRSA
                     DYVRERERLFNDDVLPIDHIIAPEILVKEDILRLIHYPGALQITHFADELVSIVNVKA
                     YYGGPLVGYPISALRDHLPHIDARVVAIFRQDKAIVPQGSTIIEAGDEVFFICATQHI
                     RAVMSELQRLDRPHKRIMIVGGGSIGSSLARDLEDQYRVKIIERNPVRAEKLAEKLSK
                     TMVLTGDASDEELLFEEHIENIDLFLAVTSDDEANIMSALLAKRLGAKKVIILVQRPA
                     YLHLIQGGTIDIAISPQQATISALASYVRKGDILQVSSLKLGVAGAVEIIAHGDATTS
                     KVVGRQIRELKLPQGAIVGAVVRGEEVIIAHKSTMIAENDRVIIFVNDKKQIDEIEKL
                     FQLGVFFL"
     gene            complement(2288..3619)
                     /gene="rsmB"
                     /locus_tag="PXB09_001109"
     CDS             complement(2288..3619)
                     /gene="rsmB"
                     /locus_tag="PXB09_001109"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDL5233242.1"
                     /translation="MKKQSFKALSSRAISATIILQVLDQGKSLSTLIPDAQKQLEPKD
                     LPLVQEITFGVCRVLPRLESIIKLLVEKPLKGKTRLVHCLLLVGLYQLLYMRVPAHAA
                     VDEVVNATKTLKLDSFRALTNGVLRRFLREQEEILAKVDKHWQTLHPEWLVNKLKKAY
                     PNWREIVEANNQRPPMWIRVNQQHIKTNDYAALISELVEPEFAKNSENPTACVPKCAL
                     LLERAVNVNQLPHFEQGWATVQDAHAQWSAELLGAENGETVLDACAAPGGKTTHILEK
                     APKAKVMALDIEESRLSRVRENLVRLGQIAQVICGDASKPEEWLEEGVLFDRILLDAP
                     CSATGVIRRHPDIKWLRKEGDIAELATLQGEILKALWQRLKPNGILLYATCSVLPQEN
                     SEQIQRFLQDTPNAKQLEIDFNGEKVLEKQFFPQPNGGDGFFYAKLQKVAE"
     gene            complement(3671..4096)
                     /locus_tag="PXB09_001110"
     CDS             complement(3671..4096)
                     /locus_tag="PXB09_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5233243.1"
                     /translation="MYNKLLIAIDLADLKSAKYVVDTALQMTAKNPNAVYRVVSIIEP
                     VDNSLISAFLPKNFDKEVVAEANQKLHEFTKNHFPEGSKVQHIVAYGTIYEEICRIAD
                     EKSVDLIMMLASSKPNAKGLSSNTVKVARNTTKPILVLR"
     gene            complement(4189..6837)
                     /locus_tag="PXB09_001111"
     CDS             complement(4189..6837)
                     /locus_tag="PXB09_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HDL5233244.1"
                     /translation="MSVESKVDYDDLQDMVASNDSGGRTPSGLAKKAIVYVAILWSVF
                     QIYYASPLPFVFQEWLTHAGINLNVVVDDTKARSIHLAFAMFLAFLSYPAFASSPKHH
                     IPKIDWVFAIVGAGLALYYIFFYEGLVKRFGAPNTQDIIAGCLGILLVLEATRRSLGL
                     PLVIIAIVFLIYNFFGQYFPADWIVSHRSGSLSQIINQQWITTEGVFGVALGVSTKYV
                     FLFVLFGALLDKAGAGNYFIKTAFAYLGHLRGGPAKAAVVSSALTGLISGSSIANVVT
                     TGTFTIPMMKRVGFTKEKAGAVEVASSVNGQIMPPVMGAAAFLMIEYVNMPYSQLITH
                     AFLPALISYIALVYIVHLEACKMNLQGLPRAEEPSPILVFLLRTVASILVIVGLAIGV
                     YYGLGWIRDVAEDYAFMIVCAFLGLWYLLAIRRVASYPDLEADDPNSEIVSLPKRKPT
                     VNAGLHYLIPVVVLLWCLMVEMLSPGLSAFWGTITLIFIQLTQRPLLNFFRKESVTKE
                     IIKQGVRDVVDSLEAGGRNMTGIALATATAGIIVGVVALTGFGVQLSSVIELLSMGNI
                     VLMLILVAVFSLILGMGLPTTANYIVVSSLMATVIMEVGRQNGLIVPLIAVHLFVFYF
                     GIMADVTPPVGLASFAAAAISGGSPINTGMVAFKYSLRTVILPFLFIFNTDLLLIDLR
                     YPGHGWVVFITATVGVLAFTSATMQYIVTKNKWWETALLVVAAFALFRPGFFMDRIYP
                     SERHIEPVQFEEQLLASKVGQNVTLKVEGLNPYGKEIEFYAQLPVPEGATGEERLKNL
                     GLTLIQTDEKIKVDGVETPKVVIDMVEMDSPAAKAGLNWDQTIHYIAVPQDAPSKDWI
                     FIPALLLVFGIVANQRRRVKKQCVIA"
     gene            complement(7039..8001)
                     /locus_tag="PXB09_001112"
     CDS             complement(7039..8001)
                     /locus_tag="PXB09_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HDL5233245.1"
                     /translation="MKKLVKLSFLASLVMGTASVQAAETFVTIGTGGQTGVYYVVGQS
                     ICQLVNRDSAKTGLKCNAPSTGASVANLNAIAAKEMDMGIAQSDWQYHAYNGSSSFEG
                     KKNDKIRAIFSLHPEPFTVMARTDSGIKSFDDLKAKRVNVGDPGSGTRATMNVILAAK
                     GWTDKDFKVASELKPAEMASVMCDNNLDAITYNVGHPNGALKEAAASCDAKLVPVTGP
                     EIDKLVADHSYYAKATIPGGLYKGSDEPTETFGVYATLVTSADVDADKVYNVTKAVFD
                     NFDRFKRLHPAFEHLKQEEMIKNALSAPLHEGAIRYYKEKGWIK"
     gene            complement(8185..10032)
                     /gene="selB"
                     /locus_tag="PXB09_001113"
     CDS             complement(8185..10032)
                     /gene="selB"
                     /locus_tag="PXB09_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDL5233246.1"
                     /translation="MIICTAGHVDHGKTSLLQALTGTNTAHLPEEQKRGLTIDLGYAY
                     LPIENDILGFIDVPGHQRFLSNMLAGLGGIQHALLVISAEEGIKPQTEEHLDILHLLN
                     FQHIMIVITKADRAEETQISHLIEQVKTSYPFLAEAKTFVTSAKTQQGIEELKAHLIQ
                     LNQQHTQTHKPFRYAIDRVFNVKGAGLVVTGTTVAGKVSVGSELFLSNGKKVRVKAIH
                     AQNTPSETGVAGQRLALNIANVEKEEIKRGDWITELEPKFATDRITVQLTANQAFKEN
                     SIVHLYHFASHITGKLNLLEGQQAVKNQQFFAEVILDEPLHIAVGDKLIIRSGDDSLT
                     LAGAEVLEIHSPKRHKRTEARLALVKNLAKTTACNDFATRLDLYLQNRAMDLSLLLWA
                     EQCFAEDIAKLGFDVSSKWLFNSDFKAQAQQRVLEKMAEYHLQHQDQIGVTKARLYRI
                     ALLDLPENLANQFIEDLVEQKALVNSRGWLHLPEHRIELNADELQIWQQIRPLFEATN
                     QALWVRDIASQLSIDETQMRNLLYKVGKLGYLIPIVKDRFLLSEQIGQFATLIKDFIA
                     QNGSISVNQLRDELQYGRKLTVQLIEYFDRSGFLRRKGDVHLLRDSETF"
     gene            complement(10042..10338)
                     /locus_tag="PXB09_001114"
     CDS             complement(10042..10338)
                     /locus_tag="PXB09_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5233247.1"
                     /translation="MMKFDYNIVWLQKAEIKLFYQADYILQQSQNPIIAEQFYDAIKS
                     EVDKLSFTADVYRLRKKKEIPILNGKYQVKFLIGQENVYIVDFKSARQNSYSFL"
     gene            complement(10335..10511)
                     /locus_tag="PXB09_001115"
     CDS             complement(10335..10511)
                     /locus_tag="PXB09_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233248.1"
                     /translation="MELILAQDLAKLRTDKPQSFYTNDELDLLHQLENGLIETKSHAQ
                     VMEDLRKKLGITEK"
     gene            complement(10580..11212)
                     /gene="pdxH"
                     /locus_tag="PXB09_001116"
     CDS             complement(10580..11212)
                     /gene="pdxH"
                     /locus_tag="PXB09_001116"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005575912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDL5233249.1"
                     /translation="MDLHHIREDYTKKVLSIRDCHSNPITQFEQWLSEAINAKVNEPT
                     AMNIATVAANGRPSSRMVLLKEVNSQGFVFFTNYQSRKGWEIADNPFGCLTFFWAELQ
                     RQVRIEGKIAKIPEAESDAYFDSRPYTSRLGAWASEQSQPIENYKALLLKSAQFALKY
                     PLSVPRPPHWGGYILIPDSIELWQGRSSRLHDRIHYWLENNEWKKERLSP"
     gene            complement(11270..12652)
                     /locus_tag="PXB09_001117"
     CDS             complement(11270..12652)
                     /locus_tag="PXB09_001117"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDL5233250.1"
                     /translation="MQQLFRQIPSLDLLLKKPQAVELCQKFAYSSVAEQARSLLTQAR
                     QFISQQQALPDFIADENLFFIRLEQKVQALSEVKIRSVFNLTGTVLHTNLGRGLWSEK
                     AIQAATNAMRNNVALEFDIEAGKRSHRDNYISELLQILTGAEAACIVNNNAAAVLLML
                     ATFAQGKEVIVSRGELVEIGGAFRIPDIMAQAGCKLVEVGTTNRTHLKDYRNAITENT
                     AFLMKVHTSNYHIEGFTSSVSEEELVALGKEFNLPVITDLGSGSLTDMQALNLPAEPK
                     VQQKVAAGVDLVSFSGDKLLGGPQAGIIVGSQAMISQLQQHPLKRVLRCDKVILSALE
                     ATLRHYLFPEQLTDNLPTLHLLTQPLETLQHKAERLKQALHKRLNSAYILQIELSLAQ
                     IGSGALPTETLPSVAVTISAEKQSDLIALEQQFKTYPSPIIGRFAQQKFWLDLRSVAE
                     FDKLIEMLEY"
     gene            12720..12814
                     /locus_tag="PXB09_001118"
     tRNA            12720..12814
                     /locus_tag="PXB09_001118"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12754..12756,aa:Sec,seq:tca)
     gene            13021..13710
                     /locus_tag="PXB09_001119"
     CDS             13021..13710
                     /locus_tag="PXB09_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDL5233251.1"
                     /translation="MSTLSRDSILSQIQNGLIASCQPVDDGPMDKPEIVAAMAAASVI
                     GGAKGIRIEGVDNLKAARAAVNVPIIGIVKRDLPDSPVRITPFLEDIDALAEAGADII
                     AVDGTFRTRPVSIEEAVKRIHEKGCLAMADCSTLEEGLHCQQLGFDIVGSTMSGYTGG
                     EMPDEPDYQLVKDLKAAGCNVMAEGRYNTPELAKTAIEIGADYVTVGSALTRLEHIVS
                     WFADSVKSAQK"
     gene            13720..14622
                     /locus_tag="PXB09_001120"
     CDS             13720..14622
                     /locus_tag="PXB09_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDL5233252.1"
                     /translation="MRCLAIDIGGTKIATAIVQHNQVSQRQQIQTPTDKPQADQAGSL
                     HQAIGEIMQHYQGQFDFVAVASTGIINKGVLTALNPKNLGGLAEFPLKQSIEKHTDKP
                     IALLNDVQAAVCAEYLNEDQQAVKNFVFITVSTGVGGGIILNGELQIGSNGIAGHIGH
                     TLADPNGPLCGCGRVGCVEAVAAGRAIEAVSSQWEKPCSPKEVFERFRQGNPQAVELV
                     QKSAKAIANLIADLKISLDIQKVVLGGSVGLAEGYLPQVSNYLAEMPSVYHCVLENAL
                     SGQDAGLIGAAWWAENQLNQGFTL"
     gene            14647..15525
                     /gene="nanA"
                     /locus_tag="PXB09_001121"
     CDS             14647..15525
                     /gene="nanA"
                     /locus_tag="PXB09_001121"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDL5233253.1"
                     /translation="MKNLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYV
                     GGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVGSVNLKEAVELGKYATELGYDS
                     LSAVTPFYYKFSFPEIKNFYETIIRETGNKMIVYSIPFLTGVNIGVSQFAELFENEKI
                     IGVKFTAGDFYLLERLRKAFPNHLIYAGFDEMMLPATVLGVDGAIGSTFNVNGIRARQ
                     IFELAQQGKIKEAFEIQNVTNDLIEGILGNGLYQTIKGLLELEGVQAGYCREPMTKEQ
                     TPAQKEVTKQLKAKFL"
     gene            complement(15586..15792)
                     /locus_tag="PXB09_001122"
     CDS             complement(15586..15792)
                     /locus_tag="PXB09_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233254.1"
                     /translation="MDNKQTNGFNDIIVKADITQNIWSTGFYDIGRELKSENTRQEKV
                     RLKYNGDTLHRGRKSRMASLIASR"
     gene            complement(15750..16388)
                     /locus_tag="PXB09_001123"
     CDS             complement(15750..16388)
                     /locus_tag="PXB09_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233255.1"
                     /translation="MKKILLLVLLLTLATQADEGNNTQVCAEQQHQIIAHYFKISQEK
                     LSARTLASACKTAPNNSTETLVSYAVIEPKYSKENYQNDENTPKWTLFVARVNDNAIL
                     QSWEQDMEIDASIDVNADSLKIDTARYILNDKVRAFGVRFNNAARGPSAPEYSANDHL
                     MLFVPEKEKLKLVFDYPMTFWSILDDKETKTETQTWYCKWITNRPTASMILL"
     gene            complement(16630..17349)
                     /locus_tag="PXB09_001124"
     CDS             complement(16630..17349)
                     /locus_tag="PXB09_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5233256.1"
                     /translation="MSKPNIYDESFSERMKWIAKNSFKDNYSEFARAVGVAQASLSRW
                     VKGEADPSRSNLVKIAEVSNVSLEWLATGKESKPQSENTSIVAREFERLEKMADDIVS
                     MINSFRTINVSAGFGSFNEGVTKPDGQEPYADSLLQSLGVKAHNCGVFWANGTSMHPT
                     IADSDQMLVDFSKREPRGDDKIYLVQNGESVWVKRIRKEWDYIELISDNESYRPIQIT
                     AEEAQNLQIIGQVVHIGHSLV"
     gene            17526..17804
                     /locus_tag="PXB09_001125"
     CDS             17526..17804
                     /locus_tag="PXB09_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5233257.1"
                     /translation="MSVLNDVKKTAQRDWHKADILAELRKKGWSLRSLAKAGNVSHNT
                     LKSVLDKPYPKMERLVANAIGVAPEVIWAGRTAERIERNRRPTLTNKF"
     gene            17849..>18616
                     /locus_tag="PXB09_001126"
     CDS             17849..>18616
                     /locus_tag="PXB09_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5233258.1"
                     /translation="MSELSLKTHYSVAELLSFKLSSLPSAHKNVLEKAIRENWQSQKR
                     KGRGGGVEYELISLPTEVQQEIRTKLLKLLPAEISKGELSVVRQNIDLEQITDKQLST
                     ADARIMVVRWFLMQEVQLGLSRTKTLDQVIAAVASSEIPAEICKAIMAGNSKAGGKLK
                     LSKRTLHSWVLAYEAGENSAERLKQMIPLKTQKRAVPERCGWLQAFLPFYQTFSNVAL
                     TQAYAQFAMQYEGEDLPTESQVRYALKQLPDYVVQQGR"
BASE COUNT         5330 a         4120 c         3782 g         5384 t
ORIGIN      
        1 ctctttttgg ctaattaatt tgcaatttaa attaattgag tgcagaatgc cattagcctt
       61 ttttgaaatc acattccata aaatggcttg attaacacaa cacaattatc actcaaatta
      121 ggattttcat tatgagtatt ttccaacaaa ccaatccaaa ccgccgtcgt tatgggctag
      181 ctgtatttat cgggattatt gccggtatta tttcagcatt cgtaaaatgg ggggcagaac
      241 atcctttccc acctcgtagc cctatcgatc tgtttaccgc tgcttgcccg caacctgtgt
      301 tagatgcaat gaatgccgca gcagaccaag tggctgccaa aaccatcgca ttacaagaat
      361 gttcacgtgc atttttaaac ccaccacacg ttttcttacg tgattatatt ggtatcgatc
      421 caactgaagc agcatttacc tttgctgacc acgcgttcaa ctggattggt gtcacccata
      481 tgattttctc gttagtcttt gcgattggtt actgcattgt ggcggaaatc ttcccaaaaa
      541 ttaaattctg gcaaggtatc ggtgccggta tcatcgctaa tatttgtgtt cactacatca
      601 ccttcccggc attaggttta acaccaccgg ttgctgaatg gccgttatat gaacacattt
      661 ctgaattagt tggtcatatt ttctggttct ggaccattga ggtgattcgt cgcgatttac
      721 gtaaccgtat tacgcgtgaa cctgatgccg aagtgccgtt agatcaaccg ttccgttaat
      781 ttaaaattag ctcgatttat acaaaagccg caatcacgtt gcggctttct tattttacaa
      841 gcggtcaaat tttcatgaaa atttaccaaa caaaaagcac attgtttcat gtagcaatgc
      901 ggagcttggc tttataagaa aaatacacca agttggaaca gtttttcaat ttcatcgatc
      961 tgtttcttat cgttcacaaa aataatcaca cggtcatttt ctgcaatcat ggtggatttg
     1021 tgggcgataa taacttcttc gcctcgcacc accgccccaa caattgcccc ttgcggtagt
     1081 tttaattcac ggatttgtcg tccaaccact tttgaagtgg ttgcatcgcc gtgagcgata
     1141 atttctaccg ctcctgcaac cccaagtttg agtgaagaaa cttgtaaaat atcgcctttt
     1201 ctaacgtaac tagcgagagc agaaatagta gcttgttgtg gggaaatggc aatatcaata
     1261 gtgccacctt gaatcaggtg taaataggca gggcgttgca ctaaaataat cacttttttc
     1321 gccccaagcc gttttgccag cagggcggac ataatattcg cttcatcatc actggtgacg
     1381 gcaaggaata aatcaatatt ctcaatatgc tcctcaaaca gcaactcttc atcggaggca
     1441 tcaccggtaa gcaccatcgt tttagatagt ttttctgcta atttttcggc tcgaaccgga
     1501 ttgcgttcga taatttttac ccgatactga tcttctaaat cccgagctaa cgaagagccg
     1561 atgctccctc caccgacaat cataatccgc ttatgtgggc gatcaagccg ttgtagttca
     1621 ctcattactg ctcgaatatg ttgggttgca cagatgaaaa agacttcatc acctgcctca
     1681 ataatagttg aaccttgtgg cacaatcgct ttgtcttggc ggaaaattgc cacgacccga
     1741 gcatcaatat gcggtaaatg atcacgcagg gctgaaatcg ggtaaccgac caaaggccca
     1801 ccgtaatagg cttttacatt cacgatactg actaactcat cagcaaaatg agtaatttgc
     1861 aacgcccccg gatagtgaat aaggcgtaaa atatcttctt tgactaaaat ttcaggggca
     1921 ataatatggt caataggcaa tacatcatca ttaaacaacc gctctcgttc tctcacataa
     1981 tcagcactgc gaatacgggc aattttggtc ggcacattaa ataaagtgta agcaatttgg
     2041 caagcgatca tattcacttc atcactatta gttacagcaa ctaatagatc agcatcacct
     2101 gcaccggcat cacgcaaggt ttgaggtgaa gcatattcgc cccgaatcac ctgtaaatcg
     2161 tgtttatctt tgagcttgtc taaacgagtt gggtcattat ccaccaagac aatatcattg
     2221 tcttcactca ccaaattttc tgccagcgta gaaccaactt gtcctgcccc taaaataatt
     2281 actttcatta ctctgctact ttttgtagtt ttgcgtagaa gaaaccatca ccaccgtttg
     2341 gttgtgggaa gaactgtttt tctaacactt tttcgccgtt aaaatcgatt tcaagttgtt
     2401 ttgcattcgg tgtatcttgt aaaaaccgtt gaatttgctc gctattttct tgcggtaaca
     2461 ccgagcaagt ggcatataac aaaatgccgt ttggctttaa cctttgccat aacgccttga
     2521 gaatctcacc ctgtaatgtg gctaattctg caatatcacc ctctttacgc aaccatttaa
     2581 tatcagggtg gcggcgaatg actccggttg cggaacaagg ggcatcaagt aaaatgcggt
     2641 caaacagcac accctcttca agccattcct caggtttgga agcatcgcca caaattacct
     2701 gtgcaatctg ccccagtcgg actaagtttt cacgcactcg gcttaaacgg ctctcttcaa
     2761 tatccaacgc cataaccttt gctttcggtg ctttttctaa aatatgggta gttttgccac
     2821 ccggtgcggc acaggcatct aaaacggttt caccattttc tgccccgagc aactccgctg
     2881 accattgtgc gtgagcatct tgcacggttg cccaaccttg ctcgaaatgt ggcagttggt
     2941 tcacatttac cgctctctcc agcaataaag cacactttgg cacgcaagcg gtcggatttt
     3001 ctgaattttt tgcaaattca ggctcaacca gctcgctaat caacgccgca taatcattgg
     3061 tcttgatatg ttgttgattg actcgaatcc acattggtgg gcgttggttg tttgcttcaa
     3121 caatttctcg ccagttcgga taggcttttt taagtttatt gaccaaccat tcagggtgga
     3181 gcgtttgcca atgtttatct accttcgcta agatttcttc ttgctctcgc agaaaacggc
     3241 gtagcacacc gttagtcaag gctcggaagc tatccagttt tagcgtttta gttgcattca
     3301 ctacctcatc aaccgcagcg tgtgccggca ctcgcatata aagcagttgg tataaaccca
     3361 ctaacagtaa gcaatgcacc aaacgggttt tgcctttcag cggtttttca actaataatt
     3421 tgatgatcga ttccaagcga ggcagcacac ggcacactcc gaaggtgatt tcttgcacta
     3481 agggtaaatc ttttggttca agctgttttt gagcgtcagg aatcaaggtg gaaagtgatt
     3541 taccttgatc taacacctgt aaaataatgg ttgcacttat tgctctagaa gaaagtgctt
     3601 tgaacgattg ttttttcata aataaaaatg ccattccgac agaatggcac tattgtaact
     3661 gaatgcggga ttatcttaaa actaaaattg gcttggtggt gttgcgagcc actttaaccg
     3721 tattagagct taagcccttc gcatttggtt tgctgcttgc cagcatcata attaaatcca
     3781 ccgacttttc atcggcaata cggcaaattt cttcataaat cgtaccatac gccacaatgt
     3841 gctgcacttt tgaaccttca ggaaaatggt ttttggtaaa ttcgtgcaat ttttggtttg
     3901 cttcagccac cacttcttta tcgaaatttt tcggcaagaa tgcagaaatt aagctgttat
     3961 ccaccggctc aataatagac acaacccgat aaaccgcatt cggatttttt gccgtcattt
     4021 gtaatgccgt atctaccaca tatttagcac tttttaggtc ggctaaatca atcgcaataa
     4081 gtaatttgtt atacatattt attccgtagg ggcaggtcct gtgcctgccc gaatattaac
     4141 taaaatagcg gacgggcaca ggacccgtcc ctacatagca tataaatact atgcaataac
     4201 acactgtttt ttcactctac ggcgttggtt tgccacaata ccaaatacca acaatagagc
     4261 aggaatgaag atccaatctt tagaaggagc atcttgcggt acggcaatgt agtgaatggt
     4321 ttgatcccag tttaagcctg ctttagctgc cggagaatcc atttctacca tatcaatcac
     4381 cacttttggt gtttctacgc catcaacttt gattttttca tcggtttgaa ttagcgttaa
     4441 gcctaagttt ttcaaacgct cttcgccggt tgctccttcc ggtacaggta attgagcgta
     4501 gaactcaatt tctttaccgt aagggtttaa tccctctact tttaaagtaa cattttgacc
     4561 tactttgctt gcaagcaact gttcttcaaa ctgcaccggc tcgatatgac gttcagacgg
     4621 ataaattctg tccataaaga agcccggacg gaacaaggcg aaagcggcta caaccagcaa
     4681 cgccgtttcc caccatttgt ttttagtcac aatatattgc attgtagcag aggtaaaggc
     4741 gagaacccca acagttgcgg taataaacac aacccagccg tgccccggat aacgcagatc
     4801 aattaataat aaatcggtat taaaaataaa taagaacggt aaaatgacgg ttcttaaact
     4861 atatttaaat gccaccatac cggtattaat cgggctaccg cctgaaattg ctgccgcagc
     4921 gaacgaggct aaaccaacag gtggagtcac atctgccata atcccaaaat agaatacgaa
     4981 taaatgcacc gcaatcaacg gcacgattaa cccgttttga cgaccgactt ccatgataac
     5041 cgttgccatt aatgatgaca ccacaatgta gtttgcagtt gtcggtaagc ccattcccaa
     5101 aattaagctg aatacggcta ccaagatcaa cattagcaca atgttgccca ttgataggag
     5161 ttcaatcaca cttgaaagct gaaccccaaa gcccgttagt gccacaacgc cgacaataat
     5221 ccctgctgtt gcggtagcga gggcgatacc ggtcatatta cgaccgccag cctcaaggct
     5281 atctaccaca tctcgaacac cttgtttgat aatctctttg gttacgctct ctttacggaa
     5341 gaaattcagt aacgggcgtt gggttaattg aataaaaatt aaggtaatgg ttccccagaa
     5401 tgcggataag cccggcgaaa gcatttccac cattaagcac caaagtagca caaccacagg
     5461 aataaggtaa tgtaaacctg catttacggt tggttttctt tttggtagag aaacaatttc
     5521 tgagtttgga tcgtccgctt ctaaatcagg gtagcttgcc acacggcgaa tagccagtag
     5581 ataccataag cctaagaaag cacagacaat cataaacgca taatcttctg ccacatcacg
     5641 aatccaacct aagccgtagt aaacgccaat cgctaatcct acgatcacta aaattgaagc
     5701 tacggttctt agcaagaaga ctaaaatcgg gcttggctct tcggctcttg gtaagccttg
     5761 taaattcatc ttacaagctt ctaaatgcac gatatacacc aacgcaatat acgaaattaa
     5821 cgcaggtaag aaggcgtgag taatcagctg gctatacggc atattcacat attcgatcat
     5881 caagaacgct gcagccccca ttaccggtgg cataatttga ccgtttactg atgaggcaac
     5941 ttccaccgca ccggcttttt ctttggtaaa gccgacccgt ttcatcattg gaatagtgaa
     6001 tgtacctgtc gtcacgacgt ttgcaatcga agagcctgaa atcaagccgg ttaaagcgga
     6061 agaaaccacc gccgcttttg ccggaccacc acgcaaatgc cctaaatagg caaaggcggt
     6121 tttaataaag tagttacctg ctcctgcttt atcgagcaac gccccaaata atacgaacag
     6181 gaacacatat ttggtcgaaa ccccaagggc tacaccaaac acgccttcag tggtaatcca
     6241 ttgttggttg ataatttgag aaagcgaacc tgagcggtgg cttacaatcc aatctgccgg
     6301 gaaatattgc ccgaagaagt tatagatcag gaatacaatc gcaataatca caagcggtaa
     6361 gccaagacta cggcgggtcg cttccagcac caataaaatc cctaaacagc cggcgataat
     6421 atcttgcgta tttggcgctc caaaacgttt caccaaacct tcatagaaga aaatataata
     6481 caacgctaac ccagctccta cgatggcaaa cacccaatct attttaggaa tatgatgttt
     6541 aggcgagctg gcaaaagcag ggtaagatag gaacgccaag aacattgcaa aggctaagtg
     6601 gatagaacgg gctttggtgt cgtccaccac cacattcaaa ttaatgcctg cgtgagtaag
     6661 ccattcttgg aatacaaacg gcaatggaga agcataataa atttggaaca cagaccaaag
     6721 aatggcgaca tacacaatgg cttttttcgc aagaccggac ggggttcgcc ccccactgtc
     6781 attggaggca accatatctt gtaggtcatc gtaatcaacc ttagattcaa ctgacataaa
     6841 gactcctcaa aacgcaagcg gtcattttct tattaaattt tacaaatttc ctcaaaaaac
     6901 aaccgcttgc tcgtgaaaac actgttgata agttatcaat taaaggtgaa aatcgataac
     6961 ttatcaacag tttcaaaaaa gcaaaaaacc agcacgctaa aaaacgtgct gattgaatca
     7021 aattacagaa aggaaatatt acttaatcca acctttctct ttatagtaac gaattgcacc
     7081 ttcgtgtaac ggagcagaaa gggcgttttt gatcatctct tcttgtttta agtgttcaaa
     7141 cgccggatgt aaacgtttga aacggtcgaa gttatcaaat accgctttgg ttacattgta
     7201 cactttatct gcatccacat cggcagaagt cactaacgtt gcatatacac cgaaggtttc
     7261 tgtcggctca tccgaacctt tatataaacc gcccggaatc gtagctttgg cataatatga
     7321 gtgatctgcc actaatttat caatttcagg gccggttacc ggcactaatt tcgcatcgca
     7381 agaagcggct gcttctttta acgcaccatt cgggtgacct acgttataag tgatggcatc
     7441 taagttgtta tcacacatta cagatgccat ttctgccggt ttcaattcag aagccacttt
     7501 gaaatcttta tccgtccagc cttttgccgc taaaatcacg ttcattgttg cacgagtacc
     7561 ggaacccggg tcgcccacgt ttacacgttt tgcttttaaa tcatcgaacg atttaatgcc
     7621 tgaatcggta cgagccatta ctgtaaacgg ttccgggtga agcgagaaaa tggcacgaat
     7681 tttatcgttt ttcttacctt caaatgagct tgagccgtta taggcgtggt attgccagtc
     7741 tgattgtgca atccccatat ccatttcttt tgctgcaatc gcatttaagt ttgcaaccga
     7801 tgcccctgtt gaaggagcgt tacattttaa acctgttttt gctgaatcac ggtttactaa
     7861 ttggcaaata gattgaccca caacataata aacaccggtt tgaccgcctg ttccgatagt
     7921 cacaaatgtt tcagccgctt gaacagatgc tgttcccatc acaaggcttg caaggaaaga
     7981 aagtttgact aattttttca tttttaactc ctaaaattaa ggatcagaaa acaaagattt
     8041 attgttttga gccactgctc acactacaag agatacaaaa cttctttgag ttgcatttgc
     8101 ctcttagagc ttgtttttag catagatttt ataattagta aatttatttt ttcgcataaa
     8161 aaaatctatg cctaatgcca caagctaaaa tgtttcacta tctcttaaca aatgcacatc
     8221 gccttttcgt cttaaaaaac cgctacgatc aaaatattca attaattgta ccgtcaattt
     8281 tcgcccatac tgcaactcat ctcgcaactg gttcaccgaa atgctgccgt tttgggcgat
     8341 aaaatcttta attaacgttg caaattgccc gatttgttcg cttaataaaa atctatcttt
     8401 gacgattggg attaaatagc ccaatttccc gactttatac agcaaattcc gcatttgggt
     8461 ttcatcaatc gagagctggc ttgcaatatc cctcacccaa agagcttgat tggttgcctc
     8521 aaacagcggt cgaatttgtt gccaaatttg caattcatcg gcgttcaatt cgattcgatg
     8581 ttccggcaaa tgtaaccaac cacgactatt gaccaaggct ttttgctcca ccaaatcctc
     8641 aataaattga tttgccaagt tttcaggcaa atccaataac gctatgcgat ataaacgagc
     8701 tttggtcacg ccgatttgat cttgatgttg caggtggtat tctgccattt tttccaacac
     8761 ccgttgctgg gcttgagctt taaaatccga attaaataac catttagacg agacatcaaa
     8821 ccccagtttt gcaatatcct ctgcaaaaca ttgctccgcc cataacagca aggataaatc
     8881 catcgctctg ttttgcagat agagatcaag gcgtgtcgca aagtcattac aagcggtggt
     8941 ttttgctaaa ttttttacca aagctaaacg ggcttcggta cgtttatgcc gttttggtga
     9001 gtgaatttcc agcacctccg ctccggctaa cgttaggctg tcatcaccgc tgcggatgat
     9061 caacttatca ccaacggcaa tatgaagtgg ttcatctaaa atcacttctg caaaaaattg
     9121 ctgatttttg accgcttgtt gcccctcaag caaattcaat ttgccggtaa tgtgcgaagc
     9181 aaaatggtaa agatgcacaa tgctgttttc tttgaaggct tgattggcag tgagttgaac
     9241 cgtaatgcga tcggtggcaa atttcggctc aagctcggta atccaatcgc ctcgcttgat
     9301 ttcctctttt tccacgttag cgatatttaa cgccaaacgt tgccctgcca ctcccgtttc
     9361 cgaaggcgta ttttgggcgt gaatcgcttt gacccgcact tttttaccat tcgacaaaaa
     9421 taactcagag ccaacgctca cttttcccgc caccgttgtg ccggtaacga ccaaccctgc
     9481 tcctttcaca ttaaacacac ggtcaatcgc ataacggaac ggtttatggg tttgggtatg
     9541 ttgttgattt aattgaatta aatgtgcttt taattcttca atcccttgtt gcgtttttgc
     9601 cgaagtaaca aaggtttttg cttccgctaa aaacggatag cttgttttca cttgctcaat
     9661 taagtggctg atttgagttt cttccgcccg atctgcctta gtaatcacaa tcataatatg
     9721 ctggaaattc agcaggtgga gaatatccaa atgctcttcg gtttgtggct taatcccttc
     9781 ttcggcagaa atcaccaaca gggcgtgttg aatgccgcca agccctgcca gcatattaga
     9841 taaaaaacgc tgatgacccg gcacatcaat aaaccctaaa atatcgttct caatcggtaa
     9901 ataggcatag cccaaatcaa tggttagccc acgtttttgt tcttcgggca aatgggcggt
     9961 gttagtgccg gttaaggctt gtaaaagcga tgttttgccg tggtcaacgt gaccggcggt
    10021 gcagatgatc attgatagtc cttataaaaa tgagtaacta ttctggcgag cagatttaaa
    10081 atctacaata tagacatttt cctgaccaat caggaacttt acttggtact taccgtttaa
    10141 aatgggaatt tcttttttct tgcgaagtcg ataaacatcg gcagtaaagg aaagtttatc
    10201 cacttcactt tttattgcat cataaaattg ttctgcaata atcgggtttt gggattgttg
    10261 taatatataa tctgcttgat aaaacaattt tatttctgct ttctgtagcc aaacaatatt
    10321 gtaatcaaac ttcatcattt ttccgtgatt cccaattttt tgcgtaaatc ttccatcacc
    10381 tgagcgtggg atttagtttc aattaagcca ttttctaatt gatgtaataa atcaagttca
    10441 tcattagtat aaaaactttg tggcttatct gtgcgtaatt ttgctaaatc ttgtgcgagt
    10501 atgagttcca tatttccccc ttacaaactt agattattca atattgtaac ctgataaaac
    10561 taaagttcaa ggagtgtatt taaggcgata accgctcttt tttccactca ttattttcca
    10621 accaataatg aatgcggtcg tgtagccggc tacttctgcc ttgccagagt tcaatactgt
    10681 cgggaatcag aatatagcca ccccaatgcg gtgggcgagg cactgaaagt ggatatttca
    10741 atgcaaattg agctgatttt agcaacaaag ccttgtagtt ttcgataggc tgactctgct
    10801 cgctcgccca agcccccaaa cggctggtgt aaggacgaga gtcaaaatag gcatcggatt
    10861 ctgcctctgg aatttttgct attttccctt caatccgcac ttgacgttgt aattctgccc
    10921 aaaagaaggt taaacatcca aaaggattat cggcaatttc ccacccttta cggctttgat
    10981 aattggtaaa gaacacaaag ccttgtgaat ttacctcttt caacagcacc attcggctac
    11041 ttggtcgccc gtttgctgca acggtagcaa tattcattgc tgtcggctca ttcactttgg
    11101 cattgattgc ctcactcaac cattgttcaa attgggtgat tgggtttgag tgacaatctc
    11161 ggattgaaag cacttttttg gtgtaatctt ctcgaatgtg gtgcagatcc ataaggattc
    11221 ctttatctta ttctaaataa tcggacaggc acagtctgcc ctaccaaaat taatattcca
    11281 acatctcaat caacttatca aactccgcga ccgagcgtaa atctaaccaa aatttctgct
    11341 gagcaaaacg cccgataatc gggcttgggt aggttttaaa ttgttgttcc aatgcaatta
    11401 aatcgctctg tttttcagcg gaaatagtca ctgccaccga aggtaaggtt tctgtgggta
    11461 acgcaccgct gccgatttga gcgaggctta gctcaatttg caaaatataa gcagaattta
    11521 accgcttgtg tagtgcctgt tttaatcgct ctgctttgtg ttgcaaggtt tcaagcggtt
    11581 gagtgagtaa atgaagagtc ggcaagttat cggttaattg ctccggaaat aagtagtggc
    11641 gtagcgttgc ctcaagtgcc gataaaatca ctttatcgca acgtagcacc cgttttagcg
    11701 ggtgttgttg cagttggcta atcatcgctt ggctaccgac aataatgccg gcttgcggcc
    11761 cgcctaataa tttatcgcca gagaaggaaa ccaaatctac cccagccgct actttttgct
    11821 gaacctttgg ctcagcaggc aaattaagag cttgcatatc agttagcgaa ccactgccta
    11881 agtcggtaat cacaggcagg ttaaactctt taccgagagc caccaattcc tcttccgaca
    11941 ccgaactggt gaacccctca atgtggtagt tactggtgtg aactttcatt aaaaaggcgg
    12001 tattttcggt gatcgcgttg cgataatcct ttaaatgagt gcgattagtc gtaccaactt
    12061 ccaccaattt gcaaccggct tgagccataa tatccggaat gcggaatgcc ccgccaattt
    12121 ccaccagctc gccacgggaa acgatgactt ccttgccttg tgcgaaggtt gctaacatca
    12181 acaacaccgc tgccgcatta ttattcacaa tgcaagcggc ctccgctccg gtaagtattt
    12241 gcaacaactc ggaaatgtag ttatctcggt gcgagcgctt gcctgcttca atatcaaatt
    12301 ccaacgccac attgtttcgc attgcgttgg ttgctgcctg tatcgccttt tccgaccaca
    12361 acccacgccc taagttggtg tgtaacaccg taccggttaa gttgaacacg gaacggattt
    12421 tcacctcact caacgcttgc actttttgtt ccagccttat aaaaaacagg ttttcatcgg
    12481 caataaaatc cggcaaggct tgctgttggg aaataaattg acgtgcttga gtaagcaaac
    12541 tcctagcttg ttcagccacg ctggaatatg caaatttttg gcataattcg accgcttgtg
    12601 gctttttcaa caagaggtcg agcgagggaa tttggcgaaa tagttgttgc ataatgtgaa
    12661 tgattgagag aatattttgg acaattctaa taaataaagt acaatattgc caatttttcg
    12721 gaagtgcgtc atctccggtg aggtggcagg acttcaaatc ctgttgagga cgccagcgtt
    12781 ctcgggtggg ttcaactccc atgcacttcc gccacatttc aaaagccgtt aatctttaac
    12841 ggctttttgc atttctgcca cattctctct ttccgttttg ataaaaaatg agacttagct
    12901 cacatttttt tatttttctg tttgtagtaa aaatttatta aattataatt atttggagta
    12961 ttttttcaca aacaaaatct agtccattga ctaccttttg aacataaaaa aggaactgtt
    13021 atgtcaacac tatctcgtga ttctatttta agtcaaattc aaaacgggct gattgcctcc
    13081 tgccaaccgg ttgatgacgg ccccatggat aaacctgaaa ttgtcgccgc aatggcagca
    13141 gcctctgtga ttggtggtgc taaaggcatt cgcattgaag gtgtcgataa tttaaaagcc
    13201 gctcgtgcgg cagtgaatgt gccgattatc ggcattgtaa aacgtgattt gccagattcc
    13261 cctgtgcgta ttacgccatt tttagaagat attgatgcct tagccgaagc cggtgccgat
    13321 attattgcgg tggacggcac attccgcacc cgcccggtca gcattgaaga ggcggtaaaa
    13381 cgcattcacg aaaaaggttg cttggcaatg gcggattgct ccacccttga agaaggttta
    13441 cattgccaac aattaggctt tgatattgtg ggtagtacaa tgtctggcta caccggtggc
    13501 gaaatgcctg atgagccgga ctatcaatta gtgaaagatt taaaagctgc cggctgtaat
    13561 gttatggcgg aaggtcgcta caacacgcct gaactggcaa aaacggcgat tgaaatcggg
    13621 gcggattacg ttaccgttgg atcggcattg acccgcttag agcatattgt gagctggttt
    13681 gccgactctg taaaatcggc tcaaaaatag gagctgctta tgcgttgttt agcaatagac
    13741 atcggtggca cgaaaattgc cacggcaatt gtgcaacaca atcaagtgtc acaacgccaa
    13801 caaattcaga ccccgactga taaaccacaa gctgatcagg caggcagttt gcatcaagcg
    13861 attggtgaga taatgcaaca ttatcaaggg caatttgatt ttgtggcagt tgcctcaaca
    13921 ggcattatca ataaaggggt gcttaccgca ttaaatccta aaaatttagg cggattggca
    13981 gaatttccgt tgaaacaaag cattgaaaaa cataccgata agccgattgc attattaaat
    14041 gacgtgcaag cggcggtgtg tgccgaatat ttaaatgaag accaacaagc ggtcaaaaat
    14101 tttgtattta ttaccgtttc caccggcgta ggcggcggca ttattttaaa cggcgaactg
    14161 caaatcggca gtaacggcat tgcaggacat atcgggcata ctctagccga tccgaacggg
    14221 cctctctgtg gttgtggacg agtcggctgt gtcgaagcag tcgcagcagg gcgtgcaata
    14281 gaggcagttt ccagccaatg ggaaaagcct tgttcaccga aagaggtgtt cgagcgattc
    14341 cgccaaggca acccacaagc ggtcgaatta gtacaaaaat ctgcaaaagc gattgctaat
    14401 ttaattgcag atttaaaaat cagtttagat atacaaaaag tggtgttagg tggcagtgtg
    14461 ggcttagcgg aagggtattt accgcaggtg tccaactatt tagctgaaat gccgagcgta
    14521 tatcattgcg tattggaaaa tgctctatcc gggcaagatg ccggcttaat cggtgcggct
    14581 tggtgggcgg aaaaccaact taatcaaggt tttactcttt aacaaattct aactccggag
    14641 atccaaatga aaaacttaaa aggtattttt agtgcgttac tcgtctcttt caacgaagac
    14701 ggcaccatca acgaaaaagg cttacgccaa attatccgcc acaacatcga caaaatgaaa
    14761 gtggacggtt tatatgtcgg cggttcaacc ggtgaaaact ttatgctttc taccgaagag
    14821 aaaaaagaaa ttttccgcat tgccaaagac gaagcgaaag atgaaatcgc ccttatcgcc
    14881 caagtcggta gcgtaaactt aaaagaggcg gtagaactgg gtaaatatgc cacagaatta
    14941 ggctacgaca gcttatctgc ggtcacaccg ttctactaca aattcagctt cccggaaatc
    15001 aaaaatttct acgaaaccat tattcgtgaa accggcaaca aaatgattgt ttactccatt
    15061 ccgttcttaa ccggcgtaaa catcggtgtg agccaattcg ctgaattatt tgaaaacgaa
    15121 aaaatcatcg gtgtaaaatt cactgccggc gatttctacc tgttagagcg tttacgcaaa
    15181 gcgttcccga accacttaat ctacgcaggt ttcgatgaaa tgatgctacc ggcaacggta
    15241 ttaggtgtgg acggtgcaat cggctcaacc ttcaacgtaa acggtattcg tgcaagacaa
    15301 atctttgaat tagcccaaca aggcaaaatc aaagaagcat ttgaaatcca aaatgtaacc
    15361 aacgatttaa tcgaaggcat tttaggcaac ggtttatacc aaaccatcaa aggcttattg
    15421 gagttagaag gtgtgcaagc aggttactgc cgtgagccga tgacgaaaga acaaactccg
    15481 gcacaaaaag aagtgaccaa acagttaaaa gctaaattct tgtaatttaa gttgcaaaag
    15541 gctaaacgaa aatcaccgct tgtagtaaca agcggtgatt ttttctcaac gacttgcaat
    15601 taatgaagcc attctgcttt ttctaccacg gtgtaacgtg tcaccattat attttaatcg
    15661 cactttttct tggcgagtat tttctgattt caactctcta cctatatcat aaaaccctgt
    15721 actccagata ttttgagtaa tatccgcttt tacaataata tcattgaagc cgttggtctg
    15781 tttgttatcc atttgcaata ccaagtttgt gtttccgttt tggtttcttt atcatctaaa
    15841 atagaccaaa aagtcatcgg gtaatcaaaa acaagtttta acttttcttt ttccggcaca
    15901 aataacatca aatgatcatt tgcagaatac tcaggagcac ttggaccacg agcagcatta
    15961 ttaaacctca cgccgaaagc tcttactttg tcgtttagaa tataacgggc ggtatcaatt
    16021 ttaagactat ctgcattcac atcgatagag gcatcgatct ccatatcctg ctcccacgat
    16081 tgcaatatcg cattatcatt cacacgagca acaaaaagcg tccacttagg tgtgttttcg
    16141 tcgttttgat aattttcttt gctgtattta ggctctatta ccgcataact cactaaggtt
    16201 tccgttgaat tgttaggagc tgttttacag gcagaagcta aagtacgagc agaaagtttc
    16261 tcttgagaaa tcttaaagta atgagcaata atttgatgtt gttgctcagc acaaacctgt
    16321 gtgttattac cttcatctgc ttgagttgca agcgtaagta aaagaactaa gaggagtatc
    16381 tttttcatat agatttatcc gtatagaaag ataactcatt ctatggggta ctgactcttt
    16441 ttgcatagag agaaagaaaa aaatttggtc gaaaaaataa cggcgagcct agcgaaaaca
    16501 agggttcgcc gtaattttat gggggaagct atgtaaaaaa caaaatgagc aggattagaa
    16561 aaaaatgagc agtttttgcg atattttttg cataggtttg atcggtttta aaactatttt
    16621 aaatctgttt taaactaaag agtgtccgat gtggactacc tgcccgatga tttggaggtt
    16681 ttgagcttct tcggcggtaa tctgtattgg gcggtaggac tcgttatcgc taattaattc
    16741 aatatagtcc cattcttttc taatccgttt aacccatacg ctttccccat tctgcacaag
    16801 ataaatctta tcatcaccac gaggctctcg tttgctgaaa tctaccagca tttggtcact
    16861 gtctgcaatg gtagggtgca ttgatgttcc atttgcccaa aacacgccgc agttgtgggc
    16921 ttttacgccg aggctttgca gcaggctgtc ggcgtaaggt tcttgcccgt ctggcttcgt
    16981 tacgccctcg ttaaagctgc caaagcctgc tgaaacgttg attgttctga agctgttaat
    17041 cattgaaaca atatcatcag ccattttttc tagtcgctca aactctcttg ccacaatact
    17101 ggtattctct gattgtggtt tgctttcctt acctgttgcc agccattcaa ggctcacatt
    17161 tgacacctct gctattttta caagatttga acgagatgga tctgcctctc cttttaccca
    17221 cctagatagt gatgcttggg ctacccccac tgctcttgca aactcactgt aattgtcctt
    17281 aaagctattt tttgcaatcc atttcattct ttctgagaag ctctcatcgt aaatgtttgg
    17341 tttactcatc ttttacgttt ccattaataa agttttactc gtaaaacata ctcataaacc
    17401 attgattttt aagttattta tgaataaagc aaaaatattt tagatgtttt tatgttttac
    17461 ggttgatttg tttaaagttt tacggttaaa tacacgcatc aaatagataa aaagaggtgt
    17521 atcgaatgag tgtattaaac gatgttaaaa aaaccgcaca gagagattgg cataaagccg
    17581 atattcttgc ggaacttcgt aaaaaaggtt ggtcacttcg ttctttggct aaagcaggca
    17641 atgttagcca taacacgctg aagtctgttt tagacaagcc ttaccccaaa atggaacgct
    17701 tagttgcaaa tgccataggg gttgcccctg aagtgatttg ggctgggcga acagcagaac
    17761 gcattgaacg taatcggcga ccaactttaa ctaataagtt ttaatcataa atgatcttta
    17821 acgtaaaaga tataggagaa gaacatttat gagcgaatta agtttaaaaa cgcactattc
    17881 agtggctgaa ttgttaagtt ttaagttatc tagcctacca agtgctcata aaaatgtgct
    17941 tgagaaagca ataagggaaa actggcaatc tcaaaaacgc aaaggcagag gcggcggggt
    18001 tgaatatgaa ttaatcagtt tacccaccga agtccaacag gaaatccgca ccaagttact
    18061 caaacttctt cctgctgaaa tcagcaaagg cgaattgagt gtagtgcgac aaaacattga
    18121 tttggagcag ataaccgata aacaactttc tacggcagat gctcgcatta tggtggtgcg
    18181 gtggttcttg atgcaggaag tgcagttggg gctaagccgc acaaaaacgc tagaccaagt
    18241 cattgcagcg gtggcaagca gtgaaattcc tgctgaaatt tgcaaagcga ttatggcggg
    18301 caatagtaaa gccggtggaa agttaaagct atctaaacgc accttgcata gttgggtgct
    18361 ggcgtatgag gcaggcgaaa attcagcgga acggttaaaa cagatgatac cgctgaaaac
    18421 acaaaaacgt gccgtgcccg agcggtgtgg ttggttgcaa gcctttctgc cgttttatca
    18481 aacctttagc aatgtggcac tcacacaggc ttatgctcaa tttgcaatgc agtatgaggg
    18541 cgaagattta cctacagaga gccaagttcg gtatgccttg aagcagttgc ccgattatgt
    18601 ggtgcaacaa gggcgg
//
LOCUS       DANLTI010000042        18598 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.042, whole genome shotgun sequence.
ACCESSION   DANLTI010000042 DANLTI010000000
VERSION     DANLTI010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18598
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.042"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(47..3322)
                     /locus_tag="PXB09_001127"
                     /pseudo
     CDS             complement(47..3322)
                     /locus_tag="PXB09_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431593.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
     gene            complement(3570..4289)
                     /locus_tag="PXB09_001128"
     CDS             complement(3570..4289)
                     /locus_tag="PXB09_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDL5233259.1"
                     /translation="MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRE
                     TGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKKPSSDTETHLELYRQFTDIGGVV
                     HTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
                     FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPM
                     QQELLDKHYLRKHGANAYYGQ"
     gene            complement(4286..5146)
                     /locus_tag="PXB09_001129"
     CDS             complement(4286..5146)
                     /locus_tag="PXB09_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDL5233260.1"
                     /translation="MRKHKLGIYEKALPKNISWQDRLSIAKVCGFDFVEMSIDETDER
                     LARLDWSKKERAKLVKTIINTGVTIPSMCLSGHRRFPFGSCDEATRQKAYEIMEKAIQ
                     LAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQQGLEWAVELAASNQVTIAVEIMDTQFM
                     SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTE
                     TCKGQFRDVPFGDGCVDFAACFKTLAELNYRGAFLIEMWTEKAEEPITEIINARRWIE
                     QKMQEGGFTL"
     gene            complement(5201..5947)
                     /gene="ulaR"
                     /locus_tag="PXB09_001130"
     CDS             complement(5201..5947)
                     /gene="ulaR"
                     /locus_tag="PXB09_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDL5233261.1"
                     /translation="MNESYRHKELLALLEERKALSTADIMQLLNISPATARRDISKLD
                     GQGKLKKVRNGAEAILAPTFLQHTKITNNAQEKRRIAEAAGRLCKDGESLILTCGSTM
                     EMLGEVLCGRKLQIITNYLPLANQLIAGCHDDVVIMGGQYNKHKKVMLSINTQNEMTY
                     AATTMFTSGKGLTSEGLFKTDMIIANAEQQMAKHAERYVVLLDSTKLGKKVGMLFKEF
                     DKIDLLITGKEADPTIIQALRNKGLDIILA"
     gene            complement(6031..7122)
                     /gene="ulaG"
                     /locus_tag="PXB09_001131"
     CDS             complement(6031..7122)
                     /gene="ulaG"
                     /locus_tag="PXB09_001131"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDL5233262.1"
                     /translation="MSKIQEITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     CVGVWIKTPAGANICMDLWCGRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVL
                     DPFAINEVDFILASHYHSDHIDVNVAAAICNNPKLDHVKFVGPWHCAELWKKWGVPEE
                     RIIVVKPGDVVKLKDVEIHALDSFDRTCLVTLPVEGAEERGGELAGLCPSDEEMGRKA
                     VNYVFKTPGGTIYHGADSHYSIQFAKHGKQFDIDVALNNYGENPVGIADKMTSVDLLR
                     MAECLRCKVIIPVHHDIWTNFMASTQEIIDLWRMRKDRLQYQFHPFIWEVGGKYVYPR
                     DKDLIEYHHPRGFDDCFEQEPNIQFKSML"
     gene            7505..9301
                     /locus_tag="PXB09_001132"
     CDS             7505..9301
                     /locus_tag="PXB09_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate-specific subunit IIBC"
                     /protein_id="HDL5233263.1"
                     /translation="MDFLTEILLFLKDQVLNKAPFLLGIVACLGYILLKKDTSTIIKG
                     TIKTIVGFMIVQAGSGFLVTNFKPVIDGLAKYHQLTGAVIDPYTSMQSTIQTMGENYA
                     WVGYAVIGALFLNILLVVFRRLTGIRTIMLTGHIMFQQAGLVAVFYMIIGASMWETII
                     YTSVLMALYWGISSNIMYKPTQAVTGGAGFSIGHQQQIASWIAVKLAPKLGDKDDTVD
                     KMKLPNWLNIFHDSISATALVMTIFFGIILLSFGLDNLKELAGKTNQFMYILEMGLKF
                     AVAIQIIVTGVRMFVAELSEAFKGIAERLIPNSVLAIDCAAIYAFSPNAMVFGFMWGA
                     IGQFVAVGGLLAVGSPVLIIPGFIPMFFSNATIGVFANQFGGWKAVMKICFVMGIIEV
                     LGSAWVIQMLASQGTTFNGWMGMADWALFFPPILQGIISIPGFFFVIVAAAMVYMFFA
                     SKQLRAEEAEAAARGITLEQLDGYGLDEVKAEPKAEAVVQQAVENAENSANPIRILAV
                     CGSGQGSSMMMKMKIKGYLDKRGIPNIMDSCAVTDYKGKLSEVDIIVSSKHLANEIEV
                     PEGKAVLGVQNMLNPNSFGDELVELINQHNAK"
     gene            9381..10442
                     /locus_tag="PXB09_001133"
     CDS             9381..10442
                     /locus_tag="PXB09_001133"
                     /inference="COORDINATES: protein motif:HMM:NF012376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5233264.1"
                     /translation="MKKILSTLFMLSAVSVAVAKEVNIKLLGTSDVHGRVVPWSYGAD
                     VEDKSGSFAQIATYVKEVRANHKNVLLFDIGDAIQDNQVEEFAKTLDKAKNNPVPKVL
                     NAMNYDIFILGNHEFNFGMPNLDAILKDINAKILTANFYHKDGKRYVEPTTIIERDGV
                     KLGIIGLTTPMSAIFEKDTGHLDAMKFTSPIEEAKAQIADLKAKGVDAIIVLAHMGIE
                     NENNIPDTGVADLVNAVDGIDVIIAGHMHKDVPSETIKNTLITEPHRYGTVVSEVDLA
                     FDVNDKGEVKLLSKTAKTVPVKKLASDPEIEKIYQPYHNELRALNNVKIGETAQDLIP
                     QGKITVYRLLSRKTPECPH"
     gene            10430..10894
                     /locus_tag="PXB09_001134"
     CDS             10430..10894
                     /locus_tag="PXB09_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5233265.1"
                     /translation="MSSLIHDVQQHYSGADVVSFAFDYETVRLDKGDIKKKDIIYNYR
                     YAGGDVSMYELTGKQLKQYMEWSADYFDTIQAGDKDYRYNAVRGKSKYVTFDLFGGVS
                     YNIDLRNPSGSKIVDLKLANGSLITDDGKYKVGMNSYRFGQLTKKGGIWEGQ"
     gene            10925..11041
                     /locus_tag="PXB09_001135"
     CDS             10925..11041
                     /locus_tag="PXB09_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ser/Thr protein phosphatase"
                     /protein_id="HDL5233266.1"
                     /translation="MGAEKGTIQNMLIDYITNVKGGKIEGKSHNRWAIIGLN"
     gene            11057..11524
                     /locus_tag="PXB09_001136"
     CDS             11057..11524
                     /locus_tag="PXB09_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5233267.1"
                     /translation="MNLKQSLIENNSILLNQSAANWEDAIKIGTDLLVKAGTIEPRYY
                     DNIVSKIKEMGPYIILAPGLAMPHARPEEGVIKTSFALVTFDTPIYFEGEDEPVHVML
                     TLAGSDSDQHMQGLVEITQVLDDPESDTGVDLDKIRRCKTAEEVYAVIDQALA"
     gene            11579..12259
                     /locus_tag="PXB09_001137"
     CDS             11579..12259
                     /locus_tag="PXB09_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDL5233268.1"
                     /translation="MSKPLLQIALDSLSLEKAVADAKQAENQVEIIECGTILAFAEGM
                     KAVSTLRVLHPNHIIVCDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVA
                     DEFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVTQAIYHRSRDAELAGKGWTT
                     EDVELMKQLSDLGIELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIR
                     VEIDKYWN"
     gene            complement(12327..13469)
                     /locus_tag="PXB09_001138"
     CDS             complement(12327..13469)
                     /locus_tag="PXB09_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDL5233269.1"
                     /translation="MKIVIAPDSFKESLTALEVAQAIQQGFARVFPEAEYQLVPMADG
                     GEGSVQSLVDATHGSLQKISVIAPLANEVEGFFGLSGDQKTAFIEMAAASGLHLVPME
                     QRNPLVTTSYGTGQLIKAALDLGVEKIILGIGGSATNDGGVGMLQALGAKFLNAEQRE
                     IGFGGEALSQIQQIDLSGLDSRLKQVEFEVACDVDNPLCGERGASAIFGPQKGATPEM
                     VKMLDHALLHFAETVKSQLGIEIAEKAGAGAAGGMGGGLLLLPNVTLRSGVQIILEAT
                     DLAEKLADADLVVTGEGRMDAQSIAGKTPIGVAKVAKQFGKPVIAIVGSLKEDYPVVY
                     QHGIDAVFPIIRQVSNLEAVLKSGKENLISTAENVARLWKISALQE"
     gene            complement(13479..14858)
                     /locus_tag="PXB09_001139"
     CDS             complement(13479..14858)
                     /locus_tag="PXB09_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5233270.1"
                     /translation="MSGIALILIFLVAIIIMIYMIAKWKVHPFLALMSISIALALVAG
                     LPLAKIPTIVGEGFSNTFKSIGIVIIFGAIIGTILEKTGAALKLADMVVKVVGQKRPE
                     LAMLIMGWVVGIPVFCDSGFVVLNPIREAIRKKILANPVGMAVALSAGLYASHVFIPP
                     TPGPIAAAGAVGLSHNLLLVIGMGFVVSIPVLIASYFFAKYVGKQVSVMEEAQADQVI
                     SQSYEDLIKQYGKLPSGFLSFAPIFMPIILMAIGSIAKIAGVSGDFGVFLQFVGNPII
                     ALAIGVIFAIFLLVSSGKMAEFDSLTNDTLKLVGPILFITAAGGVLGNVITQAGFVDY
                     IKQNAHIISTAGIFFPFLISAILKTAQGSSTVAIITTASIMGMFNAPDSLMNALGLTS
                     EMAAALTVMAIAAGSMCVSHANDSYYWVVTNFTKLTPQQGYRTQTTLTFIMGVVGMLT
                     VYLLSLILL"
     gene            complement(14980..16074)
                     /locus_tag="PXB09_001140"
     CDS             complement(14980..16074)
                     /locus_tag="PXB09_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5233271.1"
                     /translation="MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQR
                     HTGAVIALRNDQAVEIDENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQY
                     AQLVKMAAELIMQQAFELEQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAK
                     PLSVMVIKIHGSTAEKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNEKSLIRNAL
                     NKLNDPDISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPAL
                     LHSFSHSWEAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLR
                     YRLEKIEQITGLSFNNIEQKFVLYLGAVLS"
     gene            complement(16178..16630)
                     /locus_tag="PXB09_001141"
     CDS             complement(16178..16630)
                     /locus_tag="PXB09_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDL5233272.1"
                     /translation="MNLKAVAVSALAMSSVAMADIADVKPVVFESKFDFQTTVTTLTN
                     TLKEKGMTIFAEIDHQAAAKQAGLEMQPATVLVYGTPKAGTPLMVKDPMLALQLPLKV
                     LITEPNKGKVEVMLNRADQVVAHANTDYADVENNLAKAEKLIKATVAK"
     gene            complement(16651..17403)
                     /locus_tag="PXB09_001142"
     CDS             complement(16651..17403)
                     /locus_tag="PXB09_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDL5233273.1"
                     /translation="MHFEKRSHWSGELGREMSFNVYGHAGKPVIVFPSSGGNENEYGN
                     FGMIEACRSFIERGLIKFYTPDSYDAESWLSKHKSGHDMALAHNAYDRYIIHELVPLI
                     RHESHWNGTMIATGCSMGAFHTVNFALRHPDLFDIAIALSGVYDARFFSGEFYGDKAV
                     YFNSPIDYVWGQNDDWFLDRYRQNHYVIAVGQGAWEEQHIEDTRRLQEAFNAKGIDAW
                     FDYWGFDIDHDWPTWRKQMPYFLGKLEEQGII"
     gene            complement(17414..18598)
                     /locus_tag="PXB09_001143"
     CDS             complement(17414..18598)
                     /locus_tag="PXB09_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDL5233274.1"
                     /translation="MSRPLNFVMISPHFPTNFETFAIRLREAGFNTLGIADAPYESLS
                     ENLRHSLTEYYRVDNMEDYEQVYRAVAYFAHKYGRIDRIESHNEYWLELDAKLRTDFN
                     VFGYKSDDMLSIKTKAQMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVIIKPNS
                     GVGASDTYKIKTAEELEAFFGYKTPTVEYIMEEFIDGDIITFDGLTDKEGNIVFYSSL
                     EYSEAVLDTVSKDGDMFYYVPCEISPKLVEMGKQCVKAFNVKERFFHFEFFRVKGSKK
                     EELLPLEINCRPPGGLTIDMWNYANDFDVFREFANIVKENKFYADIQHPWNVVYISRK
                     ANQNYVNSIEAVCEKFAGNIISVQSVPGVFAKVMGEQGILARTETMEQMREIAQFAQA
                     KQ"
BASE COUNT         5280 a         4231 c         3709 g         5378 t
ORIGIN      
        1 taaaaaaacg ggcgtataaa cgcccgtttt gtttaaaaag attcagttag aaattaattc
       61 taatcccagc agtcacaacg ttgttgtgac cactattttt tgcgagttta aggtcgtaat
      121 tcacatataa ggaagtattt ttatttactt ccgccaatgc accaatccct acccacgttt
      181 tatgttttgc aagcccaata ccttttacgt cgaattttgc atcttgtaaa cctgtataac
      241 ttgctttaaa gctaagatct tctcgattaa acgctttttg atgatttaca tagccttgga
      301 aagtcgtttt catcccagct aaattcacct ctaaagatgt tcgtaaacca atcaatccgc
      361 ttgtttgttt ataggttgct ttgtccgcgg tgagaccaaa ttgactgttt tgctcactga
      421 atgcgccacg tctgacaaca tcatgactaa aaccgacaaa tggagttaac gcaaagcgac
      481 cttgcttgaa gtcatagcct gattcaacat aagcagaaaa tactctgtct cggtggttga
      541 tttttgctgt acttgcgtta ttatccgcca aaataatatg acgctctaca tctgaatcaa
      601 cactgccata accggctcga ccttgtaaat accaaggtgt tttatgctta ttgcctatac
      661 gggcatataa tgatgcacct attccatctg cttttgaact accgccataa cgatcgaagt
      721 tcacttttgc tttagaataa ttaagtgccg cacctaaaat cacatggtct gtaactggct
      781 tatcaaaacc tatttggcca gcataggtat tggttttacc ttcaccaaac cctatttctt
      841 ttagagtacc attcccataa atacccgtta ctcacacacc agcagtctca cctacattat
      901 ccagcgttcc taacattaca agacggttag agagatcttt attcactgtt tctgagtttt
      961 caaaagtaag cgcttgcgca gacgcataaa tttgaccaga taagctatct aaaaccacac
     1021 tttgcgtatt gatgtttgca atactgtttt gtaaagtagc cgcttgttgt gcgaattcat
     1081 catttgtagc atttgtagaa ccattatttc cttcaatttg gttatccaat gccgaaaatg
     1141 agctctctaa agcagtcgcg acatttttcc ggctaactgt tgcttttact tcattctcat
     1201 tggttttttc cgccgtcgca gttaataacc ctgaggtttc tattgcagca aagttaccct
     1261 taattgcgga atcagaagta atagcactca ttgataaacc tttttgggtc acatactgag
     1321 ctttaccctc ttttaccgca gctagtgata aagtagagcc gtttaagtca acttctcctt
     1381 ttacatttaa gtttgaacct aaatctgaca ctagcgtact ttgtgctgaa gcaacgtaag
     1441 ctctcttaat cgtagaataa ccctggttga caactgtacc ctcgttattt acgccatttt
     1501 ctaacgtggt attattgaca accaatgtac cacttggaga tacgtttact ttagacacat
     1561 attttttacc gttaatagtg acagcacctt cattgagtgt tgtatcccct tcaaaagtac
     1621 tagcacccga taaaattaat tcgccttggc catttttcac caagcctgca tcaccgttaa
     1681 tattattgga aaactcatag cttccatttg gaatatttac agtcacgtta tcggctaaag
     1741 cgagtcgttt accaaaacgc gcagggccat tagtggcttt ttcaatatta agtaaacccc
     1801 atccatatac atcatcaact ccaggagcgc cgatatcggt tgccgtcgag agaatagatt
     1861 gtttgataag gttaccatcc atccaaggat atttttgttt cacgagagct gctgtacccg
     1921 taacggctgg agctgcaaag gatgaaccac tagcaataat gtttctacct cctaaattaa
     1981 agatgtagtc acccattgcg gtaacggtcc aattttttgc cacaccggct tgagaatatg
     2041 gcaataaatt gctccattca aagttaccca atccctgatt agttctggtt gctaccgcaa
     2101 caacagaaat ccaacctttt tccaagtcag cttcataatg aggtaaccca gcttggagtg
     2161 atggatcaag atcaccacgg ttattccccg cagcccagac aaataagccc ccctctttta
     2221 ctttatcctt atagaattgc aacacattac catcaaattg gtgtaaatag taatagctag
     2281 aatttctatt gttattaaaa taagtaagag gctttggaat accgtatgat tggttaaaaa
     2341 tacgggctcc cctattccat aagtcataat aaattggagc tgttgcggat aatcctgtac
     2401 ccgcatttgt tgttttggta atatccgcaa gtaataacgt tgacttagac gctactccat
     2461 tgcgagagtt ccctccccca accatttctg cgacctcaat accatgtgtt gcagaagccg
     2521 gggcagtacg ccctgtttca ataataacag cgcgattacc aaattttttg agtatatcgt
     2581 cctgcattaa atagttttta aaaccactat ctaagatacc gactttaaca ccttcaccag
     2641 ttaacttaac attttgtttg ttattaggat catcaatgtt gtaaccacga gagcggtcat
     2701 tccatcgaat acctacattg ggtacaccaa cagctacagg ttcaggatga agatttaccg
     2761 gtgttgtagg cctaatgata actggacggg tgtcatcaat tggcgattca atgacaggtt
     2821 tgttatctgt aattggatta ggctgtgtat cagtgatggg tttattatca actattggtt
     2881 ggactggcgg atccataatt gggttggcat caataaccgg ttgagttggc gtatctacaa
     2941 cgggtttatt ggcaatcggt gtcggtttat ttacaattgg tttgttcaca gcaggagcat
     3001 aagtggtacg aacggttgtt ctcccattat gcgttgtata aacttttgta actgtaatgc
     3061 cattaactgt tgtcgaaaca gttctggttg ttacacctgc attgctacct ggataatacc
     3121 acgacgaata accattacgg ctattcgatg tatagtagcc cgaataaatc ggtgcatatt
     3181 tatagtaact ataataacta tccgtggcgg aaggataata tcttgttcta cttgcaagct
     3241 gatctgaaag ttcagttgcg ttaacctctg gcgataaggc taatattgtt gctattgcaa
     3301 caaaataatt tctatttttc accttttggt ttccttctaa taaatacaaa gatactcttg
     3361 tttatttcaa atctactacg gatccttaat agacttgtaa aaacaagagg cagagattag
     3421 aacaaaaatc aaaattaaaa tcaagaaaag gaaaatggta attatttgtg gatctatcca
     3481 taaactcaaa cagactgagg agctattccg attatagaaa gcccctcgaa agctgttgat
     3541 aatttggaaa ataattttta ggttattagc tattgcccat aataagcatt tgcaccatgc
     3601 ttacgcagat aatgcttatc taataattcc tgttgcattg ggccaatttg tgggcgaatt
     3661 tgatggctaa taaaattcat gtaagccacc tcttctaata ccacagaatt atgcacagca
     3721 tcgtgtccat cttttcccca ggtaaatgga ccgtgtgaat gtaccaacac acctggaact
     3781 gctttcggtt caatacctcg agttcggaaa gtttcgacaa tcacctttcc ggtttccagc
     3841 tcataactgc cggcaatttc ctctgcggtc attttgcgag tacaaggaat cgcaccgtag
     3901 aaataatcgc cttgagtggt gccaagtgcc aataaatcac gccctgcttg tgcccaacct
     3961 acagcattgc gagagtgagt gtgtaccaca ccgccaatat cagtgaattg gcgataaagt
     4021 tctaagtgcg tttctgtatc agaagacggt tttttatctc cgtaaactcg attaccttgt
     4081 aaatcaacca atacaatgtc ttccaccgtc atcgcatcgt attctacgcc ggaaggtttg
     4141 atggcgacta aaccggtctc acggtcgatt tcacttacgt taccccaagt gaaagttacc
     4201 aagccatact tcggtaattc taaattggct tttaacacac gctctcttaa ggcttgtaat
     4261 gcaggggtta attcagttaa ttgcgtcata gggtaaatcc tccttcttgc attttttgtt
     4321 cgatccaacg gcgggcgttg atgatttcag taatcggctc ttcggctttt tccgtccaca
     4381 tttcaattaa gaatgcgcca cggtaattca gctcggcaag ggttttaaaa caagcggcga
     4441 aatctacgca accgtcacca aatggcacat cacggaactg ccctttgcag gtttcagtca
     4501 ctttgtaagt gtcttttaag tgaatggcag agattttgtc gatgccgagt ttcagctctt
     4561 ccgctacgtt gtcgttccac gctgagaggt tgcctaaatc tggatacacg gtgaaccacg
     4621 gtgatttgat gatctcgtcc cattttttcc agcgggaaat cgaactcata aattgggtgt
     4681 ccataatttc caccgcaatg gtaacttggt tgcttgccgc cagctccacc gcccattcta
     4741 agccttgttg gaagcgttgg attgtgcctt cgtcctgctc ttcgtaatag acgtcatagc
     4801 cggcaagctg aatggtgcga ataccgagat cgaccgccag ttgaatggct ttttccataa
     4861 tttcataggc tttttggcgg gtcgcttcat cacaagaacc aaacgggaaa cggcgatgac
     4921 cggacaagca cattgacgga atggtcacgc cggtgttgat gatggttttc accagcttgg
     4981 cacgttcttt tttgctccaa tcaaggcggg ctaagcgttc gtccgtttcg tcaatcgaca
     5041 tttccacaaa gtcaaaaccg cagactttgg cgatagaaag gcggtcttgc cacgaaatgt
     5101 ttttcggcaa ggccttttcg taaataccca gtttatgttt tctcatagtt ttcccttgaa
     5161 gatgataagt aaaattttga ttaaatttga ccgctacagg ctaagccaag ataatatcca
     5221 ggcctttgtt tcttaatgct tggataatag tcggatccgc ctctttgccg gtaatcaata
     5281 aatcaatttt atcgaactct ttaaacagca taccgacttt tttgccgagc ttggtgctat
     5341 ccaataacac cacataacgt tctgcgtgct ttgccatttg ttgctcggca ttggcaataa
     5401 tcatatcggt tttaaataat ccttcgctgg ttaagccttt gccactggta aacattgtgg
     5461 tagcggcata agtcatctca ttttgggtgt taattgagag catcactttt ttatgtttat
     5521 tatattgccc acccataatc actacatcat cgtggcaacc tgcaatcaac tggtttgcaa
     5581 gcggtagata attggtaata atttgcaatt ttctaccaca taatacttca ccgagcattt
     5641 ccattgtgga accacacgtc agaataagac tttccccatc tttacataaa cgaccggcag
     5701 cttccgctat tctacgtttc tcctgcgcat tgttagttat ttttgtgtgc tgtaaaaatg
     5761 taggagccag aattgcttct gctccgtttc taaccttttt taatttacct tgaccatcta
     5821 atttactgat atcacgtctt gctgttgccg gagaaatatt taacagctgc ataatatctg
     5881 ctgttgacag tgctttccgc tcttccaaca gggctaataa ctctttgtgt ctataacttt
     5941 cgttcactac tttatcccat tactaatcac tactgctcca taatgaactt gctaaaacgc
     6001 cactctccag tgagagtggc gactgctcac ctatagcatg gatttaaatt gaatatttgg
     6061 ctcttgctcg aagcagtcat caaagccgcg agggtgatga tattcaatta agtctttatc
     6121 acgtgggtaa acatatttgc cgcccacttc ccaaataaat gggtggaatt ggtattgtaa
     6181 gcgatcttta cgcatacgcc ataaatcaat aatttcttgc gtacttgcca taaagtttgt
     6241 ccaaatatca tggtgaaccg gaataatcac tttacagcgt aaacactccg ccatacgtaa
     6301 taaatcaact gaagtcattt tatccgcaat accaaccggg ttttcgccat agttattcag
     6361 cgctacgtca atatcaaatt gcttaccgtg tttagcgaat tggattgagt agtgagaatc
     6421 tgcaccgtga taaatcgtac cgcccggggt tttgaacaca tagttcaccg ctttgcgtcc
     6481 catttcttca tctgatgggc ataagcctgc aagttctccg ccacgttctt ctgcaccttc
     6541 taccggtaag gtcactaaac aggtacggtc aaatgaatct agggcgtgaa tttctacatc
     6601 ttttaatttc acgacatcgc ccggttttac cacaataata cgttcttccg gcacgcccca
     6661 ttttttccat aattctgcac agtgccaagg gccgacaaat ttaacgtggt ctaatttcgg
     6721 gttattgcaa atagccgctg ccacgtttac atcaatatgg tctgagtgat agtgagaagc
     6781 gagaatgaag tccacttcgt taatcgcaaa cggatctaac accatcggtt gagcccgcaa
     6841 attaggctgg agcttacgca cccctgccat atttgccatt tgatgaccac gcaccatatc
     6901 ttttactttc ttggtggatt taccacgacc gcaccataaa tccatacaga tattcgcacc
     6961 agctggggtt ttaatccaca caccgacaca gcctagccac cacattgcaa aattgccttc
     7021 cggtacaact tcttcttcaa tttcttcatt caaccaagta ccccattcag ggaaagttga
     7081 aaggatccag ctttcacgag tgatttcttg aattttgctc ataatagtct cctgatttac
     7141 gctaaaataa gaacaatgca atcaaaacca atcataaaca atcacaaaaa tttgtacatc
     7201 ttttttattc aaaaatgtga tctatgtcta attttttatg atttactggt aaaaatttat
     7261 tttaataact tgatttaaat accatttatt tagcatatat gagctaattt aaagaataat
     7321 ctttaataat cacgaataaa tatatttttc ttcctccatg acgagattat aaaaataaaa
     7381 tgtgatctcg ctcacaaata attaaaaata atctttttta atctttttct agcgtttatc
     7441 attaattccg acaacttctc tggagttttt tagttctatt aatctctcaa caaagaggcc
     7501 ccctatggac tttttaaccg aaattctcct tttcttaaag gatcaagtgc tgaataaagc
     7561 acccttctta ctaggtatcg tagcttgctt aggttacatt cttcttaaaa aagacacttc
     7621 tacgattatt aaaggcacaa ttaaaacaat tgtcggtttt atgattgtac aagccggttc
     7681 aggtttctta gtaaccaact ttaagccggt tattgatggc ttagccaaat atcaccaact
     7741 taccggtgca gtaattgacc cttacaccag tatgcaatcg accattcaaa ccatgggcga
     7801 gaactacgct tgggttggtt atgccgtaat tggggcgctg ttcctcaata ttctattagt
     7861 ggtgttccgc cgtttaaccg gtatccgtac cattatgctc accggtcaca ttatgttcca
     7921 acaagcaggc ttggttgcgg tgttctatat gatcatcgga gcgtcaatgt gggagaccat
     7981 tatctacacc tcagtgttga tggctcttta ttggggtatt tcgtctaata ttatgtataa
     8041 accaacccaa gcggtaacag gcggtgcagg cttctcaatt ggtcaccaac aacaaattgc
     8101 ttcttggatt gcagtcaaac tcgcaccaaa acttggcgat aaagacgata ctgtagataa
     8161 aatgaaattg cctaactggc tcaatatttt ccacgacagt atttctgcaa ccgcattagt
     8221 aatgaccatc ttctttggaa tcatcttact ttcattcggt ttagataacc tcaaagaact
     8281 tgctggcaaa accaaccagt ttatgtacat tcttgaaatg ggcttgaaat ttgcggtggc
     8341 aattcaaatc attgtaaccg gcgtacgtat gtttgtagct gagctttcag aagccttcaa
     8401 aggtattgct gaacgcttaa ttccaaactc agtattagcg attgactgtg ccgctatcta
     8461 cgctttctcg ccaaatgcga tggtattcgg ctttatgtgg ggggctatcg gtcaatttgt
     8521 ggcagtaggc ggcttgcttg cagtaggctc accggtgctt attattccgg gctttatccc
     8581 gatgttcttc tctaacgcaa ccattggtgt gtttgcaaac caatttggtg gttggaaagc
     8641 agtaatgaaa atctgttttg tgatgggtat tattgaagtg cttggctcag cttgggttat
     8701 tcaaatgctt gcttcacaag gcacaacctt taacggttgg atgggtatgg ctgactgggc
     8761 attgttcttc ccaccaatcc tacaaggtat tatcagcatt ccgggcttct tctttgtaat
     8821 tgtggcagca gcaatggttt atatgttctt cgcatctaaa caacttcgtg ccgaagaagc
     8881 agaagcggca gctcgtggca ttacacttga acaattagac ggctacggct tagatgaagt
     8941 aaaagcagaa ccaaaagcgg aggcagtagt acaacaagcg gtcgaaaatg ccgaaaattc
     9001 tgcaaaccca atccgcattc tagcggtgtg tggctctggt caaggctcat caatgatgat
     9061 gaaaatgaag atcaaaggct atctcgacaa acgtggtatt ccgaatatta tggattcctg
     9121 tgcggtaact gattacaaag gcaaattaag cgaggttgat attattgtct ccagcaaaca
     9181 tttagccaac gaaatcgaag taccggaagg caaagcggta ttaggtgtac aaaatatgct
     9241 aaatccaaac tcatttggtg atgaattagt tgagctaatc aatcagcata atgcaaaata
     9301 agtaagttta ggggtgaata atcaccccta tctatgctaa agattgtaaa aactcacttc
     9361 atcaaacgag gaattatcca atgaaaaaaa tcttatccac cctgtttatg ctctccgcgg
     9421 ttagcgttgc cgttgccaaa gaggtaaaca ttaaactact tggtacctca gacgttcacg
     9481 gacgtgttgt gccgtggagc tacggggcag acgtggaaga caaatccggc tcattcgccc
     9541 aaattgcaac ctatgtcaaa gaggtgcgtg ccaaccacaa aaatgtgttg ctgtttgata
     9601 ttggcgatgc gattcaagac aaccaagtcg aagagttcgc taaaacctta gacaaagcga
     9661 aaaacaatcc cgtgccgaaa gtgctgaatg caatgaatta cgacatcttc attctcggca
     9721 accacgaatt taacttcgga atgccgaatt tagatgcgat tttaaaagac atcaacgcca
     9781 aaattctcac tgccaacttc tatcacaaag acggcaaacg ctacgttgag ccaactacca
     9841 tcattgaacg tgatggcgta aaacttggga ttatcggctt aaccacccca atgtcggcta
     9901 tttttgaaaa agacaccggt catttagacg caatgaagtt cacttcgccg attgaagagg
     9961 cgaaagccca aattgccgat ctcaaagcca aaggcgtgga cgccattatt gtgctggcac
    10021 atatggggat tgagaacgaa aacaacattc ccgacaccgg cgtggcggat ttagtgaatg
    10081 cagtggacgg tattgatgta attatcgccg gccatatgca taaagatgtg ccgagtgaaa
    10141 ctatcaaaaa taccctgatt accgaaccgc accgctacgg cacagtggtt tccgaagttg
    10201 atcttgcctt tgatgtgaat gacaaaggcg aagtgaaact actttctaaa accgccaaaa
    10261 ccgtaccggt gaagaaactc gcaagcgatc cggaaatcga aaaaatttac caaccgtatc
    10321 acaatgaact gcgtgcctta aacaacgtca aaatcggtga aactgcacaa gatttaatcc
    10381 cacaaggcaa aatcacggtg tatcgattgc tttctcgcaa gacaccggaa tgtcctcatt
    10441 gatccacgat gtgcaacaac attacagcgg tgcagacgta gtgagttttg catttgacta
    10501 cgaaaccgtg cgtttagaca aaggcgacat caagaaaaaa gacatcatct acaactaccg
    10561 ctatgccggt ggcgatgtga gcatgtatga gctaaccggc aaacagctta aacagtatat
    10621 ggaatggtca gcggattact tcgacaccat tcaagccggt gacaaagact accgctacaa
    10681 cgctgtgcgg ggtaaatcta aatacgttac cttcgaccta ttcggcggcg taagctacaa
    10741 catcgaccta cgcaatccaa gcggtagcaa aattgtcgat ctaaaactgg caaacggcag
    10801 tctaatcacc gatgacggca aatacaaagt gggaatgaac tcctaccgct ttggtcagct
    10861 caccaaaaaa ggcggcatct gggaaggaca gtaaatcccc gtgatttggg aatccaaagt
    10921 cgccatgggg gctgaaaaag gcacaatcca aaatatgctg attgattaca tcaccaacgt
    10981 caaaggcgga aaaatcgaag gcaaatcgca taaccgctgg gcgattatcg gcttaaatta
    11041 acgaaaggga aacactatga acttaaaaca atctcttatt gaaaataact ctattttgct
    11101 caatcaatca gcggcgaatt gggaagacgc aatcaaaatc ggcactgatt tattagtcaa
    11161 agccggtacg attgaaccac gctattacga taatattgta agcaaaatca aagagatggg
    11221 gccttatatt attcttgcac cgggcttggc aatgcctcac gcccgtccgg aagaaggtgt
    11281 gattaaaacc tctttcgctt tagtgacttt tgacaccccg atttattttg agggcgaaga
    11341 tgagccggtt cacgttatgc taacccttgc agggagtgac tctgatcagc atatgcaagg
    11401 cttggtagaa atcacccaag tgctagatga cccagagagc gacacaggtg ttgatttaga
    11461 taaaatccgc cgctgtaaaa cggctgaaga agtgtatgca gtaatcgatc aggcattagc
    11521 ctaatattct acaagcggtt caaaaacatc aatattttgc aaatagagga atacaattat
    11581 gtccaaacca ttattacaaa ttgcccttga ttctctttca ctggaaaaag cggtggcgga
    11641 tgcaaaacaa gcagaaaacc aagtcgaaat tattgaatgc ggtactattc ttgcttttgc
    11701 tgagggtatg aaagccgttt ccaccttgcg tgtattgcac ccaaatcaca ttattgtgtg
    11761 cgacttaaaa accaccgatg gcggtgcaat tttagctaaa atggcatttg aagccggtgc
    11821 cgactggctc acggtttcgg ctgcggctca ccctgcaacc aaagcggctt gcaaaaaagt
    11881 ggcggacgaa tttaacgctg ctcacccgga gctaaaagtg aaaaaagaga ttcaaattga
    11941 aatctacggc aactggacgg tggaaaaaga tgccaaagag tgggtagaat taggggtaac
    12001 ccaagcgatt taccaccgct cccgtgatgc ggaactagca ggtaaaggtt ggacaacgga
    12061 agatgttgag ttaatgaaac agctttctga cttaggcatt gaattatcta tcaccggcgg
    12121 tatcgtaccg gaagatattc acctgttcaa agagatcaaa aacgccaaag cctttattgc
    12181 aggccgtgct ttagtcggtg aaaaaggcaa acaaactgcc gaagccattc gtgtggagat
    12241 tgataaatac tggaactaat ccggcattga aacccaataa aaatggcgtt ctctcaaccg
    12301 gaacgccatt ttttatctca ttttttctat tcttgcaagg ccgatatttt ccacaatctc
    12361 gctacatttt cggcagttga aatcaggttc tctttgcctg attttaacac cgcttctaaa
    12421 ttgctgacct gtcgaataat cggaaatacc gcatcaatgc cgtgttggta caccacaggg
    12481 taatcttctt tcaatgagcc aactatcgca atcaccggct tgccaaactg cttagcgact
    12541 ttcgccaccc caatcggggt tttaccggcg atagattgag cgtccattcg cccttcccct
    12601 gtcaccacca aatccgcatc ggcaagtttc tcagcaagat cggttgcctc aagaataatt
    12661 tgcacgccgg aacgtaatgt tacgttaggc agtagcagta aaccaccgcc cattccaccg
    12721 gctgcaccgg caccggcttt ctcggcaatc tcaatgccta attgggattt tacggtttcg
    12781 gcaaaatgca acagggcgtg gtcgagcatt ttaaccattt ccggtgtagc tcctttctgt
    12841 ggcccaaaaa ttgccgaagc ccctcgctcg ccacacagcg gattatcgac atcgcaagca
    12901 acctcaaatt ccacttgctt taagcgtgaa tccaaaccgc ttaaatcaat ctgctgaatt
    12961 tggcttaatg cctcgccacc aaagccgatt tcccgctgtt cggcatttag aaatttcgct
    13021 cctaaggctt gtagcattcc gacaccgcca tcgttagtcg cactgccgcc aatgccgaga
    13081 atgatttttt ccacccctaa atctaaggcg gctttaatta actgccccgt gccgtagctg
    13141 gtggtaacca gcggatttcg ttgctccatt ggcactaaat gcaagccact tgccgccgcc
    13201 atttcaataa aggcggtttt ttgatccccc gacaagccaa aaaagccctc cacctcattt
    13261 gcaagcggtg caattacgct gattttttgc aaactgccgt gagtggcatc aaccagcgac
    13321 tgtaccgagc cttcgccacc gtctgccatc ggtacgagct gatactccgc ctcagggaaa
    13381 acacgggcaa aaccctgttg aattgcttga gccacttcta atgcggtcaa actctcttta
    13441 aatgaatccg gtgcaatcac aattttcatc gtcaatcctt agagtaaaat caatgaaagc
    13501 agataaaccg tgagcatacc caccacaccc ataatgaaag ttagggtagt ttgcgtacga
    13561 tagccttgtt gcggagtcag tttagtaaag tttgttacca cccagtagta gctgtcattg
    13621 gcgtgggaaa cgcacattga gccagccgca atcgccatta cggttaaggc tgccgccatt
    13681 tcactggtta gccctaaggc gttcattaat gagtccggtg cgttgaacat tcccataatg
    13741 gaggcggtgg tgataattgc caccgttgag ctgccttgtg cggtttttaa aattgccgaa
    13801 atcaggaacg ggaagaaaat ccctgctgta ctgataatat gagcgttttg cttgatgtaa
    13861 tccacaaagc cggcttgagt aatcacgtta cctagcacac caccggcggc ggtaataaag
    13921 agaattgggc cgactaattt cagggtatca ttggttaagc tgtcaaattc cgccatttta
    13981 ccgcttgaaa ccagtaggaa aatagcgaag atcaccccaa ttgctaacgc aataatcggg
    14041 ttgccgacaa attgtaggaa tacgccgaaa tcgccactta caccggcaat tttggcaatc
    14101 gagccgatag ccattaagat aatcggcata aaaatcgggg caaagcttaa aaacccactt
    14161 ggtaatttgc cgtattgttt gatcagatct tcatagcttt ggctgattac ttgatccgct
    14221 tgagcttctt ccatcacgct gacttgtttg ccaacatatt tggcaaagaa gtaactggca
    14281 atcaacacag gaatcgaaac cacaaagccc attccgatca caagcaggag attatggctt
    14341 aaaccaacag caccggctgc tgcaatcggg cccggtgtcg gaggaataaa gacgtgggag
    14401 gcatataaac cggcacttaa cgccaccgcc attcccaccg gattggcaag aatttttttg
    14461 cgaatagctt cacgaatcgg gtttaacacc acaaagccgc tatcacagaa cactgggata
    14521 ccaaccaccc agcccataat caacattgcc agttcagggc gtttttgccc caccactttt
    14581 accaccatat cggctaattt gagggctgca ccggtttttt ctaaaatcgt gccgataatc
    14641 gccccaaaaa taatcacgat accgatactt ttgaaggtat tactaaaacc ttcgcccaca
    14701 atagttggaa ttttggcaag cggtaaacct gccactaatg caagggctat cgaaatcgac
    14761 attaaggcta agaacgggtg aactttccac ttcgcaatca tataaatcat tatgatgata
    14821 gcgaccagaa agatcagaat aagtgcaata cctgacataa taagtctcct cattgtagaa
    14881 aaatgaactt attattcggt atttattgct aaaaagattt agataaattt gcaaaaaatt
    14941 tgttaaaaac gaccgcttgt ttgtatattt ttacaatttt tacgacagaa ccgctccaag
    15001 atacagcaca aatttttgct ctatgttatt gaaagataaa ccagttatct gctcaatctt
    15061 ctctaaacgg taacgtagcg tatttgggtg aataaacaat tttttggcag cgtgatccag
    15121 atcacaattt gcgaaaaaat agtaacgcag acttttcagt aacacctgtt ttttatcgga
    15181 aaccagtaaa gcttggaacg gcgagagcaa ggttttcgct tcccaagagt ggctgaaact
    15241 gtgcaagagg gccggcagtt taaaatcttc aaaatgaata atctgcttac ggctttggat
    15301 ctgctcggca taattgaggg tatggcaggc ggtttggtag gaaatatggg tttgcgataa
    15361 attttcgacc gccagcccaa ccaccgtttt gaaggaaata tccggatcgt taagtttgtt
    15421 tagtgcattg cggattaacg atttttcgtt ggataaatga ttcagcaagg caattttatc
    15481 taacccaatc acggcggtga gtaggctcgg gaaataatgt tcgaaaaaat caatcaggcg
    15541 ttggagtttt tccgcagtag agccgtgaat tttaatcacc atcaccgaca gcggttttgc
    15601 aaaatcttgc ccgaaaaaga ccgcttgttg ctggatttct gctgtgctta ggctaccttt
    15661 gagcaaggcc cgcacaaact cttcccgata gcggcgttgc caacgttcct gttccaactc
    15721 aaacgcttgc tgcataatca gctccgccgc cattttcacc aattgagcat attgccgaac
    15781 ttgttgtggc tgccctgaaa tccccactac accaatggtt gagcctaaat agtgaagcgg
    15841 taagttaatg cccgctttca cttcatcgca ccactgtttt gcaagatttt catcaatttc
    15901 gaccgcttga tcgttgcgta acgcaatcac cgctcctgtg tgtcgttgcc cgatacgacc
    15961 gacatcgccg gaagcaataa tcaccccttc actatccatc acattgacgg agttgggaat
    16021 aatctgcatc gtgcgcttga cgatgcggtc ggcaatcgct tggttgagtt tcattatatg
    16081 attcctactc attcccaata ctatgaaaaa tccctctttc gagggatttg caaattatct
    16141 acgcttccac ttcctgagaa tagatcatag cgtgaagtta ttttgccaca gtcgctttaa
    16201 ttaatttttc cgctttggca aggttgtttt ctacatcagc ataatcggta ttagcgtgag
    16261 ccaccacttg atcggcacga tttaacatta cttcgacctt gcccttgttc ggttcggtaa
    16321 ttaacacttt taacggtaat tgcaacgcta acatcggatc tttcaccatt aatggcgtac
    16381 cggctttcgg tgtgccgtaa accaatacgg ttgccggttg catttctaag ccggcttgtt
    16441 ttgccgccgc ttggtgatcg atttcggcaa aaatcgtcat tcctttttct tttaaggtgt
    16501 tggttaaagt tgtgactgta gtttggaaat caaatttact ttcaaatacc accggtttga
    16561 catcggcaat atctgccatt gccacgctgc tcattgctaa tgcagaaact gcgactgctt
    16621 ttaagttcat ttcttttctc ctcaaataga ttaaataatc ccttgttctt ccaacttgcc
    16681 taagaaataa ggcatctgtt tacgccaagt cggccagtca tggtcaatat caaagcccca
    16741 gtagtcaaac caagcatcga tcccttttgc gttaaaagcc tcttgtaatc ggcgggtgtc
    16801 ttcaatatgc tgttcttccc acgcaccttg tccgactgca atcacatagt gattttggcg
    16861 gtagcggtct aagaaccaat cgtcattttg accccataca taatcaatcg gcgagttaaa
    16921 ataaaccgct ttatcgccat aaaactcacc actgaaaaag cgagcgtcat aaacaccgct
    16981 taaggcgatg gcaatatcaa acagatccgg atgacgtaag gcaaagttta ccgtatggaa
    17041 agcccccata ctacaaccgg tggcaatcat cgtgccgttc cagtgcgatt catggcggat
    17101 taacggcact agctcgtgaa taatataacg gtcgtaagca ttatgagcta atgccatatc
    17161 gtgtccggat ttatgtttag ataaccaaga ttccgcatcg taagaatcag gcgtgtaaaa
    17221 tttgattaag ccacgttcaa taaaggaacg gcaagcctca atcattccaa aattaccata
    17281 ctcgttttca ttgccgccgg aggaagggaa aacaataacc ggtttacctg cgtgtccgta
    17341 aacgttgaac gacatttcac gacctaattc tccactccag tggcttcttt tttcaaaatg
    17401 catacttcac ctcttactgt ttagcttgtg caaattgtgc aatttcacgc atttgctcca
    17461 ttgtttcggt acgggctaaa atgccttgtt cgcccatcac tttggcaaat acgcccggta
    17521 cgctttgcac gctgataata ttgccggcaa atttctcaca aacagcttca atcgaattca
    17581 cataattttg gtttgccttg cgggaaatat aaaccacgtt ccaagggtgc tgaatatcgg
    17641 catagaattt gttttctttc acaatattgg caaattcacg gaacacatcg aaatcgttgg
    17701 cgtagttcca catatcaata gttaagccac ccggcggacg gcagttgatt tcgagtggta
    17761 acaactcttc ttttttgctc cctttaacac ggaagaactc aaaatggaaa aaacgctctt
    17821 ttacgttaaa ggctttcaca cattgtttgc ccatttccac taattttggc gaaatttcac
    17881 atgggacata gtagaacata tcgccatctt ttgaaacggt atctaatacc gcttctgaat
    17941 attcaaggct ggagtagaaa acgatattgc cctctttatc ggttaaaccg tcaaaggtaa
    18001 taatatcgcc gtcaataaac tcttccataa tatattcaac cgttggcgtt ttataaccga
    18061 agaaagcttc taactcttcc gcagttttga ttttgtaagt atcgcttgcc ccaacccctg
    18121 aatttggctt gataatcacc gggaatttaa gctgttttgc taatttgcgg gcatcttcat
    18181 catctttaaa tactcgccct tgtgccactt tcaagccggt tttgcggaat acctctttca
    18241 tttgggcttt ggttttaatt gagagcatat catcgctctt ataaccaaac acattgaaat
    18301 cggtacgcaa tttcgcatct aactccagcc aatattcatt gtgcgattca atgcggtcaa
    18361 ttcgcccgta tttatgggca aagtacgcga ccgcacgata aacttgttcg taatcttcca
    18421 tattatctac acgataatat tcagtcaggg aatgacgcag attttcgctc aatgattcat
    18481 aaggggcatc tgcaattccc aatgtattaa aaccggcttc acgcaaacga atggcaaagg
    18541 tttcaaagtt cgttgggaag tgcggggaaa tcatcacaaa attaagtggt ctagacat
//
LOCUS       DANLTI010000043        18173 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.043, whole genome shotgun sequence.
ACCESSION   DANLTI010000043 DANLTI010000000
VERSION     DANLTI010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18173
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.043"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(114..4100)
                     /gene="hrpA"
                     /locus_tag="PXB09_001144"
     CDS             complement(114..4100)
                     /gene="hrpA"
                     /locus_tag="PXB09_001144"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL5233275.1"
                     /translation="METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHK
                     RSVLAEISQDLTACQARFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAG
                     ETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKV
                     RFNDQVSENSLIKLMTDGILLAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQI
                     LHKRPDLKVIITSATIDVERFSKHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGIL
                     NAVDELQAEGRGDILIFMNGEREIRDTAEALQKQELRHSEILPLYARLSAAEQQRIFQ
                     PSGGLNRIILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
                     QRKGRCGRTSEGICIRLYSEEDFNSRPQFTDPEILRTNLAAVILQMTSLGLSDIANFP
                     FVDAPDSRQIQDGIRLLEELQAIIPNEKIPSTACGGGLGRGEIRSNDGTPPLPTSPRK
                     RGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAKNGSLHEVMMIVSALSIQDPRERPQEK
                     QQSADDKHRRFADKESDFLAFVNLWHFIQAQQKELSKNQFRNLCRKDYLNYNRVREWQ
                     DIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLLSHIGLKDNEKMHYLGARNAHFF
                     IFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEWVEPLAVHLTKSSYSEPHWAK
                     SKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFIRSALVEGECHNNYKFFKEN
                     HRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVVSSKHFDTWWKQASKKDPEL
                     LNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFEVGKDHDGVTVHIPLPLLNQ
                     VEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGRAEPFKKPLLDNL
                     SHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKKLQESENLDELKFALKDEVQ
                     NTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQTAVGVKLFETE
                     FEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAV
                     DQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQVEKCLTLAYELNKRLKGKLD
                     FTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLTAIERRLDKLLVDSNTDRAK
                     MLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELRVSLFAQQLGTKYPISDKRI
                     LNVINEIK"
     gene            complement(4204..4656)
                     /locus_tag="PXB09_001145"
     CDS             complement(4204..4656)
                     /locus_tag="PXB09_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDL5233276.1"
                     /translation="MTLQFNAVALLLVVLIILGLISQNSAVTISAAVLLIMQQTLLSK
                     FIPFVDQYGLKIGIIILTIGVLSPLVSGRITLPELAQLLNWKMALSIIAGVLVAWLGG
                     RGVNLMGSQPVLVTGLLIGTVIGVAFLKGVPVGPLIAAGILSLIVGKT"
     gene            complement(4719..4988)
                     /locus_tag="PXB09_001146"
     CDS             complement(4719..4988)
                     /locus_tag="PXB09_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233277.1"
                     /translation="MDAAMSLRFDKLRFVKRLQEANQTPEMAEAFANALDEALEQSQS
                     PLATKADLQLELEKLKNEINTTIFKAITLNITILGFLMAIMKFIN"
     gene            complement(5086..5682)
                     /gene="grpE"
                     /locus_tag="PXB09_001147"
     CDS             complement(5086..5682)
                     /gene="grpE"
                     /locus_tag="PXB09_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDL5233278.1"
                     /translation="MTTQNEHLQEEVKQEEIQPEVVTEETQAEEQNTPQEEPLALAQA
                     RIAELEAYIAEADKREQDIQLRAQAEIQNIRRRAEQDVEKAHKFALEKFSKELLTVVD
                     NLERGLDALDKAVTDETTQALVDGVEMTHKEFINTLAKFGVVAIGEVGEAFNPELHEA
                     ISMQPAEGIEANHVSTVLQKGYTLHGRVIRPAMVMVAN"
     gene            5904..6998
                     /locus_tag="PXB09_001148"
     CDS             5904..6998
                     /locus_tag="PXB09_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDL5233279.1"
                     /translation="MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTV
                     HLYTWTEYVPEGLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDVIAPSNYF
                     VSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYK
                     GETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKL
                     RPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLA
                     IPANAKNKENAHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAIYPSA
                     EVLQKSQWQDDVGDAIELYEKYYQELKAAK"
     gene            7134..8525
                     /locus_tag="PXB09_001149"
     CDS             7134..8525
                     /locus_tag="PXB09_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDL5233280.1"
                     /translation="MNLRWQEYPENARKLFKLSLPIFISQLSASGMGLADIVMAGLVS
                     DDDVSAIAVSNSIYFPLFLFVSGLLNAITPTVSYLNGSSNRHLIANQVRQGYWIVFAM
                     SIPLMAIFLNSHLILDLMQTPAEFSIKSQQYLAVMAVGLIPALLAVSLRCMNDGLSNP
                     KPAMRITFFGLLLNIPLNYIFIFGKFGLPEMGAVGCGVATAIVNLIMFFMLLHYCYTN
                     SAQKDIRLFEKWIDAPSGQILLKLCKLGLPIAFAIFTEVMLFSTSSLFLSPLGSQVVA
                     SHQAALQTSSLFFMIPMSFGIATTIMIGQTLGQKNVEGAKILSYHALITATALAIIAA
                     IIIILLKNFIPFAFTNNPISIAITAHLLIFAAVYQIPDAIQAVANGILRGYKHTQPIL
                     YVTLFCYWGVSMPLGYILARTDWIVQPMAAQGFWLVFCIGLSLAGGLLLWQMRKIQAV
                     PKAQLIAKLERIK"
     gene            8584..12108
                     /gene="recB"
                     /locus_tag="PXB09_001150"
     CDS             8584..12108
                     /gene="recB"
                     /locus_tag="PXB09_001150"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDL5233281.1"
                     /translation="MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNP
                     LTVEQILVVTFTKAATEELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQ
                     IYPLIPNIHEALLRLSIAEREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQS
                     DLLKKLSEEVWREQFYPQDLAITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQD
                     IAEHLAQYQQFINEVKSYWKTHSDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMN
                     QWANSQHNHFPAGLYLFTTEKIAAGTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSA
                     MLQYQFLIALKAKLAEYKQSHPQRSFDDLLTMLNQALKNLHTGEALSQKIRAMYPFAM
                     IDEFQDTDLTQYEIFSQIFMAENAENGFIMIGDPKQSIYKFRGADIFTYLRAAKQADE
                     QFTLGKNWRSLPEVVQAVNNLFSFANDNSPFLYEDIGFHPVEADSQKGQLVSEQGHFV
                     GYITENSKLDDLAEMCAYQIHQQLEAMAQGKFGVEKNGEFQSFAAKDIAILVRKGSQA
                     KRIKKALAKRNIKSVYLAESASVFGSEIATELCWLLQAALNPYHYKALLSALGSTLWG
                     LTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVLPMLHKIYLEQGIIERLKGLENA
                     DRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSPDFNDEQQLRLESEEELIKIV
                     TIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGALDWCLGSEEASFSLQYEAY
                     AEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIPTGKVPVSDYFSQKRIA
                     ANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTSLYAQHERFSEGKSE
                     RVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFFEHCQFNEQIDRE
                     AVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLNEWQFYLRLKN
                     DKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLIDYKSNFLG
                     YLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGVAYLFLR
                     AMNGENDNGVYFDKPTKQLIEEMDRLFG"
     gene            complement(12150..12632)
                     /gene="greB"
                     /locus_tag="PXB09_001151"
     CDS             complement(12150..12632)
                     /gene="greB"
                     /locus_tag="PXB09_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDL5233282.1"
                     /translation="MAKSNYITRSGWQALDQELKFLWREERPKVTQAVSDAAALGDRS
                     ENAEYIYGKRRLREIDRRVRFLSKRLEVLQIVDYHPKQEGKVFFGAWVELENEEGEAK
                     QYRIVGCDEFDPAKNWISIDSPVARALIGKQVDDEIRVETPLGKVLLYINKIWYEQAS
                     "
     gene            complement(12683..13963)
                     /gene="pepB"
                     /locus_tag="PXB09_001152"
     CDS             complement(12683..13963)
                     /gene="pepB"
                     /locus_tag="PXB09_001152"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDL5233283.1"
                     /translation="MTAMKISLSTQNAPEIWGKNAILSANDAGFTVHNPNNDLATIQK
                     AARKIKNQGISTVELTGDSWDLESCWAFHQGFHSVKNQGSVQYPDLDEQQAEFDNRVK
                     CATFVRELINKPSDKLTPEKLAEQAVEFIQKMAKPNTVSYQIIRGEALQEQGYHGIWT
                     VGKGSANPPAFLVLDFNPTNDENAQVLACLVGKGITFDTGGYSLKPSDSMSTMRTDMG
                     GAALLTGSLAFAIARGLNKRVKLYLCCAENMVSHNAFKLGDIITYRNGVTVEVLNTDA
                     EGRLVLADGLIDACKQNPQFIIDAATLTGAAKVAVGNDYHSVLSMDDNLTEALFKSAK
                     TENEPFWRLPFEEFHRGQIASSFADIANIGSVPVGAGASTATAFLSYFVENYQQNWLH
                     IDASATFRKTASDLWAAGATGLGIRTVANLLLSK"
     gene            complement(14102..14923)
                     /locus_tag="PXB09_001153"
     CDS             complement(14102..14923)
                     /locus_tag="PXB09_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDL5233284.1"
                     /translation="MKNIKLSAMSLTALFVLTACSHTHKNSDEHHQMVLQEQATLGIN
                     WMQQSGEYQALAHQAFNAAKVAFDQAKVKKGKKKAVVVDLDETMVDNSLYAGWQVKNH
                     KPFDGESWTRWVNARQTGAIAGAVEFNNYVNSHKGTMFYVSNRKDSSEKAGTIDDMNK
                     LGFSGVSEQTLLLKKDKSNKTPRFEEIEKQGYEIVLYIGDNLNDFGDATYRKSNAERR
                     AFVAENSQQFGKKFIMLPNPNYGDWEGGLDKDYYKGNAESRVKIRHNAIKAWDGK"
     gene            15071..16014
                     /locus_tag="PXB09_001154"
                     /pseudo
     CDS             15071..16014
                     /locus_tag="PXB09_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            complement(16127..17290)
                     /locus_tag="PXB09_001155"
     CDS             complement(16127..17290)
                     /locus_tag="PXB09_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5233285.1"
                     /translation="MKRKTLATLVLIAALGIGGYFYYQQQTNKPQIHYITQAVTRAEI
                     NKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLSTA
                     QARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKATVDN
                     IKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADL
                     SKMLIKLEISEGDIAQVKVGQKVKFSTLAEPNREYSATIDSVDPALTTLTDNNYTEQS
                     GNTEAVYYYANVSVDNADNSLRIGMTTQAQITIDKREQVLVVPTSVIKKRGKENYVLV
                     LENEQSVERKIQIGISDTQNTEVLAGLNEGDQVIVTQRADDEKISTARGPRMF"
     gene            complement(17356..18171)
                     /locus_tag="PXB09_001156"
     CDS             complement(17356..18171)
                     /locus_tag="PXB09_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5233286.1"
                     /translation="MTLPFRAIISDLDGTLLNANHKIGDFTIDTLEQLSKKGVDIFFA
                     TGRNHPDVSQIIGKVNVKNAMLVTSNGARANNLEGKKILNHYLPEDLAFELMNIEFDD
                     QNVCLNSYQGDEWFINKEIAELKKFHQDSGFSYQVVNFAHHHGRNTEKVFFIGKTAEA
                     LVPIEHYIRDTYGDRVQMTYSALLCLEVMAKGVCKANALAELVKLRGYTLADCIAFGD
                     GMNDVEMLSLAGKGCLMGNADPRLKAVLPNNEVIGFNKDEAVASYLRATFGIV"
BASE COUNT         4917 a         3802 c         3953 g         5501 t
ORIGIN      
        1 caaaaaaatg tagcaggttt gcttctgaag cgagaggaat aggtattcga gaaaacaagc
       61 ggtcagagtt gcaaaatttt ttacttatct gaccgcttgt tgtataggga atattacttt
      121 atttcattga tcacattcaa aatccgctta tccgaaatcg ggtattttgt gccgagctgt
      181 tgagcgaaca gactgacccg cagttcttcg atcatatatc gaatttccag tacctcgtcc
      241 ggcaccgctt tggattttgg cagtttggca aggagctgtt tatatgcctc ttgcactgct
      301 tccacccgta gcattttggc tcggtcggtg ttgctgtcca ccaacagttt atccaaacgg
      361 cgttcgatag cggtcaaata acggtataaa tctgcaaggc gggcgtagcc ggttttggtg
      421 acaaagtcgg ggtaaatcag cccttcgatt tgggttttga tgtcgcttaa cgcaaacgcc
      481 atcgtaaaat cgagcttgcc ttttaaccgc ttgtttagct cgtaggccag tgtgaggcac
      541 ttttcaacct gtttggcaat ttctacggtt ttatcgttta aatttgcccg cacaaattcg
      601 tgcagttggg tgaatttttc ctccgtccag acaaacccgc cgaactcttc taccagctga
      661 tctaccgcac aggcaatgca gtcgtcaatc agctccaata ctttgccgaa cggggcaaaa
      721 tataagccca gcttggcttt gttcggcagt ttttcgtgta gatatttaat cggcgatggc
      781 acatttagca acagcagacg gcgaagtcct gcctgcattg cacgagcctg ctcaaattcc
      841 gtttcaaaca gtttcacccc cacagccgtt tgttcatcga caatcgcagg gtaggctttc
      901 acgctgaaat gggctttttt ctgctcatag aactgtggca attcggcaaa attccaaata
      961 tgcacaccac tttgctcaat gccgtcatcg gcaatgttgg aaagggtgtt ctgcacctca
     1021 tctttcaagg caaatttcag ctcatcaagg ttttcgctct cttgcagttt cttgccttta
     1081 tcatcaatca cacggaaagt catccgcaaa tgtggcggca gttggcttaa atcccactgt
     1141 tcaggctcga ccaatacacc cgtcattcgg cgtagttcgt ggcttagatt gtccagcaac
     1201 ggttttttaa acggctcggc tcgccctaaa aaggcgtccg cataattcgg cgccggcaca
     1261 aaatttcgcc gtagcgattt cggtaaagat ttaatcagcg agacgatcag ctcgtggcgt
     1321 agccccggaa tttgccaatc gaaaccttcg ggttccactt ggttaagcag cggtagcgga
     1381 atatgcaccg tcacgccatc gtgatctttt ccgacctcaa actgatagct cagtttgagt
     1441 tttaaatcgc cttgatgcca gaaattcggg aaatccagct cgctggcaag gttggcgttg
     1501 tcgttgatca ggaacgattt ttcaaagttc agcagttcag gatctttttt gcttgcctgt
     1561 ttccaccaag tatcaaaatg cttgctcgac acaacttcgg tgccaatccg ctgatcgtaa
     1621 aactcaaaca gcacctgctc gtccaccaaa atatcacggc ggcgggattt gtgttccaat
     1681 gcctcaactt cacggatcaa gcggtgattt tctttgaaaa atttgtaatt gttgtgacat
     1741 tcgccttcca ccaacgccga gcggataaaa atctcacggc tgacggttgg gtctatcgag
     1801 ccataattca ccgagcgttg tgccacaatc ggaatgccgt agagcgacac tttttccgat
     1861 gccattaccg ctccttttga cttcgcccag tgtggttcgc tgtaactgga tttagtgagg
     1921 tgtactgcca acggttccac ccattccggc tcaatgcgag cgaccattcg tccccaaagt
     1981 ttggtagttt ccaccagctc tgcggccatt acccatttcg gctgtttttt gaaaagtgcc
     2041 gagttcggga aaatgaaaaa gtgggcattt cttgctccta aatagtgcat tttttcatta
     2101 tctttcaagc cgatatgcga caacaagccg gcgagcaggg cggtgtgaat cggctgataa
     2161 cttgccggct cactgttaat ttttaagccc atttctctaa ctgcaaggcg gagttggtgg
     2221 tagatatcct gccactcccg cacacggttg tagttcaaat aatccttacg gcagagatta
     2281 cggaactggt ttttcgacag ttctttttgt tgggcttgga taaagtgcca caaattcaca
     2341 aaggctaaga aatcgctctc tttatcggca aaacggcggt gtttatcgtc tgccgactgc
     2401 tgtttttcct gcggacgctc acgagggtct tggattgaga gagctgacac aatcatcatc
     2461 acttcgtgca acgaaccgtt tttcgccgcc tcgatcacca ttctgcctaa gcgaggatcg
     2521 actggcagtt gggcgagttg gcgaccgatt ggggttaatc taaacccatc cccccgttta
     2581 cggggggagg ttgggagggg gggagtgcca tcattagaac ggatttcccc cctccctagc
     2641 cctcccccgc aagcggtgga ggggattttt tcatttggaa taatcgcctg taattcttcc
     2701 aacaaccgaa tcccgtcctg aatttgtcgg ctgtcagggg catcaacaaa cgggaaattg
     2761 gcaatatcac tcaatccaag cgaagtcatt tgtaaaataa ccgctgcaag gttagttcgt
     2821 agaatttcag gatcggtaaa ttgtggacgg ctgttgaaat cctcttctga atagaggcgg
     2881 atacagatcc cttccgaggt tcgcccacaa cgccctttcc gctggttggc ggaggcttgc
     2941 gaaatcggct caatcggcaa gcgttgcact ttggtgcggt agctataacg agaaatacga
     3001 gccgtgccgg tgtcgatcac atatttaata ttcggaatag tgagggaggt ttctgccacg
     3061 ttggtcgcca gaataattcg gtttagccca ccgcttggct ggaaaatccg ttgttgttcg
     3121 gcagccgata agcgggcgta aaggggtaaa atttcgctat gtcgcagttc ctgcttttgc
     3181 aaggcttcgg cagtgtcacg aatttcccgt tcaccgttca taaaaatcag aatatcgcca
     3241 cgcccttcgg cttgcagttc gtccaccgca tttagaatac cttgcagttg atcttgatct
     3301 tccactatcg ggcgataacg cacttccacc gggaatgtcc gaccagagac ttcaataatc
     3361 ggggcgttgt tgaaatgttt ggaaaaacgt tctacatcaa tagttgccga ggtgatgatc
     3421 actttcagat cggggcgttt gtgcagaatt tgtttcagat aacccaaaat aaaatcgttg
     3481 ttcagcgaac gctcgtgagc ttcgtcaata atcagcgtat cgtactgatt taaatagctg
     3541 tcgtgctgga tttccgccag cagaataccg tccgtcatta gcttgattaa gctgttttca
     3601 ctgacttgat cgttaaagcg gactttgtaa ccgaccgtct cgcccagttc cgatttcagc
     3661 tcttcggcaa tgcgagtcgc caccgaacgt gcggcaattc ggcggggctg ggtatgccca
     3721 atcaagccct tcaccccacg cccgagttct aagcacattt tcggtaactg ggtggttttg
     3781 cccgaaccgg tttcccctgc gatcaccacc acctgatttt cgctaatcag ttttaaaatt
     3841 tcctcacggc gagcggaaac aggcagatca gggtagtcaa ttttcaggtt ttgggcgtgc
     3901 tgagttcgtg cgaaaaaacg tgcctgacaa gcggtgagat cttgcgaaat ttctgccaaa
     3961 actgaccgct tgtgatcgat gtttttaata ttttccgccc cttttaagcg accgagcagg
     4021 cggcggaaat cggcggtggt gatattttcc agcttcacaa gcggtggttt cttatgattt
     4081 ttttgcaaag gtgtttccat ttaatttctc ttttgcatta agaccttgtg atttattgta
     4141 gggtgggcgt aagcccacgt aacagaatag ggattttatg cgtggactta cgtccaccct
     4201 acattaggtt ttaccaacaa tcagtgacaa aatccctgcc gcaatcaacg gcccgaccgg
     4261 tacgcctttt aagaacgcca cgccgatcac cgtgccgatt aaaagcccag ttaccaacac
     4321 cggctggctg cccattaaat tcacgcccct gccacctagc cacgctacca gcacgccagc
     4381 aattattgag agtgccattt tccagttcaa tagttgggca agttcgggaa gcgtaattcg
     4441 ccctgaaacc aaggggctaa gtacgccgat ggttaaaatg ataatcccga tttttaagcc
     4501 gtattgatcg acaaagggga taaatttaga aagtaaggtt tgttgcataa tcagcaatac
     4561 ggcggctgaa atagtaaccg cactgttttg gctgatcagc cctaaaataa tcagcaccac
     4621 aagtagaagt gccactgcgt taaattgtaa agtcatagga ttaaaacgta aaaaccctta
     4681 cttcatagaa gtaagggagt ggttaattaa acgttgagct agttaataaa tttcattatt
     4741 gccattaaaa agccaagaat tgtgatattt aaggtaattg ctttaaatat cgtggtattg
     4801 atttcatttt ttagcttttc aagttcaagt tgcaaatcag cttttgttgc tagtgggctt
     4861 tgactttgct ctaaggcttc atcgagagca ttagcaaatg cctcagccat ttcaggtgtt
     4921 tgattggctt cttgcaagcg ttttacaaaa cgtaatttgt caaatcgtag gctcatagct
     4981 gcatccattt caattatcct cttgtggtta agttataaac taatttagca taatcacaag
     5041 caggaatttt aggagatttt gtgatcttcg tcgaaaatcg acaatttagt ttgccaccat
     5101 caccattgcc gggcgaatca ctcgtccgtg aagcgtgtag cctttttgta gcactgtgct
     5161 gacatggttg gcttcaattc cttcggcagg ttgcattgaa atagcttcgt gcaattcagg
     5221 gttaaatgcc tcgcctactt cgccaattgc caccacacca aatttagcca gtgtattgat
     5281 gaattcttta tgagtcattt caacgccgtc aactaacgct tgagtggttt catcggtcac
     5341 ggctttatca agggcatcta atccacgttc aaggttatca accactgtta acaattcttt
     5401 ggagaatttt tctaaagcga atttgtgagc tttttcaaca tcttgctctg cacggcggcg
     5461 gatattttga atttctgctt gagccctaag ctgaatatct tgctcacgtt tgtcggcttc
     5521 tgcaatatag gcttctaact cggcaattcg agcttgagcg agagctaacg gttcttcttg
     5581 aggtgtattt tgttcttccg cttgagtttc ttcagttaca acttcaggtt gaatttcttc
     5641 ttgttttact tcttcttgta agtgttcatt ttgagtggtc attttttatc ctttaaaaga
     5701 ctaatctgga aatgtaaatc ttccttaata tagcgataaa ttaagggatt tcaagcatat
     5761 ctctttcttt ttgcgaaaat aattcacttt ttaatcagaa aaggcttgca aaatacgggg
     5821 gggggcttaa aatgccctag tcttttccgc ccttaggcaa ggctatattt tttaatcact
     5881 tttctttaac ggagaaaact taaatgaaaa aattagcggg tttatttgca gcaggtttag
     5941 caacagttgc attaacagcg tgtaatgaag aaaaagcggc agagccaaaa gcaactgcgg
     6001 ctgaagcaaa acctcaagca acaaatcaaa cagttcacct ttatacttgg actgaatatg
     6061 tgcctgaagg tttgttagat gaatttacga aagaaaccgg cattaaagtt gaagtttcaa
     6121 gtcttgaatc taacgaaaca atgtacgcta aattaaaatt acaaggcaaa gatggcggtt
     6181 atgatgtaat tgctccatca aactactttg tatctaaaat ggcgaaagaa ggaatgttag
     6241 cggaattaga tcacgcacaa cttccggtta ttaaagaatt aaaccaagat tggttaaata
     6301 aaccttacga tcaaggaaac aaatattcat tacctcaatt attaggtgcg ccgggtattg
     6361 catttaatac ggcagattac aaaggtgaaa cattcacttc ttggggtgat ttgtggaaac
     6421 ctgaatttgc aggtaaagta caattattag atgatgctcg tgaagtattc aacattgcgt
     6481 tattaaaatt aggtaaaaac ccaaatacaa ctaatccgga tgaaatcaaa gaagcctttg
     6541 aagagttgaa aaaattacgt ccaaatgtgc tttcatttac ctctgataac ccggcaaact
     6601 catttattgc tggtgaggtt tctgtaggtc agttatggaa cggttctgta cgtattgcga
     6661 agaaagaaaa cgcaccggtt gatatggtat tcccgaaaga aggtcctgtg ctttgggtcg
     6721 atactttagc cattccggca aatgcgaaaa acaaagaaaa tgcacataaa ttaatcaact
     6781 acttattaag tgcaaaagta gctgaaaaat taacgttagc gattggttac ccaacttcaa
     6841 acgtagaagc attaaaagta ttaccgaaag aaattactga agatacagca atttacccat
     6901 ctgcagaggt tttacaaaaa tctcaatggc aagatgatgt tggtgatgca attgagcttt
     6961 acgaaaaata ctaccaagag ttaaaagcag caaaataata gctgattaat tctgaagcct
     7021 ctagggagca atctttagag gctttctctt ttgagttgca aaaaatttgg caaaaacgac
     7081 cgctttctaa ggtacaatca taaaaacata cttagatttt gagagattaa accatgaact
     7141 taagatggca agaatatcct gaaaatgccc gcaaattatt taaactatcc ctacccattt
     7201 ttatttctca gctttcagct tccggaatgg ggctggcgga tattgtaatg gctggcttgg
     7261 tgagtgatga tgatgtctcg gcgattgcgg taagtaattc gatttacttt ccgctctttc
     7321 tgtttgtgtc agggttgctg aatgcaatta ccccaaccgt ttcttactta aacggctcga
     7381 gcaatcgcca tttaattgct aaccaagtaa ggcagggcta ttggattgtg tttgcaatgt
     7441 ctattccatt aatggcaatt ttcctaaaca gccatctgat tttagactta atgcaaacac
     7501 cggctgagtt ttcaatcaaa tcgcaacaat atttagcagt aatggcagtt gggcttattc
     7561 ctgctttgct ggcggtgagt ttacgttgta tgaacgatgg attatctaac cctaaacctg
     7621 cgatgcggat tacctttttc ggtttattgc tgaacattcc gctaaactat attttcattt
     7681 tcggcaaatt tggcttgcct gaaatgggag cggtaggctg tggtgtagca accgcaattg
     7741 tgaacttgat tatgtttttt atgttgttgc attattgcta caccaattct gcccaaaaag
     7801 atattcgttt gtttgagaaa tggattgatg ctccaagcgg tcaaattttg ctaaaacttt
     7861 gcaaattagg gctgccgatt gcctttgcga tttttaccga agtgatgctg ttttcgacct
     7921 catcgctgtt tctgtcacca cttggttcac aggtggtggc tagccaccaa gctgcattgc
     7981 aaaccagctc gctatttttt atgattccga tgtcgtttgg cattgcaacc accattatga
     8041 tcggacaaac acttgggcag aaaaatgtgg agggggcgaa aatcttaagt taccacgcac
     8101 tgattaccgc aaccgcttta gctattattg ccgccatcat tattattttg ttgaaaaatt
     8161 ttatcccttt tgcgtttacc aacaacccga tttcgattgc gattaccgct catttattga
     8221 tttttgcggc ggtttatcaa ataccggatg ccattcaagc ggtagcaaac ggcattctgc
     8281 gtggttataa acatacccaa ccgattttat acgttactct gttttgttat tggggggtga
     8341 gtatgccgct gggctacatt ttggcaagaa ccgattggat tgtacaacca atggctgctc
     8401 aaggtttttg gttagtcttt tgtatcggct taagtttggc tggtggcttg ttattatggc
     8461 aaatgcgaaa aatacaagcg gtgccaaaag cacaattaat tgcaaaatta gaacggatta
     8521 aataacagat tctctgctat ggaacatagc agtgcttttt acttttagaa gataactttg
     8581 ctgatgaaaa acctaaatcc tatccaacta cctttgaata aatccgtttt aatcgaagcg
     8641 tcggcaggta cagggaaaac ctttaccatt gccaacctgt atttgcgttt attgctcggc
     8701 attggttgca acccgttaac ggtggaacaa attttggtgg tgacatttac caaagcagca
     8761 accgaagagt tgaaaaaccg tatccgtaaa aatattcagc aatgtgccga ctttttaaaa
     8821 gatcaagctg atggtttgga agtggaaagt acaaaatcct atcgaaacaa ccttgatttt
     8881 ttggcacaga tttatccgct cattccgaat attcacgaag cattgttacg tttaagtatt
     8941 gccgaacggg aaattgatac cgccagcgtg tttaccattc acggcttttg tcaaaaaatg
     9001 ctggttcagt ttgcgtttga gtcgggcgtg cggtttgact tggatttaca gccaaaccaa
     9061 agtgatctac ttaaaaaatt aagtgaagaa gtctggcgag agcaattcta tccgcaagat
     9121 ttagccatca cttatgcggt tgccgaacaa cttggtacgc cggaatatgc cctcaatgcg
     9181 gtaaggcgtt atttatctac tgaattacct gaaccaaatg cctctttaaa tcaagatatt
     9241 gccgagcatt tggctcaata tcagcagttt attaatgagg tgaaatccta ttggaaaacg
     9301 cattcagatg aactggttga aactatccgc cacgatttaa agcataaaat tacgctgcac
     9361 ggaggttggt atcgagcgac cacttttgaa gccggtgtgg aagtgatgaa ccagtgggct
     9421 aattcgcaac ataaccattt cccggcaggg ctttatttat tcactacaga gaaaattgcg
     9481 gctggcacga aaaagagctg tgagccgata gattcccctc atcttgcaaa aaatcaggct
     9541 tttttgaccg cttacaagga acgttttgaa aacagcttgt cagcaatgtt gcagtatcaa
     9601 tttttaattg ctctcaaagc aaaattggca gagtacaaac aatcgcaccc acaacgcagt
     9661 tttgatgatt tactcacaat gctaaaccaa gcgttgaaaa atctacacac gggcgaagcc
     9721 ttgtctcaga aaattcgggc gatgtatcct tttgcgatga tcgatgagtt ccaagatacc
     9781 gatttaaccc aatatgaaat tttcagccaa atttttatgg cagagaatgc agagaacggc
     9841 tttattatga ttggcgaccc gaaacagtcg atctataaat tccgtggggc ggatattttc
     9901 acgtatttgc gagcagcaaa gcaggctgat gaacaattca cattgggcaa aaactggcgt
     9961 tcgttgcctg aagtggtgca agcggtcaat aatttgtttt cttttgcaaa tgataactct
    10021 ccgtttcttt atgaggatat tggctttcac ccagtggagg ctgatagcca aaaaggtcag
    10081 ttagttagtg agcaagggca ttttgtaggc tacatcacgg aaaacagtaa attagatgat
    10141 ttggctgaaa tgtgtgctta tcaaattcat caacagcttg aggcgatggc tcaaggcaaa
    10201 ttcggagttg aaaaaaacgg cgaatttcaa tcctttgctg caaaagatat tgcgatttta
    10261 gtccgaaaag gttcacaagc taagcgaatc aaaaaggcgt tggcaaaacg taatatcaaa
    10321 tccgtctatt tagctgaatc agcttctgta tttggttcgg aaattgcaac agaattgtgt
    10381 tggttattgc aagccgcact gaatccgtat cattacaagg cattattatc ggcgttaggc
    10441 tcaaccttgt ggggcttaac ggcggcagag atccaccgct ataaggaaaa tgagcaactt
    10501 tgggatctga aagtcaatca gtttgtggaa tacagcaaca tttggaaaga gcagggcgtt
    10561 ctgccgatgt tgcataaaat ctacttggag cagggcatta tcgaacgttt gaaaggtttg
    10621 gaaaatgcgg atcgcttgat tacggattta ttgcatttaa ccgaaatttt gcaggaaacc
    10681 tcgcaagcgt tagagtctga agctgaactg ttgcggtggt atgaaaagca agttaattcg
    10741 cccgatttta atgacgagca acaacttcgg ttggaaagtg aagaggagct aatcaaaatt
    10801 gtgacgattc acggctcgaa aggcttgcaa tatccaattg tttggttacc ttttgtttca
    10861 caaaaaagtg agggagacac gcagacagca ttaagtttat atcgcaattc tcaaggtgcg
    10921 ctggattggt gtttaggctc agaagaggca agtttttcgc tacagtatga ggcttatgcg
    10981 gaagatttac gtttgctgta tgtggcatta acccgcgcgg aatctcagct taacttagtg
    11041 ttgccgaaag agatttccgg ctggtctcca ctccattact tgttagcaga cggggaaata
    11101 cctacaggaa aagtgcctgt ttcagattat tttagccaaa aacggattgc tgctaatttg
    11161 gttgaagtag ccggggaatt acctttctca ctgtgggaag gagaacaatc ttcagacgat
    11221 taccaagcaa aaacctttag tggcaatatc cgtgtggttg gtcaaattac cagctttact
    11281 tcactttatg cccaacacga gcgttttagt gaagggaaat cagaaagggt aatggattta
    11341 gcccaagatc gagatgtaca tatagaaacc attgaggcag gttattcaag tgaaactgcc
    11401 gctttctcgc cattccaatt cccacacggt attaaagtgg gcacggtgtt acatcacttt
    11461 tttgagcatt gccaatttaa cgaacaaatt gatagagagg ctgttgctaa agtatgcgag
    11521 caattagggc taagcgagga atggattgaa ccaacagcat tatggtttga gcgtattcta
    11581 actacccctt tggcagaggc aaatttctgc ttaaaagcga ttgatgaaac caaacgatta
    11641 aacgagtggc aattctattt acgcttaaaa aatgataaag ccttacatca attaaatgcg
    11701 ttattaaagc aacatagccc tttagcaaaa actttacctg aattgcaatt accgcaatta
    11761 gaaggttttg tgcgaggctt tgtagattgt atcgtgcaag tggaggagaa attctactta
    11821 attgattaca aatcgaattt cttaggctat ctgccacaaa attatgcgaa agaacacatt
    11881 caacgggaaa tgggcagaca acgctatgat ttgcaatatc tgctttacac tctcgcctta
    11941 caccgttatc taactgcccg tttaggtgaa aaatacgatt atgaacgaga cttcggcgga
    12001 gtggcttact tgttcttaag ggcaatgaac ggcgaaaatg ataacggcgt ttattttgac
    12061 aagccgacta agcagttgat tgaagaaatg gatcggttgt ttgggtaaat atgtgtaggg
    12121 gcgaaaattt ttcgcccctt tatgggtaat taactcgctt gctcatacca aatcttattg
    12181 atataaagca acactttacc aagcggagtt tctaccctaa tttcatcatc aacctgtttg
    12241 ccgattaagg ctcgggcgac aggggagtca atcgaaatcc agttttttgc tgggtcgaac
    12301 tcatcgcaac caacaatacg gtactgtttt gcctcgccct cttcattttc taattccacc
    12361 caagcgccga aaaagacttt gccttcttgt ttagggtgat aatcaacaat ttgtagcacc
    12421 tctagccgct tagataaaaa acgcacacgg cggtcgattt ctctcaaacg gcgtttgccg
    12481 taaatatatt cggcattttc gcttcgatca cccaatgcgg cagcatcaga caccgcttga
    12541 gtcactttcg ggcgttcttc ccgccataga aattttaatt cctgatctaa ggcttgccag
    12601 cctgaacggg taatgtaatt tgatttagcc atagttattt aattgtttat ggagcaaata
    12661 gtgatttgcc cctacgaagt ttctattttg aaagcaataa attcgctact gttcttattc
    12721 ccagtccggt tgctcctgcc gcccataaat cgctcgccgt tttgcggaat gtggcagagg
    12781 cgtcaatatg tagccagttt tgctggtagt tttctacaaa gtaagataaa aatgcggtgg
    12841 cggtacttgc cccagccccc accggcacag agccgatatt ggcgatgtct gcaaaggaag
    12901 aagcaatttg cccacggtga aattcttcaa acggtaaacg ccagaacggt tcattttccg
    12961 ttttggcaga cttaaatagt gcttcggtta ggttgtcgtc cattgaaagc accgagtggt
    13021 agtcattgcc gactgcgact tttgctgctc ctgtgagggt tgcagcatca ataataaatt
    13081 gtggattttg cttgcacgca tcaattaaac catcggcaag cactaaacgc ccttcagcat
    13141 cggtgtttaa aacttcaaca gttacgccat tgcggtaagt gataatatcg cctaatttga
    13201 acgcattgtg gctgaccata ttttccgcac agcagaggta gagtttcact cgtttattca
    13261 agcctcgagc aatggcaaaa gcaagtgagc cggttaaaag tgccgctccg cccatatcgg
    13321 ttcgcattgt gctcatacta tcgcttggtt ttagactata accgccggtg tcaaaggtaa
    13381 tgcctttgcc gaccaagcaa gccagtacct gtgcgttttc atcgttggtt gggttgaagt
    13441 ctaatactaa gaatgcaggc ggattggcag agccttttcc aactgtccaa atgccgtgat
    13501 agccttgttc ttgtaatgct tcgccacgaa tgatctggta agaaaccgta ttcggttttg
    13561 ccattttttg gataaactcg accgcttgtt cggctaattt ttcaggggtt aatttatctg
    13621 atggcttatt aattaattca cgcacgaaag tggcacattt tacacggtta tcaaattcgg
    13681 cttgctgttc gtctaagtct gggtattgta ccgagccttg attttttacc gaatgaaatc
    13741 cttgatgaaa cgcccagcag gattctaaat cccaactatc gccggtcagc tccacggttg
    13801 aaataccttg atttttaatt ttgcgggcgg ctttttgaat agtggctaaa tcgttgttcg
    13861 gattatgtac ggtaaacccc gcatcatttg cggaaagaat agcattttta ccccaaattt
    13921 caggggcgtt ttgagtagaa agtgaaattt tcattgctgt cattatcggt ttccttagaa
    13981 aatggatttt gctttatcct aacaaacttt tgcaaagttt tatacaaaaa tgaccgcttg
    14041 cagagcatag ccttgacaag cggtcattgt ttcgtgtttt tacaacctga ttaaggacgg
    14101 attatttgcc gtcccaagct ttaattgcat tgtggcggat tttaacacgg ctttcagcat
    14161 tgcctttgta gtaatcttta tctaaaccgc cttcccagtc gccatagttc gggttcggta
    14221 acataatgaa ttttttaccg aattgttggc tgttttcggc tacgaatgca cggcgttccg
    14281 cgtttgattt acggtaagtc gcatcgccga aatcgtttaa gttgtcgcca atatagagca
    14341 cgatttcata gccttgtttt tcgatttctt caaagcgagg ggttttgttc gatttgtctt
    14401 ttttcaacaa gagtgtttgt tcgctcacac cactaaagcc taatttgttc atatcatcaa
    14461 tagtaccggc tttttcactg ctgtctttac ggtttgaaac atagaacata gttcctttgt
    14521 ggctattaac gtagttgtta aattccactg caccggcaat cgctccggtt tggcgggcat
    14581 ttacccaacg agtccagctt tcaccatcaa acggcttgtg gtttttaacc tgccagccgg
    14641 cataaaggct gttgtccacc atagtttcat ctaaatctac taccacggct tttttcttgc
    14701 cttttttcac tttggcttgg tcgaatgcca ctttcgctgc attgaatgct tgatgggcaa
    14761 gagcttggta ttcgccggat tgttgcatcc agtttatccc taatgtagct tgctcttgca
    14821 acaccatttg atgatgctca tcgctgtttt tatgcgtgtg cgaacaagca gttaatacaa
    14881 ataaagctgt gaggctcata gcagaaagtt tgatgttttt catacgtata tccttagttt
    14941 tattgttgat aaacagagcg attataccta aaaagagttg cttatggcta atagtttatt
    15001 gctcctattc acttttaaag caaactaagg tagcctagta acctttttat aacaattaca
    15061 cagaggctat atgcaaacat tattaaaatt tacacaattt atcagcaaaa ccttcgccat
    15121 ttgggtggtg ttttttgctt ttatcgcagc acaatttccg gaaaccttta agcaattcct
    15181 gccttggatt ccttatctgt tagggattgt gatgttggga atggggttaa ccttaacttt
    15241 caaagatttt gccgaggtaa cgaaaaatcc gaaatcagtg attatcggcg tgatcgctca
    15301 attcgtggta tgccgagtgt agcttatgga ttggcaaaag catttaactt acccgcagat
    15361 ttagccattg gtgtgatttt agttggttgt tgcccgggcg gtacttcttc aaacgtgatg
    15421 acctatttgg ctcgtggcaa cacagcgtta tcggtagctt gtaccactat ttcaacttta
    15481 cttgccccag tgctcacgcc ggcaattttc tatttatttg ccagccaatg gttagaaatt
    15541 aatgcaacgg caatgtttat ttcggtgttg caaatggtgc tattgccaat ttttgtgggc
    15601 gtggtgattc gtactatttt caaacaaaaa gtagagcaat ttagccaaac aatgccatta
    15661 atttcagtga ttgcaatcgt attaattgtc acggcggtgg tgtcagttag ccgagatcgt
    15721 attattgaat ccggtttatt aatttttgcg gtagtagcat tacacaacgg tttaggttat
    15781 ttaatcggtt atttggcgag ccgtttatta aaattaccga ttgcagacag caaagcggtg
    15841 gcgattgaag tggggatgca aaactcagga ttgggggcag cacttgccgc attacacttt
    15901 aaagccaacc ctatcattgc ggtgccaagt gcggtattta gcttctggca caatatttca
    15961 ggcccgattt tggcgatgat tttcgctaaa atgaaaaacg ataacgaaaa ataaaattcg
    16021 ttttaataca gacgttttaa tgttttaata aagaatagac aaacggttaa atttttctaa
    16081 ttttttgcaa aatgttcaga aaatttaacc gcttgttgtt tagaatttag aacattcttg
    16141 gtccacgtgc agtgctgatt ttttcatcat ccgctctttg ggtaacaatc acttgatcac
    16201 cctcatttaa gcctgctaat acttcggtat tttgcgtatc cgaaatgcca atttggattt
    16261 ttctttcaac cgactgctca ttttccagca ccaacacata attctcttta ccacgttttt
    16321 tgattacgct ggtgggtaca actaaaacct gttcccgttt atcaatagta atttgggctt
    16381 gagtagtcat tccgatgcgt aaactgttat cggcattatc aacggaaaca ttagcgtagt
    16441 aataaaccgc ttcggtatta cccgattgtt cggtgtagtt attatcggtc agcgtggtga
    16501 gtgccggatc aactgaatca atggtagcac tatattctcg atttggctca gcaagggtgg
    16561 aaaacttaac tttttgcccg actttaacct gtgcaatatc gccctccgaa atttcaagtt
    16621 taatcagcat cttagataaa tctgctacct gtacaatagt tggcgaagtt tgattggaat
    16681 tgaccgtttg cccgacagaa accggtacag acacaatcac gccgtccatt ggcgagataa
    16741 tttgcgtata agttaagttg gttttagcat cgtttaccga aatttcagcc gattttaatt
    16801 gtgctttaat gttatccacc gtggctttgg ctgaagctaa ggtattttta gccgtttcaa
    16861 gatcgtttaa agaggcacta tttgcccgat agagtttatt taagcggttg tagttcgatt
    16921 gagctacttc aagtgcaacc tgtgcagagg tgagctgtgc tttataagaa gaaagccggg
    16981 cttgagcggt gcttaaggtg ttgctctggt tgctggaatc aatatctgca attaaatctc
    17041 cttgcttcac cgattgcccg agctcgacat agagtttttg gattttgccc gaaacttgag
    17101 cccccacttc ggtgcgttta ttcgctcgaa ccgaaccggt tgccagcaca tttttgttaa
    17161 tttctgcccg tgtgacagct tgggtaatgt aatggatttg cggtttattg gtttgttgct
    17221 gataataaaa atagccgcct attccgagag cggcaattag cacaagagtg gctaatgttt
    17281 tacgtttcat actgttcctt gatgatatac aagcggtcaa atttagacaa aaatttgcaa
    17341 aaaagttgct ctcaactaaa caatgccaaa tgtggctcga agatagcttg ccaccgcttc
    17401 atctttgtta aagccaatca cttcattatt cggtaatacg gcttttaaac gtggatcggc
    17461 attacccatt aaacaacctt tgccggctaa acttagcatt tccacatcat tcataccgtc
    17521 accaaaagcg atacaatcgg ctaaggtgta gccccgtaat ttgaccaatt cggcgagagc
    17581 attggcttta cacactcctt ttgccatcac ttcaaggcaa agtagggcag agtaggtcat
    17641 ttgcacacgg tcgccatagg tatcccgaat ataatgttca atcggtacta aagcttcagc
    17701 agttttgccg ataaaaaaca ctttctcggt atttcgaccg tgatgatgag caaaatttac
    17761 tacttgatag ctaaatcctg aatcttgatg gaattttttt aactctgcaa tctctttatt
    17821 gataaaccat tcatcgcctt gatagctgtt taagcacaca ttttggtcgt caaattcaat
    17881 gttcattaat tcaaaggcaa gatcttccgg taaataatgg ttgagaattt ttttaccctc
    17941 taaattgttg gctcttgccc cgtttgaagt gactaacatt gcatttttaa cgtttacttt
    18001 cccaataatc tgagacacat ctggatgatt gcgaccggtg gcgaaaaaaa tatcaacacc
    18061 tttttttgat agttgttcta atgtatcaat agtgaaatca ccaattttat gattggcatt
    18121 taatagtgtg ccatcaagat cggaaataat tgcacgaaat gggagagtca taa
//
LOCUS       DANLTI010000044        17601 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.044, whole genome shotgun sequence.
ACCESSION   DANLTI010000044 DANLTI010000000
VERSION     DANLTI010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17601
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.044"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(716..1408)
                     /locus_tag="PXB09_001157"
     CDS             complement(716..1408)
                     /locus_tag="PXB09_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5233287.1"
                     /translation="MTELTPKQEAFCFAYIETGNASEAYRQAYETEDMKSETVHRKAK
                     ELMDNGKITARIEELKAEHAERHKLTVDDLLKELEEARILAREKENPNAMTQATMGKA
                     KLLGLDKQVTDPCFDGETGKGDMILSVNCSSIKDGKALDETCILKAGTHEFITRDSFI
                     FYRHIRIDSLDEIKANIEAGYFIQKALINDEAYQQILKGVLSSKSVTPRYKRFLKNAI
                     RQSACPDILAEP"
     gene            complement(1405..1830)
                     /locus_tag="PXB09_001158"
     CDS             complement(1405..1830)
                     /locus_tag="PXB09_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233288.1"
                     /translation="MKHELNLAGITALMNEPIKATLSFLDFPHIRIERLHHDNGRPFF
                     IGVLSLDLEDHINIEMAGATGFLEALAIIAYHQQLTATPLLVNDDLLSEINKLPHPQR
                     TNPFIDRHGNEITREQMSKEYREKIDYAFAEKRMAEGKE"
     gene            complement(1837..1989)
                     /locus_tag="PXB09_001159"
     CDS             complement(1837..1989)
                     /locus_tag="PXB09_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233289.1"
                     /translation="MPELLIVLGNRIAKLEQQHNAMPSETDSITLGILRKQLSQLLKV
                     AERIKE"
     gene            complement(2150..2836)
                     /locus_tag="PXB09_001160"
     CDS             complement(2150..2836)
                     /locus_tag="PXB09_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233290.1"
                     /translation="MADHSQFISRLENRIEPKISFQELIQELSNYTNKPFSHIADKLK
                     SLIFSFQQNGIYTNAFVNCTLFEDGESYAIEPKTLHFKDAFDQPKGVLSDVIAQNSID
                     VEHLNAYYVTAREITQLIKTQSPTLLDKLTTKQTQSEISQIQNDYISVYDFIEWASKH
                     YSSLSETANDLNRLLKDKNIQLYRQYGGISPSIDKDNTNLKAAFDFVAINNGYEKQSS
                     SFNFDDDIPF"
     gene            complement(3231..3554)
                     /locus_tag="PXB09_001161"
     CDS             complement(3231..3554)
                     /locus_tag="PXB09_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5233291.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNDVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            complement(3667..3885)
                     /locus_tag="PXB09_001162"
     CDS             complement(3667..3885)
                     /locus_tag="PXB09_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDL5233292.1"
                     /translation="MMREQTTNQIIITDNFSKWLENLKNPIAKATVARRIKNAINGNF
                     GDHKSLAGTGGLYEMRIATGAGYRIYYA"
     gene            complement(4160..5386)
                     /locus_tag="PXB09_001163"
     CDS             complement(4160..5386)
                     /locus_tag="PXB09_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5233293.1"
                     /translation="MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRY
                     ERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISN
                     TYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ
                     YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDL
                     GEFLYTLQNAQIHLQTRYLILWQLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRG
                     IEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLV
                     AHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFV
                     EECSQGSLPQYHLKIA"
     gene            complement(5661..6027)
                     /gene="ssrA"
                     /locus_tag="PXB09_001164"
     tmRNA           complement(5661..6027)
                     /gene="ssrA"
                     /locus_tag="PXB09_001164"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            6193..7152
                     /gene="rpoH"
                     /locus_tag="PXB09_001165"
     CDS             6193..7152
                     /gene="rpoH"
                     /locus_tag="PXB09_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDL5233294.1"
                     /translation="MKKFNENEIEDAEIIDAEPIDVDEIDEEETSVEAMHPALVSGSM
                     PVPQGNLDSYIRMANQYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARG
                     YLGYGLPLADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVK
                     VATTKAQRKLFFNLRKNKNRLAWFNEEEIKKVADDLGVSVEEVREMESRMTGQDLGFD
                     LPAGDDDEDSYAPSMYIEDSSSNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKT
                     RWLDDNKATLQDLADKYNISAERVRQLENAALKKIKEAISLDG"
     gene            7318..7611
                     /locus_tag="PXB09_001166"
     CDS             7318..7611
                     /locus_tag="PXB09_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3144 domain-containing protein"
                     /protein_id="HDL5233295.1"
                     /translation="MTQLSTSVYQRADGFINVANAHLKNIAPNQVSNAMLFGCARFNA
                     YVAASKAEYKQQLADSREEVIQYFVEQYKEMLTANLDEYIQNFERYIEGKKAD"
     gene            complement(7629..7931)
                     /locus_tag="PXB09_001167"
     CDS             complement(7629..7931)
                     /locus_tag="PXB09_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5233296.1"
                     /translation="MNTYNNTLNNKNLEKKQLLMAIQAIPASQDFIWDGKDDDERPVT
                     PSEFSIAMKKRGRPAGSKKELVSLRLDKSVLEAFRASGKGWQSRINQVLSDFVKQV"
     gene            complement(7903..8193)
                     /locus_tag="PXB09_001168"
     CDS             complement(7903..8193)
                     /locus_tag="PXB09_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5233297.1"
                     /translation="MKIYTWDETKRKINLAKHGLDFADADEVLSSPYRFDVEVIRNNE
                     FRIQSFAYSFGRLLVLSLAYTEREDYIRVISFRRASKAEREAYYEYLQQYFE"
     gene            complement(8331..8870)
                     /locus_tag="PXB09_001169"
     CDS             complement(8331..8870)
                     /locus_tag="PXB09_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDL5233298.1"
                     /translation="MLDLTKIKLVITDVDGVLTDGGMYYTDQGEVMKRFHVHDGLGVK
                     MLQSCGIKVAVLSGGDTALLRKRLEVLKIDLALLGKMEKRSACFELMQQAGVTPEQTA
                     YIGDDTLDLPAFEVCGIAIATRNALDYIKEKADWVLQKAGGEGAFREVSDQILEAQGF
                     GEIFKTADGFLTVAGKMAQ"
     gene            8941..9618
                     /locus_tag="PXB09_001170"
     CDS             8941..9618
                     /locus_tag="PXB09_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDL5233299.1"
                     /translation="MSIAENLSQIHQQIQQISEQYQRDNVRLLAVSKTKPVEAIQAAI
                     EAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSNKTKLVAAYFDWIQTVDRLK
                     IAERLNEQRPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAISQLPNLKLRGLMA
                     IPKPESEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGT
                     AIFGARR"
     gene            9803..11650
                     /gene="typA"
                     /locus_tag="PXB09_001171"
     CDS             9803..11650
                     /gene="typA"
                     /locus_tag="PXB09_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDL5233300.1"
                     /translation="MQNVDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVD
                     ERVMDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLL
                     VVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASD
                     EQLDFPIIYASALNGVAGLEHEDLAADMTPLYEAIVKHVQPPQVELDAPFQMQISQLD
                     YNNYVGVIGIGRIKRGSVKPNQAVTIVDSEGKTRQGRIGQVLGHLGLQRFEATEAFAG
                     DIVAITGLGELNISDTICDINAVEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSR
                     QILERLNKELVHNVALRVEETSNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKV
                     IYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGEVRDMIPDGKGRTRLEYVIPS
                     RGLIGFRNEFMTMTSGTGLLYSTFSHYDDVKPGEIGQRKNGVLISNATGKALAYALFG
                     LQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPV
                     RFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKRASRTTTSTSTH"
     gene            complement(11699..12136)
                     /gene="rimI"
                     /locus_tag="PXB09_001172"
     CDS             complement(11699..12136)
                     /gene="rimI"
                     /locus_tag="PXB09_001172"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDL5233301.1"
                     /translation="MIEQIQAEDFEQLFEIEQQAHLVPWSKGTLLNNQGEKYLNLKVV
                     EQNKIVAFAISHIVLDEATLFNIAVAPDFQGKGIGKRLLSELILQLQQRKLTTLWLEV
                     RESNHSARKLYDSLGFNEVTTRKNYYPTPNGSKENAVVMALYL"
     gene            complement(12129..12551)
                     /locus_tag="PXB09_001173"
     CDS             complement(12129..12551)
                     /locus_tag="PXB09_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDL5233302.1"
                     /translation="MNRRDLLLQEMGISQWVLTNPQVLKGDAQIRLNNAVKLVVVCEE
                     DHQHSRLFADILRALKLKNSEYQWLTGEQSQRLVFEHSPIFWLIQAEEQAVKMAKSFT
                     NQTAWKNESWQDLAKSTTKRQLWQQIDTFSAQFGEQRD"
     gene            12681..13670
                     /gene="rsmC"
                     /locus_tag="PXB09_001174"
     CDS             12681..13670
                     /gene="rsmC"
                     /locus_tag="PXB09_001174"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDL5233303.1"
                     /translation="MLSLESEVLERHLALFENKSVLLFGDVRDDFARQLQSRAEKVAV
                     FSSYFDYARHHSEVEFGLECGLSAELAVFYWTKNKQECQFQLLQWLSQCQAGQEMLII
                     GENRAGVRSVEKLLEPFGNIAKIDSARRCGLYHFELQTVPTFDCKKFWKSYRLQDLDV
                     FDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTM
                     SDIHAMALESGRRTLAENQLEGEVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVE
                     ELIFQAKNHLTKGGELRIVANAFLPYPDLLDKAFGKHDVLAKSTKFKVYSART"
     misc_feature    13800..13922
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            13944..14321
                     /locus_tag="PXB09_001175"
     CDS             13944..14321
                     /locus_tag="PXB09_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDL5233304.1"
                     /translation="MKNPIEIYQSQDGKTQVSVQFDKETVWLSLQQMADIFGRDKSVI
                     SRHLRNIYQEGELEREATVAKNATVQIEGAREVVRLKDYLVKGYALNERRLQERGIEF
                     EQVIGLLSQYTGCLSLVGGRKFA"
     gene            14388..14828
                     /locus_tag="PXB09_001176"
     CDS             14388..14828
                     /locus_tag="PXB09_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5233305.1"
                     /translation="MSINISPLASKNLTEWKLLWQQYLDFYQVNLADDIIQSTWQKVS
                     ESENVKGFGAFVDNRMVGFVHIVIHPNTWNLTECCYLEDLFVLAEYRNQGIGKELIEY
                     IYRYAQEKGYNRVYWVTDKNNHQAQQLYNKLANDSGIIQYRKNF"
     gene            14858..15925
                     /gene="hisC"
                     /locus_tag="PXB09_001177"
     CDS             14858..15925
                     /gene="hisC"
                     /locus_tag="PXB09_001177"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5233306.1"
                     /translation="MTISQLSRKNIQALTPYQSARRLGGSGDVWLNANEYALSPNFDL
                     TDRTFNRYPEPQPQAVIEGYARYAGVAPENVLVSRGGDESIELIIRAFCEANDSILYC
                     PPTYGMYAVSADTCGIATKTVPLTADFQLDLAQIKANLEGVKVVFVCSPNNPTGNLIK
                     RSDLFELLQITAGKAIVVVDEAYIEFCPEARLVSELANFPHLAIIRTLSKAFALAGLR
                     CGFTLANAELIGVLQKVIAPYPLPVPVSDIAAQALSPQGIEQMKTRVAEVITLRAELQ
                     KNLENLPLVEQVFDSEANYLLFKCQDGQKVFKALWEQGIILRDQHKALGLQNCIRITV
                     GAREENLRVVEAITALSQFQR"
     gene            16110..17198
                     /gene="hisB"
                     /locus_tag="PXB09_001178"
     CDS             16110..17198
                     /gene="hisB"
                     /locus_tag="PXB09_001178"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDL5233307.1"
                     /translation="MQPTLFIDRDGTLIDEPKTDFQIDSLEKLKFEKNVIPALLKLKG
                     KYRFVMVTNQDGLGTSSFPQADFDKPHNAMMALFNSQGIEFDDVLICPHKPEDGCDCR
                     KPHTKLLQKYIDRQLFDPANSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL
                     LGEAVTNIGERPKRFAEVIRKTKETDIKVQVWLDETGNNEISTGVGFFDHMLDQIATH
                     GGFRMNITTKGDLWIDEHHTVEDTALALGTALKQAIGDKRGIARFGFVLPMDESRAEC
                     AMDLSGRPFIKFKADFKRDKVGDFSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIE
                     SLFKVFGRTLRQCIRIEGNELPSSKGVL"
     gene            17293..17577
                     /locus_tag="PXB09_001179"
     CDS             17293..17577
                     /locus_tag="PXB09_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233308.1"
                     /translation="MIREVIDFIKNNKWYVLLVVLLLGLYFYQFHGGLSSDSEKWDHF
                     GSYIGGIFSAVTLLSVLHGMQLERKGFKEQKEEFENDKRVLEKRRRKEDF"
BASE COUNT         5030 a         3539 c         3800 g         5232 t
ORIGIN      
        1 aaactaagtt aaatgaattt tccttaaatc aaaatatagg ccgttatttt aagcaagaag
       61 tagggattac actccactat aaaggggtat caagttcggt acatgctggc tttacaaaag
      121 gaaatacatt acaagaacaa aaattcattt cactcaaagt tggatatgag tggtaagctt
      181 tatgtaacct gaagctacac ttgaatcggt tcaaacataa tgttactaaa aaagccttga
      241 aacattgatt ttcaaggctt tttaggtatc ggttgaaccg tataggatta taatttggtg
      301 ctggggtcat ctgaattgta tcacttcaag cattgataaa taagggtttt ggttaattca
      361 aattttattt gtactcctaa atatactcct aaaattcaaa gtgccttatt gcttaggcta
      421 ttttgtgtac aattattcgg atcgtgtata gggaaattta gttcgtagtt ttctatagta
      481 gtttaagttt ataaagaaaa aatttaaaac tttttgaaat tttacccact ttacccactg
      541 atttgttgga agccttgata tataaggctt tatagccagt gggaagcaag tgggttacag
      601 tgggttaagt gggtaacttt gatttttacc cactgttagc cacttttaga ggggaaatat
      661 tagcggtttt ggtagtggtt aaagggcaaa aaaggcctta attctcatca acggcttaag
      721 gttcggctag aatatcaggg caagcacttt ggcggattgc attttttagg aagcgtttat
      781 atctaggcgt tactgatttt gacgatagta cgccttttag tatttgttga taggcttcat
      841 cattaattag ggctttttga atgaaataac cggcttctat atttgcctta atctcatcta
      901 acgaatcgat tcttatatgg cggtagaaaa taaagctgtc ccgtgtgata aattcgtgtg
      961 ttcctgcctt taaaatacaa gtttcatcaa gtgctttccc gtctttaatg cttgagcagt
     1021 ttacacttaa aatcatatct cctttaccgg tttcaccatc aaagcacgga tcggtaacct
     1081 gcttatccag ccctagcaac ttcgctttgc ccattgtggc ttgagtcatt gcgttagggt
     1141 tttctttctc tctcgccagt atacgagcct cttccagctc ctttaaaagg tcatcaacgg
     1201 ttaatttatg gcgttctgcg tgttcggctt tcagttcctc aatccttgcc gtaatcttgc
     1261 cgttatccat tagctcttta gcttttcggt ggacggtttc ggacttcata tcttcggttt
     1321 cataggcttg gcggtaggct tcgctagcat tgccggtttc aatataagca aagcaaaaag
     1381 cctcttgttt tggtgtgagt tcggtcattc tttcccctcc gccattcgct tttcagcaaa
     1441 ggcataatcg attttttctc ggtattcttt gctcatctgc tcccgtgtaa tttcgttgcc
     1501 gtgtcggtca ataaatgggt ttgttcgttg tgggtggggg agcttgttga tttcactcaa
     1561 taagtcatca ttcactaata gcggcgtggc ggttagctgt tgatgatagg caataatcgc
     1621 tagagcctct aaaaagcccg tagcccctgc catttcaata ttgatatgat cttcaaggtc
     1681 aagagaaagc acaccgataa aaaacggtct gccgttatcg tggtgcagtc gttcaattcg
     1741 gatatgcgga aaatctaaaa agctcaaggt tgctttgata ggttcattca ttaaagcagt
     1801 aatacccgct aaattaagct cgtgtttcat tttggtttat tcctttattc tttccgccac
     1861 ttttaacagt tggctaagtt gttttcttaa aatgccgagt gtgattgaat cggtttcgct
     1921 tggcattgcg ttatgttgtt gttccagctt cgctattcgg ttgcctagca caattaaaag
     1981 ctcgggcaat gggtaagctc ggtttcagaa tagaggctta aaaacgtgaa tagtctgcta
     2041 aataatcagg tgttatctca gaaaaatcga gctttttccc tagtgctgct tctaattctt
     2101 gtttatttaa aagtaaattt tggaaatcat ttaaattcat tgctgccacc tagaacggaa
     2161 tatcatcatc aaaattaaag ctgcttgatt gtttttcata tccgttatta attgctacaa
     2221 aatcaaaggc tgcttttaaa ttagtattat ctttatcaat gcttggactt attccgccat
     2281 attgtcgata aagctgtata tttttatctt tgagtaagcg gtttaaatcg ttagctgttt
     2341 cactaagact tgagtaatgt ttacttgccc attctatgaa gtcataaaca gaaatataat
     2401 cattttgaat ttggctaatc tctgattgtg tttgcttggt ggttaattta tctaacaagg
     2461 ttggcgattg tgttttaatc agctgtgtta tttctcttgc tgttacgtaa taagcattta
     2521 aatgttcaac atcaatagaa ttttgagcaa taacatcact taaaacgcct ttaggctgat
     2581 cgaaagcgtc tttgaaatgt agtgttttgg gctcaatagc atagctttca ccatcttcaa
     2641 agagagtgca atttacaaaa gcattcgtat atattccatt ttgctgaaag gaaaaaatga
     2701 ggcttttcaa tttatccgct atatgtgaaa aaggtttatt tgtatagttt gataattctt
     2761 gtatcagttc ttgaaagctg attttgggct caatacgatt ttcaagccta gaaataaatt
     2821 gactgtgatc tgccataagc gcccctttaa cgtatccctt tactgtgaga gcgtggaaag
     2881 agaaataaag ggctttctcc tttcgtgccg gttaattact ccgccactat ccacgctaat
     2941 ttgaataaat ccgtatagtt acggattgaa cttgataggt tgtattttgc taattattca
     3001 gataaattac aagtaataag ctgtgtttta ttacagtaaa tcaaaatagg ctaaagatgg
     3061 gtttccggac gctataaaaa agagcattca agcggtcata tttcattaag gttttgcgaa
     3121 tagtgcggaa ttttcggagc agtacgcacg caaggagcaa ataaaaagcc gtcaatatcc
     3181 atcaacggct atttaaaagt gaggttttga caggtagcaa gtgataagtt ttagccattt
     3241 ttgacttgtg gaataagcac taaattgaat gcccctagaa ttttttgaat agtgtcaaag
     3301 cgtggtttgc tgcctttggc tagggtttta tataggctct ctctgcctag ccctgtttgc
     3361 ttggccagct ccgccattcc tcttgctctt gctacatcgt tcaaggcttc taaaaattcg
     3421 tcttggtcgc cctcttttaa cacttccgct aaataggctt gaatagttgc ctcatcggtt
     3481 aaaaactccg ccacgtcaaa agggcgtaaa ccgtgctttt ctgctgcctg ttcattgatt
     3541 tgtattgttt ccattgcttt ctcctgtagt ttttaattca gcccataatg ctttcgcttt
     3601 ctctatatcg gcttgctgtg ttgatttatc gccgccgtgt aacaagatat aaattacatt
     3661 tccttgttat gcgtaataaa ttctatatcc ggctcctgtt gctatccgca tttcataaag
     3721 tccgcctgta ccggctaaag atttatgatc gccaaagttg ccattaatcg cattttttat
     3781 ccgtcttgct accgttgctt ttgcgatagg gttctttaaa ttctcaagcc attttgaaaa
     3841 attatcggta ataataattt gattagtggt ttgctctctc atcattgccg gcttcttatt
     3901 ctatttattg cttattgtat ccattaagat acagtgagca agggtttttg ccatttaccc
     3961 acttttaacc cactttaccc actgtcattt tttctttatt tttcagttag ttataaaaaa
     4021 ataatagtga aaagtgggta aagtgggtaa aaatcgaaaa gtttacagaa ttttcatcaa
     4081 ggggaattac gggcataaaa aagccgtcag gcggtttacc taacggcatt acaagcggtc
     4141 atttttggcg gaaaatttac taggctattt tcaaatgata ttgcggtaag ctaccttgcg
     4201 aacattcctc tacaaaatcc gcccacactt ggagcagttt aaaacgttgc tctaggcgtt
     4261 cgcctctatc ataggcggct ttgattcggt cgctgtttaa atgcgataag gcaacctcga
     4321 ttaaatcgct attgtagcct ttctcattaa gataagtgga ggcgatggcc cgcaagccgt
     4381 gagccactaa tttgcccttg tagcccattc gtttgatcgc accgttggcg gtttgagtat
     4441 tgacgtgcgt ttgtgggttc ttcacgctag ggaataaata cgttttaccg ccacttagct
     4501 ttttaatctc tcgcaaaagt gcgattgctt ggcgtgagag tgtgatttta tgctcaatgc
     4561 ctcgcttcat attttccgcc ggtatcgtcc acagtttggc tttttcgtct atatccgccc
     4621 attttgcctt agccgcttca ttcgggcggg tcattgtgag taactgccac agaattaaat
     4681 agcgtgtctg taaatgaatt tgggcgtttt gtaaggtgta taaaaactcg cctaaatctt
     4741 ccggcttaat ggttttgaaa tgttcaaccg ttgggctatc aaactctttc gcaatattgg
     4801 cggtagggtt aaacggtatc atttcacggt gtacggcaaa catcataatt tcattatgtt
     4861 tttgaattgc ccgttttaac ttctctagtt tgccctcgtc ttggtattgc ttgaatgcct
     4921 tgattgccat tggtgcggtt atttgtgtga taggcattct tccaaagtgc ggcaagaggt
     4981 tatttttaat taaggcgatt acatcttttt ggtagttgtc tgaaaaattc ttcttggtct
     5041 tgcggtgttc cagccacgcc cacgctacat tttcataagt gttgctgatt tcgttggcct
     5101 ttgcctgttc ctgttgttgg cggtgggttt gagggtcgat attttgagcc aataatgccc
     5161 tatattcttc tctaatttct ctcgcttgtg ctaaagaaat atcagggtaa gccccaatgc
     5221 ttaaatcatt ccgctttttt gtgaacggtc tttcatacct aaaccgccac aatttagaat
     5281 ttgaggtaat aacaagtagt aagccgttac cgtctcttaa tgggctgtct tccggtttcg
     5341 cttttcttat ttgggtatcg tttaacggtg tgatttttct agccatagta aacctttagg
     5401 agtataaagc ctaaatctta ggagtatgat tttttgtttg ggagtacaaa actaaaagcg
     5461 ataaagcctt atttgaaaag gctctaaagt ggttttagga gtacgaattt ttgggggtat
     5521 tccggcgtac tcctaaatat actcctaaaa tcttcggatt tgattgtatc gtataggtac
     5581 gcaacggaca ataaaaaagc cttgaaacat tgattttcaa ggctttttag gtatcggttg
     5641 aaccgtatag gattataatt tggtggagct ggggggattt gaacccccgt ccgaaatttc
     5701 tctaccttca gtactacatg tttagtctag tctttaattt cgcttattca cagcggacag
     5761 acacgcaatg aataaactag ctttatttaa tttagtgttt cgatcctaaa gcggcggcgt
     5821 ccacacgatc tcgttttggg tgacttatct ttgccctcgt cttacgagcg gaagctgagg
     5881 agataaggct ttaaagcagg ttattaagct gctaaagcgt attgttcgtc gtttgcgact
     5941 attattttgc ggtttgttta cgaggcctac cgcacctcga catgcacctt gggcttcgcc
     6001 aatcccgtcg aatccaaaat cagccccaaa agtagcggta ttctaaagga aagcggtcga
     6061 atttgcaaaa agttttgcaa gtggcggaac ttagcggtat tgaatagctc gaaataaaat
     6121 catacaaatc ccacaccaga tagatttaac tctgttataa tgtaaacctt gctgagagtg
     6181 aagagaaata gaatgaaaaa atttaacgag aacgagattg aagatgctga aattatagat
     6241 gccgagccga ttgatgttga tgagatagac gaagaagaaa catcggtaga agcaatgcat
     6301 ccggctttgg tttccggctc aatgcctgtg ccgcagggca atttggatag ctacatccga
     6361 atggcaaatc agtatccgat tctcaccgcc gagcaagaaa aagaactggc ggagcgttat
     6421 tattatgatg aagacgttga ggcggcaaaa cagctgatcc tttcccatat gcggtttgtg
     6481 atccatattg ctcgtggcta tttgggctat ggtttaccgc tggcagatct gatccaagag
     6541 ggtaatatcg gcttgatgaa agcggtaaaa cggtttgacc cgaatgtcgg cgtgcggttg
     6601 gtttcttttg cggttcattg ggtgaaagcg gaaattcacg aatatgtgct gaaaaactgg
     6661 cgaattgtga aagtggcaac caccaaagct caacgtaaat tattctttaa tttacgcaaa
     6721 aataaaaacc gcttggcgtg gtttaatgaa gaagagatca aaaaagttgc cgatgattta
     6781 ggggtttcag tggaagaagt acgagaaatg gaatctcgaa tgaccggaca agatttaggt
     6841 tttgacctgc ctgccggtga tgacgatgaa gacagctacg ctccttctat gtatattgaa
     6901 gatagcagct ccaatttcgc cgatgacttg gaagacgaac aacataatgg gcaggcaacc
     6961 gctcaacttg cctatgcgtt agccaccctt gatgaacgta gccaagacat catcaaaacc
     7021 cgctggttag atgacaataa agccacactg caagatttag ccgataaata taacatctcg
     7081 gcagagcggg taagacagct tgaaaatgcc gcattgaaga aaatcaagga agcgatttca
     7141 ttagacggct agaaatgcct acaagcggtg atttttttac tcgctacgct cgcacttcgt
     7201 gccgtcggca gagccaacgt tcaaacgcaa gcgtttgtgc aaaattttac gcaaaaagca
     7261 ccgcttgtat tttgactaaa aatgaggata ctatgattaa cattaccgat aaacaaattg
     7321 acccaacttt ctaccagcgt ctaccagcga gcagacggct ttattaacgt tgccaacgct
     7381 catttaaaaa acattgcccc aaaccaagtc agcaatgcga tgttgtttgg ttgtgccaga
     7441 tttaacgcct atgttgcggc aagcaaggcg gaatataaac agcagttggc cgattccaga
     7501 gaagaagtta ttcaatattt tgtggagcaa tacaaagaaa tgctcactgc aaatttagat
     7561 gaatatatcc aaaacttcga gcgatatatt gaagggaaaa aggcggatta accgcctttg
     7621 ttttgtggtc aaacttgttt tacaaaatca cttaaaactt gattaattct actttgccaa
     7681 cctttacctg aagctctaaa ggcttcaaga acgcttttat caagacgtaa cgaaaccaat
     7741 tctttctttg aaccagctgg tctgccacgt tttttcattg caattgaaaa ctctgatggc
     7801 gtaaccgggc gttcatcgtc atcttttccg tcccaaataa aatcttggct tgccggaata
     7861 gcttgaatag ccataagtag ctgttttttc tctaaatttt tattattcaa agtattgttg
     7921 taagtattca taatatgcct ctctttctgc tttagatgct cgccgaaagc taattactct
     7981 gatgtaatct tccctttctg tatatgcaag tgataatacg agtaaacgtc caaatgaata
     8041 tgcaaaagat tgtattctaa attcattgtt acgaataact tcaacatcaa atcgataggg
     8101 cgatgagaga acttcatctg catcggcaaa atctaatccg tgcttggcta aattgatttt
     8161 gcgtttagtt tcgtcccaag tataaatttt cataattatt gtatatacat aaaataaatc
     8221 taacaagaac taaatttaat ttagcaaaca gtaatttgaa aatcagatta gaaatacatt
     8281 ttttcgatgc agatcgcaaa aataaaatga aatttaactg cttgaagagt ctactgagcc
     8341 attttccccg ctaccgttaa aaaaccatct gcggttttaa aaatttcacc gaatccttga
     8401 gcctccaaaa tttggtcgga gacttcacga aacgcccctt caccaccggc tttttgcaat
     8461 acccaatctg ctttttcttt gatgtaatcg agggcgttac gggttgcaat cgcaatgcca
     8521 cacacttcaa aagccggtaa atctaaggtg tcatcaccaa tgtaagccgt ttgctcaggg
     8581 gtaacaccgg cttgctgcat tagctcaaag caggcggagc gtttttccat tttgcctaac
     8641 aaagcgagat caattttcag cacctctaac cgtttgcgga gcaaagccgt atcgccgccc
     8701 gagagtactg ccactttaat gccacaactt tgtaacatct taacgcctaa accatcgtga
     8761 acgtggaaac gtttcattac ttcgccttgg tcggtgtagt acattccgcc atcggttagc
     8821 acgccgtcca catcggtaat cactaattta atcttggtga gatctaacat ttttttgcct
     8881 caaatatggt atgattttac cattatagct tttttacctc cgtttaccaa aggaaccgaa
     8941 atgtcgattg ccgagaattt atcgcaaatc catcaacaaa ttcagcaaat ttccgaacaa
     9001 tatcaacgag ataacgtgcg tttgttagcc gtctccaaaa ctaaaccagt tgaggcgatt
     9061 caagcggcga ttgaggcagg gcagcgtgca tttggcgaaa attatgtgca ggaagcggtc
     9121 gaaaaaatcg aattttttgc aaatcgcccc gaattagaat ggcattttat tgggccactt
     9181 caatcaaata aaaccaaatt ggtcgctgcc tattttgatt ggattcaaac ggtggataga
     9241 ttaaaaattg ccgagcgttt aaacgaacaa cgcccagcgg ataaagcccc gctcaacgtg
     9301 ctgattcaaa ttaatatcag cgatgaagcc tcgaaatcgg gcattgaacc agatgaaatg
     9361 ctaccacttg cccaagcgat ttctcaatta ccgaatttga aactgcgggg cttaatggcc
     9421 attcccaaac cagaaagcga gccagagcaa caaaaagttg cctttcgcaa aatgcagcta
     9481 ctttttaacc gcttgcaaac agaatttgac gacattgata ccctttcaat ggggatgtcg
     9541 gacgatatgc aagcggcgat tgaatgtggc tcgacaatgg tgcggattgg gactgcgatt
     9601 tttggggcga gacgttagcc agctgagttt ttacataaag ctgatacaag cggtcaaatt
     9661 cgccaaaaac tttgcaaatt ccaccgcttg ttttgtagcc aacagcggaa aaagtctgta
     9721 taattacgcc tcctaatttc ttgactctcg ccagttttga tgggcgagag tttttatttt
     9781 gacttaactt aaagatattc caatgcaaaa tgtagatatt tcaaaattgc gtaacattgc
     9841 aattattgcc cacgttgacc acggtaaaac caccttggtt gataaacttt tacaacaatc
     9901 aggcaccttt ggtgaaactc gtggtgacgt tgatgagcgt gtaatggatt ccaacgatct
     9961 tgaaaaagag cgtggcatta ccattcttgc aaaaaatacg gcaattaact ggaatggtta
    10021 tcacatcaat atcgtagata ccccagggca cgctgacttc ggtggtgagg ttgagcgtgt
    10081 actttcaatg gtagattctg ttctgttagt ggttgatgcc tttgatggcc cgatgccgca
    10141 aacccgtttc gtcacgcaaa aagcgttcgc tcacggttta aaaccaatcg tagtgatcaa
    10201 taaagttgac cgcccaggtg ctcgccctga ttgggtggtg gatcaagtgt tcgacttgtt
    10261 tgtaaattta ggtgcaagtg atgagcagtt agatttccca attatctacg cttcagcctt
    10321 aaatggtgta gcaggcttag aacacgaaga cctagcggca gatatgaccc cactttatga
    10381 agcgattgtc aaacacgttc aaccaccaca agtggaatta gatgcaccat tccaaatgca
    10441 gatttcgcaa ttagactaca acaactatgt gggcgttatc ggtattggac gtatcaaacg
    10501 tggttcggtg aaacctaacc aagcggtaac gattgtagat agcgaaggca aaactcgcca
    10561 aggtcgtatc ggtcaggtgt tggggcattt aggtttacaa cgttttgaag caacagaagc
    10621 ctttgctggc gatattgttg cgattactgg tttaggcgaa ttaaatattt cagatactat
    10681 ttgtgatatt aacgcagtag aggctttacc agcattaagc gttgatgaac caacggtaac
    10741 gatgttcttc tgcgtaaaca cctcgccatt ctgcggtcaa gaaggtaaat ttgtgacttc
    10801 acgccaaatt cttgagcgtt taaacaaaga attagtccac aacgtggcat tgcgtgtgga
    10861 agaaacttcg aacccagacg aattccgtgt gtcaggtcgt ggcgaattac acttatcggt
    10921 attaatcgaa aatatgcgtc gtgaaggtta cgagttagca gtgtctcgcc cgaaagtaat
    10981 ctaccgcgaa gaagacggca aaaaacaaga gccgtttgag caagtgacga ttgatatcga
    11041 agagcaacac caaggttcag tgatggaagc acttggtatc cgtaaaggtg aagtgcgtga
    11101 tatgattccg gacggcaaag gtcgtacccg tttagagtat gtgatcccaa gccgtggctt
    11161 aatcggtttc cgtaacgaat ttatgacgat gacctcaggt actggtttac tttactctac
    11221 attcagccac tatgatgacg taaaaccggg cgaaatcggt cagcgtaaaa acggtgtgtt
    11281 aatttctaac gcaacgggta aggcattagc atacgcatta tttggcttac aagagcgtgg
    11341 aaaattaatg atcgaccacg gtgttgatgt atatgaaggg caaattatcg ggattcacag
    11401 ccgttcaaac gatttaaccg taaactgctt acagggtaag aaattaacca atatgcgtgc
    11461 atcaggtaaa gacgatgcca tcgttttaac cacaccggtg cgtttcactc tagaacaagc
    11521 gttagagttt attgacgatg acgaattagt ggaagtaaca ccacaatcgg tgcgtattcg
    11581 taaacgttta ttaactgaaa acgaccggaa acgtgcaagc cgtactacaa ccagtaccag
    11641 cacgcactaa ctgataaaaa agagcgactg aggtcgctct tttggtttta aattctccct
    11701 acaaatataa cgccattacc accgcatttt ctttgctacc gtttggcgtg gggtaatagt
    11761 ttttgcgggt ggtaacttca ttaaaaccga gtgaatcgta gagttttctg gcagaatggt
    11821 tggattctcg cacttccaac cacagggtgg tgagtttccg ttgttgcagt tgcaaaatta
    11881 attcggaaag taaccgcttg ccaatgcctt tgccttgaaa atcaggagca actgcaatgt
    11941 taaataaggt tgcttcatct agcacgatat gactaatggc aaaagccaca attttgtttt
    12001 gctctaccac ttttaaattc aggtattttt caccctgatt atttaataac gtcccctttg
    12061 accacggcac taaatgggct tgttgctcaa tttcaaataa ctgctcgaaa tcttccgctt
    12121 gaatttgctc aatcacgctg ttctccaaat tgtgccgaaa aagtatcaat ttgttgccaa
    12181 agttggcgtt tggtcgtaga tttggctaaa tcttgccaag actcgttttt ccaagcggtc
    12241 tgattagtaa aactttttgc cattttgacc gcttgttctt ccgcttgaat cagccaaaag
    12301 atcggcgaat gctcaaacac caaacgttgt gattgttcgc cagtcagcca ttgatattcg
    12361 ctgtttttta actttaaagc acgcagaata tcggcaaaga gccggctgtg ttggtgatct
    12421 tcctcacaca ctaccaccaa ttttaccgca ttgtttaggc ggatttgagc atcgcctttt
    12481 agcacttggg gattggttag cacccattgc gaaataccca tttcctgtaa cagtaaatca
    12541 cgacgattca tttaaaacct catcaaattt tgcaaatagt atcaaaactc cgcttgaaca
    12601 gaaacttttt tcaaaaaatt caagatttct gtacttaaat tcggtatatt cacgctaaat
    12661 tttttagata aggtaagaaa atgctctctt tagaaagcga agtacttgaa cgccatttgg
    12721 cgttatttga aaacaagtcg gtgttattat ttggcgatgt gcgagatgat tttgcccgcc
    12781 agctgcaatc tcgtgcggaa aaggttgcgg tattcagtag ctattttgat tacgcacgcc
    12841 accatagtga ggttgaattt ggcttagaat gtggtttgag tgccgagtta gcggtgtttt
    12901 attggacgaa gaacaagcag gaatgccaat tccaactgct acaatggctg tcgcaatgcc
    12961 aagcagggca agaaatgttg attatcggcg aaaaccgagc tggtgttcgt tcggtagaaa
    13021 aactgctcga accgttcggc aatattgcca aaatcgactc tgcacgccgt tgtggtttat
    13081 accattttga gctacagacc gtgccgacat tcgattgcaa aaaattctgg aaatcctacc
    13141 gcttgcaaga cttagatgtg ttcgatctac cagcggtttt tagctcggcg gagctggata
    13201 acggcaccaa attattgctt tcaaccttcg acaaagcaga caggctaaaa ggcaaagtgt
    13261 tagatttagg ctgtggggct ggcgtgattg gggcaacgct caaacaacaa tttccgaaaa
    13321 tcaaactgac gatgagcgat attcacgcaa tggcgttgga atccggcaga cgtactttgg
    13381 cggaaaatca gttagagggg gaagtggtag caagtgatgt gttctctcac attaatgaac
    13441 ggtttgattt aattgtctcc aacccaccat tccacgacgg ggtcgatacc gcctaccgag
    13501 cggtggagga gttgattttc caagctaaaa atcacctaac caaaggcggt gagctgcgaa
    13561 ttgtcgcaaa cgcattcttg ccttacccag atttgctcga taaagccttc ggcaaacacg
    13621 acgtactggc aaaatccacc aagtttaagg tgtattccgc aagaacataa taggcagaac
    13681 aaacggttat aaaaaagccg gtatttgctt aaaaaagtgc ttgatatttc tgccggcttg
    13741 acgtaaattc tgttcatact gttttggagt aatgcaatga atttaaacta cactttacat
    13801 caccaccaca ctttaacctg atatctttcg ggcatttggt gtgtgcggaa gataactctt
    13861 ccgagcaagt gtagcaaatc aataaagatc tctcggaagg caactttcga gagatttttt
    13921 tatagataaa atttgggaat aatatgaaaa acccgattga aatttaccaa agccaagacg
    13981 gcaaaaccca agtttccgtg cagtttgata aggaaacggt gtggctaagt ttacagcaaa
    14041 tggcagatat ttttggacga gataagtctg ttatttctcg gcacttacga aatatctacc
    14101 aagaaggtga actggagcgt gaggcaactg ttgcaaaaaa tgcaacagtt caaattgaag
    14161 gtgctagaga agtcgttcgc ctaaaagact atctggtgaa aggctatgcc cttaacgaac
    14221 gccgtttgca ggaacgaggt atcgagtttg agcaggtgat tggtttgctc agtcaataca
    14281 ctggttgtct tagccttgtt ggtggcagaa agtttgcctg aacaaaaaga actgatgatt
    14341 aaactgattg aacactttat tttattaaaa gcataacagg aaaaaatatg agtattaata
    14401 tttcgccgtt agcctccaaa aatctcactg aatggaaact attgtggcaa caatatttag
    14461 atttttatca agtgaattta gcagatgata ttattcaatc aacttggcag aaagtttcag
    14521 agagtgaaaa tgtaaaggga tttggggctt ttgttgataa cagaatggtt ggttttgttc
    14581 atattgtgat tcacccaaat acttggaatt taactgaatg ctgttatttg gaagatttat
    14641 ttgttttagc tgaatatcgc aaccaaggca taggaaaaga attaattgaa tatatttatc
    14701 gatatgcaca ggaaaaagga tataaccgag tatattgggt aacagataaa aacaatcatc
    14761 aagcacaaca gctttataat aaattagcta atgatagcgg tattattcaa tatcgaaaaa
    14821 atttctaaac tatgtataaa ttatacagga acacaatatg acaatttcac aactttcccg
    14881 taaaaacatt caagctctca ccccttacca atcggcacgg cgtttggggg gtagtggcga
    14941 tgtgtggctg aatgccaatg aatatgccct ttcgccaaac tttgatttaa ccgaccgcac
    15001 ttttaaccgc taccctgaac ctcaaccgca ggcggtgatt gaaggttacg cccgatatgc
    15061 aggcgttgca cctgaaaacg tgctggtttc ccgtgggggc gatgagagca ttgagctgat
    15121 tatccgagcc ttttgcgagg caaacgacag cattctctac tgcccaccaa cctacggaat
    15181 gtacgccgtg agtgccgaca cctgtggcat tgcgaccaaa actgtgcctt taaccgccga
    15241 tttccagttg gatttagccc aaatcaaagc taacctcgag ggcgtgaaag tggtgtttgt
    15301 gtgcagcccg aacaacccga caggcaactt aatcaagcgg tcggatttgt tcgaactttt
    15361 gcaaatcacc gcaggcaaag cgattgtggt ggtggacgaa gcctacatcg aattttgccc
    15421 tgaagctcgc ttggtaagcg agctggcgaa tttcccacat ttggcgatta tccgcaccct
    15481 atccaaagcc tttgccttgg cgggtttgcg ttgtggcttt accttggcaa acgctgagct
    15541 gatcggcgtg ttacaaaaag tgattgcccc gtatccgctg cctgtgcctg tttccgacat
    15601 cgccgcccaa gccctctccc cacaaggcat tgagcagatg aaaacccgtg tggcggaagt
    15661 catcaccctg cgtgccgaat tgcaaaaaaa tctggaaaac ttaccgcttg tagaacaagt
    15721 ttttgacagc gaagccaact acctcctatt caaatgccaa gacggacaaa aagtcttcaa
    15781 agcactttgg gagcaaggca ttattttgcg tgaccaacac aaagcgttag gattgcaaaa
    15841 ttgcattcgg attacggtgg gggcgagaga ggagaatttg agggtggttg aggcgattac
    15901 agcactgagc caatttcaga gatagaattt aacgagcagt attttaagag acatttatag
    15961 cctagcacgg catagccgta ctaggttacg cataagtcag tccctttggg actgaataca
    16021 gagaggcaaa gtctctcact aatgcttaac cccatatgcc ttggcgtgtg gggagagtaa
    16081 tgaataagat acagatacag gagaaaccaa tgcaacccac cctttttatc gaccgtgacg
    16141 gcacgttaat tgatgagcca aaaaccgatt ttcaaatcga cagcttggaa aagctgaaat
    16201 tcgagaaaaa cgtgattcct gccctgctca aactcaaggg caaataccgc tttgtgatgg
    16261 ttacgaacca agacggctta ggcacgagtt cgttcccaca ggcagatttc gacaaaccgc
    16321 acaatgcaat gatggcgttg ttcaactcgc aagggattga atttgatgat gtgctgattt
    16381 gtccacacaa gcccgaagac ggttgcgatt gccgcaaacc gcacaccaaa ctgctacaaa
    16441 aatatatcga ccgccaactg ttcgacccag ccaacagctt tgtgattggc gaccgtgcta
    16501 ccgatgtgca actggcggaa aaccttggca ttcgggcgtt gcaatatcac cctgaaaaac
    16561 tgaactggga tttgattgct gaaaaactac tgggcgaagc cgtcaccaac attggcgagc
    16621 gaccaaagcg ctttgccgaa gttatccgta aaaccaaaga gaccgacatc aaagtgcaag
    16681 tgtggctgga cgaaacaggc aacaacgaaa tcagcaccgg cgtgggcttt ttcgaccata
    16741 tgcttgacca aattgccacc cacggcggtt ttagaatgaa catcaccacc aaaggcgact
    16801 tgtggattga cgaacatcac acggtggaag acaccgccct cgccctcggc accgcattaa
    16861 aacaagcgat tggcgacaaa cgcggcatcg cccgtttcgg cttcgtgttg ccgatggacg
    16921 aaagccgtgc ggaatgtgcg atggacttat caggcagacc tttcatcaag ttcaaagcgg
    16981 atttcaaacg cgacaaagtg ggcgatttca gcaccgagct caccgaacac ttcttccaat
    17041 ccatcgcctt cacgatgctc gccaccctgc acatcaaggc aaaaggcgac aacgaccacc
    17101 acaaaatcga aagcctgttc aaagtcttcg gcagaacact cagacagtgc attcgtattg
    17161 aagggaatga actaccaagc agtaaaggtg tattataatc accgtagggg cgggttttaa
    17221 cccgcccgaa agtgcggttg aaatttgcaa agtttttggg gattttgacc gcttgttata
    17281 aaggatatat tgatgattag agaagttatt gactttataa agaataataa atggtatgtt
    17341 ctgttagttg tattgttatt aggattatat ttttatcagt ttcacggggg attatcctca
    17401 gatagtgaaa aatgggatca ttttggtagc tatattggtg gtatattttc tgctgttact
    17461 ttattgagtg ttttgcatgg aatgcagttg gaacgtaaag gatttaagga gcaaaaagaa
    17521 gaatttgaaa atgacaaaag agtattagaa aagagaagaa gaaaagaaga tttttagcgt
    17581 acatttttta tgatgttaga g
//
LOCUS       DANLTI010000045        17364 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.045, whole genome shotgun sequence.
ACCESSION   DANLTI010000045 DANLTI010000000
VERSION     DANLTI010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17364
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.045"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..462
                     /locus_tag="PXB09_001180"
     CDS             <1..462
                     /locus_tag="PXB09_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233309.1"
                     /translation="YIIDYKLLNIPEEQPNVIIEFMVNKDDNSILGEMTSTALCELIP
                     LTWSFRLESPKPTLLNLIFDRELKLSYLVSGGYTELSTFKIKEINSNLGTLTLTTQED
                     KTGIFPPTIKLINFSSNIEDDIKEIEQSCLNSRKQLWEKRRKMQEEQKIPN"
     gene            579..3443
                     /locus_tag="PXB09_001181"
     CDS             579..3443
                     /locus_tag="PXB09_001181"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDL5233310.1"
                     /translation="MTKQFTMEDRFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIA
                     IPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAA
                     EEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK
                     EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAD
                     GLDYLVVATTRPETMLGDTAVAVHPEDERYQALIGKSVILPLANREIPIIADEYVDRE
                     FGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLSDYTAPI
                     PADYQGLERFAARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSV
                     KPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGN
                     VYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPT
                     DVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKG
                     NVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAHGTDALRFTL
                     TALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTNDKLDLSEGDVEFSLADRWIES
                     QFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKGTDVQRRGASR
                     TLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQFDPLAIDETAES
                     QINFIKEVIVAVRNIRAESNIAPSKGLDLIARNFSADEVSILNANEVLLKSMAKLDSV
                     KVLENGENAPLSVAKLVANGEILIPMAGFINKEAELARLTKEMDKLKGEVARIEGKLS
                     NEAFVAKAPEQVIAKEREKMQEYLSGLEKLQVQYQEIEAL"
     gene            complement(3514..4107)
                     /locus_tag="PXB09_001182"
     CDS             complement(3514..4107)
                     /locus_tag="PXB09_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5233311.1"
                     /translation="MLTDQDIFNRYQTKKSEFEKQADISLIGHSLFDMWGDMENGTPN
                     LAGKTVANLGLSGTSTRQYLDVITRQERIQHVGDNVFIFLGVNDIVKEPDYSPKQVLE
                     WIGEIVDSLRKINPNANFFLLEATPVNNITTTNNAAIKELNAYFEANIPSDLTYVKTW
                     EYFADKEGNLDLTLCHDGLHFTQAGYDRLEAILTKHL"
     gene            complement(4242..5696)
                     /gene="gnd"
                     /locus_tag="PXB09_001183"
     CDS             complement(4242..5696)
                     /gene="gnd"
                     /locus_tag="PXB09_001183"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HDL5233312.1"
                     /translation="MSQKGDIGVIGLAVMGQNLILNMNDNGFKVVAYNRTTSKVDEFL
                     EGAAKGTNIIGAYSLEDLAAKLEKPRKVMLMVRAGEVVDQFIEALLPHLEEGDIIIDG
                     GNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGDESAWQYVKPIFQA
                     ISAKTDKGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFLKDGLGLSYDEMH
                     EIFKEWKNTELDSYLVDITTDILAYKDEDGEPLVEKILDTAGQKGTGKWTGINALDFG
                     IPLTLITESVFARCVSAFKDQRVAASRLFNKEIGKVEGDKKVWVEAVRRALLASKIIS
                     YAQGFMLIREASEQFGWDINYGNTALLWREGCIIRSRFLGNIRDAYEANPYLVFLGSD
                     PYFKDILENCLADWRKVVAKSVEIGLPVPCMASAITFLDGYTSARLPANLLQAQRDYF
                     GAHTYERTDKARGEFFHTNWTGRGGNTASTTYDV"
     gene            complement(5779..6468)
                     /locus_tag="PXB09_001184"
     CDS             complement(5779..6468)
                     /locus_tag="PXB09_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDL5233313.1"
                     /translation="MKTLGILGGMSAESTVSYYLDINRSVNKVLGGNSSAKILISSVN
                     FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFL
                     HILDCVAEAISAQGLQKVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRII
                     FEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQNDNPLPFFDTAAL
                     HSQMAVEFILG"
     gene            complement(6478..7365)
                     /locus_tag="PXB09_001185"
     CDS             complement(6478..7365)
                     /locus_tag="PXB09_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HDL5233314.1"
                     /translation="MNPIQLIEPNINSKIFTIRGEQVMLDVHLAELYQVDTRTFNQAV
                     KRNEERFPDIFRFQLTENEWLSLRSQFVILNENSGRGQHRKYLPYVFTEQGIAMLSAV
                     LRSEVAVQVSIKIMQAFVQMRHLLQTNSGLVQRLESVERKQLEMSGQLEQVFQSLEGN
                     KPKMQGVFFEGETFNAYQFVTELVRGAKSSLILIDNYVDDTVLTLFTKRSHNVSVTIY
                     TKQISKQLALDLEKYNSQYAHINVKIFDKSHERFLIIDEKELYHIGASLKDLGKKWFA
                     FSKMDLSMSRILEKLAENQ"
     gene            complement(7541..8239)
                     /gene="pgl"
                     /locus_tag="PXB09_001186"
     CDS             complement(7541..8239)
                     /gene="pgl"
                     /locus_tag="PXB09_001186"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDL5233315.1"
                     /translation="MNKVIFPTAQAAVEQIAKEFIEYSHQNRPVHISLSGGSTPKLLF
                     KTLAQAPFNTEIQWQNLHFWWGDDRMVAPTDPESNYGEVQKLLFDHIDIPSENIHRIR
                     GEENVEQELARFSAELTACVPNLAFDWIILGMGTDGHTASLFPHQTDFNDQNVAVIAK
                     YPETGQIRISKTASLIEKAKRITYLVTGASKAEILKEIQTTPAENLPYPAAKIQAENG
                     VTEWYLDSEAANLL"
     gene            complement(8379..9866)
                     /locus_tag="PXB09_001187"
     CDS             complement(8379..9866)
                     /locus_tag="PXB09_001187"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDL5233316.1"
                     /translation="MNAENSCIVIFGASGDLTFRKLIPALYNLYKIGRLGEHFSVLGV
                     SRSELTDESFRQKMRDALVKFEKASGEELDKFCEHLYYQAVNTSDAVDYAKLLPRLDE
                     LHDKYQTAGNTLYYLSTPPSLYGVIPECLAAHGLTTEEFGWKRIIVEKPFGYDIETAK
                     KLDVQIHKCFEEHQIYRIDHYLGKETVQNLLVLRFSNGLFEPLWNRNFIDYVEITGAE
                     SIGVEDRGGYYDGSGAMRDMFQNHLLQVLAMVAMEPPAIINANSMRDEVAKVLYCLHP
                     LTEEDVKHNVVLGQYARGTVDGKEVPAYLEEKGVPADSNTETFMAVKCKIDNWRWAGV
                     PFYVRTGKRLPTRVTEIVIHFKTTPHPVFSQNAPENKLIIRVQPDEGISMRFGLKKPG
                     AGFEAKEVSMDFRYSDLSSSSSLLTAYERLLLDALKGDATLFARTDAVHACWKFVQPI
                     LAYKANRGRVYEYESGTWGPTEADKLIARHGKVWRKPSGTMKKKV"
     gene            complement(9941..10759)
                     /gene="cysQ"
                     /locus_tag="PXB09_001188"
     CDS             complement(9941..10759)
                     /gene="cysQ"
                     /locus_tag="PXB09_001188"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDL5233317.1"
                     /translation="MQTLTQPLLENIINIAKAAGEQLKQLYARSVAIKIKADCTPVTE
                     ADLIISQFLTERLKQLTPDIPVLSEEFCDIPFAERQQWQEYWIIDPIDGTQQFINRTG
                     QFSVVIALVQKREGRNQPVLGVIHAPILGKTYFSMEGSGSFLQENGEIRPLVKPKRAE
                     NALLIVTVGSDLHAEQAKNAISAPQIECVKYGSGSLKAGLVAEGKADCYIRFGDTGEW
                     DTAVAEVLLSEMGGKIFDFNFSPLTYNQRESLINPYFVMVADGSIDWDKIFLFK"
     gene            complement(10773..11315)
                     /gene="nudE"
                     /locus_tag="PXB09_001189"
     CDS             complement(10773..11315)
                     /gene="nudE"
                     /locus_tag="PXB09_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDL5233318.1"
                     /translation="MIKQLPEILNIKTVAKSRIFEVQAVDLRFSNGEERTYERLTPNR
                     RSSVMVIPIQNNELIFVKEYAVGSERYELGFPKGIVDAGEEPIESANRELQEEIGFGA
                     KKLDFLRSLYSSPSHMYGLMHLFLAQDLYPSKLEGDEPEPLEIVRYPLDKIDQLLADP
                     DFAEARNLSALFMLREYLKK"
     gene            11403..11819
                     /gene="hslR"
                     /locus_tag="PXB09_001190"
     CDS             11403..11819
                     /gene="hslR"
                     /locus_tag="PXB09_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDL5233319.1"
                     /translation="MKNKHEKEQNDAEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYN
                     GQRAKVSKAVEIGAIIKLRQGNEEKEVEVLALSDQRRGAPEAQLLYSETEKSIKHREA
                     MAFARKANALSMPHPDRRPNKKERRDLIKFKEQEFS"
     gene            12063..12956
                     /gene="hslO"
                     /locus_tag="PXB09_001191"
     CDS             12063..12956
                     /gene="hslO"
                     /locus_tag="PXB09_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDL5233320.1"
                     /translation="MNYTKDNDKLYRYLFKDRAVRGEWVRLNNTFTETLNTHHYPKAV
                     QNLLGEMLVATSLLTATMKFNGNITVQIQGDSPLKLAVVNGNDQQQLRALARVQADIA
                     DTASLAEMIGNGVLVISIIPTDGERYQGVIALDKPTIRECLEDYFARSEQLQTHLVIR
                     TGEFEGKAVAGGMLLQIMPDGTGSRDDFEHLATLTETVKDEELFGLEAEELLYRLYHE
                     EQVEVYPPQDTEFKCGCSRERSGSALLLVPAEEIEEMLEEKQGVIDMQCECCGTQYFF
                     DKAAIEGFKEETEKLSKLGLN"
     gene            complement(13030..13668)
                     /locus_tag="PXB09_001192"
     CDS             complement(13030..13668)
                     /locus_tag="PXB09_001192"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDL5233321.1"
                     /translation="MQNKIDWQKVDGLLPVIVQNAQTCEVLMLGYMNQQALEKTLAEK
                     RVTFYSRTKQRLWTKGETSGNFLNVVDMSLDCDNDTLLILANPIGETCHTGAESCFHQ
                     FEQEQPDWIFFSKLERMIAERKNADPESSYTAKLYAKGTPKIVQKVGEEAVESVIAAM
                     KNDREELVGEVADLMYHLTVLLHNADLSWAEINAKLKERHKGIGLHPEGSNK"
     gene            complement(13696..14082)
                     /locus_tag="PXB09_001193"
     CDS             complement(13696..14082)
                     /locus_tag="PXB09_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5233322.1"
                     /translation="MIKITALDHLVLTVADMQKTIDFYTTILGMQEITFGDNRKALLF
                     GTQKINLHQKGAEILPNAQNADCGTADLCLLTVTPLQEVIYVLQRHQVEILEGGIVPR
                     TGAVGKIESVYCRDPDGNLIEISLYV"
     gene            complement(14079..14852)
                     /gene="hisF"
                     /locus_tag="PXB09_001194"
     CDS             complement(14079..14852)
                     /gene="hisF"
                     /locus_tag="PXB09_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDL5233323.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAQRYAQEGA
                     DELVFYDITASSDSRTVDKSWVERVAQVIDIPFCVAGGIKTIADAEQIFAFGADKISI
                     NSPALANPELITELAKRFGVQAVVVGIDSWFEAETGKYWVNQYTGDEKRTRQTEWQLL
                     DWVEEVQKRGAGEIVLNMMNQDGVRNGYDLVQLKKVREVCQVPLIASGGAGEMVHFRD
                     AFIEANVDGALAASVFHKQIINIGELKEYLAKEGVEVRR"
     gene            complement(14834..15583)
                     /gene="hisA"
                     /locus_tag="PXB09_001195"
     CDS             complement(14834..15583)
                     /gene="hisA"
                     /locus_tag="PXB09_001195"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDL5233324.1"
                     /translation="MQKSIIIPALDLIDGQVVRLHQGDYAKQTTYADDPIAQFADYLA
                     QGAEQLHLVDLTGAKNPAQRQTALIGKIIRETHCKIQVGGGIRTEQDVADLLAVGANR
                     VVIGSTAVKEREMVKGWFKKYGAEKFVLALDVNIDAIGQKIIAMSGWQEASGVSLEEL
                     IEDYQTVGLQHVLCTDISRDGTLAGSNVDLYREICAKYPEIQFQSSGGIGSLADIKAL
                     CGTGVAGVIVGRALLEGKFNVAEAIECWQNG"
     gene            complement(15753..16598)
                     /locus_tag="PXB09_001196"
     CDS             complement(15753..16598)
                     /locus_tag="PXB09_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor protein"
                     /protein_id="HDL5233325.1"
                     /translation="MNEIKLFENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYW
                     SDLKRKIKDEEGGIELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPL
                     KMWLAEVGKERIDEIIDPELTIDRALATYLKKGYSREWINQRLQAIQVRKELTDTWQD
                     HGVQVGREFAILTNEITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAAT
                     KDIAQISHPQGLEENKTVAKRGGNVAKVARESLEAETGKPVITQQNAIDFAAVIEQVA
                     KQVKK"
     gene            complement(16697..17290)
                     /gene="hisH"
                     /locus_tag="PXB09_001197"
     CDS             complement(16697..17290)
                     /gene="hisH"
                     /locus_tag="PXB09_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDL5233326.1"
                     /translation="MTNLTIIDTGCANLSSVKFAFDRLGIRAEISRDLNKIQSADKLL
                     LPGVGTAAAAMAILHDRRLIDTIRNATQPMLGICLGMQLMTDFSHEGDVATLNLMSGK
                     TERLPECGLPLPHMGWNKVQYQADHPLFHDIEQGNHFYFVHSYGVLPNENTIATCDYG
                     VPFSAAIASQNFYGVQFHPERSGEAGAKLLRNFVENV"
BASE COUNT         4827 a         4005 c         3604 g         4928 t
ORIGIN      
        1 tacattatcg actataaatt attgaacata cctgaagagc aaccaaatgt tatcattgaa
       61 tttatggtta ataaagatga caattcgatt ttaggggaaa tgacttcaac agctctgtgt
      121 gagttaatac ctctaacttg gagttttaga ttggaaagcc ctaagccaac attattaaat
      181 cttattttcg atagagagtt gaaattgagt tatcttgtta gtgggggata taccgagcta
      241 tcaacattta aaattaaaga aattaacagt aatctaggaa cactaacatt aactacgcaa
      301 gaagataaaa ccggtatatt tcctccgaca atcaaattaa tcaatttttc atccaatata
      361 gaagatgata ttaaagagat tgagcaaagc tgtttaaata gccgaaagca attatgggaa
      421 aaacgaagaa aaatgcaaga ggaacaaaaa attcccaatt aatcttttag ttgaccttaa
      481 tttaaataac taattaccta taaaagcatt tacggcaaag atctttttta taagattaag
      541 ctagtgaaaa aattattaaa caagagaaaa caaaaccaat gacaaaacaa ttcacaatgg
      601 aagaccgttt taacccttcc gctgtagagc aagcgctcta ccaacactgg gaatcgcaag
      661 gctattttaa gccgagtgaa gatattaatg caccgagcta ctgtatcgct attccgccgc
      721 cgaatgtgac ggggagtttg catatggggc acgctttcca gcaaaccttg atggatacgc
      781 tgattcgttt taaccgtatg gagggcaaca ataccctttg gcaaacagga actgaccacg
      841 cagggattgc cactcagatg gtggtggagc gtaaaatcgc agcggaagaa ggtaaaaccc
      901 gccacgatta tgggcgtgaa gcctttatca acaaaatctg ggattggaaa gcctattcgg
      961 gcggcacgat cagccagcaa atgcgtcgct taggcaactc gattgactgg gatcgtgagc
     1021 gttttacgat ggacgaaggc ttatccaatg cggtaaaaga ggtgttcgtt cgcttgcacg
     1081 aagaaggctt gatttaccgt ggcaaacgcc tcgtaaactg ggatccgaaa ctgcatactg
     1141 cgatttctga cttggaagtg gaaaacaaag aaagcaaagg ctcgctgtgg catttccgct
     1201 atccgctggc taatggtgca aaaaccgcag acggcttgga ttacttagtg gtggcaacga
     1261 cccgtcctga aacgatgttg ggcgatactg cggtggcggt tcaccctgaa gatgagcgtt
     1321 atcaagctct gattggcaaa agcgtaatcc taccgcttgc caaccgtgaa atcccgatta
     1381 ttgccgatga gtatgtggat cgtgagttcg gtacgggcgt ggtaaaaatc acccctgccc
     1441 acgatttcaa cgactacgaa gtgggcaaac gccacggctt gccgatggtg aatgtgatga
     1501 ccttaaatgc cgatattcgt gcagaggccg aaattatcgg cacagacggt aaaccgcttt
     1561 ccgactacac cgccccaatt cctgccgact atcaaggctt agagcgtttt gccgcgcgta
     1621 agaaaattgt ggcagatttt gaagctcttg ggctgttaga tcaaatcaaa ccacacgact
     1681 taaaagtgcc gtatggcgac cgtggtggcg tgccgattga gccgatgctg accgaccaat
     1741 ggtatgtgtc tgtcaaacct ttggcggaag tcgcgaccaa agcggtggaa gacggcgaaa
     1801 tccaattcgt gccgaaacag tacgaaaacc tgtatttctc ttggatgcgt gatattcaag
     1861 actggtgtat ctctcgccaa ttatggtggg gacaccgcat tccagcgtgg tatgacgagc
     1921 agggcaatgt ttatgtagca cgagatgaag cggaagtgcg tgcgaaacac aacttacctg
     1981 cggacttacc attaaagcaa gatgaagacg tactggatac ttggttctcg tctggtctat
     2041 ggacgttctc aacgttaggc tggccagaac aaaccaaaga actgaaaatg ttccacccga
     2101 ccgatgtgct gattaccggt tttgacatca tcttcttctg ggtggctcgt atgattatgt
     2161 tcacgatgca cttcatcaaa gatgaaaacg gcaaaccgca agtgccgttc aaaaccgtgt
     2221 atgtaacagg cttgatccgt gacgagcaag ggcagaaaat gtcgaaatcg aaagggaacg
     2281 tgttagaccc gattgatatg attgacggca tcagtctcga cgatttgctc gaaaaacgta
     2341 caggtaatat gatgcagcca caactggcag aaaaaatcgc taaggcaacc cgcaaagaat
     2401 ttgccgaagg gattgtggca cacggcacag acgctctgcg tttcaccctc accgcccttg
     2461 ccagcaacgg tcgagacatc aactgggata tgaaacgttt agaaggctac cgcaacttct
     2521 gcaacaaact gtggaatgcg agccgttatg tgctgaccaa tgacaagttg gatttaagcg
     2581 aaggcgacgt ggaatttagc cttgccgatc gttggattga aagccaattc aaccgcacgg
     2641 tggaaacttt ccgcaccgca ctcagccaat accgtttcga cttagtggca aatgcgatct
     2701 acgaatttac ttgggatcaa ttctgcgact ggtatttaga gctgaccaaa cctattttct
     2761 tcaaaggcac agatgtacaa cgccgtggcg caagtcgcac gctggtgaat gtattggaaa
     2821 aactcctgcg tttaatccac ccagtaatgc cgttcatcac cgaagaaatc tggcagaaag
     2881 tgaaaggctt tgtaggtatt gaagccgata ccattatgtt gcaaaaattc ccacaatttg
     2941 acccgcttgc cattgatgaa accgccgaaa gtcaaatcaa ctttatcaaa gaagtgattg
     3001 tggcggtgcg taacattcgt gcggaaagca acatcgcacc aagcaaaggt ttagatttaa
     3061 tcgctcgtaa tttctctgcg gacgaagtct ctattctcaa cgctaacgaa gtgttgctca
     3121 aatcgatggc aaaacttgat agcgtgaaag tgctggaaaa tggtgaaaat gcaccgctat
     3181 cggtagcgaa actggtcgca aatggtgaga tcttgatccc aatggcaggc tttatcaaca
     3241 aagaagctga gctagctcgc ctcaccaaag agatggataa acttaaaggt gaagtggctc
     3301 gcattgaagg caaactttca aacgaagcct ttgtcgccaa agccccagag caagtcatcg
     3361 ccaaagagcg tgaaaaaatg caagagtacc tgagtggatt agagaaattg caggtgcagt
     3421 atcaagagat tgaagcactg taattaacta acaagcggtc aggatttgga aattttttgc
     3481 taattcagac cgcttgctta ttgaagcttt tcattataaa tgtttggtta aaatcgcctc
     3541 taggcggtca tagcctgctt gggtgaagtg taatccatcg tggcataaag ttagatctaa
     3601 attcccttct ttgtcagcaa aatattccca cgtttttaca taagtcaaat cagatggaat
     3661 atttgcctca aaatacgcat tgagctcttt tattgcagca ttattggtgg tggtaatatt
     3721 attaaccggt gtggcttcca atagaaaaaa gttggcattt ggattaattt tgcgaagaga
     3781 atccacaatt tcgccaatcc actctaacac ttgttttggc gagtaatccg gctcttttac
     3841 aatgtcatta acgcctagaa aaataaatac attatcgcca acgtgttgaa ttcgctcttg
     3901 tcgggtaatc acatccaaat attggcgggt gctggtgcct gataagccca aattggcaac
     3961 tgtttttcct gctaaattcg gcgtgccgtt ttccatatcg ccccacatat caaacaggga
     4021 atgcccaata agggaaatat ctgcctgttt ttcaaattct gatttttttg tttggtagcg
     4081 attaaaaata tcttgatcgg taagcatagg ttctccttaa atataaatga aaaatcgctc
     4141 cattattata caaacttgta aacattcact ccaagatatt ttgaagaaaa atccaataaa
     4201 aaagccactt aatatcgaat taagtggctc aaaaagatta attacacatc ataagtggtc
     4261 gatgcggtat taccgccacg tcctgtccag ttggtgtgga agaactcacc gcgagctttg
     4321 tctgtacgct cataagtatg agcaccaaag tagtcacgtt gtgcttggag taagtttgcc
     4381 ggtaaacgtg ccgaggtgta gccatctaag aaggtaatgg ctgacgccat acaaggtaca
     4441 ggtaaaccga tttccaccga ttttgccact actttacgcc aatctgccaa gcagttttcc
     4501 aaaatatctt tgaagtatgg gtctgagcct aagaacacta aatatgggtt ggcttcatac
     4561 gcatcacgaa tgttgcctaa gaaacggctg cggataatac aaccttcacg ccataatagg
     4621 gcggtattgc cgtagttgat gtcccaaccg aattgctcag aagcctcacg aatcaacata
     4681 aagccttgtg cataagagat gattttggaa gcaagtaacg cacggcgtac cgcttctacc
     4741 catacttttt tgtcgccttc aactttacca atttctttgt taaacaatct tgaagccgca
     4801 acacgttgat ctttaaacgc agatacgcaa cgggcgaata ccgactcggt aatcagtgtt
     4861 aatggaatgc cgaaatcaag ggcgttaata ccagtccatt tacccgttcc tttttgacct
     4921 gcggtgtcga gaattttctc taccaatggc tcgccgtctt cgtctttgta ggcaagaata
     4981 tcagtggtaa tatccaccaa atagctgtct aattcggtgt ttttccactc tttaaagatt
     5041 tcgtgcattt catcatagct taaacctaaa ccatctttta agaattggta ggcttcacaa
     5101 attaactgca tatcgccata ttcgataccg ttgtgaacca ttttcacaaa atgccctgct
     5161 ccgtcacgac caacccagtc acaacaaggc tcacctttgt cggttttggc tgaaattgct
     5221 tggaaaatcg gcttcacata ttgccacgca gattcatcac cgcccggcat aattgacggc
     5281 ccgtgacgag caccctcttc gccgcccgat acacctgagc cgataaagcg aatgcctttt
     5341 tccgctaacg ctttcacacg gcggttggtg tccggatagt ttgagttacc gccatcaatg
     5401 atgatgtcgc cttcttctaa atgtggcaga agagcctcga taaactgatc caccacctca
     5461 ccggcacgca ccattagcat cactttacgc ggtttttcca acttcgccgc taaatcttct
     5521 aacgagtaag caccgataat gttcgtgcct ttcgccgcac cttctaagaa ctcatccact
     5581 tttgaagtag tgcggttgta cgccaccact ttaaagccgt tgtcattcat attcaaaatt
     5641 aaattttgac ccattacggc gagtccaatc acgccgatat cgcctttttg tgacattgtt
     5701 tgctcctatt gtttttgatt ctatgcaagc ggtcgaattg gtaaaatttt ttgcaaattt
     5761 gaccgcttgt aacatttatt aacctaaaat aaactccacc gccatttggc tgtgtaatgc
     5821 tgctgtatcg aaaaacggta acggattgtc gttttggtta atcagcaacc cgatttcggt
     5881 acaacctaaa atcacacctt ctgcaccttg ttcactaagt tgttgaatag tctgaagata
     5941 aaacgctttg gcactttcag taatcttgcc taaacagagt tcctcgaaaa taatgcgatg
     6001 aatttcttgt tgcgtttcct catctggtac tattgatgtg ataccacgct ccaataaacc
     6061 gtctttgtaa aaattatcac tcatagtaaa ttttgtgcca aggagtgcta ctttctgcag
     6121 accttgagct gaaatcgcct cagccacaca gtccaaaata tgcaaaaacg gcacagagat
     6181 atggctacta atttgatcgg caattttgtg cattgtgttg gttgccaata aaatgccttc
     6241 tgctccggct tgttctagca atctagcttg ttcagataaa atttcagcgg ctgcttgcca
     6301 atttccctgc ttttggcatt gtacaatctc ttcaaaattg acactcgaaa ttaaaatctt
     6361 ggcactgcta tttccaccta atactttatt caccgagcga ttaatatcta aataataaga
     6421 aaccgtgctt tccgcactca ttccacctaa aatgccgagt gttttcatta atatacctta
     6481 ttgattttcc gctaactttt ctaaaatgcg gctcattgat aaatccattt tagaaaaagc
     6541 gaaccatttc ttacctaaat ctttaagtga tgcaccgata tgataaagct ctttttcatc
     6601 aataatcaaa aatcgctcgt gagatttatc aaatattttc acattaatgt gagcatattg
     6661 gctgttatat ttttccaaat ctaatgcaag ttgcttagat atttgtttcg tataaatcgt
     6721 aactgatacg ttatgcgatc gtttcgtaaa taaagttaaa acggtatcat ctacatagtt
     6781 atcaattaaa atcagcgatg attttgcacc tctcactaat tccgtaacaa actgataagc
     6841 gttaaaggtt tcaccttcaa agaaaacccc ttgcatttta ggcttattgc cttcaagaga
     6901 ttgaaacacc tgctctaact gcccagacat ctccaactgt ttacgctcta cactttctaa
     6961 gcgttgtacc aaaccactat ttgtttgcaa aagatgacgc atttgcacaa aggcttgcat
     7021 aatcttaatg ctaacttgca ccgcaacttc actacgcaat actgccgaaa gcattgcaat
     7081 gccttgctcg gtaaagacat aaggaagata tttcctatgt tggccacgcc cactattttc
     7141 gtttaagatc acaaattgtg atcttaaaga tagccattcg ttttctgtta attgaaaacg
     7201 aaatatgtca ggaaatcgct cttcattccg ttttactgct tggttaaagg ttcgagtatc
     7261 tacctgataa agctctgcca aatgaacatc tagcattact tgctcgccac gaatagtaaa
     7321 aattttagag ttaatgtttg gttcaattaa ttgaattgga ttcatctttc ttccttattc
     7381 ttcagtgaag atcacttttg tgatctcaaa ataagaaaga ctatgccaat ttttggccta
     7441 taccacgagc agatttttct gctttttcga tgaatatcac aaaaatactt tgcaacattt
     7501 ttctaaaatt taaccgcttg taaaggtcac tgattgtgac ctagagtaag ttagccgcct
     7561 cactatccaa ataccattcc gttaccccat tttccgcctg aattttggcg gcaggataag
     7621 gtaaattttc tgccggagtg gtttggattt cttttaaaat ttccgctttg cttgctcctg
     7681 tgaccaagta agtgatccgt ttggcttttt caattaaaga tgccgttttg gaaatgcgga
     7741 tctgccctgt ttctgggtat ttggcgatca cggcaacgtt ctgatcatta aaatctgttt
     7801 gatgtgggaa cagtgaggcg gtatgcccgt ctgttcccat tcctaaaata atccaatcaa
     7861 acgccaagtt cggcacacaa gcggtcaatt ctgccgaaaa tcttgcaagt tcttgttcta
     7921 cattctcttc accacgaatg cggtgaatat tttcgcttgg aatgtcgatg tgatcgaaca
     7981 gtaatttctg cacttcgccg tagttacttt cgggatcggt tggggcaacc attcgatcat
     8041 ccccccacca gaaatgcagg ttttgccatt gaatttcggt attaaacggt gcttgagcta
     8101 aggttttgaa taataatttg ggggttgaac caccggaaag ggaaatatgc accgggcggt
     8161 tttgatggct gtattcaata aactctttag caatttgttc aaccgcagct tgggcggtgg
     8221 ggaaaataac tttattcata atttgcctcg ttagatcacc cctctttaga aaagagggga
     8281 gggggagatt tgattacgat ttcaatattt cgtatgagcg tatataactt ctgccaaatc
     8341 tcccctagcc cctctttgct aaagagggga actgaaattt acactttctt cttcattgta
     8401 ccggacggtt ttcgccatac tttgccgtgt ctggcgatta atttatctgc ctcggttggc
     8461 ccccaagtgc cggattcata ttcatacaca cgcccacgat tagctttgta ggctaaaatc
     8521 ggttgcacaa atttccaaca agcgtgtaca gcatcagtac gggcaaataa ggttgcatca
     8581 cctttaagtg cgtctaatag taagcgttca taagcggtga gtaagcttga tgatgaactt
     8641 aaatcagaat agcggaaatc cattgagact tctttcgctt caaagcctgc tcccggtttt
     8701 ttcaagccga aacgcattga aatgccttcg tccggttgca cacgaataat caatttattt
     8761 tccggagcat tttggctaaa taccgggtgt ggtgtagttt taaaatgaat tacgatttcc
     8821 gtcacacggg ttggtaagcg tttaccggtt cgcacataga acggcacacc tgcccaacgc
     8881 cagttatcga ttttacattt taccgccata aaggtttcag tgttggaatc agccggcacg
     8941 cctttttctt ccaagtaagc cggcacttct ttgccgtcta ccgtgccacg agcatactga
     9001 cctaacacca cattgtgttt aacgtcttct tcagttaacg gatgcaagca atatagcact
     9061 tttgcgactt catcacgcat tgaattagca ttaataattg ccggtggctc cattgcaacc
     9121 atggctaata cttgcaataa gtggttttgg aacatatcac gcattgcccc cgagccatca
     9181 tagtaaccgc cacgatcttc aacgccgatg gattctgccc cggtaatttc cacataatca
     9241 ataaaattac ggttccaaag cggttcaaat aagccgttag aaaaacgtaa aacgagtaag
     9301 ttttgtaccg tttctttacc taaatagtgg tcgatacggt agatttgatg ctcttcaaag
     9361 catttgtgga tttgtacgtc taattttttg gcggtttcga tatcgtagcc gaatggtttt
     9421 tcaacaataa tccgtttcca gccaaactct tcggtagtta agccgtgagc ggctaaacat
     9481 tccggaatca cgccatataa acttggtggc gtggagaggt aataaagcgt gttaccggct
     9541 gtttgatatt tatcgtgtag ctcatcaaga cgaggcagca acttggcata atccactgca
     9601 tcagaggtat ttacagcttg gtaataaaga tgttcgcaaa atttatctaa ttcttcaccg
     9661 cttgcttttt caaatttgac taacgcatca cgcatttttt ggcggaaaga ttcgtcggtt
     9721 aattctgaac gagaaacacc taggacggaa aaatgctcgc ccaatctgcc aatcttatat
     9781 aagttataaa gagcaggaat taatttacga aaagttaagt caccggaagc accaaaaatg
     9841 acgatacagc tattttcagc attcatttat ttatcctatt gctaattgtt aaaattttgt
     9901 tgggtgcaag attatcataa aaattgctaa tcggaactac ctatttgaat aaaaatattt
     9961 tatcccaatc tatcgagccg tcagccacca tcacaaaata aggattaatc aaactttctc
    10021 gctgattata agtcagcggc gaaaaattaa agtcgaaaat tttgccgccc atttcactta
    10081 acagcacttc tgccacagca gtatcccatt cgccggtgtc accaaaacgg atataacaat
    10141 cggctttccc ttctgccact aaaccggctt ttagactgcc cgaaccatat tttacacact
    10201 caatttgtgg ggctgaaatg gcatttttag cttgttctgc atgtaaatcg ctgcctacgg
    10261 taacaatcaa aagggcattc tccgcacgtt tcggtttgac aagcggtcga atttctccat
    10321 tttcttgcaa aaagctaccg ctaccttcca tactaaaata ggtttttcct aatatcggag
    10381 catgaataac gcccagcacc ggctgatttc taccctcacg tttttgcact aacgcaatca
    10441 ccactgaaaa ttgaccggtg cggttaataa actgttgtgt gccgtcaatc gggtcgataa
    10501 tccaatattc ttgccattgt tggcgttcgg caaacggaat atcgcaaaac tcttccgata
    10561 ataccggaat atctggtgtg agttgcttca agcgttcagt taaaaattgg ctgataatca
    10621 gatccgcttc cgtcaccggt gtgcaatcgg ctttgatttt aattgccacc gagcgggcat
    10681 aaagctgctt taactgctca ccggctgctt tggcaatatt gataatattc tcgagtaggg
    10741 gttgagttag cgtttgcata atagctcctt gcctattttt ttaagtattc tcgtagcata
    10801 aatagagcgg acaaattccg tgcttcggca aaatcaggat ctgccaataa ttgatcaatt
    10861 ttatccaacg gataacgcac aatttccagc ggttcaggct catcgccttc caattttgat
    10921 gggtacagat cttgtgccaa aaacaggtgc attaagccgt acatatggct tggcgaactg
    10981 taaagcgacc gcagaaaatc taattttttc gccccaaaac caatttcttc ttgtaattca
    11041 cggttcgcac tctcaatcgg ctcttcacct gcatccacaa tgcctttcgg aaaacccagc
    11101 tcgtaacgct ccgagccgac cgcatactct ttcacaaaaa tcagctcgtt gttttgaatc
    11161 ggaatcacca ttaccgaaga acggcgattc ggcgtaagtc gttcgtaagt tcgctcttcg
    11221 ccattagaaa agcgtaaatc gaccgcttgc acctcaaaaa tgcgagattt cgctactgtt
    11281 ttaatgttca aaatttcagg aagttgtttt atcattttat ctcacctttt tgagttattt
    11341 tagttgaaaa atctcacttt cgctctaata tttcgactat tgttttgatt ttaaggcaga
    11401 aaatgaaaaa taaacacgaa aaagaacaaa acgacgccga agttcggcta gataaatggc
    11461 tttgggcggc tcgtttttat aaaacccgtt cgattgccaa agcaatgatt gaagggggta
    11521 aagtccatta taatgggcaa agagctaaag ttagcaaagc ggtggagatc ggtgccatca
    11581 tcaaacttcg ccaaggcaat gaagaaaaag aggtggaagt gttagccctc agtgaccaac
    11641 gccgaggggc tccggaagcc caactgctct acagtgaaac cgaaaaaagc attaaacacc
    11701 gtgaggcaat ggcatttgcc cgcaaagcga atgctctttc aatgccacac cctgatcgcc
    11761 gtccaaacaa aaaagaacgg cgggatttaa tcaaattcaa agagcaagaa tttagctaag
    11821 cccttgcaat cagaaaaata atccctatat tgaatatcct aagtaggggc gaaaaatttt
    11881 tcgcccctat ataattattt cgggcgaaca ttgattcgcc cctacagcgt tcgatttgca
    11941 catttttagc cacaaaatgc aatgcatttt gaacgttggc tttgccaacg gctccgtagg
    12001 agcgaacaaa attagaaata attttgtgag taataatcga ccgcttgcaa cgaggaatca
    12061 aaatgaatta caccaaagac aatgacaaac tctaccgcta tttattcaaa gaccgagcgg
    12121 tacggggcga atgggtgcgt ttaaacaaca cctttaccga gaccttaaac acccatcact
    12181 accctaaagc agtacaaaat ttactcggag aaatgttagt cgcaaccagt ttgctgactg
    12241 caacaatgaa atttaacggc aacattactg tgcagattca aggtgacagc ccgttaaaat
    12301 tggcggttgt gaacggtaac gaccaacagc aactccgtgc tttagcccgt gttcaggcag
    12361 atattgcaga cacagcctcg ttagcggaaa tgatcggcaa tggtgtatta gtgatttcta
    12421 ttatcccaac cgatggtgaa cgttatcaag gggtgattgc tctcgataaa ccaaccattc
    12481 gtgaatgttt agaagattac ttcgcccgct ccgagcaatt acaaacccac ctcgttatcc
    12541 gcacaggcga atttgaaggc aaagcagtgg caggcggtat gttgctacaa attatgccgg
    12601 acggcacagg ctcaagagat gattttgagc atttagccac gctcactgaa accgtaaaag
    12661 atgaagagtt atttggttta gaggcagaag aattgctcta tcgcctctac cacgaagagc
    12721 aagtagaagt ttacccacca caagatactg aatttaaatg tggctgctca agagagcgtt
    12781 caggctccgc attattactg gtgccggcag aagaaatcga agaaatgttg gaggaaaaac
    12841 aaggcgtgat cgatatgcaa tgtgaatgct gcgggacaca atatttcttt gacaaagcgg
    12901 cgattgaagg ctttaaggaa gaaactgaaa aattaagtaa gttagggtta aattaagcta
    12961 aacaagcggt caagtttctt gtcttttttg caatttgtaa aaaaacggtg aaatttgacc
    13021 gcttgcattt tacttatttg agccttctgg gtgtaaccca atccctttgt ggcgttcttt
    13081 tagtttagca ttgatctctg cccacgagag atcggcattg tgcaataaca ccgttaagtg
    13141 atacatcaga tcagccactt caccgaccaa ctcttcccga tcatttttca ttgccgcaat
    13201 cacgctttct actgcctctt cccctacttt ttggacgatt tttggcgtgc ctttggcgta
    13261 aagtttagcg gtataagaac tttccggatc agcattttta cgttcggcta tcattcgttc
    13321 taatttgctg aaaaagatcc aatctggttg ttcttgttca aactgatgaa aacagctctc
    13381 cgcccccgta tggcaggttt cgccgatagg gttagcgagg attaacaggg tgtcgttatc
    13441 acaatccaaa ctcatatcca ccacgtttag gaaattgccc gaggtttcgc ctttcgtcca
    13501 cagccgttgt ttagtacggg agtaaaaagt cactcgcttt tcagccagcg ttttttcgag
    13561 ggcttgttgg ttcatatatc ctaacatcag tacttcgcag gtttgggcgt tttggacgat
    13621 aacgggcagt aagccgtcca ctttttgcca gtctatttta ttttgcattt tttcttcctt
    13681 tttttgaccg cttgtttaga catataggct tatttcaatc aaattaccat cagggtcacg
    13741 gcaataaacc gactcaattt ttcccactgc ccccgtacga ggcacaatcc caccttccaa
    13801 aatctccacc tgatgtcgct gtaacacata gataacctcc tgaagtggag ttaccgttaa
    13861 gaggcataaa tctgccgtgc cacaatcggc attttgggca ttgggtagga tttctgcacc
    13921 tttttggtgg aggttgattt tctgtgtgcc aaacaaaagc gctttgcgat tatcgccaaa
    13981 ggtgatttct tgcataccca aaatggtcgt ataaaaatca atggtttttt gcatatcggc
    14041 aacggttaaa accagatgat ctaaggcagt aatcttaatc atctacgcac ctcaacccct
    14101 tccttcgcca aatattcctt caactcccca atattgataa tttgtttatg aaacacactc
    14161 gctgccaacg caccatccac atttgcctca ataaaagcat cacggaaatg caccatttcg
    14221 cctgcaccgc ctgaggcgat gagtgggact tggcaaactt cacgcacttt tttcagttgc
    14281 accaaatcgt agccgttgcg tacgccgtct tggttcatca tattcagcac gatttcgcct
    14341 gctcctcgct tttgcacttc ctccacccaa tccaacaatt gccattcggt ttggcgggtg
    14401 cgtttttcat cgccggtata ttgattgacc caatatttgc cggtttctgc ctcgaaccag
    14461 ctatcaatac caaccaccac cgcctgcacg ccaaagcgct ttgccagttc ggtaatcagc
    14521 tcggggttgg caagggctgg ggaattgatg gagattttgt ccgctccgaa agcgaaaatc
    14581 tgctccgcat cggcaatggt tttgattccg cctgccacac agaacggaat atcaatcacc
    14641 tgtgccacac gttccaccca gcttttatcc accgttctgc tgtcacttga ggcggtaata
    14701 tcgtaaaaca ccaactcatc cgccccctct tgggcataac gctgggcgag tggcacaatg
    14761 tcgccgatga tttcgtggtt gcggaactgc acgcctttca caacttgccc gtcacgcacg
    14821 tctaaacaag gaattatccg ttttgccaac attcgattgc ctccgctaca ttaaatttac
    14881 cttccaacaa cgcacgaccg acaatcacgc cagccacgcc cgtaccacaa agcgctttga
    14941 tgtcggcaag cgagccgata ccgcctgagg actgaaattg aatctctggg tatttggcac
    15001 agatttctcg atagagatct acatttgaac ctgccagcgt gccgtctcgg gaaatgtcgg
    15061 tgcataaaac gtgttgcaag cccacggttt gataatcttc aatcaactcc tcgagcgaca
    15121 caccacttgc ctcttgccag ccgctcatcg caatgatttt ttgaccgatt gcatcaatgt
    15181 tcacatccag tgccagcaca aatttctccg caccgtactt tttgaaccag cctttaacca
    15241 tttcacgctc ttttaccgca gtcgaaccaa tcaccacacg gtttgctcca acagcaagta
    15301 aatccgccac atcctgctcg gtgcggatac cgccgcccac ttgaattttg cagtgggttt
    15361 cacgaataat tttgccgata agtgcggtct gtctttgagc cggatttttc gcccctgtaa
    15421 gatcgaccaa atgtaactgc tccgcccctt gtgccaagta gtcggcaaat tgggcaatcg
    15481 ggtcatcggc ataagtcgtc tgtttcgcat aatcgccctg atgtaggcga actacttgcc
    15541 catcgataag gtcgagggcg gggataatga tggatttttg catattattg ttcctgtgtg
    15601 cctagcacga gccgtgctag gctgaataat cccagtcgcg ctgcgactgc ctctctaagc
    15661 tacggagtag cttggtttat ctagccccat acggctcgta tggggtacaa gcggtcaaat
    15721 tcttccaaaa acttgcaaaa aaccgaccgc acttatttct tcacctgttt cgccacttgt
    15781 tcaatcaccg cagcgaaatc aatcgcattt tgttgcgtaa tcaccggttt gccggtctct
    15841 gcctccaaac tttcccgagc cacttttgca acatttccgc cccgtttggc aacggtttta
    15901 ttttcttcca agccctgtgg gtggctgatt tgagcgatgt ctttggtggc agcctcagca
    15961 agcatattca gcaccaactc ggtggtcgtc atattgtctc gcagactttc ctttttcagc
    16021 cctttgaaat ccttatattg gcgagtagtc ataccgctcc acgcctgtgt gatttcattg
    16081 gtgagaatcg caaattctct gcccacttgc acaccgtgat cttgccaagt atccgtcagt
    16141 tcttttcgca cctgaatggc ttgcaagcgt tggttaatcc actcacggga atatcccttt
    16201 ttcaagtaag tagccaaagc tcggtcaatg gtcaattcag gatcgataat ctcatcaatc
    16261 cgctctttgc ctacctctgc cagccacatt ttcaacggct cggctttcgg gcttggcaca
    16321 gactgaataa tacggaaaat gccttgtaaa tccgtggcat cggtttcccg catttttccg
    16381 tctggggctt ttaatttcaa ctgtacgatt ttttcgtaca gttcaattcc gccctcttcg
    16441 tccttgattt tccgctttaa atcactccaa taacggcgtg gattgctact ttgcgtcagc
    16501 acctcgataa tgtccaccac cgagaaaaac cactcttctt tttcgctatc ccacaccgag
    16561 cggatttggc tgttttcaaa tagtttaatt tcgttcattt ctcaccttct ttcactggtt
    16621 aaattaacag taattttgtc gaaataaagc gagaaatcaa gccctatttt caaacttttc
    16681 gatcgagatc acaaaatcag acattctcca caaaattcct gagcaacttc gccccagcct
    16741 cgcccgaacg ctcggggtgg aactgtacgc cgtagaagtt ttggctggca atggcagcgg
    16801 aaaacggcac gccgtagtcg caggtggcga tggtgttctc attcggtagc acaccgtagc
    16861 tatgcacaaa atagaaatga ttgccttgct caatgtcgtg aaatagcgga tggtcggctt
    16921 ggtattgcac cttgttccag cccatatgcg gcaacggcaa accgcattca ggcaagcgtt
    16981 cggttttgcc actcattaag ttcagtgttg ccacatcgcc ttcgtgggaa aagtccgtca
    17041 ttaactgcat tcctaagcag atgccaagca tcggctgggt ggcgttgcga atggtgtcga
    17101 taagtcggcg atcgtgcaag atcgccatcg ccgccgctgc tgttcccaca ccggggagta
    17161 gcaatttatc ggcagattgg attttgttga gatctcgcga gatctcagcc cgaatgccaa
    17221 gacggtcaaa agcaaatttg accgaagaca ggttggcaca gcctgtgtcg atgatggtga
    17281 ggttggtcat ttagtttcct gagttaagta tttcttatag tgaagtaaaa ttgactcaat
    17341 atatctgttt ccttcaaaag cttt
//
LOCUS       DANLTI010000046        17054 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.046, whole genome shotgun sequence.
ACCESSION   DANLTI010000046 DANLTI010000000
VERSION     DANLTI010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17054
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.046"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(74..1765)
                     /gene="dld"
                     /locus_tag="PXB09_001198"
     CDS             complement(74..1765)
                     /gene="dld"
                     /locus_tag="PXB09_001198"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDL5233327.1"
                     /translation="MSNNSLISQLTEIVGQSYIITDPTKTEAYRSGYRFGTGSAIAVV
                     KPTTLLEYWNVLKACVAADVIVISQAANTGLTGGSTPSGNDYDRDIVIINTMRMNGIQ
                     LINNANQVVCLPGSTLNELELLLKTHGREPHSVIGSSCIGASVIGGICNNSGGALVQR
                     GPAYTEMALFAQLNEDGTLELKNHLGIDLGDTPEEILENLQAQRYQRKDIQQACGKGH
                     DHAYCNHVRQIDEDSPARFNADPARHYEAAGSAGKLAVFAVRLDTFPLEKDTAVFYIG
                     TNHTDTLNDIRRYMLANFEVLPISGEYIHRDAFDIAADYGKDTFWVIKKLGTHRLPQL
                     FSLKAKVDRMAKKLTFLPANLSDKILQAISKMLPQHLPESLRDYRNQYEHHLIIKMGG
                     KGVQEARDYLARYFADTQKGGYLECNPTESQAAMLHRFAVASAAIRYRAIHDKEVEDI
                     VALDIALRRNDKAWFEVLPPEIESQITHKLYYGHFMCHVFHQDYIVKKGVDCLALEHQ
                     MLELLDKRGAQYPAEHNVGHLYEAKPTLRKFYRQLDPTNSFNPGIGQTSKKKYWK"
     gene            complement(1977..3074)
                     /locus_tag="PXB09_001199"
     CDS             complement(1977..3074)
                     /locus_tag="PXB09_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5233328.1"
                     /translation="MFYSSNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNIKNRVDESTEKAVVQFALDNPAFGQVRVSNELRKQGIFV
                     SAGGFCLCRWFLSLQVVFVSAGGVRSIWLRHHLANFKQRLTALEKLVAEQGIILSEPQ
                     IQALERKKEDEIACGEIETAHPGYLGSQDTFYVGNIKGVGRIYQQTFIDTYSKVAFAK
                     LYTMKTAITAADMLNDKVLPFFESQRLPMLRVLTDRGSEYCGKVENHDYELYLAINDI
                     EHTKTKVKQPQTNGICERFHKTILQEFYQVAFRKRIYMDLEALQADLDEWLMYYNHHR
                     THQGKMCCGRTPMETLVDGKRIWAEKNLSSN"
     gene            3404..4120
                     /locus_tag="PXB09_001200"
     CDS             3404..4120
                     /locus_tag="PXB09_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5233329.1"
                     /translation="MYLMYVDESGSTTDPTQKYFVLSGIAVFERNTHWIEKKMNVIAS
                     QFCQYSEGSDPYFYELHGSPMRSGKSEWRGIPMSERINAIQDCLKLVQSNNIRIFAAV
                     IEQGYSSGQDTITECFEQISSRFDMYLSRLHAQGNTQRGISIFDKSSTEKSIQALART
                     FKNSGHTYGKLRNFSEVPLFLDSKSSRLIQLADLVSYAIFRHYEHNDSSFYDIIRNNF
                     DYHNGRIHGLYLRNKEDIIS"
     gene            complement(4163..5081)
                     /locus_tag="PXB09_001201"
                     /pseudo
     CDS             complement(4163..5081)
                     /locus_tag="PXB09_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700778.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5083..7068)
                     /locus_tag="PXB09_001202"
     CDS             complement(5083..7068)
                     /locus_tag="PXB09_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5233330.1"
                     /translation="MHSILKKILGKSKSSSQSSVKSDNVFSIEQDSEGWLYPKNASQL
                     LNTELRQKYLGLLWQQVSMNRQMFEALYQQPIERYAEMVQLLPASESHHHSHIGGMLD
                     HGLEVIAFSAKVRQNYILPPNVAPEEQSKQRDAWTAAAIYLALVHDIGKVVVDIEITL
                     KDGSRWFAWNGLPPQPYKFKYIKGRDYHLHPVLGGFLANQLIPKSAFDWLGQYPEVIS
                     SLMYAMSGHNDKAGLLSEIVQKADQHSVTLALGGDVNKLVQRPVNSLSKQLVLALRYL
                     LEQKIKLNTPKGPADGWFTEEGLWLVSKTAADNIRAYLLGQGISVPKDNPKLFDEMQS
                     LGIVEESPAGGAIWSCRIQADSGWTPANTFTLLRIKPEVAWENINDRPNYFAGKVKIV
                     EQITEESNIETQSTLVDGTTKPAPLPSVQTGGIIASKEVEISQVETNSDNAPSSEIII
                     NDENDLTSFVLDMFAPTESSEPSLDDISIGKGQEIASMPSKQEVQDKSTTKKLKVTQS
                     AVETPETLTLSELQLQNKENSITGDNFVKWLKSGIATNKFAINKPTAKLHIVEDHLFL
                     VTPVIFEMYLQETGQPYDKETINNLQYDFQGLGIHSPKNTMTNGKPDTINFWKCDVIG
                     PRKTSSLTGYLIKNTRLFFGDKVLLNNHCLTLQKEET"
     gene            complement(7873..8856)
                     /locus_tag="PXB09_001203"
     CDS             complement(7873..8856)
                     /locus_tag="PXB09_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5233331.1"
                     /translation="MNPQSNTQPKFDLYQEVTDKIIAALEQGTAPWLKPWDSVIPYGG
                     MPCNAISGRLYSGINVLLLWLSAAEHGYIQRKWITAKAAIEAGGHVRKGEKATLAVSY
                     RPYDREKTDDDGNLVLDDDGNPVIEHLASIKKHCLFNIEQCEKLPQDWYETVETPEQL
                     TDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHPRNDHIVMPEMKQFHSPQKFHSVL
                     LHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELVAEMGCAFLCSHLGFADVPQNA
                     SYIESWIKVLREDKRAIFRASGKAREACQYMLDALNIAQLADKYEVFEEAA"
     gene            complement(8936..9091)
                     /locus_tag="PXB09_001204"
     CDS             complement(8936..9091)
                     /locus_tag="PXB09_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233332.1"
                     /translation="MEPRTVKVIYDDGDYFFTLINADEQTIRNYYAIGSSIGFDNTRK
                     IVAVEIL"
     gene            complement(9105..9518)
                     /locus_tag="PXB09_001205"
     CDS             complement(9105..9518)
                     /locus_tag="PXB09_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5233333.1"
                     /translation="MKNEHNLEQLKYIWDNRNLENKVYQYLFHICIEPMKKGDWNRYT
                     IWLNFHGNLINVSDVVYRVVESQKLKDDIKIWYDKQYYCRPTKVETTGFISIFLHLFY
                     EGIARILLEQGMITETEAAEKSYNFRAANCFQRLL"
     gene            complement(9633..10475)
                     /locus_tag="PXB09_001206"
     CDS             complement(9633..10475)
                     /locus_tag="PXB09_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233334.1"
                     /translation="MSDSVLNTYFKHALVKAGFPDTLDMEYSLSHCQGDGVAFYGRLG
                     TDDLIQLFNHLNPQKRKQKMFANLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMEL
                     YAKTADQLVFFNDSDARRNWYFPTSKVDKYKALWDGFIEDLEQYIKDISREMESVGYQ
                     IIEASPYQTETVFKFNTEKYLVELKRKPSEFYSELVDWAFGDMCDFEAAIEQICQGQL
                     CYADFEATVTDKKSEIQLGLARLSGISYSPNDRSFSGYRQELIGEAIASARHNAARFA
                     YLHA"
     gene            complement(10739..10981)
                     /locus_tag="PXB09_001207"
     CDS             complement(10739..10981)
                     /locus_tag="PXB09_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233335.1"
                     /translation="MFGKLFYKMNPKVLAKIGEDFRKAGYLMGAGFVGMVISNDQIST
                     SEGFVLFLWGLYIWIIGHIALHHSEKILNSKQGEPK"
     gene            complement(10990..11235)
                     /locus_tag="PXB09_001208"
     CDS             complement(10990..11235)
                     /locus_tag="PXB09_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5233336.1"
                     /translation="MSVHIKLSCVGDILPIKLNEWTPEHRALHHEISHKALEAWQNRD
                     KGTQSVRFMQQMPARQGLHFRFLSVSEQDGKLIVSRS"
     gene            complement(11307..11660)
                     /locus_tag="PXB09_001209"
     CDS             complement(11307..11660)
                     /locus_tag="PXB09_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233337.1"
                     /translation="MSQQTAGWDVIPFESSKTAKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFRALFVAIIAF
                     LCGMATVFGTQLSLI"
     gene            12035..12478
                     /locus_tag="PXB09_001210"
     CDS             12035..12478
                     /locus_tag="PXB09_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233338.1"
                     /translation="MKASRFLGYFSIVTVVFSVVAQAQPNIIVYTTKMYPIQNSQLAS
                     QVYYLDQVENFEEEISRNLSKSPEIAEREIRAFFNSADWKAQEEQLKDAYQGVISGWQ
                     NGIKKVPAVFFNNLQSSPSVIYGMTDIQKALDEWHKWVQQHGESK"
     gene            12475..13416
                     /locus_tag="PXB09_001211"
     CDS             12475..13416
                     /locus_tag="PXB09_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233339.1"
                     /translation="MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCL
                     DYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTELQSLNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA
                     WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     TRTAQPHIYFPAAKKGGVGEWPPGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            13431..15437
                     /locus_tag="PXB09_001212"
     CDS             13431..15437
                     /locus_tag="PXB09_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5233340.1"
                     /translation="MKSQFKFKKTHLLVITVLFSSTSSISFADSITDKLEFSKSDSII
                     SDRVFYQIGGGTGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMILQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSTQPDAKQAQKDLEDKKGKDGRVWVGGQRKGGQNQ
                     DPINVVGDVAKGGFNLLNKRNVLDSSPVSNCEGNLCQTWDTPQAAADFLTKIIGEQSI
                     STCKEDCGTKTSSKAGVGLSPEIEEEHIRTIVKLENVLNMDVPKSELLAELSSSSVPV
                     TRGLIESLRDDPDVELLSQRLSAEIATSKVMEKMLLARRAILAGMREPNVAQNADAQV
                     ELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLDKR
                     VQGLENGNVALTDLETGSNINLSRRNIALSIPNIPNVAALIPTLPNRGGSGVGGNFPS
                     LAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTVVKVTKDTVI
                     TKEDAERDLARRTAIFANNVRQELGDSHWNALPANAQAVLVSYAYNYGSLAKTKSVLD
                     AARRSAQTGDMTALATAVRNRQVDNNGINARRRNQEADYILGKN"
     gene            15458..15886
                     /locus_tag="PXB09_001213"
     CDS             15458..15886
                     /locus_tag="PXB09_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233341.1"
                     /translation="MRKLLVITALTLCTTPVFAADKNVIFSCTSTEGKPLTVKRVGND
                     YEYSYDKTTFKNPIKKAVTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKE
                     FIEPGATISQSKEQPSIGSVDCDTRKKSHYKFDVHLMNTL"
     gene            16045..16317
                     /locus_tag="PXB09_001214"
     CDS             16045..16317
                     /locus_tag="PXB09_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDL5233342.1"
                     /translation="MATATARFEARMSQEVHMLLKRAASLEGRSLSDFVVGAALSAAR
                     KTVEQNDIIRLSVNDQELFAKALIDPPEPNLAMQKALALSSQILGE"
     gene            16317..16811
                     /locus_tag="PXB09_001215"
     CDS             16317..16811
                     /locus_tag="PXB09_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5233343.1"
                     /translation="MLSGLKIESFSKEFKRDCFDSESELLNQYLKTQVSQDIKRRITS
                     CFLAVNSEQTVVGYYTLASTSLSLSDLPITLQRKLPRYPTVPAVLLGRLAVDKRVKGL
                     GLGQALLGNALKRVLRADIAAYALIVEAKDESAVNFYRKFGFIDFENEARKLFFPLDR
                     VRLS"
BASE COUNT         5148 a         3370 c         3356 g         5180 t
ORIGIN      
        1 attagcaact gttttgtcca cttggcatag tttttgacgg atcagcaact attttgtcta
       61 ctatgccttt ttgttacttc cagtattttt tcttcgaggt ttgcccgatc cccggattaa
      121 agctgttggt tggatcaagc tgccggtaga atttgcgtaa ggtcggtttt gcttcgtaaa
      181 gatgaccgac attatgctcc gcagggtatt gtgccccacg tttatccagt aattctaaca
      241 tctgatgttc caacgccaaa caatctacac cttttttcac aatatagtct tgatggaaaa
      301 catggcacat aaaatgccca taataaagtt tgtgcgtgat ttgactctct atttccggcg
      361 gtagcacttc aaaccacgct ttatcatttc ggcgaagggc aatatctaaa gcaacaatat
      421 cttccacctc tttatcgtga atggctcgat agcgaatcgc tgccgaagca acggcaaaac
      481 gatgtaacat tgccgcttgg ctttcagtcg gattacactc caaataaccg cctttttgtg
      541 tatcagcaaa ataacgggca agatagtctc ttgcttcttg aacgcctttt ccacccattt
      601 tgataattaa gtgatgttca tactggttac ggtagtctcg aagactttcc ggcaaatgtt
      661 gcggtaacat ttttgagatt gcctgtaata ttttatcact gagatttgcc ggtaaaaagg
      721 tgagtttctt cgccattctg tccacttttg ctttaagtga aaagagttgt ggtaagcggt
      781 gtgtaccgag ttttttaatc acccaaaaag tatctttacc gtaatcagcg gcaatatcaa
      841 aggcatcacg atgaatatat tcaccggaaa tcggcaatac ctcaaagttg gctaacatat
      901 agcgacgaat atcgtttaat gtgtccgtat gatttgtccc gatataaaaa acagccgtgt
      961 ctttttcaag cggaaaggta tctaatcgca ccgcaaacac cgctaacttt cctgcactac
     1021 cggcagcctc gtagtggcgg gcaggatcgg cattaaaacg ggcaggggag tcttcatcaa
     1081 tttggcggac gtgattacaa taggcgtgat cgtgtccttt tccgcacgct tgctgaatat
     1141 ccttacgctg ataacgttgg gcttgcagat tttctaaaat ttcttccggc gtatcaccta
     1201 aatcaatacc taaatggttt tttaattcca gcgtgccgtc ttcatttaac tgggcaaaca
     1261 gtgccatttc agtataagcc ggcccacgtt gcactaatgc accccctgaa ttattacaaa
     1321 taccaccgat aaccgaagcc ccgatacagg acgatccgat caccgaatgc ggttcacgtc
     1381 cgtgcgtttt cagcaacaat tccagctcat ttaatgtcga gcccggtaag caaacgactt
     1441 gattggcatt gttaattaac tgaatgccgt tcattcgcat tgtgttaatg atcacaatat
     1501 cccgatcata atcgttgccg cttggtgttg aaccaccggt taatccggta ttggccgctt
     1561 gtgagataac aatgacatcg gcggcgacac aggcttttaa tacgttccag tattctaata
     1621 acgttgtagg ttttaccact gcaatcgcac tacccgtgcc aaagcgatac ccgctacgat
     1681 aggcttccgt cttagtcggg tcagtgatga tataagactg cccgacaatt tcagtaagct
     1741 gagaaatcag tgaattattt gacattatgc ttccctcaaa ggtagaaata gatagggcag
     1801 tatagcaata aacaaaagag agcaaagcag aatgttacaa aattgtgaac tactgcacag
     1861 aataaatgaa gaaatgaagt aaaagaaagc gagctaaaag agcgtcgccc gctttatttg
     1921 tagaaaatca aacctaatct gacagtcccc cgtttaaaat taccgtgtct gtcagattaa
     1981 tttgagctta aattcttttc tgcccaaatg cgttttccat caactaatgt ctccatcggt
     2041 gttcttccac agcacatttt tccttgatgg gttcgatgat ggttataata cattaaccat
     2101 tcatctaagt cagcttgcaa tgcctctaaa tccatataaa tccgttttct gaatgccact
     2161 tggtagaact cctgcaaaat cgttttgtga aaacgctcac agatgccgtt tgtttgtggc
     2221 tgtttcactt tggtttttgt gtgctctatg tcattgatag ccaaataaag ctcataatcg
     2281 tgattctcaa ctttcccaca atactcactg cctcggtctg tcagcactcg taacataggt
     2341 aacctctggc tttcaaagaa tggtaatact ttgtcattta gcatatcagc agcagtgata
     2401 gccgtcttca ttgtatacag ttttgcaaat gccactttac tataagtatc aataaacgtt
     2461 tgctgataaa tacgacccac acctttaata ttgccgacat aaaaggtatc ttgtgaccct
     2521 aaatagccgg ggtgtgccgt ttcaatttca ccacaggcaa tctcatcttc tttcttccgc
     2581 tccaaggctt gtatctgtgg ctcactcaga ataatgcctt gctctgccac caatttttcg
     2641 agggcagtta agcgttgctt aaaattagct aagtgatgtc tcaaccaaat ggaacgtaca
     2701 ccacctgcag agacaaaaac cacctgcaga gacaaaaacc acctgcagag acaaaaacca
     2761 cctgcagaga caaaaatccc ctgtttacgc agttcattac tcactcgaac ttgaccaaaa
     2821 gcaggattat ctaaagcgaa ttgtacaacc gctttttctg tggattcatc cacacgattt
     2881 ttaatgttgg gaacacgtcg attttgattt agtaatgcct caacaccgcc ttgttcgaca
     2941 gcctgttgat agcgataaaa agtatctcga ctcatcccca ttaccttaca ggcttgtgag
     3001 atattaccca gttcttctgc taaatttaat aaaccggtct tgtgtttaat aagtggattg
     3061 ctagaataaa acatgagagt ttcctttttg tttagattga tttttgacac tcatattcta
     3121 aacgggaaac tctcactttt tagagtgaat tgtcagatca agtctgatct tctacagacg
     3181 atccaggtct tacacattct ttcaagtttg taaagcctga aaattatttt ttatacttga
     3241 tttttgtcaa aaagtctcta cactatatgg cagggtcagt tttcgctgtt taacggtgtt
     3301 taatgagatt ttcattactg gctctcctta atagaaattt atggaagagc tatctgatag
     3361 agtaatctag cgatagctct ttttcattga acaaagaggc tatatgtatc ttatgtatgt
     3421 tgatgagtct ggttctacga cagatcctac tcaaaaatat tttgtattat caggtatcgc
     3481 tgtatttgaa cgaaatactc attggattga gaaaaaaatg aatgtgatag cctctcaatt
     3541 ctgtcaatat tctgaaggga gtgatccata tttctatgag ttacatggtt caccaatgag
     3601 atctggaaag agtgaatgga gaggcattcc aatgagtgag cgtattaatg ccattcaaga
     3661 ttgcttgaaa ttagttcaaa gtaataatat tcgtatattt gcagcagtta tagagcaagg
     3721 gtattctagt ggtcaggata ctattacaga atgttttgag caaatatcat ctcgatttga
     3781 tatgtatctg agccgtttac atgcccaagg taatacccaa agaggcattt ctatctttga
     3841 taaatcatcg actgagaagt caatccaagc acttgcaaga acattcaaaa atagtgggca
     3901 tacttatggg aaacttagaa atttctcaga agttccatta tttcttgact caaagtcatc
     3961 gagattaatt cagctagcgg atctagtttc ctatgcgata tttagacact atgaacacaa
     4021 tgatagctca ttttacgata ttataagaaa taactttgat tatcataacg ggcgtattca
     4081 tggtttatat ttacggaaca aagaagatat tatttcataa aaattcgccc caaaagggag
     4141 aagtatctcc cttttgtatt ttttataaca aattaaccgt ttctctcaac atttccacat
     4201 cgtgttcaat atatcctagt gtcacactga tatctttatg ccctaacagt ttctgaacca
     4261 cataaacatt ttcgggcttc ttcattaatt gagtagcaac tgtatgtcga aatctgtgtg
     4321 gtgatgaagt aaaaccgacc aagtcagaaa tatgccgaaa tatatgtgta agctgatttt
     4381 ggctcatcgg ctgtcctctt cttcgagagc atcgagaaaa taaattgaga ttgaacaatt
     4441 ggcaattatc tgtttgtttt cttattttta attcagtaat aagcctttct atatgaatat
     4501 aaagtgaatc tgaaatcggt acgatatggt aatcatgatt tttattgatt tccggcgaaa
     4561 tataaatcgt cctattagaa agatctacat cactaatttt cagtttcact aattgtcctc
     4621 gccgaatccc cgtacatctc aatgtcataa taattgcaag gacaaaccag cttggtttta
     4681 gaaagtcagg taatacaacg ttattattga gtatgtggtc tattttatgt aattgttcgg
     4741 ttgaataagt tttctttctc cttttcgatt ctcgaataaa taactgatta aatggatttc
     4801 gatttatatt aagtaatcct tgcgatatac caaagttata taaggctttt aaatgtctga
     4861 cataattatt ccacgttact gctttgattt tatcgccaac aatttgatta cgccattcaa
     4921 tgagcatatc ggtggtaatg tcattggcat ttaactttgg ataacgcttt ttgataattc
     4981 ggattacgtt gttgtagctc cgtttggtat ccggacgaag atagtgacga tagaaaaaaa
     5041 aatcggtcta gtagcgaatc aaaagagata gaagttatca ttttaagttt cctctttctg
     5101 taaagttaaa cagtgattat ttaatagtac cttatcccca aaaaagagac gggtattttt
     5161 tatcaaatat cctgttaaag aggaagtctt tctcggtcca atgacatcac atttccaaaa
     5221 attgatggta tccggcttac cgttggtcat tgtgttttta ggtgaatgaa tccctaatcc
     5281 ttgaaaatca tactggagat tattaattgt ttccttatca taaggctgtc cagtctcttg
     5341 caaatacatt tcaaaaataa cgggggtaac taaaaacagg tggtcttcaa caatatggag
     5401 cttggcagta ggcttgttaa ttgcaaattt gttggtcgca atacctgatt tgagccactt
     5461 tacaaagtta tctcctgtaa ttgagttctc cttattctgt aactgtagct ctgatagtgt
     5521 taatgtttcg ggcgtttcta ctgcactttg tgttactttg agctttttag tggtagattt
     5581 atcctgtact tcttgtttgg atggcatact tgcaatttcc tgtcccttac caattgaaat
     5641 atcatcaagg cttggttcgg aactttccgt aggtgcaaac atatccagca caaaggaggt
     5701 taaatcattt tcatcattta tgatgatttc tgaggatggt gcattatccg agtttgtctc
     5761 tacctgagat atttcaactt ctttagaggc aataatgccc cctgtctgaa cactcggtaa
     5821 tggagctggt ttagtggtcc catcgactaa tgtagactga gtctctatat tactttcttc
     5881 tgttatctgc tcgactattt taacttttcc ggcaaaataa tttggtcgat cattaatatt
     5941 ctcccaagcc acttctggtt taattctcaa taatgtaaag gtatttgctg gcgtccaacc
     6001 tgaatcagct tgaatacggc aactccaaat tgctccacca gccggtgatt cttctacaat
     6061 accgagagac tgcatttcat caaataactt tggattatcc ttaggcactg aaattccctg
     6121 ccccagtaag taagctcgga tattatcagc agcagttttg ctaacaagcc acaatccttc
     6181 ctcagtgaac caaccgtctg ccggaccttt gggtgtattt aactttattt tctgttccag
     6241 caaataacgt agtgccaaga ccagttgctt tgacagagaa ttgacaggac gttgaaccag
     6301 tttatttaca tcgccaccga gtgcgagggt aacactatgc tgatcggctt tctgcacgat
     6361 ctcagataaa agcccggctt tatcgttatg cccagacatt gcatacatca gtgaagaaat
     6421 gacttctgga tactgtccca gccaatcaaa cgcagatttt ggaataagtt gatttgcaag
     6481 gaagcctcct agcaccggat gaagatggta gtctcgacct ttgatgtatt tgaatttata
     6541 aggttgaggt ggtaacccat tccaagcaaa ccaacgtgaa ccgtctttga gtgtaatttc
     6601 aatatcaacg acaactttgc caatatcgtg aactaaggca agataaattg cagcggcagt
     6661 ccaagcgtct cgttgcttag attgttcttc aggtgcgaca ttcggtggca atatatagtt
     6721 ttgacggact ttggctgaaa aagcaataac ttccaaaccg tgatcgagca ttccgccgat
     6781 atgtgaatga tgatgtgact cggaagcggg taacagttgc accatttcgg cataacgctc
     6841 tattggctgt tgataaagtg cctcaaacat ttgacggttc attgatacct gttgccaaag
     6901 tagacccaga tatttttggc gtaattccgt attaagtagt tgggaggcat ttttcggata
     6961 taaccagccc tcactatcct gctcaataga gaaaacattg tcagatttaa ccgaactttg
     7021 agacgaggat ttacttttgc caagaatttt tttgagaatt gagtgcattg aaatagaccg
     7081 aaaaagatga tgtttgcgtt gaaagaaagc cgtttagccc tttgcccttt tgggtaagac
     7141 ctttcccctt ggaaaggtta cccttattcc cccttagggg attacccttg cccgtaaggg
     7201 ctcctttatc cttttgccat tgagcggctt ttatctgaac caaatttaat ttataaaggg
     7261 agagtattga accaaaaaat aagagaactc agtaggaaaa actctctgaa tatgttggag
     7321 gatttttgac taatgctgtt gagttgagat attacaatat actgatgata gtaatcttat
     7381 atttgccacc agtacaaaag aaatacggca caaaatgtgc cgtattttga aagttagcta
     7441 ttttttagct gtttaaggcg ttcatcttgc ttttttagaa tatggcttgt ccatatggcc
     7501 aacccaaatg caataaaagc aataatccaa atgccgatca ttaatcccat tttgatttct
     7561 ccttctcaat aaattggcgt atatttctac cgataactaa acagaaatag gtagctataa
     7621 atagaccaat tatactgctt atcttaatcc aaaactcgta attactatac agcatagcag
     7681 gtactgcaac aaaagctact ttaccaacat catcacagaa ttttgaccaa gattcaagtg
     7741 tcgaaatttc aatgggtcgt ttaaataagt ttagattgag cattgagtcc tctcgttaag
     7801 tgaataaaaa gggagacaca atgccccgaa gggagagtat ctccccacgg gaaatgcctt
     7861 tcggcaaatt tattaagcgg cttcttcaaa tacttcgtat ttatcagcca gctgtgcgat
     7921 gtttaaggca tccagcatat attgacaggc ttcccgagct ttccctgaag ccctgaaaat
     7981 tgcccgttta tcctctctta acaccttgat ccaactttca atgtagctgg cattttgtgg
     8041 cacgtcagca aagcctaggt gagaacacaa gaatgcacag cccatttcag cgaccaattc
     8101 ttcaaaagca taaactttat tgccaaagcg agcttttccg gaaacaatac catcacgagc
     8161 aaggcgagat tgatgccctg ttgcgtgagt catttcatgt agcagcacgc tatggaattt
     8221 ttgtggtgaa tgaaactgct tcatttccgg catcacgata tggtcattgc gtgggtggta
     8281 gtaagcttga ttgcttggtt ttaccatcac ttgcaaatcc atacctttca acatcaaacg
     8341 aatctcctca aaaatagcat actgattttc gtcagtcagc tgttctgggg tttcaaccgt
     8401 ttcataccag tcctgtggca gtttttcgca ctgttcaata ttgaataggc agtgcttttt
     8461 aatcgaagcg agatgttcga ttaccgggtt accatcgtca tcgaggacaa ggttgccatc
     8521 atcatcggtt ttttctcgat catacgggcg atagctgacc gcaagggttg ctttttcacc
     8581 tttccgaacg tgtccaccgg cttcaatagc tgcttttgca gtgatccact tgcgttggat
     8641 atagccgtgt tctgcggcag acaaccaaag taacaaaaca ttgattccgg aatacaatct
     8701 tccggatatg gcattacacg gcataccacc ataaggaata acgctatccc aaggtttaag
     8761 ccaaggagcc gttccttgct ctaaagcggc gatgatttta tcggtcactt cttgatataa
     8821 atcaaattta ggctgtgtgt ttgattgagg gttcataagt gtttctccaa agttcgggta
     8881 gaaaaatggg gaaacactat cgccctatgg ggaagtcgtt tccccgatgg gtagtttata
     8941 aaatttcaac agcgacaatt ttccttgtgt tatcaaaacc gattgaactg cctatagcgt
     9001 agtaattacg aatagtctgt tcatcggcat tgattagggt aaagaaataa tcgccatcat
     9061 cgtaaataac tttaacagtg cgaggttcca ttatctcacc tccattaaag caaacgttga
     9121 aaacaatttg cagctctgaa gttgtaactt ttctcggctg cttcagtttc agtaatcatt
     9181 ccctgttcca gcaaaatacg agctatgccc tcataaaaca ggtgcagaaa aatggaaata
     9241 aaacctgttg tttcaacttt ggttggacgg caatagtatt gcttgtcata ccaaattttg
     9301 atgtcatctt tgagcttttg agattccaca actcgatata caacgtctga cacgttgatt
     9361 aagttaccgt gaaaattaag ccaaatcgta taacgattcc aatctccttt tttcatcggc
     9421 tcaatgcaga tgtgaaacag atattgatag actttatttt caaggttgcg gttatcccaa
     9481 atatatttaa gttgctctaa attgtgttca tttttcataa catttctcca aattaaaaag
     9541 tggagaaaca ttttgcccaa tagggaaaat atttccccac ggggtgaaaa ttaaccacta
     9601 caagcggtca aattaaagta aaaatctgca aattaggcgt gcaagtaggc aaaacgtgct
     9661 gcattatggc gagcagaggc aatcgcctca ccaataagct cttgtcgata accactaaac
     9721 gaacggtcat tcggcgagta acttattcca ctcaagcgag caagacctaa ctgaatttca
     9781 cttttcttat cggtaacagt tgcttcaaaa tcagcataac agagttgccc ttgacaaatc
     9841 tgctctatag ctgcttcaaa atcacacata tcaccaaatg cccaatcaac aagctctgaa
     9901 taaaactcag aaggtttacg tttcagttct actagatatt tttccgtatt aaatttgaaa
     9961 acggtttccg tttgatacgg cgaggcttca ataatttgat aaccgaccga ttccatttca
    10021 cgggaaatat ctttgatgta ctgctccaaa tcttcgataa atccgtccca caatgctttg
    10081 tatttatcca cttttgaagt aggaaaatac cagtttcttc gagcatcact atcattgaaa
    10141 aacactaact gatctgcagt tttagcataa agctccatcg tattccaatg cgagtaacga
    10201 tacccaaagc gatttcgtat aatttcaaaa ccaatatcat cgtgggtttc ccaagattca
    10261 atgtgcgtta gcaaattagc aaacattttc tgtttacgtt tctgtggatt gagatgattg
    10321 aaaagctgga ttagatcatc tgtaccaagc cgaccataaa atgcgactcc atctccttga
    10381 caatggctga gtgaatactc catatctaag gtatccggaa aaccagcttt gacaagagcg
    10441 tgtttaaaat aagtgtttaa tactgaatct gacataatgt ttctccaaaa taaaaaataa
    10501 tgggaaacac ttaagcccaa ttcgggaaag tatttcccga tagggtaaaa ggaaggtaaa
    10561 acggagaaca agctcctcgg ggaacttgtt cccctatggg ttagaatgga gttttgctat
    10621 ttagactgtg gcttatctga ttttgtaaac aaaatatctc gatttgccca agttactaga
    10681 acaataaaaa ttgttgccaa taacgctgtt ccaatagcag cacctaaaaa gtacggactc
    10741 atttcggttc tccttgcttt gaattaagta ttttctcaga atgatgtagt gcgatatgcc
    10801 cgataatcca aatatacaat ccccacaaaa aaagaacaaa tccttccgat gtggaaatct
    10861 gatcattgga aattaccatt ccgacaaaac cagctcccat aagataacca gcttttctaa
    10921 aatcttctcc gattttagct agtactttgg gattcatttt gtaaaaaagc ttaccaaaca
    10981 ttgaaccaac tatgaacgac tgacaatgag cttgccgtct tgctccgata cactcagaaa
    11041 gcggaaatgc agtccttgtc gggctggcat ttgttgcata aatcgcacgc tttgagtgcc
    11101 tttatctcga ttttgccagg cttcgagagc tttatggcta atttcgtgat gtaaggctcg
    11161 atgttccggt gtccattcat tgagtttgat tggcaaaata tctccaacac aggagagttt
    11221 gatatgaact gacatacatt tctccaaaat taaggggaaa tgtattacca caagggaaat
    11281 agcatttccc cgatgggtga gttaaattag attaaagaga gctgagtacc aaaaacggta
    11341 gccataccac ataaaaaggc aataatcgca acgaataaag ccctgaaaaa catcttacgc
    11401 ttaatgcgag aaatttcctg ctcatattca gctgcttgct catctaagca catttgcaat
    11461 tctaaggctc gcatttcatc ttcttcagca attcgttgat tgatgccttt ggttacctcg
    11521 acatatttgc ttttagcttt atgtttcgcc gaaacgaaaa tattaccgag cttattgcca
    11581 agtttccaaa aaagagaagg ttttgcggtt tttgacgatt caaatgggat cacatcccat
    11641 cctgcggttt gttgactcat agcgagttct cctataaaaa gttaaataaa taaaattcct
    11701 caggagatcg caattccaag ggaattgaaa tatccctcgg aaggtaggtg tttaggtggc
    11761 attcctgcaa atttgcagcg ttccctttca gaatgctggg agacattttg ggtaaataac
    11821 tcaactacct cgatggatag ccgccgcttc tcaagagtta tgcgactttt aagggctgtt
    11881 tccacagcat cttaatattc catatcatac gaaatccatt tataaaatca accatttttt
    11941 gctcaaaaaa atatctcttt tttgaaaaga gtttttccta tcctctatgt aaaaatctcg
    12001 ctaattttct gcttatttat tcggaaagag agtgatgaaa gcaagtagat ttctaggata
    12061 tttcagcata gtaacagtag tgttttctgt agtggcacaa gcacagccga atatcattgt
    12121 ctatacaaca aagatgtacc ccattcaaaa ttcacaactt gcctcccaag tttattatct
    12181 tgatcaagta gagaattttg aagaggaaat cagtcgaaat ctcagtaaat cccccgagat
    12241 tgccgaacga gaaatacgag cattctttaa ttcagcagat tggaaagccc aagaagagca
    12301 attaaaagat gcttatcaag gggtgatcag tggatggcaa aatggaatta aaaaagtgcc
    12361 tgcggtgttt tttaataatc tgcaatcctc tccgagcgtg atttatggta tgactgatat
    12421 acaaaaagca ctagatgaat ggcataaatg ggttcaacaa cacggtgaat caaaatgaaa
    12481 agagcgtttt tttcggtact tctctctgta agtttagcag taccaacaac cttatatcct
    12541 caacaggtaa aagcatcatt gaatacggcg tcgattgctg catcaagtgc ctcaacaagc
    12601 tgtttagact ataaagtcgt cggaacgtgc ttctggttat tttgcaccta ctttggatgc
    12661 aaggttcgta catcaaccaa aattaagcat tatttaccgg aaatggtcgt ttcatcttat
    12721 aaccaggatg ggcaaactcc gtggacagaa ttacaatctc tcaatcctgg cgtaaaaggc
    12781 ggagaatatc gttctccgca acgtcaatac tctcaactaa ccttcaaaaa tgcagatgct
    12841 ttcgggcatc cccaaggagc aattggtcag ttattaggaa gtacaggcta ctattgtaaa
    12901 agtcaaacca caccatttat accctatttt ctaagtggat tagatttctt tgcttggcgt
    12961 gaaaatatgc cggaaatgtt ttatccggaa gctctgattc cgggaatgcg ggaagttggc
    13021 cgtgtaggcg atagctgggg aaatatttac ccacgttccg gttgggtaac acaagctcac
    13081 gattataaag cctctgcaac cattgtgcag agagttgcag acatcgtgac ccgaactgct
    13141 caaccacata tttatttccc ggcagcgaaa aaaggtggtg ttggagaatg gccaccagga
    13201 cctgtcgaag aaggacaagc cagaacacat aaatggcaaa tgctttatcc tcaaatgtca
    13261 aatacctgct ctgtttttcc aaatgggggg caaacagaca cctattcctc tcagatttca
    13321 aatcaaggtg attatgcttg ggcactatgg cgaccttata gttgttgtaa acgccgaggg
    13381 caaacattcc tttacagtat tgattggtca cactaaaacg aggtcttgca atgaaatcac
    13441 aatttaaatt caagaaaaca catctattag taataacagt acttttttcc agtacttcct
    13501 ctatctcttt tgctgactca atcactgata aactggaatt tagtaagtcg gattcgatta
    13561 tttcagatcg tgtcttttac caaatcggcg gaggaacagg ttatatggct ccacctagtc
    13621 gtggtaatac caaagtcgtt gatttaggca tcggttggaa agcgaattta acctgtggca
    13681 attttgacat taaaacaact attaaaaatg atttaaacgg ccttaaagat ggctttaaag
    13741 atttaatggg gaatgtcatt gattcagcta aaggtgcggt tgccagtatg cctgcaatga
    13801 tattgcaacg ggccaaccct caactctacg atttgctgac aaatggtatg taccaaggta
    13861 agctggattt caaccgtcta aaaacttcct gtgaggaaat gtctaaagtt ctggcagatc
    13921 acacactagg aggaaaatgg gggcaagcag cagatttaga gagctataag caaattacct
    13981 cgacacaacc tgatgcgaag caagcccaaa aagacctaga agataaaaaa gggaaagatg
    14041 ggagagtttg ggttggtggg caacgtaaag gtgggcaaaa ccaagatcca attaatgtcg
    14101 ttggtgatgt agcgaaaggc ggatttaatt tactcaataa gcggaatgtc ttagatagca
    14161 gcccggtttc aaattgtgaa ggtaatcttt gtcagacttg ggatacacct caagctgctg
    14221 ccgacttctt aactaagatt attggtgagc aatcaatttc aacctgtaag gaggattgtg
    14281 gtactaaaac cagttcgaaa gccggtgttg gtttaagtcc ggaaattgaa gaagaacata
    14341 ttcgtacaat tgttaaatta gaaaatgtac tgaatatgga tgtgccgaaa tccgagctat
    14401 tagctgaatt aagctcaagt agtgtacctg tcactcgtgg cttgattgaa agcctccgtg
    14461 atgatccaga tgttgaactt ctcagccaac gtttatccgc tgaaattgcg accagtaaag
    14521 taatggaaaa aatgctactg gctcgccgag caatcctagc tggtatgcga gagccgaatg
    14581 ttgctcaaaa tgcggatgct caagtagaac tggaaagagt actcaatatt attgaccgtg
    14641 aaatttccca agtaaaactg gaaatggata tgcaaaaaat gatcaccggc aatacggctt
    14701 cggtgattct gcaaagtaaa tccgaacggg aagctcttgc tggtgctcat agtttatccc
    14761 aagatagtct ggataagcgt gttcaaggac ttgaaaacgg taatgttgca ttaactgatt
    14821 tagagacagg ctctaatatt aacctctctc gtagaaatat tgcattgagt atcccaaata
    14881 ttccgaatgt agcagctctc atcccgactc taccaaatag aggtggttca ggtgtaggcg
    14941 gaaatttccc atcacttgca caaatcagcg gttcaacgat ggatcaggca acagggttac
    15001 tgcgtaattt tgaaggcttt atctccaagg ctcaatggga tgtgaatgcc catcgtgtag
    15061 gatatggttc cgatacgatt acacgggcag acggtaccgt agttaaagtg accaaggata
    15121 ctgtgattac caaagaagat gctgaacgtg atttagctcg cagaactgct atctttgcga
    15181 acaatgtgag acaagagtta ggtgattcac attggaatgc attaccggcg aacgctcagg
    15241 ctgttttggt gtcttatgca tataattacg gctcactagc gaaaacaaaa agtgtgcttg
    15301 acgcagctag acgatcagct caaactggtg atatgactgc tttggcaact gctgtcagaa
    15361 atcgccaggt tgataataac ggtatcaatg cacgccgccg gaatcaggaa gctgattata
    15421 ttcttggtaa aaattaacct tataaggagt tacatttatg cgtaaattat tagtaattac
    15481 tgctcttaca ctctgcacga ccccagtatt tgcagcagat aaaaacgtaa tattttcctg
    15541 taccagcacg gagggaaaac cgcttactgt taaacgggta ggaaatgatt acgaatattc
    15601 gtatgacaaa acaaccttca aaaatccgat taaaaaggca gtcactaatg acggctcaat
    15661 tatcgccaga ggttcaggtt ttacaacgta tgcattagag ctggaaaatg atggattgaa
    15721 gtatttggtc ggctttgttc agccaaatgg caatgcaaaa gaatttattg agccgggagc
    15781 aacgattagc caaagtaaag aacaaccaag tatcggctct gttgattgtg atactcgtaa
    15841 aaaaagccat tataagtttg atgttcattt gatgaatact ttataatgcc tgtatggcac
    15901 tagggccagc ccacgttaaa aaacacaaag atcggtaggt aaatccctta ggtttgaaaa
    15961 tctaagggat ttttttattg tcatgcttga tttgtacggt ataaatacgt acaattaaaa
    16021 ctaaataatt caaggagaaa atatatggca actgcaaccg cacgatttga agctagaatg
    16081 agccaagaag ttcatatgct gttaaaacga gccgcttctc ttgaagggcg tagtcttagt
    16141 gattttgttg ttggagctgc actatctgca gcaagaaaaa cagttgagca aaatgatatt
    16201 attcgattat ctgtgaatga ccaagaactt tttgctaaag cattgattga tcctcctgaa
    16261 cctaatttgg caatgcaaaa agccttggca ttaagctcac agattctggg ggaataatgc
    16321 tttcgggatt gaaaatagag tcatttagca aggaatttaa acgagattgt tttgatagtg
    16381 aatctgaatt attaaatcaa tatctcaaaa ctcaggtttc acaagatatt aaaagacgta
    16441 ttacttcttg ttttttagct gttaattctg aacagacagt agtaggatat tacacactgg
    16501 cttcaacaag tctttcatta tctgatttac caattacatt acagaggaaa ttaccaagat
    16561 atcctacggt acctgccgtc ctacttggtc gattagcagt agataagcgt gtaaagggat
    16621 tagggttagg gcaagctcta ttaggtaatg cacttaaaag ggtacttcgt gcagatatag
    16681 cagcttacgc attaattgtt gaggcaaaag atgaaagtgc ggtcaatttt tatcgtaaat
    16741 ttggatttat tgactttgaa aatgaggcta ggaaattatt ttttccacta gatagggtga
    16801 gattatctta atggagagtg attatgaaaa ataattttgg ttattggtta ggcaggaaaa
    16861 ttcgagcttt taaagaatgg aatcatccca cttttctcaa atatacatat attatattat
    16921 ttctcctaat aacttatcag ctaaggctat ggttatatgc tgtattcgga gcagttatat
    16981 ccttaattgg tattgttctg ttagctgatt ttatgcatga gaataacgca ataacacaaa
    17041 gacgtaatat actt
//
LOCUS       DANLTI010000047        16882 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.047, whole genome shotgun sequence.
ACCESSION   DANLTI010000047 DANLTI010000000
VERSION     DANLTI010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16882
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.047"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..455)
                     /locus_tag="PXB09_001216"
     CDS             complement(<1..455)
                     /locus_tag="PXB09_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5233344.1"
                     /translation="MPFYAGQVKCIFIDPPYNTKSAFTHYDDNLEHSIWLSMMYPRLE
                     ILRELLAEDGSIWITLDDNESHYLKIMLDEIFGRKNFISNLIWEKKRKPSFLGKVGKV
                     TDNLFCYAKNKNELNELNDLTYLETSGDETYPLYNAGNSREILVFPPRS"
     gene            complement(494..739)
                     /locus_tag="PXB09_001217"
     CDS             complement(494..739)
                     /locus_tag="PXB09_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase N-4/N-6"
                     /protein_id="HDL5233345.1"
                     /translation="MTTLTWYGKEEAVKKAKQTPYCLLRELPDFSHNIARQPTADSRQ
                     PTADSRQPTADSRQPTADSRQPTAQLLLKPYLKSSKI"
     gene            complement(880..3366)
                     /gene="torA"
                     /locus_tag="PXB09_001218"
     CDS             complement(880..3366)
                     /gene="torA"
                     /locus_tag="PXB09_001218"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5233346.1"
                     /translation="MKKQDNIDVSRRGFLKNSSLSLAAGAGLASGTTGVVGALASTSA
                     KAAEMKTVVTAAHWGPLGVVVENGKVVKSDSVFEISVPNELQHVVADQVHGETRVKYP
                     MVRKGYLEGNKDTTLRGRDEWVRVSWDKAFELVANEMKRVREAHGANAIFGGSYGWYS
                     SGALHASRTLLQRYLNVTGGFVGVKGDYSTGAAQVIMPHVLGTIEVYEQQTSWEVILE
                     SSDIVVLWSANPLNTLRIAWTSTDQQGIEYFKKLKESGKRIICIDPVKSESCEFLGAE
                     WVPVNTGTDVALMLGMAHTLVAEGKHDQAFLKKYTTGFEKFEEYLLGKTDNQPKDAKW
                     ASQICGVPEETIKKLATDFQSKRTMLMAGWGIQRQRHGEQGHWMLVTLAAMLGQIGLP
                     GGGFGLSYHYSNGGVPSATGGILGSITANPAVEAGAKTWLDETSKSSFPVARISDALL
                     NPGKTIDYNGTQITYPDIKIVYWAGGNPFTHHQDTNTLVKAWQKPDTIIVNECHWTPT
                     ARMSDIVLPATTSYERNDLTMSGDYSMMNIFPMKQVVEPQFEAKNDYDIFAELAKRAG
                     KEAEFTEGKSEMDWLQSFYQTAFEAARKNRVIMPKFEKFWQENKPLSFKASDKAKKWV
                     RYEEFRNDPLLNPLGTPSGKIEIFSEVIAKMNYDDCKGHPTWMEHEEYSGKTTAEEPL
                     ALVTPHSKWRLHSQLAYSSLRKQYAVNDREPVLIHTEDAAARGITSGDIVRIFNKRGQ
                     VLAGAVVTDGIIKGTLALHEGAWYDPLDLGTSEQPLCKNGNPNVLTRDEGTSKLAQGN
                     SPNTATVQVEKFTGQAPEVTVFKEPKYTQG"
     regulatory      complement(3385..3581)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            complement(3585..4700)
                     /locus_tag="PXB09_001219"
     CDS             complement(3585..4700)
                     /locus_tag="PXB09_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5233347.1"
                     /translation="MAKMKKIAVFVGIMALGAAVLGGTQYAMKATSSTEFCVSCHSMT
                     HPQAEWEGSVHFSNRKGIRAECSDCHLPQDGLHYVKAKIIALKDVWHTVVTNKLPDQE
                     AYEAHRLEMAQRVWAEMKENDSMTCKSCHSFDAMVLSEQTEAAQKMHKLAQETNQTCI
                     DCHKGIAHFMPDVPVDNAAAMGELAKHGAEFSTNDKTLYTLAMTPVQLAQGGEIRLLP
                     YAELHQWTAEGEQVKATVNGWQQEGAESVVYMDLGKRIMVALLPDDAQSKVNVTKTVF
                     DNVTNSNWKEINFEITAPKNAVTANITALNHFGDNLNQTHCSGCHAPIGAEHYTANQW
                     IGVVNSMKDRTSMSADDVRAVTIYLQRNAKDVAGSSH"
     gene            complement(4842..6593)
                     /locus_tag="PXB09_001220"
     CDS             complement(4842..6593)
                     /locus_tag="PXB09_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233348.1"
                     /translation="MDKRSRWSCLVNEQGEISEWEDKAGADYFAELPQICHYAQALLY
                     SDKNSLQFYYSSNHQWLKISLERHQSFVLTQAEHTDLPYGLSKREIELLTLISSGLSN
                     EDIANELCISKRTVDKHIENIFAKTHTKSRTLLAVFAITEHLICLPTPGKLTQSILAS
                     FNIEQLALQIIAKKQPLVTASTRHEPPIFTINHHHSRPIIIGVPYVEQGIGQIDTREL
                     LNGTQLAVETINQQGGIHGREVQVATAGFYVKDKASILQAYHHLFDQEVDAISTAYAC
                     YLPEVHELIATKGIPYLHIATHSGSNKLAQNLPNQRIENMFQVCASDVTYGLGISHFL
                     QYYRYHYAPWLQNKTVMVVTVSWQKVDIGIESLTLSLREQGWNVDYLELTQEQDNYAT
                     LMAQVHNLAPSIIVFASYFAEDIVQFYQTFIRNPTNAIIYSIYAPSAFLPHEKLCEGV
                     LWSTNSGLSENYLGRQFSQHYERFFGKSPTYSQASIAYDQANILANAWKQSVSPRHFK
                     AVSNAIRLQPHYGVNGTYYFNTDSQIGLTYAETHDLSISLPQLVYQIQQGQSRVIAPE
                     LFANAQFILPPWFSEKA"
     regulatory      6757..6913
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            6902..7927
                     /gene="moaA"
                     /locus_tag="PXB09_001221"
     CDS             6902..7927
                     /gene="moaA"
                     /locus_tag="PXB09_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDL5233349.1"
                     /translation="MQSIIPIKNVGDDVVSGLVDRFQRQYTYLRLSITDVCNFRCNYC
                     LPDGYKPPSHKQTFLSVDEIQRVAKAFANLGTEKIRITGGEPTLRKDFLEIAHTISQT
                     PGIRKVALTTNGYRLERDVELWQQAGITDINVSVDSLDPRQFQLITGENKLQSILKGI
                     DKAFEIGYPKIKVNAVLMKQYTAPELDKFLTWIKDKPIQMRFIELMETGEMDSFFQAQ
                     HLSGQSVMTRLLQEGWQLQPKAMSDGPAKVLSHPDFKGEIGLIMPYEKNFCASCNRLR
                     VSALGKLHLCLFGEEGIDIRDLLASDEQQLQLETRLKSSLQGKREHHYLHIGDSGVRN
                     NLASIGG"
     gene            8428..8904
                     /gene="moaC"
                     /locus_tag="PXB09_001222"
     CDS             8428..8904
                     /gene="moaC"
                     /locus_tag="PXB09_001222"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDL5233350.1"
                     /translation="MTTFTHINQNGEANMVDVSMKQETVRIARAEAFVRMNAETLQMI
                     VSGNHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPESNQVRIESL
                     CKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIENVRLLSKSGGKSGDFKVD"
     gene            8897..9142
                     /gene="moaD"
                     /locus_tag="PXB09_001223"
     CDS             8897..9142
                     /gene="moaD"
                     /locus_tag="PXB09_001223"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDL5233351.1"
                     /translation="MIKILFFAQVRELVATDRLDVEPTFTTAEALREHLSQQGKKWQL
                     ALEKGKLLVAINQTICPLETEIKDGDEVAFFPPVTGG"
     gene            9144..9599
                     /gene="moaE"
                     /locus_tag="PXB09_001224"
     CDS             9144..9599
                     /gene="moaE"
                     /locus_tag="PXB09_001224"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDL5233352.1"
                     /translation="MFETLIEVQEAEFDQNRIYQWLSEQHSVGAATLFIGKVREMNLG
                     DNVSGLFLEHYPAMTKKALQEIVAQARTRWDLQRVAVIHRIGQLHTGDEIVLVGVSSA
                     HRGDAYHANEFIMDYLKTKAPFWKREQTQAGERWIEGRESDQQAAKKWQ"
     gene            9632..10114
                     /gene="ybeY"
                     /locus_tag="PXB09_001225"
     CDS             9632..10114
                     /gene="ybeY"
                     /locus_tag="PXB09_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDL5233353.1"
                     /translation="MENLYIDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES
                     EITIRIVDEAESHELNLTYRGKDKPTNVLSFPFEAPEGIEMPLLGDLVICRQVMEKEA
                     EEQGISAESHWAHLAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPYLSEKI
                     "
     gene            10192..12210
                     /locus_tag="PXB09_001226"
     CDS             10192..12210
                     /locus_tag="PXB09_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HDL5233354.1"
                     /translation="MRTIAIITSPNNADFIQQGYFYIPENHQLKAIPFSNAKTILGQE
                     YPFAIYTMQAENGVNFNLDAFAILAGTIQENGTLFLLCPQWDNLENELDFDALRWNEN
                     QAIACPNFYQHFKQLVAKFGFEVRTNLPKLPATSGQIPSKIYQLTQEQQNILQNLPLD
                     PADIHLITAPRGRGKSTLAGRLAKALPAQNKVLITARSYSALPSFWRSAEQKIPFFAP
                     DNLIEQVKSKNISPNQWLFIDEAASLPLPILHTLCAYFEKVVLTTTTQNYEGTGRGFE
                     LKFPVMLDKPFKHWTLSQPLRWSENDPLEAFVTELLLLSEEKSPLFSKEGKGEIYSLR
                     SHYVPLLKQRSNAKRLWQKQLSKNISYSNKHLQEKIAFYHLLANAHYKTTPTDLRRLF
                     DGENQLLFSQQENEQLIGGIWAMQEGGLDEKLTQAIWLGERRPQGSLVAQYLCFQGNL
                     PQACKLHSIRISRIAVLPEKQNQGVGKRLISQFILQNSVEKRPLDFISVSFGLTTPLH
                     AFWQSCGFQLVQITPNKEASSGYQSAMMIYPISEQGKLFAQQATQAFARDFALQPFFT
                     EICEELQNFEQFRPLATHNLDERDWKNLTAFAHGKRTFSAAYVSLKRLYLSDKARFSE
                     LDIFERKGQKISKMEVENYRKLVLQNLNNKSFKIIYRFYYIFLCFCSC"
     gene            12275..13465
                     /locus_tag="PXB09_001227"
     CDS             12275..13465
                     /locus_tag="PXB09_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDL5233355.1"
                     /translation="MFSHIQAAPADSILGLGEAFKADSREGKINLGIGVYMTDEGKTP
                     IVKAVKEAEKRLLETENSKNYLTIDGVQAFNAATQALLFGEGAEVITSGRAKTAQSLG
                     GTGALRIAAEFIKRHTNAKNVWISTPTWPNHNGIFDAVGVNVKGYRYYNKETNGLDWE
                     NLIADLSQAEAGDVVLLHGCCHNPTGIDPTPAQWEQLAALSAEKGWLPLFDFAYQGFA
                     NGLEEDAYGLRAFVKNNRELLVASSFSKNFGLYNERVGAFTLIADNADDANRAFTQIK
                     SIIRVLYSNPSAHGASAVAVALADPDLKAQWIAELDEMRNRIKEMRSQLVQKLKEKGA
                     NKDFSFITEQNGMFSFSGLTPEQVDKLKDEFAIYAVRSGRINVAGITSKNIDALADAI
                     VKVL"
     gene            complement(13572..14873)
                     /gene="folC"
                     /locus_tag="PXB09_001228"
     CDS             complement(13572..14873)
                     /gene="folC"
                     /locus_tag="PXB09_001228"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDL5233356.1"
                     /translation="MNTLSIPKATDSLETWLSYLEQAHSKPIDMGLDRIRKVATELDL
                     LKPAPYVITVAGTNGKGSTCRLLEVTLLKAGFRVGVYSSPHLIHYNERVRINGEVLPD
                     ADHVQAFAKINAKKTASLTYFEFSTLSAFELFKQNQLDIVILEVGLGGRLDATNIIDP
                     SLAVIISIDIDHVAFLGDNREDIGREKAGIFRENIPVVIGEPDCPHSIKQIADSLNCH
                     AFYRGKDWQFEIKNNLFHWYSEEKSFTDLPIPLIPIPNAGTALAVLMQLPFEIDEKII
                     RQALNEAQMTGRFQTLTDTDFTHFSQPKPAAKVIIDVGHNPHAARYLADKLRELKQPN
                     QKIYAVFSALEDKDLSGIVEPLANIIDEWHCAGLDCWRGQTGEAVLAKLVNVLPNSTA
                     CSYENVAQASRVLFETANENDIVLVFGSFHTVADFMLWLET"
     gene            complement(14883..15779)
                     /gene="accD"
                     /locus_tag="PXB09_001229"
     CDS             complement(14883..15779)
                     /gene="accD"
                     /locus_tag="PXB09_001229"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDL5233357.1"
                     /translation="MSWLDRILGRDSSSSSNAKSKVPEGVWTKCTSCEQVLYSEELQR
                     NQQVCPKCDHHMRIDARTRLLNLLDKDSAVEIAADLEPEDVLKFKDLKKYKDRLTAAQ
                     KQTGEKDSFIVLAGTLHNMPVVTASFNFEFMGGSMGSVVGAKFVKAAEKALAEKIPFI
                     CFSASGGARMQEALFSLMQMAKTSAILAKMKEQGVPFISVLTDPTLGGVSASLAMLGD
                     VNIAEPKALIGFAGPRVIEQTVREKLPEGFQRAEFLLEHGAVDMIVHRKEMRDTLSRL
                     CAKLTNQPTPFKVAELVVENAE"
     gene            16088..16870
                     /gene="mazG"
                     /locus_tag="PXB09_001230"
                     /pseudo
     CDS             16088..16870
                     /gene="mazG"
                     /locus_tag="PXB09_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991517.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
BASE COUNT         4930 a         3531 c         3503 g         4918 t
ORIGIN      
        1 atagaacgag gagggaaaac taaaatttct cttgaatttc cagcattgta taatggatag
       61 gtttcatcac ctgaggtctc aaggtaagtt aagtcattta attcatttaa ttcatttttg
      121 ttttttgcat agcaaaataa attatctgta actttaccaa ctttgcctaa aaaagatggt
      181 ttccttttct tttcccaaat taagttagaa atgaaattct tccgcccaaa aatttcatca
      241 agcataattt tcaaatagtg actttcgtta tcatcaagag tgatccaaat tgaaccatct
      301 tcggcaagta actctcgcag aatttcaagg cgtggataca tcattgaaag ccaaatggaa
      361 tgctctaaat tatcatcgta gtgggtaaag gccgattttg tgttataggg aggatcaata
      421 aaaatacatt tgacttgccc cgcataaaag ggcaaaagag attttaaggc tgataaatta
      481 tcaccctgaa taattaaatt ttgcttgact ttagataagg tttcagcaga agctgagctg
      541 tcggctgtcg gctgtcggct gtcggctgtc ggctgtcggc tgtcggctgt cggctgtcgg
      601 ctgtcggctg tcggctgtcg gctgtcggct gtcgggcaat attatgcgag aagtccggca
      661 actcacgcaa taggcaatat ggggtttgtt ttgctttttt gacggcttct tctttgccgt
      721 accaagtaag ggttgtcata aaatgcacct gaaaagtaaa agtggattat tgtaacaagc
      781 ggtcaaaaaa atagaaagtt ttacaaaaaa ttaagcaaat ttaaccgctt gcaacataga
      841 aaaggcacag ttttatactg tgcctttggt tatatgaaat tagccttgtg tgtatttagg
      901 ctctttaaat actgttactt ctggtgcttg tccggtgaat ttttcaacct gtaccgtagc
      961 ggtatttggt gagttaccct gtgctaattt tgatgtgcct tcatcacggg ttagcacgtt
     1021 agggttgccg tttttacata gcggttgctc gctggtgccg agatcgagcg gatcgtacca
     1081 agctccttcg tgcaaggcta atgtaccttt gataatgcca tctgtcacca ccgcaccggc
     1141 taatacttga ccacgtttgt taaaaatacg tacaatatca ccgcttgtaa tgccacgagc
     1201 ggcggcatct tcagtatgga tcaacaccgg ctcacggtca ttaaccgcat attgtttgcg
     1261 taatgatgag taagctaact ggctgtgtaa acgccattta gagtgtggag tcaccaatgc
     1321 caacggttct tctgcggtgg ttttacccga gtattcttcg tgttccatcc aagttgggtg
     1381 acctttacag tcatcataat tcattttggc aatcacctca gagaaaatct caattttgcc
     1441 ggacggtgtg cctaatggat ttaggagtgg gtcattacga aattcttcat aacgaaccca
     1501 ttttttcgct ttgtctgatg ctttaaaaga aagtggttta ttctcttgcc agaatttctc
     1561 gaatttcggc ataatcacac gatttttgcg tgctgcctca aatgcagttt gatagaaact
     1621 ttgtagccaa tccatttcag atttgccttc ggtaaattcc gcttctttgc ctgcacgttt
     1681 ggctagttcg gcaaaaatat cgtagtcgtt ttttgcctca aattgcggtt cgaccacctg
     1741 tttcatcggg aaaatattca tcattgaata atcgcccgac atagttaagt cattacgctc
     1801 atagctggtg gttgccggca gcacgatgtc agacatacga gccgttggtg tccaatggca
     1861 ttcattgacg ataatagtat ccggtttttg ccacgctttc accaaagtgt tggtgtcttg
     1921 gtggtgggta aacggattac cccctgccca atagacaatt ttgatatcag gataagtaat
     1981 ttgtgtgcca ttgtaatcaa tggttttgcc cgggttgagc agtgcatcgg aaatacgagc
     2041 caccgggaat gaagattttg atgtttcatc taaccaggtt ttcgctccgg cttctactgc
     2101 cggatttgct gtgatagagc ctaaaatgcc ccctgtggca ctcggcacgc cgccgtttga
     2161 gtaatggtag cttaaaccga aaccaccacc cggtaagccg atttgaccta acattgcagc
     2221 tagggtgact aacatccaat gcccttgttc accgtgtcgt tggcgttgaa tcccccagcc
     2281 tgccattaac attgtgcgtt tagattggaa atcagtcgct aattttttaa tggtttcttc
     2341 cggcacacca caaatttgac ttgcccattt tgcatctttc ggttgattgt ctgttttacc
     2401 gagcagatat tcttcaaact tctcaaaacc ggtggtgtat tttttaagga atgcttgatc
     2461 gtgtttgcct tcagcgacta aggtatgagc cataccgagc attaacgcaa catcagtgcc
     2521 ggtgtttacc ggtacccatt ctgcacctaa aaattcgcaa gattcacttt ttaccgggtc
     2581 aatacagata atgcgtttcc cgctctcttt gagttttttg aagtattcaa taccttgttg
     2641 atcggtagaa gtccacgcaa tgcgtagcgt atttaacggg ttagctgacc aaagcaccac
     2701 aatatctgaa ctttctaaaa tcacttccca actagtttgc tgttcgtaca cctcgattgt
     2761 acccaagacg tgtggcataa tcacttgagc agcaccggta gaatagtcgc cttttacacc
     2821 aacaaatccg ccggtaacat ttaaatagcg ttgtaacagt gtacgggaag cgtgtaatgc
     2881 cccagaacta taccaaccgt aagaaccacc aaaaatagca ttcgccccgt gagcctcacg
     2941 aacacgtttc atttcattcg caactaattc aaatgcctta tcccacgaaa ctcgcaccca
     3001 ttcatcacgc ccacgtagag tagtatcttt attaccttct aagtagcctt tacgcaccat
     3061 tgggtatttt actcgtgttt caccgtgtac ttggtctgct accacgtgtt gcaattcatt
     3121 tggcacagaa atctcaaaaa cagaatcaga tttcaccact ttgccatttt ctaccactac
     3181 acctaaaggc ccccagtggg cggcagttac tactgttttc atctcggctg ctttggcact
     3241 ggtggaagct aatgccccca ctacaccggt agtaccactg gctaaacctg caccggcagc
     3301 taagcttaat gatgaatttt ttagaaaacc gcgacgactt acgtcaatat tgtcttgttt
     3361 tttcataata aacctcgttt gaagttaagt taaaaataga cacctttcta aagtcgagtg
     3421 gataaaccat ttctcgtgta tccattggta aaagcaccga cggtaatttt tgcaaaatgt
     3481 taggaaaaaa tgaccgcttg tagtaggtgc tttacggctt gctaccatat ctctgctctc
     3541 agcagacact taggctcaca agctcggtat cctctaagtt gcaattaatg ggaactgcct
     3601 gctacatctt ttgcattacg ttggagatag atagtcaccg cacgcacatc atcagccgac
     3661 atagatgttc tgtctttcat tgaatttacc accccaatcc attgatttgc ggtgtaatgt
     3721 tctgccccaa tcggtgcatg gcaaccgcta cagtgtgttt ggtttaagtt atcgccaaaa
     3781 tgatttagtg cagtaatatt ggcagtgact gcatttttag gagcagtaat ttcaaaattg
     3841 atttctttcc aatttgagtt ggtgacatta tcaaacactg tttttgtgac attcactttg
     3901 ctttgagcgt catcaggtag aagagcaacc ataatacgct tgcctaaatc catatacacc
     3961 acagattccg caccttcttg ttgccagcca ttaaccgttg ctttaacctg ctcgccttct
     4021 gctgtccatt gatgtaattc tgcataaggt aacaagcgaa tttctccacc ttgagcgagc
     4081 tgcactggag tcattgcgag cgtataaagg gttttatcat ttgtgctaaa ttccgcaccg
     4141 tgtttagcta attcgcccat tgctgcggca ttatctaccg gcacatcagg cataaaatgg
     4201 gcaattcctt tatggcaatc aatacaggtt tgattagttt cttgggctag tttgtgcatt
     4261 ttctgtgccg cttctgtttg ttcagaaagt accatcgcat caaaactatg acagctttta
     4321 caggtcatag aatcgttttc tttcatttct gcccaaacac gttgtgccat ttctagacga
     4381 tgggcttcat aggcttcttg atcaggtaat ttattggtta caacggtgtg ccaaacatct
     4441 tttaatgcga tgattttagc tttgacataa tgcaagccgt cttgtggtag atggcaatcc
     4501 gaacactcgg ctcgaattcc cttacggttg gaaaaatgga cactgccttc ccactctgcc
     4561 tgtgggtgag tcatagaatg gcagctcaca caaaattctg ttgagctggt ggctttcatt
     4621 gcatattgtg tgccacctaa taccgcagca cctaatgcca taataccgac aaatacagca
     4681 atttttttca tcttagccat aaattacccc acttaataca ctaaaaatta aagacagagg
     4741 cattgtatta actcccaaga ggtataaaaa taagtaaaaa tacctattac ctcgaaagag
     4801 tgagaataat ttgatctaag gcaaaaatat gtagtgaaat tttaggcttt ttcagagaac
     4861 cacggcggta agataaattg tgcattggca aacaactccg gtgcaatcac acggctctgc
     4921 ccttgttgga tttggtaaac caactgtggc aagctgatag ataagtcgtg ggtttctgcg
     4981 taagttaatc caatttggct atcggtatta aaatagtaag tgccgtttac cccataatgt
     5041 ggctgtaagc ggatcgcatt ggagacggct ttaaaatgcc gtggtgaaac actctgtttc
     5101 cacgcatttg ccagaatatt cgcttggtca taagcaatac tggcttggga ataagtgggc
     5161 gatttgccga aaaaccgttc gtaatgttgg ctaaactgtc tgcctaaata attttcgctt
     5221 aacccactat tggtactcca aagaacgcct tcgcaaagtt tctcgtgtgg caaaaacgcc
     5281 gaaggtgcat aaatactgta aataatggca tttgttgggt tgcgaatgaa cgtttgataa
     5341 aactgtacaa tatcttctgc aaaataagag gcaaacacaa taatggaagg tgcgagatta
     5401 tgcacctgtg ccattaatgt ggcataatta tcttgctctt gggtgagttc cagataatcc
     5461 acattccagc cttgctcccg caaacttagg gttaaacttt caataccgat atcaactttt
     5521 tgccaactca ccgttaccac catcaccgtt ttattctgaa gccaaggggc ataatggtaa
     5581 cggtaatatt gcagaaagtg agatatacct aagccatagg ttacatcact ggcgcaaacc
     5641 tgaaacatat tttcaattcg ttgattcggt aaattttggg caagtttatt tgagccacta
     5701 tgggttgcaa tatgcaaata aggaatgcct ttagttgcaa ttaattcgtg tacttccggc
     5761 aagtagcagg cataagcggt ggaaatcgca tcaacttctt gatcaaataa atgatggtat
     5821 gcctgaagaa tacttgcttt atctttaaca taaaacccag ccgttgcaac ctgtacttct
     5881 ctgccgtgaa taccaccttg ttgattgatg gtctcaaccg caagttgagt gccgttaagt
     5941 agctctcggg tatcgatttg cccaataccc tgttcaacat aaggcacgcc aataataatc
     6001 ggacgactat gatggtggtt tatcgtaaaa atcggtggtt cgtgtcgagt tgaagccgtt
     6061 acaagcggtt gttttttcgc gataatttgc aatgccagtt gttcaatgtt aaagctggca
     6121 agaatggatt gggttagttt tcccggtgtg ggtaaacaga ttaaatgttc ggtaatggca
     6181 aaaacagcta ataaggttcg gcttttggta tgtgttttcg caaaaatatt ttcgatatgt
     6241 ttatcaacag tccgtttgct gatacaaagc tcattggcga tatcctcatt gctcaaacca
     6301 ctgctaatta gagtgagaag ctcaatctcc cttttactca gtccataagg caaatcggta
     6361 tgctctgctt gagtcaatac aaacgattgg tggcgttcta ggctgatctt aagccattga
     6421 tggtttgaac tatagtaaaa ctgcaagcta tttttatctg aatagagcaa tgcctgtgca
     6481 tagtggcaaa tttgcggtaa ttcagcaaaa tagtctgccc ctgctttgtc ttcccattct
     6541 gatatttcgc cttgttcatt tactaaacaa gaccatcggc tacgtttatc cattctcacc
     6601 tcgaactaaa aacgttagct aaaatagcaa aattatctcg gcattaatat gatataaatc
     6661 aaactaagca acggttgcca gatttttata ggtagagcat acaatttaaa ttatacctct
     6721 tgcctaatta ggtttctcac cataaaatga aaaccaattt attgaagact ccgagcatta
     6781 tttcctaact ctaaaaatta aagacaaatt tttgatatgg aatttatgcc agtaacagca
     6841 taaagctgtt caaaggataa cttagaaatg ggttgtcctc tcgtgtttag aaaggtgtca
     6901 aatgcagtct attatcccaa ttaaaaacgt gggtgatgat gtcgtttcag gtttagttga
     6961 tcgctttcag cgtcaatata cttatttgcg actatccatt actgatgttt gtaacttccg
     7021 ttgtaattat tgcttgcctg atggctataa gccgccttca cataagcaaa cttttcttag
     7081 cgttgatgaa atccagcggg tggctaaagc ctttgccaat ttagggacgg aaaaaatccg
     7141 tatcaccggt ggtgagccaa ctttacgcaa agatttcctc gaaatcgctc acactatttc
     7201 acaaacaccc ggtatccgta aagttgccct aaccaccaac ggctatcgcc tagagcgtga
     7261 tgttgaactg tggcaacaag ccggtattac cgatattaat gtgagtgttg atagccttga
     7321 cccacgccaa tttcaactga ttaccggcga gaacaagttg caatctattt taaagggtat
     7381 tgataaagcc tttgaaattg gctacccaaa aattaaagtc aatgcggtgc taatgaagca
     7441 atataccgcc cctgaattgg ataaattcct cacttggatc aaagacaagc cgattcaaat
     7501 gcggtttatt gagctgatgg aaaccggtga aatggatagt ttcttccaag ctcaacatct
     7561 ttctggtcaa tcggtgatga cccgcttatt acaagaaggc tggcaattac aacccaaagc
     7621 gatgtctgac ggcccggcaa aagtgctttc tcaccctgat tttaaaggcg aaatcggctt
     7681 aattatgccc tacgagaaaa atttctgtgc ctcttgcaac cgcttgcgtg tttccgcact
     7741 tggtaaactg catctttgct tatttggtga agaagggatt gatattcgtg atttactggc
     7801 aagcgatgag caacagttac agcttgaaac ccgcctaaaa tcttccttac aaggcaagcg
     7861 agaacaccac tatttgcata ttggggatag tggggttagg aataatttgg cgagtatcgg
     7921 tggttaaaca accaccgagc gtgttttttc tgttactttt ctttgcttcg ccaaagaaaa
     7981 gtaaccaaaa gaaaggcgac cccagatttt ccttaatcct tcgcttgttg ctaacttttg
     8041 ggacgaactt ttcaaactcg ccaactgcgt tggctcaaac acgaaaagtt gtcctcaaaa
     8101 gtttacgcaa tcgctacggc ggaaaatagg ggcaagcggt acattattta agatttttgc
     8161 aagtttttat ttaaaaataa ccgcttgtaa tgttccagct tctcccttct gaaccgcctg
     8221 agcgactttg aatttatagg aaaaatttag tgtttgagcc aacgaagttg gcgagtttta
     8281 aatttttccg ttaaacaaat tcaaataaaa tgaagatagc ggtgaagtag ggtgtgcttt
     8341 ctttggttac tttctttgca caagcaaaga aagtaacaag aagacgctca atattaattt
     8401 tacaatcaaa tttaaagaga caaacaaatg acaaccttca cccacatcaa ccaaaacggc
     8461 gaagccaata tggttgatgt ttcaatgaaa caagaaaccg tacgcattgc ccgagcggag
     8521 gcatttgtgc gaatgaatgc cgaaacatta caaatgatcg tcagtggtaa tcaccacaaa
     8581 ggcgatgtat tcgcaaccgc tcgaattgcc ggtattcagg cggcgaagag aacttgggag
     8641 ctgattccac tctgccaccc gttattgctt tctaaagtgg aagttcaact ggaggcgttg
     8701 ccggaaagca accaagtgcg aattgaatca ctctgtaaac taaccggcaa aaccggcgtg
     8761 gaaatggagg cattaaccgc agctagtgtt gctgctctga ctatttacga tatgtgtaaa
     8821 gccgtgcaaa aagatatgat tattgaaaat gtaagattac ttagtaaaag tggcggaaaa
     8881 tcaggagatt tcaaggttga ttaagatact ttttttcgcc caagtgcgtg aacttgtggc
     8941 aacggataga ctagatgttg agcctacttt taccactgcc gaagcgttgc gtgaacactt
     9001 aagccaacag ggtaaaaaat ggcaacttgc ccttgaaaaa ggcaaactgc tggttgcaat
     9061 taatcaaacg atctgcccgc ttgaaacgga gatcaaagac ggcgatgaag tggcattctt
     9121 cccaccggta accgggggct aaaatgtttg aaaccctgat tgaagtacaa gaagctgaat
     9181 ttgaccaaaa ccgcatttac caatggctca gtgaacaaca tagcgtgggg gcagccactc
     9241 tattcatcgg taaagtacgt gaaatgaatt tgggcgataa tgtttccggt ttgtttcttg
     9301 aacactatcc ggcaatgact aaaaaagcat tgcaagaaat tgtggctcaa gctcgcactc
     9361 gttgggattt acaacgcgtt gcggtgattc accgcattgg gcaactgcat accggtgatg
     9421 aaatcgtatt agtcggtgtg agttctgctc atcgaggtga tgcctaccac gccaacgagt
     9481 ttattatgga ttatctcaaa accaaagccc cattttggaa acgagaacaa acccaagccg
     9541 gtgaacgttg gattgaaggg cgtgagagtg accaacaagc cgccaaaaaa tggcaataga
     9601 aaaaatggca ataatttgca aaaggtaacg aatggaaaat ttatatattg atttgcagat
     9661 cgcctgcgaa aataccgaaa acttaccaag tgaacaacaa ttttatactt gggtacaaaa
     9721 agccctcgca gttgaggcaa aaaccgatga tttccctgag agtgagatca ccattcggat
     9781 tgtcgatgaa gcagaaagcc acgagctaaa tctgacttat cgtggtaaag acaagccaac
     9841 caatgtgcta tctttcccgt ttgaggcccc cgaaggaatc gaaatgccac tattgggtga
     9901 tttagtcatc tgtcgtcaag taatggaaaa agaggcggaa gaacaaggta tttcagccga
     9961 atcccattgg gctcatttgg cgattcacgg cacacttcat ctgctcggct acgaccatat
    10021 tgaggaagat gaagcagtgg aaatggaaag cctcgaaacc gaaattatgc aaagtttagg
    10081 gtatgaagat ccgtatcttt cagaaaaaat atagtcttgt aggggagggt cctgtgccct
    10141 ccagtactcc attataatcg gacaggcaca ggagctgttc ctacaagtta tatgagaacg
    10201 atcgcaatca taacatctcc taacaatgcc gactttattc aacaaggcta tttttacatt
    10261 cccgaaaatc atcagcttaa agctatcccc ttttccaatg ccaaaacgat tttaggacaa
    10321 gaataccctt ttgccattta tactatgcaa gcagaaaatg gggtgaattt taacttagat
    10381 gcttttgcaa tacttgccgg cactattcaa gaaaacggta ctttattttt gctttgtcct
    10441 cagtgggata atttggaaaa tgaattagat ttcgatgcgt tacgttggaa cgaaaatcag
    10501 gctattgcct gcccgaattt ctatcaacat tttaaacaat tagtcgctaa atttggtttt
    10561 gaagtcagaa ctaatttgcc aaaattaccg gctacaagcg gtcaaattcc ttcaaaaatt
    10621 taccaattaa cgcaagaaca gcaaaatatt ttgcaaaatc taccgcttga tcctgccgat
    10681 attcatttga ttaccgcccc tcgtgggcgg ggcaaatcta cccttgcagg gcgacttgca
    10741 aaagcgttac ccgcacaaaa taaggtatta attaccgcac ggtcttattc tgcattgccc
    10801 agtttttggc gttcggcaga gcaaaaaatc ccttttttcg cacctgacaa tttaatcgag
    10861 caagttaaaa gtaaaaacat ttcacctaac caatggctct ttattgatga ggcagctagc
    10921 ctacccttgc cgatactcca cacactttgt gcctattttg aaaaagtggt tttaaccaca
    10981 acaacccaaa attacgaagg cacggggcga ggatttgagc tgaaattccc ggtaatgttg
    11041 gataaaccgt ttaaacattg gacgttatct caaccattgc ggtggagcga aaatgatcct
    11101 ctcgaagcat ttgtgactga gttgctatta ctttccgaag aaaaatctcc cctctttagc
    11161 aaagagggga agggggagat ttattcgctt cgctcacact atgtgccgtt gctaaagcaa
    11221 cgttcaaacg caaagcgttt gtggcagaag caattatcga agaatataag ttattcgaat
    11281 aagcatttac aggaaaaaat cgctttctac cacttactcg ccaacgccca ttacaaaacc
    11341 actccaactg acttacgccg tttatttgat ggcgaaaatc agcttttgtt ttcacaacag
    11401 gaaaacgagc aacttatcgg cggaatttgg gcaatgcaag agggtggttt agatgaaaaa
    11461 ttaacccaag ccatttggct aggggaacgc cgtccgcaag gcagtctagt ggctcaatat
    11521 ctctgttttc aagggaattt accgcaggct tgcaaattgc attccattcg catttctcgg
    11581 attgcggtat tgcctgaaaa gcaaaatcaa ggcgttggca agcggttgat ttctcagttt
    11641 attttgcaaa attcggtaga aaaacgaccg cttgatttta tctctgtgag ctttgggcta
    11701 actactccac tccacgcatt ttggcaatct tgtggtttcc aacttgtgca aatcacaccg
    11761 aataaagagg caagcagtgg ttatcaaagt gcaatgatga tttacccgat ttcggagcaa
    11821 ggaaagttat ttgcacagca ggcaacccaa gcctttgcca gagatttcgc ccttcagcca
    11881 tttttcacgg aaatttgtga ggaattgcaa aatttcgaac aatttcgacc gcttgccaca
    11941 cacaatttag atgaacgtga ttggaaaaat ttaaccgcgt ttgctcatgg caagcggacg
    12001 ttttcagcgg cgtatgtgag tttaaaacgg ctttatttat cggataaagc acgcttttca
    12061 gagctggata tttttgaacg aaaagggcaa aaaatctcca aaatggaggt ggaaaattat
    12121 cgaaaactcg ttttgcaaaa cttaaacaat aaatcattta aaataattta taggttttat
    12181 tacatttttt tgtgtttttg ctcttgctaa atctgcaatt taatcgtata aattcactgt
    12241 ttatttttca ttttgatgag gaactccaat gtcaatgttt agtcacattc aagctgctcc
    12301 ggcagactca attttaggct taggtgaagc gtttaaagca gatagccgtg aaggtaaaat
    12361 caaccttggt atcggtgttt atatgaccga tgaaggcaaa accccgattg tcaaagcggt
    12421 aaaagaagca gaaaaacgtt tattagagac ggaaaacagt aaaaattatt taaccattga
    12481 cggtgttcaa gcattcaatg cggcaacgca agcgttatta tttggcgaag gggctgaagt
    12541 gattacctca ggtcgtgcta aaactgcaca gagtttaggt gggacagggg cattacgcat
    12601 tgcggcggaa tttatcaaac gtcatacgaa tgcgaaaaat gtatggattt caaccccgac
    12661 ttggccaaac cataacggca tttttgatgc agtaggcgtg aatgtaaaag gctatcgcta
    12721 ctacaataaa gagactaacg gtttagattg ggaaaattta attgccgatt taagccaagc
    12781 ggaagccgga gatgtggtgt tattgcacgg ttgctgccac aacccgaccg gaattgaccc
    12841 aacacctgca caatgggaac agttagcagc attatctgcc gaaaaaggct ggttgccgtt
    12901 atttgacttt gcttatcaag gctttgcaaa cggtttagag gaagatgctt acggtttacg
    12961 agcttttgtg aaaaataacc gtgaattgtt ggtcgcaagc tcattctcga aaaactttgg
    13021 gttatataac gagcgtgtcg gtgcatttac cctaattgca gataatgctg atgatgccaa
    13081 ccgtgctttc actcaaatca aatcgattat tcgtgtactt tactctaacc catctgctca
    13141 cggtgcaagt gcagtagcag ttgcattggc tgatcctgac cttaaagcac aatggattgc
    13201 ggaattagat gaaatgcgta accgtattaa agaaatgcgt agccaattag tgcagaaatt
    13261 aaaagaaaaa ggggcaaaca aagacttctc tttcattact gagcaaaatg gtatgttctc
    13321 attcagtggc ttaacaccgg agcaagtgga taagttaaaa gatgagtttg caatttatgc
    13381 tgtgcgttca ggcagaatca atgtagcagg cattaccagc aaaaacattg atgctcttgc
    13441 cgatgcgatt gtgaaagtgc tttaattaaa ccttaaagat atatagaggc ataagcctga
    13501 gtgcttgtgc ctctttttta tcttttaggt acaagtgtgg acacttgcac caacgttgat
    13561 tattcgtaga actaggtttc caaccaaagc ataaaatctg ctaccgtatg aaatgagccg
    13621 aacaccagca caatatcatt ttcgttggct gtttcaaaca atactcggct tgcctgtgcc
    13681 acattttcat agctacaagc ggttgaattt ggcaaaacgt ttaccaattt cgctaacacc
    13741 gcctcgcctg tttgtccacg ccaacaatct agccctgcac aatgccattc atcaataata
    13801 ttagctaatg gctcgacaat accggataaa tccttatctt ctaacgcact aaacaccgca
    13861 tagatttttt gatttggttg ctttaactcc cgcagtttgt cagctaaata acgtgctgcg
    13921 tgtgggttat gccctacatc aataattact tttgcagccg gtttaggttg agaaaaatga
    13981 gtaaaatcgg tatccgtcag ggtttgaaaa cgccctgtca tttgagcttc atttaaggct
    14041 tgtcgaataa tcttttcatc aatttcaaat ggcagttgca ttaatactgc taatgcggtg
    14101 ccggcgtttg gaatcggaat aagcgggatt ggtaaatcgg taaaggattt ttcttcagaa
    14161 taccaatgaa acagattatt cttaatttca aactgccagt ctttaccccg gtaaaaagcg
    14221 tgacaattta acgaatcagc aatctgttta atcgaatgag ggcaatcagg ctcgccgatg
    14281 acaaccggaa tattttcacg gaaaatgccg gctttctcac gcccgatgtc ttcacggtta
    14341 tcgcctaaaa atgcaacgtg gtcgatatca atcgagataa tcacggcaag gcttggatca
    14401 ataatattag tggcatctaa tcgcccacct aatccgactt ctaaaatcac aatatcgagc
    14461 tgattttgtt tgaatagctc aaatgcagac agcgtactaa actcaaaata agtgagtgaa
    14521 gcggtctttt ttgcattaat ttttgcaaat gcttggacgt ggtcggcatc aggtaatact
    14581 tcgccgttaa ttcgcacccg ttcattatag tgaattaagt gcggtgaaga gtaaacacca
    14641 acccgaaatc cggcttttaa taaggtaact tctaacaaac ggcaggtcga acccttgccg
    14701 ttagtaccgg caacggtaat cacataaggg gcaggcttga gtaaatccag ctctgttgcg
    14761 accttacgaa tacgatctaa gcccatatca atcggtttag aatgggcttg ttctaaatag
    14821 gaaagccacg tttccaaaga atccgtggct ttaggtatgc ttaatgtatt cattcagata
    14881 ttttattctg cgttttctac aaccaattcc gccactttaa acggcgttgg ttgattggtt
    14941 aattttgcac aaagacggga aagggtatca cgcatctctt tacgatgcac gatcatatca
    15001 actgccccgt gttctaataa gaactcggca cgttggaaac cttccggcag tttttcacgt
    15061 acggtttgct caattacacg aggaccagca aagccgatta gggcttttgg ctcagcaata
    15121 ttcacatcgc ccagcattgc caaacttgcg gaaaccccac ctaaagttgg gtcggttaat
    15181 acagaaataa acggtacgcc ctgctctttc attttggcta aaatcgcact ggtttttgcc
    15241 atttgcatta aagagaataa cgcctcttgc atacgagccc cgcccgatgc cgaaaaacag
    15301 ataaacggaa ttttttcagc taaagctttt tccgcagctt tcacaaattt tgcacctact
    15361 acagacccca ttgaaccgcc cataaactca aagttaaagg aggccgtaac caccggcata
    15421 ttatgcaatg taccggcaag cacgataaaa gaatctttct caccggtttg tttttgcgcg
    15481 gcagttaaac gatctttata tttctttaaa tctttaaatt tcaacacatc ttccggctct
    15541 aagtcggcag cgatttcgac cgcagaatct ttatctaaca aattcaataa acgggtgcgg
    15601 gcatcaatac gcatatgatg atcgcatttt ggacaaacct gttggttgcg ttgtaattct
    15661 tcgctataga gaacttgttc acaacttgtg cattttgtcc atacaccttc cggcactttt
    15721 gattttgcat tgcttgatga tgaagagtct ctacctaaaa ttctgtctaa ccagctcatt
    15781 attattcctt ttggattgag ttgttgggtt cactaaatgg ttgctattaa agcataattt
    15841 atcggttttt gatatgtttt cttgacatat cagatcacta actatgtgta taagttcgat
    15901 aaaaaaacgc aatcagaaga atgattaaca tcaccacaat ttgaattaag cgttttttgg
    15961 ttaatttttc cgctgccatt gctctgctca tacttaataa atttccgcat tataagcgaa
    16021 aaagcacggg ctatgtagaa tttgcaaaat tttgatcaaa aataaccgct tgtaaaaagg
    16081 aaatactatg gcaaccattg aacaatttct tgaggttgta aaccaacttc gtcaccctga
    16141 acacggctgc ccgtgggatc tcaaacagaa ttttgacacg atgttcccca cttattggaa
    16201 gaaacctacg aagtagcgga agcgattcac acccaagatc gcactgcctt gcgtgaagag
    16261 ttaggcgatt tattactgca agtggtattt ttaagccaat tagcgaaaga ggaaggcagt
    16321 ttcacttttg atgatgtagt aacggatatt cacgataaac tgatttaccg ccaccctcac
    16381 gtttttggtg atgtgaaagc tactaacagc gaagaggcct tacaaagttg ggaagcacaa
    16441 aaagcgaatg atgcaaaaca ccgtagccaa gattctattt ttagatgatt taccttttgc
    16501 tttgcctgct cttacccgtg caaataagct acaaaaacgg tgtgcaaaag ttggattcga
    16561 ttgggataac cctcacgatg tgctggcaaa agtcgaagaa gaactcgatg aagtcaaagc
    16621 agaaatcgca caatatccgg ctcgctccat cgagcttgct gaagaattag gcgatctctt
    16681 gtttgcgatt gtaaatttat gccgccatta tcataccgat gccgaggaaa ttttacgcaa
    16741 tgcaaatcta aaatttgaac atcgctttcg aaaagttgaa aaatctgtga aaaaatcggg
    16801 aagaactgta aaagaatgta aattagaaga actagatgta atttggcaca aaataaaagt
    16861 ggtaaaataa aaagcaccaa tt
//
LOCUS       DANLTI010000048        16866 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.048, whole genome shotgun sequence.
ACCESSION   DANLTI010000048 DANLTI010000000
VERSION     DANLTI010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16866
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.048"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(11..1129)
                     /gene="malK"
                     /locus_tag="PXB09_001231"
     CDS             complement(11..1129)
                     /gene="malK"
                     /locus_tag="PXB09_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005552148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDL5233358.1"
                     /translation="MANVSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKST
                     LLRMIAGLEDITTGELYIGGKLMNEVEPSKRGIGMVFQSYALYPHLDVAENMSFGLKL
                     AGVSKAERDQRVNQVAEILQLAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEP
                     LSNLDAALRVQMRVEISKLHKKLNRTMIYVTHDQVEAMTLADKIVVLNAGGIAQVGKP
                     LELYHYPANRFVAGFIGSPKMNFLPVKVIAVEPERVKIELPDANHHNFWIPVSGEGVN
                     VGDNLSLGIRPEHLVPSDQTQVTLHGIVQVVELLGNETQIHLEIPEIKQPTLIYRQND
                     VVLVNEGDDLNIGILPERCHLFKEDGTACKRLFVEKGV"
     gene            1550..2740
                     /gene="malE"
                     /locus_tag="PXB09_001232"
     CDS             1550..2740
                     /gene="malE"
                     /locus_tag="PXB09_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDL5233359.1"
                     /translation="MKNKCVKFTLATLATLVLSGTVMAKMTEGKLVIWINGDKGYNGL
                     AEVGKKFEKDTGVQVLVEHPDRLEEKFAQVASTGDGPDIMFWAHDRFGGYAQSGLLAE
                     VNVSKEFKDKFVDFAWDAETYNGKIIGYPVAIEAISLIYNKDLVKEAPKSWEEIIELD
                     KKLKKEGKNAIMWNLSEPYFTWPIAASNGAYAFKFANGKYDPKDIGVNNEGAVKALQF
                     VVDMVKNKHISADMDYAVAEASFNKGQSALTINGPWSWGNIDKSGIKYGVTLLPTLNG
                     QASKPFVGVLSAGVNSSSPNKDLAKEFLENYLLTDDGLDAVNKDKPLGAVALKSYQEK
                     LAADPRIAATMANAKNGEIMPNIPQMSSFWYAEKSAINNAVTGRQSVKEALDDAHSRI
                     QKQQ"
     gene            2859..4397
                     /gene="malF"
                     /locus_tag="PXB09_001233"
     CDS             2859..4397
                     /gene="malF"
                     /locus_tag="PXB09_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDL5233360.1"
                     /translation="MLTQTQSKSTHWLKYLLAGLVLLLDFYLVVLMYSQGEYLFAILT
                     LIILTSGVYIFTNKNTYAWRYVYPGITGMAIFILFPLVATIAIAFTNYSGSNQLSFER
                     AVSVLTEQRYFAGDKYQFTLYPQADNKYQIALTNPTTEQTFVSEPISLATGTNVVVTE
                     QNRPTGEVAPLKVITQNRAALQSMKVVLPNNNELTMSSLRQFSEQKPRYQFDEENKIL
                     LNNETGKRYQANDETGFFQSIDENGHWQSETLEPGYTVTSGFNNFIKIFTDEGIQKPF
                     VQIFIWTVIFSLLTVVFTVILGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILI
                     FKGLFNQSFGEINMILNQLFGISPEWFNDPLLAKVMILIVNTWLGYPYMMILCMGLLK
                     AIPADLYEASAMDGASTWQNFSKITFPLLLKPLTPLMIASFAFNFNNFVLIQLLTNGR
                     PDMIGTTTPAGYTDLLVSYTYRIAFEGSGTQDFGLAAAIATIIFLLVGGLALLNIKAT
                     KMEL"
     gene            4450..5340
                     /gene="malG"
                     /locus_tag="PXB09_001234"
     CDS             4450..5340
                     /gene="malG"
                     /locus_tag="PXB09_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDL5233361.1"
                     /translation="MAIVQSKSVRYRVWATHFILICFLALIIFPLLMVIGISLRPGNL
                     AIGDIIPSQISWEHWQAALGFDVTHADGTVTPPPFPVLRWLWNSIKVATITSIGIVTL
                     STTCAYAFARMKFKGKKTILQGMLIFQMFPAVLSLVALYALFDRLGQYVPFLGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDGSLEEAASLDGATPWQAFRLILLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLIGGLTAGGVKG"
     gene            5415..7472
                     /locus_tag="PXB09_001235"
     CDS             5415..7472
                     /locus_tag="PXB09_001235"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDL5233362.1"
                     /translation="MKNALPYLCLFYTSSLFAQSWQHSHFSDFNDDLEKHFFQSQVQL
                     EKGSYPLRFKFGEQCYQPQQAIKLNQSVALVPCINEAPQLRLFRQGNYLAQIDLRSGT
                     PTPTISVEQQLQHNEAMFQSCPNWDKKPIEIDVSSTFAEGESVSDFYSGNTAIVKNGK
                     VTLMPNENASGLILLEKSNTENTATFDWKNATVYFVLTDRFYNGDPTNDHSYHRQKDG
                     MQEIGTFHGGDLKGLTEKLDYLQQLGVNVLWISSPLEQMHGWVGGGDKGDFPHYGYHG
                     YYHLDWTKLDANMGTEDDLSRFVQQAHQRGIRVLFDVVMNHTGYATLADMQEFNFGGF
                     YLTPDEISRTLGEKWTHWKPKSGQNWHSFNDFIRFNDNQAWQNWWGKEWVRADIADYD
                     SPKFDDLKMSLAALPDLKTESEQAVKLPEFFANKNTNAKTLPNAKVRDYLIGWLSDWV
                     RKYGIDGFRVDTAKHVEKSTWLVLKQSAQQALNEWQKANPNAGFNDRFWMTGEAWGHG
                     VFKSDYYQNGFDAMINFDFQDQAKQGLNCFAHIEPIYAEMNRKLSDFNVLSYLSSHDT
                     RLFFHSDSEQNIEKHKTAANLLLLSPGAVQIYYGDESGRTFGATGSDLIQGTRSDMNW
                     QELQQDPQKQALHQHWQKLTQFRQRHPAIGAGVHQLIKNDSYFAFKRVLNEDKVMVVW
                     AGN"
     gene            complement(7586..10312)
                     /gene="malT"
                     /locus_tag="PXB09_001236"
     CDS             complement(7586..10312)
                     /gene="malT"
                     /locus_tag="PXB09_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDL5233363.1"
                     /translation="MLIPSKLVCSFRLQNSIPRKRLIQELDKSCSYPVVLINAPAGYG
                     KTTLVSQWIENKKNIGWYALDEGDNNSDRFATYFSAALHSAINEEIDVLLEENRKANL
                     LALFNQLLIKAAAFSEHFYLAIDDYHIIENDEIHEALKYWIKHQPSNMTLILISRSIP
                     PLSIASLRVQEQLLEIDINQLMFDHQESTAFFQARLGSELNQQDVIALCNEVEGWPTA
                     LQLISLFAKNKSHTLQVPLQDIAKRLAKSNHFHINEYLADEVLNKVDEETRLFILRCS
                     VLHSMNESLVQAVTGEQNSRTKLESLEKQGLFLQQMANSKWQSSDDSWWKFHPLFASF
                     LNLCCQNELYAELPQLHQKAANAWLQLGYVTEALHHAMQLSDTGLLLNILSKHAWTVF
                     HQGELKLLEESLNCLDYAHLTEHTNLVLLKAWLVQSQHRHIEVGGILADFSRALTENK
                     IELSKTANAEFNVLRAQVAINSGDENTALQLASEALNDLSENAYYAHIVATSIIGEAH
                     HCHGNLAEALAMLQKAERMARQHHTYHNILWSQLQQSEILLAQGFSQAAYEMLDKASE
                     FVKENHLQKVPMYEFLLRSKGKILWEWYNLDKAESMAVAGMNALSKFEDKLQCLTLLT
                     KISLARGNLDNTARLLGEVEQLEHSHSYHHDWIANADQVRIFYWQMTNDVSAVRNWLI
                     QNPSPVSDKNHFTQVQWRNIARSRILLEEYHEAKAILDNLIETAEKFSLISDLNRALI
                     VRNRLYFLQGEKELAQQDLIQALKLTRQTNFISAFVIEGDVMAQQIRHLLQLNVLDEL
                     VLHKAQFILRNINQFYRQKFAHFDENFVNQLLKNPKVPELLKISPLTQREWQVLGLIY
                     SGYSNEQISDELQVAATTIKTHIRNLYQKIGVTNRNEAISYTKELLMLMGYH"
     gene            10476..12845
                     /gene="malP"
                     /locus_tag="PXB09_001237"
     CDS             10476..12845
                     /gene="malP"
                     /locus_tag="PXB09_001237"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDL5233364.1"
                     /translation="MTFNSIVEKYCRYFDVTDPKHFTLQQWYQVVAEGSLELIYSQPA
                     TKPTESRHVNYLSMEFLIGRLTGNNLMNLGYYEQIRDYLKQYQVELVDVLEQERDPAL
                     GNGGLGRLAACFLDSMATVGQNATGYGLHYQYGLFKQSFKEGMQKEAADTWARDSYPW
                     HRFNPSKTRHIGFGGKIKHIQADQYEWQPKLTIQGKAFDLPIVGYKNNIIQPLRLWQA
                     DSDQSFDFDAFNEGKFLSADKTIVNAAALTQVLYPNDNHQAGQKLRLMQQYFHCACSV
                     ADILDRHISEGYSLEDLAKRQVIQLNDTHPTLAIPELMRVLLDEHQFTWEQAWDICSN
                     TFAYTNHTLLPEALEQWDQRLFKQLLPRHYQIVEKINDIFHDKVQAEFGDDAKIWEKL
                     AVLFDYRVRMANLCVVTCFRVNGVAEIHSDLLVTDLFPEYHKLFPTKFCNVTNGITPR
                     RWIRQANPQLSDLLDRTLKQDWTHNLELLKGVEQYADDTGFREEYQRIKRNNKVVLAN
                     EIHKTLGLNVNPNAIFDVQIKRFHEYKRQHLNLLNIIATYQSLKANPNQDYTPRLFLF
                     SGKAAPGYYLAKNIIHAINNVADIINNDKQVNDRLQVAFLPDYRVSLAEKIIPAADVS
                     EQISMAGKEASGTGNMKLALNGALTLGTLDGANVEIADMVGEENVFIFGHTVESVREL
                     LAKGYQPKAYYNQDPILKNAVDFLATGKASNGDKEAFKLMLDSLLERDPFLVFADFDS
                     YRQAQEKIGVAYLDQETWLRSAILNTARLGAFSSDRSIKDYQQRIWLNR"
     gene            12927..15005
                     /gene="malQ"
                     /locus_tag="PXB09_001238"
     CDS             12927..15005
                     /gene="malQ"
                     /locus_tag="PXB09_001238"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5233365.1"
                     /translation="MKITAKQYYRAGIMPYFFDERGVKKTASEKIKHSLFKAFNGNTQ
                     ARETPIPTVNIFYQHQPCFLPFHLADKKHPLTGTWQLQLENSNQIISGKIKARGITLP
                     QDLPLGYHQLQLKTVDKTFNCTIIIAPERCYQPQAVIEQKRLWGTFLQLYTLKSAHNW
                     GIGDFGDLKDFIQQIAPYQADFIGLNPIHSLFPANPNSASPYSPSSRRWLNIAYIDIN
                     QLAEFQQSDEAQTWFHSAEIQQQLSELRTQDWLNYEQIIPLKLKGLRFAFAKFQQNMT
                     ACAAPAFIEFVQKGGESLQVQATFDALHQHLSAQFADQWGWDFWEKAYQDYHSAAVQQ
                     FRETHKTDIEFYLWLQFVADQQLAECDAICRQQNMRIGMYRDLAVGVSPNGAETWNDK
                     QLYCLNASVGAPPDVLGPQGQNWGLTPMNPHVLKQQAYRPFIELVRANMSHCGALRLD
                     HIMSLLRLWWIPKGDSAVNGAYIRYPVDDLIAILALESQRHQCLIIGEDLGTVPKEIV
                     SKLKNAGILSYKIFYFEFDEQGKSRDLQHYPYQAMTTLSTHDLPTINGYWRGYDFELG
                     EKFGVYPNSNILAILKQDRVNAKAKILQRLQEHNVEIAPEISEQLNSPVNTAFIHCLQ
                     TYVANVSSGLFGFQPEDWLGMTEPVNIPGTSTQYANWRRRLSVNLEEIFTDKDIQALL
                     KEVNLIRKNQ"
     gene            complement(15070..16731)
                     /locus_tag="PXB09_001239"
     CDS             complement(15070..16731)
                     /locus_tag="PXB09_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDL5233366.1"
                     /translation="MSEIALTVSLLSLVAVLGLWIGHIKIRGVGLGIGGVLFGGLFVS
                     HFMAQFDVKLDAHTLHFIQEFGLILFVYSIGIQVGPGFFASLKHSGLKLNGFAVLIVL
                     ISGILVILIHKFFNVPLPVILGIFSGAVTNTPSLGAGQQVLAELSAESVTEIMGMSYA
                     IAYPFGIIGILLSMWLIRILFRINIEAEAEAFNKQQNRSKDQLSTLNVRLTNPNIHGL
                     TLKQIPDFNLHEVAYSRLKRGNELSIPRVDTILQIGDILHLVGEESSLRKMQIILGEA
                     VDVSVSTKGTIYRSERAVVTNEKVFGKQIRQLMLKGKYDVVISRLNRAGVELVPTGDM
                     TLQFGDVLNLVGRQADIEMVMTIIGNAHSKLQQVQMLPIFIGIGLGVLLGSVPIYLPG
                     FPVALKLGLAGGPLVVALILARIGSFSKLYWFMPPSANLALREIGIVLFLAVVGLKSG
                     GRFLETLLSSEGVEWICYGAIITFVPLMIAGLIARMYNKVNYLTICGLLAGSMTDPPA
                     LAFANEIKEGNGAAALSYATVYPLVMFLRIMLPQVLAIMLWVSGG"
BASE COUNT         5178 a         3505 c         3228 g         4955 t
ORIGIN      
        1 actgaaattg ttatacccct ttttcaacaa acaaacgttt gcaagctgta ccgtcttcct
       61 taaataaatg gcagcgttcc ggcaatatac cgatattcag atcgtcgcct tcattaacta
      121 ataccacatc gttttgacga taaattaagg ttggttgttt gatttcaggg atttcaaggt
      181 ggatttgtgt ttcatttccg agcaattcca caacttgcac aataccgtgt aaggtcactt
      241 gggtttgatc cgaaggaact aaatgttccg ggcggatacc taaagataag ttatctccca
      301 cattcacccc ttcgccggaa accggaatcc aaaaattatg atgattcgca tcaggtaact
      361 caatttttac ccgttccggc tctaccgcaa tcacttttac cggtaaaaag ttcattttag
      421 gcgagccgat aaaccctgct acaaagcgat ttgccgggta atgataaagt tctaacggtt
      481 tacctacttg agcaataccg ccggcattta ataccacgat tttgtccgct aatgtcattg
      541 cttcaacttg atcgtgcgta acataaatca ttgtgcggtt tagtttttta tgtaatttgg
      601 aaatttctac ccgcatttgt acacgcaatg cggcatcaag gttggaaagt ggttcatcga
      661 gtaaaaatac ttccggttgg gaaaccagtg ttctaccaat agccacccgt tggcgttgtc
      721 cgccggaaag tgctttaggt tttcgatcta ataaatgggc aagctgtaag atttcggcaa
      781 cttggttaac tcgttgatcc cgctctgctt tacttacacc tgccagcttt aagccaaaag
      841 acatattttc ggcaacgtct aaatgtggat agagagcata ggattggaac accataccga
      901 taccacgttt tgaaggctct acttcattca tcagttttcc accgatatag agttctcctg
      961 tcgtaatatc ttccaaacct gctatcattc gtaatagcgt agatttgcca caacctgacg
     1021 gtccaacgaa aacaacgaat tctccttcgt taatttctaa attaatatcc ttagagatat
     1081 gaacatcacc atacgatttt cccacgttac gtaatgatac attcgccata actaaacctc
     1141 ttttctgctt ttgcttgttg gttttattta ggctgaatag tcgccttttt atctaaagaa
     1201 gaaatcatcc taaaatactt ttttttaggc tgaatagtcg cctttttatc taaagaagaa
     1261 atcatcctaa aatacttttt tttagggtta gagccatagc cataattatt taaaaaacgc
     1321 caattcagaa aaattaaata aattttgtga tcaacctctc atttttaatg cctatttttg
     1381 tgaagcagat cacaaaatga taaaaaatgt tacttagatc atacttttag cttggggggc
     1441 gtagagcaaa gggtgatctc aaatagattg tatagcccat aatttgccat aatttaataa
     1501 atgggttgtt tcatatccgt ttcttttatt taacttcaag gagtttttta tgaaaaacaa
     1561 atgtgtcaaa ttcaccttag ctactcttgc taccttagtt ctttcaggaa cagtaatggc
     1621 aaaaatgacg gaaggtaaac tcgttatctg gattaacggt gataaagggt acaatgggct
     1681 tgccgaagtc ggtaagaaat ttgaaaaaga taccggtgtt caagttttag ttgaacaccc
     1741 ggatagactt gaagaaaaat ttgcacaggt tgcctcaact ggtgacggtc cggatattat
     1801 gttctgggct cacgaccgct ttggtggtta tgcacaatcc ggtttattgg ctgaagtgaa
     1861 tgtaagcaaa gaatttaaag ataaatttgt cgattttgct tgggatgctg aaacttacaa
     1921 cggcaaaatt atcggttatc cggttgcgat tgaagcgatt tcattaattt ataataaaga
     1981 tttagtgaaa gaagcaccaa aatcttggga agaaattatt gagttagata aaaaactcaa
     2041 aaaagagggc aaaaatgcca ttatgtggaa cttatccgag ccctatttca cgtggccgat
     2101 tgcggcttca aacggagctt atgcattcaa atttgctaac ggcaaatacg atccaaaaga
     2161 tattggtgtg aacaatgaag gggcagtaaa agcactacaa tttgtagtcg atatggtgaa
     2221 aaataaacat attagtgcgg atatggacta tgccgttgcc gaagcctcct ttaataaagg
     2281 acaaagtgcc ttaaccatca atggtccttg gtcttggggc aatattgata aaagcggtat
     2341 taaatatggt gtaactttac tcccaacatt aaacggtcaa gcttctaaac cattcgtagg
     2401 ggtgttaagt gccggtgtaa acagctcaag cccaaataaa gatttagcca aagaattctt
     2461 agagaattat ttactcaccg acgacggttt agatgcagtc aataaagata aacctttagg
     2521 tgcggtggcg ttaaaatctt accaagagaa attagcggct gatcctcgta ttgctgcaac
     2581 gatggcaaat gcgaaaaacg gtgaaattat gccaaatatt ccgcaaatgt cttctttctg
     2641 gtatgccgaa aaatctgcta tcaataatgc agtgaccggt cgtcaatcgg tgaaagaagc
     2701 attagatgat gcacattcac gcattcaaaa acaacaataa ttcttcatca ttctgagtgg
     2761 gttattatga cccactctat ttttagattc accctaaata caataaaagt acagtaaaag
     2821 taccgtaaca aaatgcagta aaaattcgag gtgctgttat gctaactcaa actcaatcca
     2881 aatccactca ttggctcaaa tatctcttag ccggattagt cttgctcctt gacttctatc
     2941 ttgttgtctt aatgtactca caaggtgaat atctttttgc tattttaacg ctgattattc
     3001 taacttccgg tgtctatatt tttaccaata aaaataccta tgcttggcgg tatgtttacc
     3061 ctggcattac cggaatggca atttttattt tgtttccgct ggttgcgact attgcaattg
     3121 cgtttaccaa ctatagtggt tctaatcaat tatcctttga acgagcggta tccgtcttaa
     3181 ctgaacaacg ctattttgcc ggagataaat atcaattcac cctttatccg caagcagata
     3241 ataaatatca aattgcatta accaatccga cgacagagca aacttttgtg tcagagccga
     3301 tttcattggc taccggaacg aatgtggttg taaccgagca aaacagacca actggcgaag
     3361 tcgctcccct taaagtgatt acgcaaaatc gggccgcact tcaatcaatg aaagtggttt
     3421 taccgaataa taatgaactg acaatgagct cattacgtca attctccgag caaaaaccac
     3481 gctatcaatt tgatgaagaa aataaaatat tactcaataa tgagactggc aaacgttatc
     3541 aagcaaatga cgaaaccggt ttcttccaat cgattgatga aaacggtcat tggcaaagcg
     3601 aaacacttga accaggttat actgtcacat caggctttaa taacttcatt aaaattttta
     3661 ccgatgaagg tattcaaaaa ccttttgtcc aaatatttat ttggacggtg atcttctctt
     3721 tattaaccgt tgtctttacc gttattctcg gtatggttct tgcctgtttg gtacaatggg
     3781 aggcattaaa aggtaaagca gtctatcgtg tcttattgat tttaccttat gccgtaccat
     3841 catttatttc gattctgatt tttaaaggac tatttaacca aagttttggt gagatcaata
     3901 tgattttaaa ccaactattc ggcatcagcc ctgaatggtt taacgatccg ctccttgcca
     3961 aagtgatgat cttaattgtc aatacgtggt taggttatcc ttatatgatg attttatgta
     4021 tggggttact caaagctatt ccggctgatt tatatgaagc ctccgcaatg gacggtgctt
     4081 ccacttggca aaacttcagt aaaatcactt tcccattact gttaaaacca cttactccgt
     4141 taatgattgc ttcgtttgca tttaacttta ataactttgt attaattcaa ctattaacaa
     4201 acggtcgccc ggatatgatt ggaacaacca ctccagccgg ttataccgat ttattagtca
     4261 gctacaccta tcgtattgcc tttgaaggaa gtggtacgca agatttcggc ttagcagccg
     4321 ccatcgcaac cattattttc ttattagtcg gtggcttggc actcttaaat atcaaagcaa
     4381 ccaaaatgga attataaaag cgggagggat ttaacaatcc cgaccccaaa ctaactttag
     4441 gagttatata tggcaattgt tcaatctaaa tctgtgcgtt atcgggtatg ggcaacccat
     4501 ttcatcttaa tctgtttcct tgccttaatt attttccctt tattaatggt gattggcatt
     4561 tcgttacgac cgggaaatct ggctatcggt gatattattc caagccaaat ttcgtgggaa
     4621 cattggcaag ccgctcttgg ttttgatgtt acacacgccg atggtacagt cacaccgccg
     4681 ccattcccgg tgctacgctg gttatggaac tccatcaaag tggcaacaat tacctctatc
     4741 ggcattgtaa ccttatctac gacctgtgct tatgcatttg cccgaatgaa atttaaaggc
     4801 aaaaaaacca ttctacaagg tatgctgatt ttccaaatgt tcccggcagt gctttcctta
     4861 gttgccttat atgcgttgtt tgatcgtctt gggcagtatg taccgtttct tggtttaaac
     4921 acacacggtg gtgttatttt tgcctactta ggcggaattg ccttacacgt ttggacaatc
     4981 aaaggctact ttgaaacgat tgatggttca ttggaagaag ccgcttccct tgatggtgca
     5041 accccgtggc aagcgttccg attaatctta ttaccgcttt cagtgccgat tttggcggta
     5101 gttttcattc tttcatttat tgccgccatt accgaagtac cggttgcctc actcctattg
     5161 cgtgatgtaa acagctacac cctagccgtt ggtatgcaac aatacctcta tccgcaaaac
     5221 tatttatggg gtgacttcgc agcagcggcg gtcttatccg caattccgat tacgctggtc
     5281 ttcttattgg cacaacgctg gttaatcggt ggtttaactg ccggcggcgt gaaaggctag
     5341 tttgcaaaaa attctctaaa aacgaccgct tgtcgagctg atactgcggt cgtcaatctt
     5401 tattagggct gtctatgaaa aatgcgttac cttatctctg cttattctat acctcaagcc
     5461 tttttgccca atcttggcaa cattcccatt tttctgattt taacgatgat ctcgaaaaac
     5521 atttttttca atcccaagtt caattggaaa aagggagcta tccgcttagg ttcaaatttg
     5581 gcgaacaatg ttatcaaccc caacaagcga taaaattaaa tcaatcggtt gcgttagtcc
     5641 cttgtataaa tgaagctcca caactgcggt tgtttcgtca aggcaactat ctggcacaaa
     5701 ttgatctgcg aagcggcact ccgacaccca caatcagcgt agaacagcag ctacagcaca
     5761 atgaagcgat gtttcaaagt tgcccgaatt gggataaaaa accgattgaa attgatgttt
     5821 cttccacttt tgccgaaggc gaatcggtta gcgattttta ttcaggcaac accgctatcg
     5881 ttaaaaacgg caaagtcacc ttaatgccca atgaaaacgc aagcggtctg attttgctgg
     5941 aaaaaagcaa taccgaaaat acggcaacgt ttgattggaa aaatgccacc gtctattttg
     6001 tgctgaccga ccgcttttat aacggcgatc cgaccaatga ccacagctac caccgccaaa
     6061 aagacggaat gcaagaaatc ggcacctttc acggtggtga tttaaaagga ttaaccgaaa
     6121 agctcgatta cctacaacaa cttggggtaa acgtattgtg gattagctct ccgttagaac
     6181 aaatgcacgg ctgggttggc ggcggtgata agggggattt tccgcattat ggctatcacg
     6241 gttactatca tttagattgg acgaaattag atgccaatat gggtactgaa gacgatttaa
     6301 gtcgctttgt tcaacaagcc caccagcgtg gtattcgggt gctatttgat gtggtgatga
     6361 accataccgg ctacgcgacg cttgccgata tgcaggagtt taactttggc ggattttact
     6421 taacaccgga cgaaattagc cgcacattag gcgaaaaatg gacacactgg aagccgaaat
     6481 caggacaaaa ttggcacagt ttcaatgatt tcattcgctt taacgataat caggcttggc
     6541 aaaattggtg gggaaaagaa tgggttagag ctgatattgc cgattacgac agccctaaat
     6601 ttgatgattt aaaaatgtcg ctcgctgccc ttcctgatct aaaaaccgag agcgaacaag
     6661 cggtcaaatt acctgaattt tttgcaaata aaaataccaa tgccaaaaca ttaccaaacg
     6721 ccaaagtgcg tgattattta attggttggt tatccgattg ggtcagaaaa tatggcattg
     6781 acggttttcg ggttgatacc gccaaacacg ttgaaaaatc cacgtggctg gtattaaaac
     6841 aatcggcaca acaagcctta aacgaatggc aaaaagccaa tccgaacgcc ggttttaacg
     6901 atcgcttttg gatgacagga gaagcgtggg gacacggcgt gttcaaaagt gactattatc
     6961 aaaacggttt tgatgcaatg atcaatttcg attttcaaga tcaggctaaa caagggttaa
     7021 attgctttgc ccatattgag ccgatttatg ccgaaatgaa tcgcaaatta agcgacttca
     7081 atgtgttgag ctatttatct tcacacgata ctcgattatt tttccattcg gatagtgaac
     7141 aaaatatcga aaaacacaaa accgccgcaa atttgctgtt gctttcaccc ggtgcagtgc
     7201 aaatctatta tggtgatgaa agtgggcgga catttggtgc gaccggttca gacctgatac
     7261 aaggcacccg gtcggatatg aattggcaag agttgcagca agatcctcag aaacaggcat
     7321 tgcatcaaca ttggcaaaaa ttgacacaat tccgccaacg ccatccggct attggcgcag
     7381 gtgtccatca actcatcaaa aatgatagct actttgcatt taagcgtgtg ttgaatgaag
     7441 ataaagtgat ggtggtttgg gccggaaatt aaatctactt tagcttcaag ttttctctct
     7501 tctggggaaa acttgaagcc ggttcgggga aacaagttgc aaaaaattac taaaaataga
     7561 ccgcttgttc cccatgagct tgtgatcaat gataccccat caacatcagc agttctttcg
     7621 tatagctgat tgcttcgtta cgattcgtca caccgatttt ctgataaaga tttcggatat
     7681 gggttttaat cgtggttgca gccacttgca attcatctga aatttgttca ttgctatatc
     7741 cggagtaaat caaacccaat acttgccatt cccgctgagt gagcggacta atttttaaga
     7801 gttccggcac tttcggattt ttcaataatt gattcacaaa gttttcatca aaatgggcaa
     7861 atttttggcg ataaaattga ttgatgttgc gtaaaataaa ctgtgctttg tgcaatacca
     7921 gttcatctag cacattaagt tgcaataaat ggcggatctg ctgtgccatt acatcccctt
     7981 caatcacaaa cgcactgata aaattcgttt ggcgggtgag ttttagtgcc tgaattaaat
     8041 cttgctgagc caattctttc tcgccttgta aaaaataaag ccggttacga acaattaatg
     8101 cgcgatttaa atcgctaatc agagaaaatt tttcagccgt ttcaattaaa ttatctaaaa
     8161 tggctttcgc ctcgtgatat tcctcaagca agattcgaga ccgtgcaata tttcgccatt
     8221 gcacttgggt aaaatgattt ttatctgaaa ccggtgaggg gttttgaatt aaccagttcc
     8281 tcaccgcaga aacgtcattg gtcatctgcc aataaaatat acgtacctga tcggcgttgg
     8341 caatccaatc gtggtgataa gaatgagaat gttctaattg ttcgacctcg cctaataatc
     8401 gggcagtgtt atccaaattg cctcgagcca acgagatctt cgtgagtaaa gttaagcatt
     8461 gtaacttatc ttcaaattta gataaggcat tcattccggc aactgccatt gattcagctt
     8521 tatctaagtt ataccattcc cataaaatct tgcctttaga acgtagcaaa aattcataca
     8581 tcggcacttt ttgtagatgg ttttctttca caaactcgct tgctttatct aacatttcat
     8641 aggctgcttg tgaaaaccct tgggcaagca aaatttcaga ttgttgaagc tgtgaccaca
     8701 aaatattgtg gtaagtatga tgctgacgtg ccatacgctc tgctttttgc aacattgcta
     8761 atgcttctgc cagattgccg tggcaatgat gagcttcgcc aataatagac gttgcaacaa
     8821 tatgagcata ataggcattt tctgaaagat cgtttaacgc ttcagacgct aattgaagtg
     8881 cggtattctc atcaccggaa ttgatagcaa cttgtgcccg tagcacatta aattccgcat
     8941 tggcagtttt gctcaattca attttatttt cagttaatgc acgagaaaaa tccgctaaaa
     9001 taccacctac ttcaatatgg cggtgctggc tttgtaccaa ccaggctttg agtaacacca
     9061 aattagtatg ttcggttaaa tgggcgtaat ctaagcaatt taagctctct tccaataatt
     9121 tgagttctcc ttgatgaaac accgtccaag cgtgtttgct caaaatattg agtagtaatc
     9181 cggtatccga taactgcatt gcgtgatgta aggcttctgt aacatagcct aattgtaacc
     9241 acgcattcgc cgccttttga tgcagttgcg gtaattcagc atataactca ttttggcaac
     9301 ataaatttaa aaaggaagca aaaagcggat ggaatttcca ccagctatca tcactactct
     9361 gccacttact gtttgccatt tgttgtaaaa acaaaccttg cttttcgaga gactctaatt
     9421 tggtgcgact gttttgctcc cctgtaacag cctgcactaa agactcattc attgaatgca
     9481 aaaccgaaca acgcaaaata aacaaacgag tctcttcatc gactttatta agcacttcat
     9541 cggctaaata ttcgttaata tgaaaatggt ttgatttggc taaacgtttg gcaatatctt
     9601 gcagtggtac ttgtagcgtg tgtgatttat tttttgcaaa aaggctaatt agctgaaggg
     9661 ctgtgggcca cccttcaact tcgttacaca gtgcgataac atcttgctga tttaactccg
     9721 aacctaatct tgcttgaaaa aaagcggtac tttcttggtg atcaaacatt aactggttaa
     9781 tatcaatttc caataattgt tcttgcactc ttaaactggc aatacttaac gggggaattg
     9841 atcgagaaat caagataagc gtcatattag acggttgatg tttaatccaa tattttaatg
     9901 cttcgtgaat ttcatcattt tcaataatat gataatcatc aatagcaaga taaaaatgct
     9961 ctgaaaatgc cgcggcttta atcaataatt gattaaataa agctaataaa ttagctttac
    10021 gattttcctc taacaatacg tctatttctt cattgattgc tgaatgcaat gccgcactaa
    10081 aataagtggc aaaacgatct gaattattat cgccttcatc taacgcatac cagccgatat
    10141 tctttttatt ttcaatccat tgggaaacca gagtggtttt gccataacct gccggtgcat
    10201 ttatcaatac gaccggataa ctgcaagatt tgtctaattc ttgaattaaa cgttttcgag
    10261 gaatgctgtt ttgtaatcga aaagaacaaa caagttttga tggtattaac ataataaatt
    10321 caattttctc tcataacaaa atagggatga tatatccacc atttgtgttc tcactacttc
    10381 cttataatca taccatacaa gatgattatt gggatgattt gattttattt ggattttaca
    10441 taatagcgac attcatcttt aaccgggggt ttcctatgac atttaattct attgtagaaa
    10501 aatactgtcg ctactttgat gtgacagatc caaaacactt taccttacag cagtggtatc
    10561 aagttgttgc tgaaggttcc cttgagctaa tttatagcca gcctgcaacc aaaccgacag
    10621 aatcacgcca cgtgaactac ctctcaatgg agttcttaat cggtcggtta accggcaata
    10681 atttaatgaa tttaggttat tacgaacaaa ttcgtgacta tcttaaacaa tatcaagttg
    10741 aattagtaga tgttttagaa caagagcgtg atccggcatt gggtaatggc ggattaggtc
    10801 gtcttgctgc ctgcttttta gattcgatgg caactgtcgg acaaaatgca accggctatg
    10861 ggcttcatta tcaatatggt ctgtttaaac aaagcttcaa agagggaatg cagaaagaag
    10921 cagcggatac ttgggctcgt gacagctacc cgtggcatcg ttttaatccg tctaaaaccc
    10981 gccatatcgg gtttggtgga aaaatcaaac atatccaagc cgatcaatat gaatggcagc
    11041 ctaaattgac cattcaaggc aaagcctttg acttgccgat tgtaggttat aaaaacaaca
    11101 tcattcaacc attacgttta tggcaagcag atagtgacca atcttttgat tttgatgcct
    11161 ttaatgaggg taaattttta agtgccgata aaacgattgt caatgcagcc gcactaactc
    11221 aagtgctgta tccaaacgac aaccatcaag ccggacaaaa attacgctta atgcagcaat
    11281 acttccattg tgcctgctcg gttgccgata ttttagatcg tcacattagc gaaggttatt
    11341 cgttagaaga tttagcaaaa cgccaagtta ttcaactcaa tgatacccat ccaacgctcg
    11401 ctatacctga attgatgcgt gtactgttag atgaacatca attcacttgg gagcaggctt
    11461 gggatatttg cagcaatacc tttgcttaca ctaaccatac cttattacct gaagcacttg
    11521 aacaatggga tcaacgccta tttaagcagc tattacctcg ccattatcaa attgtggaaa
    11581 aaatcaatga tattttccac gacaaagtac aggcagaatt tggtgatgat gcaaaaattt
    11641 gggaaaaatt agccgtgcta tttgattacc gtgtgcgtat ggcaaacctc tgcgttgtca
    11701 cctgcttccg tgtaaacggc gttgcggaaa ttcactccga tctcttagtg accgatctat
    11761 tcccggaata ccacaaatta ttcccaacaa aattctgcaa tgttactaac ggcatcacac
    11821 ctcgccgctg gattcgacaa gctaatccac aattaagtga tttattggat cgtaccttaa
    11881 aacaagattg gacacacaat ctggaattat taaaaggcgt tgaacaatat gcggatgaca
    11941 ccggtttccg tgaagaatat caacgcatta aacgcaataa caaagtggtt ttagccaatg
    12001 aaatccataa aacattaggg ttaaatgtca atcctaatgc gatttttgat gtgcaaatta
    12061 agcgtttcca cgaatataaa cgccaacatt tgaatttgtt aaacattatt gcgacctatc
    12121 aatcgctaaa agctaacccg aaccaagact acacaccacg tctattccta ttctcgggca
    12181 aagctgcacc gggttattat ttagcaaaaa atattattca cgctattaat aatgtggcag
    12241 atattattaa taacgacaag caggtaaatg atcgactaca agtggcattc ttaccggatt
    12301 atcgagtcag tcttgcggaa aaaattattc cagcagctga tgtatcagaa cagatttcaa
    12361 tggcaggtaa agaagcctcc ggtaccggta atatgaaatt ggcactcaac ggcgcattaa
    12421 ccttaggtac gctagacggt gccaatgttg aaattgctga tatggtcggt gaggagaatg
    12481 tctttatctt cggtcacacc gtagaaagcg tgagggaatt attagcaaaa ggctaccaac
    12541 cgaaagccta ctataaccaa gatccgattc tgaaaaatgc ggttgatttc ttagccacag
    12601 gaaaagcctc taacggagat aaagaggcat tcaagctgat gttagatagc ctgttggaac
    12661 gagatccttt cttagtcttt gccgactttg atagctatcg ccaagcacaa gagaaaattg
    12721 gtgtagccta tttagatcaa gaaacttggc tgcgtagtgc aattttaaat actgctcgtt
    12781 tgggtgcatt tagctcagac cgctcaatta aagattatca acaacgtatt tggttgaata
    12841 gataataaat tcgggcgact tctacaataa aggaagtcgc ctattttctg ctgtatttca
    12901 tatgtattta tatatggaga gaaatgatga aaataactgc caaacaatat tatcgggctg
    12961 gaattatgcc ctattttttc gatgagcgtg gtgtaaaaaa aacagcatct gaaaaaataa
    13021 aacattcgtt attcaaagcc tttaacggca atactcaagc aagagaaaca cctatcccta
    13081 cggtcaacat tttttaccag caccaaccct gttttttacc ttttcattta gcggataaaa
    13141 aacatccgtt aaccggtact tggcagctac aactagaaaa ttcaaaccaa attatttccg
    13201 gcaaaattaa agcaagggga attacattac ctcaagattt gcccttaggt tatcaccaat
    13261 tacagctaaa aacggtagat aaaaccttta attgcaccat tattatcgct ccggaacgct
    13321 gctaccaacc acaagccgtc attgaacaaa aaagattgtg gggaaccttc ctacaactat
    13381 acaccttaaa atcagcccac aactggggga ttggcgattt tggcgattta aaagacttca
    13441 ttcaacagat tgccccttac caagcagatt ttatcggctt gaacccgatt cactcacttt
    13501 ttccggcaaa cccgaattct gccagcccat acagtccatc ctctcgccga tggctgaata
    13561 ttgcttacat tgatatcaat cagctagcgg aatttcaaca aagtgatgaa gcacaaactt
    13621 ggtttcattc tgctgaaatc caacaacaat tatcagaatt acgcactcag gattggttga
    13681 attacgagca aatcattccg ttgaaattga aagggctacg ctttgctttc gcaaaatttc
    13741 agcaaaatat gaccgcttgc gctgcccctg cttttatcga atttgtacaa aaaggtggtg
    13801 aaagcttaca agttcaagcc acatttgatg cccttcatca gcatctatcg gcacaatttg
    13861 ccgaccaatg gggctgggat ttctgggaga aagcctacca agactaccac tccgcagccg
    13921 tgcagcaatt tagagaaacg cataaaaccg acatagaatt ttacctttgg ttacaattcg
    13981 ttgccgatca acagctagca gaatgtgatg ctatctgccg tcagcaaaat atgcgtattg
    14041 gtatgtatcg cgatctcgcc gttggcgtca gcccgaatgg tgcagaaacg tggaatgaca
    14101 aacaacttta ttgcttaaat gcctctgtcg gcgctccgcc tgatgtatta ggtccgcaag
    14161 gacaaaactg gggcttaacc ccaatgaatc cgcatgtatt aaagcaacaa gcctaccgtc
    14221 cgtttattga gttagtcaga gctaatatga gtcattgcgg tgcattacgc cttgaccata
    14281 ttatgtcttt actccgttta tggtggatcc ccaaaggcga tagtgcggtt aatggtgctt
    14341 atattcgtta tccagttgat gatttaatcg caattttggc acttgaaagc caacgccacc
    14401 aatgcctaat tatcggtgaa gatttaggta ctgtgccaaa agaaattgtg agcaagctca
    14461 aaaatgcggg gattttatct tacaaaattt tctattttga atttgatgaa caagggaaga
    14521 gtcgagactt acagcattac ccttaccaag caatgaccac attaagcacc cacgatttac
    14581 cgactatcaa tggttattgg cgtggctatg attttgaatt aggcgaaaaa ttcggcgtct
    14641 atcctaattc gaatattttg gcaatcctta agcaagatcg agtcaatgcc aaagccaaaa
    14701 tcttacaacg cttacaagaa cataacgtag agatcgcacc tgaaattagc gagcaactta
    14761 attctccggt gaataccgca tttattcact gtttacaaac ctatgttgca aatgtaagca
    14821 gcggattatt cggcttccaa cccgaagact ggttgggtat gactgagccg gttaacattc
    14881 cgggaaccag tacacaatat gcaaactggc gacgtcggct tagtgttaac ctcgaggaga
    14941 tcttcacaga taaagatatt caagccttat taaaagaagt taatttaatc cgtaaaaatc
    15001 aataaaagtt agataagaaa aaaggcgact ttccgtcgcc ttttgggctt atatgcttga
    15061 tgtctatctt tatccacctg aaacccacaa cataatcgct agcacttgag gtagcataat
    15121 acgcaaaaac attactagtg ggtaaacagt tgcataggat aacgctgcag cgccatttcc
    15181 ctctttaatt tcattggcaa aagcaagcgc tggaggatca gtcattgagc cggcaagtaa
    15241 tccacaaatc gttaaatagt ttactttgtt atacattctg gcaatcaatc ctgctatcat
    15301 caatggaaca aaagtaataa tcgccccata gcatatccac tcaacgccct cactgcttaa
    15361 tagcgtttcg agaaatctac cgccagattt taaaccaact accgctaaaa acagtacaat
    15421 accgatttca cgcaatgcaa gattggcact tggtggcata aaccagtaga gtttactgaa
    15481 actaccaatt cttgcaagaa taagagcaac caccagtggt ccaccagcca agcccagctt
    15541 taacgcaaca gggaaacccg gtaaataaat cggtacagaa ccaagtaata ctcccaaacc
    15601 gatcccgata aatattggca acatttggac ttgttgcaac tttgagtgcg cattgccgat
    15661 aatcgtcatt accatttcaa tatcagcttg ccgccctact aaattgagaa catcaccaaa
    15721 ttgtaacgtc atatcacctg ttggtactaa ttctacaccg gctcgattta aacgagaaat
    15781 gacaacatcg tatttgcctt taagcattag ctgacgaatt tgtttcccga agactttttc
    15841 attcgtcact acagcacgtt cagaacggta aatcgtgcct ttggttgaga cagatacatc
    15901 tactgcctca cctaaaataa tctgcatttt tcgtaatgag gattcttcac ctactaagtg
    15961 taaaatatct cctatctgta gaatcgtatc tacacgtgga atagaaagct cattcccccg
    16021 ttttaagcgt gaataagcta cttcgtgcaa attaaaatca ggaatttgtt tcaacgttaa
    16081 accgtgaata tttggattag tcagacggac atttaaggta ctaagttgat ctttacttct
    16141 attttgctgt ttgttaaaag cctctgcttc cgcctcaata ttgattcgaa ataaaatccg
    16201 aatcagccac attgaaagta gaattccgat aatgccgaac gggtaagcaa tcgcataact
    16261 cattcccata atttcagtta cactctcagc gcttaactca gccaatacct gttgacctgc
    16321 tcctaaagaa ggggtattgg ttacagcccc ggagaaaatg cctaaaatca caggcaaagg
    16381 aacattgaag aatttatgaa taagaataac taaaataccg ctaatcagta caatcagtac
    16441 cgcaaaacca ttgagtttta agccagaatg ttttagtgag gcaaagaatc caggtcctac
    16501 ttgaattcca attgaataaa caaataaaat cagcccgaac tcttgaataa aatgaagcgt
    16561 atgggcatcg agcttcacat cgaattgcgc cataaaatgg gagacaaaca gcccaccaaa
    16621 taacactccc cctataccta gccccacgcc tctgatttta atatggccaa tccataagcc
    16681 tagaacggcc actaaagata ataaactgac agtaagtgca atttcgctca ttacagcctc
    16741 tctttaatat gaaatacctc aaaaatggta tccaattcta ccaaatctca aaaacgaaaa
    16801 atgagatcta tgtcaaaaaa ataaaatatt gatagtatta ctccaagatg aacttcaaaa
    16861 aagttc
//
LOCUS       DANLTI010000049        16574 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.049, whole genome shotgun sequence.
ACCESSION   DANLTI010000049 DANLTI010000000
VERSION     DANLTI010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16574
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.049"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..895)
                     /locus_tag="PXB09_001240"
     CDS             complement(<1..895)
                     /locus_tag="PXB09_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5233367.1"
                     /translation="MSKIEFEKIPNSIRKPSVLTEYNNKDAVTTLPTNEQEVLIVAPM
                     LNGEAAFTAPQKIFSDVEAENLFGKGSVAHLMVRQAIQNNPLIRLTVVGLKDHEAGIA
                     ATGQVSFTGTVTYAGVVRITIAGTAYEVAAAKGEEAQAIVARLVNVINAASYSPVVAS
                     VESETTLKLTSKAKGEISNEITLATRNTATGLTLEARAFDNGQRNALIAPALASVAGT
                     HYNVIISPFSDDENALALRSHLESVSAPIEDKPAIGVMGWRGTYATGTTLTASLNSER
                     IIVGWYKGATESNAMIAAGLGA"
     gene            complement(895..1074)
                     /locus_tag="PXB09_001241"
     CDS             complement(895..1074)
                     /locus_tag="PXB09_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HDL5233368.1"
                     /translation="MLKVKAAKGVRVPVENRPHHYIEQEAVEVENTLYYQRRIADGDL
                     IVVKETKSAKETGGK"
     gene            complement(1075..1716)
                     /locus_tag="PXB09_001242"
     CDS             complement(1075..1716)
                     /locus_tag="PXB09_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HDL5233369.1"
                     /translation="MISKIERALIERLTLGLGKMVYAVAGYAGEINDEKLDVLRLPAC
                     LVSYGGSAFEAKSMGVRGKRYQATDVFVVLVITRSMRNQTAGRLGGVTSREVGVNQLL
                     GAVKTLLINQTLDGLVHPIQPKRIRTIWNNAEVKKEKLSAYAIEFEISYNECNVLDDG
                     RFPEGVEPNEQVFKQYQGKLDEPQGDLSGFNNRIFDPNNNAETAFRTEFKDGD"
     gene            complement(1713..2138)
                     /locus_tag="PXB09_001243"
     CDS             complement(1713..2138)
                     /locus_tag="PXB09_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5233370.1"
                     /translation="MYALVDDFVLRIGEQESIELTDREMVGVVDEATLEVALADSSSQ
                     IDGYLSGRYRLPLKTVPQNLKRICCDLARYHLTSKSLVTMTEEVENRYKLCLKELENI
                     SKGVVSLAVDETNEEESATGENTVQFFNGGNRIWGRDKR"
     gene            complement(2138..2479)
                     /locus_tag="PXB09_001244"
     CDS             complement(2138..2479)
                     /locus_tag="PXB09_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233371.1"
                     /translation="MAKPKKNDNEALNTNENTPLEDKVNEQPEDKTDEQPKPPESETK
                     PDDGALINPIAFEVKLKSIHPQATYGRCGYRFNKETAVEIARKALSDEQIITLANDPY
                     LEFVPVVEGDA"
     gene            complement(2527..3444)
                     /locus_tag="PXB09_001245"
     CDS             complement(2527..3444)
                     /locus_tag="PXB09_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HDL5233372.1"
                     /translation="MFKKSELLKALDTAFRKEFSAGLKVLEPQWGTVAMKVSSSTATN
                     TYAWLGQFPKMQEWVGDRQIKNMQAQGMTIENKLFESTVAVPRTAIEDDQVGLFTPMV
                     KQAAQSAAELPDDLVFSLLKKGKTTLCYDGQNFFDTDHPVYQNVDGTGTSKTQSNITT
                     GSASGKPAFYVLDDSQAIKPLIWQERTTPEIETKFDPSESDHVFMKDQYLWGVRARGN
                     AGFGFWQLIHRVEDSELNSETLEKVLTAMRTLKGDGDKQLNIRPTTLLVPPSLEFAAR
                     KLLEAELIDGTTNTLKGVLKVVVNPFIAE"
     gene            complement(3444..4514)
                     /locus_tag="PXB09_001246"
     CDS             complement(3444..4514)
                     /locus_tag="PXB09_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HDL5233373.1"
                     /translation="MFKHKFKLNPIALSFKLNQEANGRIQLFPFGWFEAQDGRGGRWY
                     VGDENGYALADDINNTAIDLMIDYEHQTLYIAENGKGNPAAGWITKAEYISGEGLFAD
                     VKWTPQATQEIKDGVYRYLSPLFLTDGSGMVIKVLNAALTNRPALHNLQEVVAMSSQF
                     AKFLTPEEENPKMKELLIKLFALSANATDEQITEKLTALEKAKGDSPVALSDVYTELA
                     KEKSQVVALSAKVNHPDPAKFVALSDLQAVQTELNGLKQQINDKERDALIQTALSDGR
                     LLPAQKAWAEKLGKQDLVALSDFLKTVTPNPALASTQSGGEDPNKGTEKVALSAAEIA
                     AAKSLGLSEAAYIEKYKTEESK"
     gene            complement(4773..5189)
                     /locus_tag="PXB09_001247"
     CDS             complement(4773..5189)
                     /locus_tag="PXB09_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5233374.1"
                     /translation="MIEIQIHGIDEIIATLNRIAAKTANKTDLMRNIAGKMESAVLTN
                     FDEGGRPKWLGIKHRQGTPLVDTENLMGSITADYNNDSAIVGTNEPYAAIHQFGGMAG
                     RGRKVKIEARPFLQLTSQDRQDILDDVQAYWQKLLD"
     gene            complement(5340..6639)
                     /locus_tag="PXB09_001248"
                     /pseudo
     CDS             complement(5340..6639)
                     /locus_tag="PXB09_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(6626..8251)
                     /locus_tag="PXB09_001249"
     CDS             complement(6626..8251)
                     /locus_tag="PXB09_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HDL5233375.1"
                     /translation="MSKKKHNKQIKPNLNPIKNQELQTDLAEITATGRVLSDHPSNFI
                     TPAKMKAIFEDTENGDITAQHELFMDIEERDSSIFANIQTRKRAALGVDWAIVAPRNA
                     TPQEEKLRDEVDELFYQLGNLEDLVMDCMDAVGHGFAALEIEWAFNGKLWYPNAFIHR
                     PQSWFKWDKHDNLLLKTRQNTEGEPLREFGWVVHTHKSRSTQAARNNLFRSLAWLYMF
                     KHYSIHDFAEFLELYGMPIRIGKYGAGATPNEKQTLKRALAEIGHNAAGIMPESMSIE
                     LHNAANAGGAAGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRR
                     DLLVSDVKQLGQTFTQQIILPFLQINFGNIDPTRIPSFEFDTKEPADLALFAESLPKL
                     VDIGMPIPVQWAMDKLGIPEAQENEAVLGRSAPPQAVGLSANFPQKMTACECGCGGKV
                     HALSAQTKTGIKEQDALDDLADEAFSVPDFNAQFDPITKKAVAVVMACSSYDEAAEKL
                     AAAYPDLVSEEHDRYLANALFLADLLGAANAES"
     gene            complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXB09_001250"
     CDS             complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXB09_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5233376.1"
                     /translation="MKIKEFEKELEELRRQLQQNIEASFEGWDDKPQAISERRQKVLD
                     PVHGFEYFVQAYFPHYVRSEHKSQLHHYLFENLPLSVSDLSKSVRQAIAAPRGEAKST
                     ICTQLFPLWCLVRDLKRYIIIAMDTKEQAYSMLEAIKVEIESNPRLRIDFPEVAQGKV
                     WRAGVIMTAKKQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDESVETPAQRNKLHN
                     WVLKAVLKLGAAGEKFDVIYVGTILHYDSVLSRILNTKGWRRVRFKAILRFPGNMALW
                     DEWENIYLSEEGDDDTMSDLFYQQHKAEMDKGALVSWLARPILYLMKIRASDGHSAFD
                     SEYQNDPVSGDDAIFANSIQYWTELPDDLIYFGALDPSMGKAGASRDPSAILVGGYHR
                     ESGKLYVVEAQIKKRLPDLIIEDVIRLHSQYNCHRWFVETVQFQEFLQTELVKRSAQR
                     GKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDA
                     LEMLWRNALSSSAPIEWESVDDFDGEYRSKWRH"
     gene            complement(9949..10095)
                     /locus_tag="PXB09_001251"
     CDS             complement(9949..10095)
                     /locus_tag="PXB09_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233377.1"
                     /translation="MAKKKQTVVHKHYSFRWIVQLACIFGAIKLMLNGTDGWGWLLLI
                     AACM"
     gene            complement(10095..10595)
                     /locus_tag="PXB09_001252"
     CDS             complement(10095..10595)
                     /locus_tag="PXB09_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDL5233378.1"
                     /translation="MAHDVEVQKAVRQAYVFDRLSLEMAAERAGVSFGTARRWKAAAE
                     KNGDNWEKARDVQAMASGGIENIAQGLLAGFLIKYRTLMTELEENTEMPTAAKVEALA
                     ALADSFAKMTASSKKLLPETSAMATAMRAIEMMANIVKTKKPHLLPDFLEMLDELEVQ
                     FKKEFK"
     gene            complement(10603..10857)
                     /locus_tag="PXB09_001253"
     CDS             complement(10603..10857)
                     /locus_tag="PXB09_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233379.1"
                     /translation="MSRKKQKQTDSEKLDLILGGLNELNDKVDKQNEEIERLHREIQA
                     TNRLVNEMARKNRRDAVVAGGLGGGIVAVGFELLRLKFGM"
     gene            complement(10857..11114)
                     /locus_tag="PXB09_001254"
     CDS             complement(10857..11114)
                     /locus_tag="PXB09_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233380.1"
                     /translation="MIDEKLFQMLISFVVAPLVAFVGKVIFDRINRNEQTVKELKAEM
                     ESKYQSKELAHEVNRGIKEKLDDILDSLKEVNQKLDKKADK"
     gene            complement(11107..11262)
                     /locus_tag="PXB09_001255"
     CDS             complement(11107..11262)
                     /locus_tag="PXB09_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233381.1"
                     /translation="MKLIKKLRQRWQQWRFYRRRPDLAELHNVVRAAVAQGNQHPVGR
                     AKRGRYD"
     gene            complement(11277..11636)
                     /locus_tag="PXB09_001256"
     CDS             complement(11277..11636)
                     /locus_tag="PXB09_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5233382.1"
                     /translation="MITQQIAGVVGVVSTILAYAFYKSWQLKQERKLTATLKAEKQQQ
                     AVEIQQKNAEVKNAKIQQKHVSETRRIQPSAIDEQLHQHGYFRDDNGLHGVRSDLPEP
                     CGHNGNETPSACTQSDL"
     gene            complement(11633..11878)
                     /locus_tag="PXB09_001257"
     CDS             complement(11633..11878)
                     /locus_tag="PXB09_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5233383.1"
                     /translation="MKQFLLDLITNKDGTASTTGFIQFMSWLVLSGILIHAYLYDKPF
                     ISDWWFAYAGICVLGSPATKGVVSALKQKERSREAEE"
     gene            complement(11881..12414)
                     /locus_tag="PXB09_001258"
     CDS             complement(11881..12414)
                     /locus_tag="PXB09_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5233384.1"
                     /translation="MTEPIKNKATIADFNLAFDRLIGHEGGYVNDPKDPGGETNWGIT
                     IHTARANGYTGSMRAMSRADAKTIYLKAFWQRYNCEQFPPELAFQFLDACVNHGSGNA
                     SRMLQRAVGVADDGIIGKVTLAAIERYSVADVGLLFQAERLEFYTKLKHFDRFGRGWI
                     NRMAGNLRYFAKDTVEE"
     gene            complement(12500..12925)
                     /locus_tag="PXB09_001259"
     CDS             complement(12500..12925)
                     /locus_tag="PXB09_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HDL5233385.1"
                     /translation="MSEFESVEHYLPETVKEIVGVIGLPATEKLIKAFGGFSFQFSNG
                     KLYFNKLKEVLGQDDAVKLQAYMGACEVYLPRCETALRMLRNQQIYADYCQLTEQGGL
                     SGRLAIMQICPKYSVCDRVAWEAVRYYQRKHTVSQATLF"
     gene            complement(12996..13211)
                     /locus_tag="PXB09_001260"
     CDS             complement(12996..13211)
                     /locus_tag="PXB09_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5233386.1"
                     /translation="MIENPEFGYTPSNLKMLRKHHNLTQTEVANILGVGQRIVMRWET
                     ELSSTAARSDMPYTKWAELLKNLQKNF"
     gene            complement(13230..13622)
                     /locus_tag="PXB09_001261"
     CDS             complement(13230..13622)
                     /locus_tag="PXB09_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233387.1"
                     /translation="MTDYQKLLNALLNDADEDCFAVYGLRATTDVHQVGDELGNSFVW
                     VDGEKTDEELDGICTMGIQNADEAGLLNAIKNLGRDACKKFDVEFKGFQSYCGQNFIL
                     VKGDSARGGEDKGESIIRNPIVVAVFNS"
     gene            complement(13748..14095)
                     /locus_tag="PXB09_001262"
     CDS             complement(13748..14095)
                     /locus_tag="PXB09_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233388.1"
                     /translation="MKELLLTTLCLLSLPAIAMTEKAEQETANALVSGDYQQLRNVAY
                     GMETGSFGHDHNPIAACALRRVILLVNSDKVDMTDFNNEAIACRKIEVTDNQQAWETA
                     FTIAKSISATKKK"
     gene            complement(14184..14609)
                     /locus_tag="PXB09_001263"
     CDS             complement(14184..14609)
                     /locus_tag="PXB09_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HDL5233389.1"
                     /translation="MQPQTRKQMIQKIHIGKNELKLDDNAYKMLLLEAVDKPSCSMMT
                     DSELMTVLQTMKAKGFVVKSKKYGKRPTASKTAPHRQGLINKIGALLYQSQKPWDYAH
                     AIAKRSFGIERVQWLTDDQLHKLVQILASYNHRHGMSVK"
     gene            complement(14593..15147)
                     /locus_tag="PXB09_001264"
     CDS             complement(14593..15147)
                     /locus_tag="PXB09_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233390.1"
                     /translation="MKLCKCPICHSDISFEALIEDDAGRELLNTIVNIGGNCGRAVVA
                     YLGLFKPQKNSLANSRALKIVQSLLELYPPSNVLEKALMDTVEQVRRNRRETGRCEPL
                     ANHNYLKKVYESVKPQFAVVRSEAKAVSSLEQQQRQADQKKHDAVMYVERMKQMGQLE
                     AVKNTESYQIWLKWQEEKQNATAN"
     gene            complement(15147..15317)
                     /locus_tag="PXB09_001265"
     CDS             complement(15147..15317)
                     /locus_tag="PXB09_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233391.1"
                     /translation="MEYQKIPEYRLCKKKSGEIVLQQLVICELTPATWHNPYPDSRTY
                     WVDLETIEEGTE"
     gene            complement(15388..15963)
                     /locus_tag="PXB09_001266"
     CDS             complement(15388..15963)
                     /locus_tag="PXB09_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5420 family protein"
                     /protein_id="HDL5233392.1"
                     /translation="MKFRFFKGDITQEPLKSIYADYQVSKEERKDKLNAILEKYPFND
                     GLISRSGWFHRIVIGIACKATNISQVLDVKGFKVGKFNDEFYLVKPDKRYEKGKELAE
                     DFKAINEIYEKHRDFSPYILKRLNMLYFVSDFSYSPTSGRSYLAVAGICENTLLVEMP
                     MPIDKNDEPFPEIAEGLVEIKESEFLAIQGK"
     gene            complement(15986..16168)
                     /locus_tag="PXB09_001267"
     CDS             complement(15986..16168)
                     /locus_tag="PXB09_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233393.1"
                     /translation="MTEQEKNELNSQLNEALMQIIQAQKYLKQSDFIRSGVYLGTVQD
                     LLPKVHLKLLTANRKH"
     gene            complement(16235..16381)
                     /locus_tag="PXB09_001268"
     CDS             complement(16235..16381)
                     /locus_tag="PXB09_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5233394.1"
                     /translation="MKTEQKATEFDRYKHYAEKAAEAERKGNYAEAQDHWKVAKLSAK
                     KTAN"
BASE COUNT         4366 a         4082 c         3091 g         5035 t
ORIGIN      
        1 ccgcaccaag ccctgccgca atcattgcat ttgattcggt tgctccctta taccagccta
       61 caataattcg ctcactgtta aggcttgcgg ttaaggttgt gccggtggca taagtgccac
      121 gccagcccat tacaccaata gccggtttat cttcaatcgg ggcagaaacc gattctaaat
      181 ggctacgcaa ggcaagggca ttttcatcat ctgaaaacgg cgaaataatc acgttataat
      241 gcgtaccggc aacactcgcc aacgccggag caattagggc attacgctga ccgttatcaa
      301 acgcacgagc ctcaagggtt aaacctgttg ctgtattgcg tgttgcaagc gtgatttcat
      361 tgctgatttc gccttttgct tttgaggtca gtttaagtgt cgtttcactt tccacacttg
      421 ccaccacagg gctataactc gccgcattaa tcacattaac taaacgagcc acaatcgcct
      481 gtgcttcttc gccttttgcg gctgcaactt cgtaagctgt gccggcaatc gtaatacgca
      541 ccacaccggc ataagttact gtgccggtaa aactaacttg ccctgttgct gcaatacctg
      601 cctcgtggtc ttttaagccc accaccgtta aacggattag cggattattt tggattgctt
      661 ggcgaaccat taaatgagct accgagcctt taccaaataa attttccgcc tccacatcgc
      721 taaaaatctt ttgcggagca gtaaaagcag cctcaccgtt tagcattggt gcaacaatta
      781 gcacctcttg ctcattggtc ggcaaggtgg ttactgcatc tttgttgttg tattcggtca
      841 gcacacttgg tttgcgaata ctgttcggga ttttctcaaa ttcaattttt gacattattt
      901 gccccctgtt tctttagcgg atttggtttc tttgacgaca atcaaatcgc catccgcaat
      961 gcggcgttga tagtaaaggg tgttttcaac ctctactgcc tcttgttcaa tatagtgatg
     1021 cggtcggttt tctaccggca cacgcacccc tttagcggct ttcactttta acatctaatc
     1081 accatcctta aattctgttc taaatgccgt ttcggcattg ttattcgggt caaaaatccg
     1141 attattaaag cccgataaat cgccttgcgg ttcatctagc ttgccttgat actgcttaaa
     1201 gacttgctca ttcggctcaa ccccttcggg gaatctacca tcatcaagca cattgcactc
     1261 gttgtagctg atttcaaact caatagcata agcagagagt ttctctttct tcacttccgc
     1321 attattccaa atcgtgcgga ttcgcttagg ctggataggg tggactaaac cgtctaaagt
     1381 ctggttaatc aataaggttt tcaccgctcc cagcaactga ttaaccccca cctcacgact
     1441 tgttacccca cctaaacgcc cagcagtctg atttcgcatt gagcgagtaa taaccaacac
     1501 cacaaacaca tcagtggctt gatagcgttt acctcttact cccattgatt tcgcctcgaa
     1561 cgccgagcca ccataagaga caagacaagc aggcaaacgg agaacatcta acttctcatc
     1621 gttaatttcc ccggcatacc cagcaacggc atacaccatt ttgcctaagc ccagcgttaa
     1681 acgctcaatc aaagcacgct caattttgct aatcatcgct tatcacgccc ccaaatacgg
     1741 ttgcccccgt taaaaaactg cactgtattt tcgccagtag ccgattcttc ctcattggtt
     1801 tcatcaaccg ctaacgacac tacgccctta gagatgtttt ccagctcttt taagcaaagt
     1861 ttgtagcggt tttccacctc ttcggtcatc gttactaatg atttgctggt taaatgataa
     1921 cgagccaaat cacagcaaat acgctttaaa ttttgcggta cagtctttaa tggcagacgg
     1981 taacgcccac ttaaatagcc atcaatttgg ctggaagagt ccgctaaagc tacttcaaga
     2041 gtcgcttcat caaccacgcc taccatttca cggtcggtta gctcaatgga ttcctgttcg
     2101 ccaattcgca aaacgaaatc atcaaccaac gcatacatta cgcatcgccc tcaacaacag
     2161 gtacaaactc caaataaggg tcgttggcta aggtaataat ttgttcatca ctcaaggctt
     2221 tacgagcaat ttctaccgcc gtttctttat taaaacggta gccacaacgc ccataggtgg
     2281 cttgtgggtg gatagatttg agcttaactt caaaagcaat aggatttatc aaagcaccgt
     2341 catcaggctt agtttcactt tcaggcggtt taggttgttc atccgtttta tcttcaggct
     2401 gttcattcac cttatcttca agcggtgtgt tttcgtttgt gttcaaagct tcattgtcat
     2461 ttttctttgg ttttgccatt ttgctaccct ctcaaaatgg gcgtattgct acgcccaaca
     2521 ttaaacttat tcagcaataa atggattcac taccactttt aacacacctt ttaaggtgtt
     2581 ggttgtgccg tcaattaatt ctgcttcgag taatttgcgt gcagcaaact caagcgaagg
     2641 tggcacaagc aaagtggtcg ggcgaatatt taactgctta tcgccatcgc cttttaaggt
     2701 gcgcattgca gttaatactt tttcaagggt ttcactattt aactcactat cttcaacacg
     2761 gtgaattaac tgccagaaac caaaaccggc attaccacga gcacgcacac cccataaata
     2821 ttggtctttc ataaagacgt ggtctgactc acttggatca aacttcgttt caatttcagg
     2881 tgtagtacgt tcttgccaaa ttaacggctt aatggcttgg ctatcatcta gcacatagaa
     2941 cgcaggctta ccgctggcag agcctgtggt gatattactt tgtgttttac ttgtgccagt
     3001 tccatcaaca ttctgataaa cagggtgatc ggtatcaaag aagttctgcc cgtcatagca
     3061 aagggttgtc ttaccttttt tcaacaaact aaataccaaa tcatcaggta attcagccgc
     3121 actttgtgcc gcttgtttca ccattggggt aaataagccc acttggtcat cttcaatggc
     3181 agtacgaggc acagcaacgg ttgattcaaa taatttattc tcaatcgtca ttccttgtgc
     3241 ttgcatattt ttaatttgac ggtcgcccac ccactcttgc attttcggga attgtcccag
     3301 ccaagcatag gtattagtag cggtgctgga gcttaccttc attgcaaccg ttccccattg
     3361 tggttcaagc acttttaaac cagcactaaa ttctttacga aatgcagtat caagtgcttt
     3421 taataattca gattttttaa acattacttg gattcctctg ttttatattt ttcaatgtaa
     3481 gctgcttcgc ttaaaccaag cgattttgct gctgcaattt ccgcagcaga taacgccact
     3541 ttctccgtac ctttgttcgg gtcttcaccc cccgactgcg tacttgctaa agcggggtta
     3601 ggtgttaccg ttttcaaaaa gtcggataaa gccactaaat cttgcttacc gagcttttcc
     3661 gcccacgctt tttgagccgg caataaccga ccgtcagaaa gagcggtttg aattaacgca
     3721 tcacgctctt tatcgttgat ttgctgtttt aagccgttca gctcggtttg cactgcttgc
     3781 aagtcgctta acgccacaaa cttcgccggg tcagggtgat tcactttggc agagagtgca
     3841 accacttggc ttttctcttt tgccagctcg gtataaacat cacttaacgc caccgggctg
     3901 tcgcctttgg ctttctcaag tgcggtcagt ttttcggtaa tctgctcatc ggtcgcattt
     3961 gccgacaatg caaataattt aattaagagt tctttcattt ttggattttc ctcttcgggg
     4021 gttaaaaatt tggcaaattg gctagacatc gcaaccacct cttgcagatt atgcaaggca
     4081 gggcggttag ttaaggcggc attaagtacc ttaattacca ttccgctgcc gtctgtcaaa
     4141 aacagtggcg agagatagcg ataaacgccg tctttaatct cttgggtcgc ttgtggtgtc
     4201 cacttaacat ccgcaaacaa gccttcgccc gagatatatt ccgccttggt aatccaaccc
     4261 gcagcagggt tgcctttgcc gttctcggcg atgtacaggg tctgatgctc ataatcaatc
     4321 atcagatcaa tcgcagtgtt gttaatatca tcggctaacg catagccatt ctcgtcacct
     4381 acataccaac gtcctccacg cccgtcttga gcctcaaacc aaccaaaagg gaaaagttga
     4441 atacgtccat ttgcctcttg gttgagttta aaactcaatg caatggggtt tagtttgaat
     4501 ttatgcttaa acacaaaaac acctcaaaac aaattaatga ggctaaagaa tagaagattg
     4561 agaaaaaaga gtaacgggga gcaacttcca caagttgcaa attttcagaa aaaaacaacc
     4621 gcttgtattc agcgaggaat gtaacccatt ttaaaacgct ttaaatccgt tttaaaaaat
     4681 tttaaaaaag ttggaatgat aaatcaccat aaaaaaaaca aaaacgccac agagagcgat
     4741 ttaggggcta tctgtggcga ttatcttatc gcttaatcca gcagtttttg ccagtaggct
     4801 tgcacatcgt ccaaaatatc ttgcctgtct tgcgaggtta attgtaaaaa aggtcgggct
     4861 tcaattttta ctttacgccc acgcccagcc ataccaccga attgatgaat agcagcataa
     4921 ggctcatttg tgccaacaat cgccgaatca ttattataat cagcagtaat gctgcccatt
     4981 aaattttccg tatcaactaa cggcgtgcct tgccgatgtt ttatacccag ccatttcggg
     5041 cgaccgccct catcaaaatt ggtcagtacc gccgattcca ttttgccggc aatattccgc
     5101 atcaagtctg ttttatttgc cgttttagca gcaatacggt taagcgtggc aataatttca
     5161 tcaatgccgt ggatttggat ttcaatcatt tttaaccttg caagttgatt tttaaaataa
     5221 acaggggtat attcctttta cggttattag aaaagcggtg ataatctccc tgccgcagcc
     5281 tatttgagat ggcaagtcct gctcaaatga ccgagagcgt gtgtaagtga ccgggagcct
     5341 tacctaataa ccgtattttt caacagcagc ttatccaatt ctttttgtcc aatctccctt
     5401 gttgatacca gaaataattc accaaactct tctaagtatt tcaccacaac aagaatacga
     5461 taatgctcaa agtttcgtat aaagctgaaa tttttgcctt cttgcaaaat atgattaggc
     5521 tgaaaaatta catcaggaat atttgcatac acatcaaacc caaaatcctg cccctcacgg
     5581 ctataaaact gcttaatcag tgtgtcatcc gaaagccata ccgtgccgac tttactgtcg
     5641 attaagcgtt gtgtttcctc acttaaccga ccagcagcaa atttaaagtt ttgattaagg
     5701 gcatttcgca ctttaaccat ctcatcaggc gagagttttt tcgccccatc tttggcaagt
     5761 gccacagcct cttctaactt gttaaacgcc tgcttaaatt caccaccgct catttctgct
     5821 ttggtaaatt ggtaagccag cttttcaggg tataaatcca aattcggctt ataggttaaa
     5881 cgccccacat tataatcaaa acctttatca gccaatcgca ccgtaccatc agccaattta
     5941 aagccaatgg tttcctcttg gttgcctaac ttatctttcg gtcgttttgc cttcactaaa
     6001 aacggctcgc tactgccgac ttcgtcaatc cctttacgct ttaaatcccg ctcacttaac
     6061 gcaatcacgg tacaacggca attaaagccg ttcggcggat aaaaagtcgc ccaaaacgga
     6121 tcgtcataac gataaatctt accctgtaat gcttggtgag cagggcgggt gcgttggtcg
     6181 cctaccgccg aatattgcca ataagggcga ttatccacat tatccatata ccgctgataa
     6241 cgagccgcag aataagcctg ttgcatattg gtacgataaa tcgtattcaa gcggcgaggc
     6301 gtgccgaaat gctcgccggt tttcgggtcg gcaagcagtt tgccatcaat gccacgacta
     6361 atcgtcgtgt ccatacaccc agcctttccg ttcaaattct gccgtaagcg ttttcttcca
     6421 ttcattaaag gatttcccct cacgccgtgc tttttccatc gactcataaa tatcacgggt
     6481 catttcaagg ctagtgagct tgctaatggt ggcggctcgc cccaatgcag aatcaaataa
     6541 ttcctgctta aacactttat tcgcaagcaa cttcttctgc cgtaaaaact caatcgcctg
     6601 cttaggctct agtccaatgg caaaattaac tttctgcatt cgcagcccct aataaatccg
     6661 ccaaaaataa cgcattcgct aaatagcggt cgtgttcttc actcactaaa tcagggtagg
     6721 ctgccgccaa tttttctgct gcctcatcat aagagctaca cgccattacc accgccaccg
     6781 cctttttcgt gatggggtca aattgggcgt taaaatccgg cacggaaaaa gcctcgtctg
     6841 ccaaatcatc taaggcatct tgctctttaa tgcccgtttt ggtttgggcc gacaaagcgt
     6901 gaaccttgcc cccacaaccg cattcgcaag cggtcatttt ttgcggaaaa tttgcggata
     6961 accccaccgc ttgtggcggg gcagaacgcc ctaacaccgc ttcattttct tgagcttcgg
     7021 gaataccgag tttatccatc gcccactgca ccggaatcgg cattccaata tccaccaatt
     7081 tcggcaagct ctcggcaaat aacgccaagt cggcaggctc tttggtatca aactcaaaac
     7141 tcggaatgcg ggttgggtcg atattgccaa aattaatttg cagaaacggc agaataattt
     7201 gttgggtaaa cgtctgcccc agctgtttca cgtccgacac caacaaatca cgccgcactt
     7261 cgttatgcac attgccgagt gcattggtag agcttttgcc gtctgcaccg ctggttaagg
     7321 tttgccccaa aatcaagcgg gcgatagact tctcacacca atccaccatt tgcaaaaacg
     7381 gattattgcc ggctgcaccg cctgcattag cggcgttatg caactcaata ctcatcgact
     7441 ccggcataat tccggcagcg ttgtgtccga tttccgctaa tgcacgttta agcgtttgtt
     7501 tttcgtttgg tgttgcccct gcaccgtatt taccaatgcg gataggcata ccatacagct
     7561 ccaaaaactc ggcaaagtcg tggatagagt agtgtttaaa catatacagc caagccagcg
     7621 agcggaataa attattgcgt gccgcctgtg tggagcggga tttatgcgta tgcaccaccc
     7681 agccaaattc tcgtaatggc tcaccttcgg tattttgtcg ggttttcagc aacagattgt
     7741 cgtgcttatc ccacttaaac cacgattgag gacggtggat aaaggcgttc ggataccaca
     7801 atttaccgtt aaacgcccat tcaatttcga gggcagcaaa accgtgtccc acagcgtcca
     7861 tacagtccat caccaaatct tcaaggttgc cgagctgata aaataactca tcaacctcat
     7921 cacgcagttt ttcttcctgc ggtgtggcat tgcgaggggc aacaatcgcc caatctacgc
     7981 ctaatgcggc acgcttacgg gtttggatat tggcaaaaat agagctgtcc cgctcctcaa
     8041 tatccataaa taattcgtgt tgagcggtaa tatcgccatt ctccgtatct tcaaaaatcg
     8101 ctttcatttt agcaggcgta ataaaattgc tcggatggtc ggagagtacc cgacctgtag
     8161 cggtaatttc ggctaaatcc gtctgcaatt cttgattttt aatcgggttt aaattcggtt
     8221 taatctgctt gttatgcttc tttttgctca taaattttcc ttttcagagc ttagttacgc
     8281 tcaatatagt ccccctcttt agcaaagagg ggagttacat taatgccgcc acttactgcg
     8341 atactcaccg tcaaaatcat ctacactctc ccactcaatc ggggcagagc tgctgagtgc
     8401 atttcgccat aacatttcca acgcatccgg accatcatcg tgatcggctt tcggaaaatg
     8461 gcgaagctgg ctttcaagcg tagattgcga gcggtgcaac aaaatcaaac cgttggcaat
     8521 atgcggttgc aagctctcaa tccgtaacat cttgtcactg ttcggcttgg ttgccgttgc
     8581 cggcaccggc ttaccacgct gggcagaacg cttgaccagt tccgtctgca aaaactcctg
     8641 aaattgcacc gtctccacaa accagcggtg acagttatat tgcgaatgca gtctaatcac
     8701 gtcctcaata attaaatccg gcaatcgttt tttgatttgt gcctcaacaa catagagctt
     8761 gccactctca cgatgatagc caccgaccaa aattgcagat gggtcacggc ttgccccagc
     8821 tttccccatt gaggggtcta acgccccgaa ataaatcagg tcatcaggca gttccgtcca
     8881 atactggata ctgttggcaa aaatcgcatc atcacccgag acagggtcat tttgatactc
     8941 ggagtcaaat gctgagtgcc catcactagc acggattttc atcaagtaga ggatagggcg
     9001 agctaaccaa gagactaacg ctcctttatc catttctgct ttatgctgtt gataaaagag
     9061 atcagacata gtgtcatcgt ccccttcttc cgagaggtat atattttccc attcgtccca
     9121 taacgccata ttgccgggaa agcgtaaaat ggctttaaaa cgaactcgcc gccaaccttt
     9181 tgtatttaaa atacggctaa gcacactgtc ataatgtaga attgtgccga catagataac
     9241 atcaaacttt tcacctgcag caccaagttt taaaactgct tttaaaaccc agttatgcaa
     9301 tttattacgc tgtgcaggtg tttctacgct ttcatcattc tcaatatcat caagtactac
     9361 taaatccgga cgataagctc cgtggcgacg accacgcaat ttttgcccag cccccacagc
     9421 ttcaactttt tgttttttag ccgtcataat gacacctgca cgccaaacct tgccttgtgc
     9481 aacctcgggg aaatcaattc ttaaacgagg gttagattca atttccactt taatagcttc
     9541 aagcatactg tatgcctgtt ctttggtgtc catcgcaata atgatgtatc tttttaaatc
     9601 acggactaaa caccacagcg ggaataattg cgtacaaatc gttgattttg cctcgccacg
     9661 aggggctgca atcgcttggc ggactgactt agaaagatca cttaccgaaa gcggtaaatt
     9721 ctcaaagaga taatgatgca actgtgattt atgttcagac cgcacatagt gtggaaaata
     9781 agcctgcaca aaatactcaa agccgtgaac agggtctaaa accttttgac ggcgttcgct
     9841 aatggcttgt ggtttatcgt cccaaccctc aaaactcgct tcgatatttt gttgtaactg
     9901 tcgccgtaat tcttccagtt ctttttcaaa ttctttgatt ttcataaatt acatacaagc
     9961 tgcgataagc aacaaccagc cccaaccgtc tgtaccgttg agcattagtt ttattgctcc
    10021 gaaaatacaa gcaagttgga caatccaacg gaaagagtaa tgcttatgca ctacagtttg
    10081 ttttttctta gccattactt aaactccttt ttgaattgca cttctagctc atctaacatt
    10141 tctaaaaagt caggcaataa atgcggtttc ttggttttga cgatattcgc catcatctca
    10201 atcgcacgca tagcggttgc cattgcactt gtttcaggca atagtttctt gctcgatgcc
    10261 gtcatcttcg caaacgaatc agccagagca gctaatgcct caaccttagc tgcggttggc
    10321 atttcggtgt tttcctcaag ctccgtcatc aacgtgcggt acttaattaa aaaaccggct
    10381 aacaagcctt gagcgatatt ctcaatacca ccgcttgcca tcgcttgcac atcacgagct
    10441 ttttcccagt tatcaccgtt cttttcagca gccgctttcc aacgccgtgc cgtgccgaat
    10501 gatacccctg cacgttctgc tgccatttcg aggcttaaac ggtcaaacac ataggcttgc
    10561 cgaaccgctt tttgtacttc aacatcgtgt gccatacgcc ctctacattc caaatttcag
    10621 gcgtaacaac tcaaaaccca cagcaacaat gccaccaccc aagccaccgg caactacagc
    10681 atcacggcgg tttttacgtg ccatttcatt cactaaacga ttagtcgctt ggatttcacg
    10741 gtgtaagcgt tcgatttctt cgttttgttt atccacctta tcgtttagct catttaatcc
    10801 acctaaaatc aggtctaatt tttccgaatc ggtttgcttt tgttttttac ggctcattac
    10861 ttatccgcct ttttatcaag tttttggttt acttctttga gcgagtctaa aatatcgtcc
    10921 agcttttcct taatccctct attcacttcg tgggcaagct ctttggattg atatttgctc
    10981 tccatttctg cttttagctc ttttaccgtt tgctcattgc ggttgatacg atcaaatatg
    11041 accttgccta caaacgccac taacggagca actacaaaag agatcagcat ctgaaacagt
    11101 ttttcatcaa tcataacgcc cccttttggc tcgcccgacc gggtgttgat taccttgtgc
    11161 caccgccgca cgcaccacgt tatgcaattc tgcaaggtca ggacggcggc gataaaaacg
    11221 ccattgttgc caacgctgtc tgagtttttt aattaacttc attctggcaa acttcctcat
    11281 aggtcagatt gtgtgcaagc acttggcgtt tcgtttccat tgtgtccgca cggctcgggt
    11341 aaatcagacc gaacgccgtg caacccgttg tcgtcacgga agtaaccgtg ttggtgcaac
    11401 tgctcatcaa tggcactagg ctgaatacgg cgagtttcac taacgtgttt ttgctgaatt
    11461 ttggcatttt taacctctgc atttttttgt tgaatttcga ccgcttgttg ctgcttttcc
    11521 gcctttaatg tagcggtaag tttccgctcc tgctttaatt gccagctttt ataaaaggca
    11581 taggctaaaa ttgtgcttac tacaccaacc acacctgcaa tttgttgagt aatcattctt
    11641 cagcctccct tgagcgttct ttttgtttta acgcacttac cacccctttt gtggctgggc
    11701 tacccaatac acaaatacca gcataagcaa accaccagtc ggaaataaac ggcttatcgt
    11761 aaaggtaggc gtgaattaaa atgcccgata acactaacca gctcataaac tgaataaagc
    11821 cagtggtgct ggctgtgccg tctttattgg taattaaatc aagtaaaaat tgcttcacga
    11881 ttattcctcc accgtgtctt tggcaaaata acgcaaatta cccgccattc ggttaatcca
    11941 acctctacca aaacggtcaa agtgtttgag tttggtgtaa aactcaaggc gttctgcctg
    12001 aaataacaag cccacatccg caaccgaata acgctcaatc gcagccaaag tcactttacc
    12061 gataatgccg tcatcagcca cacctaccgc tcgctgtaac attcggctag cattgcccga
    12121 accgtggttt acacacgcat ctaaaaactg aaaagccaac tcaggcggga actgctcaca
    12181 gttataacgt tgccaaaagg ctttgaggta aatagttttc gcatccgcac ggctcattgc
    12241 acgcatagag ccggtatagc cattcgcacg ggcagtatgg atagtgatac cccaattcgt
    12301 ttcgccaccg gggtctttcg ggtcgttcac ataaccgccc tcgtgtccga taagacggtc
    12361 aaatgcaaga ttaaagtcag caatagttgc cttgtttttg ataggttcag tcataaaaaa
    12421 agcctcttta aattcaatga tgatttaaag agactttaat gatttagagc aacggggagc
    12481 aggcgaaagg attccacact taaaacaagg tagcttgcga aacggtatgc ttacgctgat
    12541 aatatcgtac tgcctcccac gcaacacgat cacacacgct gtatttaggg caaatttgca
    12601 taatcgcaag cctgccactt agccctcctt gctcggttaa ttgacaataa tcggcataaa
    12661 tctgctgatt acgcaacatt cttaatgcgg tttcacaacg tggcaaatag acctcgcaag
    12721 ctcccatata agcctgtaat ttcactgcat catcttgccc taatacctct ttgagcttat
    12781 taaaatagag ttttccgtta gaaaattgga atgaaaagcc accaaaggct ttgattagct
    12841 tttcagttgc cggcaaacca atcacgccca caatttcttt caccgtttcc ggcaaataat
    12901 gttcgacact ttcaaattca gacataaaaa atccccttga ataatttcca cgaaagccat
    12961 tatccaaggg ggttattcaa atctgtaata cttacttaaa aatttttttg caaatttttt
    13021 aaaagctcag cccattttgt gtacggcata tctgatctag ctgcggttga tgacagttct
    13081 gtctcccacc gcattactat tctttgcccg acccctaata tgttagctac ctctgtttgt
    13141 gtgaggttat ggtgctttct tagcattttt aagttgcttg gtgtgtatcc aaactctggg
    13201 ttttcaatca ttcacctccc tccattaaac tagctattaa atacagcaac aacgataggg
    13261 tttctaataa tgctctcgcc tttatcttct ccgcctcttg cactatcgcc tttaactagg
    13321 ataaagtttt gcccacagta tgactggaaa cctttaaatt caacatcaaa ttttttgcaa
    13381 gcatcacgac ctagattttt aatagcattt aacaaacctg cttcatctgc attttggatt
    13441 cccattgtac aaatgccgtc taattcttca tctgtttttt caccatcgac ccaaacaaaa
    13501 gaatttccta attcatcgcc aacttgatgc acatctgtag ttgctcttaa accataaaca
    13561 gcgaagcagt cttcatcggc atcgtttagt aaagcattta aaagtttttg gtaatctgtc
    13621 attttaattt ctcctgtttg gctatgggtg cattatagta atataattac ctattgcaag
    13681 tgatttttcg tttttttctt aaattttttt atgtaaataa aaaagaccgc ttgaaagcgg
    13741 tctaaattta ttttttcttg gttgcagaaa tggattttgc aatggtaaag gcagtttccc
    13801 aagcctgttg attatctgta acctcaattt tacggcaagc aatcgcctcg ttgttaaagt
    13861 cagtcatatc aaccttgtcc gaattaacaa gcaaaataac acggcgtaaa gcacaagcag
    13921 caataggatt gtgatcgtgc ccaaacgaac cagtttccat tccgtaagct acatttctta
    13981 actgttgata atcaccactt acaagagcat ttgctgtttc ttgttcagct ttttctgtca
    14041 ttgctattgc tggtaacgac aataagcata aggttgttaa tagcagttct ttcattttaa
    14101 atacctttaa aagttgatta aaaaacacct aaaatctacc acaaaaaagc ccactattta
    14161 aagtgggcta tgcaataaat ttattattta acactcattc cgtgcctatg gttataactc
    14221 gccaatatct gcactaattt atgcaactga tcatctgtca gccattgcac ccgctcaata
    14281 ccaaacgagc gtttggcaat ggcgtgggcg taatcccacg gcttttggct ttgatacagc
    14341 aacgccccga ttttatttat caacccttgc cggtgagggg cggttttact tgctgttggg
    14401 cgtttaccgt attttttcga cttcaccaca aaccctttag ctttcattgt ttgcagtacg
    14461 gtcattaatt cgctatcggt catcattgag cagcttggtt tatccaccgc ctctaacaac
    14521 agcattttat aggcgttatc atccagtttt agctcatttt tgccgatatg gattttctgt
    14581 atcatctgct ttctagtttg cggttgcatt ttgcttttcc tcctgccatt tcagccaaat
    14641 ttgataactt tcggtgttct taacggcttc cagttgcccc atttgcttca ttcgttccac
    14701 atacatcacg gcatcgtgtt tcttttggtc tgcttgccgt tgctgttgct caaggctact
    14761 cactgctttc gcttcacttc ttactactgc aaattgtggc ttcacgcttt catatacttt
    14821 cttcaagtaa ttatgatttg ccagcggctc acatctgcca gtttcacgcc gattccgtct
    14881 tacttgttcc accgtatcca ttaaggcttt ttctaacaca ttagagggag ggtaaagctc
    14941 caataaactc tgcacaattt tcaaggctcg gctattggca aggctgtttt tctgtggctt
    15001 aaataaccct aaatacgcca ccaccgcacg cccacaattc ccaccgatat tgactatcgt
    15061 atttaacaac tcacgccctg catcatcttc aatcaacgcc tcaaacgaga tgtcggaatg
    15121 gcaaatcggg catttgcata gtttcatcat tctgttcctt cttctattgt ttcgagatca
    15181 acccaataag ttcgactatc agggtatggg ttatgccaag ttgctggagt tagctcgcaa
    15241 ataactaatt gttgtaacac aatctctccc gatttctttt tacataaccg atattcagga
    15301 attttttgat attccatttt atgctcctat aaaacacatt attcagccca cttaaatagg
    15361 ggttaaatgg gctgtaaatg ggttttatta cttcccctgt attgctaaaa actcactttc
    15421 tttaatctca accaatccct ctgcaatctc aggaaatggt tcatcatttt tatcaatagg
    15481 cattggcatt tcaaccagta aggtgttttc acaaatgcct gctacggcta aataacttct
    15541 acctgatgtt ggggaataac taaaatcact tacaaaataa agcatattca aacgttttaa
    15601 gatatagggc gaaaaatcac gatgtttctc ataaatttca ttaattgctt taaaatcttc
    15661 tgcaagttct ttcccttttt cgtaacgttt atcaggtttg acgaggtaaa actcatcatt
    15721 aaatttaccg accttgaacc ctttaacatc taaaacttgg ctaatattgg ttgctttaca
    15781 agcaatccct ataactattc tatgaaacca gcctgaccta ctaattaatc catcattgaa
    15841 aggatatttt tctaaaatag cattgagctt atccttgcgt tcttctttag atacttgata
    15901 atctgcataa atgcttttta gtggctcttg ggttatatcc cctttaaaaa atctaaattt
    15961 cattcttaac tccttactgg ggtggttaat gtttccgatt tgccgttaat aacttcaaat
    16021 gcacctttgg caacaaatcc tgcaccgtgc cgagataaac accactgcga ataaagtcac
    16081 tctgttttaa atatttttgt gcctgaataa tctgcattaa cgcctcgttt aattggctgt
    16141 taagttcgtt tttctcttgt tcggtcatca tctcctccta aaacggtttc ttatgcatac
    16201 gtttacaaaa taccgctcgt tgccccgccc agtctcagtt agcggtcttt tttgctgata
    16261 attttgcaac tttccaatgg tcttgggctt ctgcataatt gcctttacgt tcggcttccg
    16321 ctgctttctc ggcataatgt ttgtagcggt caaactcggt cgccttttgt tctgttttca
    16381 ttttttcctc ctgtggttaa aacactttat aaatgccctt ctatcttgtc cccctctttg
    16441 aaaaagaggg gctaggggag atttttaaag ggcattgaaa aggtttttta actaagactt
    16501 tctttttaac tgatttaaaa tatgcaaatg atttaataac gatgcatatt ctttatcatc
    16561 aaagtccatc atta
//
LOCUS       DANLTI010000050        16517 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.050, whole genome shotgun sequence.
ACCESSION   DANLTI010000050 DANLTI010000000
VERSION     DANLTI010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16517
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.050"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(110..625)
                     /locus_tag="PXB09_001269"
     CDS             complement(110..625)
                     /locus_tag="PXB09_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5233395.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GARREVTEWHRIVFYRRQAEVCGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQG
                     DVLQMLGSRQGNDMGGQQGGWGNSAPAGNSYNQGNSNYGYNQTQSAAPQSKPAPQPEP
                     AMNNFDDDIPF"
     gene            780..3608
                     /gene="uvrA"
                     /locus_tag="PXB09_001270"
     CDS             780..3608
                     /gene="uvrA"
                     /locus_tag="PXB09_001270"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDL5233396.1"
                     /translation="MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKG
                     EHVKLLENLTASGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLA
                     ESFETALDLSGSTAIIADMDDPNAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGA
                     CPTCDGLGVEQFFDAKKVVQNEEVSLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLET
                     PFGQLPKKYQNIILNGTKEEIEFVYVNDRGDKVKRKHAFEGVLNNMARRYKETESNSV
                     REELAKYINNRPCMDCEGSRLRREARYVFLDKTNLPMVSEKSIGEALTFFEELKLAGQ
                     KEKIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVM
                     YVLDEPSIGLHQRDNERLLNTLVHLRNLGNTVIVVEHDEDAIRAADHIVDIGPGAGVH
                     GGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIPAQRVPYEPTKLLTLSGASGNNLKK
                     VKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNALNRAENSDVAPYESIDGLSHFD
                     KVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEARARGYNVGRFSFNVRGGRCE
                     ACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLEMTVEEAREF
                     FAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILD
                     EPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI
                     IATGTPEEVAKDKRSHTARFLKEILAKG"
     gene            complement(3700..5433)
                     /gene="dauA"
                     /locus_tag="PXB09_001271"
     CDS             complement(3700..5433)
                     /gene="dauA"
                     /locus_tag="PXB09_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDL5233397.1"
                     /translation="MLNKWFLTKNAFLAVKPFSALKDALNAGYGKQHLIRDIISGLTV
                     GVIAIPLSMALAIASGVPPQHGLYTAIVAGIVIALTGGSRFNISGPTAAFVVILYPVT
                     QQFGLSGLLMATMLSGGILVLMALLRLGRLIEYIPLPVTLGFTCGIGIVIATLQIKDF
                     LGLSIEKMPEHYLGKLEAIFSALPTINWADTLVGVVTLLVLTRWHKLRLPIPGHLPAV
                     FIGTLLSLLLIHFGQNVATIGSAFHYTLSDGTTGYGIPSVLPEFVLPWNLPNAEGNRI
                     DWNLTTIQALLPAAFSMAMLGAIESLLCAVVCDNMTDTKHHSNNELLAQGLGNIASPF
                     LGGITATAAIARSAANVRSGAVSPISSVVHALLVLFALLFLAKALSYLPLSSMAALLL
                     VVAWNMADIPQIIQLTRRSGKNEIAVLLTCITLTVLFDMVIAITVGVLLASLLFIRTI
                     AEMTKSFEMAHPTDLNDVLVYRISGPLFFAAADNLFADLHNKTVHTDHQIKHIVLQCD
                     AVTVLDAGGIHALTRFVQHMLPHQQLHLCNVQFQPMRMLVRSQKTVNEIPQIQFSSDL
                     ESAFDKIRQAN"
     gene            5675..6607
                     /locus_tag="PXB09_001272"
     CDS             5675..6607
                     /locus_tag="PXB09_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233398.1"
                     /translation="MDSLIHFLSAFLTNITWIGALELGLIYSLVALGVLISYKILDFP
                     DLTADGSFPLGGAVCVISILNQVDPWLATLYGTLAGAVAGMVTASLHIGFKIEKLLAS
                     ILMMIALYSINLRIMGMPNIAILGETTIYDVMPIESDLQLALVRLVMALLVVIIVKGL
                     FDLFFATEIGLAVRATGTNSRMAKAQGIAINKMTILGMAISNALIALGGALYVQSNGG
                     VDISIGVGTIVIGLAAVIIGEAIFSVKRIIWLTFAVIIGSILYRFFIALALNNETLNG
                     IGFGPQDLNLITALLVVIVLAVPRIKHKLLGKRG"
     gene            6609..7406
                     /locus_tag="PXB09_001273"
     CDS             6609..7406
                     /locus_tag="PXB09_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233399.1"
                     /translation="MIELNNLFITFNKGTAIENPVLRGLSLKVEQGEFVSVIGSNGAG
                     KSTLLNAISGDCAVDSGEILIQGNKVNQSTTWQRANQVARVFQDPMAGTCESLTIEEN
                     MALAYQRGRKRGLGFAIKRQMRELFKDKLALLGLGLENRLTDQMGRLSGGQRQAVSLL
                     MASLQPSNILLLDEHTAALDPKTTDFVLELTNKIVREQKLTTLMVTHSMRQALDYGDR
                     TVMLHQGQVAFDVSGEQRQKMDVPDLLQLFQQSRHEQLSDDGLLLGN"
     gene            7493..7714
                     /locus_tag="PXB09_001274"
     CDS             7493..7714
                     /locus_tag="PXB09_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233400.1"
                     /translation="MLSIFKTPVEKETLDDWAKISVDVAKVAILAIPVILFGKEPTLI
                     KLTNLALLVLSIYVFLTLGRKLRQLKEVL"
     gene            7897..9822
                     /locus_tag="PXB09_001275"
     CDS             7897..9822
                     /locus_tag="PXB09_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDL5233401.1"
                     /translation="MTKYDDKIQHAFSENGLLSQNISGFRPRQAQLEMAQVVAKAVKF
                     ATPVVVEAGTGTGKTFAYLVPALLSGKKTILSTGSKNLQDQLFNRDLPTIQKALKYKG
                     KIALLKGRANYLCLERLDQVTAMGVLGDKSVLTDLKKVSKWQNATKTGDLSECITIAE
                     DSPILPQLVSTTESCLGSDCPHFKDCYVVQARRKAMEADVVVVNHHLFCADMAVKKTG
                     FGELIPEAELVIFDEAHQLPDIASQYFGQSLSSRQLFDICKDTNIVYRTELKDLSQLG
                     KAADHLTKVVQDFRLLMGGEGQIRGNLRELFRDKKVVDGLVKVAENIDFLSEVAKKSL
                     GRSETLDKIFERLAEVKVQLKKLMDTSVTGYCYWYEANGRSFGLHITPLMVADKFGEQ
                     LKNQQIGWVFTSATLEVGGKFDHFCQRLGIENAEQLVLQSPFDYQHQSLLCVPRYLPD
                     TNKSNTLTALGQLLKPVIEANKGRCFLLCTSYYMMRGLADFLREHSSLNVLLQGETSK
                     SRLLEKFVKEDHSVLVATQSFWEGIDVRGDDLSLVIIDKLPFTSPDEPLLKARMEDCK
                     IQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDSRLVMRNYGQTFLKSLPP
                     SRRTRDLGNVIQFLKQK"
     gene            9896..10261
                     /locus_tag="PXB09_001276"
     CDS             9896..10261
                     /locus_tag="PXB09_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDL5233402.1"
                     /translation="MLSTLLRMVASLALLFVMLYLGKLIVYLFPIGIPDSILGMLILF
                     GCLVIGIVKVEWVIPSAKPLTRYITLFFLPICVELIEHLELLRQNLNTFVLATALSTL
                     VSVVAIGVFAQWIFHYKRG"
     gene            10263..10949
                     /locus_tag="PXB09_001277"
     CDS             10263..10949
                     /locus_tag="PXB09_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDL5233403.1"
                     /translation="MSYLYTVLTVIMFIAGLKISQKLKSSFLNPFLIALALLIGVLLI
                     FNIPYQDYYQGNSPLNNLLGVSVVALAYPFYEQLPHIRKKWRQIVVILLFSTIITMIT
                     GLGFSLLFGASQEILAAILPKSVSMPMAIIITNEINGNVAIAAVGVMIAGLVGSILGF
                     TLLRLAKVRNVMVIGLSMGAASHALGTARCLEHSMKAGSYSSIALVACGVLSSIFAPL
                     IFNVIVTLCY"
     gene            11033..12796
                     /gene="msbA"
                     /locus_tag="PXB09_001278"
     CDS             11033..12796
                     /gene="msbA"
                     /locus_tag="PXB09_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDL5233404.1"
                     /translation="MQEQITQEKDLSTLKTFKRLWPTISPFKAGLITGAVALVLNALV
                     DSSLIYLLKPLLDEGFGQANNDFLKLMAVLVVVFILVRGITNYIASYCLAWVSGKVVM
                     TLRRHIFQHLMYMPVSYFDNNPTGRLLSRVTYDTEMVASSASHSLVTIVREGAYLLSL
                     FVVMIYTSWQLSIVLFVMAPIIGVLISFVSKYFRQLSRNIQSSMGELTVTTEQMLKGH
                     KVVLSFGGQEIEKARFDRVSNDMRRKGMKVVSADGISDGVVQLIASFALSAVLYVATF
                     PEVMSENLTAGSFTVVFSSMMAMLRPLKSLTNVNSQFQRGMAACQTLFEFLDLKTEKD
                     HGLISVAKAEGNVEFKKVSFSYEGKEEKALDNISFTIPKGKTVALVGRSGSGKSTIAN
                     LLTRFYDVTDGQILLDGINIQDYRLKNLREQCSVVSQQVHLFNDTIANNIAYAAIDKY
                     SREEIIAAAKAAHAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRNSPVLV
                     LDEATSALDTESERAIQSALEVLQKDRTVLVIAHRLSTIEKADEILVVDHGNIIERGS
                     HTELLAQGGAYKQLHSLQFGA"
     gene            12885..13517
                     /gene="lolB"
                     /locus_tag="PXB09_001279"
     CDS             12885..13517
                     /gene="lolB"
                     /locus_tag="PXB09_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDL5233405.1"
                     /translation="MKKLTKLLSLSALLVLTACNSVLNASTEVQQPTVQIPHDDPQWQ
                     QHLAKLSQIQGYTATGQFGYISPEERFSSHFNWRYTNPIQFGLELSSNLSTKSLKLER
                     NKRGLTVSDNEGNSRSDRDVDALMQEIIGVSFPIDQFAYWVKGLPEKDGNYIVNEKRQ
                     LSQFSYPLNGTLWKASYVEYHEDRVPNLPKLIVLENGTQTLKIRIEKWAY"
     gene            13505..14359
                     /gene="ispE"
                     /locus_tag="PXB09_001280"
     CDS             13505..14359
                     /gene="ispE"
                     /locus_tag="PXB09_001280"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDL5233406.1"
                     /translation="MGVLMKKVTLPSPAKLNLFLYITNKRADGYHELQTLFQFLDFGD
                     EIEIEITESSEVELINPVEGVATEENLIYRAAKLLQKTTACRQGCRIGIKKNLPMGGG
                     VGGGSSNAATVLVGLNHLWNTELSLEKLAELGLSLGADVPIFVRGMAAFAEGVGEVLT
                     PCDPQEKWYVVLKPEVSISTAAVFTDPNLPRNTPKRPLAELLSLPWENDCEKVVREKY
                     SAVEDLIQELLQYAQFRLTGTGACIFAEFETKAEAEQVFAHKPEAVFGFVAKGQNISP
                     LHQMLFQI"
     gene            14385..15335
                     /locus_tag="PXB09_001281"
     CDS             14385..15335
                     /locus_tag="PXB09_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDL5233407.1"
                     /translation="MTDIKLFAGNATPELANRIAKHLYTSLGNATVGRFSDGEIQVQI
                     NENVRGGDIFIVQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVIADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLIDDILKKS
                     DLVNPIVVSPDIGGVVRARAVAKLLNDTDMAIIDKRRPKANVSQVMHIIGDVADRDCI
                     LVDDMIDTGGTLVKAAEALKERGARRVFAYATHAVFSGTAAQNLANPALDEIVVTDTI
                     PLSNEIKALNKVRVLTLSGMLAEAIRRISNEESISAMFDA"
     gene            15413..16423
                     /gene="pyrD"
                     /locus_tag="PXB09_001282"
     CDS             15413..16423
                     /gene="pyrD"
                     /locus_tag="PXB09_001282"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDL5233408.1"
                     /translation="MYSLIRKLLFALDTEKAHQFSIQALALAGKSPFSILPTPDNPTQ
                     VMGLTFKNPIGLAAGADKNGEAIDGFGKLGFGFIEVGTITPLAQDGNPKPRQFRIVDA
                     EGIINRNGFNNKGVDVLVENVKNATYSGILGINIGKNAVTPIEHSFDDYQICLRKVYQ
                     YADYVAVNISSPNTKNLRSLQYGEALDDLLRNLKNEQAQLSQKMGKYRPLVLKIAPDL
                     TDEEIVSVADSLIRYQIDGVIAGNTTLSRESIAGLPYSEQLGGLSGKPLHSLSTRLIS
                     KLSAELGERIPIIGCGGVHSLESGQEKVNAGASLLQVYSAMIYQGPSLIQTLAKHLQL
                     NS"
BASE COUNT         4752 a         3124 c         3824 g         4817 t
ORIGIN      
        1 agtgttccct attattttga gtaaggtagg ggcgctttat atgagtagct ttttatttca
       61 tcgaaatgcg gtgtatggaa cccatgagct acttaagtca atactttgat tagaacggaa
      121 tatcatcatc aaaattgttc attgccggct caggctgtgg tgccggttta gattgcggtg
      181 cagcactttg ggtttggttg taaccataat tgctgttgcc ttgattgtag ctattacccg
      241 caggagcaga atttccccaa ccgccttgct gaccgcccat atcattacct tgacggctgc
      301 cgagcatttg tagcacatcg ccttgaattt cggtggtgta acgatcttgc ccgttttggt
      361 cttgccattt acgggttttt aaacgtcctt ctacgtaaac ttgagagcct ttacgtaaat
      421 attgcccgca tacttctgct tgacggcggt agaatacaat acgatgccac tcggttactt
      481 cacggcgtgc accggtgttt ttatccgtcc agctttctga ggttgccaca ctaatatttg
      541 caaccgcttc gccatttggc attgtacgca tttcagggtc gttacctaaa ttaccgacaa
      601 taattacttt attgatacca gccataaaat cctctgtttg ataaattaaa ctaaaatttg
      661 ctaagtattc tacctgaaaa tccaaaagat gaacaccaaa aaactgatat tttgtacagt
      721 tttattaaaa tatgcgataa tgatcgaaaa ttgagaaaat agcactggac attaaaaata
      781 tgcaacatat cgatattcgt ggagcaagaa cacacaactt aaaaaacatc aatttaacct
      841 tgccgagaga taaattcatt gtaattaccg ggctttccgg ctcgggcaaa tcgtctctgg
      901 cgtttgatac gctctatgcg gaaggacaac gccgttatgt agaatcactg tctgcatacg
      961 cccgccagtt tctctcctta atggaaaagc ctgatgtgga tcatattgaa gggctttccc
     1021 ctgcgatttc gattgagcaa aaatcaacct ctcacaaccc acgttcgacc gtaggaacgg
     1081 taacggaaat tcacgactat ttacgtttat tgtttgctcg agtgggcgag cctcgttgcc
     1141 ctgaccacga tgtgccattg gctgctcaaa ctatttcgca gatggtggat cgagtattgg
     1201 aagaaccgga aggaaaacgg ttgatgctac ttgcccctgt ggtgaaagag cgtaaaggcg
     1261 aacacgtaaa attattggaa aatttgaccg ctagtggcta tttgcgggct agaattgacg
     1321 gtgaaatttg cgatttatcc gacccaccgg cattagaatt acagaaaaaa cacaccattg
     1381 aagtggtggt ggatcgcttt aaagtaaggg ctgatctagc cacccgtttg gcggaatctt
     1441 ttgaaacagc gttagattta tccggctcta ccgcaattat tgcagatatg gacgacccaa
     1501 atgccgaaga aattgtgttt tcgtccagct ttgcttgtcc gcattgtggt tactctttac
     1561 acgaattaga accacgcctt ttctcgttta acaacccggc aggtgcttgc ccgacttgtg
     1621 atggtttggg cgttgagcag ttttttgatg ccaaaaaagt agtgcaaaat gaagaggttt
     1681 cattagccgc cggtgcgatc aaaggctggg atcgccgcag tttctactat tttggcttat
     1741 taaaagccgt tgccgagcat tatggctttg atttagaaac cccattcggg cagctaccga
     1801 aaaaatatca aaacattatt ttaaacggca ctaaagaaga gattgagttt gtttatgtca
     1861 atgaccgagg cgataaggtc aaacgtaaac acgcttttga aggggtgctg aataatatgg
     1921 ctcgccgcta taaagaaacc gaatcaaact cggtgcgtga agagttggcg aagtatatta
     1981 ataatcgtcc ttgtatggat tgcgaaggct cacggttacg ccgtgaagcc cgttatgtat
     2041 tcttagataa aaccaatttg ccgatggttt cggaaaaaag tatcggcgag gcattaacct
     2101 tttttgaaga gctgaaatta gccggtcaga aagaaaaaat tgctgagaaa atcctcaaag
     2161 aaattcgtga acggctacag tttttagtga atgtcggctt gaattatctt tctctttccc
     2221 gctcggcaga aaccctttca ggtggcgagg ctcagcggat tcgccttgcc agccaaattg
     2281 gtgcgggttt agtaggggta atgtatgtgc tggatgagcc ttccatcggc ttgcaccaac
     2341 gagacaatga acgcctactg aatactttgg tgcatttacg caatttaggc aataccgtga
     2401 ttgtggttga acacgatgaa gatgcgatcc gagccgcaga tcatatcgtg gatataggcc
     2461 cgggtgccgg tgtacacggt gggcaagtta tcgcacaagg tacggcagct gaaattatgc
     2521 aaattgagga atctattacc ggacaattcc tctcaggcaa gcaaaaaatt gagattccgg
     2581 ctcagcgtgt gccttatgag ccaactaaat tgctcacctt atcgggagca agtggtaaca
     2641 acttgaaaaa agtgaaatta gagattccgg ttggtttatt tacttgtatc acgggtgtat
     2701 caggttcggg caaatcaact ttagttaatg acacactatt ccctctggca cagaatgcgt
     2761 taaaccgagc ggaaaacagc gatgttgctc cttatgaatc gattgacggc ttatcgcatt
     2821 ttgacaaggt aattgatatt gaccaaagcc cgattgggag aactcctcgc tcaaatccgg
     2881 caacttacac cggattattt acgccaattc gtgagatttt tgccggcacg caagaagctc
     2941 gagccagagg gtataacgta gggcggttta gctttaatgt gcggggcgga cgttgcgaag
     3001 cctgtcaagg tgacggcgtg attaaagttg aaatgcactt cttgcctgat gtgtatgtgc
     3061 cttgcgatca ctgtaaaggc aaacgctata accgtgaaac cttggaaatt cgctataaag
     3121 gcaaaactat tcaccaagtg ttagagatga cggtggaaga ggcgagagaa ttttttgccc
     3181 ctatgccgat gattgcccgc aagttgcaaa ccttgatgga cgtggggtta tcttatatcc
     3241 gtttagggca atcttctact acgctctcag gcggtgaagc ccaacgggtg aaattggcga
     3301 ccgagctttc caaacgagac accggcaaaa cgctctatat tttagatgaa ccgaccaccg
     3361 gcttgcattt tgccgatatt aaacagttac tcggcgtgct acatcgcctg cgtgatcaag
     3421 gcaatacgat tgtggtgatc gaacataatt tagatgtgat taaaaccgca gactggattg
     3481 tcgatcttgg ccctgaaggt ggcagtggcg gcggtgaaat tattgctacc ggcacaccgg
     3541 aagaagtggc aaaagacaaa cgttctcaca ccgcacgctt cttaaaagag attttggcta
     3601 aaggctaacg ttcaacacaa gcggtcatat tttcggaaaa tgttgcaatt tgcaaaaagt
     3661 tggaaaatat gaccgcttgt tttatatccg gagttattcc tagttagcct gtctgatttt
     3721 gtcgaaggca gattcaagat cgctactgaa ttgaatttgc gggatttcgt ttaccgtttt
     3781 ttgtgagcgg actagcattc tcatcggctg aaattgcaca ttacagagat gaagttgttg
     3841 atgtggcaac atatgctgta caaagcgggt tagggcgtga atgccaccag catctaatac
     3901 tgtaacggca tcgcattgca gcacaatatg tttaatttgg tgatcggtat gtacggtttt
     3961 attgtgcaga tcggcaaaga gattatcggc ggcagcaaaa aataacggac cgctgatccg
     4021 ataaaccaac acatcgttca aatcggttgg gtgagccatt tcaaaggatt tagtcatttc
     4081 tgcaatagta cggataaata gcaggcttgc cagtaacacc cctaccgtaa tggcaattac
     4141 catatcaaat aataccgtga gggtaatgca agtcagtaaa accgcaattt catttttacc
     4201 tgaacggcgg gtaagttgaa tgatttgtgg aatatctgcc atattccaag ctactaccaa
     4261 taatagtgca gccattgagg aaagaggcaa ataggaaagt gctttagcca aaaagagtag
     4321 ggcaaataaa accaacaagg cgtgaaccac actagaaatg ggggaaactg ccccggaacg
     4381 aacattggca gccgatctcg caatcgctgc tgtggcggta attcccccta aaaatggcga
     4441 ggcaatatta cctaagcctt gggctaatag ttcgttgtta gagtggtgct tggtatctgt
     4501 catattatcg cacactaccg cacataataa cgattcgata gccccaagca ttgccattga
     4561 aaaggcagcc ggtaataagg cttgaatggt ggttaagttc caatctatcc gattcccctc
     4621 tgcattcggg agattccaag gtaacacaaa ttcaggtaat acgcttggga taccataccc
     4681 agtggtgccg tcagagagcg tgtagtggaa tgctgagccg atagtggcaa cgttttgtcc
     4741 gaaatgaatc agcagtaatg ataacagcgt gccgataaag acggcgggta aatgcccggg
     4801 aataggcaac cgtagcttgt gccaacgagt taaaaccaac aatgttacga cacccactaa
     4861 ggtgtcagcc caatttatgg ttggcaatgc tgaaaaaata gcctctagct tgccaagata
     4921 gtgttcaggc attttttcaa tgcttaagcc cagaaaatct ttgatttgca aggtggcgat
     4981 cacaataccg atgccacagg taaaacccag tgtgacaggt agaggaatgt attcaattaa
     5041 gcgtcctaat cggagtaacg ccatcaatac taaaattcct ccggaaagca ttgttgccat
     5101 gagtaatcca cttaagccaa actgctgcgt gacggggtat agaatcacca caaaagcggc
     5161 tgttgggcct gaaatattaa atcttgaacc gcctgttagg gcaatcacaa tcccggcaac
     5221 aatcgccgta tataaaccgt gctgtggtgg cacaccgctg gcaatcgcca acgccataga
     5281 taacggaata gcaataacgc caacggttaa gcctgaaata atatctctga ttaaatgttg
     5341 tttaccataa cctgcattga gagcatcttt taatgcacta aaaggcttga cggcaagaaa
     5401 agcattttta gttaaaaacc atttatttaa catagaatgt tcgagtgaag agaatgtttc
     5461 gcttatttta ctgcaatgaa taaaattaaa tttgagctaa cgcaagaaaa agcaggaaag
     5521 acgaaatatg ttggagacaa gcggttgttt taggcgaaaa atttgcaaat acaaataatt
     5581 agctgatttt attttgaaaa tagcgtaaaa tgccacttta atttgtacta ctatagtagt
     5641 gcatttgtgt gatttcatta actataataa acaaatggac agtcttattc attttttgag
     5701 tgccttttta actaatatca cttggattgg ggcgttagag ctggggttaa tttattccct
     5761 tgttgccctt ggggtattaa tttcttataa aattctggat tttccggatc tgaccgcaga
     5821 cggcagtttc cctttaggag gggcggtgtg tgtgatcagc attttgaatc aagttgatcc
     5881 ttggctggca actttatacg gcacgcttgc cggagcagta gccggtatgg ttactgcaag
     5941 tttgcatatc ggctttaaaa tcgaaaaatt gcttgccagt attttaatga tgatcgcact
     6001 ctattcgatt aatctacgca ttatgggaat gccgaatatt gctattttag gcgaaaccac
     6061 gatttacgat gtaatgccga ttgaaagcga tctacagtta gccttagtac gattagtgat
     6121 ggcattgctg gttgttatta tcgtaaaagg tttgtttgac ctcttttttg cgaccgaaat
     6181 cggtttggct gtgcgggcaa ccggtactaa tagtcgaatg gcgaaagcac agggtattgc
     6241 gattaataaa atgacgattt tagggatggc gatttctaat gcgttaattg ccttaggtgg
     6301 tgctttgtat gtgcaaagca acggtggtgt agatatttcg attggggtag gaactatcgt
     6361 gattggcttg gcggcggtaa ttatcgggga agcaattttt tcggtaaaac ggattatttg
     6421 gcttaccttt gcggtgatta ttggctcaat tctttatcgt ttcttcatcg cactagcatt
     6481 aaataacgaa actttaaacg gcattggctt tggcccgcaa gatctgaatt taattacggc
     6541 gttattggtg gtgattgtat tagcggttcc tcgaattaaa cacaaattgc tcggtaagcg
     6601 aggttaatat gattgaactc aataacttat ttattacctt caacaaaggg acagcaattg
     6661 agaaccctgt gctgagaggc ttatccctaa aagttgagca aggcgaattt gtgtcggtaa
     6721 ttggtagcaa tggggcgggt aaatctacct tattaaatgc gatcagtggt gattgtgcgg
     6781 tggactccgg tgagatttta attcaaggaa ataaggtaaa ccaatccacc acttggcaac
     6841 gggcaaatca agtcgcccga gttttccaag acccgatggc tggcacttgt gaaagtttaa
     6901 cgattgaaga aaatatggca ctggcttacc aacgtggacg taaacgtggg ttgggctttg
     6961 cgatcaaacg ccaaatgcga gagttattca aagacaaact tgctttgtta gggctaggtt
     7021 tggaaaatcg gcttactgat caaatggggc gtttatcagg cgggcaacgc caagcggtga
     7081 gcttgctgat ggcatcactt cagccgtcta atatcttatt gttagatgaa cacaccgcgg
     7141 cactggatcc gaaaaccacc gattttgtgc ttgaacttac caataaaatt gtaagagaac
     7201 agaaattaac cacgctaatg gtaacgcatt caatgcggca agcccttgac tatggcgata
     7261 gaaccgtgat gttacaccaa gggcaagtgg cgtttgatgt ttcgggcgag caacggcaaa
     7321 aaatggacgt gccggatctg ttacaacttt tccaacaaag tcgccacgag cagttgagtg
     7381 acgatggatt attactcggc aattaatttt gcgatctgca tcgaaaaaat gaatttctcc
     7441 ttttgttttt ggctgtcaaa ttttaaataa taagcccaaa aggaggtatt caatgttaag
     7501 cattttcaaa acaccggtag agaaagaaac gctagacgat tgggctaaaa tttcggttga
     7561 tgtagcgaaa gttgcgattt tggcaattcc tgttatactt tttggcaaag aaccaacgtt
     7621 gattaaattg actaacttag cattattggt attgagtatt tatgtttttt tgacgcttgg
     7681 gcgaaaatta cggcagctaa aggaggtgtt gtgatggaac taggctggaa tttaaccata
     7741 ggtttgctaa ttttaaacgt ctttgcgttt gcttggcttt atattattaa ccggatttct
     7801 aaagaacaat tatccaaaaa tcaataatat ttaatttttc acaagcggtt gtttttgcaa
     7861 aatattttgt aaattcgacc gcttgcctgt ttttaaatga caaaatacga cgataaaatt
     7921 cagcatgcat ttagcgaaaa tgggttgctc agccaaaata tcagtggatt tcgaccacgc
     7981 caagcacagc ttgaaatggc tcaagtggtc gcaaaagcag taaaatttgc gacacctgtt
     8041 gtggtagagg cgggaaccgg cacaggcaaa acctttgctt atcttgtgcc ggcactactt
     8101 tcaggcaaga aaactattct ttcgacaggt tctaaaaacc tgcaagatca actttttaat
     8161 cgagatcttc ccactattca aaaagccctg aaatacaaag gcaaaattgc gttactcaaa
     8221 gggcgtgcga actatttgtg tttagagcgt ttagatcaag tgaccgcaat gggcgtactt
     8281 ggggataaat ccgttcttac cgatttaaaa aaagtcagta aatggcaaaa tgccactaaa
     8341 acaggggatt taagtgaatg tattaccatt gccgaagata gcccgattct accgcagtta
     8401 gttagcacca ccgagagttg cttaggctcg gactgcccgc attttaaaga ttgttatgtg
     8461 gtacaagccc gccgtaaagc gatggaggca gacgtagtgg tggtaaacca tcacctattc
     8521 tgtgctgata tggcagtaaa aaagaccggt tttggtgagt tgatccctga agctgagctg
     8581 gtgatctttg atgaagctca ccaactgccg gatattgcca gccaatattt tgggcaatcg
     8641 ctttcttccc gccagttatt tgatatttgt aaggatacca atattgttta ccgcactgaa
     8701 ctcaaagatc tgtctcaatt aggcaaagcg gctgatcact tgacgaaagt agtgcaagat
     8761 ttccgattat tgatgggcgg agaagggcag attcgaggca atttgcgaga gttatttcgt
     8821 gataaaaaag tggtcgatgg cttggtaaaa gtggctgaaa atattgattt tttaagtgaa
     8881 gtggcgaaaa aatcgctggg gcggtcggaa acgttggata aaattttcga gcggttagca
     8941 gaagttaagg ttcaacttaa aaaattaatg gatactagtg tgacaggcta ttgttactgg
     9001 tatgaggcga atggacgatc ctttgggctg catattacgc cgcttatggt ggcagataaa
     9061 tttggtgaac agttgaagaa ccagcaaatt ggttgggtgt ttacctcagc cacactcgaa
     9121 gttgggggca aattcgatca tttttgtcaa cggctgggca tcgaaaatgc ggagcagttg
     9181 gtgttacaaa gtccgtttga ttaccaacat caatctttac tctgtgtgcc ccgctacttg
     9241 ccggatacca ataaatccaa tactttaact gctctcgggc aattattaaa accggtgatt
     9301 gaggcgaata aagggcgttg tttcttgctt tgtacttcct attatatgat gcgaggttta
     9361 gccgactttt tacgcgaaca cagttcgctg aatgtgttat tgcaaggcga aaccagcaaa
     9421 agccgtttat tggaaaaatt tgtgaaagaa gatcacagcg tgttggtggc gacccaaagt
     9481 ttttgggagg ggattgatgt gcgaggcgat gatttatcgt tggtgattat tgataaattg
     9541 ccgttcactt caccggacga accattactc aaagcccgaa tggaagattg taagatacag
     9601 ggcggtgatc cgtttaacga tattcaaatt cccgaagcgg tgattaccct caaacaaggt
     9661 gtagggcgtt taattcgtga tgtgaccgat agaggtgtag tgattatttg tgattcccgt
     9721 ttggtgatgc gaaattatgg gcaaactttc ttgaaaagtt taccgccgtc tagacgcact
     9781 agagatttgg ggaatgttat tcaatttttg aaacaaaaat agggttacaa gcggtcagat
     9841 ttctgcagat ttttgcaaaa aaacggataa aaataaccgc ttgttgagga gttatatgtt
     9901 gtctacattg ctgcgtatgg ttgcttcttt ggcattgtta tttgtgatgc tttatttagg
     9961 caagttaatc gtttatctat tccccatcgg gatcccggat agtattttag gtatgcttat
    10021 cttattcggc tgcttggtta tcggcattgt taaagtggaa tgggtgatac cgagcgcgaa
    10081 accgctcaca cgttatataa cactattttt ccttccgatt tgtgtcgaac tcatcgaaca
    10141 tcttgagctg ttacgccaaa atctgaacac ttttgtatta gcaacggcat taagcacctt
    10201 agtttctgtg gtcgcgattg gcgtgtttgc acagtggatt tttcattaca agagagggta
    10261 aaatgagcta tctttacact gtgttgacgg taatcatgtt tattgccggt ttgaaaatca
    10321 gccaaaaact caagagcagt tttctgaacc ctttcttaat tgcactcgct ttgctaattg
    10381 gtgtattact gatttttaat atcccttacc aagactatta tcaaggtaat tcccccttga
    10441 ataacttact tggcgtttct gttgtggcac ttgcttaccc tttttatgaa caattacccc
    10501 atatccgtaa aaaatggcga cagattgtcg tgattttgct gtttagtacc atcattacga
    10561 tgataaccgg gcttgggttt tcattattat ttggggcaag ccaagagatc ttagccgcca
    10621 ttttgcctaa atcggtatca atgccaatgg caattattat tacgaatgaa attaatggaa
    10681 atgttgcaat cgcagcggtt ggggtgatga tcgcaggctt agtgggatct attttaggct
    10741 ttacgcttct gcgcctggca aaagtaagaa atgtgatggt gattgggtta agtatgggag
    10801 ctgcttccca cgcattaggc acggcaagat gcttagagca tagtatgaaa gccggtagct
    10861 atagttctat cgcattagtg gcttgtggtg tgctgtcttc tatatttgca cctttaatat
    10921 ttaacgttat cgtcacgtta tgttactaaa aacagtgaaa tctcaaacct tatttggtaa
    10981 ctggctgaaa tcaaggtaca ataccgtgat ttttcaatga aaatagagaa ttatgcaaga
    11041 acaaataaca caagaaaaag atctttctac gcttaaaacc tttaagcgtt tatggccgac
    11101 tatcagcccg tttaaagcgg gtctgattac aggtgctgtc gctttagtat taaatgcgtt
    11161 agtggattct agtcttatct atctcctcaa acccttgcta gatgaaggct ttgggcaagc
    11221 taataatgat tttctgaaat tgatggcggt gcttgtagta gtttttattt tagtgcgcgg
    11281 tattaccaat tatattgcca gttactgttt agcttgggtg tcaggcaagg tggtaatgac
    11341 attacgccgc catatttttc aacatttaat gtatatgccg gtaagctatt ttgataacaa
    11401 cccgaccggg cgtttgctct cacgagtgac ttacgatacc gaaatggtgg cgagttctgc
    11461 ttctcattct ttagtgacta ttgtgcgtga aggggcttat ctgctgtcat tgtttgtggt
    11521 gatgatctat accagttggc agctttctat tgtgttattt gtgatggctc ctatcattgg
    11581 ggtactgatc agtttcgttt caaaatattt tcgtcaatta agtcgcaata tccaaagttc
    11641 aatgggggag cttactgtca cgacagaaca aatgcttaaa gggcataagg ttgtactttc
    11701 ctttggtggg caggaaattg agaaagcacg ttttgatcga gtcagtaatg atatgcgtcg
    11761 taaagggatg aaagtcgttt ctgctgatgg catttctgat ggtgtggtac agcttatcgc
    11821 ctcttttgcg ttatctgctg tgctttatgt tgcgaccttc cccgaggtga tgagtgagaa
    11881 tttaaccgca ggttcattca cagtagtgtt ttcttcgatg atggcaatgt tacgtcctct
    11941 aaaatcactc accaatgtga actcgcaatt ccaacgtgga atggcagcct gccaaacgtt
    12001 atttgaattt ttagatttaa aaactgaaaa agatcacggc ttaatctccg ttgctaaagc
    12061 tgaaggcaat gtggaattta aaaaggtaag ctttagttat gaaggtaaag aggaaaaagc
    12121 actcgataat atttctttca ccattcctaa aggcaaaaca gtagcattgg ttgggcgttc
    12181 cggctcgggt aaatcaacta ttgccaattt gcttacccgt ttttatgatg tgactgacgg
    12241 tcaaattttg cttgatggaa ttaatattca agattaccgc ttaaaaaact taagagaaca
    12301 atgctcggtg gtttctcaac aagttcattt gtttaacgat actattgcta ataatattgc
    12361 ttatgctgca atcgacaaat acagccgaga agaaattatt gctgctgcaa aagctgcaca
    12421 cgcaatggaa tttatcgaaa aattggaaaa tggcttagac actgtaattg gtgaaaatgg
    12481 cgcaagtctt tccggtgggc aacgccaacg cttggcaatc gctcgtgcat tactgcgaaa
    12541 ttctcctgtg cttgtgctgg atgaagctac ctctgcatta gatacggagt cagaaagagc
    12601 gatccaatct gcacttgaag tgctacagaa agatcgtacg gtgttggtca tagcacaccg
    12661 gttatcaacg attgaaaaag ccgatgaaat tttggtagtc gatcacggaa atattattga
    12721 gcgtggcagc catacggaat tgttagcaca aggtggggct tataaacaac tccatagttt
    12781 acaattcgga gcctaatttg taggggagaa atatgtttct ccccaattaa tgataaaaac
    12841 agggcgaaaa atatttcgtc cctacaataa tttatttgga tactatgaaa aaactgacaa
    12901 aacttttatc tcttagtgct ttactggtct taaccgcctg taattcggta ctaaatgcct
    12961 caacagaggt gcaacaacca acagtacaaa ttccgcatga cgatccacaa tggcagcagc
    13021 atttagcgaa actgagccaa attcaaggct atactgcaac ggggcaattt ggctatattt
    13081 cgcctgaaga gcgtttttct tcccatttca actggcgtta tactaatcca atccaatttg
    13141 ggttagagct ttcctcgaat ctctcgacta aatcactgaa attagagcgt aataaacgag
    13201 gcttaacggt ttcggacaat gagggtaata gccgttctga ccgtgatgtt gatgcgttaa
    13261 tgcaagagat tatcggtgtt tcgtttccta tcgatcagtt tgcctattgg gtaaaaggct
    13321 tgcctgaaaa agatggcaac tatattgtga atgaaaaacg ccagctgtcg caatttagtt
    13381 atccgcttaa tggcacgctt tggaaagcaa gctatgtgga gtatcacgaa gatcgtgtac
    13441 caaacttacc gaagctgatt gtgcttgaaa acggcactca aacgttgaag atccgcattg
    13501 aaaaatgggc gtattaatga agaaagtcac cttacccagc ccggcaaaat taaacctgtt
    13561 tttatacatt accaataagc gggcagacgg ttatcacgag ctacaaacgc tgtttcagtt
    13621 tttagatttt ggtgatgaaa ttgagattga gatcacagaa agttcagagg ttgaattaat
    13681 taatccggta gaaggggtgg caactgagga gaatctcatt taccgagcag caaaactttt
    13741 gcaaaaaacg accgcttgta ggcaaggctg ccgtattggg attaaaaaaa acctaccgat
    13801 gggcggaggt gttggtggtg gatcttctaa tgctgcaaca gtattagtcg gtttaaatca
    13861 cttgtggaat accgagcttt cattggaaaa attggcagaa ttaggcttaa gtttaggggc
    13921 tgatgtgccg atatttgtta gaggtatggc tgcttttgcc gaaggcgtgg gggaggtgtt
    13981 aactccttgt gatccacaag aaaaatggta tgtagtgcta aaaccagaag tgtcgatttc
    14041 aaccgcagcg gtgtttaccg acccgaattt acctagaaat acgccaaaac gccccttagc
    14101 cgaattatta tctttaccgt gggaaaacga ttgcgaaaaa gttgtacgag aaaagtattc
    14161 tgcggttgaa gatcttatac aagaattgtt acaatatgct cagtttaggc taacaggcac
    14221 aggtgcttgt attttcgccg aatttgaaac aaaagcagaa gccgagcagg tttttgcaca
    14281 taaaccggaa gccgtcttcg gttttgtggc gaaagggcaa aatatttcgc cattacatca
    14341 aatgttattc caaatctaac catcttaacc ttaaggatca atccatgaca gatattaaac
    14401 tgtttgcggg caacgcaact ccggaacttg ctaatcgtat tgcaaaacat ctttatacct
    14461 cattaggtaa tgcaacagtt ggtcgtttta gcgatggtga aattcaagta caaatcaatg
    14521 aaaatgtgcg tggaggcgat atttttattg tgcaatccac ttgtgcacca actaatgata
    14581 atttaatgga attgatcgtg atggtagatg cgcttcgccg tgcatcagct ggtcgtatta
    14641 ccgcagtgat tccgtatttc ggttatgcac gccaagacag acgcgtgcgt tcggcccgtg
    14701 tgccaattac cgcaaaagtg attgctgatt tcttatccag cgtaggggta gatagagtct
    14761 taacctgcga cttacacgca gagcaaattc aaggtttctt tgatgtgccg gtagataacg
    14821 tatttggttc ccctgtgtta atcgatgata ttttgaaaaa atccgatttg gtcaacccta
    14881 tcgtggtttc tccagatatt ggtggggttg ttcgtgcaag agcggtggca aaattattaa
    14941 atgataccga tatggcaatt attgataaac gtcgtccaaa agcgaatgta tcacaggtaa
    15001 tgcacattat cggtgatgtg gctgatcgtg actgtatttt agttgatgat atgatcgata
    15061 ctggtggtac tttagtcaaa gcggctgaag cgctgaaaga acgtggcgcc cgtcgtgtct
    15121 ttgcttatgc cacacacgcg gtattttcag gcacagcagc tcaaaattta gcgaatcctg
    15181 ctttagatga aattgtagta actgatacta ttccactgag taatgagatt aaagcattaa
    15241 ataaagtacg tgttttaaca ttatccggta tgttagcaga agcaattcgc cgtattagca
    15301 atgaagaatc catttcagca atgtttgatg cctaatttat gagaaaaaac ccagtcgaaa
    15361 gattgggttt ttcatatctg ttcactacta tatttagttt aagataattt gtatgtattc
    15421 cctgattcgt aaattacttt ttgcactaga tacggaaaaa gcacatcaat tctctattca
    15481 ggcacttgct ttagccggaa aatcgccttt ttcgattctg ccaacacccg ataatccgac
    15541 ccaagtaatg ggactcacgt ttaaaaatcc aatagggctt gcagccggag cggataaaaa
    15601 cggtgaagcg atagatggtt ttgggaaatt aggatttggg tttattgagg ttgggactat
    15661 tactcctctc gctcaagacg gaaaccctaa accgaggcaa tttcgtattg tagatgcaga
    15721 gggaattatt aaccgcaatg gatttaataa taaaggcgtt gatgttttag tagaaaatgt
    15781 aaaaaatgca acctatagtg gtattttagg tattaatatt ggaaaaaatg cggttacacc
    15841 aattgagcat agctttgatg actaccaaat ttgtttgcgt aaggtttacc aatatgctga
    15901 ttatgtggcg gtgaatattt catcacccaa taccaaaaat ttgcgcagtt tacaatatgg
    15961 tgaggcatta gatgatttgc tgcgaaacct caaaaatgag caggcacaac tttcgcaaaa
    16021 aatggggaaa tatcgaccgc ttgttttaaa gattgcgcct gatttaaccg atgaagaaat
    16081 cgtttctgta gccgatagtc ttattcgtta ccaaattgat ggggtgattg ccggcaatac
    16141 taccttgtct cgtgaaagta ttgccggatt accgtattcg gaacaactgg gtggattaag
    16201 tggcaagcca ttacactcat taagtacaag gttaatttca aaattatctg ccgagttggg
    16261 cgagagaata ccaattatag gttgtggggg agtccattcg ttagagagtg ggcaggagaa
    16321 agtgaatgca ggtgctagtt tattgcaagt ctattccgca atgatttacc aaggaccatc
    16381 attaattcaa accttagcca aacaccttca gctgaacagt tagggataga tttctagtta
    16441 aaaatgattg gttaggttta tttctgtcat cttagtggaa tagatggcgg tattagctat
    16501 ctatcaaaaa tagacaa
//
LOCUS       DANLTI010000051        16468 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.051, whole genome shotgun sequence.
ACCESSION   DANLTI010000051 DANLTI010000000
VERSION     DANLTI010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16468
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.051"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..519)
                     /locus_tag="PXB09_001283"
     CDS             complement(<1..519)
                     /locus_tag="PXB09_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5233409.1"
                     /translation="MLDSLKEVNQKLDKKADKVGGGTKEDALVTLDTLIASGTVKAET
                     AMSLLPTLQKGAVATGASSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGSFEL
                     AYMASWLPQQMAAAKQAGLSSIEGFERLLIANQQARVTAGTSDEAGNNLVNLLGKITA
                     KETNERFKNIEYK"
     gene            618..869
                     /locus_tag="PXB09_001284"
     CDS             618..869
                     /locus_tag="PXB09_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5233410.1"
                     /translation="MAPTISDGDQMLVDFSKKEARGDDKIYLVQNGESVWVKRVRKVW
                     DYVELISDNESYRPIRITADEAQNLQIIGQVVHIGHSLV"
     gene            complement(1065..1265)
                     /locus_tag="PXB09_001285"
     CDS             complement(1065..1265)
                     /locus_tag="PXB09_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5233411.1"
                     /translation="MQYVLDLTGYACPLPLLMAKKAMNDLKKGDSLEILLNQQSSLTD
                     FELLAKEQGWLCELQAVENVGY"
     gene            complement(1324..1836)
                     /locus_tag="PXB09_001286"
     CDS             complement(1324..1836)
                     /locus_tag="PXB09_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDL5233412.1"
                     /translation="MQQLEPQTFASWAEPIDMLYACHSKVKSFCKQLQILPDYLEKNG
                     VNQAVKNDVQQILNYFNISAPLHHEDEEDDFFPELIKVQPQAQAEVDELERQHVHLHK
                     NWDYLSAQLEDLLAGKRENVDRDLIERFVAGYDVHIAIEEPLFELGREHLAQDKLSAM
                     GKVMADRRKL"
     gene            complement(1849..3003)
                     /gene="tgt"
                     /locus_tag="PXB09_001287"
     CDS             complement(1849..3003)
                     /gene="tgt"
                     /locus_tag="PXB09_001287"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDL5233413.1"
                     /translation="MKYELKTTSGNARRGRLTFNRPKGEFHVETPAFMPVGTYGTVKG
                     MTPEEVKATGAQILLGNTFHLWLRPGQEVMKMHGDLHDFMQWHGPILTDSGGFQVFSL
                     GKLRKIKEEGVTFQNPISGEKIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK
                     KSMEMSLRWAKRSRDRFDELENPNALFGIIQGGIYEELRKVSVEKLVEIGFDGYAVGG
                     LAVGEPKEDMHRILEYVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNA
                     RNGHLFVTNGIVKIRNAKYRADTTPLDPECDCYTCKNYTKAYLYHLDKCGEILGARLN
                     TIHNLRYYQRLMAEIRQAIEEDRFDDFVVEFYARIGKEVPPLQSEVKEQK"
     gene            complement(3062..3202)
                     /locus_tag="PXB09_001288"
     CDS             complement(3062..3202)
                     /locus_tag="PXB09_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233414.1"
                     /translation="MKKLLLCVGILVLAACSSTGVGGSIGAGGGSNGVGIGLGVGTDF
                     RF"
     gene            3296..3868
                     /locus_tag="PXB09_001289"
     CDS             3296..3868
                     /locus_tag="PXB09_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDL5233415.1"
                     /translation="MKILRKFAAVCVVSMAMLSANANLLTISEQEINDYLATKLAEKI
                     PLKDKVGIPKLFELDYRLHSLTSQIGRTEEKKVAISGVVDGLLNAKGKKYAASIHLNM
                     DTTPYYDPQKGALFLKDVRLLSWSATPAKYQAELQMFLPVLADGLSSFLNSTPVYTLD
                     ENKTKEAMVKKFGKAIVVENGNIKLETTIF"
     gene            3970..4188
                     /gene="cspD"
                     /locus_tag="PXB09_001290"
     CDS             3970..4188
                     /gene="cspD"
                     /locus_tag="PXB09_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein CspD"
                     /protein_id="HDL5233416.1"
                     /translation="MDIGIVKWFNNVKGFGFITSDVCEGDIFAHFSEIQAEGYRSLKV
                     GQKVQFELVQGERGASASNITPISEKTL"
     gene            4278..5192
                     /locus_tag="PXB09_001291"
     CDS             4278..5192
                     /locus_tag="PXB09_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5233417.1"
                     /translation="MPSSYQLVLINLLYIFGIGLNIVLLRFLSLHFDPLNNNGIRFLV
                     GGFTLLFFILWRFRTSLSQLIKTPKLIAISLFVGLMMSANMYFWLKGVKITNAVTVSI
                     FGVLAMPFGVIIAAIFFQDERERIKSKAFWFGSILTIIGSLGFIWHGKTLSIGEGFIL
                     GSVFLFLSIIIRNIQNLVVKFARELNVLTLSCVTSLTTSLSSLLLSQQAGKFNELFTA
                     PNWLLFSLMVAGIYAIMIGMVLTFHIIQTQGLITYQVLELLMPVSTAIIAYILLDERI
                     SIVQMGFACIVILGSSIALKLVKYPKHY"
     gene            5311..6171
                     /gene="araC"
                     /locus_tag="PXB09_001292"
     CDS             5311..6171
                     /gene="araC"
                     /locus_tag="PXB09_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDL5233418.1"
                     /translation="MYKNLSLLSPTYPFDLEFIAGLTQCEKGNYLDSIVDRQQGMHGY
                     MLQLTTFGRGSVFDGKHVFTAHRGQLLLFTPNAVQHYHRHPESQYWHYKWVYFQPNPK
                     WNKWLNWSDMEEKIGRITISDDRYFQEISQLFSKIELELKSSKFFKEDIATSLLEYLL
                     MKCISAEKIEVIPVIDQRILTVCDLILTNLAKNESLEAMAEKVFLSPSRLSHLFKQSL
                     GISLVQWRELQRISESKKLLYFSNISISNIAKSLGYEDSLYFSKIFKKHTGLSPSEFR
                     TLERRKDSEM"
     gene            6358..7332
                     /locus_tag="PXB09_001293"
     CDS             6358..7332
                     /locus_tag="PXB09_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5233419.1"
                     /translation="MKKPTFKHALFSSILALACYGSAFANDVVNISKIDGMPWFNRMA
                     EGVVQAGKDNNINAYQVGPSNTDAPQQVKLIEDLIAKKVSAISIVPNDANALEPVLKK
                     AKQNGIVVLTNESVGQPSADWDIEIIDNAQFAADYVEEVAKAMGGKGGYVIYVGGLTV
                     PQHNLWADLFVKYQKEHYPDMFEVTSRMPVAENINDARRTTIDLVKAHSDLKAVVSFG
                     SQGPIGAGLAVKEKRLKNKLNVFGMMIPSQAANLIKSGDITMGITYDPANAGYALAAV
                     AAKVLKGEKIEDGLEIPTVGKAKVDSEKKLLQFHNVLKVTKENIDKLY"
     gene            7387..8877
                     /locus_tag="PXB09_001294"
     CDS             7387..8877
                     /locus_tag="PXB09_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5233420.1"
                     /translation="MAFISMRHISKTFHGIKALNQVNLSLDYGEALCLAGQNGCGKST
                     LIKILSGVYQPDKGAEIQIGATQYTKLTPQESIDKGIQVIYQDLALFPNLTVAENIAI
                     NLHRKFGWVSQDHIHQVALTAIQSINANLDLNAILEDLPIAQQQLVAICRALAQNARL
                     LIMDEPTASLTAKEVKDLLDVVIKLKSKGISIIFVSHKLQEVMSVSDSVLVLKDGNMV
                     GQYPIREMNEKRLGFLMTGLEIDYKRLDLPDFLQRKTVLEVRNLTLPHQYQEINFSLR
                     EGEIVALTGLLGSGRTELCLSLFGITQPQSGDILLNGEKVIFNTNRDAIAKGIAYVSE
                     DRMHTGLIMAESIHHNIISTIFHKITDKLQIIQSSKAYASSQALIDSLKIKVSDSDLP
                     VNTLSGGNAQRVSIAKWLAIDPKIIILDAPTIGVDIANKEGIFQIIKSLAQQGIAVIF
                     VTDEVEETYYNSHRVIVMKKGRIVDEILPAYSSEKSIAEVIYENQQ"
     gene            8861..9820
                     /locus_tag="PXB09_001295"
     CDS             8861..9820
                     /locus_tag="PXB09_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233421.1"
                     /translation="MKISNNHILSSTLLILILLLTLFTRDFATIENLYDVVNNYAMLM
                     ILACGLFVVLLSGGIDISFPAITIISQYVMVTLIGKYDVGFAGVFVISSTIGILLGFI
                     NALFVNRLSVPSIIITISTLNIFYGGLLYFTKGVWLYEYPEWFTQEIVFFKQITAEGV
                     EFGLSFQALMAILAVILTGLITNKLTIGRKIYALGGNPDATSRIGFNLLFLHLFAYGY
                     MGFMAGLAGIVQSYTVQSVAPDSLLGYELTVLAAVVLGGASLSGGRGTLLGTVMGVML
                     LAIIQNGLNLMNVSSYWQTIITGIIIILSISATALSQRKKQGA"
     gene            9823..10773
                     /locus_tag="PXB09_001296"
     CDS             9823..10773
                     /locus_tag="PXB09_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233422.1"
                     /translation="MKSKLDPTIFYLLALFAVAVIAFSIFIPDIFWSVSNFQSMASQI
                     PVLGILTLAMALPMLTGGINLSIIAGMNACSLIIAYFITQYTGISWLFIAILLSLCCA
                     LAIGLLNGTLIAIIRVSPILATLGTMTLINGINILVTNGSTIANFPETMLSINASAFL
                     WIPLPILIFLFLAGLIWFFLEKTAMGKAVYFIGNNEKATYYSGINTKKVLIWVYVISS
                     ILCVFAAILMMSKLNSAKASYGDSYLLISILAAVLGGINPDGGKGKLLGIMLALVLLQ
                     VIESGLNMLGISSYITMILWGSLLLFFIFLQKNRLFRLTQ"
     gene            10786..12381
                     /locus_tag="PXB09_001297"
     CDS             10786..12381
                     /locus_tag="PXB09_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HDL5233423.1"
                     /translation="MQNEKQLIEQGNTVIGIELGSTRIKAVLISSDGTILATGGADWE
                     NRLIDGIWTYHQNEIWEKLQAAYMDLSKTVKEKYHTTIRTAKALGISAMMHGYLPFDK
                     HGNPLVAFRTWRNNITLTSSEKLTALFQYPIPQRWSIAHLHQALLNQEPHLPEIDYLT
                     TLSGYVHWQLTDHKVLGIGDASGMFPIDTELKSYNPTMLAQFDRAIADYRMPWKLEAI
                     LPQVRVAGEQAGKLTEKGAKLLDPTDNLQAGIPLCPPEGDAGTGMIATNCIKEKTGNI
                     SAGTSAFAMIVLEKALSKAYSELDIVTTPAGKLVAMAHANNCTSDINAWVNLFGECLS
                     VFGVNICTEELYEMLFLHALQGDADCGGLLSYGFHSGEHNVGLSEGCPVFLHPTNAHF
                     NLANFMRTHLYTAFGAMKLGMDILINQEKVEISRILGHGGIFKTEGVAQKILSSALNI
                     PLATASTASNGGAWGIALLADFLSVSDRYSLEEYLDNCIFNTTKLNLVQPDKTMSEGY
                     ERFMQRYKQGIPVVEKALFLNTD"
     gene            12611..13813
                     /gene="yedE"
                     /locus_tag="PXB09_001298"
                     /pseudo
     CDS             12611..13813
                     /gene="yedE"
                     /locus_tag="PXB09_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005824242.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
     gene            13849..14118
                     /gene="yedF"
                     /locus_tag="PXB09_001299"
     CDS             13849..14118
                     /gene="yedF"
                     /locus_tag="PXB09_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDL5233424.1"
                     /translation="MAFTVVQKLDKDPKDITPDYTLDTLGEPCPYPAITMLETMPQLQ
                     KGEILELLSDCSQSINNIPIDTKNHGYTLLSVEQNGTKLRYLIQR"
     gene            14218..14562
                     /locus_tag="PXB09_001300"
     CDS             14218..14562
                     /locus_tag="PXB09_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDL5233425.1"
                     /translation="MNKYALLAIFWFIIGIYALLFRESTNDIPPFPHFDKVSHFALFF
                     IQIWLSANAFIRSKKGIPYFGLIIFALLYAFTSEWAQATFTSTREGSWLDGLADMLGA
                     SLSLLLVKYCKK"
     gene            complement(14625..15572)
                     /locus_tag="PXB09_001301"
     CDS             complement(14625..15572)
                     /locus_tag="PXB09_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDL5233426.1"
                     /translation="MNRITQILNIKHPIVQAPMSWLTDAHLVASVAEAGGLGFLAPHA
                     GQTTNPTSNEEVLDRMRNEIRKVKALTDKPFGVPFILSYDFSLIPLMVDLFIEERVPV
                     VLDNGWLDPEIYAKFKAAGIKIICRLPNPNLADALKAQALGADILVLTGFDEGGTLPM
                     KEVGSFNVLAEFVGKVDLPIMLAGGIADKKAVQAALTLGAEGVWIGTAFIATEECRAS
                     EKVKNWIVEANANDLLLFRTEPHYYRSLPTGLAKKCFEMSENGATRSEIAKVMNAGTG
                     MRLGMLEGDFDNGYVSVGNGISQINKIKSVKELIDELMA"
     gene            15755..>16468
                     /locus_tag="PXB09_001302"
     CDS             15755..>16468
                     /locus_tag="PXB09_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233427.1"
                     /translation="MSIRWENIKPLQGSQNSAFEELVCQLARQEFKSQGKFTRISAPD
                     GGIEAMCELPDGSVCGWQAKYFLSSFSSSQWQQIEDSFKESLKNYPKLTKYYVCVATD
                     RANANVSGKKSFLTKWEEYTQRWKDFAQSQGREIEFEFWGSFELSDLLSKPENAGKKF
                     FWFNESELSDKWFEQYNQQAINNLGVRYTPEINVDLPIAMQLESLARTQIFKKHLSDE
                     FHKLLVEIKSQYKSLYRYEA"
BASE COUNT         4837 a         3321 c         3191 g         5119 t
ORIGIN      
        1 tttatattca atatttttaa aacgctcatt tgtttcttta gctgtaatct taccaagcag
       61 atttaccaga ttattacctg cctcatcgct tgtaccggca gtgacacgag cctgttggtt
      121 tgcaattaaa agtcgctcaa agccctcaat actactcaaa ccggcttgtt ttgcagctgc
      181 catttgttga ggcaaccaac ttgccatata tgcaagctca aaactacctg cttgcccggc
      241 tgcaacagcc atatccaatg cccgcccaat atcctcttct ttgatgccaa attgttgcat
      301 agaggagatc gcaatttttg ccatatcctc cgagcttgcc cctgttgcca ccgccccttt
      361 ctgcaaagta ggtaatagac tcattgcggt ttcggctttg actgtaccgg aggcaatgag
      421 cgtatcaagc gtaactaacg catcctcttt tgtgccaccc ccaaccttat ccgccttttt
      481 atcaagtttt tggtttactt ctttgagcga gtctaaaata tcgtccagct tttccttaag
      541 agccttattc agacagccta ttaagcctag gcgtaaaagc ccataattgt ggcgtatttt
      601 gggctaatgg cacatcaatg gccccgacta tcagcgatgg tgatcaaatg ttagtggatt
      661 tcagcaaaaa agaagcccgt ggagacgata agatttatct tgtgcaaaat ggtgaaagcg
      721 tttgggtaaa acgtgtaaga aaagtgtggg actacgttga attgattagc gataatgagt
      781 cctaccgccc aatccgaatt acagcagacg aagctcaaaa cttacaaatc atcgggcagg
      841 tagtccacat cggacactct ttagtttaaa acagatttaa aatagtttta aaaccgatca
      901 aacctatgca aaaaatatcg caaaaactgc ccattttttt ctaatcctgc tcattttgtt
      961 ttttgcatag ccccaaccaa acaataacgg cgaacccttg tattcacggg gctcgccgtt
     1021 atttttccgc ccaaattttt ttctttctct ctatgcaaaa aagatcagta ccccacattt
     1081 tcaaccgctt gtagctcaca aagccaacct tgctctttgg caagcagttc aaaatcggta
     1141 aggctactct gctgattgag taaaatttcc aagctatcgc cctttttaag atcgttcatc
     1201 gctttttttg ccattaataa cggcaagggg caggcatagc cggttaaatc taaaacatat
     1261 tgcatagcga aatagggaat aaagaaaaag ggcgaatatt gaaattcgcc caatcacaaa
     1321 agattagagt ttacggcggt ctgccatcac tttgcccata gccgataatt tgtcttgagc
     1381 taaatgctct cgcccaagct caaagagtgg ctcttcaatc gcaatatgca catcataacc
     1441 tgccacaaaa cgctcaatta agtctctatc cacattttca cgtttacctg cgagcagatc
     1501 ttcaagctgt gccgacaaat agtcccaatt tttatgtaaa tgaacgtgct ggcgttccag
     1561 ttcgtctacc tctgcttgag cttgtggttg caccttaata agctcaggga agaaatcatc
     1621 ttcttcatct tcgtgatgta aaggggcaga aatgttgaag tagttcaaaa tctgctgcac
     1681 gtcattcttc actgcttggt ttaccccgtt tttctcaagg taatccggca aaatttgcaa
     1741 ctgtttacag aaacttttta ctttgctgtg gcaagcataa agcatatcaa tcggctctgc
     1801 ccagcttgca aaggtttgtg gttcaagttg ttgcatatac actccttgtt atttctgttc
     1861 ttttacttca gattgtaaag gtggcacttc tttgccaatt cgggcataaa attccactac
     1921 aaaatcatca aaacgatctt cttcgatggc ctggcgaatt tctgccatta ggcgttgata
     1981 gtagcgtaaa ttatgaatgg tgtttagtct tgcccctaaa atctcgccac atttgtctaa
     2041 gtgatataaa taggctttgg tgtagttttt gcaagtgtaa caatcacatt caggatcaag
     2101 cggtgtggtg tctgcacgat atttcgcatt acgaattttt acaatgccgt tggtcacaaa
     2161 taaatgtccg ttacgggcat tgcgggttgg cattacgcag tcaaacatat caataccacg
     2221 gcgaacccct tcgactaaat cttctggctt gcctacaccc attaaatagc gtggtttatc
     2281 tgccggaatt tgcgggcaaa cgtattctaa aatgcggtgc atatcttctt taggttcacc
     2341 taccgccaag ccaccgactg catagccatc aaagccgatt tcaactaatt tttccaccga
     2401 gactttgcga agttcttcat aaataccacc ttgaataatg ccaaataacg cattcgggtt
     2461 ttcaagttca tcaaagcgat cacgagaacg tttcgcccaa cgtagtgaca tttccatcga
     2521 tttttttgca taatcaaagg ttgccggata aggagtacat tcatcaaaaa tcattacaat
     2581 gtctgatcca agatcgtatt ggatctccat tgatttttcc ggcgaaagga aaattttctc
     2641 accgctaatc gggttttgga aagttacgcc ttcttcttta attttacgca gtttacctaa
     2701 gctaaaaact tggaaaccgc cggagtcggt taaaataggg ccgtgccatt gcataaaatc
     2761 gtgcaagtca ccgtgcatct tcatcacttc ttgccccggt cttaaccata aatggaaagt
     2821 gttgcctaat aaaatttgcg cccctgtcgc tttaacttct tcaggagtca ttccttttac
     2881 cgtgccataa gtgccaacag gcataaatgc cggtgtttca acgtgaaatt cgcctttcgg
     2941 gcggttaaaa gttaaacgcc cacgacgagc gttaccactt gttgttttta attcgtactt
     3001 cattttaatc cacaaataaa cagttcgtga aagcggtcaa aaaccaccaa aaatttacca
     3061 attagaatcg aaagtcggtg ccgaccccta agccgattcc aacgccgtta gagccaccac
     3121 cggctccaat actgccaccc acaccggttg atgagcaagc agctaacact aaaatgccaa
     3181 cgcataataa gagttttttc attttttgct gtcctaaacg aaaaagagag tctatgatag
     3241 acccaatgta ttctaacctg tttaatggat taaacctaat tttaaagggt aaattatgaa
     3301 aattttacgt aaattcgctg ctgtatgcgt tgtctcaatg gctatgctct ctgctaacgc
     3361 taatttgctc actattagcg agcaggaaat caacgactat ttagccacca aattagctga
     3421 aaaaattcct ttaaaagata aagtcggtat tcctaaatta tttgaattgg attatcgcct
     3481 gcattcactt accagccaaa ttggcagaac cgaggaaaaa aaagtagcta tttctggcgt
     3541 tgttgatgga cttttaaacg caaaaggcaa gaaatatgct gcctctatcc atttaaatat
     3601 ggataccacg ccttattatg atccacaaaa aggggcatta tttcttaaag atgtcagatt
     3661 gttaagttgg tctgcaacac cggctaaata tcaagcagag ctgcaaatgt ttttgccggt
     3721 gttggctgat ggattaagta gttttttaaa cagtacgcct gtttatactt tagatgaaaa
     3781 taaaacaaaa gaagcaatgg tgaaaaagtt cggcaaagcc attgtagtag aaaatggtaa
     3841 tatcaagcta gaaaccacta ttttttaaat aattttgtga tcttcgtcta atttttacac
     3901 tttgatagtt gagcttttac gcgttttatt tacaatccaa atatcgccat tcattatttg
     3961 gagagttcta tggatatcgg tattgttaaa tggtttaaca atgtaaaagg atttggtttt
     4021 attacatcgg atgtatgtga aggagacatt tttgctcatt tttctgaaat tcaagcagaa
     4081 ggttatcgct ctttaaaagt cggccaaaaa gtacagtttg aattagttca aggagagcga
     4141 ggtgcctcag cctcaaatat cacgcctata agcgaaaaaa cgttataatc cgtcgttaat
     4201 aaaattattg ttataaccat actttattag attttaaagc tcagctttta cagctgagcc
     4261 atttttgctt tttgaatatg ccttcctctt atcaattagt cttaattaac ctactttata
     4321 tcttcggtat tggtctaaat attgtactgc ttaggtttct cagtttgcat tttgacccat
     4381 taaataataa cggtatacgt tttcttgttg gtgggttcac cttattattt ttcattttat
     4441 ggagattccg cacatcgctg tctcagctga ttaaaactcc aaaattgatt gcgatttctc
     4501 tatttgtcgg gttaatgatg tccgcaaata tgtatttttg gctaaaaggg gtcaaaatta
     4561 caaatgctgt taccgtctct atttttgggg tattagctat gccatttggt gtgattattg
     4621 ccgccatatt ctttcaagat gaaagagaac gcattaaaag caaagctttc tggttcggct
     4681 caattttaac gatcatcggt tcactcggat ttatttggca cgggaaaaca ctctcgattg
     4741 gcgaaggatt tattcttggt tctgtgttct tatttttgtc gatcattatc cgtaatatac
     4801 aaaacctagt tgtaaaattt gctcgagaac tgaacgtatt aaccctaagt tgtgtaacat
     4861 ctttaactac ttcactctcg agtctattac ttagccaaca agcaggtaaa tttaatgagc
     4921 tttttactgc accaaactgg ctactattct ctctgatggt tgctggtatt tatgcgatta
     4981 tgatcggaat ggtattaacc tttcacatta tccaaaccca aggactgata acctaccaag
     5041 tattggaact attaatgccg gtttcaacag ccatcattgc ttatatttta ctggacgaac
     5101 gtatttccat tgttcaaatg ggctttgctt gtattgtgat tttaggctca agtatcgcct
     5161 taaagttagt aaaatatcct aagcactatt aggatctttg ctaattaata ttggtaaaat
     5221 tacatttggt ttactaatct gagcgttcat tcattagtaa tgataaacaa gcggttattt
     5281 tttgttattt tttggtaaat actgatagtc atgtataaaa acctttcttt gctttcaccg
     5341 acttatccat ttgaccttga attcatcgcc ggtcttactc aatgtgagaa aggtaactat
     5401 cttgattcta ttgtcgatag gcaacaagga atgcacggtt atatgcttca attaaccact
     5461 tttggtcgtg gttctgtttt tgatggtaag cacgttttta ccgctcatcg agggcagtta
     5521 ctcctcttta cacccaatgc cgttcaacac taccaccgtc acccggaaag ccaatattgg
     5581 cactacaaat gggtctattt tcagccgaat cctaaatgga ataaatggct gaattggtca
     5641 gatatggaag aaaaaatagg acgtatcacc attagcgatg atcgttactt tcaggaaatt
     5701 agccaacttt tcagtaaaat tgaattagaa cttaaatcca gtaaattttt taaagaagat
     5761 attgcaacaa gtttgttgga atacttactt atgaaatgta tttccgccga gaaaattgag
     5821 gttattcctg tcattgatca acgcattttg acagtttgtg atttaatctt aacgaatttg
     5881 gctaaaaatg agagcttaga agcaatggca gaaaaagtat ttttatcgcc atctcgcctc
     5941 tcacatcttt tcaagcaatc gctggggatc agcttagtgc aatggcggga attacaacgc
     6001 atttccgaat ccaaaaaatt gctttatttc tctaacatct ctatctctaa tattgcgaaa
     6061 tccttaggct atgaggattc tctctacttt tccaaaattt tcaaaaagca taccgggctg
     6121 tcaccctctg agtttagaac cttagaacgg cgtaaagaca gtgaaatgtg atcttgatct
     6181 cactttactt tgcatagcag aattttccat atcgataaca aaaagttacc tgtttttctc
     6241 tcattcaaaa gcataagata caaacagctt taatagtgct gtttctatta gagaagggat
     6301 atcaagctct gtgagtgata ttcagtgaaa taacttctta tgtatgaggg aagaacaatg
     6361 aaaaaaccaa cgttcaagca cgcattattt tcaagtattt tagctttagc ctgttacggc
     6421 tcggcatttg ccaatgatgt tgttaatatc tccaaaattg acggtatgcc gtggtttaat
     6481 cgtatggcag agggtgttgt gcaagcaggc aaagataaca atatcaatgc ttatcaagtt
     6541 ggtccatcaa ataccgatgc accacaacaa gtaaagttaa ttgaagattt aattgcgaaa
     6601 aaagttagtg ctatttccat cgtccctaac gatgcaaatg ccttagaacc ggtactgaaa
     6661 aaagcgaaac agaacggtat tgtggtatta accaatgagt cagtcggaca acctagtgcc
     6721 gattgggata ttgaaattat cgataatgca caatttgcag cagactatgt agaagaagta
     6781 gcaaaagcta tgggcggaaa aggcggctat gtgatttatg ttggtggttt aaccgtgcct
     6841 caacataatc tgtgggctga tttattcgtg aaataccaga aagagcatta tccggatatg
     6901 tttgaagtga ccagcagaat gcctgttgcc gaaaatatta atgatgcacg ccgtaccacc
     6961 attgatttag tgaaagccca ttccgatctt aaagcggtcg tttcttttgg ttcacaaggt
     7021 cctattggtg cagggttggc agtgaaagaa aaacgcttaa aaaataaatt aaatgtcttc
     7081 ggaatgatga ttccttccca agcagccaat ttaattaaaa gcggtgatat tacaatggga
     7141 attacctatg acccggccaa tgcaggttat gctttagctg ctgtcgctgc caaagtatta
     7201 aaaggcgaaa aaattgagga tggattagag atcccaacgg tcggtaaagc caaagtagat
     7261 agtgagaaaa aactacttca attccacaat gtgctgaaag tcaccaagga aaatatcgat
     7321 aaattatatt aatttgcttg aaatatgggc tgatagccag cccatatttt ccctcaggag
     7381 gcacttatgg catttatttc gatgcggcat atcagtaaaa cattccacgg cataaaagca
     7441 ttaaatcaag tcaatctctc attagattat ggcgaagcac tttgtcttgc cggtcaaaat
     7501 ggctgtggaa aatcaacctt gatcaaaatt ctttccggcg tttatcaacc ggataaaggg
     7561 gctgaaattc aaattggtgc aacccaatat accaagctga caccacagga atcgattgat
     7621 aaaggtattc aagtgattta tcaagattta gccctcttcc ccaatttaac cgtggcagaa
     7681 aatattgcca ttaacctgca ccgaaaattt ggctgggtga gtcaagatca cattcatcag
     7741 gttgccctca ctgctattca aagcattaat gcaaatctag acctgaatgc aatattagaa
     7801 gatttaccga tcgctcaaca acagttagtc gctatttgtc gagcgttagc acaaaatgcc
     7861 agattattga ttatggacga gccgactgcc tcacttactg caaaagaggt caaagatctg
     7921 ttagatgtcg tcatcaaact taaaagcaaa ggcattagca tcatctttgt cagtcataaa
     7981 ttgcaagaag taatgagtgt ttccgatagc gtattagtgc tgaaagatgg caatatggtt
     8041 gggcaatatc ctatccgtga aatgaatgaa aaacgccttg gtttcctaat gactgggctg
     8101 gaaatcgatt acaagcggtt agatttgccg gattttttgc aaagaaaaac cgtattggaa
     8161 gtccgcaatt taacgctgcc tcatcagtat caagagatta acttttcgct acgagaaggg
     8221 gaaattgttg cccttacagg attgctcggt tcagggcgta ctgagctttg cctaagttta
     8281 ttcggcatta ctcaaccaca atccggcgat attttattaa acggtgaaaa agtgatattt
     8341 aacactaacc gtgatgccat tgccaaaggg attgcttatg tatcggaaga tagaatgcac
     8401 accgggctga ttatggcaga gtcgattcat cacaatatta tttcgactat ttttcacaaa
     8461 atcaccgata aattacagat tattcaatcc tcgaaggctt atgcaagtag ccaagccttg
     8521 attgattcat taaagattaa agtatccgat tcagatttgc ctgttaatac cctttccgga
     8581 gggaacgcac agcgagtttc gattgcaaaa tggctggcaa tcgaccccaa aattattatt
     8641 ttagatgccc cgactattgg ggtcgatatc gccaataaag aagggatctt ccaaattatt
     8701 aaatcattgg ctcagcaagg cattgcagtt atttttgtga ctgatgaagt ggaagagacc
     8761 tactacaaca gccatcgggt aattgtaatg aaaaaaggtc gcattgttga tgaaatcttg
     8821 ccggcatatt ccagtgaaaa atcgattgcg gaggttattt atgaaaatca gcaataatca
     8881 tattctttcc agtacgttac tgattttaat cctattatta accctattta ctcgtgattt
     8941 tgcaactatt gagaaccttt atgatgttgt aaataattac gcaatgttaa tgattttagc
     9001 ttgtggttta tttgtggtat tgctgtctgg cggcattgat atttctttcc ctgctatcac
     9061 tattatttcc caatatgtta tggtcactct gatcggtaaa tatgatgtag gatttgccgg
     9121 cgtttttgtt atttcttcca ccatcggcat attattaggt tttattaatg ctctatttgt
     9181 taatcggctt agtgtccctt ccattattat tacgatctca acactcaata ttttttatgg
     9241 cggactactc tattttacca aaggtgtatg gctttatgag tatcccgaat ggtttaccca
     9301 agaaatcgtg ttctttaaac agataactgc tgagggagtg gaatttggat tatcgtttca
     9361 agcattaatg gctattttgg cggtgatatt aaccggctta attaccaata aactcactat
     9421 tggtcgaaaa atttacgctc ttggtggtaa tccggatgca acctcccgta ttgggtttaa
     9481 tctcttattt ctccatctat ttgcatacgg ttatatgggc tttatggcag gcttggcagg
     9541 catagtgcaa tcttataccg tacaatctgt cgcaccggat tcactactgg gttatgaatt
     9601 aaccgtccta gctgccgttg tattaggtgg tgctagttta tcaggtggta gaggcaccct
     9661 gcttggtaca gtaatgggcg taatgttact ggcgattatt caaaacgggc taaatttaat
     9721 gaatgtatcg tcttactggc aaaccattat taccggtatc atcattatct taagtattag
     9781 tgcaacagcc ttaagtcagc ggaaaaaaca aggagcataa cgatgaaaag taaactggat
     9841 ccaacgattt tctatctctt agcactcttc gcagttgcag ttatcgcctt tagtattttc
     9901 attccggata ttttttggtc tgtcagtaac tttcaatcta tggcatcaca aattccagta
     9961 ttaggtattt taaccctagc aatggcatta ccgatgttaa caggtggaat aaatctttcc
    10021 attattgccg gaatgaatgc ttgctcatta attattgcct actttattac gcaatatacc
    10081 ggtatttctt ggttatttat tgctatttta ttaagccttt gctgtgcctt agccattgga
    10141 ttactcaacg gcacattaat tgccattatt cgtgtttcac caattttggc aaccttaggc
    10201 acaatgactt taattaacgg cattaatatt ctagtcacta acggttcaac cattgcgaac
    10261 tttccggaaa caatgttgag tattaatgct tcagcctttt tatggattcc gctacccatt
    10321 ctaatctttc tctttcttgc tgggctgatt tggtttttct tagaaaaaac tgcaatgggt
    10381 aaagcggttt atttcatcgg caataatgaa aaagccacct attattcggg tattaatacc
    10441 aaaaaagtgc tgatttgggt ttatgttatc tcctcaattc tttgtgtatt tgcagctatt
    10501 ttgatgatgt ctaaactcaa ttctgcaaaa gcctcttatg gtgattccta tttgttgatc
    10561 tccattttag ccgcagtatt gggcggtatt aaccctgatg gaggtaaagg gaaactatta
    10621 gggattatgc tcgccttagt tttattacaa gtgattgaaa gtggcttaaa tatgctcggc
    10681 attagcagtt acattacaat gattttatgg ggaagcttat tgttattctt tatcttcctc
    10741 caaaaaaatc gccttttccg actaacacag taatggtggt agattatgca aaatgaaaaa
    10801 caactcattg aacaaggtaa tactgttatt ggtattgaat tgggctcaac ccgaattaaa
    10861 gcggtgttaa ttagctcaga tgggacgatt ttagcaaccg gtggggcgga ttgggaaaat
    10921 cgactgattg acggtatttg gacctatcat caaaatgaaa tatgggaaaa actacaagct
    10981 gcttatatgg atttaagcaa gacagtcaaa gaaaaatatc acacaaccat tcgcacagcc
    11041 aaagcattgg gaattagtgc gatgatgcac ggctacttac ctttcgataa acacggaaat
    11101 ccgctggttg cctttagaac ttggcgaaac aacattaccc taacctcatc ggaaaaattg
    11161 accgcactct ttcaataccc aattccgcaa cgttggagta ttgctcattt acaccaagca
    11221 ttgcttaacc aagagcctca cttgccggaa attgattacc tgacaaccct ctcaggttat
    11281 gtgcattggc aactgaccga tcacaaagtg ttagggattg gcgatgcttc cggcatgttc
    11341 ccgatagata ctgagttgaa atcctacaat ccaacaatgc tggctcaatt tgatcgagcc
    11401 attgccgact accgtatgcc ttggaaattg gaagcgattt tgccacaagt tcgtgttgct
    11461 ggtgaacaag cgggcaaatt aaccgaaaaa ggtgcaaaat tgttagatcc aaccgataat
    11521 ttgcaagctg gcattccact ttgtccacct gagggtgatg ccggaacagg tatgattgca
    11581 accaactgta tcaaagaaaa aaccggtaat atttctgccg gcacctccgc atttgcaatg
    11641 attgtgttag aaaaagccct atccaaagcc tattcagagc tggatattgt gacgaccccg
    11701 gcaggtaaat tagtggcaat ggctcacgct aataattgca cctctgatat taatgcgtgg
    11761 gtgaatttat tcggcgaatg cttatcggtt tttggcgtaa atatctgcac cgaagaactt
    11821 tatgaaatgt tatttctcca tgccttgcaa ggcgatgcag attgtggagg gctattatcc
    11881 tacggcttcc actccggtga acataatgtc ggtttatccg aaggctgtcc ggttttcttg
    11941 catccaacga atgcccattt taacttagca aactttatgc gaacccatct ctataccgct
    12001 tttggtgcaa tgaaattagg aatggacatt ctcattaacc aagaaaaagt ggaaatttcc
    12061 cgtattctcg gtcacggtgg tatatttaaa acagaaggtg ttgcacaaaa aattctgtct
    12121 tccgcactga atattccatt ggctaccgca agtactgctt caaatggcgg agcttgggga
    12181 attgcattac tggcagactt tctcagcgta tcagaccgtt acagtttaga agaatattta
    12241 gataattgca ttttcaacac caccaaactc aatctggttc aaccggataa aacaatgagt
    12301 gaaggttatg aacgctttat gcaacgttat aagcaaggca ttcctgtggt agaaaaagcg
    12361 ttgtttttaa atacagatta aataattata atttaagtat cacaagcggt tatttttgca
    12421 aaaaacgacc gcttgttatt tacatttgta caaaaaatac ctactataaa gacgcatttg
    12481 taaaatgtgc attgatatat cgcaagtttt gtgtatagga aatgaactaa ttactgtgtc
    12541 aatcagtccc tttcttcatc gttataccct cttgcaaatc cgattaatct atccttagtt
    12601 aaggtgtttt atgttagcga tttggcaaag ttttaaacaa aattatctaa tcaaatattg
    12661 gaatcctgtt gcagcagtga tcgcagctgg tattatttca gcttattatt tcggcattac
    12721 tggcacttat tgggcggtta caggggaatt tacccgttgg ggcggtcatc tgttaaatgc
    12781 tttgggtgtt gatgtttcga actggagcta ttttcaactc atcggcttag acggcaccat
    12841 ctttacccgc attgacggtg tgatgattct cggtatgttt gccggctgtc tttctgccgc
    12901 attatgggcg aacaacgtca aatggcataa tcagccacat aaaaaacgga ttatccaagc
    12961 cttgattggc ggtgcgttag ccggtttcgg agcccgttta gcaatgggct gtaacctcgc
    13021 ctctcttttt accggtattc cgcaattctc cgtccacgct tggtttttca cctttgcgac
    13081 cgccatcggc acttactttg gggtaaaagt gactttatta ccgatgttta gagtgaaatt
    13141 agagctgaaa aaaggggcag caaaaatcaa agaaaacgat ccgaaacaag ctaatcgccg
    13201 tttttgggtt ggtatgctca tttttatcac ttatctttct gcttcccttt atgtaatgca
    13261 atcctcaatc aaacttggtt ttgcaatgct ttgcggctta gcctttggct tattgattga
    13321 acgagcccaa atttgcttta cctccgcttt ccgtgactta tggattaccg gacgggctta
    13381 tatggcaaaa gcaattattt tcggcattat tgccggcaca atcggcgtgt tctcttatat
    13441 tcaattaggt gtttcaccta aaattttgtg ggctggccca aatgccatta tcggcggatt
    13501 attattcgga tttggcattg tgcttgccgg cggctgtgaa accggctgga tgtaccgttc
    13561 aatggaagga caggttcatt ttatgtgggt cggcgtaggc aatgtagtcg gttcaaccct
    13621 gctggcttac tactgaggcg acttagctcc ggtgcttacc cttgattatg aaaaaatcaa
    13681 cctactcaaa gaatttgggc cggttggcgg attattcatc aattatggct tattaattct
    13741 ttgcttaatc gctgtagttt ggtgggaaaa acgcttcctt gccaaagcga aagcaaaatt
    13801 agcaactgcg taatcttttt aacttcaacc aacaagagga aaatgactat ggcattcacc
    13861 gttgtacaaa aactagataa agatccaaaa gacatcacgc ctgattacac cttagatacc
    13921 ttaggcgaac cttgccctta ccctgcgatt acgatgttag aaacaatgcc acagctgcaa
    13981 aaaggagaga tattggaact gttaagcgat tgttcccaat cgattaataa tattccgatt
    14041 gatactaaaa atcacggcta taccctatta agcgtggaac aaaacggcac taaattacgc
    14101 tatttaattc agcgttaatt gcaaaaaatt cgcacaaaac gaccgcttgt cgtaaaatag
    14161 caactattta agagccttgt aacgcaaggc tcttttattc taagaggtaa aagaaaaatg
    14221 aataaatacg ctttacttgc aatattttgg tttattattg gcatttatgc tttacttttt
    14281 cgtgaaagca ctaatgatat accgcctttt ccacattttg ataaagtaag ccattttgcc
    14341 ttattcttta tccagatctg gttatctgca aacgccttta tccgttcaaa gaaagggata
    14401 ccttattttg ggctaataat ttttgcctta ctctatgctt tcaccagcga atgggctcag
    14461 gcaaccttca cctcaacccg agaaggttct tggcttgatg ggctagcaga tatgctagga
    14521 gcctcacttt cattattgct ggtaaaatat tgcaaaaaat aaagcataaa agaccgcttg
    14581 ttatatggtt tagccatact acaagcggtc attttttacc aaaattatgc catcaactca
    14641 tcaatcaatt ctttcacact tttgattttg ttgatttgtg aaatgccatt gcccaccgac
    14701 acatagccat tgtcaaaatc cccttctaac atacccaaac gcattcctgt accagcgttc
    14761 attaccttag caatctcact acgagttgcc ccattttcgc tcatttcaaa gcattttttc
    14821 gctaatccag tcggcagtga acggtagtaa tgtggttcgg tacggaataa cagcagatca
    14881 ttggcatttg cctccacaat ccagtttttc actttttcgc ttgcacggca ttcttcggtg
    14941 gcgataaatg ccgtgccaat ccacacgcct tcagccccaa gcgttaaggc agcctgcacc
    15001 gcttttttat cggcaatacc accagccagc attatcggca aatccacctt gcccacaaat
    15061 tccgccagca cattaaaact gcctacctct ttcatcggca aagtaccgcc ctcatcaaaa
    15121 cccgtcagca ccaaaatatc tgctcccaat gcttgggctt ttaaagcgtc cgccaaattg
    15181 ggattaggca aacggcagat gattttaatg ccagcagctt tgaatttggc gtaaatctct
    15241 gggtcaagcc agccgttatc cagcaccaca ggcacacgct cttcaatgaa taaatccacc
    15301 attaacggaa tcagcgaaaa atcataagac aaaataaatg gtacgccaaa aggcttatcg
    15361 gtcaatgcct taaccttacg aatctcgtta cgcatacggt caagtacttc ttcgttggaa
    15421 gttggattgg tggtttgccc tgcgtgtggg gctaaaaaac caagcccacc agcctcggca
    15481 acgcttgcta ccagatgagc gtccgtcagc caagacattg gcgcttggac gatagggtgc
    15541 ttgatattta agatttgggt aatgcggttc attggatttt cctgtttgaa taaaaagaat
    15601 tggacgtagt ttaatggttt tggatttgag agggaatgcg tgaaaatggg aaggtggttt
    15661 tcggatttgg aaaattatca atgctaaaat acttgaaata cacacgccaa tcctcatatc
    15721 aacaaaattg aatatttaat tatggtaaaa gaaaatgtct attagatggg aaaacatcaa
    15781 gcccttacaa ggttctcaaa atagtgcttt tgaagagcta gtatgccaat tggcacgcca
    15841 agaatttaaa tctcaaggaa aatttactcg aatttctgca cctgatggtg ggattgaagc
    15901 aatgtgtgaa ttgccagatg gttccgtatg tggttggcaa gccaaatatt ttttaagctc
    15961 attttcttca tcacaatggc aacaaattga agattccttt aaagaatctt taaaaaacta
    16021 tcctaaacta accaaatact atgtttgtgt ggcaaccgat agagcaaatg ccaatgtatc
    16081 tggaaagaaa tcatttctta ccaaatggga ggagtatacc caaagatgga aagactttgc
    16141 tcaatcacaa ggtcgtgaaa tagaatttga attttgggga agttttgaat tatctgactt
    16201 attatcaaaa cctgaaaatg caggcaaaaa attcttttgg tttaacgaaa gcgaattatc
    16261 tgacaaatgg tttgaacaat acaatcaaca agccattaat aatcttggtg tgcgttatac
    16321 acctgaaatt aatgttgatt tacctattgc aatgcaatta gaaagcttgg caagaaccca
    16381 aattttcaaa aaacatctga gtgatgaatt tcataaattg ttagtagaaa ttaaatcaca
    16441 atacaaatct ctttatcgtt acgaagcg
//
LOCUS       DANLTI010000052        16294 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.052, whole genome shotgun sequence.
ACCESSION   DANLTI010000052 DANLTI010000000
VERSION     DANLTI010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16294
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.052"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..167)
                     /locus_tag="PXB09_001303"
     CDS             complement(<1..167)
                     /locus_tag="PXB09_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5233428.1"
                     /translation="MKAQQLKNAILQLAIQGKLVPQDPNDEPASELLCKIQAEKDRLI
                     AEGKIKKNKKTA"
     gene            complement(373..2034)
                     /locus_tag="PXB09_001304"
     CDS             complement(373..2034)
                     /locus_tag="PXB09_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5233429.1"
                     /translation="MLTWEHIEKMIAHQQFIREKAEIEYKEAKNSVPKDLWHTYSAFA
                     NSNGGFILLGIKENEQGHFPELLISGVNDPDKVIDELFSQSRSEKVSKSLLKDNDVKI
                     FQVENKSVIAIYVKAADILDRPIHLNGDYRLSYVRLNSGDHKLTSSELRSFISSYSQK
                     DADGRIVPYASIDDISLSTLDKYRNLLKAHNSTSKLLTLSDEKLLQEIGAYKKDLAQN
                     SEGITNAGLLMFGKHYAITSIFPHFFFEYYEEAGDVKRYTLRITDFDLEEGNLFEFYL
                     KIVPLIQELGKDKHFKLDNLTRTEENEITDGLREALINAITHADYFNNVRHLKVIKTK
                     DNKLIFENAGVMLVDIPTAIAGQRSECRNSIIHNLFHRLGLCERQGQGVRDIYSYWQS
                     RNFNSPLLESEIDYTKLTLTFQSGMIADFEEKFTACFGENFSELQPIQKDCLLFIAFN
                     QGKAMFAELAQKLPQYPRRNITLALARLKEKGLLTSSGSPRKQLYTLVNLEWIITEKS
                     QDDYFNPPFDQLDKASESKGAPPKKSKVKQVKQLPQNKANKLPPK"
     gene            complement(2047..3516)
                     /locus_tag="PXB09_001305"
     CDS             complement(2047..3516)
                     /locus_tag="PXB09_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL5233430.1"
                     /translation="MSLNNIVKRLQDVMRNDAGINGDAQRIEQIVWILFLKIYDAKEQ
                     EWELENDEYHSILPNFLRWQNWAEDKKDGKAMTGDELLSFVNNELFPTLKNLPISADT
                     PMNQRIIRAAFEDNNNYMKNGVLLRQVINIIDEIDFAHYQERHAFGDIYENILKSLQS
                     AGNAGEFYTPRAVTDFMVQAIKPKLGERIADFACGTGGFLTSALKVLESQIQTLSDRT
                     LFNNSVYGIEKKALPHLLCITNLLLHDIDNPNVHHDNALEKSVKDYTENDKFDVILMN
                     PPYGGSEIEQIKKNFPTALQSSETADLFMSVIMYRLKQNGRAAVVLPDGFLFGTDNAK
                     VAIKKKLLEEFNLHTIIRLPHSVFAPYTSITTNILFFDKTEPTRETWVYRLDMPQGYK
                     NFSKTKPMKLEHFNEVVEWWGNRQVIEVEGFDKAKSFTLKEMSDRQYNLDLCGFPHEE
                     EEILPPDELIADYQRKRTAYNADIDKILAEITDILGIKL"
     gene            complement(3564..5915)
                     /locus_tag="PXB09_001306"
     CDS             complement(3564..5915)
                     /locus_tag="PXB09_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5233431.1"
                     /translation="MYTLQELKQMNEQEIRSRLISPAIRNAGWSDRQIGEEYTFKTNK
                     RFTDGQVVVDPKTTQTKRIEAKRVDYLLYTSANQKIAVVEAKDNHHSSRHGLQQAMTY
                     ARLLDVPFAYSSNGDEFVEHDFITGVQRTLPMSAFPTPDELHQRWAKQYTTEELKIIQ
                     QPYYTSSTDTFKEPRYYQEIAINRTVEAVAKGQQRILLVMATGTGKTYTAFQIIHRLK
                     TSGAKKKILFLADRNVLVDQPMMQDFKPFKDKMVKVSNKKLDSAYEVYLALYQQLDGE
                     TDNELFKQFQPSFFDLIVIDECHRGSAKEDSDWRAILKYFKDATHIGMTATPKETDDA
                     SNITYFGEPIYTYSLKQGIEDGFLAPYRVIRVDLDCDLKGWRPTKGLKDHQGNEIEDR
                     LYTVKDFDYNIVLNDRTRLVAERICEFLRKTDRLQKTIVFCANINHAERMVAELSRLN
                     ADMLKHNSKYVCQITGDQSGKGVDLEEFCDVANEGKDYPVIAVTSKLMTTGVDSKTCK
                     LVVLDANIQSMTEFKQIIGRGTRLRPDFGKEFFTILDFRGVTRLFADPAFDGEPVVIL
                     DVPENKPLVEQPLPKPSDKDIIKDPELKPYKIPVVVDFGTLKLRILDEKVQYLNEQGE
                     LVSEDIDLFSKREMQKEFGSYEQFQQQWTTSGEIFSKFYTDPKWLAALRQTRQFSHDV
                     EDFDVLSHISFGKKPLTKTERAEKVKQSGYVEQYSPENQQVLGLLLNEYVKSGNQDLT
                     KTEILKTPQFSRFGGLVSIIKNFGGKELYQKAVKGLEKMIYSE"
     gene            complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXB09_001307"
     CDS             complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXB09_001307"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251643.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5233432.1"
                     /translation="MQLKKYPVPTYFQRVKIALHYLLPQLAITRAAGWLAEQKWGVVT
                     HLIIKLFAKQYKVNLSEAKKTEPSDYATFNEFFIRELKENARPINQDPNTLCLPAEGK
                     VSESGEISDNRLLQAKGHHFTLETLLANDEEMAAKFKDGTFITTYLSPTDYHRVHMPC
                     DGTLRKMIYVPGELFSVNPFLAEHVPNLFARNERVICEFDTAFGPMLQILVGATVTAS
                     MSTVWAGVINPPRADEVVVWNYETEGEKAIKLQKGEEMGAFRLGSTVINLFPKGKVHL
                     NPALIAGMQTRMGEELGRIIN"
     gene            complement(7045..7383)
                     /locus_tag="PXB09_001308"
     CDS             complement(7045..7383)
                     /locus_tag="PXB09_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDL5233433.1"
                     /translation="MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQI
                     TNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRTKNGNFKNIEQLAEVSGIGQATV
                     EKNRANIILE"
     gene            7676..8995
                     /locus_tag="PXB09_001309"
     CDS             7676..8995
                     /locus_tag="PXB09_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="opacity-associated protein A"
                     /protein_id="HDL5233434.1"
                     /translation="MTQNNFRKEPVFGESSVTSQDAEATKTDTAQAPYVSLRSTKAPG
                     HTFTPIMKRPDAKVEDHTADVFSAKQAKEFQFTPSSEATEAVEPDNTIHSVEESVSTA
                     SFNAVEAQENVEKEVVKPAPESFTTERIIPNAATAAAAATAAAAATKTKEIKAKMPPK
                     TRRLLLVALLALALLVLFFLLKPSTPETVEELQSQQGGSLPIEFRPVDEAEAKRAEEQ
                     ARAEQEAAEAAKAQEQAQAAQQESVTVAPAQTEQTMAKPSQDSQSQTQSQAVVEQPVA
                     VKPVENKPVVAQPAIKPKTENSVVFQPETTVKQQPKAPAKTEVKTERATLAAKETAKT
                     AAKPVEKAPTKTEAVKAAPAAESANAVATKTMTVPKGVSLMQVFRDNNLNISDVNAMS
                     KVNNVVSNLKVGERVTVRLDKNNRVVEMSIGSGGKFTRQANGSYTFK"
     gene            9113..9475
                     /locus_tag="PXB09_001310"
     CDS             9113..9475
                     /locus_tag="PXB09_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDL5233435.1"
                     /translation="MLVACSTVVTPVEQIHQVQKEKESVKKVTKLIAQAPKVSLYRCE
                     NDKKVEVERQGRTKKALKKEIVTVSYQGTTHQLSPSVTRDGKKYTNIRWTWHETRSGK
                     AFLYNNTKKTLAANCIKQ"
     gene            9586..10623
                     /gene="waaF"
                     /locus_tag="PXB09_001311"
     CDS             9586..10623
                     /gene="waaF"
                     /locus_tag="PXB09_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDL5233436.1"
                     /translation="MNILVIGPSWVGDMMMSHALYQQLKIQYPNCQIDVMAPDWCCPL
                     LARMPEVRNAISMPIGHGSFRLCERYRLGKSLRNQYDMAIVLPNSLKSAFIPLFAKIA
                     RRRGWKGESRYFFLNDLRSNKNDYPMMVQRYVALAFEKATVPTAQQLPIAYPYLTTDS
                     EQIEQTKAKFEKQLAYAENRPAIGFCPGAEFGPAKRWPHYHYAILAKMLIEQGYSVRL
                     FGSKKDEAAGEQIRLALPENLQRYCLNLAGQTDLNQAVDLIADCNAVVSNDSGLMHIA
                     AALNKPLVALYGPTSPQYTPPLSQNAEIMRLIEGGLIKIRKGEGAEGYHQSLIDIQPE
                     MVMDKLAELLV"
     gene            10690..11649
                     /gene="rfaC"
                     /locus_tag="PXB09_001312"
     CDS             10690..11649
                     /gene="rfaC"
                     /locus_tag="PXB09_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDL5233437.1"
                     /translation="MKILIVKTSSMGDVLHTLPAITDMQNAIPDLKVDWVVEENFTEI
                     PAWHSAVNKVIPVAIRRWRKNLCQRQTWVECQQFLKQLKSEQYDAVIDAQGLIKSAVL
                     VTRQAKGKKFGYDKNSAREGLSSLFYDETFNIPYQQHAVERIRKLCAKSLGYALPTER
                     GDYCIAQHFAKNPQKTTAYIMLIHATTRADKHWQEAYWAELIQALDKHNLAVRLPWGN
                     QAEKERAERLASVANNAKVLPKMSLTDIATQLAGAAAVVSVDTGLSHLAAALDKPNVI
                     LYGATDPKLIGAYGQNQFYLKADKMENITSSQVLEKLLPLINK"
     gene            11770..12144
                     /gene="rpsL"
                     /locus_tag="PXB09_001313"
     CDS             11770..12144
                     /gene="rpsL"
                     /locus_tag="PXB09_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDL5233438.1"
                     /translation="MATINQLVRKPRVKKVVKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRIRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGAL
                     DCAGVKDRKQGRSKYGVKRPKA"
     gene            12275..12745
                     /gene="rpsG"
                     /locus_tag="PXB09_001314"
     CDS             12275..12745
                     /gene="rpsG"
                     /locus_tag="PXB09_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDL5233439.1"
                     /translation="MPRRRSIEPRKILPDPKFGSELLAKFINVLMVDGKKSTAEKIVY
                     GALETLTQRSGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGSAVKKREDVHRMAEANKAFAHFRW"
     gene            12847..14949
                     /gene="fusA"
                     /locus_tag="PXB09_001315"
     CDS             12847..14949
                     /gene="fusA"
                     /locus_tag="PXB09_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDL5233440.1"
                     /translation="MARTTPISLYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMSQQYPQHRINVIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRVVEQIKT
                     RLGGNSVALQLPIGAEDSFKGVVDLIKMKAINWNEADQGMTFTYEDIPADMLEACEEH
                     RAMLVEAAAEASEELMEKFFSGEELTEDEIKAALRQRVLAGEVIPVCCGSAFKNKGVQ
                     AMLDAVIDYLPAPTDIPAIKGINEDETEGERHASDDEPFASLAFKIATDPFVGNLTFF
                     RVYSGVINSGDTVYNSVKQKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTG
                     DTLCAIDAPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEE
                     SGETIISGMGELHLDIIVDRMKREFKVEANIGKPQVSYRETIRTRVNDVEGKHAKQSG
                     GRGQYGHVVIDLYPLDAEGPGYEFVNEIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYP
                     VVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFAKASPVLLEPIMKVEVETPPDYV
                     GDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLK
                     YAEAPKNVADAIIEARRK"
     gene            15009..16193
                     /gene="tuf"
                     /locus_tag="PXB09_001316"
     CDS             15009..16193
                     /gene="tuf"
                     /locus_tag="PXB09_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDL5233441.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKHFGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
                     YDFPGDDTPIVRGSALQALNGVAEWEEKILELANHLDTYIPEPERAIDKPFLLPIEDV
                     FSISGRGTVVTGRVERGIIRTGDEVEIVGIKDTAKTTVTGVEMFRKLLDEGRAGENVG
                     ALLRGTKREEIERGQVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFR
                     TTDVTGTIELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKI
                     IK"
BASE COUNT         4851 a         3189 c         3454 g         4800 t
ORIGIN      
        1 gcagtttttt tgtttttttt gatctttcct tctgcaatca agcggtcttt ttctgcttgg
       61 attttgcaaa ggagttcgct tgccggttca tcatttggat cttgtggaac gagcttgcct
      121 tggattgcta gttgtaggat tgcgtttttt agctgttggg ctttcatttt ttattctcaa
      181 taatcggttg ttatttctta aagtatcttt gattacggtg ttttgggttt tctgggaatt
      241 gcatttcgat cacaccaagc gttagtgcag gttttaaata ctgcatacgg aaatgcttat
      301 catcttttaa cctgagtttt ttcataattt ctttgctctt catcggctca agcaacactg
      361 aaagtaagcg atttacttcg ggggtaattt gtttgctttg ttctggggta attgtttgac
      421 ttgcttcact ttgcttttct tcgggggggc gcccttactc tcactagctt tatcaagttg
      481 gtcgaaaggt ggattaaaat aatcatcttg tgatttctct gtgattatcc attctaaatt
      541 cactagggta tagagttgtt ttctcggact ccccgaactg gttagtaagc ctttttcttt
      601 cagtcgtgct agtgccaaag taatatttct gcgtggatat tggggcagtt tttgtgctaa
      661 ttctgcaaac attgctttac cttgattgaa ggcgataaag agtaagcaat ctttttgaat
      721 aggctgtaac tcagagaaat tttcgccaaa gcaagcggta aatttttcct caaaatctgc
      781 aatcatacct gattgaaaag ttaaggtgag tttagtgtaa tcaatttcac tttctaaaag
      841 cggtgaattg aaatttcggc tttgccaata tgaataaata tcccgaacgc cttgtccttg
      901 tcgctcacat agccctaaac ggtggaataa gttatgaata atagaattac ggcattccga
      961 tctttgccct gcaatagccg tgggaatatc aaccaacatt actcctgcat tttcaaaaat
     1021 cagtttgtta tctttggttt taatgacttt tagatggcga acattgttaa agtaatctgc
     1081 gtgagtaatt gcattgatta gagcttcccg tagcccgtca gtaatttcat tttcctcagt
     1141 acgggttaaa ttatctaatt tgaaatgttt atctttacca agctcttgaa taagtggcac
     1201 aattttcaag taaaattcaa agagattgcc ttcttcaaga tcaaaatcgg taatccgtaa
     1261 tgtatagcgt tttacatcac cagcttcttc gtaatattca aaaaagaagt ggggaaatat
     1321 gcttgtaatg gcatagtgct taccaaacat caataagcct gcattggtaa tgccctcgct
     1381 attctgtgct aaatcttttt tataagcccc aatttcttgc agcaatttct catcggataa
     1441 cgtaagtaat tttgatgtgc tgttatgggc tttcagcaga tttctgtatt tatccaatgt
     1501 gcttaaactg atatcatcaa tagaagcata aggcacaatt ctcccatcag catctttttg
     1561 gctatagctt gaaatgaaag aacgcagttc agaggaggtg agtttatgat cgcctgaatt
     1621 taaacgaaca taagaaagtc gataatcacc atttaaatgg ataggacggt ctaaaatatc
     1681 agctgctttc acataaattg caatcacgct tttattttca acttgaaaga ttttcacatc
     1741 attatccttt aataaggatt tactgacttt ttcactacga gattgggaaa ataattcatc
     1801 aatgacttta tcaggatcat taacaccaga aattagcagt tcaggaaaat gtccttgttc
     1861 attttccttt attcctaata aaataaagcc accattgctg tttgcaaaag ccgaataagt
     1921 atgccaaaga tcttttggca cactattttt tgcctcttta tattcaattt ctgccttttc
     1981 tcggataaat tgctgatgtg caatcatttt ttcgatatgt tcccaagtca gcattttatg
     2041 ctcctattac agtttaatgc ctaaaatatc ggtaatttct gctagaatct tatcaatatc
     2101 agcattgtaa gcggtgcgtt ttcgctgata atctgcaatt agttcatcag gcggaaggat
     2161 ttcctcttct tcgtgaggaa agccacataa atcgaggttg tattgacggt cggacatttc
     2221 ctttaatgta aaacttttcg ctttgtcaaa cccttcgact tcaatcactt ggcgatttcc
     2281 ccaccattca acaacttcgt tgaaatgttc caatttcatc ggtttagttt tggagaaatt
     2341 tttataaccc tgtggcatat caaggcgata aacccaagtt tcacgggttg gctcggtttt
     2401 atcaaaaaac agaatattag tcgtaatcga ggtataaggg gcaaagacac tatgcggtaa
     2461 gcggataatc gtatgcagat taaactcttc taatagcttt ttcttaatcg caactttggc
     2521 attatctgtg ccgaacaaaa atccgtcagg cagcaccacc gcagcccgtc cattctgttt
     2581 taggcggtac ataattaccg acataaacag atcagcggtt tcactgctct gtaaagccgt
     2641 agggaaattc tttttaattt gctcaatttc tgaacctccg taaggtggat tcatcaaaat
     2701 cacatcaaat ttatcatttt cggtgtaatc tttgaccgat ttttctagag cattatcgtg
     2761 atgtacattc ggattatcaa tatcgtgcaa caataaattg gtaatacaaa gcaggtgagg
     2821 aagggctttt ttctcaatgc catacacaga attattgaat aaagtgcggt cagaaagggt
     2881 ttgaatttga ctttccaata cctttaacgc cgaagttaaa aaaccacccg tcccacaggc
     2941 aaaatcggca atgcgttcgc caagtttcgg tttgattgct tgtaccataa aatcggttac
     3001 agcgcgaggg gtataaaatt cccctgcatt acctgcactt tgtaaacttt tgaggatatt
     3061 ttcataaata tcgccaaagg cgtgtcgttc ttggtaatgg gcaaaatcaa tttcatcaat
     3121 gatattgata acctgacgta ataacacccc atttttcata tagttgttat tatcttcaaa
     3181 agcagcacgg ataatccgtt ggttcatcgg cgtatcggct gaaataggca gattttttaa
     3241 agtcgggaaa agttcgttat tgacgaaaga gagtaattca tcaccagtca tcgctttgcc
     3301 gtctttttta tcttccgccc aattttgcca gcgtaaaaaa ttcggcaaaa ttgagtgata
     3361 ttcatcgttt tccagttccc actcttgttc tttagcatcg taaattttca agaataagat
     3421 ccagacgatc tgttcaatgc gttgggcatc accgttaatc cctgcatcgt tacgcattac
     3481 atcttgcagg cgttttacta tgttgttgag gctcattgtg atccttgttt atctgtaaaa
     3541 ttttgttgta aaataaccgc ttgttattcc gaataaatca tcttttctaa gccttttacc
     3601 gctttctggt agagttcttt accgccgaaa tttttaataa tagacactag acctccaaaa
     3661 cggctgaatt gcggtgtctt taaaatttcg gttttagtca gatcttgatt gccggatttg
     3721 acatattcat taagcagcaa ccctaaaact tgctggtttt cgggcgaata ctgctccaca
     3781 tagccacttt gtttcacttt ttctgctcgt tcggttttag tcagtggttt tttgccaaag
     3841 gagatgtggc ttaatacatc aaagtcttca acatcgtggc tgaattggcg tgtttggcga
     3901 agggctgcca gccattttgg atcggtgtaa aatttcgaga aaatttcacc gcttgttgtc
     3961 cattgctgtt ggaactgttc gtaactgccg aactcttttt gcatttcccg ttttgagaac
     4021 agatcaatat cttcagaaac cagctcgccc tgctcattca gatattggac tttctcgtct
     4081 aaaatgcgta atttgagtgt gccgaaatcg acaactaccg ggattttata tggctttagc
     4141 tcggggtctt taatgatgtc cttatcactg ggtttaggaa gcggttgttc gacaagtggc
     4201 ttattttccg gtacatctaa aatcaccacc ggctcaccat caaatgccgg atcagcaaac
     4261 aggcgagtaa cgcctcgaaa atctaaaatg gtgaaaaatt ctttgccgaa atcagggcga
     4321 agacgagtgc ctcgtccgat aatttgttta aattccgtca ttgattgaat gtttgcatca
     4381 agtacaacca gcttacaggt tttgctatct acacctgttg tcatcaattt agaggttacg
     4441 gcaatcacag ggtaatcttt cccttcattt gctacatcac aaaattcttc taaatcaacg
     4501 cctttgcctg attggtcgcc tgtaatttgg cagacatatt tggaattgtg tttcaacata
     4561 tcggcattga ggcgtgaaag ctctgccacc attcgctctg catggttgat gttggcacag
     4621 aagactattg ttttctgcaa gcggtcggtt ttgcgtaaaa attcgcaaat tctctccgca
     4681 accaagcggg tgcgatcatt tagcacaatg ttgtaatcga aatctttgac tgtatagagg
     4741 cgatcttcaa tctcattacc ttgatgatct tttaaacctt tggttggtcg ccagcctttt
     4801 aaatcacagt ccagatcaac acgaatcact cgataagggg caagaaagcc gtcttcaata
     4861 ccttgtttga ggctataggt ataaatcggc tcgccaaaat aggtaatgtt gctggcatca
     4921 tcggtttctt tgggggttgc agtcataccg atatgggtgg cgtccttgaa atacttcaaa
     4981 atagcacgcc agtcagaatc ttcttttgct gaaccacgat gacattcatc gatcacaata
     5041 agatcaaaga aagagggttg gaactgctta aacagttcgt tatcggtttc accgtcaagc
     5101 tgttgataaa gtgcaagata gacttcataa gcactgtcga gctttttatt gctgactttc
     5161 accattttgt ctttaaacgg tttgaagtct tgcatcattg gctgatcgac tagtacattg
     5221 cgatcggcaa gaaataaaat tttctttttc gcaccactgg tttttaaacg atggataatt
     5281 tggaaagccg tataggtttt acccgtgcct gttgccatta ccaataaaat cctctgctga
     5341 ccttttgcta cagcttcaac agtacggtta atcgcaattt cttggtagta acgaggctct
     5401 ttaaaggtgt cagtgctact ggtgtaataa ggctgttgaa taattttcag ctcttcggtg
     5461 gtatattgtt tcgcccaacg ttggtggagt tcgtcgggag taggaaatgc tgacatcgga
     5521 agggttcgtt gtacgccagt gataaaatcg tgttccacaa actcatcacc atttgagcta
     5581 tatgcaaaag ggacatcaag caatcgagcg tatgtcattg cttgctgtaa gccgtgtcgg
     5641 gaagagtgat ggttatcttt ggcctcgacc acggcaattt tttgatttgc ggaagtatag
     5701 agcagataat caacccgttt tgcttcgatg cgtttagttt gcgtcgtttt tggatcaaca
     5761 actacttgcc catctgtaaa tcgtttattg gttttaaatg tgtactcttc gccaatttgt
     5821 ctatccgacc atcctgcatt tctaattgca ggagagatta atcgagagcg aatttcttgc
     5881 tcgttcatct gctttaattc ttgaagtgtg tacatatttt tccttccgat aagagtttct
     5941 tatcggaaga ttatagcaaa cagtttaggt aaaattaact caggatttaa ttgataattc
     6001 tacccaactc ttcccccatt cgggtttgca ttcctgcaat aagtgcaggg ttgagatgta
     6061 ctttaccttt cgggaagagg ttaattacgg ttgagcctaa acggaaagct cccatttctt
     6121 cgcctttttg gagtttgatg gctttttcgc cttcggtttc gtaattccaa actaccactt
     6181 catcagcgcg aggcggatta attacgccag cccaaaccgt actcatactt gcggtaaccg
     6241 ttgcaccgac caaaatctgt agcattggtc cgaatgcggt gtcaaattca caaatcacac
     6301 gctcattgcg agcgaataag tttggaacgt gttcggctaa aaacggattg acggagaaca
     6361 attcgcccgg cacataaatc attttacgca atgttccatc gcacggcata tgtacacgat
     6421 ggtaatcagt tggcgataag taggtggtaa taaatgtgcc gtctttaaat tttgccgcca
     6481 tttcttcatc atttgccaat aaggtttcta gcgtaaaatg atgccctttt gcttgtaata
     6541 aacggttatc cgaaatttcg cctgattcgc tgactttacc ttctgccggt aagcaaagtg
     6601 tatttggatc ttgattaatc gggcgtgcgt tttcttttaa ttcacggata aaaaattcat
     6661 taaaagtagc ataatctgac ggctcggttt ttttagcttc agataaattg actttatact
     6721 gttttgcaaa cagtttgatg ataaggtgag taactacgcc ccatttttgc tctgctaacc
     6781 aacctgccgc acgggtaatt gccagttgtg gcagtaaata gtgcagagcg attttcacac
     6841 gttggaaata ggttggaact ggatattttt ttaattgcat tgcgttttcc ttttatttaa
     6901 aaacgagaat ttgcgtttaa ttgggggcga agtatagcaa atacaatgca aaatagataa
     6961 aaaatcttta aggtgttgaa gtggctacaa agaaaaaaac agataggggc tttgtaggaa
     7021 ttccacttca acaatttggt tgtcttattc taaaataata ttggctcgat ttttttctac
     7081 cgttgcttgc ccaattccgg agacttcagc aagttgctca atgtttttaa aattgccgtt
     7141 tttagtacgg taatcgacaa tcgcttgagc ttttttctgc ccaattccca ctagcttgtc
     7201 ttgcaattca gcagcactag cagtattgat atttaccgca ttagcgttgg tgatttgtgt
     7261 ttgctgtacg ggttgagtga ctgcattttg ttcaacaggc attgtagttg gcggtgtttg
     7321 ggcaaaagcc attgcattta agccaaacaa gaatgttaga ccaagttgtt tgattttctt
     7381 cataggattt ccttattagt tgttgaaagg tcgaaaggaa gattaagagg gaataaaata
     7441 gaactcaacc ggcaaaaata aatttttcga cacagatcga aaaaatagaa aatggctaaa
     7501 cttctagacg tgcatttggt ctgaaattca atgaaagtaa atagatttgc aaaaaattag
     7561 gcaaaaatga ccgctagttg cgtaaattta gttaaataaa ttcaaatagc ggctgaattg
     7621 ctttagaata tcgccatttt tatactcatt aacaacgcta ttatttggaa ttaatatgac
     7681 acaaaataat tttcgcaaag aaccggtttt tggtgaatct tcggttacct ctcaagacgc
     7741 tgaagcaacc aaaacagata cagctcaagc cccttatgtt tcgttgcgtt caaccaaagc
     7801 accggggcat acgtttaccc caattatgaa aagacctgat gctaaagtag aagatcatac
     7861 ggctgatgtc ttttcggcta agcaggcaaa agaattccaa tttactccaa gttcagaagc
     7921 tacagaagca gtagagccgg ataataccat tcattcggtt gaagaaagtg tatcaaccgc
     7981 atcttttaac gcggttgaag cacaagaaaa tgtggaaaaa gaagtggtta aacctgcacc
     8041 cgagagtttc actactgagc gtattattcc aaatgcggca acagctgccg cagcagccac
     8101 tgcggcagct gcagccacta aaaccaaaga gattaaagct aaaatgccac ctaaaacccg
     8161 ccgtttatta ttagtggcat tgttggcgtt agcattattg gtactgtttt tcttgttaaa
     8221 accaagtacg ccggaaactg tcgaagagct acaatctcag caaggtggta gcttgccgat
     8281 tgaattccga ccggttgatg aagctgaagc gaaacgtgcg gaagaacaag ctcgtgcaga
     8341 acaagaagcc gctgaagctg caaaagctca agaacaagct caagccgctc aacaagagtc
     8401 tgtaacagtt gctccagccc aaaccgagca aacaatggct aaaccgtcac aagatagcca
     8461 gtcgcaaaca caatcacaag cagtagttga gcaacctgtt gcggtgaaac cggtggaaaa
     8521 taaaccggtt gttgcacaac cggcgattaa gcctaaaacg gaaaatagcg tggtgttcca
     8581 acctgaaaca acggtaaaac aacagcctaa agcccctgct aaaactgaag tgaaaaccga
     8641 acgtgctaca ctggcagcaa aagaaacggc aaaaacagca gctaaaccag ttgagaaagc
     8701 tccgacaaaa actgaagcgg taaaagcagc accggctgcc gagtcggcaa atgcggtagc
     8761 aaccaaaaca atgactgtgc caaaaggtgt atcactaatg caagtgttcc gtgataacaa
     8821 tttaaatatc tcagacgtta atgcgatgag caaagtcaat aacgtggtga gtaatttaaa
     8881 agtaggcgag cgagtaaccg ttcgtttaga taaaaataac cgtgtggttg aaatgagcat
     8941 tggctcaggc ggcaaattta cccgtcaagc aaacggtagc tatactttta aataaataaa
     9001 atgaagaaaa agagcaacgc tacaaacgtt gctcttttat ttaaaaagga gataaaggat
     9061 gaatttattt tgcccctctt acaaacttat ctacttaacg ctaagctcag cgatgttagt
     9121 tgcttgtagt acagtggtta cccctgttga gcaaattcat caagtacaaa aggaaaaaga
     9181 gtcagtaaag aaagtgacta aactgatagc acaagcacct aaagtgagtt tatatcgttg
     9241 tgagaatgat aagaaggttg aagttgaacg ccagggacga acaaaaaaag cgttaaaaaa
     9301 ggaaatagtc acagtgagtt atcaagggac aacgcatcag ctttcacctt ctgtaacgag
     9361 agatggtaaa aaatacacta atatccgttg gacttggcat gaaacccgta gtggtaaagc
     9421 atttttgtat aacaacacta aaaaaacgtt agcggcaaat tgcataaagc agtaacaagc
     9481 ggacacaaaa agtatcgctt tttgaacgtt ggctttgcca acggcagcga agctgtgaac
     9541 aatccttaca aggattgtga ataaattttt aagagaattt tgcaaatgaa tattttagtt
     9601 ataggaccgt cttgggtggg tgatatgatg atgtcgcacg cactttatca acagcttaaa
     9661 atacagtatc cgaattgcca aattgatgta atggcacccg attggtgttg tccgctttta
     9721 gcccgtatgc ctgaggtgcg taatgcgatt tcaatgccga ttggacacgg ttcatttcgt
     9781 ttgtgtgaac gctaccgact cggaaaatcc ctgagaaatc aatatgatat ggcgattgta
     9841 ttgcctaatt cattaaagtc tgcctttatt ccactgtttg cgaaaattgc gagacgtcgt
     9901 ggttggaaag gggaaagtag atattttttc ttaaatgatc ttcgcagtaa taaaaacgac
     9961 tacccaatga tggtgcaacg ctatgtagcc ttggcgtttg aaaaggctac tgttccaacc
    10021 gcacaacagt tgccgattgc ttatccatac ctcacaactg atagcgaaca aattgagcag
    10081 accaaagcga aatttgaaaa acagttggct tatgcggaaa accgtcctgc catcggcttt
    10141 tgtccagggg ctgaatttgg accggcaaaa cgttggccgc attatcatta tgcaatattg
    10201 gcaaaaatgt tgattgagca aggctattcg gtacggttat ttggctcgaa aaaagatgaa
    10261 gccgccggtg agcaaattcg cttggcatta cctgaaaatt tacaacgcta ttgcctgaat
    10321 ttagccgggc aaaccgattt aaaccaagcg gtagatttga ttgcagattg taatgcagtc
    10381 gtgagcaatg actccggctt aatgcacatt gccgcagcac taaataaacc gctggtcgcc
    10441 ttatatggac cgaccagccc acaatatacg ccgccgttat cccaaaatgc cgagatcatg
    10501 cgcttaattg aaggcggttt gattaaaatc cgcaaaggcg aaggggcaga gggctatcac
    10561 caaagtttaa ttgatattca gcctgaaatg gtgatggaca aattagctga actgttagtt
    10621 taaatggata acaagcggtt gaatttgcca attttttgca aaaaaagacc gcttgtttgt
    10681 ttataaaaga tgaaaatttt aatcgttaaa acctcatcaa tgggagatgt attacatacg
    10741 cttccagcca taaccgatat gcaaaatgct attcccgatt taaaagtaga ttgggtggtg
    10801 gaggagaatt ttaccgaaat tcctgcgtgg cattcagcgg taaataaagt aattccggtg
    10861 gctattcgcc gctggcggaa aaacctttgc caaagacaga cttgggtaga atgccagcag
    10921 tttttaaaac agctaaaaag tgagcagtat gatgcggtaa ttgatgctca agggctgatt
    10981 aaaagtgcgg tgttagtaac tcgccaagcc aaaggcaaaa aatttggcta tgataaaaac
    11041 tctgcccgag aagggttaag tagtctgttt tacgatgaaa cgtttaatat cccctaccaa
    11101 caacacgctg tagaacgcat cagaaaatta tgtgcaaaat cattaggtta tgctttgcca
    11161 accgaacggg gcgattattg cattgcacaa cattttgcaa aaaatcctca aaaaacgacc
    11221 gcttacatta tgctgattca cgccactacc cgagcggata aacattggca agaagcctat
    11281 tgggcggagt tgattcaagc gttggataag cacaatctgg cagtcagatt gccttgggga
    11341 aaccaagccg aaaaagaacg ggcggagcgt ttagcgagtg tggcgaataa tgctaaggta
    11401 ttgccaaaaa tgagcttaac cgatattgct actcaacttg cgggagcagc ggcagtggtg
    11461 tcggtggata ccggcttgag ccatttggcg gctgcgttag ataagccaaa tgtgatttta
    11521 tatggggcaa ccgatccaaa acttatcggg gcttacgggc aaaatcagtt ttatctaaaa
    11581 gcagataaaa tggaaaatat tacctcttca caagtgctag aaaaattact tccattgatt
    11641 aacaaatgat cattgttgtt ctcttactgt gcttgacttt tatccacgtt caatttagaa
    11701 ttcaccgtcc tttcgtgtga aaggatgttt ttaattttat ttttaataat tttaactgga
    11761 gcttttttaa tggcaactat caaccagcta gtacgcaaac cgcgtgtgaa aaaggttgta
    11821 aaaagtaacg ttcctgcatt agaggcttgc ccgcagaaac gtggcgtgtg tactcgtgta
    11881 tacactacta cacctaaaaa accgaactca gcattacgta aagtatgtcg tattcgttta
    11941 acaaatggct ttgaagtaac ttcatacatc ggtggtgaag gtcacaacct tcaagaacac
    12001 agtgttgtat taatccgtgg tggtcgtgtt aaagacttac cgggtgttcg ttaccatact
    12061 gtacgtggtg cacttgactg tgcaggcgtt aaagatcgta aacaaggtcg ttctaaatac
    12121 ggcgttaaac gtcctaaagc ttaatggttc tccgttgagt aaggccaaac gtctaaattt
    12181 taatatttaa accataaact ccagtcaaga tgccttaagg cagattagat gagttttgga
    12241 tatcctgaag atttaatata cggagaaatt tccaatgcca cgtcgtcgta gtattgaacc
    12301 acgcaaaatt cttccagatc cgaagttcgg ttcagaatta cttgcaaaat ttattaacgt
    12361 gttaatggta gatggtaaaa aatctactgc agaaaaaatc gtttacggtg cattagaaac
    12421 tttaacacaa cgttctggta aagaagcgtt agaagctttc gaaatcgcat tagaaaacgt
    12481 acgtccaact gttgaggtta aatctcgccg tgtgggtggt tctacttacc aagttcctgt
    12541 agaagttcgc ccaacccgtc gtaatgcttt agcaatgcgt tggatcgtag aagccgctcg
    12601 taaacgtggt gacaaatcaa tggcattacg tttagctaac gaattatcag atgcagcaga
    12661 caacaaaggt tcagcagtga agaaacgtga agacgttcac cgtatggctg aagctaacaa
    12721 agcgtttgct cacttccgtt ggtaatcgtt taagcaaact tatcaaaggc ttcatctcag
    12781 tttgcggtga agccttaccc ttattaagaa ttttaattta aaccccaaac aaggtaataa
    12841 ataaaaatgg ctcgtacaac ccctatttca ctttaccgta acatcggtat cagtgcgcac
    12901 atcgatgcgg gtaaaacaac tactacagag cgtatcttgt tctatacagg tgtaagtcac
    12961 aaaatcggtg aagttcacga tggtgctgca acaatggact ggatggaaca agaacaagag
    13021 cgtggtatca cgatcacatc tgctgcaaca acagcattct ggtctggtat gtcacaacaa
    13081 tatccacaac accgtatcaa cgttattgat actccgggac acgttgactt tactatcgaa
    13141 gtagaacgtt caatgcgtgt acttgatggt gcggtgatgg tttattgtgc agttggtggt
    13201 gttcaaccac aatctgaaac tgtatggcgt caagctaaca aatataaagt gccacgtatc
    13261 gcgttcgtaa acaaaatgga ccgtacaggt gcaaacttct tacgtgttgt tgagcaaatc
    13321 aaaacgcgtt taggtggtaa ctcagttgca ttacaacttc caatcggtgc agaagacagc
    13381 ttcaaaggtg ttgttgattt aatcaaaatg aaagcaatca actggaacga agctgatcaa
    13441 ggtatgacct tcacttatga agatattccg gcagatatgc ttgaagcttg tgaagaacac
    13501 cgtgcaatgc ttgttgaagc agcagctgaa gcttctgaag aattaatgga aaaattcttc
    13561 tctggtgaag aattaactga agatgaaatc aaagcagcat tacgtcaacg tgtattagca
    13621 ggtgaagtaa tccctgtttg ctgtggttct gcatttaaaa acaaaggtgt acaagcaatg
    13681 cttgatgcgg taatcgatta cttaccggca ccaactgata ttcctgcaat taaaggtatc
    13741 aatgaagatg aaactgaagg tgagcgtcac gcaagcgacg atgagccatt tgcttcatta
    13801 gcattcaaaa ttgcaacaga cccattcgta ggtaacttaa ccttcttccg tgtttactct
    13861 ggtgtaatta actctggtga tacagtttac aactcagtaa aacaaaaacg tgaacgtttt
    13921 ggtcgtatcg tacagatgca cgcaaacaaa cgtgaagaga tcaaagaagt tcgtgcgggc
    13981 gatatcgctg cagcaatcgg tttaaaagat gttggtacag gtgacacatt atgtgcaatc
    14041 gatgcaccaa tcattcttga gcgtatggaa ttccctgagc cggtaatctc tgttgcggtt
    14101 gaaccaaaaa ccaaagctga ccaagagaaa atgggcttag ctttaggtcg tttagcacaa
    14161 gaagaccctt cattccgtgt tcacacagat gaagaatctg gtgaaacgat catttcaggt
    14221 atgggtgagt tacacttaga catcatcgtt gaccgtatga aacgtgagtt taaagtggaa
    14281 gcaaatatcg gtaaaccaca agtatcttac cgtgaaacta tccgtactcg tgttaatgat
    14341 gttgaaggta aacacgcaaa acaatctggt ggtcgtggtc aatatggtca cgttgtgatc
    14401 gacttatacc cattagatgc tgaaggtccg ggttatgagt ttgtaaacga gatcaaaggt
    14461 ggtgtaatcc ctggtgaata cattcctgcg gttgataaag gtatccaaga acagcttaaa
    14521 tctggtccgt tagcaggtta cccggtagta gatttaggtg tgcgtttaca cttcggttca
    14581 taccacgatg ttgactcatc tgaacttgcg tttaaacttg ctgcatcatt agcatttaaa
    14641 gcggcgttcg caaaagcaag cccggtatta cttgagccaa tcatgaaagt ggaagttgaa
    14701 actccaccgg attacgtggg tgatgtaatc ggtgacttaa gccgtcgtcg tgcaatggtt
    14761 aacggtcaag aagcgaacga gttcgttgtt aagatcaatg ctgaagttcc actttcagaa
    14821 atgtttggtt atgcaacaga cttacgttca caaactcaag gtcgtgcatc atactctatg
    14881 gaacctttaa aatatgctga agcaccgaaa aacgttgctg atgcaattat tgaagctcgt
    14941 agaaaataat ttgtttaacc tgagccatag caatagggct atggctcatt ttttaggaag
    15001 atattaaagt gtctaaagaa aaatttgaac gtacaaaacc gcacgttaat gtgggtacaa
    15061 tcggccacgt tgaccatggt aaaacaactt taacagcagc aatcactacc gtattagcaa
    15121 aacacttcgg tggtgcagct cgtgcatttg accaaatcga taacgcgcca gaagaaaaag
    15181 cgcgtggtat caccatcaac acttcacacg ttgagtacga tacagcaact cgtcactacg
    15241 cacacgttga ctgcccggga cacgcggact atgttaaaaa catgattacc ggtgcggcac
    15301 aaatggacgg cgctatctta gtagtagcag caactgacgg tccaatgcca caaactcgtg
    15361 agcacatctt attaggtcgc caagtaggtg taccatacat catcgtattc ttaaacaaat
    15421 gcgacatggt agatgacgaa gagttattag aattagttga gatggaagtg cgtgaacttc
    15481 tttcacaata cgacttccca ggtgatgaca ctccaatcgt acgtggttca gcgttacaag
    15541 cgttaaacgg cgtagcagag tgggaagaga aaatccttga attagcaaac cacttagaca
    15601 catacattcc agagcctgag cgtgcgattg ataaaccatt cttattacca atcgaagacg
    15661 tattctcaat ttcaggtcgt ggtacagtag taacaggtcg tgttgagcgt ggtatcatcc
    15721 gcactggtga tgaagttgaa atcgtaggta tcaaagatac agcgaaaaca accgtaacag
    15781 gtgttgagat gttccgtaaa ttattagacg aaggtcgtgc gggtgagaac gtaggtgcat
    15841 tattacgtgg tactaaacgt gaagaaatcg aacgtggtca agtattagcg aaaccgggtt
    15901 caatcactcc acacacagac ttcgaatcag aagtttacgt attatcaaaa gaagaaggtg
    15961 gtcgtcacac tccattcttc aaaggttacc gtccacagtt ctacttccgt acaacggacg
    16021 taacaggtac aatcgaatta ccggaaggtg tagagatggt aatgccgggc gacaacatca
    16081 aaatgactgt tagcctaatt cacccaatcg cgatggacga aggtttacgt tttgcgattc
    16141 gtgaaggtgg tcgtacagta ggtgcgggcg ttgtagctaa aatcatcaaa taattaagat
    16201 tgtttgataa attgaaaagc taaataaaaa ctagaaagag gcatatcgaa aggtatgcct
    16261 cttttgcttt tatgccgatt aagctagcca tatc
//
LOCUS       DANLTI010000053        16203 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.053, whole genome shotgun sequence.
ACCESSION   DANLTI010000053 DANLTI010000000
VERSION     DANLTI010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16203
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.053"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..277
                     /locus_tag="PXB09_001317"
     CDS             <1..277
                     /locus_tag="PXB09_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233442.1"
                     /translation="NLDEWYSASDKERREFIAKHFAEETVRSDRNTPYDYAMCTGRMF
                     AKQLTRDEVKDYPLANTKPQYLTRDRRIEIMSNLPREILQNCAKYIQ"
     gene            complement(313..1065)
                     /locus_tag="PXB09_001318"
     CDS             complement(313..1065)
                     /locus_tag="PXB09_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDL5233443.1"
                     /translation="MAYKPPFTVTTKMLNLVVEISHKLGTLQLDFERNLHLRKNNRLR
                     SIQASLAIEANSLTIEQVTAIIKGKKVLGHPKDIREVKNAYDAYDEMMHYNPYSIKDF
                     LKAHKFLTADLVNDAGAFRSKDVGIYNFSGQLVHMGARPQFVENLINELFSWAKQDDT
                     PALIKSSVMHYEIEMIHPFSDGNGRMGRLWQNVLLAQWNPLFAWLPIETMVYENQQRY
                     YQMLSLADSQNDSTGFIEFMLEMILETLLKLK"
     gene            complement(1104..2351)
                     /gene="clpX"
                     /locus_tag="PXB09_001319"
     CDS             complement(1104..2351)
                     /gene="clpX"
                     /locus_tag="PXB09_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDL5233444.1"
                     /translation="MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHG
                     EEEPLIDENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRSA
                     LSNHQATNGVELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGE
                     DVENVIQKLLMKCDFEAEQAERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKL
                     LEGTVANINPQGGRKHPKGETIPVDTSKILFICGGAFAGLDKIVEARTNTQGGIGFAA
                     ALKKDKDRQDLTELFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPK
                     NAIIKQYQALFEMEGVELHFTKDALISIAQKAISRKTGARGLRSIVENLLLDTMYDLP
                     TLNAKKVTIGKGCVENGDKPKVE"
     gene            complement(2351..2944)
                     /gene="clpP"
                     /locus_tag="PXB09_001320"
     CDS             complement(2351..2944)
                     /gene="clpP"
                     /locus_tag="PXB09_001320"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDL5233445.1"
                     /translation="MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLI
                     VAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAF
                     LLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQ
                     SYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSEVA"
     gene            3056..3439
                     /locus_tag="PXB09_001321"
     CDS             3056..3439
                     /locus_tag="PXB09_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDL5233446.1"
                     /translation="MTLTEIYQKFERCKSWEERYRLLIQLSRLLPKPSEQELAQIAEI
                     EGCESRLWFEFQAEPRKVVAYSDARLMQGILFIVSVALTEKTAEELKGFDLKTMFDEL
                     KISQNLTSTRLNGLGQLQKHIMMNL"
     gene            complement(3543..3619)
                     /locus_tag="PXB09_001322"
     tRNA            complement(3543..3619)
                     /locus_tag="PXB09_001322"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3583..3585),aa:Asp,seq:gtc)
     gene            complement(3708..4463)
                     /locus_tag="PXB09_001323"
     CDS             complement(3708..4463)
                     /locus_tag="PXB09_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5233447.1"
                     /translation="MKKSIYDTPIFFERYQQLRQNPISMNEVVEKPTMFSLLPDLTGK
                     KVLDLGCGTGVHLAHYLTLGAEKVVGLDLSELMLQQAESDLSAHWQKGNDFSLYCLPM
                     ERLNEISEGDFDVVTSSFAFHYIADFSELLAKISQKMTACGTLIFSQEHPIVTCYREG
                     YRWEKNQEKQQVAYRLNYYREEGERDRSWFQQPFKTYHRTMATIVNNLIQGGFEIVQM
                     EEPMLAGQPRWHNEFKDLQHRPPLLFIKAIKQK"
     gene            complement(4523..5518)
                     /gene="trpD"
                     /locus_tag="PXB09_001324"
     CDS             complement(4523..5518)
                     /gene="trpD"
                     /locus_tag="PXB09_001324"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDL5233448.1"
                     /translation="MQALLDKLFANQALAQAESHRFFSEVIKGNVSNEQLAAALIALK
                     LRGETVDEIAGAAKAALENANPFSTPDYPFADIVGTGGDGHNTINISTTSAIVAATMG
                     YKIAKHGNRSVSSKTGSSDVLSHLGINVDVSPETARLALDETNICFLFAPTYHSGFKY
                     AAPVRQALKTRTIFNILGPLVNPAHAKRQLLGVYSPELVKVYAETVKALGYEHTIVVY
                     GAGLDEVAVHGETQVAEIQNGQIDYYTLTPEDFGIERHSLEDLKGGEPAENAEKVTAI
                     LQGKGKLAHIDAVAANVALLMKTFGEDDLKANVQKVKETLESGKALETLRKLSTY"
     gene            complement(5536..5922)
                     /locus_tag="PXB09_001325"
     CDS             complement(5536..5922)
                     /locus_tag="PXB09_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005543439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDL5233449.1"
                     /translation="MISVYGLKQTLADRRALIADVIFDCMQMSLGVPKQRHALRFDLL
                     DAENFYPPINRSQDFIVIEINLMQGRSEQLKKRLIKGLFSALHTKVGIVPMDVEITIK
                     EQPEHCWGFRGMTGNEATDLEYQAHR"
     gene            complement(5915..6505)
                     /locus_tag="PXB09_001326"
     CDS             complement(5915..6505)
                     /locus_tag="PXB09_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDL5233450.1"
                     /translation="MANILFIDNFDSFTYNLVDQFRELGHQVTIFRNDYPLEDFLAKA
                     ETTENCLVALSPGPGNPAEAGNLLEIIRRLKDKVPMIGICLGHQALIEAFGGKVVHTG
                     TVLHGKVSRIEHDNQAMFSGINNPMLVARYHSLMGDELPAEFIVNAKFEHIVMAIRHK
                     TLPICGFQFHPESILTVQGTKLLKQSVEWLLGEKND"
     gene            complement(6515..8071)
                     /gene="trpE"
                     /locus_tag="PXB09_001327"
     CDS             complement(6515..8071)
                     /gene="trpE"
                     /locus_tag="PXB09_001327"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDL5233451.1"
                     /translation="MPQLTITQTELPYFADTTRVYYALCGERPHTLLLDSAEIQSKNS
                     VKSLLFAKSAVHIFCEDQTVTFHALTPNGEAVLPLIANALSLLNPAPTCKFLDKNDRL
                     QAIFPTISNQLDEDSKLKTTTVFDGLRTVSQLFADSTSPIYLGGLFSYDLVANFIPME
                     NISLQDDGLSCPDYTFYLAEQLVTIDHQTETAVLNTFCFEPNEQTNLNQQAVEFTQKL
                     ANLSHIELPLANQTATSEATANIEDEDFKAIIRKLKHHINIGDVFQIVPSRRFSLPCP
                     NTLASYKQLKINNPSPYMFYMQGENFTLFGASPESALKYSQANRQLEIYPIAGSRPRG
                     FDEQGNIDPELDSRLELELRLDQKELAEHLMLVDLARNDVARVSESGTRRVVDLMQID
                     RYSQIMHLVSRVIGTLRKDLDALHAYQACMNMGTLTGAPKIKAMQLIYQVEQQKRHSY
                     GGAVGYLTSDGNLDTCIVIRSAFVQNGIAYVQAGCGEVLDSDPQLEADETRHKARAVL
                     KAIGQVNAKA"
     gene            8213..8830
                     /locus_tag="PXB09_001328"
     CDS             8213..8830
                     /locus_tag="PXB09_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDL5233452.1"
                     /translation="MTQFFYIHPDNPQQRLINQAVEIIRNGGVIVYPTDSGYALGCAM
                     GDKHAMDRIVAIRKLPENHNFTLVCSDLSELSIYALVNNQAYRLIKNNTPNPYTFILP
                     ATKELPRRLMTKRKTVGIRVPDNAIALALISALGEPILSCSLMLPETEMTESDPDEIR
                     DHLQNRVDLIIHGGYLGQQPTTVVDLTDDVPVIIREGSGDPTSFN"
     gene            8976..10043
                     /gene="rluB"
                     /locus_tag="PXB09_001329"
     CDS             8976..10043
                     /gene="rluB"
                     /locus_tag="PXB09_001329"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDL5233453.1"
                     /translation="MTTFQKKSTATFRADKRGESRPSFKKEEQKSERKFGKTSEKPPR
                     PTSKPLTQRIAKKVEKTTASEVASQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAG
                     RVSVDGKMATLGDRVQVSSSTKIRIDGHLVNLMPAQKEICRVLMYYKPEGELCTRSDP
                     EGRSTVFDRLPRLSGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVR
                     VFGNIDDAMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWE
                     SQGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPPETETKVEVGVN
                     RRRTNIRQIRKAVKQHQKYRG"
     gene            10109..11881
                     /locus_tag="PXB09_001330"
     CDS             10109..11881
                     /locus_tag="PXB09_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDL5233454.1"
                     /translation="MSWDIVATLAVTGIAVFLFATEKMRMDVVAILVLCSLVLLGQVD
                     TKSALSGFSNSATVTVTAMFVLAAGLQNSGALDSVGSLLAKVKSPWLFLLVLCGVNAA
                     VSPFVNNTAVVAVLIPIVIAAAQNIKMAPSKALIPLSFSSQMAGVCTLIGTSTNLLVN
                     AIAQKQGHSGFGMFEFAPLGIIFLVVGVAYLLVTSRFLLPESHLQLEDGEGFGKYVSE
                     LKVNKDSVLIGKSTFESGLNEEFNLFTIGVLRDGERLSTPSHQVLQKHDILLLRGESE
                     NLAKVREKYGLHHVVYGRRENDEDNLDEDLMVAEVMISPISRWIGGTIPILQQRWNKN
                     ATVLGIQRQSKVIRERLRTTAFKMGDILLLTLPKEDMETLRQDKDFIVLSSDLVKTEE
                     SWKSKFALGVMVLVVATAALGWVPISVSALIGAVAMCVAGCLTAEEAYQSIDWKIILV
                     LAGLLPLGEAMANSGAAQFIVDNTLGKVGEFGPLVVLAVLYLLTMVLTEFMSNAGTAV
                     LLTPIAVSTAKMLGVDASPFIIAVMFAAATSFMTPVGYQTNTMVYGAGGYKFTDFIKI
                     GLPLNVIYWILGIVLIPIFFPFNP"
     gene            complement(11971..16122)
                     /locus_tag="PXB09_001331"
     CDS             complement(11971..16122)
                     /locus_tag="PXB09_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5233455.1"
                     /translation="MNKIYRIVWNHAKRTWIVASELSRSANKSNATNTSLTTNIIKLS
                     TLSLALSAGFASAATYSPTYGTIPDNNPQTSIAIGDGSKVNSTLVSTITGLEGNSGKV
                     STALGYNTTATADFSTALGGFANASFASTAVGGQATADKRSVAVGYNATAMGLREVFI
                     GDHAGLNHSNSTEYNIGIGYSASSNVTGNNTISIGNTAGDGTSGSHNIAIGTYANAKL
                     AGPTTNVTSDDNIAIGNSALANGVNNYKTTAATGETVIGKATAVGSHANATGIVSSAY
                     GAEANATAIHSTAIGAKSQANGDNSTAIGYEAKTSGHGATSLGYYANATANLTTAVGT
                     NAGATSDYASAFGREANASGGSATALGNRATASGAASVALGVSAKATNQRTIAIGESS
                     NASAFNATAIGRNATAEHTDSIALGSNSVTAIAIPTTNATVNGITYSDFAGTNPIATV
                     SIGAEGKERTITNVAAGRISLSSTDTINGSQLYLTQQAIGNVAATTANILGGGAAVTE
                     NGNITFPTYALVNGTPDADKEGKQGRYTTVSAALSALNTAVISPLTFAGDTGTNFERH
                     LGSTVKIKGGSTGILTENNIGVVADGNSTLTIKLAEKVNLGANGSLTTGDTVVNNTGI
                     TIANGVADKPVSLTKSGLDNGGNKIANVAAGDVDTDAVNVSQLKQAISKFATHYVSIS
                     DDGIQRANYDNSGSSGVNPMAIGVATSANGELATALGSEAEANGERTTAVGPRATADG
                     MNATSIGYNANANATNALAVGSAANANADTSTAIGTASTATATRATALGSKSEATGEN
                     STAVGYEASSIGADSLAAGYNANASGTQSTALGNSANAGGIWSTSVGRNANAAGSSAI
                     ALGNSANAAGVASIALGVSSQATTTAAVALGQNAKATHQGSVALGTNSETVATVATKS
                     ATLNGNTYTFAGTTPSSTVSIGSVGNERTLTNVAAGRILDSSTDAINGSQLYAAYTEI
                     DGLNTKVNELSNGALTFVDDAGTEIVRKLGTSLNVKGGADATILTDNNIGVVATDANT
                     LTVKLAKDIDLTPAGSVAVGNSKLNNNGLTINNGPSVTMTGVDAGKLKITNVADGDIS
                     PISADAVNGSQLYDTANTIATALGGNSSVNANGAVSAPSYTVVDGAPTNEVSKTVNNV
                     GSAITALNDAVTSPLTFAGDTGTPSQRKLGSTVTVKGGVSNESQLTDNNIGVISNGNG
                     SLTVKLAKDIKVNSVTAQTVTANIAVADTVKTGDTTIDTNGLTIVGGPSITKTGINAA
                     GTKVTNVKAGTEDTDAVNFSQLKATEKNINNKINNIDSKVNKVDKRLRAGIAGATATA
                     GLPQAYLPGKSMLATAGDTYRNEAAIAVGYSRISDNGKVIYKLTGNSNTRGDFGGSIG
                     MGYQW"
BASE COUNT         4463 a         3298 c         3467 g         4975 t
ORIGIN      
        1 taatttagat gagtggtact cagcttcaga taaagagcga agagaattta tcgcaaaaca
       61 ttttgcagaa gaaacagtaa gaagtgatag aaatacaccg tatgattatg ctatgtgcac
      121 tggtagaatg tttgctaaac aactgactcg agatgaagtc aaagactacc ctttggcaaa
      181 cactaagccg caatatttaa cccgtgatag acggattgag attatgtcta atttacctcg
      241 tgaaatatta caaaattgtg ctaaatacat acagtaattt tatgagtaac accactttgg
      301 aattaagtgg tgttatttta attttaataa tgtctctaaa atcatctcca acataaactc
      361 aataaagccg gtagaatcat tttggctgtc tgcgagagaa agcatttgat aataacgttg
      421 ttgattttcg taaaccattg tttcaatcgg caaccaagcg aaaagtgggt tccattgtgc
      481 taaaaggaca ttttgccata atcgacccat tctgccgttt ccatcactaa aggggtgaat
      541 catttctatt tcatagtgca taaccgagct tttaatgagt gcaggtgtat catcttgttt
      601 agcccaagag aacaactcat taatcaaatt ctctacgaat tgaggacgag cccccatatg
      661 cacaagttgc ccactgaaat tataaatgcc gacatctttt gaacgaaaag cccctgcgtc
      721 atttactaag tcagcagtaa gaaacttatg tgctttgaga aaatctttaa tcgagtaagg
      781 attatagtgc atcatttcat cgtaagcgtc ataggcattt ttgacttcac gaatatcttt
      841 ggggtgtccg agaacctttt tgcccttaat gattgcggta acttgctcaa tcgttaatga
      901 atttgcctca atagctaaag aggcttgaat tgatctcaag cggttatttt ttctaagatg
      961 taaattacgc tcaaaatcca attgtagcgt tcccaattta tgagaaattt ctacaaccag
     1021 attcagcatt ttagtggtaa ctgtaaaagg tggtttataa gccattttgc aataatccta
     1081 aaaaattaaa ccgcttgtca ttgttactcc accttcggct tatcgccgtt ttcaacacag
     1141 cctttgccga tggtgacttt tttcgcattg agggttggga gatcgtacat tgtgtcaagt
     1201 aataagttct cgacaataga acgtaaccca cgagccccgg ttttgcggct aatcgctttt
     1261 tgggcaattg aaattaatgc atctttggtg aagtgcaatt caacgccttc catttcgaat
     1321 aaggcttgat attgcttgat gatcgcattt ttcggctcgg ttaagatttg aatcagagct
     1381 tcttcgtcca attcttgcag cggagtcacc accggtaaac gcccgattaa ttcaggaatt
     1441 aagccgaatt tgactaaatc ttccggttca acttgtttga atagctcggt taaatcttgg
     1501 cgatctttat cttttttcaa tgccgctgca aaaccgatac caccttgagt gttggtacgg
     1561 gcttccacga ttttatctaa accggcaaaa gcaccgccgc aaataaagag aattttggag
     1621 gtgtccaccg gaatggtttc gcctttcggg tgtttgcgac cgccttgtgg gttaatgttc
     1681 gccaccgtgc cttcaagtag ttttaataag gcttgttgaa caccttcgcc cgatacatca
     1741 cgggtaatgg atgcactttc cgatttacgg gtgattttgt cgatttcatc aataaaaaca
     1801 atgcctcgtt ccgcttgttc ggcttcaaaa tcgcatttca ttaataattt ttgaatcacg
     1861 ttttcgacat cttctcccac atagcctgct tgggtaaggg tagtagcatc agctaccgca
     1921 aaaggtacgt ttaaacggcg ggcaagggtt tctgccaaca aggttttacc gctaccggtc
     1981 ggcccgatta ataaaatatt acttttacct aactctacgc cattagtggc ttgatggttt
     2041 gacaatgcac ttcttaagcg tttgtagtgg ttataaacgg ccaccgaaag cacttttttc
     2101 gcgtgttctt gaccgatgac ataatcatct aaatgagcgt gtaattcgtg aggtgtcggc
     2161 acattggtga aaaaactgcc ttcatcgtct tggttttcat caattaacgg ctcttcttca
     2221 ccgtgtaata aggcgtagga ttcctcgata cattcattac aaatatagcc ttccgtgcct
     2281 tcgactaatt gatcgacttc ggtacgtttt ttaccgcaaa aactacagtg gggttctttt
     2341 tcaaatgcca ttacgccacc tcactgcgag aagttaatac tttgtcgatt aagccatact
     2401 cagcggcttc ttccgcagac ataaaattat cacgctcggt atcggctaac actttttcat
     2461 agctctgacc gctgtgttct gccatacggc gggtaagggt agctttcaag cgtaaaattt
     2521 cttccgcttg aatttgaata tcggttgctt gacctctcgc tccacctaaa ggttggtgaa
     2581 tcataatacg agcgtgcggc agagcaaagc gtttaccttt tgccccggct gaaagcaaaa
     2641 atgcccccat tgaagccgct tgccctgtgc aaagggttgc tacatcgggt ttgatgaagt
     2701 tcattgtatc gtaaattgcc aagcctgctg ttaccacgcc acccggtgag ttaatgtata
     2761 aatagatgtc tttttccgga tcttcggctt ctaaaaacag aagttgtgcc acaatcaggt
     2821 ttgccatatt gtcttccacc tgaccgttta aaaaaataat acgttctttt aataaacgtg
     2881 aataaatgtc gtaagaacgt tcgccttttg aggtctgttc caccaccatt gggactaatg
     2941 ccattttgtt ttcctctgtc gtaatacaaa atctcgctat tctagcaaat tttcagaaaa
     3001 tcattaacaa caagcggtca gattgttaaa atcttttgca aatgatgagg aaattatgac
     3061 attaacagaa atttaccaaa aatttgaacg ttgtaaatcg tgggaagaaa gataccgctt
     3121 gttaattcag ctaagtcgct tgttaccaaa accaagtgag caagagttgg cacaaatagc
     3181 ggaaattgag ggctgtgaaa gccgtttatg gtttgaattt caagctgagc cacgaaaagt
     3241 agtggcatat agcgatgccc gtttaatgca ggggatttta tttattgtga gtgtagcttt
     3301 aactgaaaaa acggcagaag agctgaaagg ctttgactta aaaacgatgt ttgatgagct
     3361 aaaaatttca caaaatttaa ccagcacaag gttaaatggg ttgggtcagt tacagaaaca
     3421 tataatgatg aatttgtaat tcaccctcgc cccttgtggg agagggtgaa taaaatccgc
     3481 aggattttat tcgggagagg ggaatataaa aaacctctga tttctcagag gcttaaattt
     3541 gttggcggaa cggacgggac tcgaacccgc gaccccctgc gtgacaggca ggtattctaa
     3601 ccagctgaac taccgctcca tactggtgct aaaataatag tggtttcctc aacattgagc
     3661 aaatagtttt tgcaaaatag tgtttaattg gttgtaaaat aaccacttta tttctgcttg
     3721 atcgccttga taaacagcaa cggcggacgg tgctgtaaat ctttaaattc attgtgccac
     3781 cgaggttggc ctgccagcat tggttcttcc atttgcacaa tctcaaaccc gccttgaata
     3841 aggttattca caatggttgc cattgtgcgg tggtaggttt taaagggttg ttgaaaccaa
     3901 cttctgtccc gttcgccctc ttcccgataa tagttcaagc ggtaagcaac ttgttgtttt
     3961 tcttggtttt tctcccaacg atagccttct cggtaacagg tgacaatcgg gtgttcttgc
     4021 gagaaaatca gcgtgccaca agcagtcatt ttttgcgaaa tttttgcaag tagttcggaa
     4081 aaatcagcaa tataatgaaa cgcaaaagag ctggttacta catcgaaatc gccctcgctg
     4141 atctcattta atcgctccat cggcaggcag taaagggaaa aatcgttgcc tttttgccaa
     4201 tgagcagaaa gatcgctttc tgcctgttgt agcattaatt cagataaatc caaccccacc
     4261 actttttctg caccgagcgt taaataatgg gctaaatgaa ctcctgtgcc acaacctaaa
     4321 tccagcactt ttttgccggt taagtctggc agtagagaga acattgttgg cttttccacc
     4381 acttcattca tacttattgg attttgtcga agttgttggt aacgctcaaa gaaaatcgga
     4441 gtgtcgtaaa tgcttttttt cacttaatag cctttaaaca aatataaaat aaggcgggtt
     4501 aaaacccgcc actacgatat gattagtaag tcgataattt tcgcaaagtt tctaacgctt
     4561 ttccactctc aagcgtttct tttacttttt gcacattggc ttttaaatca tcttctccaa
     4621 aggttttcat taataatgcg acatttgctg ccaccgcatc aatatgagcc agtttacctt
     4681 ttccttgtaa aatagcggtt actttttcgg cattttctgc aggttcaccg cctttgagat
     4741 cttctaacga atggcgttca atgccgaaat cttccggcgt taaggtgtaa tagtcgatct
     4801 gtccgttttg aatttccgca acctgcgttt cgccgtgaac ggcaacttca tctaaacctg
     4861 caccgtatac cacaatagtg tgttcgtaac ctaaggcttt tacggtttca gcatagactt
     4921 tcactaactc aggggagtac acaccgagta attggcgttt agcgtgagcc gggtttacca
     4981 acggccctaa aatattgaaa atcgtgcggg tttttaaggc ttggcgaaca ggggcggcat
     5041 atttgaatcc gctgtggtag gttggggcaa acaaaaagca gatgttggtt tcatctaaag
     5101 caaggcgtgc cgtttcaggt gaaacgtcaa cattaatacc taaatggctt aatacatcgc
     5161 ttgagccggt tttacttgat acgctacggt tgccgtgttt ggcaatttta tagcccattg
     5221 tggcggcaac aatcgcactt gtggtagaaa tgttgatggt attatgccca tcgccacctg
     5281 tgccgacaat atccgcaaaa gggtaatcag gcgttgagaa cggattggca ttttcaagtg
     5341 cggcttttgc agcacctgca atttcatcaa cggtttcgcc acgcagtttt agagcgatta
     5401 aggcagcagc aagttgttca tttgatacat tgcctttaat aacttcacta aaaaaacggt
     5461 gagattccgc ttgggctaag gcttggttgg cgaataattt atctaaaagt gcttgcatag
     5521 tctcttcctt tttaattagc gatgtgcctg atattccaaa tcggttgcct cgttgccggt
     5581 cattccacga aagccccagc aatgctctgg ctgttcttta atggtgattt caacgtccat
     5641 tggcacaatg ccgactttgg tgtgtaaggc actaaatagt cctttaatta agcgtttttt
     5701 gagctgttcg ctccgccctt gcatcaggtt tatttcaatc acaataaaat cttggctacg
     5761 gttaattggg ggatagaaat tttccgcatc caataagtca aaacgcaaag cgtggcgttg
     5821 ttttggtacg ccaaggctca tttgcataca gtcaaaaatc acgtctgcaa tcagggctct
     5881 gcggtctgct aaggtttgtt ttaatccata tacactaatc atttttttct cctaataacc
     5941 attccaccga ctgcttaagt aattttgtgc cttgcacggt taaaatggat tccgggtgga
     6001 actggaaacc gcaaatcggt aaggttttgt ggcgaattgc catcacaata tgttcaaatt
     6061 tcgcattaac gataaattct gccggtaatt catcgcccat taatgagtga taacgagcga
     6121 caagcattgg attgttaatg cctgaaaaca tcgcttggtt atcgtgttca atacgagaaa
     6181 ctttgccgtg caatactgtg ccggtatgca ctactttgcc gccaaaggcc tcaattagag
     6241 cttgatgtcc taaacaaatg ccaatcatcg gtactttgtc tttcagacgg cgaataattt
     6301 ccaataaatt gcctgcctca gccggattac ccgggccggg ggaaagggca accaaacaat
     6361 tttcggtggt ttcagctttg gctaaaaaat cctcaagcgg ataatcattg cggaaaatcg
     6421 ttacctgatg ccctaattca cgaaattgat cgaccaagtt ataggtaaaa gagtcgaaat
     6481 tatcaataaa aagaatattt gccatagttt gtccttatgc ttttgcattc acctgcccaa
     6541 tcgcttttaa caccgcgcgt gctttatggc gtgtttcatc tgcctctaat tgtggatcgg
     6601 aatccagcac ctcaccacaa ccagcttgca cataggcaat gccattttga acaaaggcgg
     6661 aacggatcac gatacaggta tctaaattgc cgtctgaggt taaatagccc accgcaccgc
     6721 cgtagctatg gcgtttttgt tgctcgactt ggtagatcag ttgcattgcc ttaattttcg
     6781 gagcaccagt tagcgttccc atattcatac aagcttgata agcgtgcaga gcgtcaagat
     6841 cttttctaag tgtgccgatc acacgagaaa ctaagtgcat aatttgcgaa tagcggtcaa
     6901 tttgcattaa atcaaccaca cggcgagtgc cggattcgct cacacgagcc acatcattgc
     6961 gggcaagatc gactaacatt aaatgttcgg caagctcttt ttggtctaaa cgcagttcta
     7021 attccaaacg ggaatctaat tcaggatcga tattaccttg ttcatcaaaa ccgcgtgggc
     7081 gagagccggc aatcgggtaa atttccaact ggcggttggc ttgcgaatat ttcaacgcac
     7141 tttcaggcga cgccccaaac agagtgaaat tttcgccctg catatagaac atatacgggc
     7201 ttggattgtt gattttgagc tgtttatagc tggcaagagt attcgggcaa ggcaagctga
     7261 aacggcgaga gggcacaatt tggaacacat caccgatatt aatatggtgt ttgagtttgc
     7321 ggataatcgc tttgaaatct tcatcttcaa tattggcggt tgcctcactc gttgcggttt
     7381 ggttcgctag aggcagctca atatgtgaca gatttgcaag tttttgcgta aattcgaccg
     7441 cttgttggtt caaattggtt tgttcattcg gttcaaaaca gaaggtgttt agcaccgcag
     7501 tttcggtttg gtggtcgatt gtaaccagtt gctctgctaa atagaaagtg taatctgggc
     7561 aacttaagcc atcatcttgc aggctgatat tttccatcgg aataaaattt gccaccaaat
     7621 cgtagctaaa taatccgccc aaatagatag gcgatgtgga atcagcaaac agttggctca
     7681 ccgttcttag cccgtcaaac acggtggtgg ttttgagctt gctgtcttca tctaactggt
     7741 tgctgatggt tgggaaaatc gcttgcaagc ggtcgttttt gtctaaaaat ttgcaagtcg
     7801 gagcagggtt taacaggctc aatgcgtttg caatcaaagg taaaaccgct tctccgtttg
     7861 gggttaaagc gtggaaagtc acggtttgat cttcacagaa aatatgcact gccgatttcg
     7921 caaacagcaa actttttaca ctgtttttac tttgaatttc cgctgaatct aataatagcg
     7981 tatgtgggcg ttcgccgcat aatgcgtaat aaacacgggt cgtatcggca aaatagggta
     8041 attctgtttg agtaatcgtt aattgaggca tagcaaattc ctattcaatt tttcgtacta
     8101 ttaaactagt acattaaaaa gaagtcaagc aattattcca gataattatg cgagcttggg
     8161 cgaacttggt gtataattag cccaattttt agaaagtcga aggcttgaga ctatgacaca
     8221 atttttttat atccaccccg acaacccaca gcaacgctta attaaccaag cggtagagat
     8281 tattcgaaac ggtggcgtaa ttgtttaccc taccgattca ggctatgctc tcggttgtgc
     8341 aatgggcgat aagcacgcaa tggatagaat tgtagcaatt cgtaaattgc cggaaaatca
     8401 caattttacc ttagtttgta gtgatttatc cgagctttct atctacgcgt tggtcaataa
     8461 tcaagcctat cgcttaatta agaataatac cccgaatcct tatactttta ttctgccggc
     8521 aactaaggaa cttcctcgca ggctgatgac aaagcgtaaa acagtgggga ttcgtgtgcc
     8581 ggataatgcg atcgcattgg cgttaatttc cgccttaggt gagccgattc tttcttgctc
     8641 gttaatgttg ccggagacgg aaatgaccga gtcagaccct gatgaaattc gggatcattt
     8701 gcaaaatcgg gtggatttaa ttatccacgg tggttattta gggcagcagc ctacaacggt
     8761 agttgactta accgatgacg tgccggttat tattcgagaa ggatcgggcg atccaacatc
     8821 gtttaattaa attgatgttg tatgattaat atatagaatt atgcgtaggg gggctgtgcc
     8881 agtccgtatt aatatcgtta tttggacagg cacaggacct gtccctacaa tgaaaatcaa
     8941 attcagacgc ttgtgaaagc gacaaaagga accttatgac aacttttcaa aaaaaatcaa
     9001 ctgcgacttt ccgtgcagac aaacgtggtg aaagccgtcc ctcatttaaa aaagaagagc
     9061 aaaaatctga acgcaaattt ggtaaaacgt cagaaaaacc accacgtcca acttctaagc
     9121 cattaacgca aagaattgca aaaaaagtgg aaaaaacgac cgctagtgaa gtggcatctc
     9181 aagagaaaaa agccaaagta gtaggtgaaa agctacaaaa aatcttagcg cgagcagggc
     9241 aaggttctcg ccgtgaatta gaagagatta tcgctgctgg acgagtgagc gtggacggta
     9301 aaatggctac tcttggtgat cgtgtgcagg ttagctcatc gactaaaatc cgcattgacg
     9361 gacatttagt taatttaatg ccggcacaaa aagagatctg ccgtgtatta atgtattaca
     9421 aaccggaagg ggaactttgc acccgttccg atccggaagg acgatccacc gtatttgacc
     9481 gcttgcctcg tttaagtggc gctcgttgga ttgcggtcgg gcggttagat attaacacct
     9541 caggcttatt attgttcact accgatggcg aattagccaa ccgtttaatg cacccaagcc
     9601 gtgaagtcga acgtgaatat tcggtgcgtg tgttcggcaa cattgacgat gcgatgttac
     9661 aacgcttacg caaaggcgtt cagttggaag acggaccggc aaactttaaa caaattaagg
     9721 ttgtgggtgg cacaggcttg aaccaatggt ttgatgtgac tttaaccgaa gggcgtaacc
     9781 gtgaggttcg ccgcctgtgg gaatcgcaag gggtagaagt cagccgtttg attcgtatcc
     9841 gttacggcaa tatcaaatta gataaaggct tacctcgtgg cggctgggaa gaaatgggct
     9901 tagaacaagt caattacttg cgtgagctgg tagggttacc gccggagact gaaactaaag
     9961 tggaagtggg ggtaaaccgc cgccgaacca atatccgtca aattcgtaaa gcggtaaaac
    10021 aacatcaaaa atatcgtggc taaacaccat ctttggggct gcattagttc tgctaatgca
    10081 gctattttct ttcaaaaaag gagcatttat gtcttgggat attgttgcaa cattggcggt
    10141 cactgggatt gccgtatttt tatttgcaac tgaaaaaatg cgaatggacg tagttgcgat
    10201 tttagtgctg tgttcattag tattattagg gcaggttgat accaaatctg ctctgagtgg
    10261 attttcaaac tcagctactg taaccgtaac tgcaatgttt gtattagctg ctggtttaca
    10321 aaatagtggt gctttagata gtgtaggcag tttacttgct aaggtaaaat ctccttggtt
    10381 attcttgctt gtactctgtg gcgtaaatgc tgctgtttct ccttttgtga ataatacggc
    10441 agtggtcgca gtattaattc cgattgtgat tgccgcagca cagaatataa aaatggctcc
    10501 ttccaaagcc cttattccgt tatcattttc ttctcaaatg gcaggtgttt gtacactgat
    10561 cggcacttcc actaatctat tagttaatgc aatcgctcaa aagcaagggc attccggttt
    10621 cggtatgttt gaatttgccc ctttggggat tattttttta gtggttgggg ttgcctattt
    10681 attagtgacc agccgtttct tattacccga atcacatttg caacttgaag atggtgaggg
    10741 gtttggaaaa tatgtttctg aacttaaagt aaataaagac tctgtattaa ttggcaaaag
    10801 tacatttgaa tcaggattaa atgaagaatt taatctattt actattggtg ttttgcgtga
    10861 tggggaaaga ttatcgacac cgagtcatca agtattgcaa aaacatgata ttttattgtt
    10921 gcggggtgaa tcggaaaatt tagcaaaagt acgagaaaaa tatggattgc accacgttgt
    10981 gtatggacgc cgtgagaatg atgaagataa tctggatgaa gacttgatgg tggctgaagt
    11041 gatgatttct cctatttctc gttggatagg agggactatt cctattttac aacagcgttg
    11101 gaataaaaat gcaacggtgt taggcattca acgccaaagt aaagtaattc gtgagcgttt
    11161 acgcaccact gcttttaaaa tgggggatat tttattactc acattaccaa aagaggatat
    11221 ggagacgtta cgccaagata aagactttat tgtgttatct tctgatttag tcaaaacgga
    11281 ggaatcgtgg aaaagtaaat ttgctttagg ggtaatggtt ttggtggtgg caacagcagc
    11341 cttaggctgg gttcctattt cagtgagtgc cttaattggt gcagttgcga tgtgtgttgc
    11401 tggttgttta acggctgaag aagcctatca atctattgac tggaaaatca ttttagtctt
    11461 agctggatta ctgccattag gtgaagcgat ggcaaatagt ggggcggcgc aatttattgt
    11521 tgataacacg cttggtaaag taggggagtt cgggccttta gtggtgttag ctgtattata
    11581 tttactgaca atggtgttaa ccgaatttat gagtaatgca gggactgccg tgttgcttac
    11641 gcctattgcg gtttctaccg ctaaaatgtt aggggtagat gcttccccat tcattattgc
    11701 cgtaatgttt gcggctgcga ccagctttat gacccctgtt ggctatcaaa ccaacacgat
    11761 ggtatacggt gcaggtggct ataaattcac agattttatt aaaattggtt taccgctaaa
    11821 tgtaatctat tggattttag ggatagtatt aattccgatt ttcttccctt ttaatccata
    11881 attgatagat aattatagaa aaaaggttta cagatcagaa actctgtaaa ccttttttat
    11941 tcagcaataa atcaattttc tattggaaaa ttaccattga taacccatgc caatactacc
    12001 accaaagtcg cctctggtat tgctgttacc agttaattta tagataacct tcccgttatc
    12061 tgaaatccga gaataaccta ctgcgattgc agcttcatta cggtatgtat ctccagccgt
    12121 tgctaacata cttttacctg gtagatatgc ttgcggtaaa cctgcggttg cagttgcacc
    12181 agcaatacca gcgcgtaaac gtttatcaac tttgtttact tttgaatcaa tattattgat
    12241 cttattattg atattttttt ctgttgcttt taattggcta aagttaactg catcagtatc
    12301 ttcagttcct gcttttacgt tagtcacttt tgttcctgct gcattaatac ctgttttagt
    12361 tatactcggt ccccctacaa tagttaatcc attagtatca atggttgtat caccagtctt
    12421 aacagtatcg gctacagcaa tgttagctgt tactgtttga gctgtgacag aattaacttt
    12481 aatatcttta gctaatttaa ccgttaatga accattacca tttgaaataa ccccgatatt
    12541 attatcagtt agttgtgatt cgttagatac cccacctttt actgtaacag tagaacctaa
    12601 tttacgttga gatggcgtgc cggtatcacc tgcaaatgtt agtgggctgg ttactgcatc
    12661 atttaacgca gtaattgcag agcctacatt attgaccgtt ttactaactt catttgtagg
    12721 agcgccatca accacagtat agcttggggc tgaaacagca ccatttgcat ttacacttga
    12781 attaccacct aaagcggtag caatagtatt tgccgtatcg taaagttggc taccattaac
    12841 tgcatctgct gagataggtg aaatatcacc atcagctaca ttagttattt ttaatttgcc
    12901 agcatcgaca cctgtcattg tgacacttgg gccattatta atggttaagc cgttgttatt
    12961 tagttttgaa ttaccaacag ctacggagcc ggcaggagtt aaatcaatgt ctttcgctaa
    13021 tttaactgtt aatgtgttag catctgttgc cactacaccg atattattat cagtcaatat
    13081 ggttgcatcg gccccacctt taacattcag agaagtacct aatttacgaa caatttcagt
    13141 accagcatca tctacaaaag taagtgctcc attacttaac tcattcactt tcgtgtttaa
    13201 accatcaatt tcggtataag cagcataaag ttgtgaaccg ttgatagcat ccgttgatga
    13261 gtccaaaata cgacctgctg caacattcgt taaagtacgt tcattgccta cagaaccaat
    13321 acttacagtt gagcttggcg tagtacctgc aaatgtgtat gtattgccat ttagcgttgc
    13381 actttttgtt gcaactgtgg ctactgtttc agagttagta cctaatgcaa cagaaccttg
    13441 gtgtgttgct tttgcatttt ggccaagagc cactgcagca gttgttgttg cttgtgatga
    13501 aacacctaat gcaatagaag ctacaccggc tgcatttgca ctattaccta aagcaatcgc
    13561 agagctacct gcagcattgg catttctacc cacagaagtt gaccatattc cacctgcatt
    13621 agcagagtta cctaaagcgg ttgactgtgt acccgaagca tttgcgttat agcctgcagc
    13681 aagagaatct gcaccgattg aacttgcttc ataacctaca gcggttgaat tttcaccggt
    13741 agcttcagat ttagagccta atgcagttgc acgggtagct gtcgctgttg aagctgtacc
    13801 aatagctgtt gaggtatcag catttgcatt ggctgcagaa ccaaccgcga gggcatttgt
    13861 tgcatttgca ttcgcattgt agcctataga agtggcattc ataccatcag ctgttgcgcg
    13921 aggaccaact gcagttgtac gttcaccgtt tgcttctgct tcagagccta atgcggttgc
    13981 cagctcacca ttagcacttg ttgcaacgcc gatagccatt ggattaacac cgctagagcc
    14041 tgaattatca tagttagcac gttgaatgcc atcatctgaa atactaacat aatgagttgc
    14101 aaatttgctg atagcttgtt tgagttgact gacattgacc gcatcagtat ctacatcgcc
    14161 tgcggcaaca ttggcgattt tattaccgcc attatctaag ccagatttag taagacttac
    14221 cggtttgtct gcaacgccgt tagcgatggt gatacctgta ttgttaacaa cggtatcacc
    14281 tgttgttaat gaaccattag cgcctaagtt aactttttct gctaatttta tggttaaagt
    14341 actattgcca tcagctacaa caccaatatt attctcggtt aatatgcctg tagatccgcc
    14401 tttgatcttg actgttgaac ctagatggcg ctcaaaatta gttcctgtat caccggcaaa
    14461 ggttaacgga ctgatcaccg ctgtgtttaa tgcgcttagt gctgcagaaa cagtagtgta
    14521 tctcccttgt ttgccttctt tatctgcatc tggtgtgcca ttcactaaag cgtaggttgg
    14581 gaaagtgata tttccatttt cagtaacagc tgccccacca cctaagatat ttgcggttgt
    14641 tgcagcaaca ttacctatag cttgttgtgt taaatataat tgtgaaccgt ttatggtatc
    14701 tgtagagctt aaagatatac gtcctgcagc aacattggtg atagttctct ctttgccttc
    14761 cgccccaata cttactgtag caattggatt tgttccagca aagtcactat atgtaatacc
    14821 atttacagtt gcatttgtag ttggtatggc tatagctgta actgagttgc tacctagcgc
    14881 tatcgaatcg gtatgttcag cagtggcatt tcgacctata gcggttgcat taaaggcgga
    14941 agcatttgat gattctccga ttgcaattgt gcgttgattt gttgctttag cgcttacccc
    15001 tagtgcaaca gaagccgcgc ctgatgcagt agcacgattg cctaaagcgg ttgcagaacc
    15061 tccacttgca ttggcttcac gaccaaatgc agaagcataa tcgctggttg cacccgcatt
    15121 agtaccaaca gcagtagtta aatttgctgt tgcatttgca taataaccta atgaggttgc
    15181 accgtggcct gaagtcttcg cttcataacc aattgctgtt gagttatcgc catttgcttg
    15241 agattttgca ccaattgctg tggagtgaat agctgttgcg ttagcttcag caccataggc
    15301 ggagctaaca ataccagttg cattggcatg actacctaca gcagttgctt ttcctattac
    15361 cgtttctcct gttgctgctg tagttttgta attattaaca ccatttgcaa gagcggaatt
    15421 accgatggcg atattatcat cactggttac atttgtagta ggtcctgcta gttttgcatt
    15481 agcataagta ccaattgcaa tattgtggct accactagta ccgtctccag cagtattacc
    15541 aatagaaatc gtattgtttc ctgttacatt agagctagcc gaataaccaa taccaatatt
    15601 gtattctgtg ctgttagagt gatttaatcc ggcatgatcg ccaataaaaa cttcacgtaa
    15661 gcccattgcg gttgcattgt accctactgc tacggaacgt ttatcggcag tggcttgccc
    15721 accaacagct gttgaagcaa aactagcgtt agcaaagcct cctaatgcag ttgaaaaatc
    15781 ggctgtcgcg gttgtgttat accctaatgc tgtagaaact ttaccgctat ttccttctaa
    15841 gcctgttatt gtgcttacta gtgttgagtt aactttagat ccatcaccaa ttgcgataga
    15901 tgtttgtggg ttattatctg gtatggtccc ataggttggt gaataggttg cagcacttgc
    15961 aaaacctgca gaaagcgcaa gacttagtgt gctgagttta ataatattag tggttagtga
    16021 tgtatttgtt gcattagatt tattagcact tcttgataat tcagaagcaa caatccaagt
    16081 tcgttttgca tggttccaaa caatgcgata aattttattc atagaactac tcctgttctt
    16141 attttttaat aattttaatg atttgagtat tgcctagcca aatatataca ataggctgaa
    16201 aaa
//
LOCUS       DANLTI010000054        15966 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.054, whole genome shotgun sequence.
ACCESSION   DANLTI010000054 DANLTI010000000
VERSION     DANLTI010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15966
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.054"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(91..1131)
                     /locus_tag="PXB09_001332"
     CDS             complement(91..1131)
                     /locus_tag="PXB09_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL5233456.1"
                     /translation="MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLEC
                     SAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFV
                     KDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
                     SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQ
                     KQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSR
                     DDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVI
                     KFKPSKLLQRTQ"
     gene            complement(1140..2942)
                     /locus_tag="PXB09_001333"
     CDS             complement(1140..2942)
                     /locus_tag="PXB09_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDL5233457.1"
                     /translation="MENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIP
                     VSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTA
                     RIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKW
                     HEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVA
                     YAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVA
                     AGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKC
                     GDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQ
                     RCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRL
                     LEYRTFKGADFAEQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYN
                     VELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEA
                     SHADLAWACLQVFINEPFDGKLEETTGTVDFLDD"
     gene            3092..3919
                     /locus_tag="PXB09_001334"
     CDS             3092..3919
                     /locus_tag="PXB09_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDL5233458.1"
                     /translation="MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARI
                     NLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKV
                     YTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
                     EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTEN
                     DRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF"
     gene            3933..4961
                     /locus_tag="PXB09_001335"
     CDS             3933..4961
                     /locus_tag="PXB09_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDL5233459.1"
                     /translation="MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLY
                     EKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQT
                     YHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
                     NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELI
                     DEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPF
                     FPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIE
                     NITLKDKE"
     gene            4971..5660
                     /locus_tag="PXB09_001336"
     CDS             4971..5660
                     /locus_tag="PXB09_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDL5233460.1"
                     /translation="MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQ
                     RQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTA
                     LAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAE
                     FDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQA
                     EEPKPAEEQNE"
     gene            5772..6287
                     /locus_tag="PXB09_001337"
     CDS             5772..6287
                     /locus_tag="PXB09_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDL5233461.1"
                     /translation="MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIEL
                     LEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQING
                     ESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDI
                     LGENRMISELI"
     gene            6284..6496
                     /locus_tag="PXB09_001338"
     CDS             6284..6496
                     /locus_tag="PXB09_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5233462.1"
                     /translation="MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLP
                     IGTVVTMPDIESRFATVAKSSVQLWD"
     gene            6502..6708
                     /locus_tag="PXB09_001339"
     CDS             6502..6708
                     /locus_tag="PXB09_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDL5233463.1"
                     /translation="MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAY
                     RAKEYKLKEREFELKLQNQGKKNE"
     gene            6701..7267
                     /locus_tag="PXB09_001340"
     CDS             6701..7267
                     /locus_tag="PXB09_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5233464.1"
                     /translation="MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEG
                     CRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFN
                     GDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDF
                     NRSGGKVLRGLKIRREKEKALCLGQEVK"
     gene            7264..7719
                     /locus_tag="PXB09_001341"
     CDS             7264..7719
                     /locus_tag="PXB09_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233465.1"
                     /translation="MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQA
                     RTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNEL
                     EKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD"
     gene            7868..8089
                     /locus_tag="PXB09_001342"
     CDS             7868..8089
                     /locus_tag="PXB09_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDL5233466.1"
                     /translation="MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIP
                     EKRREMVIGCTRCIECQTIYEHKQKGYRR"
     gene            8086..8571
                     /locus_tag="PXB09_001343"
     CDS             8086..8571
                     /locus_tag="PXB09_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5233467.1"
                     /translation="MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSF
                     EYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYD
                     IYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPN
                     E"
     gene            8564..9022
                     /locus_tag="PXB09_001344"
     CDS             8564..9022
                     /locus_tag="PXB09_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5233468.1"
                     /translation="MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIK
                     AQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAV
                     IARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS"
     gene            complement(9073..9351)
                     /locus_tag="PXB09_001345"
     CDS             complement(9073..9351)
                     /locus_tag="PXB09_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233469.1"
                     /translation="MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLAN
                     MVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ"
     gene            9390..12302
                     /locus_tag="PXB09_001346"
     CDS             9390..12302
                     /locus_tag="PXB09_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5233470.1"
                     /translation="MSNNLKIQVVLSALDKLTAPFKSVVKQTEKLSQSLKVQRDELKA
                     LEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKR
                     EFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQ
                     AKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKAR
                     NEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNA
                     ILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDT
                     GAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKV
                     NKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWI
                     KNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARE
                     NKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALF
                     DSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTK
                     VFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRA
                     FFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKA
                     SSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEH
                     AKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGI
                     VHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTA
                     SQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG"
     gene            12364..12543
                     /locus_tag="PXB09_001347"
     CDS             12364..12543
                     /locus_tag="PXB09_001347"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233471.1"
                     /translation="MMFKEKGYDEFVNECVRKGREEHKAGLGFTLEQSRLHIKKTIEQ
                     KSQELNEFQREVVYG"
     gene            12536..12823
                     /locus_tag="PXB09_001348"
     CDS             12536..12823
                     /locus_tag="PXB09_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5233472.1"
                     /translation="MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQ
                     IAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVIILAIIHSSRLYPRP"
     gene            12952..13557
                     /locus_tag="PXB09_001349"
     CDS             12952..13557
                     /locus_tag="PXB09_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5233473.1"
                     /translation="MSEPNHAEQIRRLDNIIRLGTIAEVDLTTATARVNSGGITTDFL
                     PWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIYTQNAPSQSADEHLFRFS
                     DGAEISYNTASGQLTVKNCKVVIVQATESITLDTPTVKATKNVVIGGNLSVKGTTSSQ
                     GAISTQGAVTAKGDVSGAGISLGSHHHIEQGDGRPTSGAKP"
     gene            13557..13892
                     /locus_tag="PXB09_001350"
     CDS             13557..13892
                     /locus_tag="PXB09_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5233474.1"
                     /translation="MNRETGEQLEDEVEHIKQSIKDILLTAKGSRVMRRTYGSNLYKL
                     TDKPIAASLIMQLSAACVMALQQWEPRIAITRFKVEFAEDNYNKLICTLDFTLKHRKI
                     SIKGMRFTL"
     gene            13889..14806
                     /locus_tag="PXB09_001351"
     CDS             13889..14806
                     /locus_tag="PXB09_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDL5233475.1"
                     /translation="MSEIVDLSKLPAPKVLEELDYETLLAERKAKFLSLYPESERAVM
                     AARLALESEPITKLLQENCYLQLLERQRINSAAQATMLAYATGTDLDVIAANFNVERL
                     VVQAEDLTASPPIVEELEPDDDFRQRVQLKIESVSVAGPRKAYTFHALSANGKIADVS
                     VISPQPAYVTVTLLSRDGNGAVASEIINAAKIALNDEEVRPIADRVTVQGASIVEYEI
                     NAVLHLYRGPEKEPILKAAKANLEAYINQTKRIGRDVTHSGIHAALHVAGVQNVEILQ
                     PRTDLVLTPYQAGYCVNYTLNVEVSDEYS"
     gene            14793..15425
                     /locus_tag="PXB09_001352"
     CDS             14793..15425
                     /locus_tag="PXB09_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDL5233476.1"
                     /translation="MNTVKALLPPGSSLLEKRAAECLQQAVQNPIKFANLINPHKCPV
                     KFLPYLAWALSVDYWEEHWSEELKRETIIRSFEEHRKKGTASAVRRIVESLGYAFEIR
                     EWFAEKRQRQPGTFRVFVELKDKGISEKIYQELERLIEDAKPVSRHITELAVSATSKG
                     KANIFSGAHSGEIITIYPPKKLPVIVIKSKMDLFSATNSGEIITIYPNKR"
     gene            15428..>15966
                     /locus_tag="PXB09_001353"
     CDS             15428..>15966
                     /locus_tag="PXB09_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015981653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5233477.1"
                     /translation="MEQKYKTILTHHGERVIVEALANKIPVPLKEMAIGDGNGSSITP
                     SASQTTLVREVYRAEITDLLEDPQNRHQMIAELLIPENVGGFIVREIGLFDEQGGLVA
                     VANCPENYKPVLEQGSGKVQYYRMILQVSSSDAVTLSINNNIVYATRTEFNEFVNNLS
                     SPDGYKHIGRCKSVAELRT"
BASE COUNT         5085 a         3343 c         3551 g         3987 t
ORIGIN      
        1 aatatataat ctaatcaggc aaaacttttg ctttatatat taaaaaagcc ccaatctagg
       61 agctgtattg tcagtttgta aagatctgtt ttattgtgtc cgctgtaaca atttagacgg
      121 tttaaatttg ataacctctt gacctaacca ctgattaaac tctttcaatc gctcttgcaa
      181 tggctcaatc tcggtgataa aaaacacctc ggcagcatca gccacgttgc caaaaccgcc
      241 ggtgttattt gggataatcc ccatcagttg tggtggcaca cggtgagcag ctaacacatc
      301 atcacggctc acgttcttga tattaaaaaa ctcatctttt gccgacacat cagcaatcgg
      361 aataatctgt attccatctt tcttgccgtt tggtgcgtgg acgaacaagt ttttaaaatt
      421 ccccacccct tttgactgct tgagctgctg gcgaatattt tcaacatctt cttgtttttg
      481 tgacgcatcg ctcatataaa acacaaagcc ggcgtgagct ccatttaaaa aatacttacg
      541 gcgaaacaga gtagcactct catttaacca cgcagattgc agggccgaaa gatattgtgg
      601 caagccgtaa atatcttgat taatatcagg ctcaagcaag tgatagattg agcctttggc
      661 aaattcgtgt tcttggtgat cgaatcgttg tggcacatag taaaattgac cagcctctaa
      721 accctttcgc acatattttg ccaaaggtga ttcgattcgc tgtacctgcc caaggcgatt
      781 tcgcaccacc tcaaaatagg cgttgccaaa tactaaataa tctttaacaa acgatgacaa
      841 atcacggcgt gataaataac ggctatcaac ctcgcaagtg gaaagcaaaa tatttgcttt
      901 ggtgatgatc gcactttcgt ggtgtgttga tgaccttaac gatttcgcca agccatcaaa
      961 gctcatcggt gggttatacc atttctcata catcgccgaa cactccaaat aattgagaat
     1021 atcggcacgg tctaacaccg gaatcgggtc accaaaactg aaaatttcgg tttgtgcttg
     1081 cggttgtaag cggtcatttt gggttaaatt tttgcgcaat tgttttttca ttttttgtcc
     1141 taatcatcta aaaaatctac tgtgccggtc gtttcttcca gtttcccatc aaacggctca
     1201 ttaataaata cctgcaagca agcccacgca aggtcggcgt ggcttgcctc ttccgaacgg
     1261 tctgccacat aagtcacttg ccgtccgctg ttggtgatct gttttttaat tgccataaaa
     1321 ctcgcaccaa cctcaacagc gtgcattgag tcaaattcaa atcgtccttt gctgataata
     1381 tccaagcctt ttagtaccat cttggatttc agctctacgt tgtaagtaag agccaccgca
     1441 tctggtcgtt cttttttgac gatttcataa acaccgacac caagccctgt ggtatcaatc
     1501 gccagtctgg tcacgttata ttttgcacaa atagcgacaa tttctgccgc ttgttcggca
     1561 aaatcagccc ctttaaaagt gcgatactct aatagtcgga atttcccgcc gtccactttc
     1621 ggcggagcga ttaccaccaa cgccgagcgg tcgccggtgt aagacgggtc atacccaacc
     1681 catacctctt tattgccgaa tgggcgttgg tagccgtccg tgaatacata atctcgccac
     1741 acctccatcg agtccacaag gcaacgttgc atcatcgtga acttgaacac agactggtta
     1801 tcatcaataa actcacacat aaagagctgc tcgaactcat cgggcgagtt ttccagtttg
     1861 agttgctcaa tatcaaacag gttacagcca cctgcctcgg catcgtagat attcacgatt
     1921 tgtcgccatt ggccgtctcc gcattttttg ccgtttttca agttggcgtg agaaatatca
     1981 atttccacct gttccgcttt cggacgtttg cggttaaaca gcttgcccga ccaaagcaga
     2041 taggcggaat gggtaatgct cgaaggggta gaaaaataag taatccgata ttgtttttgg
     2101 ctcgccatac ccgctgccac tttgcggatt tcctcaaagc ggtttaccca aaagatttca
     2161 tcaaaataga gattgccgtg gtaagactgt gccgttttcg agtttgtacc caagaaaatt
     2221 agttgagact cgttcggcaa ggtaatggtt tcgcctttta gctccacatc ggcaacccgt
     2281 ttggcgtatg ccacaatata ggctctaaat tgcaatgcct gttttttcga ggcggaaata
     2341 aaaatctgat ttctaccggt tactaacgca tcaactaacg cctcgtgagc aaaataataa
     2401 gtcgctccaa tttgacgact tttaagaata ttgcggattc gatgagtcag cccagcttcg
     2461 tgccattttt tctgataatg gaacattccg tctaaaaagc cgtttatcaa cagttcggct
     2521 tgctcttcgg aaatggcatt ttgctcgggc tttttgcggt cgcctttatt acggttttta
     2581 atatttgggt tgaggtcggc ttcattacct ccgccgttag aatatttttt gattcgtgct
     2641 gtactttcca acaaccgacg taaagcatcc atttctttgt agtcgttatt gtttttgctc
     2701 tctttcataa tcagcaaatt cagccgtgat tccagtgtgg cttccacacg tccaacgggg
     2761 ctgatttcgt cccatttctc tcgctttttc caacttgcaa tggtagagac gggaatattt
     2821 agctgacgag aaatttcggt cacggtgtaa cctgcccaat actttgattg agcctctcgt
     2881 ttatcgtgta gagggttggc agccaacacc tcgtattcag tgattgtatt ttcattttcc
     2941 ataggtgcga ttatcaaaaa tccaccttgt ttaagcattt gcttgaggct gtgaaacccg
     3001 atttaacacg taccacacat tgaaaccgcc ggcacaaaac aagatcataa atccgatttt
     3061 tacccctccc ctttagagca aggaaaaaca gatgacaaca aaatccaaat ggtttgtggt
     3121 agcaacggaa ggagcaacta cagatggacg cgaaattagt cgtgaatggc tcacgcagat
     3181 tgaagaaaat tacgacccga aaaataacta tggtgctcgt attaaccttg agcatttccg
     3241 ctggcgttgg tttgagaaag atgacccgca ttcttacagc tatggcgatg tgttagcggt
     3301 taaaacagaa gaacgtgaag acggcaaatt acagttactg gcagaaatcg ccccaaccga
     3361 agccttagtg aagttagtca aagacaagca gaaagtttat acctctgtgg aaattgacct
     3421 taattttgcg gacacaggcg aggcgtattt agttggtttg gcggtgactg atacaccggc
     3481 aagcctcggc acggaatacc tcacattttg tgccggtgca acccataacc cactagcaga
     3541 ccgcaagcaa aagccggaaa accttgtgag tgaggcagta gaggcgaatt tagaatttac
     3601 tgctgaacct gaaaaaggtg cgtggctgga gaaatttaag gcgatgttta ccaaagccaa
     3661 aaccgacaat gacggcaaat ttgccgaaca cgaaaaggca atggaactgt tagctgagca
     3721 atttagcaaa gtttcgacag aaaacgaccg cttgcaaact gaactaagca cattgcaaat
     3781 cgaatttacc gaattgcaaa aacaagcggg cgaatttgcc gaaaaatttg caaaactgga
     3841 acaagaaccg tctgccaatt acaccccacg cccaaaagcc actggtgcga aagcaggtga
     3901 tgtacaaacc gatttttaat tgaggatcac gaatgaaaga tttaaccctt gaaaaatata
     3961 acgcctacct tgcacgccaa gctgaattaa acaacttgcc gtttaatgca ttggcaaccg
     4021 gcattaaatt cacagtgcaa ccatcggtac agcaaaagct gtatgaaaag gtgcgtgaaa
     4081 gctctgattt cttaaaatct atcagctttg tgtttgttga tgagcaaacc ggtgaaacct
     4141 taggtttaga ttcagctcac accgtggcca gcaccaccga taccagcggt gacggtgaac
     4201 gcaaaaccac ctctattgcg aagttggtaa aacaaaccta ccactgccaa caaatcaatt
     4261 ttgacaccca tatcaattat aaacagttgg atatgtgggc gaaattccct gattttcagc
     4321 aaaaagtggc gaatgttgcg gcaaaacaac gcaaacgtga cttaattatg atcggcttta
     4381 acggcacaag tcgtgcggca accagtgatc gcaacagcaa cccgttattg caagatgtgg
     4441 caaaaggctg gttgcagaaa atgcgtgaag atgccaaaga gcgtgtaatg aatggcgaaa
     4501 gcacagacaa ccaagtttta gtcggcaaag gtcaagagta tgccaatctt gacgcactcg
     4561 taatggacgc caccgaagaa cttattgatg aatggcatcg tgatgacacc gatttagtgg
     4621 tgattaccgg tcgcaagttg cttgcggata aatatttccc gattgtgaat cagcaaaacg
     4681 caccaaccga agaacttgcc gctgatattg tgatctcaca aaaacgcatt gggggcttaa
     4741 aagcggtgcg tgtgccgttc ttcccggcga atgcgatttt aatcactaag ctggaaaatt
     4801 tagccatcta tgtgcaagag gggacaaccc gcaagcatat tgagaacgtg ccgaaaaaag
     4861 accgtattga aacctacgaa tcagaaaata tcgactacgt tgtcgaagat tatggctgtg
     4921 cggcattaat cgaaaacatt acactcaaag ataaagagta aggtggaact atgcgaatga
     4981 gtccggctcg ggctcatttt ttgcggaaaa ccgcagaaag tgagtctgca accccaaacc
     5041 gagaaaacct tgaaggctta caaggctatg acttagtttt agcccaactt aaagcccatc
     5101 aacgccaatt aaagaaaatc cagtcgattg agcgaaagat tgagtttaaa cgcaacaatt
     5161 ttgagcaata ccgaccttgg gtggaaggct cccttgccaa aggctccggt gtgcaagaca
     5221 cggttatcac cacaatgctg atttggtcga ttgatattgg cgattaccca accgcccttg
     5281 cgattgctca atacgtttta atgcacgatt tggcaatgcc ggagcagttt gaacgcacac
     5341 cggcaaccgc cttggttgaa gagcttgcag aggcggcaaa gaaagcccga gaccaaaaac
     5401 agccgtttga ggcagccgtg ctgaaacagg caaacgacct caccgctgaa tttgatatgc
     5461 ccgacccagt gcgagccaaa ttactgcgtg agctaggcga gctaatccaa gaggcagagc
     5521 cacaaaccgc ccttgaacac tatcaaagag cgatagccct cgaccctcaa tgcggtgcaa
     5581 aaggcttgcg agacaagtta gaaaagcaac ttgccaaaca agccgaagag ccgaaaccag
     5641 cagaagaaca gaatgagtag gcgaaagccg aaatagagcg tatccacgcc agccaagggg
     5701 cggattttaa agggtgattt attcattttg caccctttta aaatccccac cccttacctt
     5761 acggaaacct tatggaacaa cgcaatcacg ttattagtat cccgaaagtg aatggctatg
     5821 aatccagcaa aaatgcgatc aagcccaccg cagaatctga tgaaactatc accaataatg
     5881 gcttttttcc gaacattgag ctactggagg tgcgaaatgc aatgcggatt gatggcacgg
     5941 tcattaatga gcggctaaaa caagcggtga ttgaggcaat ggcaacagtc aatgccgact
     6001 taaaagccta tcgcctcaat gcagagcaag cacaaaaagc gaacttgcaa gcctgtgatg
     6061 atgagcaaat caacggcgaa agcgtgctgg tttacaaata taaacgagcg gtctattgcc
     6121 ttgcagtagc gaacctttac gaacgctacc gcagttatga cagcaccaaa gacggccacg
     6181 acaaagccga agagctagaa agtaccgccg gtgatttgaa acgagattac cactttgccg
     6241 tgcgtgatat tttgggcgaa aaccgaatga ttagtgaatt gatatgaaca ccttgattgc
     6301 acgccaagac gacaccttag acgagctgat ctttcggcac tacgggcaaa cggcaggctt
     6361 agtcgagcaa gccttagaat ataaccccga actggctcat ttgccacgtt tgccgatcgg
     6421 cactgtagtt acaatgccgg atattgagag ccgttttgca acggtggcga aatccagcgt
     6481 gcaactttgg gattaaaaaa tatgcacaaa actgaacaag cctcctattt tggggcaatt
     6541 tttggctttt ttggtagcct caccctatct gattgggggg tggtagtgag tattctggta
     6601 gctattttaa ccttattact taattgggca taccgagcca aagaatacaa actgaaagag
     6661 cgagaatttg agctaaagct acaaaaccaa gggaaaaaga atgagtaaaa gtgtaaaagt
     6721 tggcgtattt gtctgctccg ttgcagctat tatcgggacg gtaaagcaat attacagctc
     6781 cgaaatccgc accagcgaaa caggcttagc cattatcggc aatgcggagg gttgcagacg
     6841 tgatccgtat aaatgccctg ccgatgtaat cacggttggc attggctcaa ccgaggcaag
     6901 cggtgagaaa attaatgtca atcacaaata caccgataaa gagattgccg agcgttggat
     6961 aaaagatctt aaaatagctg aaaggtgtat caatcgttat tttaatggcg acaaaatgaa
     7021 cgaaaatcag ttttcggcga tggtatcagc agcatttaat atgggatgtt acaaccttag
     7081 attttatcca aatgaaaatg gtaaatacat tcagacaaca atccataaat atgctatggc
     7141 taaggatttt aaagcgatgt gtaataggat acctgatttt aaccgctcgg gaggtaaagt
     7201 gctaagaggt ttgaaaatcc gccgagaaaa agaaaaagcc ctgtgtctcg ggcaggaggt
     7261 taaatgattg tcaaactctg ccaaatgacc aataagcatt tcagcccgct aatgattgtg
     7321 ctggtgctag ttggcgtatt agccaatttc gtgcagtttc gccaaaacga aagcctgaaa
     7381 gcagacttac aggcacgcac cacgcaaaac caactgattc aagccgataa ccgcaattta
     7441 gccaatcagc ttgaaaacag ccaaatacag cttgaggcgt atcaaaaaca ggtggacgac
     7501 ctcaatcaga aagtgttagc caaaatgaaa caagcggagc aacgaagtaa tgaaatcctt
     7561 aacgaactgg aaaagcataa aaagtgggct gattctgccg tgcctcctag cgttggcaag
     7621 ctgctcaacc aacgaaagcg tgcggtatca caccctcaaa tcgaacccga taatctgtcc
     7681 gaaaaggctg gagtgccaaa caccggcaac cgagattaac accaacggtg atcttgtcaa
     7741 agcactagac aaaagactca acaccattga ggtatgccaa gtcatcatcg aatcgttcga
     7801 gcattgcatc gagcaataca acaaaatcaa ccaaggcgag tgatcgcctt ttttaataag
     7861 gacgactatg tcagaccaaa tcgaccgagc caacgaatta gccgaaaaag ccagagaggc
     7921 ggcacttgca aaaattctgc aaaatcagac cgcttgcacc agcctttttg agtgtgagga
     7981 ttgcggagag ccaatccccg aaaaacgccg agaaatggtt attggttgca cccgttgcat
     8041 tgagtgccaa accatttacg agcataagca aaaaggctac cgcagatgat taaacctgat
     8101 cgcttgcgag ccgtgctcac acaaaccatt gatatattcc aagctaaccc cgaaaagctg
     8161 attttgcaat atgacaaagg caaaattaaa agcaaaggga gccaaagcca ttcgtttgaa
     8221 taccactacg atttagagct aatcgtggtg gattttccgt atcaccccga cgtgttgttt
     8281 gtgccagtgc taaattttgt gcgaaatgaa caatgggagc tactgcaaaa cccggaacta
     8341 caagacaaaa tcgaatttga aatcgaccac aacaatcacg agagctacga tatttatatc
     8401 cgcctcccgc ttaccgagcg ggtgatcgtg aaagagcaag acggacacct aactgcaacc
     8461 cacgccgatg aaccgaacct tgccgatgtt tcgccattta cccgtttaac cgaatatgag
     8521 gtttacctca aagacgagct gatttatcag tgggcagagc caaatgagtg aaccgatcga
     8581 acaagtaaaa accgcctttg atagcttact gaataatatc agcaaacctc gcagacggtt
     8641 gatgtatcaa caaatcgggc gagagcttgc ccgaagccaa cgcagacgga ttaaagcaca
     8701 acaaaaccca gacggctcgg catacgagcc acgcaaaaag ccgaagaaag gggtaaaaag
     8761 caaaattaaa tcgggcaaga tgtttgacaa aattacccag ccacgtttta tgcggctacg
     8821 ccttgaaagc gaaggtgtca gcttaggtta tgagggtggt gatgcggtca tcgcccgaat
     8881 ccaccaacaa ggcttaatcg gacgagtgcg gaaagattgg gatttaaaag tgaaatatgc
     8941 cagccgtgag ttgctaggtt ttactgatga cgatctgcag atgattgagg attatatgat
     9001 taatattttg gctggtagct aaatgatgaa tagaaacttt tgcaaaaaag cggtcaattt
     9061 tgaccgcttg agttattgat taacgctttg tctatctgaa tgataccaac aaagaaaccc
     9121 taaaatagct gaaaaaatca atgctatcaa aataaaagta ttgagtggta acaatacata
     9181 aagtgagatc agaataacga taatagagag cccaaccata tttgccaata atgaaagcag
     9241 gcttaaaaat actgttgtaa ctacaccaaa aatggcagca aaggttgtaa aacctattgc
     9301 caataatgca ccgaaaccaa ttaacccaag taagataaat aagatttcca tagattttcc
     9361 cttagccata ctacaattaa ggttataata tgagcaataa tttaaaaatt caagtagttc
     9421 tttctgcgtt agataaatta accgcaccat ttaagagtgt ggtaaaacag acggagaaat
     9481 tatctcaatc tttaaaagta cagagagatg aattaaaagc attggaaaaa acacaaagta
     9541 aaatgcaatc atttaaaaaa atggacgata gcattaagaa atccaatgaa actatactca
     9601 aacagacaaa gcatttagat aatctcaaaa ataaaatcag ccaaatgaaa aatgaacgaa
     9661 ttgagctgaa agtgaaaatg gatgcgaaaa aaagggaatt tcaacaaatt acgaaaggtg
     9721 gttcagcttg gagtgcaaga gccgcatttt tagataaaga ttttgaaaaa atgcaaagag
     9781 aatatgaaaa actcggtgca tctatttcaa gtgtcagccg aaaaagaaca gaagaaaatc
     9841 gggcattaaa ggattctcgc catcaacaag ctaagcaact tttatatttt cgtagtttaa
     9901 gacgtgaatt gagagcaagc ggcattaata ttaaagcttt tgctcaaagc gaaaccaact
     9961 taacagacaa gattgcaaaa gcaaatcaat taatcgacca acaaaaagca aaattagaaa
    10021 aactaaatgc ggttaaagct cgaaatgaaa aatattgggc aactgtcgaa aaggtaaaaa
    10081 ataccagcga acgtttgcat aatttaggac aacgctcaat gattagtggt gcggcaattt
    10141 ctgcccctgt tgttgggcta gggaaagggg ttgtcggaat ggctcaaaca gcgggtaaat
    10201 ttgaacaatt taatgctatt ttagaggtaa ccgagggaag tgctgaaaaa gccaagcaaa
    10261 gttttgattg ggttaaacaa tttgcagtag ataccccctc aaaccttgat gaagcaatgg
    10321 aagcctttgt aaagttaaga gcatacggtc ttgatcctac caatggctta ctacaaacat
    10381 taggtgatac aggtgctgca atgggtaagc ctgtaatgca agcagttgag gcaatagcag
    10441 atgctttaac gggtgagaat gaacgcttaa aagaatttgg tattaaagga agtgtagtta
    10501 aaggtacaaa tattattgag tatgcctaca ctgataaatt aggcaaacaa caagtcgcaa
    10561 aagtaaacaa aaataaccga aaagaaattg agcaaaccct aacccgtatt tttaacgaaa
    10621 aatatgctgg agcaatggaa aaacaagcta aaacgctagt tggtatttgg gcaaaaattg
    10681 aagattattg gacaaatttc caaatgcaag tgatggaatc gggagcattt gactggatta
    10741 aaaataaatt gcaatgggtg ttagacagtt tagataaaat ggctgaaaat ggcgagttgc
    10801 aaaaatgggc tgaagatgtc ggagccgtta ttcaagaaac agtacaaggc ttatgggctt
    10861 ttggtgaaaa aattattgaa gtggttaaat ggttagcgag cttggcacgg gagaataaag
    10921 ggctaattgc aacattcgtt aaatggtctg ctattcttgg ctctagttta acggtgctag
    10981 gagcttttgc agtggtggca agttttgcat tatatcctgt agcaagattg gctcttggta
    11041 tcggcaaatt tacaggtgca agcaccttat taaataaggc attatttgat agtaatgata
    11101 aattccgatt attcaataaa tcactttatt catcaggcac tacggctgct tttgttaaat
    11161 caaaatttaa tcagttagca actttaccaa atgtgctggg aagtagtttt aataaattag
    11221 gcggtggcat caaaatgcta attccacagc ttaaaacaaa agtattttgg ctcaatatgc
    11281 taaaaggtat tttaggcaag ttgtggagtg caatccgttt tattttctca ccgttgaaat
    11341 tattacttgg tattttctcg ccgattggct tagcgattac agctatttcg gtagcagggg
    11401 tagcgttata tagaaattgg gagaaggtca gagccttttt tggaggcttt ttgcaaggat
    11461 tatctaaagg tcttgcacca gtattagaga gatttaaacc tttaggaaaa ctatttgaaa
    11521 ctatatcaaa ctgggttaaa tctacgttta agtggttatc cgatttatta accccagcgg
    11581 ataaaacatc ggaaagttta gataaagcga gttctgcagg agaaaaattc gggcttgcat
    11641 tggctggtgc aatagacttg gtaacatcac ctgttcagtg gctagtcgat cagtttaagt
    11701 ggatttctga aaatatgccg agttgggaca ctattggtga gggtgtaaaa aaggcagcta
    11761 ctgcaattgt tcccaccgag cacgccaagc agattactaa aacggcagaa atgtcaaaca
    11821 atatgtatga ccccaattat actccaccac aacttgagca aaaatggatt ggtggcttgg
    11881 ttggtaacgg taaaggaaga ggttttgcca caggcggcta caccggcaat ggtggcaaat
    11941 atgagcctgc cggtattgtg cataagggcg agtatgtaat gaccaaagag gcaactgcac
    12001 gcttgggtgt ggcaaatctt aaccggttaa attatggcaa agttgctggg ctaactgcac
    12061 ttgcgtcaag tgttgcgttt gctcaaccaa tgcctgcggt caaaatcgac agcagaccac
    12121 cgctgacggc aagccaacca agcccaacag ttgcaccggt gtcgcaaaat atccatatca
    12181 ccatcaacgc caccggtggg caagacccac aagcaatcgc ccgactggtt gcaatggagt
    12241 tggaaaaaca acaacgccaa gcacaagcaa gagcaagatc gtctttgaga gacaggggct
    12301 aatttgacaa agtagaatga aaagcggaca atgctctaaa ttgtccgctt tttataggag
    12361 caaatgatgt ttaaagaaaa aggatatgat gaatttgtga atgaatgtgt gcgaaaaggt
    12421 agagaagaac acaaagctgg tttaggattt acgctagagc aatctcgctt acatatcaaa
    12481 aaaaccattg agcaaaaatc acaagagcta aacgaatttc agcgtgaagt ggtttatggc
    12541 taaaattacc attaaaccac aagcattgag tcaatttgac gagattgtaa aaagtgttat
    12601 cgaatttacc ggttttgaaa cgagtggtat tcgattacaa agtgatattt ttgacaaaat
    12661 agagcaaatt gcatttatgc cactctctgg aagagcaaga gaagatggga caagagaaac
    12721 tttcgtcaga cgttatcgta ttgtgtacga ttacgatagg caggcagatg aagtaattat
    12781 cttagctatc attcacagta gccgacttta cccacgccca taatcagtaa gcgacctaat
    12841 cggtcgcttt ttctttgcct gttaaaaccc atttcacacc tcgcatttat acccaaagcc
    12901 tttcgccttt tgcaaaatat cctcattttt taaccgcttg taattgtaaa aatgagtgag
    12961 ccaaaccacg ccgaacaaat ccgccgttta gacaatatta tccgacttgg cactattgcc
    13021 gaggtggatt taaccacagc gactgcacgg gtcaattcgg gcggtattac gaccgatttc
    13081 ttaccgtggc tgacttttcg tgccggtaca tcgcaaacgt ggtcagctcc aacagttggc
    13141 gagcaatgcg tggtgttaag cgtgagtggt gaatttacca caggcgtgat cttatttggg
    13201 atttacaccc aaaacgcccc gagccaatcc gccgatgagc atctattccg cttttcggac
    13261 ggtgcagaaa tcagctacaa caccgcaagc ggtcaattaa ccgtaaaaaa ttgcaaagtg
    13321 gtgattgtgc aggcgacaga atctatcacg ctcgacacgc ccacggttaa ggccacaaaa
    13381 aatgtcgtga ttgggggcaa cctatccgtg aaaggcacaa cctcatcgca aggtgcaatc
    13441 agcacacaag gggcggtaac agcaaaaggc gatgtatcag gggcgggaat cagtttaggc
    13501 agccaccatc acattgagca aggtgacggc agaccaacta gcggagcaaa accataatga
    13561 accgagaaac aggcgaacag cttgaagacg aagtagagca tatcaagcag tctatcaaag
    13621 atattttgct gacggcaaaa ggcagtcggg taatgcggcg aacctatggc agtaatctct
    13681 acaagctaac tgataaaccg attgccgcaa gtctgattat gcaactctcc gctgcgtgcg
    13741 tgatggcgtt gcagcaatgg gagccacgta tagcgatcac ccgatttaaa gtggaatttg
    13801 ccgaagataa ctacaataag ctgatttgca ccttagattt tacccttaag caccgaaaaa
    13861 tcagcatcaa aggaatgcgt tttacactat gagcgaaatt gtcgatttat ccaaactccc
    13921 cgccccgaaa gtactggaag aattggacta tgaaacctta ctggcagagc ggaaagccaa
    13981 gtttttatcc ctctacccag aaagcgaacg agcggtaatg gctgcacggt tagcgttgga
    14041 gtctgagcct atcaccaagt tactacaaga aaattgctat ttgcagctac tcgaacgcca
    14101 acgcattaat agtgcggctc aagccacaat gcttgcttat gctaccggta cggatttaga
    14161 tgtcatcgca gccaacttta atgttgagcg gcttgtagtg caagctgaag acttaactgc
    14221 aagcccgcct atcgtcgaag agttagagcc tgatgatgat ttccgtcagc gtgtgcagtt
    14281 aaaaattgaa agtgtttcgg ttgccggtcc acggaaggct tacacctttc acgccctgtc
    14341 tgctaacgga aaaattgccg atgtgtccgt catatcacca cagccagctt atgtaacggt
    14401 aacgctgctt tctcgtgatg gcaacggagc cgtagcctca gaaatcatca atgcggccaa
    14461 aattgctctc aatgatgaag aggttagacc gattgccgat agagtaaccg tgcaaggggc
    14521 aagcattgtg gaatatgaaa ttaatgcggt gttgcatctc taccgtggac ctgagaaaga
    14581 gcctatttta aaagcggcaa aagctaactt agaggcttac atcaaccaaa caaaacgcat
    14641 tggacgagat gtgactcact caggtatcca cgccgccttg cacgttgccg gtgtgcaaaa
    14701 tgtggaaatt ttgcagccga gaactgattt ggtgctgaca ccttaccaag ccggttattg
    14761 tgtcaattac acgctaaatg ttgaggtgag cgatgaatac agttaaagca ttattgccac
    14821 ccggttcatc acttttggaa aaacgagctg ccgaatgttt gcaacaagcg gtacaaaatc
    14881 cgattaaatt tgcaaatttg attaatccac acaaatgccc cgtgaaattt ttgccctatc
    14941 ttgcgtgggc cttatcggtg gattattggg aagagcattg gagtgaagaa ttaaaaagag
    15001 aaaccattat tcgatctttt gaagaacacc gaaagaaagg cacagcaagt gcagtgcgaa
    15061 gaattgtgga atctctcggc tatgcttttg aaatccgtga gtggtttgcg gaaaaacggc
    15121 aacggcagcc cgggacgttt agggtttttg ttgagttaaa agataaaggg attagcgaaa
    15181 aaatctacca agaattagaa aggttgattg aagatgcaaa accggtatca aggcacatca
    15241 cagaattagc agtatcagcc acctcaaaag gcaaagcaaa tatttttagt ggagcacaca
    15301 gtggcgaaat tattacgatt tatccaccta aaaagctccc tgttattgtc attaaaagca
    15361 aaatggattt atttagtgca acaaacagtg gcgaaattat tacgatttat cctaataaga
    15421 ggtaaaaatg gaacaaaaat ataaaacaat attaacccat cacggtgagc gagtgatcgt
    15481 tgaggctctt gcaaataaga taccagtgcc acttaaggaa atggctatag gagatggtaa
    15541 cgggtcatca ataactccaa gtgcatctca aaccacactt gtaagagaag tttatcgtgc
    15601 ggaaattaca gatttgctag aagacccgca aaatcgccat cagatgattg ctgaattact
    15661 aatcccagaa aatgtaggtg gatttattgt ccgagaaata gggttatttg atgaacaagg
    15721 tggtttggtt gctgtagcaa attgccctga aaattataag cctgtattag aacaaggcag
    15781 tggtaaagtc caatattacc gaatgatttt acaagttagt agtagtgatg cggtcacctt
    15841 atcgattaac aataatattg tttacgccac aagaactgag tttaacgaat ttgtaaataa
    15901 cttgagtagt cctgatggct ataaacacat cggacgctgc aaatctgtag cagaactccg
    15961 cactat
//
LOCUS       DANLTI010000055        15880 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.055, whole genome shotgun sequence.
ACCESSION   DANLTI010000055 DANLTI010000000
VERSION     DANLTI010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15880
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.055"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1245)
                     /locus_tag="PXB09_001354"
     CDS             complement(<1..1245)
                     /locus_tag="PXB09_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5233478.1"
                     /translation="MQEAYDIQHLCTRKEDKSFDRKSARKEPKEILRHLIGFANADGG
                     LLVIGIEDNGEITGFNYQKAHQPEEFIHALHNLQKMPIPVTYQQIEVVNSRGLADFVL
                     LFEVTASSGRVITSHDDRVFLRSKDQTLELNFEQRLQLEYEKGQRAFEEQPIARADFT
                     DLDMDLLEQYRQKLHTDRSIEEILKARDLINKEGQITNACILLFGNNPTRYFPNARLR
                     FLRYEGKAPLTGRTFNVVKEFMLEEPIPKLLESAKAVLKSQLREFQRLDENGQFTKID
                     EYPEFAWLEGIVNAIAHRSYSNQGDCIRISMFDDRLEIFSPGGLPRPVTLENMYYTRF
                     SRNPKIARVLYEFGWVKELNEGVNRMAEEMNAYQLNTPSYFEPNENAVRLILENNIEH
                     RTLRALERIEEIFTQDIMATLNK"
     gene            complement(1345..1749)
                     /locus_tag="PXB09_001355"
     CDS             complement(1345..1749)
                     /locus_tag="PXB09_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HDL5233479.1"
                     /translation="MHKFTFPIEQIAPLVPHSGNMILLDRITAFGEDFLTAETNIRPD
                     NPLIKHGKLATYASIEIMAQAGEPVRLGYLLGTRKLHLHRQEIPIGSQLQIQIKMSIQ
                     DATGFGVFDCQLIDLADNQVLLEGALNVFSPK"
     gene            complement(1742..2964)
                     /locus_tag="PXB09_001356"
                     /pseudo
     CDS             complement(1742..2964)
                     /locus_tag="PXB09_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005544283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3051..3470)
                     /locus_tag="PXB09_001357"
     CDS             complement(3051..3470)
                     /locus_tag="PXB09_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233480.1"
                     /translation="MLRLLSFCFIFLLSACTVLPQIKQLPPQVESVKSFKVENNGQQS
                     LLLIQFYENKWRWIQTDPLGAPIARVWLTKKGWEPDGFVMPNKQAQLLFTALVNALNP
                     HSPPFYLDKGWKIEREKSQFTIWLPDSSKWKVEILGE"
     gene            complement(3532..4221)
                     /gene="rplA"
                     /locus_tag="PXB09_001358"
     CDS             complement(3532..4221)
                     /gene="rplA"
                     /locus_tag="PXB09_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDL5233481.1"
                     /translation="MAKLTKKMKAIKAGVDSTKAYDINEAVEVLKKFATAKFVESVDV
                     AVNLGIDSRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAE
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQ
                     IRYRNDKNGIIHTTIGKADFSAEQLKDNLNALLAALTKAKPTTAKGIFIKKVSISTTM
                     GAGVAVDQASL"
     gene            complement(4226..4654)
                     /gene="rplK"
                     /locus_tag="PXB09_001359"
     CDS             complement(4226..4654)
                     /gene="rplK"
                     /locus_tag="PXB09_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDL5233482.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     RTESLEKGLPIPVVITVYADKSFTFVTKTPPAAVLLKKAVGIKSGSGKPNKDKVGTVT
                     QEQIRQIAETKAADMTGATIETKMKSIAGTARSMGLIVEE"
     gene            complement(4887..5450)
                     /gene="nusG"
                     /locus_tag="PXB09_001360"
     CDS             complement(4887..5450)
                     /gene="nusG"
                     /locus_tag="PXB09_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDL5233483.1"
                     /translation="MSEVEVKENGSKRWYVLQAFSGFENRVAVTLREYIKLHKMEEQF
                     GEVLVPTEEVVENVGGKRRKTERKFFPGYVLVEMEMNDDTWHLVKSVPRVMGFIGGTA
                     DRPAPITKREADRILNRVQETAEKPRHRKEFQPGESILVTEGPFADFSGTVEEVDYEK
                     GRLKVSVSIFGRATPVELEFSQVEKQS"
     gene            complement(5452..5865)
                     /gene="secE"
                     /locus_tag="PXB09_001361"
     CDS             complement(5452..5865)
                     /gene="secE"
                     /locus_tag="PXB09_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDL5233484.1"
                     /translation="MATEIKTKTPEQVEQKGGKSKGANTALWLVAIVFLAVAAVGNAY
                     FSSHFSLIVRVLLLVVLLVGAVALAAITNQGQKAIHFIKESRTELRKIIWPTRPEATQ
                     TTLIVLAMCVVVSLVLWGIDSIIVALITFVTSLRF"
     gene            complement(5978..7000)
                     /locus_tag="PXB09_001362"
     CDS             complement(5978..7000)
                     /locus_tag="PXB09_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5233485.1"
                     /translation="MANGTSRNRRSSGRVTLADVAKVVGVGQMTVSRALRTPEMVSEP
                     LRKRIEEAIIELGYIPHFSARQLASAESHNLVIVTTSISSTENTLILSALRKSVADSA
                     LQMVILIADQESWFQELINHAPQAIVFLNLDCPPNVREWIKNSNIPTVEIGAIKKEPI
                     HLSVGIDSHEAMEKMIHFLVKKGYREIGLLSAKQDLSIFKQYLESWHTTLFAHHISPL
                     KIHHVVEDISFSAGATLLTEALLNWEAIDALVFLSDELACGALYEALRRHMSIPKDLA
                     IAGLGGLEVGSISYPKLTTIAIPYEQMGKIAGKQLLTLLSGKTLSAEEMIVKLPNKLV
                     IRDSAA"
     gene            7231..7500
                     /locus_tag="PXB09_001363"
     CDS             7231..7500
                     /locus_tag="PXB09_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5233486.1"
                     /translation="MKIMAVCGSGLGSSFMMEMNIKKVLAKLGVEAEVSHTDLSSVVA
                     DDADLFVMAKDIAASSNVPKEKLIVVKNIVGLAEFEEKLTAYFNQ"
     gene            7513..8863
                     /locus_tag="PXB09_001364"
                     /pseudo
     CDS             7513..8863
                     /locus_tag="PXB09_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013745980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            complement(8958..10106)
                     /gene="dprA"
                     /locus_tag="PXB09_001365"
     CDS             complement(8958..10106)
                     /gene="dprA"
                     /locus_tag="PXB09_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDL5233487.1"
                     /translation="MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQI
                     GWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLFDENYPFLLKQISTAPPLIYVKG
                     NVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
                     EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIIS
                     GLSLGTLVIEATLNSGSLITARYALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVE
                     GVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKNLPSLTACQQQIYQH
                     ISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY"
     gene            10195..10707
                     /gene="def"
                     /locus_tag="PXB09_001366"
     CDS             10195..10707
                     /gene="def"
                     /locus_tag="PXB09_001366"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDL5233488.1"
                     /translation="MAILDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEG
                     IGLAAPQVGVLKRVITIDIEGDKTNQVVLINPEILESSGETGIEEGCLSIPGHRALVP
                     RKEKVKVKALNRQGEEIIIDADDLFAICIQHEIDHLNGVLFVDHISNLKRQRIKEKMQ
                     KLKKQIARAK"
     gene            10801..11727
                     /gene="rfaD"
                     /locus_tag="PXB09_001367"
     CDS             10801..11727
                     /gene="rfaD"
                     /locus_tag="PXB09_001367"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDL5233489.1"
                     /translation="MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVD
                     LDIADYCDKEDFIASIIAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLH
                     FCLDRQIPFFYASSAATYGGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAES
                     PVCGFKYFNVYGPREQHKGSMASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVA
                     KVNLWAWQNSISGIFNLGTGKAESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFT
                     QADLTNLRAAGYTGTFKTVAEGTAEYMAWLNR"
     gene            complement(11795..12325)
                     /gene="fabA"
                     /locus_tag="PXB09_001368"
     CDS             complement(11795..12325)
                     /gene="fabA"
                     /locus_tag="PXB09_001368"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDL5233490.1"
                     /translation="MNSCTPIIKPSYTYEELLLSGKGELFGEKGPQLPAPPMLMMDRI
                     IEMNQEKGNFEKGYIEAEFDIKPDLWFFNCHFINDPVMPGCLGLDAMWQLVGFYLGWI
                     GGEGKGRALGVGEVKFTGQILPTAKKVTYRIHMKRVVNRKLVMGVADGEVEVDGRVIY
                     TATDLKVGLFQDTTAF"
     gene            complement(12438..14075)
                     /locus_tag="PXB09_001369"
     CDS             complement(12438..14075)
                     /locus_tag="PXB09_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5233491.1"
                     /translation="MTLSLLSSQKLVMQNDFSRLDEKLNFLDFQPQAKQALNQFLQSQ
                     FGALLVLKSELFPEFINEITEYLKKYSVDLPIISKMDFNKNSLFGYSVFLERELKTEY
                     VKGAIHEADKGILIVNIRSLLLDITQWDKLKQALLFGEYEPNSVNHSPYLSAKEKSTF
                     KLILVGEREDISTLSAYDDGLYQFGQYTEIKSYLSLSDNVEQWGGYVQNYAENLINKR
                     LTSTALNQFLQAYIRESESRELVSISPTLLRKHLLGIQNFYPNVTEIDEVKGYFDYLE
                     QQSSILNQYTVGDILTNQLYIETEGEEIGQINGLSVIEFEGIPHSFGEPLRMSCNVQY
                     GDGEITDIERKVELGGNIHSKGIIIAQSCLANLLELPTQLPFSASIAFEQSYGEIDGD
                     SSSLAIFNVLVSALAKVGLPQSIAVTGAIDQFGNVLSVGGVNQKIEGFFNICHARQLT
                     GKQGVIIPAACVSHLSLSSEVVEAVEQGLFKIWTVENVFDAIAILFERDFYDDEKAPN
                     SAQTALFTLIHQNLDERESEETSGSFLSKICKKIKLD"
     gene            14168..14614
                     /gene="matP"
                     /locus_tag="PXB09_001370"
     CDS             14168..14614
                     /gene="matP"
                     /locus_tag="PXB09_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDL5233492.1"
                     /translation="MRYQKLITQETTWKWQYLLKKHREGENITKYEEQSLIDLKVQFL
                     STLQNSPDEVEKWIKSEMTPEQRKKMRQSVRAKRKRFFNAEKQTTKKKSIDLEYSSWL
                     RLSKYAKSQKLTLSEAIVKLTDELENKQLYLEQVAKMKSSLKDLLK"
     gene            complement(14680..15816)
                     /gene="ompA"
                     /locus_tag="PXB09_001371"
     CDS             complement(14680..15816)
                     /gene="ompA"
                     /locus_tag="PXB09_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_119863613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDL5233493.1"
                     /translation="MKKTLVALAVLSAAAVAQAAPQANTFYAGAKAGWASFHDGLTQF
                     DNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNNFGLATELGYDYFGRVRGNTT
                     FSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVDKDSR
                     IKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQ
                     YSPDIHSVSAGLSYRFGQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDA
                     AHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAV
                     GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQVQGSKEVTM"
BASE COUNT         4609 a         3390 c         3043 g         4838 t
ORIGIN      
        1 tttatttaat gtcgccataa tatcctgcgt aaaaatttct tctattcgtt ctaatgccct
       61 taatgtccga tgttcaatat tattttctaa aatcagtctg accgcatttt cattgggttc
      121 aaagtaagaa ggtgtattaa gttggtaagc gttcatttcc tccgccatac gattaacacc
      181 ttcattcagc tctttgaccc aaccaaattc atacagcact cgtgcaatct tcggattgcg
      241 tgaaaaacgg gtatagtaca tattttcaag cgtcacaggg cgaggtaatc cacccggact
      301 aaaaatttcc aaacggtcat caaacatcga aatgcgaatg cagtcccctt gattactgta
      361 actacggtgt gcaatcgcat tgacaatacc ttctaaccaa gcaaattctg gatactcatc
      421 aatttttgtg aattgcccgt tttcatctaa acgttggaac tctcgtaatt ggctttttaa
      481 tactgcctta gcactctcca ataacttagg aataggctct tcaagcataa attctttgac
      541 gacattaaaa gttctaccgg tcagaggtgc tttaccttca taccgcaaaa aacgcaaacg
      601 ggcattagga aaataacgtg tcgggttatt cccaaatagc aaaatacagg cattcgtaat
      661 ttgcccttct ttgttaatta aatctcgggc tttcagaatc tcttctattg agcgatctgt
      721 gtgtaatttc tgtcgatact gttctaataa atccatatcc agatcagtaa aatcagcgcg
      781 tgctatcggt tgctcttcaa aagcacgctg ccctttttcg tactctaatt gcaaacgttg
      841 ttcaaaattg agttccaaag tttgatcttt tgagcgtaga aaaacccgat catcgtgaga
      901 ggtaatcacc ctcccactcg aagctgtaac ttcaaataat aagacaaaat ccgctaaacc
      961 tcgactattt accacctcaa tttgctgata ggtcaccggt atcggcattt tttgtaaatt
     1021 gtgcagagcg tggataaatt cttccggctg atgggctttt tggtagttaa aaccggtaat
     1081 ttcgccatta tcttcaatac caataactaa taaaccgccg tctgcattcg caaaaccaat
     1141 caaatgccgc aaaatctctt tcggttcttt tctcgcactt ttgcgatcaa aggatttatc
     1201 ttctttgcga gtacaaagat gttgaatgtc ataggcctct tgcataacga atttcctacc
     1261 aactactacc aactactacc aactactacc aactactact tactactact tactactact
     1321 tactactact tactactacc aactctattt cggactaaac acattcagcg ccccttctaa
     1381 aagcacttgg ttgtcggcta aatcgatcag ttggcagtcg aatacgccga agccggtggc
     1441 atcttgaata gacattttga tctgaatttg tagctgtgag ccaatcggga tttcttggcg
     1501 gtggaggtgc agtttgcgag tgccgagcag gtagcctaag cgaactggtt cgccggcttg
     1561 tgccataatt tcaatgctgg cgtaggtggc aagttttccg tgtttgatca gcggattgtc
     1621 agggcgaata ttggtttcag cggtcaaaaa atcctcgccg aatgcggtaa tgcggtcgag
     1681 taggatcata ttgccactgt gaggaaccaa tggtgcaatt tgttcgatag ggaaggtgaa
     1741 tttatgcatc gctttctccc aaaatcagta cgctgttatt gccgccaaag gcaaaagagc
     1801 tgcttgcgcc aatccgtctg cctgctgccc aacggctctg ttcatcggtg atcgcaatgt
     1861 tcggcaggtt ttcgtccgct tgtttatccc ataattgcgc agggagcttg ccggtcgggt
     1921 tgtgttggcg acagagcatt ccccacaaaa ttgccgcttc caccgcaccg gcagcccaag
     1981 ggtatgcccg gtgtagggtt tggtggtggt gcaagcggtc tgattaccga agatttttgc
     2041 cacagcgagg ctttccattt gatcgttatg aagcgtccct gtgccgtgca ggttgatcca
     2101 gccgatgtcg gctgcgtcta aatcagcatt gtgcagggca ttttggaaag cggaaattgc
     2161 cccttcccct tcggggtgag gtgaggacat atggtaagcg tccgagctgg aaccataacc
     2221 cagtaactga atgcgatgtt cgtccagtgg ttcacggctc atcacaaaca ccgctgcgcc
     2281 ttcgccgatg ttaatgccgt tacggttagc ggaaaatggg ttggtttgtt ggtttgataa
     2341 cacttccagc gagctaaatc cgctgatagt taaaggcgaa agggtatcca caccaccgca
     2401 aatcaccgca tcgcacaagc cggctttcag taaacgggca gcagaaatta acgctcttgc
     2461 ctctgaggtg caggcggtgg aaatgccgta actcagcccc gttaagccat acacttcggc
     2521 aacgaaatca gacggcgcag agaagagaat ttgctgttga ttaaactgct cggtggcata
     2581 atcgccctgc acaccggctt tgaagacggg aatattttca tcggcgccgg tagtggacgt
     2641 gccgatgatc accgcaatcc gctcacgccc gaattgctcg atacaagcgg taattttcgg
     2701 ctcaatttct gcaagggcgt gccatagcag ttggttattg cggctgcggt gttcaataga
     2761 tagttcaaca ggaaaatcac gcaatctagc agagacttgc cctagaaatt tcggtgaact
     2821 atttgaaata ttatgtcgta aataaggctg tgaagtcgta tctaaaggag atactttcgc
     2881 attaattaaa acattcaaat gctccacgat gccatatcca atcggactgg tgatggcggg
     2941 ctctgataaa tatagtgtca ttattattta ttccagtatt attgtgtaat ggcactaaaa
     3001 ttataaaatt catattcaag tgattcaagc atagaggttc aagttttcgc ttattccccc
     3061 aatatttcca ctttccattt actgctatct ggtagccaaa tcgtaaattg ggatttttcc
     3121 ctctcaattt tccaaccttt atctaaataa aaaggtggag aatgagggtt taatgcattg
     3181 actaaagctg taaataatag ctgtgcctgc ttatttggca ttacaaagcc atctggctcc
     3241 caaccttttt tagtaagcca tactctggca ataggagcac ctaaaggatc agtttgaatc
     3301 caacgccatt tattttcata aaattgaatt agaagcaaac tttgctggcc attattttca
     3361 actttaaagg attttacaga ttcaacctgt ggcggtaatt gcttaatttg aggtaataca
     3421 gtacaagcac taagcaaaaa aataaagcaa aaagataata atcttaacat tcgtacctaa
     3481 agaaaaagac cgtagagtat taacactacg gtcttttgat tctattaaaa attaaagtga
     3541 tgcttgatca accgcaacac cagcacccat tgtagtagag atgcttactt tcttgatgaa
     3601 gatacctttt gctgttgttg gttttgcttt tgttaaagca gctaacaatg cgtttaagtt
     3661 atcttttaat tgttcagctg agaagtctgc tttaccgata gtagtgtgga taataccgtt
     3721 tttgtcgtta cggtagcgga tctgaccaga tttcgcattt ttaaccgctt ctgcaacgtt
     3781 tggtgttact gtacctactt tcgggtttgg cattaagccg cgtggaccta atacttgacc
     3841 taattgacct acaacacgca ttgcatctgg agaagcgata acaacatcaa agttcatttc
     3901 gcctttcttg atttgctctg caagatcttc catacccact aagtcagcac ccgctgcttt
     3961 tgctgcttct gcgtttgcac cttgtgtaaa cacagcaaca cgagcggtac ggcctgtacc
     4021 gtgtggtaat acggttgcac cacgcacgtt ttggtctgat ttacgagaat cgatacctaa
     4081 gtttacagca acgtccacgc tctcaacgaa tttagcggtt gcgaattttt ttaacacttc
     4141 aactgcttcg ttgatgtcat aagctttagt agaatctacg ccagctttaa ttgctttcat
     4201 ttttttagtc aatttagcca ttgtattatt cctctacgat taagcccatt gagcgagctg
     4261 taccagcgat tgatttcatt ttggtttcga tagtcgcacc agtcatatct gctgctttag
     4321 tttcagcgat ttgacggatt tgctcttgag ttactgtacc cactttatct ttgttcggtt
     4381 taccagaacc agatttgata cctaccgctt ttttcagtag cactgccgcc ggtggagttt
     4441 tggtaacgaa tgtgaaagat ttatcagcgt aaactgtgat aacaaccgga atcggtaaac
     4501 ctttctctaa gctctcagta cgagcgttga atgctttaca gaattccata atgttaacac
     4561 cttgttgacc taatgcagga ccaaccggtg gtgatgggtt agccataccc gctgcaactt
     4621 gcagtttaac gtaggcttgg actttttttg ccattttaat tttcctctaa atgggtgata
     4681 acgctgaaaa tcagctcccc tgttacataa aaaatacgag tcagcaggct ggctcgtaat
     4741 aggtcgcaaa ttttaaagaa tttgcgacta tttttcaagc aaaactttcg ctttgttgaa
     4801 taaatcttgt tacaagcggt cttttttccg ctgaattttg caaaaaattg agaaaaataa
     4861 ccgcttgtgt gtgaaattaa ttgaaattag ctctgctttt ccacttgact gaattctaat
     4921 tctaccggtg tcgcacgacc aaaaatcgac accgatactt ttaagcgacc tttttcgtaa
     4981 tccacttctt cgaccgtacc ggagaaatct gcaaacggac cttctgtaac caaaatgctt
     5041 tcgcccggtt ggaattcttt tctgtggcgt ggtttttccg ctgtttcttg tacacggttt
     5101 agaatgcggt ctgcttcacg tttggtaatt ggtgcggggc gatctgccgt accaccaata
     5161 aagcccatta cacgaggcac acttttcact aaatgccaag tatcgtcatt catttccatt
     5221 tcaaccaata cataacctgg gaagaattta cgctcggttt tacggcgttt accgcccaca
     5281 ttttcaacga cttcttcggt tggcactaat acttcaccaa actgctcttc cattttgtga
     5341 agcttaatgt attcacgcaa tgttactgcc acacggtttt caaagcctga aaacgcttgt
     5401 aatacatacc agcgttttga gccattttct ttcacttcta cttcactcat tttagaacct
     5461 taaacttgtt acaaatgtaa ttaatgcgac gatgattgag tcaatacccc ataaaaccaa
     5521 ggaaactact acgcacattg ccaatacaat caaggtggtt tgtgttgctt cagggcgtgt
     5581 cggccagata attttgcgta gttcggttcg agactcttta ataaaatgaa ttgccttttg
     5641 cccctgattt gtaattgccg ctagtgcaac agcaccaact agcaacacca ccaataaaag
     5701 cactcgaaca attaatgaaa aatgagatga aaaataggca ttacctaccg cagcaactgc
     5761 taaaaataca atcgcaacca gccataatgc tgtatttgca cctttgcttt tccccccttt
     5821 ttgttcgact tgctcggggg tttttgtttt aatctcagta gccatatata acctaaaaaa
     5881 tgaataaaaa aatcagaaat tattttaaag cgttaaattc tatcattttc tacaagactt
     5941 gccacgatct tttatagatt tttatgcaaa atcaatatta tgcggcgcta tcacgaatca
     6001 ctagcttatt cggtaattta acaatcatct cttctgctga taaggtttta ccactcaaaa
     6061 gagtaagtag ttgtttacct gctatttttc ccatttgctc gtaagggatc gcaatggttg
     6121 tcaatttagg gtaggaaata ctccccactt ctaaaccacc taaaccggca atcgcaagat
     6181 cttttggaat gctcatatgt cggcgtaatg cttcatataa tgctccgcaa gccaattcat
     6241 cggataaaaa aaccaatgca tctattgctt cccaatttag aagggcttca gtcaacaaag
     6301 ttgctcctgc cgaaaacgaa atatcctcta ctacgtggtg gatttttaaa ggagaaatat
     6361 gatgtgcaaa taaagtcgta tgccaacttt ctaaatattg tttgaagatg gataaatctt
     6421 gcttcgccga taacaatcca atctctcgat agcctttttt caccaaaaaa tggatcattt
     6481 tctccattgc ttcgtggcta tcaattccaa cactgagatg aatcggttct ttttttatcg
     6541 cacctatttc tacggtaggg atattgctgt ttttaatcca ctcacggaca ttaggagggc
     6601 aatctaaatt caaaaacact atcgcttgag gagcatgatt aatcagttct tgaaaccaag
     6661 attcttgatc agcgatcaaa atcaccattt gcaatgcgga atccgccacg cttttgcgta
     6721 atgccgataa aattaaggta ttttccgttg agctaatcga cgtcgtcaca atgaccaaat
     6781 tatgtgattc tgcagaagct aattgccgag cagaaaaatg cggaatatat cctagttcaa
     6841 tgattgcctc ttcaatccgt ttacgtagtg gctccgacac catttctggt gtacgcaaag
     6901 cacgagatac cgtcatctgc ccaacaccaa caactttggc tacatcagct aaagtgactc
     6961 tgcccgaaga tcttcgattt ctacttgttc catttgccat actattttcc taattgttcc
     7021 atattatagg gctaaatcct taattttcct atttagaaag aacagagcaa aatgccaact
     7081 gattattttt tatctaatta aatactaaaa atgttaacgc tatcacattt ttaatatttt
     7141 ctgtttgata gcgttaacat ttctattcta tagtatttct atagttcaaa attcagacaa
     7201 ctattcattc acctttaatg gagatttact atgaaaatta tggcagtatg tggttccggc
     7261 ttaggtagca gctttatgat ggaaatgaac attaaaaaag tattggcaaa actcggtgtc
     7321 gaagcggaag tgagtcatac cgacctttcc tctgttgttg ctgatgatgc tgatttattt
     7381 gtgatggcaa aagatattgc cgcaagcagc aatgtgccga aagaaaaact catcgtggta
     7441 aaaaacattg ttggattagc agaattcgaa gaaaaattga ccgcttactt taaccaataa
     7501 cggagatgtt atatggaatc gctactcttt tttatattag atattctcaa agtgccttcc
     7561 gttctagtgg gtttaattgc tctggtcggt ttagttgcac agaaaaaatc ggtatccgat
     7621 attgttaaag gaacaatcaa aactatttta ggcttcttag tgttaagcgg tggtgcaaca
     7681 gtacttttaa gctccctgac tcctttaggc ggtatgtttg aacacgcctt caacgtgcaa
     7741 ggcattatcc ctaataacga agcgattgtg tctatggcaa tcgaaaaata tggtacggcg
     7801 actgcgttaa ttatggcatt cggtatggta gccaatattt taattgcacg ttttacccgc
     7861 ctaaaattca ttttcttaac cggacaccat accttctata tggcgtgtat gatcggcgta
     7921 atcctaaccg ttgccggctt tgaaggtatt cagctcgtct ttgtcggggc attaacctta
     7981 gggttaatta tgtttcccga ctatcgctca cttctatatg aaaaaagtga ccgctagcaa
     8041 tgatgttgcc ttaggtcatt tcggcacatt gggctacgtg cttgctggtt caatcgggca
     8101 actggtagga aaaggctcta aatctaccga agaaatggat ttacctaaaa acctcggctt
     8161 cttacgtgat agctccattt ctatttcact cacgatgatg gcgatttact atattctcgc
     8221 ccttgcttcg ggcagtgaat acgtttctac attaagcggc ggacaacatt atttagtgta
     8281 tgccaccatt caagccatca cttttgcagc cggtgtttat gtcattttgc aaggggttcg
     8341 tttaatttta gccgagatcg tcccggcatt taccggcttc tccgaaaaat tagtacctga
     8401 tgccaaaccg gctctcgact gcccgattgt tttcccttac gcccccaatg cggtattagt
     8461 tggatttctt gccagtttct taggtgggat tttaagctta gccattctag ggcaacttaa
     8521 ttgggtgtta attttaccgg gcgtagtgcc acacttcttc tgtggggcaa ctgccggcgt
     8581 atttgggaac gccaccggcg ggcgtcgtgg tgcaattatc ggtgctttta ttcacggcat
     8641 attaattacc ttcttgcctg tattcttatt acctgtactg ggttcattag gctttgctaa
     8701 caccactttc tctgactcag acttcggcgg tattgggatt gtgttaggct atatggctca
     8761 atacttcgac aagaatatca ttacgctcat tattgtcggc ttattcgctc tgttggtagc
     8821 ctataattat ttggcgaaaa aaccggcaaa actgaatacc taattaaaat caggtgttat
     8881 ttgctgcctg cgaggaatct tccctgccat ttcttgatgg tagggaattt tgtttagtta
     8941 aacgacaacg ctcttgttca atacccatta tccatcacat accccccact cacttgttta
     9001 atcacaccgg ctaattccag acccagtaat tcaaccagca atatttcaat cgtcaactcc
     9061 gtaactttgg ctaaatcatc aattgccatc ggctctaagc tgatatgctg ataaatttgc
     9121 tgctggcaag cggtcagact tggcagattt tttgcgaatt tttcgctgtt tttgaccgct
     9181 tgtaaagatg tgcttactgt tggcttagac tcatcaaaca aagggatttg ctgaggttga
     9241 tattgcgagg cgaccacctc taaaatatct tccacacctt ccacgagcaa tgccccttct
     9301 ttaattagct tgtggcaacc ttgtgcgtaa gggttttgta ccgcattcgg taacgcaaac
     9361 acttccctac cttgttcaag ggcataacga gcggtaatca gtgaaccact attaagcgtt
     9421 gcttcaataa ctaaagtgcc gagcgataag ccactaataa ttcgattacg acgaggaaaa
     9481 ttttctgcca ccggcggctg attaggcgag aactccgaca ccaatgcacc acctaaatca
     9541 acaatttgtt cggctaattt tttatggcga gcaggataga cttgatttaa tccactccct
     9601 aacacggcaa tcgttatgcc ttgttccata acgatttttt gatgggcaaa accgtcaata
     9661 ccaatggcta aaccgctggt aatgataata ttatggcgag ctaattcggc agcaaattgc
     9721 ccagcccaat attcaccata atgagaatag tctcggctgc caacaatcgc aatttgtggc
     9781 agagaaaggc tttccacatt tccctttaca taaattaacg gtggcgcagt cgaaatttgt
     9841 tttaagagaa acggataatt ttcatcaaag agtgtcacaa tttgctgatt tggcaattct
     9901 gaccaagtca tcgcctgatc aatccacttt tgatcaggat taaaccaacg ttgaatttgc
     9961 ttttcattcc aacctatttg tttgagttga agtttgtcat agtggcaaaa ttcagcaaaa
    10021 ttgagttccg ccaataatcg ccctatacgt tgagccccca tttgcggcac ttgtaataat
    10081 cgtaataaat cgtagtgata tgccatattt tcatcctcaa aatttcccta ataataagaa
    10141 aaggtttaaa atagccaaac gaatttttta aacttttcga gagagatcac aaaaatggca
    10201 atattagatg ttgtgcttta ccccgatgag aaactggcaa ccgtttgtga accggtggaa
    10261 caggtggacg aagcactgaa tcgttttatc gatgatatgt ttgagacaat gtacgaacac
    10321 gaaggtattg gcttagctgc accgcaagtg ggcgtactta agcgtgttat tactattgat
    10381 attgagggcg acaaaaccaa tcaagtggtg ttaattaacc ctgaaatttt agaaagcagc
    10441 ggtgaaaccg gcattgaaga gggctgtctc tccattcccg ggcatcgtgc cttagtgcca
    10501 cgcaaagaga aagtgaaagt caaagccctt aaccgccaag gcgaagaaat tatcatcgat
    10561 gccgatgatt tatttgcgat ttgtattcaa cacgaaatcg accatttaaa cggcgtgctt
    10621 tttgttgacc acatatccaa tttaaaacgc caacgcatca aagaaaaaat gcaaaaattg
    10681 aaaaagcaaa ttgcacgagc gaaataacca ggcacaagcg gttaaaatgg cttaaaaatt
    10741 tgcaaattaa gtgtgatgac acgataataa ccacagttca actttagaaa ggataaaaat
    10801 atgattatcg tcaccggcgg cgcaggtatg attggcagta acattgttaa agccttaaat
    10861 gaaatcggtc gcaaagatat tttagtagta gataacctca aaaacgggga aaaatttatc
    10921 aacttagtgg acttagatat tgcggattat tgcgataaag aggatttcat cgcctctatt
    10981 atcgccggcg atgattttgg tgagattgat gcggttttcc atcaaggggc ttgctcggca
    11041 accaccgaat gggacggcaa atacttaatg caaaataact acgaatattc aaaagagtta
    11101 ttgcattttt gcttagatcg ccaaattcct ttcttctatg cctcaagtgc ggcaacctat
    11161 ggcggacgtt cggataattt tatcgagaaa cgggagtttg aaggtccatt aaatgcttat
    11221 ggctactcca aattcctgtt tgatgaatat gtccgccgta ttttgcctga ggcagaatca
    11281 ccggtctgtg gtttcaaata tttcaacgta tacgggcctc gtgagcaaca caaaggttca
    11341 atggcaagcg tggcattcca cttaaacaac cagatgttaa aaggggaaaa tccaaaacta
    11401 tttgccggct cagagcagtt cttgcgtgat tttgtttatg tggaagatgt ggcaaaagtg
    11461 aatctttggg cgtggcaaaa cagcatttct ggcattttca acctcggcac cggaaaagcg
    11521 gaatctttcc aagaagttgc gaatgcggtt atcaaatacc acggcaaagg cgaaattgaa
    11581 accatcccat tcccggatca tttaaaatcc cgctaccaaa cgttcactca agcggactta
    11641 accaacctaa gagccgctgg ctacacaggc acatttaaaa ccgttgctga aggaacagcg
    11701 gaatatatgg cgtggttgaa tcgctaatca aacgttgtta aaaaagcaga aagagctacg
    11761 aaatgtagct ctttttgtta taaggttata aggattagaa tgctgtcgta tcttggaata
    11821 agcctacttt taaatcagta gcagtataga tcactcgccc gtccacttcg acttcaccat
    11881 cagcaacccc catcactaac ttacgattga ccacacgttt catatggata cggtaagtaa
    11941 cttttttcgc tgtcggtaaa atttgtccgg tgaattttac ttcacctacg cccaatgcac
    12001 gccctttgcc ttcgccacca atccagccga gataaaaacc aaccagttgc cacatcgcat
    12061 ctaagcctaa gcaacccggc attacaggat cgttaataaa atggcagtta aaaaaccata
    12121 aatccggttt aatatcaaac tcagcttcaa tatacccttt ttcaaaattg cctttttctt
    12181 ggttcatttc aatgatgcga tccatcatta acatcggtgg agccggcaat tgaggccctt
    12241 tttcaccgaa taattctcct tttcctgata gcaaaagctc ttcgtaagta tagcttggtt
    12301 tgataattgg tgtacaactg ttcattattt ttaaaatcct gtaaagtgaa aaaagcctgt
    12361 tatatcaata actgataaat caggctgata gtaacagact tttaattcag tgaacagttg
    12421 taagctgact tgtcggatca gtctagcttt atctttttgc aaattttgct taaaaatgaa
    12481 ccgcttgttt cttcactttc ccgctcatct agattctggt gaatcaaggt aaataatgct
    12541 gtttgggctg agttaggggc tttctcatca tcataaaaat cccgctcaaa cagaatcgct
    12601 atggcatcaa acacattttc caccgtccaa attttaaata gaccttgctc cactgcctca
    12661 acaacttctg aacttaaact caaatggcta acacaggccg ccggaataat cacaccttgt
    12721 ttccccgtta attggcgagc gtgacaaata ttaaagaagc cttcaatttt ctgatttacc
    12781 ccgcccacgc ttagcacatt cccaaattga tcgatagcac ctgtcaccgc aatagattgt
    12841 ggcaagccaa ctttagctaa ggcactcact agtacattga aaatcgcaag agaagaacta
    12901 tccccatcaa tttcaccata ggattgttca aaagcaatcg aagctgaaaa cggtaactgg
    12961 gttggtagtt ctaacagatt cgctaaacaa gattgagcga taataatacc tttggagtgg
    13021 atatttcccc ctagctccac tttacgctca atatctgtaa tttcgccatc accatattgt
    13081 acattacaac tcatgcgtaa gggctcgcca aaactatgcg gaatgccttc aaactcaatg
    13141 accgataagc cattgatctg cccaatttcc tctccttcgg tttcaatata aagttgatta
    13201 gtcagaatat cacccaccgt atattgattt aatatcgatg attgctgttc taaataatca
    13261 aaataacctt ttacctcgtc aatttcggtc acatttgggt aaaaattttg aattcctaat
    13321 aaatgttttc tcaataatgt aggggaaata gacaccaact ctcggctttc actttcacgt
    13381 atataggcct gtaaaaattg attaagcgct gtggaagtta atcgcttatt gatgagattc
    13441 tcagcataat tctgaacata acctccccac tgctccacat tatccgataa tgataagtag
    13501 gattttattt cggtatattg cccaaattgg tacaacccat catcataagc agataaagta
    13561 gaaatatctt ctctttcccc tactaaaatc aatttaaatg ttgatttctc tttagccgat
    13621 aaatagggtg agtgattaac agaatttggc tcatattcac caaataataa tgcctgtttt
    13681 agcttatccc attgggtaat atccaataag agcgaacgga tattaacaat taaaattccc
    13741 ttatctgcct cgtgaattgc acctttaaca tattctgttt tcagctctct ttccaaaaac
    13801 acagaataac caaatagact atttttattg aaatccattt tgctaataat cggcagatct
    13861 acactatatt ttttcagata ttccgtgatt tcattgataa attccggaaa aagctcagat
    13921 tttaagacta ataaagcacc aaactgagat tgtaaaaatt gatttaacgc ttgttttgct
    13981 tgaggttgaa aatctaaaaa attcaatttc tcatctaaac gagagaaatc attttgcatt
    14041 actaattttt ggctactaag taaagaaagg gtcacaaatc tgcctcatta ttgaaaattt
    14101 ggtttattat acaaaattcc gctatacttg ctaaatatag cttacttttt cctatcatat
    14161 tcagattatg cgatatcaga aactcatcac ccaagaaaca acttggaaat ggcaatatct
    14221 cctaaaaaaa catcgtgaag gagaaaatat tactaagtac gaagaacaaa gcttgatcga
    14281 tttaaaagtt cagttcctct ctactttgca aaactctccg gacgaagtgg aaaaatggat
    14341 taagtcggaa atgacgcctg agcaacgtaa gaaaatgcgt caatcagtac gcgccaaacg
    14401 caaacgcttc tttaatgctg aaaagcaaac aaccaagaaa aaatccattg atttagagta
    14461 ttcgagctgg ttaaggctct ctaaatatgc caaaagccaa aaactaacgc tttctgaagc
    14521 tattgtcaaa ttaaccgatg aactcgaaaa taaacaactt tacttagagc aagttgctaa
    14581 aatgaaatca agtttaaaag atttactgaa ataaaaaaag aaaaaagccc actaacaagc
    14641 gggctttttt tgattcaatt tttcaactga ataactatat tacatagtta cttcttttga
    14701 accttgaact tggatttcaa cacgacgatc tggtgctaag caagcgatta atgctttacg
    14761 acctttaact gcatcacatg tgtgaccagt tactgggttt gcttcaccgt aacctacagc
    14821 tgttacatta gctgggttag tacctttaga aacgatgtaa ttagctactg tttcagcacg
    14881 acgttgtgaa agttttaagt tagatgcttc tttaccgatg cggtctgtgt aaccattaac
    14941 ttggatagct aggtttgcta agcctaagtt gctgatttca gcgtgtgctg catctaaaga
    15001 agttgctgct gctggtttta agcttgattt accgaaatca aataaaacat cagagctgaa
    15061 tgcgaagttt ttagttacaa cttctggtgc ttcaactggt gctgcacctt gaccgaaacg
    15121 gtatgataaa cctgcagata ctgagtggat atctgggctg tattggaaat ttgtacctct
    15181 tggtattaga taaccaactg ttgtacgaac tgccttatct aagttaccaa cacgatttaa
    15241 gtattgatat tcaacacgag cagctaattc aggagtaatt gcatactcaa gaccagcacc
    15301 taataataga gatggtttta agttgtgaac tttaatgcgt gaatctttat ctacatgttg
    15361 ttgtacgtag taatcgttgc gaactaatgc aacacctact ttaccgtaaa catctaagtt
    15421 aggaacaact tcgtagcttg gttttaagct taagtgcgca ccgtgagctg aatgtttagc
    15481 cgcagttttt tctttatcat caccagaaaa tgtagtgtta ccacgaacac gaccaaagta
    15541 gtcataacct aattctgtcg ctaaaccaaa gttgttttgg tttaagattt ggtaaccacc
    15601 gaatacaccg taagttacag agttacggtt aataccgagg ttaataccga ggttaatacc
    15661 ggatccataa tcatatgtgt tgtcaaattg agttaaaccg tcgtggaatg atgcccaacc
    15721 agctttagca cctgcgtaga aagtgttagc ttgtggagct gcttgagcta ctgcagctgc
    15781 tgataatact gctaatgcaa ctaatgtttt tttcattttg atgatcctct taaatattgt
    15841 catcgattaa aataaattct taatacccac aaaaagtatt
//
LOCUS       DANLTI010000056        15319 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.056, whole genome shotgun sequence.
ACCESSION   DANLTI010000056 DANLTI010000000
VERSION     DANLTI010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15319
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.056"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            22..879
                     /locus_tag="PXB09_001372"
     CDS             22..879
                     /locus_tag="PXB09_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233494.1"
                     /translation="MDKLNAISLFCKVIETQSFTQAAQQAQISLPMASKLVAQLEEHL
                     NVRSEAGLLYYQQCLPILNELKEADASVSNINSTLQGKITMSVPMDFGSRFIAPYLGK
                     FMEDYPNLALHIEFSDRRVDVIAEGFDLVLRIGSLADSSIVAKKIADSHLVLVASPDY
                     LARFGEPKGLEALVERDCLLYEYHPQWQFSQQGQKMQIKPQGKIYSNNGYALVQMAKA
                     GLGIINIPKFLIKHELKNGELIPIMPFLTQEPLQISLLYPNRRYLSPKVRILIDFFTQ
                     LMQEQKEYI"
     gene            complement(929..1189)
                     /locus_tag="PXB09_001373"
     CDS             complement(929..1189)
                     /locus_tag="PXB09_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDL5233495.1"
                     /translation="MGWIAAIIVGAIIGWIASAVMKSEGGLCKNIIIGILGSSLGRWV
                     FGDVLGIGSAYSAGDFNIVGIFFGVLGAALLIFILRKLSIIN"
     gene            complement(1269..2228)
                     /locus_tag="PXB09_001374"
     CDS             complement(1269..2228)
                     /locus_tag="PXB09_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233496.1"
                     /translation="MKFHKTLLVTLLSSLSVAALAQDKIQNVAITAIVEHPALDSIRK
                     GVIEELAREGFVDGKNIKIDYQSAQGSTATAAQIARKFVGDKADIIIPITTPSAQPVV
                     AATRSIPIVFSGVTDPVAAKLVKSWEPSGTNVTGISDHKAMAPQVKLIQTLVPDLKAV
                     GYVYSAGEVNSAIVLEELKQEAQKQGFTIVPVAVQRSADIGTAARSLNGKVQAIYISE
                     DNAVVSAYEALHKAALEAKIPVIAADRDTVQRGAVAAYAVNQYDIGVATGKVAARVLK
                     GEKAGTIPIQEVSKLELSINTKTAKELGITIPEVLIKEAKQTF"
     gene            complement(2425..2832)
                     /locus_tag="PXB09_001375"
     CDS             complement(2425..2832)
                     /locus_tag="PXB09_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDL5233497.1"
                     /translation="MKPLRPYLYNAYYNWIIDSDNTPYLLVNAEFPDVDVPVEFVKEG
                     KIILNISPRSIGQYIVADEYISFSARFQGMLRDIYIPFGAMVAIYAQETGDGIMFQEE
                     AYYTEEAYQARVRAVEQPKKIKAKKTSTLKLVK"
     gene            complement(2832..3476)
                     /gene="sspA"
                     /locus_tag="PXB09_001376"
     CDS             complement(2832..3476)
                     /gene="sspA"
                     /locus_tag="PXB09_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDL5233498.1"
                     /translation="MTSSINKRSVMTLFSDKNDIYSHQVRIVLAEKGVPYEIENVMLG
                     SISEDLLELNPYGNIPTLVDRELVLFNPRIIMEYLDERFPHPPLMPVYPVSRGQCRLN
                     MYRIEQDWYSQIDIVNKDPESAEGKKALAQLKEDVLALAPIFAAKPYFMSDDFSLVDC
                     YIAPLLWRMQILGVKFSGATAKPINAYMTRVFQRDSFIQSVGGEAPKHLMDDKD"
     gene            3650..4147
                     /gene="purE"
                     /locus_tag="PXB09_001377"
     CDS             3650..4147
                     /gene="purE"
                     /locus_tag="PXB09_001377"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDL5233499.1"
                     /translation="MPNKAEIAIVMGSKSDWATMSEATQILDQFGLSYHVEVVSAHRT
                     PDKLFSFAETAETNGYKVIIAGAGGAAHLPGMIAAKTIVPVLGVPVKSSMLSGVDSLY
                     SIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAAFNPDIAEKLRIFRQTQTQMVLDNP
                     DPRVE"
     gene            4162..5127
                     /locus_tag="PXB09_001378"
     CDS             4162..5127
                     /locus_tag="PXB09_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDL5233500.1"
                     /translation="MSKKLLILHTGGTISMKEGEDGKVSPSNENPLLAALERLNHPAK
                     LAQESLFNIPSPHINIEHWQQLKMRIEKAVNEENVDGVVITHGTDTLEETSYFLDLAL
                     SVNIPVVITGAMRSSNELGADGLINLQSAILVALNEESRDKGVLVVMNDEIHNAKFVT
                     KTHTTNVATFQTPTFGPCGLVTKESVIFFQKLTTYERYPIQQVTKANVQLLKAYAGMD
                     SFLLEQLAKSKCDGVVIEALGAGNLPPSCLAGIEALVNANIPIVIVSRAFNGITQDVY
                     DYVGGGKQLKQKGIIFTKGLSGQKARIKLMVLLSQTLDKPLSDYF"
     gene            5146..6234
                     /gene="purK"
                     /locus_tag="PXB09_001379"
     CDS             5146..6234
                     /gene="purK"
                     /locus_tag="PXB09_001379"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDL5233501.1"
                     /translation="MQKSAIYPPVYVLGNGQLGRMLRYAGAPLDIEVKPLAFDAPVFD
                     IEPNSIITAEIERWADTPLTQLLGNHPNFVNLNVFGKLADRFTQKSLLDELHLATSKW
                     QLLENAEHWQDIFQHIGEKVVVKRRTGGYDGRGQWIVTQDSIHQITPELFGEVIAEKF
                     IPFEGEISIVGARFRDGSTRFYPISHNLQQNGILRYSVSDVNLPNQALYQQQAEQMLA
                     TVMQKLEYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRALLDL
                     PTPALDQIAPSVMVNLIGIEHNKQWLSLPFSQLHWYGKEVRAGRKVGHINLTHTDKNG
                     LIELLEQLRPSLTEDFHSGLDWAINKLK"
     gene            complement(6455..6865)
                     /locus_tag="PXB09_001380"
     CDS             complement(6455..6865)
                     /locus_tag="PXB09_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233502.1"
                     /translation="MISRSLFSKLILFAKIVIFSQLVFMVVIWIAHHIMREYSNPFER
                     FGTLFNNVFLTFIIPMMVSSAVIVYKGYTQKNEDKVFWIYMGFFLIWILGFIYFEPAV
                     YDKSLKISGAGFGAMLSIIICSKLLPKETNKEQL"
     gene            complement(6868..8886)
                     /gene="uvrB"
                     /locus_tag="PXB09_001381"
     CDS             complement(6868..8886)
                     /gene="uvrB"
                     /locus_tag="PXB09_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDL5233503.1"
                     /translation="MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVT
                     GSGKTFTIANVIAKLNRPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPE
                     AYVPASDTFIEKDASINEQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQM
                     MLHLQVGAMIGQREILSRLAELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVE
                     LFDDEIENLSLFDPLTGHSLGKVPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTY
                     FIKENKLLEEQRIAQRTQFDIEMMNELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPA
                     DGILVIDESHVTVPQIGGMYRGDRARKETLVQYGFRLPSALDNRPLRFEEFERLSPQT
                     IYVSATPGAYELEKNPDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIHKRVAVDER
                     VLVTTLTKKMAEDLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLRMGMFDVLVGINLL
                     REGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDRITNSMQKA
                     ITETERRREKQMKYNEEHGITPQALNKKVGELLDIGQSDKPKRGKQAVKKAENSATDY
                     KPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRDKLQHLKAYLLEV"
     gene            complement(9125..9361)
                     /locus_tag="PXB09_001382"
     CDS             complement(9125..9361)
                     /locus_tag="PXB09_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5233504.1"
                     /translation="MSRTTSVTLAEPLSQFVNQMVESGRYGSTNEVISAALKILEAQE
                     QQLIQLRALIDEGLESGVSEETVQSIISKAKRNV"
     gene            9524..10369
                     /locus_tag="PXB09_001383"
     CDS             9524..10369
                     /locus_tag="PXB09_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EfeM/EfeO family lipoprotein"
                     /protein_id="HDL5233505.1"
                     /translation="MFLLKGNFYAFNQTCFCTFALSGFFVATQAAALDLTKETEAYKQ
                     FVVEQIDQLVTDTEKFVGYLNKGDVQKAKKIYPLARMYFERSEPIAESFGDLDPRIDA
                     RLADLAEEGKTEKDWSGFHKIEKVLWQKNTTKGTKATAEQLLKDVKELRAKIPTAEVT
                     PEPMITGAVDLLNEVSTTKVTGEEEIFSKTDLYDFKANIEGAEKIYEIFKTQLEQIDA
                     KLSTEIGSRFAAVNALLAKHNKSKTGYDYVPYNKLSKADIKALAEAVNQLGEPLAQLG
                     VLLNK"
     gene            10380..11576
                     /gene="efeB"
                     /locus_tag="PXB09_001384"
     CDS             10380..11576
                     /gene="efeB"
                     /locus_tag="PXB09_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDL5233506.1"
                     /translation="MMAETTSRRDFLKHTALVGAGLLSAPAFALESRQISEKSQNQYD
                     FYGKHQAGIVSPAQKHIYFLVLDLDTTDIAKVKTLFQNWTEYSRNLTLGKNVKPYSAN
                     AYVPPADTGEADSLSAQNLTLTFGVSANFFTKLGIEKHKPKELNDLPHFPRDQLQAEY
                     TGGDICIQACADDPQVAFHAVRNLVRVARGEIKMKWSQMGFNSFANQDTPRNLFGFKD
                     GTANAESLKDQENTVWVQQEGWLKGGSYLAVRRVKMFLETWDRTHLQSQEETFGRHRD
                     SGAGIGHQHEFDKLDLAKKDEKGNAVIPEVSHAHLANKTGLKILRRSFSYSSGIDDKG
                     QFDSGLLFVSFQQSPEQFIKIQNALGNVDKMNEYITHIGSGLFACFAGVKDENDYLGK
                     ALFDLI"
     gene            11587..12206
                     /locus_tag="PXB09_001385"
                     /pseudo
     CDS             11587..12206
                     /locus_tag="PXB09_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+/Pb2+ permease"
     gene            complement(12242..13060)
                     /locus_tag="PXB09_001386"
     CDS             complement(12242..13060)
                     /locus_tag="PXB09_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HDL5233507.1"
                     /translation="MKYDLHAHSTASDGVLSPTELVQRAVEQGVTMLALTDHDTISGI
                     QEAKNFAQNQPLELISGVEISILWQEKSIHLAALNIDENNEELVKFLDNQAQLREERA
                     VEIGEKLAKVGIANAYEGAKALATGEVTRAHYGRFLYEQGYVRNIEHAFKRYLGMGKP
                     AYVKPRWSSLEDAVNVTHTSGGVISIAHPLRYKMTARWIRRLIADFKQAGGDGIEVSG
                     CGQTPDQRQLLARWAKEFDLYGSVGSDFHYPTGWIELGKSLELPQECKPIWTLF"
     gene            complement(13072..13671)
                     /locus_tag="PXB09_001387"
     CDS             complement(13072..13671)
                     /locus_tag="PXB09_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HDL5233508.1"
                     /translation="MTMDNLPLEQHPFDPILPEQATVVMVGTFPPTSEKRCMEFHYPN
                     FQNDMWRIMGNIFYADPNYFRVGEEKRFDPIRIEAFLREKGVALCSSAKTAIRLKGNA
                     SDKDLKIVDPIDMDELLLKLPKLKWLFTTGGLATDTLLGLLPEKHKAPKTNEWVVYPY
                     SATRELYLYRLPSTSRAYPLSLANKTEAYRQFFRTAGLI"
     gene            complement(13668..15215)
                     /gene="sbcB"
                     /locus_tag="PXB09_001388"
     CDS             complement(13668..15215)
                     /gene="sbcB"
                     /locus_tag="PXB09_001388"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDL5233509.1"
                     /translation="MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVM
                     FFCKQTPDYLPSPEAVMVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIR
                     YDDEMTRYTFFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSF
                     KLENLTKANGIAHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLID
                     TGEMTPLVHVSGMLGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLR
                     QRLYTKRDELAENELPVPLKLVHINKCPILAPAKTLLPENAERLGIDRALCLENLKTL
                     KAQKSLIREKVIEIFNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANH
                     GLKFEDPRVEALLFHYRARHYPQTLSRAEQIKWQKHCNQQIEAKAAQFAQSIDDLFQQ
                     HHDNPEKVKLLENLTAYAEQISQQQAVIYRQNVAKDEKLLSELNRVAEQPLDKTEKLK
                     MLKELIK"
BASE COUNT         4556 a         3323 c         3045 g         4395 t
ORIGIN      
        1 acaatataaa gaagagagaa aatggataaa ctaaacgcaa tcagtttatt ttgtaaagta
       61 attgaaaccc aaagtttcac tcaagcagca caacaagctc aaatttcgtt acccatggca
      121 agtaaattgg tggctcagtt agaagaacat ctcaatgtgc gttctgaggc agggttgctc
      181 tactatcagc aatgcttgcc tattttaaat gaactaaaag aggccgatgc cagcgtaagt
      241 aatattaact caacgctaca agggaaaata acaatgtctg taccaatgga ttttggctct
      301 cgcttcattg ccccttacct tgggaaattt atggaagatt accctaattt agcccttcat
      361 attgaattta gtgaccgtcg ggtagatgtg attgcagaag gctttgattt ggtgctgcgt
      421 attggtagcc ttgcagatag ttccattgta gcgaaaaaaa ttgcagattc ccatttggtt
      481 ttagttgctt ctccagatta tttagctcga tttggcgaac ctaaaggctt agaagcatta
      541 gtggaacgag actgcctact ctatgaatac catcctcaat ggcaattttc tcaacaagga
      601 caaaaaatgc aaattaaacc acaaggtaaa atttacagta acaatggtta tgcgttagta
      661 caaatggcaa aagctggttt gggcatcatt aacattccaa agtttttaat aaaacacgag
      721 ctaaaaaacg gagagttgat tcctattatg ccttttttga cacaggaacc tttacaaatc
      781 agcttactct atccaaaccg tcgttatctc tctcctaaag tgcgaatcct aattgatttt
      841 ttcacacaac tgatgcaaga gcaaaaagag tatatttaac aaaaaagaag cagttataaa
      901 acaactgctt cctttctgaa atacgaaatt agttaattat gcttaatttt ctcaaaatga
      961 aaatcaaaag agctgcccct aatacaccaa aaaagatacc gactatatta aagtctccgg
     1021 cactataagc ggaaccaata cctaatacat caccaaatac ccagcgtcca agtgacgaac
     1081 ccaaaatacc aataataata tttttgcaaa gtccgccttc acttttcatt acagccgaag
     1141 ctatccaacc aattatagcg ccaacaataa ttgcagcaat ccatcccata atattctcct
     1201 tagctgagtt gaaatgaatt tttactctac aagattatga caaataaaac aaatttttat
     1261 tttttacact aaaaagtttg tttagcttct ttgattaata cctctggtat agtaatgccc
     1321 aattcttttg ccgttttagt attaattgaa agctctaatt tgctgacttc ttggattgga
     1381 attgtacctg ctttttcccc ttttaataca cgagcagcaa ctttaccggt tgccacacca
     1441 atatcatatt gattaaccgc ataagctgcc actgcaccac gttgtactgt atcacggtca
     1501 gcagcaatca ccggaatttt tgcttctaaa gccgctttat gtaaggcttc ataagccgaa
     1561 acaactgcat tatcttcaga aatataaata gcctgcactt ttccgtttag gctgcgagca
     1621 gcagtgccaa tatcggcact gcgttgaaca gcaaccggca ctatagtaaa gccctgtttt
     1681 tgagcctctt gttttaactc ttctaacaca atcgcagaat taacttcacc tgcactatac
     1741 acataaccaa cagctttcaa atccggtact aatgtttgaa ttaatttcac ttgtggagcc
     1801 atcgctttgt ggtctgaaat ccccgtcacg ttagtgccac ttggctccca cgattttact
     1861 aattttgcag caaccgggtc tgtcacgcct gaaaacacaa ttgggataga acgtgttgca
     1921 gcaacaacag gttgtgccga aggtgtggtg atcgggataa taatatctgc tttatcccca
     1981 acaaatttac gcgcaatttg tgctgctgtt gcagtactac cctgtgcaga ctgatagtcg
     2041 attttaatgt ttttaccatc aacaaaccct tctcgggcta attcttcaat cacaccttta
     2101 cgaattgaat ctaatgcagg gtgttccaca atcgctgtaa ttgctacatt ttgaatttta
     2161 tcttgagcta atgccgctac agaaagtgaa cttaacaaag tcactaataa ggttttatgg
     2221 aatttcattt tctctcctta agatcattac tgtactatca caacagtaca aacacaaaac
     2281 aaagataagc aatttttagt cggagtgcaa gtggaatttg attatttccg tcacaaaaca
     2341 aacaagcggt taaattttga ctgatatttg caaataatca gaaaaattta accgcttgta
     2401 atgtgttttg atgaaataga tctcttattt caccaacttt aaggtagatg ttttcttcgc
     2461 cttgattttt ttaggctgct ctactgctct aactcgagct tgataagcct cttcagtgta
     2521 gtaggcttct tcttggaaca taataccatc accggtttct tgcgcataaa tcgccaccat
     2581 tgccccaaaa ggaatataaa tatctcttaa cattccctga aaacgagcgc taaagctaat
     2641 gtattcatca gccacaatat actgcccgat ggaacgaggc gaaatattta aaataatctt
     2701 cccttctttg acaaactcta ccggcacatc tacgtctgga aattctgcat tcactaataa
     2761 gtaaggcgtg ttatcgctat caataatcca gttatagtag gcattataaa gataaggtct
     2821 taatggtttc attagtcttt atcgtccatt aaatgttttg gcgcttcgcc gccaacagac
     2881 tggataaaac tatcacgttg gaatacacgg gtcatatacg cattaattgg ttttgccgtt
     2941 gcaccgctga atttaacgcc taagatttgc atacgccata ataacggtgc aatatagcaa
     3001 tcaaccaagc tgaaatcatc gctcataaaa taaggtttag cggcaaaaat aggcgctaat
     3061 gccaatacat cttctttaag ctgtgctaac gctttcttgc cttccgctga ttcaggatct
     3121 ttattcacaa tatcaatttg cgaataccaa tcttgttcaa tacgatacat atttaaacgg
     3181 cactgaccac gagaaacagg gtaaaccggc attaatggtg ggtgagggaa acgctcatct
     3241 aaatattcca taataatacg agggttaaac agcactaatt cacgatcaac caatgtagga
     3301 atattaccgt aaggattcaa ttctaataaa tcttcagaaa tactgcctag cataacgttc
     3361 tctatttcat aaggcacccc tttttctgct aacacaatac gcacttggtg gctgtaaata
     3421 tcatttttat ccgaaaaaag agtcattacc gaacgtttgt ttatactact cgtcatttat
     3481 atctccgatg attaaattta taaaaaataa aatggttgtc gattatatca tattttaacc
     3541 agcagataac agccctaaaa attgcttttc acttcttaaa tagctacgca aacgtttgct
     3601 ttgtatgcta tgattacact gttttacatt agtatcataa ggatttaaaa tgccaaataa
     3661 agctgaaatt gcgatcgtaa tgggatctaa gagtgattgg gctacaatgt ctgaagcaac
     3721 ccaaatatta gaccagttcg gtttgagcta tcacgttgaa gtcgtctcag cacaccgcac
     3781 accggacaaa ctcttttctt ttgctgaaac tgcagagact aacggctata aagtgattat
     3841 tgccggagcc ggcggtgcag ctcacttgcc cggaatgatc gctgctaaaa ccattgtgcc
     3901 ggtgttaggt gtgccggtaa aaagctcaat gttaagtggt gtagatagcc tctattcgat
     3961 tgtgcaaatg ccgaaaggta ttccggtcgg tacgctcgca atcgggccgg caggtgcagc
     4021 aaatgcaggc ttattagccg ctcaaatttt agcagccttt aaccctgata ttgcagagaa
     4081 actgcgtatt ttccgtcaaa cccaaactca gatggtatta gataatcctg atcctcgtgt
     4141 tgaataacta ttgtataaaa gatgtctaaa aaattattaa tcctccacac tggtggtact
     4201 atttcaatga aagaagggga agacggtaag gtctcccctt ccaatgaaaa tcctctcttg
     4261 gctgccttag aacgtttaaa ccacccagca aaattggcgc aagaatcgtt atttaatatt
     4321 ccctctccgc atatcaatat cgagcattgg caacagttaa aaatgcggat tgaaaaggca
     4381 gtgaatgagg agaatgtcga tggcgtagta atcacccacg gcacagatac cttggaagaa
     4441 acctcctatt ttctggattt agccctcagc gtaaatatac cggtagtaat taccggagca
     4501 atgcgttcca gtaacgaact gggtgctgat ggcttaatca atctacaaag tgcgatttta
     4561 gtggcgttaa atgaagaaag ccgagataaa ggcgtgttag tggtgatgaa tgatgaaatc
     4621 cacaatgcta aatttgtgac caaaacccac accactaatg tggcgacttt ccaaacccca
     4681 acctttgggc cttgtggctt agtaacgaaa gaatctgtca tttttttcca aaaattgacc
     4741 acttacgaac gttatccaat tcaacaagta actaaagcta acgtgcaact actgaaagca
     4801 tacgccggaa tggatagttt tctgctggaa caattagcga aaagcaaatg cgatggtgtt
     4861 gtgattgagg cattgggtgc aggtaattta ccccctagtt gtctggctgg tattgaggct
     4921 ttagtgaatg ccaatattcc aattgtaatt gtttctcggg cattcaatgg tattacccaa
     4981 gatgtctatg attatgtagg cggtggaaaa cagttaaagc aaaaaggcat tatttttacc
     5041 aaaggcttaa gtgggcaaaa agctcgcatt aaacttatgg tcttactcag ccaaacctta
     5101 gacaaaccac tatcagacta tttctaaccc attgagaata ccacgatgca aaaaagtgca
     5161 atctacccac ctgtgtatgt attaggcaac ggccagctcg ggagaatgct acgctacgcc
     5221 ggagcaccac ttgatattga agtcaaaccg ctggctttcg atgcccctgt gtttgatatt
     5281 gagccaaaca gcattattac cgcagaaatc gaacgttggg cagatacgcc tttaacgcaa
     5341 ttactcggta accacccgaa ttttgtgaac ctgaatgttt ttgggaagtt agccgatcgt
     5401 tttacgcaaa aatcactact tgatgaactc catcttgcga cttcaaaatg gcaactgcta
     5461 gaaaatgccg aacattggca agatattttt cagcatattg gcgaaaaagt agtggttaaa
     5521 cgccgaaccg gaggatatga cggacgtggg caatggattg taacgcaaga ctcgattcat
     5581 caaattacac ctgaattatt tggcgaagtg attgccgaaa aatttatccc gtttgagggg
     5641 gaaatttcca ttgttggggc gagattccgt gacggctcaa cccgtttcta ccctatttct
     5701 cacaatttac aacaaaacgg cattctacgt tactccgtct ccgatgtgaa tttaccgaac
     5761 caagccctct accagcagca agccgaacag atgctcgcta cggtaatgca aaaattagag
     5821 tatgtcggcg taatggcaat ggaatgcttt gttgtgggcg acaagctact catcaacgag
     5881 cttgcccctc gagtgcataa cagcggacac tggacacaac tcggctgtgc cattagccaa
     5941 tttgagttac atttacgggc attattagat ctacctacgc cagcactcga ccaaattgcc
     6001 ccaagcgtga tggttaattt aataggcatt gaacataaca agcagtggct aagcctccca
     6061 tttagccaac tacattggta tggcaaagaa gtccgagctg gtagaaaagt tgggcatatc
     6121 aacctcactc acaccgataa aaacggctta attgaactac tggaacaact cagaccgagc
     6181 ctaacggaag atttccattc gggattagat tgggcaatca ataagctcaa gtaagcggtc
     6241 ggattttgta acttttttgc aaatctgttt acccgatggt gcgagcttcc tcgctcgtac
     6301 caaacaagcg gtcgacttag tgctaaaatt tgcaaaataa ttcaacataa tggctacttc
     6361 cggtcatcat cttgatctga aaacccctca gggtggatat ggctatcaaa aagcattttc
     6421 ttcctccgag aaaacagatt tcttcacaag aatcttagag ctgctcttta tttgtttcct
     6481 taggcaataa cttcgagcaa atgataatag agagcatagc cccaaatcct gcacctgaaa
     6541 tcttcagtga tttatcataa actgccggct caaaataaat aaatcccaaa atccaaatta
     6601 aaaagaaccc catataaatc caaaacactt tatcttcatt tttctgggta taacctttat
     6661 aaacaataac cgcactactt accatcatcg gaataataaa agtcaaaaac acattattga
     6721 acagggtacc aaatcgttca aacggattac tgtactcccg cataatatgg tgggcaatcc
     6781 agataaccac cataaaaaca agttgagaga aaataacaat tttggcaaat aagattaatt
     6841 ttgaaaataa tgaacgagaa atcatattta aacctccaac aaatacgcct ttaaatgctg
     6901 caacttatcc cttaccgcag ccgctttttc aaattccaga tctttcgcaa aatcacgcat
     6961 ttgttgttcc agcgttttaa gctctttttc cagttcttta cgggatttcg gcttgtagtc
     7021 ggttgcagaa ttttcggctt ttttgaccgc ttgtttgccc cgttttggct tgtcggattg
     7081 tccgatgtcg agcaattcac ccactttttt gttcaacgct tgtggcgtga tgccgtgttc
     7141 ttcgttgtat ttcatctgct tttcacggcg gcgttcggtc tcagtaattg ctttttgcat
     7201 tgagttggta atgcggtcgc cgtataaaat cgcttttccg ttgaggtttc gggcggcacg
     7261 tccgatggtc tgaattaacg agcgttcgga acgtaaaaat ccctctttat ccgcatcaag
     7321 aatggcaacc agcgacactt cgggcatatc taagccctca cgcaataagt tgatccccac
     7381 cagcacatca aacattccca ttcgtaaatc gtggataatt tcgacccgtt ccaccgtgtc
     7441 aatgtcgcta tgtagataac gaactcgtac gccatgttcg tccaaataat cggtgagatc
     7501 ttccgccatt tttttggtga gtgttgtcac cagcacccgt tcgtccaccg ccactcgttt
     7561 gtgaatttca gacagtaaat cgtccacctg cgtagcaacg gggcgaactt cgataatcgg
     7621 atcgagcaag ccggttggac gaactacttg atccaccaca tcgggatttt tctccaattc
     7681 atacgccccc ggtgtggcag aaacgtaaat cgtctgtggt gaaagacgtt caaactcttc
     7741 aaatctcaac gggcggttat ccagtgcaga cggcagacgg aaaccgtatt gcaccaatgt
     7801 ttcttttctc gctcggtcgc ctcgatacat tccgccaatt tgtggcacag taacgtggct
     7861 ttcatcaatc accaaaatac cgtccgccgg catataatca aacagggtcg gaggggcttc
     7921 gccctctttt ctgcccgaga gatagcgtga gtagttttca atgcccgaac agtagcccag
     7981 ctcgttcatc atctcaatat caaactgcgt acgttgggcg atccgctgct cttccagcaa
     8041 tttattctct ttgatgaaat aggtgcgacg gtcggcaagc tcgaccttaa tttgctcgat
     8101 tgcctccaaa atccgttccc gaggggtcac atagtgagtt ttcgggtaaa tggtatagcg
     8161 aggcaccttg cccaagctat gccctgtaag cggatcaaac agcgacagat tttcgatttc
     8221 atcgtcaaac agctctaccc ttaacgctac ttcatcgctt tcggcagggt aaatatcaat
     8281 cacatcgccc cgcactcgga aagtcgaacg ttggaacgcc tgatcgttgc gagtatattg
     8341 caattcggca aggcgagaga gaatttcacg ctgcccaatc atcgccccca cttgcaaatg
     8401 caacatcatc tgcatataag cgtccacatc acccaagccg taaatggcag aaacggacgc
     8461 cactacaatc gtatctcggc gttccaaaaa ggatttggtt gcggaaagtc gcatttgctc
     8521 gatctgctca ttgatagagg catctttctc gataaaggta tcgcttgccg gcacataggc
     8581 ttcgggctgg tagtaatcat agtaagagac gaaatactcc accgcatttt ccggaaagaa
     8641 cgctttcatc tcggcataaa gctgggcggc aagggtttta ttcggggcaa gcaccatcgc
     8701 cgggcgattg agcttggcaa tcacattagc aatggtaaag gttttccccg agccggttac
     8761 gccaagtaag gtttgatgtg ccaagccgtc atttaagcct tcggtcaatt tggcaatcgc
     8821 acttggttgg tcgccggagg gcttgaaagg agaatggagg ataaagggtt tgccttgctt
     8881 gctcatagaa aatcctgtct taaaaaatcg gtttatttta gcacaagcaa gcggtcgttt
     8941 ttatcgggat ttttgcaaat ttattgtaac tgcttatatt gatccattct tggatctaac
     9001 accctaacaa taaagatacc ttttgggatt ggtttataat aaatagaatg tgagcggtgg
     9061 taatgacagc gtaacaaagg gcgaataaag taacgctaaa tctcgctctg ccctaacaga
     9121 aagtttatac attacgtttt gccttgctga taatagattg aacggtttcc tcagaaacac
     9181 cgctttctaa gccttcatca attaaggctc ttagctgaat tagttgctgt tcttgtgctt
     9241 ccaatatttt taatgcggca ctgatgacct cgttggtcga accataacgc ccactttcaa
     9301 ccatttggtt cacaaattgg cttaatggct cagctaaagt tacgctggtt gttctactca
     9361 ttactattcc tatcttattg attattgagc agattgtaat ggctctaatt tagataagca
     9421 agcggtctat ttttagcaat aatttgcaaa acaaaatgtg atttacatca caaaatcagc
     9481 attatttttt gcgaataatt cgcaataagg atattatgtc gcaatatttt tattaaaagg
     9541 aaatttctat gcgtttaacc aaacttgctt ttgcactttt gcactttctg gcttttttgt
     9601 ggctactcaa gcggcagctt tagacttaac taaggaaacc gaggcttata aacaatttgt
     9661 ggtagaacag attgaccaac tggttaccga tacggaaaaa tttgtcggct acttaaacaa
     9721 aggcgatgtg caaaaagcga agaaaattta cccgcttgca agaatgtatt ttgaacgttc
     9781 tgaaccgatt gcagaaagtt ttggcgattt agaccctcgt attgatgccc gtctggcaga
     9841 tttagccgaa gaaggtaaaa ccgagaaaga ttggtcaggt ttccataaaa tcgagaaagt
     9901 attgtggcag aaaaacacca ctaaaggcac aaaagcaacg gcagaacaat tattaaaaga
     9961 tgtaaaagag ctgcgtgcga aaattcccac tgcagaagtt acccctgagc cgatgattac
    10021 cggtgcggta gatttattaa acgaagtttc tactactaaa gtaaccggtg aagaagaaat
    10081 tttctctaaa accgaccttt acgattttaa agccaatatt gaaggtgcag aaaaaatcta
    10141 tgagattttt aaaacgcaat tagagcaaat tgatgccaaa ctctcaacag aaatcggctc
    10201 tcgttttgcg gctgtcaatg cgctgttagc aaaacacaat aaatctaaaa ccggttatga
    10261 ttatgtgcct tataacaaac tgtcaaaagc ggatattaaa gcgttagcag aggctgtaaa
    10321 ccaattaggc gagccgttag ctcaacttgg cgtactttta aataaatagt ggagcaaaaa
    10381 tgatggcaga aaccacttct cgccgtgatt ttttaaaaca taccgcatta gtaggagcag
    10441 gcttattgtc tgctcctgct ttcgctttgg aatcacgaca aatatctgaa aaatctcaaa
    10501 atcaatacga cttttacggc aaacatcaag ctggtattgt tagccctgca caaaaacata
    10561 tctacttttt agtgctggat ttagacacca ctgacattgc caaagtaaaa acattgtttc
    10621 aaaactggac ggaatatagc cgtaacctca cgcttggcaa aaatgtgaaa ccttatagtg
    10681 ctaatgctta tgttccaccg gcggataccg gtgaggcaga tagcctttcg gcacagaatc
    10741 tcactcttac ttttggcgtc agtgccaatt tctttacaaa gctcggcatt gaaaaacata
    10801 agccgaaaga actgaatgat ttaccgcatt tccctcgtga tcaactacaa gcagaataca
    10861 ccggtggcga tatttgcatt caagcctgtg cagacgatcc gcaagtggct ttccacgctg
    10921 tgcgtaattt ggtgcgtgtt gcccgtggtg aaatcaaaat gaaatggtcg caaatggggt
    10981 ttaactcctt tgccaatcaa gacacacctc gtaacttatt cggttttaaa gacggcactg
    11041 ccaacgcaga aagtttaaaa gatcaggaaa atacggtatg ggtgcaacaa gagggctggc
    11101 tcaaaggcgg ttcttattta gccgttcgcc gtgttaaaat gttcttggaa acttgggatc
    11161 gcacccatct ccaatcccaa gaagaaacct tcggtcgtca ccgtgattcc ggagccggaa
    11221 tcgggcatca gcacgaattt gataaattag atttagccaa aaaagacgaa aaaggcaatg
    11281 cagtaattcc ggaagtttca cacgctcatc ttgccaataa aacggggctg aaaatcctac
    11341 gccgttcatt ctcctattca agcggtattg atgataaagg gcaatttgat tcagggttgt
    11401 tgtttgtctc tttccaacaa agtccggagc aatttatcaa aatccagaac gctctcggca
    11461 atgtggataa aatgaatgaa tacatcactc atatcggcag tggtttattt gcctgttttg
    11521 ccggtgtgaa agatgaaaat gactaccttg gcaaagcgtt gtttgattta atttagggaa
    11581 aaggaaatga aattaaaagc attagtgcta attccgttac tcttttcgag tacaggattg
    11641 cttgccaaag tgaatgtcag ccccttattt gttcagcttt ccgatgcaat ggcagagagt
    11701 aaaaaagggg aatttgcaaa atccagccaa aatttgaccg ctttacagca cgattttgag
    11761 cagattagcc agcacgattc cctcgccgga gttgaagtac agaccgctct gaaaaaagcg
    11821 attgaaacac ccaatgctga aaacttagag agcctttcta aaaactctat gcgtttgaaa
    11881 aagaacaaaa ccctagcggt tatgctgaaa aacatcagga ttttgtggca aaaatgacgc
    11941 cgctttatgc agaacttgct caaaccgtgc caactcaaga aatcgccaaa atcaaatggg
    12001 cggcttatca gtttggtaag aattgggtaa aacaggaaaa agcagtacgg gaaatcagtc
    12061 ttccccatta tggcaaattt gagcgtattc ttggtttaat gcgaattaat ctgaacgctg
    12121 aaaagccgga tatggcaaaa atcagtgaac tggtttccga actaggtgtg gtaatggcag
    12181 actttaagca agttaaagtg aaatagtaaa aaatcggggc aaattatttg ccccgataac
    12241 actaaaataa cgtccaaatc ggtttacatt cttggggtaa ttccaaactt ttaccgagct
    12301 caatccagcc agttgggtag tggaaatcag aaccgaccga gccatataaa tcaaactctt
    12361 ttgcccaacg ggcaagtaat tgccgttgat caggtgtttg tccgcagcct gatacttcaa
    12421 tgccatcgcc tccggcttgt ttgaaatctg cgattaaacg gcgaatccaa cgagcagtca
    12481 ttttatagcg tagcgggtga gcaatcgaaa tcacaccgcc tgaggtgtgg gtaacattca
    12541 ccgcgtcttc taaactactc catctcggtt tcacataggc aggtttcccc attcccagat
    12601 aacgcttaaa ggcgtgttca atattgcgga catagccttg ttcatacaaa aaacgcccat
    12661 aatgtgcccg agttacttcc cctgttgcca acgcttttgc cccctcatag gcatttgcaa
    12721 tcccgacttt tgctaatttt tcaccaattt cgaccgctct ctcttccctt aattgggctt
    12781 ggttatccaa aaacttcacc agctcctcgt tgttttcatc aatattcaac gccgcaagat
    12841 gaatactttt ttcttgccat aaaatcgaaa tttccacccc agagataagc tcaagcggtt
    12901 gattttgggc aaaatttttc gcttcttgaa tgcccgaaat cgtatcgtga tcagttaaag
    12961 ctagcattgt taccccttgc tctaccgcac gttgtaccaa ttcagtggga gaaagtacgc
    13021 catcagaggc ggtactgtgg gcgtgtaaat catatttcat tttatttatc cttaaattaa
    13081 gccggcagtc ctgaaaaatt ggcgataggc ttcggttttg ttggctaagc tgagtggata
    13141 agccctcgac gtcgaaggca ggcgatataa ataaagttct cttgtggcgg aataaggata
    13201 gaccacccat tcgttggttt tcggagcttt gtgtttttcc ggcaataaac cgagcaacgt
    13261 atcggttgcc aaaccacctg tggtaaatag ccatttcagt ttgggtaatt tgagcaacag
    13321 ttcgtccata tcgataggat caacaatttt taaatcttta tctgaagcgt ttccttttaa
    13381 acgaatcgct gtttttgccg aagaacagag cgcaacgccc ttttctcgca aaaacgcctc
    13441 aatccgaatc ggatcaaagc gtttttcttc accaactcga aaatagttag ggtcagcata
    13501 aaaaatattg cccataattc gccacatatc attttgaaaa ttcgggtaat gaaattccat
    13561 acaacgcttt tccgatgtag gtggaaaagt gccgaccatt accaccgttg cttgttcagg
    13621 taaaataggg tcaaacgggt gctgttctag cggtaaatta tccattgtca tttaatcaac
    13681 tcttttaaca tcttgagctt ttcggtttta tctaggggct gttccgctac tctgttaagc
    13741 tcgctcagca atttttcatc ttttgcaaca ttttgacgat aaatgaccgc ttgttgttgc
    13801 gaaatctgct cggcgtaagc ggtcaaattt tctaataatt ttaccttttc cgggttgtcg
    13861 tgatgttgtt ggaacaagtc gtcaatcgat tgggcgaact gcgctgcttt tgcctcaatt
    13921 tgctggttgc aatgtttctg ccatttgatc tgctcggctc gactgagtgt ttgtggatag
    13981 tgccttgctc ggtaatggaa tagtaacgcc tctactcgag ggtcttcaaa tttcaagccg
    14041 tggttggcta aatcttcagg cggtagcgtg cgtaaaatcg ccatattatt tttatccgca
    14101 ggcgagaaaa agccgtcata caaagtggtt tctacattgg tcgaaggctc aaacgtgcgt
    14161 tcttcattaa aaatttcaat cactttttcc cgaatcagcg atttctgtgc ttttaaagtt
    14221 ttcaaatttt ccaaacataa agctctgtct atgcctaaac gttctgcatt ttcaggcagt
    14281 aaggtttttg ccggtgctaa aatcgggcat ttattaatat gcactaattt taacggcaca
    14341 ggtaactcat tttcggctaa ttcatctcgt ttggtgtata aacgctgacg taaaacctct
    14401 gcattttcag tcaataagcc attcatatcg cccgataaat cacacacaat tacggcattt
    14461 tgattagttg agtgccaagc cagtggcaca acccaagcgg tatttcctcg atagttgccc
    14521 agcataccgg aaacgtgcac aagcggtgtc atttcaccag tgtcaattaa cttctctact
    14581 tcttttttac tgcgtaaatt aaagaaaaaa tcgaacaact ttggctgttt ttgcttaatt
    14641 aattttgcca ttgcgatggt ggcatacaca tcagacatcg catcgtgtgc attttcatgg
    14701 gcaatgccat tggctttggt gaggttttcc aatttaaaac ttggcatacc ggtttcatct
    14761 gttggccatt caataccatc aggtcttaac gcataacagg cacggactaa atctaacaag
    14821 tcccaacgag aatttccgtt tttccagcta tattcgtaag gatcgtaaaa attgcggaag
    14881 aaggtataac gggtcatctc atcatcataa cgaatattgt tataaccgat agtacaagta
    14941 ttcgctcggc taaattcagc gtgaattcgg gctgcaaatt ccggctcaga tacaccttca
    15001 gcgttacatt gttgcggtgt aatcccggta accatcaccg cttcggggct gggtaaataa
    15061 tccggcgttt gcttacaaaa aaacattacc ggttcaccga taatattaaa atccgcatcg
    15121 gttcgaatac cggcaaattg tgccggacga tctaacgccg gactcacgcc gaaactttca
    15181 taatcgtaaa agaaaaaaga gaatttatcg ctcattcgtt caatttgtta gaaaaaattg
    15241 ggctgattgt agcacagtaa ggcagaaagg agggaataca agcggtcaat ttccgttaga
    15301 aatttgcaaa tgctaaaat
//
LOCUS       DANLTI010000057        15285 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.057, whole genome shotgun sequence.
ACCESSION   DANLTI010000057 DANLTI010000000
VERSION     DANLTI010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15285
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.057"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            33..617
                     /locus_tag="PXB09_001389"
     CDS             33..617
                     /locus_tag="PXB09_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein HlpB"
                     /protein_id="HDL5233510.1"
                     /translation="MNKLTKISATALVALFLAACDKPAEKAPATEPTKTTEAAPTTTA
                     PAAEAAKPAETAVAAPSEAAKADYQKLVDWNTAQESTMATAQAELQKKLATQDPKQIQ
                     EGLSAFNKKVEETVKSLDAIEVSDAQIKTFKEKTKSVLTLSSEVISEQVKTISTPNDQ
                     AALQAVQQKAQSLIEAGNELQKLNVELQQRFSAK"
     gene            684..1280
                     /locus_tag="PXB09_001390"
     CDS             684..1280
                     /locus_tag="PXB09_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein Hlp"
                     /protein_id="HDL5233511.1"
                     /translation="MNTLAKISLSVLFTLFLTACEQPNSTKTQSSAESPVQVKEESKE
                     EVKPADTGAQDYKMLREWQDTQEKALNDAIKAATETLTDKQKADSTLMQETVNNALLA
                     QIDHIKISAETLNIQNNEVKALKDKTLEVLTLGAQMIVEGAKMEKNPTPEAHKAFGEL
                     QTKLNQLAEEGQQLENILRAKYDPAPAPAPAPAPAPQQ"
     gene            complement(1361..2296)
                     /gene="ftsX"
                     /locus_tag="PXB09_001391"
     CDS             complement(1361..2296)
                     /gene="ftsX"
                     /locus_tag="PXB09_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDL5233512.1"
                     /translation="MIRSFSKLGAQTNYSLRAVWQDLMQRKLGTFLTVLVIAVSLTIP
                     TVSYLLWKNTHEAATQFYPEPQLTVYLHKNLAEHDVNTVVDRIRAFETDKIESFNYIS
                     RQQSLDEFRSWSGFGEALDILDENPLPAVVTLKPKANFNNADTMVELRNGLQQIKGVQ
                     EVRLDNGWLEKLTALTWLIARIAVVCTLLMLLAVFLVIGNSVRTDVANSKAAIEVQQI
                     LGATDHFIARPFLYTGMIYGLFGSLLAVLFSAVTISYFTGVVKYVTDMFTVQFELNGL
                     DFSEAFFLVVLCVFIGWLSAKIATMRNIFRIGSRG"
     gene            complement(2306..2959)
                     /gene="ftsE"
                     /locus_tag="PXB09_001392"
     CDS             complement(2306..2959)
                     /gene="ftsE"
                     /locus_tag="PXB09_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDL5233513.1"
                     /translation="MIKFTNVNKVYKGGKPALQGIDFHLPAGGMAYITGHSGAGKSTL
                     LKLIMGIERANGGQILFNGHDITRLAHHELPFLRRQIGMVHQDYRLLTDRTILDNVAL
                     PLIILGMNQAIVEREARIALERVGLADKANYLPLHLSGGEQQRVDIARAIVHRPTLLL
                     ADEPTGNLDEKLSFEIFRLFEEFNQAGTTVLIATHDTNIISKRPKPCLVLEQGHLKF"
     gene            complement(2952..4448)
                     /gene="ftsY"
                     /locus_tag="PXB09_001393"
     CDS             complement(2952..4448)
                     /gene="ftsY"
                     /locus_tag="PXB09_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDL5233514.1"
                     /translation="MSEKKKGFWSWLGFGKKEEAEQKEIQQEQESIQPEQPVIVEPET
                     EKSFSEKLDELEDKIEEKVDQLEDYFEEKEEKIEQFAEQVEDTIEQKVEDFKEFVEEK
                     VEEAKAFFDDVEDKIEQTFEEQKGEQAVENLQNIATEQLDLNEQEQVTYQVEEAVAEE
                     VAETELVNNVQDTVEESTIQDEYQEKPSQGGFFSRLIQGLIKTKQNIGSGFRNFFRGK
                     KIDDELFEELEEQLLVADLGMPTTQKIINNLTQHATKQQLKDADLLYQQLKVELGEVL
                     KPVAQPLVLEAKKPYVILMVGVNGVGKTTTIGKLARKFQQEGKSVMLAAGDTFRAAAV
                     EQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAAAKGIDVLIADTAGRLQNKNNLMD
                     ELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAK
                     GGVIFAIADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFSHEDEQND"
     gene            4527..5117
                     /gene="rsmD"
                     /locus_tag="PXB09_001394"
     CDS             4527..5117
                     /gene="rsmD"
                     /locus_tag="PXB09_001394"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDL5233515.1"
                     /translation="MKKNRNSPQSVQQMGEVRVIAGLWRGRKLPVLNAEGLRPTTDRV
                     KETLFNWLMHDIAHSRCLDCFAGSGSLGIEALSRQAQAVVFLEKFANAANQLKKNLQA
                     LKSEQGSVIHTDTLAYLAQKNNGEPFNIVFIDPPFHQGFVPQVLNLLAENNWLAPNAI
                     LYVETEKNHPPLELPQGWQILKEKAAGMVVSRLIQL"
     gene            5201..5515
                     /locus_tag="PXB09_001395"
     CDS             5201..5515
                     /locus_tag="PXB09_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDL5233516.1"
                     /translation="MKKLTPDEAIDIAYDIFLEMAGENLDPADILLFNLQFEERGAVE
                     MVETSEDWDQEIGTLIDPDAFAEVWVGLVNEQDEMDDVFARFLISHDEENREYHVVWK
                     EK"
     gene            5528..6040
                     /gene="hpaC"
                     /locus_tag="PXB09_001396"
     CDS             5528..6040
                     /gene="hpaC"
                     /locus_tag="PXB09_001396"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HDL5233517.1"
                     /translation="MANIDTNQPIEASLKFREAMAHLSSAVSIVTTNGVAGKAGLTVS
                     SVCSVTDSPPTLLFCINKNSHVHDIIQQNGKVCVNVLSHEQEDLAKHFAAILESTMEE
                     RFGWDIWNNGFDDQPVLRSAISALQGNIVDTHAVGTHTIFVVEVSHIDVEPNHSLVYF
                     ARQFRSVNID"
     gene            6158..7030
                     /gene="tehB"
                     /locus_tag="PXB09_001397"
     CDS             6158..7030
                     /gene="tehB"
                     /locus_tag="PXB09_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HDL5233518.1"
                     /translation="MENLICYKQMPVWTKATLPQMFQEKHNTKVGTWAKLTILKGSLK
                     YYELTEEGEIIKEDIFDANHQRPMVEPQLWHKVEALSDDLECQLAFYCKPEDYFAKKY
                     NLTATHSEVLNAVNYTKGGKALDLGCGRGRNALYLNLLGFDVTAVDHNQESIDFLNYM
                     IEKEQAQNITTAVYDINEATIGSQNGEYDLIISTVVMMFLNRERIPAIIENMQKNTKV
                     GGYNLIVCAMSTDDYPCPMPFSFTFKEGELADYYQGWELVKYNEDLGHLHKTDENGNR
                     IQLRFATMLAKKIS"
     gene            7168..8205
                     /gene="purM"
                     /locus_tag="PXB09_001398"
     CDS             7168..8205
                     /gene="purM"
                     /locus_tag="PXB09_001398"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011962107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDL5233519.1"
                     /translation="MSNTQLSYKDAGVDIHAGNELVERIKPDVKRTRRPEVMGGLGGF
                     GALCALPTKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGQDLVAMCVNDLVVQGAEPL
                     FFLDYYATGKLEVDVATNVVKGIADGCVISGCALVGGETAEMPGMYHEGDYDLAGFCV
                     GVVEKSKIIDGSTVKTGDALIALASSGPHSNGYSLIRKVLEVSRSNPATDLLEDKPLS
                     EHLLAPTKIYVKSILKLVEEVDVHAIAHLTGGGFWENIPRVLPESAKAVIDESSWQWP
                     AIFSWLQEKGNISRYEMYRTFNCGVGMVIALPERDVEKALTLLKESGENAWLIGKIED
                     LGTGSEQVEIR"
     gene            8283..8561
                     /locus_tag="PXB09_001399"
     CDS             8283..8561
                     /locus_tag="PXB09_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDL5233520.1"
                     /translation="MQLFWPIYFVLMNLAALYLMYSDKQKAIKKEWRVPEITLLSFCL
                     LGGAIGVYLGMKYFRHKTQHWYFHVAVVLSTFAWLIGLPYFYLALSSY"
     gene            8704..10131
                     /gene="aspA"
                     /locus_tag="PXB09_001400"
     CDS             8704..10131
                     /gene="aspA"
                     /locus_tag="PXB09_001400"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDL5233521.1"
                     /translation="MSDVRIEHDLLGEREVPNSAYWGIHTLRAIENFNISNVTISDVP
                     EFVRGMVMVKKATALANGELGAIPKKIAKAIVAACDEVLVKGRCLDQFPSDVYQGGAG
                     TSVNMNTNEVIANLALEILGEAKGKYDIVNPMDHVNASQSTNDAYPTGFRIAVYNSIT
                     KLINKITYLQTAFENKATEFSDVLKMGRTQLQDAVPMTLGQEFKAFAVLLDEEVRNLK
                     RTAELLLEVNLGATAIGTGLNTPEGYSTLAVKYLAEVTQLPCSLSENLIEATSDCGAY
                     VMVHGALKRTAVKLSKVCNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEV
                     VNQVCFKVIGNDTTVTFAAEAGQLQLNVMEPVIGQAMFESIELLSNACINLRDKCIDG
                     ITANRDICQNYVFSSIGIVTYLNPFIGHHNGDIVGKICATTGKSVREVVLERGLLTEE
                     QLDDILSIENLMNPTYKAKRFTEEE"
     gene            complement(10206..12224)
                     /gene="rep"
                     /locus_tag="PXB09_001401"
     CDS             complement(10206..12224)
                     /gene="rep"
                     /locus_tag="PXB09_001401"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDL5233522.1"
                     /translation="MKLNSQQQQAVEYTKGACLVLAGAGSGKTRVIINKIAHLIAHCG
                     YSPKQIAAVTFTNKAAREMRERVDHSIGKENSKGLTISTFHTLGFEILKREYKLLGFK
                     SGMTLFDEQDQIALLKHLLPENVTEDKDLLKALIATISNWKNDLLSPERVLTRVRDER
                     ERVFSHFYQLYQNQLKAYNALDFDDLIMLPVLLFRQFPEAKSRWQQKIRYLLVDEYQD
                     TNTSQYELIKLIVGNEPNFTVVGDDDQSIYSWRGAKPENMQRLREDFDLQVIKLEQNY
                     RSSQRILHCANILIDNNDHLFSKRLFSELGQGEKLQVIEAKNEEHEAERIVGELIAHR
                     FSKKTKYKDYAILYRGNHQSRLLEKLLMQNRIPYKISGGTSFFARAEIKDMMAYLRLV
                     VNQDDDAAFLRIVNTPKREIGAATLEKLGILANEKQVSLFEAIFDFELIQRLTPKPYQ
                     ALQDFARWIVEIADQADRSDPIEAVKDLLAKIQYEAYLYEMAANPKVAEMQSRNVQTL
                     FEWVQAMLEGDEIEPPMNLVQVVNRLTLRDMLERGEEDDEADQVQLMTLHASKGLEFP
                     HVFLIGMEEGILPHQTSLDEDNVEEERRLAYVGITRAQQTLTFSLCKERRQYGEIIKP
                     EPSRFLLELPQDDLEWESEKPRMTEQEKEAKSSANIANLMAMLKANKK"
     gene            12472..13587
                     /gene="potA"
                     /locus_tag="PXB09_001402"
     CDS             12472..13587
                     /gene="potA"
                     /locus_tag="PXB09_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDL5233523.1"
                     /translation="MEKVEQKAIIELKNVTKSYGSKTILKNLNLTINDGEFLTILGPS
                     GCGKTTALRLIAGFEDLTEGSIILDGQDVSNVPAEQRPVNTVFQSYALFPHMTIFENV
                     AFGLRMQKVPNAEIEPRVMEALRMVRLEDRAQQKPAQLSGGQQQRIAIARAVVNKPKV
                     LLLDESLSALDYKLRKEMQNELKALQRQLGITFIFVTHDQEEALTMSDRIIVMNAGKI
                     AQDGTPREIYEEPSNLFVARFIGEINVFDATVIERVDATNVKANVEGRICNIKVEDLE
                     VQPNQKLKVLLRPEDIVIEELDENESSKAIIGHIIDRNYKGMTLESSVRLDHNGMNVL
                     VSEFFNEDDPNIDHEVGQKVALTWYEGWEVVLNDEGE"
     gene            13574..14437
                     /gene="potB"
                     /locus_tag="PXB09_001403"
     CDS             13574..14437
                     /gene="potB"
                     /locus_tag="PXB09_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDL5233524.1"
                     /translation="MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQY
                     FVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFFCLIIGYPFAFFIAKMPERIRPF
                     LLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
                     YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLL
                     PAMGMFYVADLLGGGKTPLVGNIIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRA
                     NKLLNKKVELE"
     gene            14437..15204
                     /gene="potC"
                     /locus_tag="PXB09_001404"
     CDS             14437..15204
                     /gene="potC"
                     /locus_tag="PXB09_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDL5233525.1"
                     /translation="MKKMFRNLFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWN
                     WYERLFSNDTLVQATLNSLTIAFFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVV
                     MMSPDIVMAVSMLVLFMILGIKLGFISLLIAHITFCLPYVVIAISSRLSDFDGKMLEA
                     AKDLGASEVTILRKIILPLALPSIISGWLLSFTISLDDVIVSSFVTSPSYEVLPLKIF
                     SLVKTGVTPEVNALATIMIIFSLTLVVLSQLVVKKKV"
BASE COUNT         4613 a         3181 c         2949 g         4542 t
ORIGIN      
        1 cttttatttt tatattcttg aggaattttt taatgaacaa attaacaaaa atcagtgcaa
       61 ccgctttagt cgcattattc ttagcagctt gtgataaacc agcagaaaaa gcaccggcaa
      121 cagaacctac aaaaacaact gaagctgcac caactacaac agctcctgct gcagaagcag
      181 ccaaacctgc tgaaacagct gtagccgctc caagcgaagc tgcaaaagca gattaccaaa
      241 aattagttga ttggaatacg gcacaagaaa gcacaatggc aacagcacaa gcagaactac
      301 aaaagaaatt agctacacaa gatcctaaac aaattcaaga aggattaagt gcatttaata
      361 aaaaagtaga agaaactgta aaaagcttag atgcgattga agtatctgat gcacaaatca
      421 aaacatttaa agaaaaaaca aaatcagttt taacactttc aagtgaagtg atttctgaac
      481 aagtaaaaac gatctctaca ccaaatgacc aagcagcatt acaagccgta caacaaaaag
      541 ctcagtcttt aattgaagct ggtaatgagt tacaaaaatt aaacgtagaa ttacagcaaa
      601 gattctcagc taaataattt accattcaat gaaaagctag agtattttgc tctagctttt
      661 ttttgcaatt actaaggatt actatgaaca cgctcgctaa aattagccta tctgtattat
      721 ttaccctttt tttaaccgct tgcgaacaac ctaattctac caaaacacag agctcagcag
      781 aatcgccagt tcaagtgaaa gaagagtcaa aagaagaagt taaacctgct gataccggcg
      841 ctcaagatta taaaatgtta cgggaatggc aagacactca agaaaaagcc ttaaatgatg
      901 caattaaagc ggcaacagaa acacttactg acaaacaaaa agccgattct accttaatgc
      961 aagagacagt taataacgca ttattagctc aaattgatca tattaagata agtgctgaaa
     1021 ccctgaatat tcaaaataat gaagtcaaag cactaaaaga caaaacctta gaagtcctga
     1081 ctttaggggc tcagatgatc gtagaaggtg ctaaaatgga gaaaaatcct acaccggaag
     1141 cacataaagc atttggcgag ttacaaacaa aattgaatca attagctgaa gaagggcaac
     1201 agttagaaaa tatattaaga gctaaatatg atccagctcc agctccagct ccagctccag
     1261 ctccagctcc acagcaataa tatattgctt atagtaaaaa accaagttcc taggaactgg
     1321 tttttatctg caattatttc tctaaaaaca accgcttgta ttagcctcta ctaccaatac
     1381 ggaaaatatt tcgcattgtc gcaatttttg ccgacagcca gccaataaac acacaaagca
     1441 ccactaagaa gaaggcttcg ctgaaatcta atccgttcag ttcaaattgt acggtaaaca
     1501 tatcagtcac atacttcact acaccggtga aatagctaat cgttaccgca ctaaacagca
     1561 ccgctaacag gctgccaaac aagccgtaaa tcatacctgt gtataaaaac ggacgggcaa
     1621 taaagtgatc agttgcccct aaaatttgtt ggacttcaat cgctgctttg ctattggcaa
     1681 catcggttcg cacactgttt ccaatcacta aaaaaactgc caacagcatt aataaggtac
     1741 acaccaccgc aatacgagca atcagccaag ttagagcagt taatttttcc agccagccgt
     1801 tatctaaacg aacctcctgc acccctttaa tttgttgcaa accgttgcgt agctccacca
     1861 tcgtatcagc attattaaaa tttgctttcg gttttaaggt aacgaccgca ggcaacgggt
     1921 tttcatctaa aatatctaac gcttcaccaa agcctgacca agaacgaaat tcgtctaaac
     1981 tttgttggcg agaaatatag ttaaatgact caattttatc cgtctcaaaa gcacgaatgc
     2041 gatcaacaac ggtattcaca tcgtgttctg ccaaattttt gtgcagataa acggttaatt
     2101 gtggctcagg gtaaaattgt gttgctgcct cgtgggtatt cttccaaagt aaataactca
     2161 cggttggaat cgtaagtgag accgcaatca ccagcaccgt cagaaaagtg ccgagcttgc
     2221 gttgcattaa atcttgccaa accgctctta aagagtagtt ggtttgagca cctaatttac
     2281 taaatgaacg aatcataata tttccttaaa atttaagatg cccttgctcc agcactaaac
     2341 acggctttgg acgctttgaa ataatattgg tatcgtgggt ggcaatcagc accgttgtgc
     2401 cggcttgatt aaattcctca aacaaacgga aaatttcaaa cgagagcttt tcatctaagt
     2461 ttccggttgg ctcatcggct aataacagcg ttgggcgatg aacaatggcc ctggcaatat
     2521 cgacacgttg ttgctcaccg ccggaaaggt gcaacggcag atagttcgct ttatctgcca
     2581 agccaacacg ctcaagggca atgcgggctt cacgctccac aatcgcttgg ttcattccca
     2641 aaataatcaa tggtaatgcg acattatcca aaatggttcg gtcggttaat aagcgataat
     2701 cttgatgcac catcccgatt tggcggcgta aaaacggcaa ttcatgatga gcaagtcggg
     2761 taatatcgtg tccgttaaac aaaatttgcc cgccattggc acgctcaatc cccataatta
     2821 attttaatag cgtgcttttc cccgcaccgg aatgcccggt aatatatgcc attccaccgg
     2881 caggtaggtg gaaatcaatg ccctgtaagg ctggctttcc gcccttataa accttgttca
     2941 cattagtgaa tttaatcatt ctgttcgtcc tcgtggctaa ataaggcttc aataaattct
     3001 tctgcattaa acgggcgtag atcttcaatt ttctcgccca ccccaataaa gcggatcgga
     3061 atattgaatt gatcggcaat cgcaaaaatc acgccacctt ttgccgtacc gtctaattta
     3121 gttaaggtga taccggttaa acccactgcc tcattaaaca atttcgcttg gctgatcgca
     3181 ttttgcccag tgccggcatc aagcgtaagc ataatttcgt gcggtgcggt ttcatcatat
     3241 tttttcatca cccgcacaat tttcttcaac tcgtccatca ggttattttt gttttgcaaa
     3301 cgccctgcag tatcagcgat tagcacgtca atcccttttg ccgcagcgga ttgcatcgca
     3361 tcaaaaatca ccgaggcaga atccgaaccg gtgctttgtg ccaccaccgg aatgttattt
     3421 cgctctcccc aaacctgtag ctgttcaact gccgccgctc ggaacgtgtc tcctgctgct
     3481 aacattaccg atttgccttc ttgttggaat ttacgggcaa gtttgccaat ggtagtggtt
     3541 ttccccacgc cattcacacc aaccattaaa atgacatacg gttttttcgc ttccaacact
     3601 aacggttgag ccaccggttt tagcacttca cccagttcca ctttcaactg ttgatacaac
     3661 aaatctgcat cttttaattg ttgcttggta gcatgttgcg ttaaattgtt gatgattttt
     3721 tgtgtggtcg gcatacctaa atccgccaca agcaactgct cttccagctc ttcaaataac
     3781 tcatcatcaa ttttcttgcc acggaagaaa ttacggaagc ccgaaccaat attctgcttg
     3841 gttttaatca agccttgaat taaacgactg aagaaaccgc cttgactcgg tttttcttga
     3901 tattcatctt ggatagtaga ttcttcaact gtgtcttgaa cattatttac taattcagtt
     3961 tcagcaactt cttcagccac agcctcttcg acttgataag taacttgctc ttgttcgttg
     4021 agatctaact gctcagttgc aatattttga agattttcga ccgcttgttc gcctttttgt
     4081 tcttcaaatg tttgttcgat tttatcttca acatcatcaa agaacgcttt cgcctcttca
     4141 actttttctt caacaaactc tttgaaatct tcgacttttt gttcaatggt atcttctact
     4201 tgctcagcaa attgctcaat tttttcttct ttttcctcaa aatagtcttc taactgatct
     4261 accttttctt caattttatc ttccagctca tctaattttt cagaaaacga cttctcagtt
     4321 tccggttcaa caataacagg ctgttccggt tgaatactct cttgttcttg ttgaatctct
     4381 ttctgttcag cttcttcttt cttaccaaat ccaagccaag accaaaaccc ttttttcttc
     4441 tctgacatat ttttctctca tttctcgtaa aaatagacta aacttacata gtctatcaaa
     4501 aaatccctta ttttccttta gtgagtatga aaaaaaatcg aaattccccc caatctgttc
     4561 agcaaatggg cgaagtacgg gttatcgccg gactgtggcg aggcagaaaa ttacctgtac
     4621 taaatgccga ggggcttcgc ccgacaaccg atagagtaaa agaaacgctg tttaactggt
     4681 taatgcacga cattgctcac tcacgctgtc ttgattgctt tgcaggcagt ggctctctgg
     4741 gcattgaagc cctttcccgc caagcacaag cggtcgtttt tttggaaaaa tttgcaaatg
     4801 ctgccaacca gttaaagaaa aatctccaag cattaaaatc cgaacaaggt agcgttattc
     4861 acactgacac cctcgcctat ttagcacaaa aaaataacgg tgagccattt aacatcgtat
     4921 ttatcgatcc gccttttcat caagggtttg tacctcaagt gctaaacttg ctggcagaaa
     4981 ataactggct cgccccgaat gcgattttgt atgtggaaac cgagaaaaat cacccgccat
     5041 tagagctacc gcaaggctgg caaattttaa aggaaaaagc agccggaatg gtggtaagcc
     5101 gtctgattca gctataatct ttttgttttt tataactaaa aaatataaaa taaaacttat
     5161 ctatctaaca ttttattaac actcaaatta gaataacgaa atgaaaaaat taacccctga
     5221 tgaagccatt gatattgcct acgatatttt cttagaaatg gcaggcgaaa atttagatcc
     5281 tgccgatatt ttactgttca acctccaatt tgaagagcgt ggtgcagtgg aaatggtcga
     5341 aacttctgaa gactgggatc aagaaatcgg gactttaatt gaccctgatg cctttgccga
     5401 agtttgggtt ggcttagtca atgaacaaga tgaaatggac gatgtattcg cccgtttctt
     5461 aatttcccac gatgaagaaa accgtgaata tcacgttgtt tggaaagaaa aataaaaagg
     5521 agaaaaaatg gctaatatcg acactaatca accaatagaa gcctcgctta aatttcgtga
     5581 agcaatggct cacttatctt ctgcggtgag cattgtgaca accaatggcg tagccggcaa
     5641 agcagggctg acggtttcgt ctgtttgttc cgttaccgat tccccaccaa cgctcttatt
     5701 ttgcattaat aaaaacagcc acgttcacga tattatccaa caaaacggca aagtatgcgt
     5761 taatgtgtta agccacgaac aagaagactt agcaaaacat tttgccgcca ttttagaaag
     5821 tacaatggaa gaacgctttg gttgggatat ttggaacaac ggctttgacg atcagcctgt
     5881 gttacgcagt gctatttctg ctttacaagg caatattgtt gatacgcacg cagtgggtac
     5941 gcatactatt tttgtggtag aagtgagcca tattgacgta gagccgaacc acagtttagt
     6001 ttattttgcc cgccaattta gaagcgtgaa cattgactaa aatatattta acagaaattt
     6061 gatcaaatcc gactttttta gtcggatttt ttatttcctg tttttaaaac agtgctaaaa
     6121 ttttgccgtt tatgtttgac tgacaaaagg aaacaaaatg gaaaatttaa tttgctacaa
     6181 acaaatgccg gtgtggacaa aagcaacctt accacaaatg ttccaagaaa agcacaacac
     6241 caaagtcgga acttgggcaa aactcaccat tctcaaaggt tctctcaaat attatgaatt
     6301 aaccgaagag ggagaaatta tcaaggaaga tatttttgat gcaaaccacc aacgcccaat
     6361 ggttgagcct caactttggc ataaggttga agctctttct gacgatttag aatgccagtt
     6421 ggctttctat tgcaagccgg aagattattt tgctaaaaaa tataatctga ccgctaccca
     6481 ttcagaagtg ctaaatgccg tcaattatac caaaggtggc aaagcgttag atttaggttg
     6541 cgggcgagga cgcaatgcac tttatctgaa tttactgggt tttgatgtca ctgctgttga
     6601 tcataatcaa gaaagcattg attttctcaa ctatatgatc gaaaaagaac aagctcaaaa
     6661 cattactacc gctgtttatg atattaacga ggcaactatc ggctcgcaaa acggtgaata
     6721 tgacctgatt atttccactg ttgtaatgat gttcttaaac cgtgaacgca ttcctgccat
     6781 tattgagaat atgcagaaaa acactaaagt cggcggttat aacttaatcg tatgtgcaat
     6841 gagtaccgat gactaccctt gcccgatgcc gttctccttt accttcaaag aaggcgagct
     6901 cgccgattat tatcaaggtt gggaattagt caaatataac gaagatttag gacatttaca
     6961 caaaactgat gaaaacggca accgcattca actacgtttt gcgacaatgt tggcgaaaaa
     7021 aatcagctaa acttaaccgc ttgcaggggg aattagcttc cccctaattc atcaaatcca
     7081 ttctatttat tttcactttt tcattccgca aacgtttgct tgtgctataa tggcttcgtt
     7141 ttttagtcat ttactgttga ggttaaagtg agcaacacac aactaagtta caaagatgcc
     7201 ggcgttgata ttcacgcagg aaacgagtta gtcgaacgaa tcaagcctga tgttaaacgc
     7261 acccgtcgcc ctgaagtaat gggcggatta ggtggttttg gtgctttatg tgctttaccg
     7321 acaaaatata aagagccgat tttagtttcc ggtaccgatg gcgtcggcac aaaattacgc
     7381 ttagccattg acttaaacaa acacgatact atcgggcaag atttggtagc gatgtgtgtg
     7441 aatgaccttg tcgtgcaagg tgctgaaccg cttttcttct tagattatta cgccaccggt
     7501 aaattagagg ttgatgtagc caccaatgtc gtcaaaggca ttgcagacgg ttgcgtgatt
     7561 tcaggttgtg ctttagtggg aggtgaaacg gctgaaatgc cgggaatgta ccacgaaggc
     7621 gattacgatt tagccggatt ctgtgtcggt gtggtagaaa aatctaaaat cattgacggt
     7681 tcaacggtga aaaccggtga tgccttaatt gcattagcgt ccagtggccc gcattccaac
     7741 ggctattcgt taattcgtaa agtattggaa gtcagccgat ccaatcctgc aaccgattta
     7801 ttggaagaca aacccttaag cgaacactta ttagccccaa ctaaaattta tgtaaaatca
     7861 atcctaaaat tagttgaaga agttgatgtt cacgctatcg ctcacttaac cggtggcggt
     7921 ttctgggaaa atattccacg cgtattgccg gaatctgcca aagcggtgat tgatgaatcg
     7981 agctggcaat ggccggcgat atttagctgg ttacaggaaa aaggcaatat cagccgttat
     8041 gaaatgtacc gtactttcaa ctgcggtgtc ggaatggtga tagccttacc tgagagagat
     8101 gtcgaaaaag cccttactct tcttaaagag agtggtgaaa atgcgtggct tatcggtaaa
     8161 attgaagact taggcaccgg tagcgagcaa gttgaaatcc gctaatttgc aaaataaatg
     8221 ctaaaattga ccgcttgtag taactgatct gcaaacggtt aaatttttat tgaggaatgc
     8281 aaatgcaact attttggcct atctactttg tcttaatgaa cctagctgcc ttatatttaa
     8341 tgtatagtga caaacaaaaa gcgatcaaaa aagaatggcg agtgccagaa attactctcc
     8401 tctctttttg cctcttaggt ggggctatcg gtgtttacct aggtatgaaa tactttcgcc
     8461 ataaaaccca acattggtat ttccacgtcg ctgttgtgct ttctactttt gcttggctga
     8521 ttggcttgcc ttacttttat ttagctttat catcatatta atttatcatt acttttttta
     8581 atccgaaagc ccaatttata tcctagtccg ctcacaaaaa atttgattta gatcgcatta
     8641 tttgtctatt aaaatcgtta ttatctacca aaatcgattg tcatttattt taaggagatg
     8701 aatatgtcag atgtgcgtat tgaacacgat ttacttggtg aaagagaagt acctaatagt
     8761 gcttattggg gcattcatac attaagagcg attgagaatt ttaatatctc aaatgtcacc
     8821 atttctgatg tacctgaatt tgtgcgtggc atggtaatgg taaaaaaagc tactgcgttg
     8881 gcaaatggtg aattgggtgc aatcccgaaa aaaattgcca aagctattgt ggcagcctgt
     8941 gatgaagtat tagtgaaagg acgctgtctc gatcaattcc cttcagatgt ttatcaaggt
     9001 ggagccggca catcggtgaa tatgaatacc aatgaagtga ttgccaacct tgcattagaa
     9061 attttgggcg aggcaaaagg taaatatgat attgtcaatc caatggatca cgttaatgca
     9121 agccaatcca ccaatgatgc ctatccaacc ggtttccgca tcgcggttta taacagtatc
     9181 actaaattaa tcaataaaat cacttaccta caaactgcat ttgaaaataa agccactgag
     9241 ttttccgatg tactaaaaat gggaagaacg cagttacaag atgccgtgcc aatgacgctc
     9301 ggtcaggaat ttaaagcttt tgccgtatta ttagatgaag aggttcgtaa ccttaaacgg
     9361 acggcagaat tgcttcttga agtgaattta ggcgcaaccg ctatcggtac tggtctgaat
     9421 acgccagagg gttactctac tcttgcagtt aaatatttag ccgaagtcac gcaactgcct
     9481 tgctcactgt ctgaaaatct cattgaggca acatctgact gtggtgctta tgtaatggtt
     9541 cacggtgcat taaaacgcac cgccgtcaaa ctttctaaag tgtgtaatga cttacgatta
     9601 ctttcatcag gcccacgtgc cggcttaaat gaaattaatc ttccggaatt acaagccggc
     9661 tcatctatta tgccggcaaa agtaaaccct gttgtacctg aagtcgtaaa ccaagtgtgc
     9721 tttaaagtga ttggtaacga caccaccgtt acttttgcag cagaggccgg tcaattacag
     9781 cttaacgtaa tggagccggt tatcgggcaa gcaatgtttg aatctatcga gctgctttcc
     9841 aatgcatgta ttaatctacg tgataaatgt attgacggta ttaccgctaa ccgtgacatc
     9901 tgccaaaact atgtgttcag ctctattggt attgtgacct acctcaatcc atttatcggc
     9961 caccataatg gtgatattgt cggcaaaatt tgtgcaacca ccggcaaaag tgtacgagaa
    10021 gttgtgcttg agcgaggctt actcaccgaa gaacaactcg atgatattct ctcgattgag
    10081 aacttaatga atccgactta taaagccaaa cgctttaccg aagaggaata atcattgttt
    10141 acaagcggtc tgattctggc aaaaaattgc aaatttttac caaaatcaga ccgcttgtta
    10201 tcccattatt tcttatttgc tttcagcatc gccattaaat ttgcaatatt tgcagaagat
    10261 tttgcctctt tttcctgttc ggtcattctt ggcttttcac tttcccactc caaatcatct
    10321 tgtggcaatt ccagtaaaaa ccggctcggc tcaggtttga tgatttcgcc atattggcga
    10381 cgttctttac acagtgaaaa cgtgagcgtt tgttgggctc gggtaatgcc gacataagcc
    10441 aaacgccgct cttcttctac attgtcctca tcaaggctgg tttggtgtgg cagaatcccc
    10501 tcttccatac cgattaagaa aacgtgcgga aattccaacc ctttcgaggc gtgaagagtc
    10561 attagttgaa cttgatcggc ttcatcgtcc tcttcgccac gttcgagcat atctcgcaag
    10621 gttaaacggt ttaccacttg caccaaattc atcggaggct ctatttcatc gccctctaac
    10681 atcgcttgca cccattcaaa caaggtctgc acattacggc tttgcatttc cgctactttt
    10741 gggttcgccg ccatttcata caaataggct tcatactgaa ttttcgccaa cagatctttt
    10801 actgcttcaa tcggatcgga tctatcggct tgatcggcaa tttccacaat ccagcgggca
    10861 aaatcctgta aggcttggta aggctttggc gtgaggcgtt gtatgagttc aaaatcaaaa
    10921 atcgcctcaa acaaactgac ctgcttttca ttagcaagta tgcctaattt ttctagcgtt
    10981 gccgccccaa tttcccgttt cggcgtattc acaatacgca agaaagctgc atcatcgtct
    11041 tgattcacta ccaaccgcag atacgccatc atatctttga tttccgctcg agcaaaaaat
    11101 gacgtaccac ccgaaatttt atacggaatg cggttttgca ttagcaattt ttccaacaag
    11161 cgggattgat ggttgcctcg atacaaaatt gcataatctt tgtatttggt ctttttcgag
    11221 aaacgatggg caatcagctc gcccacaatg cgttccgctt cgtgttcctc attttttgcc
    11281 tcaatgacct gtaatttttc cccttgcccc agttctgaaa acagccgctt gctaaacaag
    11341 tgatcgttat tatcaatcag aatattggca caatgcagaa tccgctggct ggaacggtaa
    11401 ttttgctcaa gtttaatcac ttgcaaatca aaatcttccc gtaaccgttg catattttca
    11461 ggcttcgccc cacgccaaga gtaaattgat tggtcatcat cgcccacgac cgtaaagttt
    11521 ggctcgttgc cgacaatcag cttaattaac tcatattggc tggtgttggt gtcttgatat
    11581 tcatcaacta acaaatagcg aattttctgt tgccaacgag attttgcttc gggaaattgg
    11641 cggaacagca acaccggcaa cataatcaaa tcatcaaaat ccaacgcatt ataagcctta
    11701 agttgattct ggtagagctg ataaaaatgt gaaaacactc gctcacgttc atcacgcaca
    11761 cgagtaagta ccctttcagg cgaaagcaaa tcgtttttcc agttagaaat agtggcaatt
    11821 aaggctttca gcagatcctt atcttccgtc acattttcag gcaataaatg tttcagcaaa
    11881 gcaatttgat cctgctcatc aaacaaggtc atacccgatt taaaaccgag caatttatat
    11941 tcgcgtttta aaatttcaaa cccaagtgtg tgaaaagtcg aaatggttaa acctttgctg
    12001 ttttctttgc cgatagaatg atccacccgt tcacgcattt cccgagcagc tttgttggta
    12061 aaggttactg ctgcaatctg cttaggcgaa tagccacaat gtgcaattaa atgtgcgatt
    12121 ttattaataa tcacccgagt cttacccgag ccggcaccag ccagcacaag gcaagcccct
    12181 ttggtatatt ctactgcttg ttgttgttga gaattgagtt tcattgaatc tattcaaaag
    12241 taattttgac aactatttta acggaaagaa aacaagcggt cgaattttca ggaaaatttg
    12301 caaaaaactt tgaaaatccg accgcttgtt catcagagaa aaatccccaa aacgcaaatt
    12361 tttcctttca atcttgcccc tttagctata tcattataag ttgatttttt aggggcaaat
    12421 gcctgatttt ataactcctt ttctttttaa tttaagggaa aaaaacagta gatggaaaaa
    12481 gtagaacaga aagctatcat tgagcttaaa aatgtaacaa aaagctacgg tagtaaaacg
    12541 attcttaaaa atttaaattt aaccattaac gatggtgaat ttttaacaat tttaggccct
    12601 tccggttgtg gtaaaacaac tgcgttacgt ttaattgccg gttttgaaga tttaactgaa
    12661 ggttcaatta ttcttgatgg gcaagatgtt tctaacgttc cggcggagca acgcccggta
    12721 aacaccgtat tccaaagcta tgcccttttc ccacatatga cgatttttga aaacgtggct
    12781 ttcgggctgc gtatgcaaaa agtgccaaat gctgaaattg agccacgtgt gatggaagca
    12841 ttacgaatgg tgcgtttaga agaccgcgct caacaaaaac cggctcagct ttccggtggt
    12901 cagcaacaac gtattgcaat tgcccgtgcg gtggtaaata aaccgaaagt attgttgtta
    12961 gacgaatcgc tttctgcgtt agattataaa ttgcgtaaag agatgcaaaa tgaattaaaa
    13021 gcattgcaac gtcaattagg cattaccttt atttttgtga cccacgatca ggaagaagcc
    13081 ttaaccatgt ctgatcgtat tatcgtaatg aacgctggta aaatcgctca agacggtaca
    13141 ccacgtgaga tttacgaaga gccaagtaac ttatttgtag ctcgtttcat cggcgaaatt
    13201 aacgtttttg atgcaactgt aattgagcgt gttgatgcaa ctaatgtaaa agcaaacgta
    13261 gaaggtcgca tttgcaatat caaagtggaa gatttagagg ttcagccgaa ccaaaaatta
    13321 aaagtattgt tacgccctga agatattgtg attgaggagt tagacgaaaa cgaaagctcg
    13381 aaagcaatta tcggtcatat tatcgaccgt aactacaaag gtatgacatt agagtctagc
    13441 gtgagattag atcataacgg tatgaatgta ttggttagcg agttcttcaa tgaagacgat
    13501 ccgaacattg accacgaagt gggacaaaaa gttgctctta cttggtatga aggctgggag
    13561 gttgtgttaa acgatgaagg cgaataacaa attccaaaat ggtgcggtcg caactatttt
    13621 cggttggtta ttacttttcg tattagtgcc gaacgtactc gttttaatca tcagcttctt
    13681 aacagaaaac cgtcaaagtc agtattttgt ggactttgca tttagttttg atgcttataa
    13741 atcactgttt aatgacacct atgcagcagt attgtggaac tcgctatata tggcgggcat
    13801 tgccaccttt ttctgtttga tcatcggcta tccctttgca ttttttattg ccaaaatgcc
    13861 ggaaagaatt cgtccgtttt tactgttttt agtagttcta ccgttttgga ctaactcact
    13921 gattcgtatt tatggcatta agattttctt aggcgtaaaa ggctttttaa atgaaagctt
    13981 gatggcttta ggtataatca gcgagccaat gcgtttatta aactcagaaa ttgcgattat
    14041 tattggttta gtttacattc tattaccttt tatgattcta ccgctttatt catcaatcga
    14101 gaaaattgat aaccgcttac tagaagctgc aaaagactta ggtgcaaacg ccttccagcg
    14161 ttttattaaa gtgactattc cattaacaat gccgggcatt gtcgcaggtt gtttattagt
    14221 attacttccg gcaatgggta tgttctatgt ggcagattta ttaggcggcg gtaaaacacc
    14281 gttagtaggt aacattatta agagcttgtt cttaaatacc aaccaatttg cattaggttc
    14341 agcagtaagt attgcattaa ctatcttaat ggcattaatg ctttatgttt actatcgtgc
    14401 aaacaaatta ttaaataaaa aggtggagct tgaataatga aaaagatgtt tagaaacctt
    14461 tttatgttgg ttgtttttgc atatctctat attccaatta tcattttagt gatcaactcc
    14521 tttaatgaag accgctttgg attaaattgg aaaggcttta cttggaattg gtatgagcgt
    14581 ttattcagta atgatacgct tgtacaagca acattgaact cattaactat tgcgttcttt
    14641 gcggcaacat tctcaaccat tttaggggca ttaacctcta ttgcgcttta ccgttaccgt
    14701 ttccgtggta aaaagctagt gggcggaatg ttattcgtgg taatgatgtc gcctgatatc
    14761 gtaatggcgg tatctatgct cgtattattt atgatcttag gtatcaagct aggctttatt
    14821 tcgctattaa ttgcacacat tactttctgt ttgccttatg tggtaattgc aatttcctca
    14881 cgcctcagcg attttgacgg caaaatgcta gaagctgcaa aagacctagg tgcaagtgaa
    14941 gtgactattt tgcgtaaaat tattttacca ctggcattac cttcgattat ttcaggctgg
    15001 ttgttaagct ttacgatttc gttagatgac gttattgttt catctttcgt gacaagccca
    15061 agctacgaag ttttaccact gaaaattttc tcattggtta aaacaggtgt aacacctgaa
    15121 gtgaatgcac tagcaactat tatgattatt ttctcattaa cattagtggt attaagccag
    15181 ttagtagtga agaaaaaagt ctaaaaatca ctaaaaatcg tatacataaa tcagcacttt
    15241 aaagagtatt aaagtgccga tttttttaca aaaataagct aaaaa
//
LOCUS       DANLTI010000058        15279 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.058, whole genome shotgun sequence.
ACCESSION   DANLTI010000058 DANLTI010000000
VERSION     DANLTI010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15279
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.058"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1122
                     /locus_tag="PXB09_001405"
     CDS             <1..1122
                     /locus_tag="PXB09_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDL5233526.1"
                     /translation="SSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQE
                     QQSQRFSGFDGSMGVGGYAGTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQL
                     PQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIANNLSSDV
                     TVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIAD
                     PSQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERS
                     DPRGVFVFRHIPFTQLDYDNQAQWREKGYAEGMDVPTVYQVNLLKPQSMFLLQRFPIQ
                     DKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY"
     gene            1194..2297
                     /locus_tag="PXB09_001406"
     CDS             1194..2297
                     /locus_tag="PXB09_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5233527.1"
                     /translation="MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFV
                     VRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYMRSRTALEQLEAEIPVKRFYSEQ
                     GDLLSKFNGLGFNDTQEAFYRYFKERLNIDVDSISGIATLRVRAFNAEEGQKINENLL
                     QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSSV
                     QLSLISTLKSELIRVETQLAQLKSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNT
                     SVATQTAEYQRLVLANELAQQQLAAAMTSLQNTRGEADRQQLYLEVIGRPSKPDWALE
                     PYRIYNIISTFFIGLILFGVLSLLLASIREHKN"
     gene            2297..3094
                     /locus_tag="PXB09_001407"
     CDS             2297..3094
                     /locus_tag="PXB09_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233528.1"
                     /translation="MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRKNIGFLWLFI
                     EPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPIAMMWRNASNRAQGAISANLSLL
                     YHRNVRVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEMPNDIFYMLCAWILMAFF
                     ALGLGLIICTLAHYIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHG
                     TEMFRHGYFGETVITYESISYLIVSDIILLFIGLLCVRSFSKGIEPR"
     gene            3091..3738
                     /locus_tag="PXB09_001408"
     CDS             3091..3738
                     /locus_tag="PXB09_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233529.1"
                     /translation="MISIRNVSKQYRTNNGWKTILKDINFELKKGEKVGILGRNGAGK
                     STLIRLMSGVEPPTTGTIERQMSISWPLAFSGAFQGSLTGMDNLRFVSRIYDADFDYV
                     KSFTEEFSELGEYLYEPVKSYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
                     CKHELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMHTFDSIDNAYNFYNKT"
     gene            complement(3816..4445)
                     /locus_tag="PXB09_001409"
     CDS             complement(3816..4445)
                     /locus_tag="PXB09_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDL5233530.1"
                     /translation="MDFSKILSQVLDTAKDAATNGLIKGNSKNDQIAKIGGGAVAIGL
                     ISMLFGRNGGSSLAKLGSLAAIGSLAYQAYQKYQAQNSSVSELSQNNFENVDENVASK
                     VILQAMIAAAASDGAITEEEKAAIVSQVGDEAEVIEWIRQEMDTPATVEEIARQVGND
                     QALATQVYLASRAVCRDLERKEIVFLANLADALGLAEALVEQLEKDAGF"
     gene            complement(4517..4990)
                     /locus_tag="PXB09_001410"
     CDS             complement(4517..4990)
                     /locus_tag="PXB09_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDL5233531.1"
                     /translation="MLEKITACPCQTGKRYAECCQPFHLKQTFASTAEQLMRSRYSAY
                     TLVNIPYIVETTVPSQQKLLDQTAMKEWAENTKWVGLSVLNHLPSLSRIHSQVEFKAF
                     FDTDEGIQGHHETSLFVQIDERWFFVDPTVPLPHQKQPCVCGSGKKFKHCCGNYL"
     gene            5439..7331
                     /gene="mnmG"
                     /locus_tag="PXB09_001411"
     CDS             5439..7331
                     /gene="mnmG"
                     /locus_tag="PXB09_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDL5233532.1"
                     /translation="MIYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQ
                     MSCNPAIGGIGKGHLVKEIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRV
                     LYRNAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLA
                     GKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQ
                     HGDEVLPVFSFMGDVSQHPRQIPCYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRY
                     CPSIEDKVMRFADRNSHQIYLEPEGLNTIEVYPNGISTSLPFDVQMGIVNSMKGLENT
                     RIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAGAQGLLAGINAA
                     LQVQGKEAWYPTRDQAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADIRLTP
                     KAHELGLIDEARWVRFNQKMEAIEQERARLKSTWAHLQMPNLDELNALLANPLAREAS
                     GEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQVEIAIKYQGYIEHQYNEIERHKRHE
                     NTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASRISGITPAAISILLVNLKKQGM
                     LKRGEL"
     gene            7426..7650
                     /locus_tag="PXB09_001412"
     CDS             7426..7650
                     /locus_tag="PXB09_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233533.1"
                     /translation="MIYLRKLGFSPFDHQMFAQPSWYFCNALVHTNYENLRQGVFVTK
                     AYLVMFLENLLFEKSHSLSNRALRINENND"
     gene            7663..8277
                     /gene="rsmG"
                     /locus_tag="PXB09_001413"
     CDS             7663..8277
                     /gene="rsmG"
                     /locus_tag="PXB09_001413"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDL5233534.1"
                     /translation="MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVR
                     NPDEMLVKHILDSLVVSRHLQGETFIDVGTGPGLPGIPLAIANPDKQFVLLDSLGKRI
                     TFIKNALRELGIKNVTPVQSRVEEYTESQFDGVLSRAFASLNDMIDWCYHLPTENGKF
                     YALKGVYDEQEIIEIKQPIQLVEVIKLEVPELVGERHLVVLKKP"
     gene            8545..9993
                     /locus_tag="PXB09_001414"
     CDS             8545..9993
                     /locus_tag="PXB09_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233535.1"
                     /translation="MNRVTNKADEFAKLSTFERIAYGSGDLAQNLVFGTVGGFLLTYL
                     TTVNGISAVAGATIFLIVKWGNVFWDPFVGAFIDKSKPSAQGKYRPYLLKFGIPLVVL
                     ASLLFLPLESVRGSVIYAFLSYFATAMVYSFVNIPYGSLSASLTRDTDEIAKLTTTRM
                     TMANIANLFVYTLFPLFVQLLAPHAELKNTGFFGIELYLGDYMSAAAGPAWFKVYAVY
                     MVIGFVALMLSYFGTKERIIPTAEETDKVKYSDLVNELKRNRPLQILGLFFLIGFTFM
                     FFGNTVWPFYLKYNIGHSEWIASVGLLGSIPGIFLVFLWPKLRRTIGKKNFFYLFLGI
                     FVLGQLCLWVWQFDSFKYSPTLGYIGRFLQQWGLTSATGFMWALVPEVVTFGEFKSKK
                     RVAGIINALMGLFFKIGLALGGIIPGYINAVYGFNGSLLAQTEEALFGINLSMIWAPI
                     ILAIIAGFVMSRYPLSDTDIDHINEKITAYSK"
     gene            10016..11062
                     /locus_tag="PXB09_001415"
     CDS             10016..11062
                     /locus_tag="PXB09_001415"
                     /inference="COORDINATES: protein motif:HMM:NF016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HDL5233536.1"
                     /translation="MQIQNPVLPGFNPDPSIVRVGDTYYIATSTFEWFPGVRIHESKD
                     LVHWNLVKNVLDTTTLLDMRGNPSSGGIWAPDLSYAEGKFWLVYTDVKITDGAFKDMT
                     NYLTTAKEIQGPWSAPIKLNGIGFDASLFHDDDGRKYLVQQTWDHREYHHPFDGITLT
                     EFDVATMKLKPETQRTIFEGTEVKLVEGPHIYKINGEYYLFAAEGGTVFTHQEVVARS
                     KTLEAHSFQLAPNTPFITNFDTPNSYLQKQGHGSLVDTPSGEWYYASLTARPWNHATE
                     SATDPRGWSTLGREAAIQKVEFDQDGWPYIVGGHGGKTFVEAPKDAIFTEAPIDHSQH
                     DEFDSSTLDINWNT"
     gene            11065..11703
                     /locus_tag="PXB09_001416"
     CDS             11065..11703
                     /locus_tag="PXB09_001416"
                     /inference="COORDINATES: protein motif:HMM:NF036826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-xylosidase"
                     /protein_id="HDL5233537.1"
                     /translation="MPFSKEMGEVGNGVLKLIGRGSLANTHDLSLIARRWQAFYFDAE
                     TKVKFTPFSYQSMAGLTNYYNHSHWSWIFITKNDQGQQVIEVAENKGGLRNGQYTSYL
                     KDKAIVIPDGTEYVWFKTKVRKETYRYEYSFDGKQWHTIPVELDAAVLSDDYVLRSYG
                     GFFTGAFVGLAAVDYSSYESTAEFSYFDYKELGDKQLTDGSFSWEKSESCFG"
     gene            11722..12702
                     /locus_tag="PXB09_001417"
     CDS             11722..12702
                     /locus_tag="PXB09_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL5233538.1"
                     /translation="MKQRRFGKTNKMVSEIGLGTWQLGTKWGEPFNHQEAMAILETAY
                     EQGINFIDTADVYNNGQSEKAIGDILKKYPDFFYVVTKCGRALNPHTAEMYTPQAIEK
                     FVDGSLSHLGTEKLDMILLHCPPTLVYRNDEIFTKLEQLKAGGKLIDYGVSIETAEEG
                     LLAMEYDIAAMEVIFNMFRLKPLEQLFPTAQQKNVGIIARVLLASGLLTGRYNACTQF
                     GKDDHRTFNRNGEAFDKGETFSGVDYQLGLQAVEELKALFGTEDLIPYALRWVLMNEA
                     VSTVIPGASKVSQVITNAAVDNFPPLTENEMQKVEDIYNRLIRPSVHHLW"
     gene            complement(12764..13765)
                     /locus_tag="PXB09_001418"
                     /pseudo
     CDS             complement(12764..13765)
                     /locus_tag="PXB09_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251403.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            13706..14716
                     /locus_tag="PXB09_001419"
                     /pseudo
     CDS             13706..14716
                     /locus_tag="PXB09_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540167.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
     gene            complement(14803..15102)
                     /locus_tag="PXB09_001420"
     CDS             complement(14803..15102)
                     /locus_tag="PXB09_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233539.1"
                     /translation="MENIKMEELKLTEKELLVLKGNALRMRFKAETNKTKNEIMQPFK
                     QVKQTGLALVNSPAVKTIALDFLVKRLLSMKGISFSVLGLTAFFLLQQKHKRDDS"
     gene            complement(15089..>15279)
                     /locus_tag="PXB09_001421"
     CDS             complement(15089..>15279)
                     /locus_tag="PXB09_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL5233540.1"
                     /translation="EQKVKVFFSIAIIMFIAVTICGMMILSALKKQRHFMQSTLTELK
                     LDIAAFKSALTLKQNGEH"
BASE COUNT         4619 a         2947 c         3148 g         4565 t
ORIGIN      
        1 tctagcctac caacgtccgg cccaagctat agcgaaatct tagcaagtaa tgaaaataca
       61 gctgaaacgc agttgcctga agtcaattta atcaagttag ataacatcac cgtacaaaac
      121 ttataccaag agcaacaatc tcaacgtttt tcaggatttg atggctcaat gggtgtgggt
      181 ggttatgctg gaacagttaa tgtaggcgat atattagaaa tatccatttg ggaagcgcca
      241 cctgccgtgc tatttggtgg aacatttagt gctgaagggc aaggtaatgg gcatttaacc
      301 caattacctc agcaaatggt gaacaaaaat ggaacggtaa ctgtgccttt tatcggtaat
      361 attaaagttg ctggaaaaac acctgaagta attcagaatc aaattgtcgg agcattgagc
      421 cgtaaagcta atcaacctca agcattagtt cgtattgcga ataacttgtc gtctgatgtt
      481 acggttatcc gccaaggaaa tagcattcgt atgccattaa gtgccaataa tgagcgtatt
      541 ttagatgcag ttgcggcagt aggtggtaca agcgaaaata ttgaagatgt aacagttcgt
      601 ttaacacgtg gaaataaagt gcgttcaatg gcgtttgaaa cattaattgc tgacccctca
      661 caaaatatta cattacgttc aggtgatgtt attgctttaa tgaatactcc ttatagcttt
      721 accggattag gagcagtagg taataatcaa caaatgcgtt tttcaagtaa aggcattacc
      781 cttgctgaag ctatcggtaa aatgggagga ttaattgatg agcgttcaga ccctcgtggt
      841 gtgttcgtat tccgccatat tccttttaca caattagatt acgataacca agctcaatgg
      901 cgtgaaaaag gttatgcaga gggaatggac gttccaactg tttatcaggt gaatttatta
      961 aaaccgcaat caatgttttt attgcagcgt ttccctattc aagataaaga tattgtatat
     1021 gtgtcgaatg ctccactgtc tgaatttcaa aaattcttga gaatgatttt ctccattact
     1081 acaccaatta caggtacagc taatacaatt agagcgtact aattagctca tagataaaat
     1141 ggtaaaaaat cattaaaaaa tgaccgcttg taacactttt cgttgaggat tttatgtcaa
     1201 agaagaaaaa acatttttta gccaaccctt tgttgtggct aactgtaatt attccaactg
     1261 cttgttctgg aatttattat tccttatttg cctctgatat ttatgtttca gaatctagct
     1321 ttgtggttcg ttcgcccaat aatcaatcga gcttaacagg cgttggtgct ttattgcaaa
     1381 actccggttt cgcccgttct caagatgata cctattcagt tcaggaatat atgcgttccc
     1441 gtaccgcatt agaacaactt gaagcagaaa ttccggtaaa gcgtttttat agtgagcaag
     1501 gtgatttact aagcaaattt aacggtttag gatttaacga tacccaagaa gcattttatc
     1561 gttattttaa agaacgtctg aatattgatg tcgattctat ttcaggtatt gcaacgctac
     1621 gcgttcgtgc ttttaatgca gaagaaggac aaaaaattaa cgagaattta ttacagcaag
     1681 gggaaacatt aattaaccgc cttaatgaaa gagcaagaca agatacggtt gagtttgcag
     1741 aagagcgtgt aaaagaggcc gaaaaagacg tcaataatac tgcgttagca ttaagccaat
     1801 atcgaactaa aaataaaatt tatgatttac cggcacaatc cagcgttcag ctctcattaa
     1861 tttctacctt aaaaagtgaa ttaattcggg tagaaacaca attagcacaa ttgaagtcaa
     1921 ttacgccgga taatcctcag gtagccgcat tacaaatgcg tcaaaaaagt ttgaaaaaag
     1981 aaattgatga tcagtccaaa caacttgcag gaggtaatac ttctgtagca acgcaaactg
     2041 ctgaatatca acgtttggtt cttgctaacg aattagctca gcaacaactt gcagcagcaa
     2101 tgacttcatt acaaaataca cgaggtgaag ctgatcgcca acaactttat ttagaggtaa
     2161 ttggtaggcc aagcaaacca gattgggcat tagaacccta cagaatttat aatattatat
     2221 caactttttt tatcggctta attctatttg gagtattaag tttgttacta gcaagtatta
     2281 gagagcataa aaactaatgc gatatggtga taatacaacc tttaaacgtt cctgtgtgat
     2341 tcaaaaacgg gtgattcacg cccttttaat gagggaatta attactcgtt atgggcgtaa
     2401 aaatattggc ttcttatggc tttttatcga accattattg ttaacgttag tgattactgt
     2461 tgcttggaaa tatataaaag cagataagtt ttcaacttta aatattatcg cttttatgat
     2521 tacaggctac cctatcgcaa tgatgtggag aaatgcctct aatagagctc aaggagcaat
     2581 atcagcaaac ttaagtttgc tttaccacag aaatgtgaga gtgctagata cgatatttac
     2641 tcgagtttta ttagaagtta ctggcgcatc tatcgcccaa attctcttaa tgactatatt
     2701 tatcgctatt ggttggatag aaatgcctaa cgatattttc tatatgctct gtgcttggat
     2761 attaatggca ttttttgcct taggtttagg tttaattatc tgtactttag cacattatat
     2821 tgaacctttt ggtaagattt ggggaacatt cagcttcttt ctacttcctc tttctggtgc
     2881 attcttcttt gtccataatt taccgctaac tgctcaaaat attgccttat ggtttccaat
     2941 gattcatggt acagaaatgt ttagacatgg ttattttggt gaaacggtaa ttacctatga
     3001 gagcattagt tatcttatag taagtgatat tattcttcta tttataggac tgctttgtgt
     3061 gagaagtttt agtaaaggga tagaaccaag atgattagta ttagaaatgt aagtaagcaa
     3121 tatcgaacta ataacggttg gaaaaccata ttaaaagata taaattttga gctgaaaaaa
     3181 ggcgaaaaag tggggatttt agggcgcaat ggtgcaggaa aatcaacctt aatccgttta
     3241 atgagcggag tagaacctcc aacaacaggt acgattgaac gtcaaatgtc gatttcttgg
     3301 ccactggcat ttagtggtgc attccagggt agtttgaccg gaatggataa tcttcgtttc
     3361 gtcagccgaa tttatgatgc tgattttgac tatgtaaaat ctttcaccga agaattttca
     3421 gaactcggtg aatatttata tgaaccggta aaaagctatt cttctggtat gaaggcccgt
     3481 ttagcctttg cattatcgct ttctattgaa tttgattgtt acttaattga tgaagtgatt
     3541 gcagtaggcg atgctcgatt cgctgccaaa tgtaagcacg agctttttga aaaacggaaa
     3601 gaccgttcat tgattttagt ttctcatagc ccagcctcaa ttaaagaata ttgcgattct
     3661 gcaatggttt tagaagaggg tatcatgcat acttttgatt ctatagataa cgcttataat
     3721 ttctacaata aaacataaaa gaacaagcgg ttatatttca caagtttttc gcaaaaaact
     3781 ctcaaaatat aaccgcttgt tactaaaact gaaaattaga aacctgcgtc tttttctaat
     3841 tgttcaacta atgcctcagc taaacctaaa gcatcagcta aattagctaa gaaaacgatt
     3901 tctttgcgtt ctaaatctct gcatactgca cgggaagcta agtaaacttg tgtagccaat
     3961 gcttggtcat tacctacttg gcgggcaatc tcttcaactg tagccggagt gtccatttct
     4021 tgacgaatcc actcaatgac ttcagcctca tctccaactt gggaaacaat agctgctttt
     4081 tcctcttcag taatagcacc atctgaagca gcagcggcaa tcattgcttg taaaatcact
     4141 ttacttgcca cattttcatc tacattttca aaattatttt ggctaagttc tgaaaccgat
     4201 gaattttgcg cttgatactt ttggtatgct tgataagcaa ggctaccgat agcggctaaa
     4261 gagcctaatt ttgctaaact tgaaccgcca ttacgcccaa ataacattga aattaaacca
     4321 atagcgacag cgccgccacc aattttagcg atttgatcgt ttttagaatt acctttaatt
     4381 aatccgtttg tagcggcatc ttttgctgta tctaatactt gacttaaaat cttactgaaa
     4441 tccatttttg ttcctcttgg taagtaaatg aaatttactc attagtcctt agattcaaac
     4501 aagagttcaa ttcaaattaa agataatttc cacaacagtg cttaaacttc tttccggagc
     4561 cacatacaca aggttgtttt tgatgaggca aaggtacggt aggatccaca aaaaaccatc
     4621 gctcatcaat ttgaacaaaa agagaggttt cgtggtgtcc ctgtatcccc tcatctgtat
     4681 caaaaaaggc tttaaattca acctgactat gtattctcga aagagaaggt aagtgattta
     4741 gcacggataa tcctacccat tttgtatttt cagcccactc tttcattgca gtctgatcaa
     4801 gtaatttctg ctgacttggc actgtcgttt ccacaatata gggaatatta accaaagtat
     4861 aagcactgta acgggagcgc attaattgct ctgccgttga tgcaaatgtc tgttttaaat
     4921 ggaaaggttg gcaacattca gcgtagcgtt tgcctgtttg gcaaggacaa gcggtgattt
     4981 tttctaacat ttttacattt ccgcataaaa ataaagatgt gaaaagttta cgctataaat
     5041 aaagaaaaat aaattttata aaaaagcgtg acatacccct tgtggataac ttatgcaaaa
     5101 atcgtgaatt ttttgggtat tcattgcttt aaaaagcctt tattctatag attgtggata
     5161 acttaagatt ttatccacag gttaatttat tggttaattg atagtattca cctatttaaa
     5221 ttatactaac ttattgtttt taaatgaaaa gatcttttgt tcacagaaaa attaggatct
     5281 aataagagta agaataaaga tctttatata gatctatatt atatttagtg tcgcatttag
     5341 atcttaacct ctctaaaaat ctatttccca gatgatccct ttttacgcta aaatatgcgt
     5401 tcatttttca gcagaatttg taagatagta gaagagatat gatttacaac caaatttacg
     5461 atgtgatcgt ggtcggcggt ggtcacgccg gcacagaagc ggccctagca ccggcacgaa
     5521 tgggcttaaa aaccctgatt ttaacccaca atgttgatac cttagggcaa atgtcgtgca
     5581 acccggctat cggagggatc ggcaaaggcc atctggttaa agagatcgat gcgatgggcg
     5641 gtttaatggc aaaagcaaca gacgttgccg ggatccaatt ccgtacccta aacaactcaa
     5701 aagggcctgc ggtgcgtgcc acccgtgccc aagctgaccg tgtgctttac cgtaatgcgg
     5761 tacgcactgc gttagaaaat caaccaaatt tagatatttt ccagcaagaa gtagtggata
     5821 ttttggtgga aaacaaccgt gcagtgggtg cagttaccaa aatgggctta acgtttaaag
     5881 cccgtgcggt agttttaacc gctggtacgt tcttagcggg taagatccac attgggttgg
     5941 ataactatgc aggtggtcgt gccggcgatc ctgctgcaac aatgttggca gatcgtctgc
     6001 gtgatctgaa tttgcgtgtt gatcgcctta aaacaggtac accacctcgc ctcgatgccc
     6061 gtaccatcaa ctttgacgta cttgccaaac agcacggcga tgaggtgtta cctgtcttct
     6121 cttttatggg cgatgtctca cagcacccac gccaaattcc gtgctacatc acccacacta
     6181 acgatcaaac ccacgattta attcgcaaca gtcttgatcg cagcccgatg tacaccggta
     6241 ttatcgaagg ggttggtcca cgttactgcc cgtctattga agataaagta atgcgttttg
     6301 ccgatcgtaa tagccaccag atctaccttg aaccggaagg cttaaatacg attgaggttt
     6361 acccgaacgg gatctccacc agcttgccgt ttgatgtgca aatggggatc gtcaactcaa
     6421 tgaaaggctt ggaaaacacc cgcatcatca aaccgggcta tgcgattgag tacgactact
     6481 tcgacccgcg tgatttaaaa ccaacccttg aaaccaaagc gattgacggt ttattctttg
     6541 ccggacaaat taacggcacg accggttacg aagaggcagg tgcgcaaggt ttgctggcag
     6601 ggattaacgc agcgttacag gttcaaggta aagaggcgtg gtatccaacc cgtgatcaag
     6661 cctacaccgg cgtgttggtg gacgacctct gtacattagg caccaaagag ccataccgtg
     6721 tgtttacctc tcgtgccgaa taccgtctgt tgctgcgtga agacaatgcg gacattcgtt
     6781 taacaccaaa agcccacgaa ctaggattaa ttgacgaggc acgttgggtg cgtttcaacc
     6841 aaaaaatgga agcgattgag caagaaagag ctcgtttgaa atccacttgg gcacatttgc
     6901 aaatgccaaa tctggacgaa ttgaacgcgt tattggctaa tcctttagcc cgtgaagcaa
     6961 gcggtgaaga cttaatccgc cgtcctgaaa tgagttacga aaagctgacc caaatcgccc
     7021 tatttgcccc tgctattgaa gacaagcaag tggcagaaca ggtggaaatt gcgatcaaat
     7081 atcagggcta tattgagcat caatacaacg aaatcgaacg ccataaacgc cacgaaaaca
     7141 ccctgattcc ggtagagttt gactacgaca aagtcgaaag cctctccaac gaagtgcgag
     7201 ctaaattgat gcaacaccgc cctgtctcta tcgggcaggc aagccgcatt tccggcatca
     7261 caccggcagc gatttccatt ctgttggtga atttgaagaa gcaaggaatg ttgaaacggg
     7321 gtgagctgta aatactacaa gcggttggtt ttgcagaaat ttttgcaaaa ttgaccgctt
     7381 gtattctttg gagaaggaaa tacccgaact accgccgtat ttttaatgat atatctgcgt
     7441 aaactcggtt tttcgccgtt cgatcaccaa atgtttgccc aaccttcgtg gtatttctgc
     7501 aatgcacttg ttcataccaa ttatgaaaat ctgcgacaag gtgtatttgt gactaaagcg
     7561 tatttagtga tgtttcttga aaatttattg tttgaaaaaa gtcattcgtt aagtaatcgg
     7621 gcattgcgta ttaatgaaaa taatgattaa ggaatttgca aaatgttagc taaattaaac
     7681 cgcttgcttg ctcaagccga aataaatttg accgatcaac aaaaagagca gttagttggt
     7741 tttgtgagat tattggataa atggaataag gcgtataacc tcacttccgt tcgcaaccct
     7801 gatgaaatgt tggttaaaca tattttggac agccttgttg ttagtcgtca tttacaaggc
     7861 gaaacgttta ttgatgtcgg cacggggccg gggctaccgg gcattccgct ggcgattgct
     7921 aaccctgata aacagttcgt gctactagac agcttaggca aacgcatcac ttttatcaaa
     7981 aatgcgttgc gtgagcttgg tattaaaaac gttaccccag tgcaaagtcg agtggaggaa
     8041 tacactgaaa gccagtttga cggcgtatta agccgagcct ttgcctcgct taatgatatg
     8101 atcgactggt gttatcattt accgactgaa aacggtaaat tttatgcatt aaaaggcgtg
     8161 tatgatgagc aggaaataat tgaaatcaaa caaccgattc agctagtgga agtgattaag
     8221 cttgaagtac ctgagttggt aggagaacgg catttagtag tgttgaaaaa gccctaatac
     8281 attggaagtt taatgataca agcggtcgaa tttgtaaatt tttttgcaaa tctgcctgct
     8341 tgtgttaact atttttcata aagcatacct ggttaataag gtgtgctttt tttataacct
     8401 attatttcat ctgatttatt tctattttgt gatgtgcttc acaaaaacaa aaaaacataa
     8461 tgtagtaaaa aatattcgta attgaagccc ttatttcttt acctgaaaat aagcgaactt
     8521 aattatataa cgaggaggtt cgtaatgaac agggtaacaa ataaggcaga tgagtttgct
     8581 aaactcagta cgtttgaacg tattgcttat ggtagtggcg acttagccca aaatttagtt
     8641 tttggtacag ttggtggttt cttactcact tacttaacta ctgtaaacgg catttctgcc
     8701 gtagcaggag caacgatttt cttaattgta aaatggggaa atgtgttttg ggatccgttt
     8761 gtcggtgcct ttattgacaa aagcaagccc tcagcacagg gtaaataccg cccgtattta
     8821 ctgaaatttg ggattcctct tgtggtttta gcttcactac tatttcttcc tcttgaatca
     8881 gtacgtggct cagtgattta tgctttcctt tcttattttg ccactgcgat ggtttattct
     8941 tttgttaata ttccttatgg ctcgctttct gcttctctta ctcgagacac agacgaaatt
     9001 gctaaattaa ccacaacccg tatgacaatg gcaaatatcg ctaatttgtt tgtttatacc
     9061 ttattcccac tttttgtgca gttacttgca ccacatgccg aattaaaaaa caccggcttt
     9121 ttcggtattg agctctattt aggtgattat atgtctgctg ctgcaggccc tgcttggttt
     9181 aaggtttatg cggtctatat ggtaattgga tttgtggcgt taatgctctc ttattttggt
     9241 actaaagagc ggattattcc aacagcggaa gaaacagata aagtcaagta ttcagattta
     9301 gttaatgaac tcaaacgcaa tcgtccatta cagattttag ggttattctt cttaataggt
     9361 tttactttta tgttcttcgg aaatacggtg tggccttttt acctaaaata taatattggg
     9421 cattctgagt ggattgcctc cgtcggttta ttaggctcta tccctgggat tttccttgta
     9481 ttcttatggc cgaaactacg tcgcactatc ggtaaaaaga actttttcta tctattttta
     9541 gggattttcg ttctagggca actttgtcta tgggtatggc aatttgactc cttcaaatac
     9601 tctccaacct taggctatat cggtcgtttc ttacaacaat ggggattaac ttctgctacc
     9661 ggttttatgt gggcgttagt gcctgaggtt gttacctttg gagagtttaa gtcgaaaaaa
     9721 cgtgtagcag gtattattaa tgcgttaatg ggcttgttct ttaaaatcgg cttggcgtta
     9781 ggcggtatta ttccgggtta tattaatgcg gtttatggtt ttaacggctc gcttttggct
     9841 caaaccgaag aggctttatt tggtatcaat ctttcaatga tttgggctcc aattatttta
     9901 gcgattattg caggatttgt gatgagtcgc tatccgttaa gcgatactga tattgatcat
     9961 atcaacgaaa aaattactgc ttattccaaa taatttgagt ataggagaat agattatgca
    10021 aattcaaaat ccagttttac ccggtttcaa tccagatcca tctattgtgc gtgtgggtga
    10081 tacttactac attgcaactt ctacttttga atggtttccg ggagtgagaa ttcacgaatc
    10141 gaaagattta gtgcattgga atttagttaa aaatgtctta gatacaacca cgttgttaga
    10201 tatgcgaggc aatccctctt caggtggtat ctgggctcct gatctttctt atgcggaagg
    10261 taaattttgg ttggtttata ccgatgtaaa aattacagac ggtgcattca aagatatgac
    10321 taactatcta actactgcca aagaaattca aggtccttgg tcagctccga ttaaattgaa
    10381 tggtattggg tttgatgctt cgttgtttca cgatgatgat gggcgaaaat atttagtgca
    10441 acagacttgg gatcaccgtg aatatcatca cccctttgac ggtattacgt taacggaatt
    10501 tgatgttgcc acaatgaaac tcaaacctga aacccagcgt acgatttttg aaggtacaga
    10561 agtgaaattg gtggaaggtc cacatattta taaaattaat ggcgaatatt atctgtttgc
    10621 ggcggaaggc ggcacagtat ttacgcatca agaagtagtg gctcgttcta aaacattgga
    10681 ggctcactct ttccaactgg ctccaaatac accgtttatt actaattttg atacacctaa
    10741 ttcttaccta caaaaacaag ggcacggttc attagttgat accccaagtg gtgaatggta
    10801 ttacgcttcc ctcacagcaa gaccttggaa tcatgcaaca gaatccgcaa ccgatcctcg
    10861 tggttggtca acattagggc gtgaagccgc cattcaaaaa gtagaatttg atcaagacgg
    10921 ctggccttat attgtgggtg gacacggtgg aaaaaccttt gtagaagccc caaaagatgc
    10981 aatttttacc gaagctccta ttgatcattc tcaacacgat gagtttgata gctcaacgtt
    11041 agatattaac tggaacactt aagagtgcct tttagtaaag agatgggcga agttggtaat
    11101 ggtgttttaa aattgattgg gcgaggctct cttgcaaata cacacgattt atcgctaatc
    11161 gcacgccgtt ggcaagcctt ctattttgat gcggaaacca aagtgaaatt tacaccgttt
    11221 tcttatcaat ctatggcagg tttaactaac tattacaatc actcacactg gtcttggatt
    11281 ttcatcacca aaaatgatca aggacaacag gtgattgaag ttgcagaaaa taaaggtgga
    11341 ctcagaaatg ggcaatatac ttcttacctt aaagataaag caattgtcat tcctgatgga
    11401 acggagtatg tttggtttaa gactaaagtt cggaaagaaa cttaccgtta tgaatattca
    11461 ttcgatggca aacaatggca cactattccg gttgaattag atgcggcagt gctttcagat
    11521 gattatgtgt tacgcagtta tggcggtttc ttcacaggag cttttgtcgg gctggctgca
    11581 gtggattact ccagttatga atctacagca gaatttagct actttgacta taaagagtta
    11641 ggcgataagc aacttacaga cggctcattc tcttgggaaa aatctgaaag ttgctttggc
    11701 taaaatgagg agaatatcac aatgaaacaa cgcagatttg gtaaaaccaa caaaatggtg
    11761 tcagaaattg ggttaggcac ttggcagctt gggacgaaat ggggtgaacc gttcaatcat
    11821 caagaggcga tggcaatttt agaaaccgct tatgagcaag gcatcaattt tattgatacc
    11881 gctgatgtgt ataacaacgg gcaaagcgag aaagccattg gtgatatttt gaaaaaatac
    11941 cctgactttt tctatgtcgt taccaaatgt ggacgtgcgt taaacccgca tactgctgaa
    12001 atgtacacgc cacaggcaat cgaaaaattt gttgatggta gtttaagcca tcttggcacg
    12061 gaaaagttgg atatgatttt gctccactgc ccgccaacgt tggtttatcg caatgatgag
    12121 atttttacga aattggaaca gcttaaagcc ggcggaaaat taatagacta cggtgtgagt
    12181 atcgaaacgg cagaggaagg cttgttggca atggagtatg acattgcggc aatggaagtt
    12241 atcttcaata tgttccgctt aaaaccattg gagcaactct tcccaaccgc tcagcaaaaa
    12301 aatgtgggta ttatcgcccg tgtactgttg gcaagtggtt tgcttacagg cagatataat
    12361 gcctgcaccc aatttggcaa agacgaccac cgcacattta accgcaatgg tgaagccttc
    12421 gataaaggcg aaaccttttc gggtgtggat tatcaactcg gtttacaagc ggtggaagaa
    12481 ttgaaagccc tattcggcac ggaagattta attccttacg ccctacgttg ggtattgatg
    12541 aatgaagctg tgagtacagt aatcccggga gcaagtaagg tttcacaagt aattactaac
    12601 gcagcggtgg ataatttccc tccactcact gaaaatgaaa tgcaaaaagt ggaagatatt
    12661 tacaaccgct taattcgccc aagtgtgcat catttgtggt aatttatcca acgctataaa
    12721 aaatggaact ctaacttgag ttccattttt gtcaatttta gccttaaacc tctaactgtt
    12781 tagaggtttt cttaaacaga gtcaatgcaa taaacgcaaa ggctaagaaa caggaaagga
    12841 tcagggcata gaaaccaccg tcccagccga acatatcaac cagtttaccc atcacataac
    12901 ctgcacttgc agagcctaac aagtagccga ataaaccggt taaacctgtt gctgtaccgg
    12961 tggcaacacg aggcactaaa tccgctgctt gtaaaccgat catcatcacc ggcccgtaga
    13021 ttaagaaacc aatcgccact aagcagatgt tgtcgattaa cgggttgccg gctgggtttt
    13081 tccagtacac cacaatcgca attaacacac cagcaaggaa taacaacatc ggcggcgcac
    13141 ggtgaccttt gaatactttg tcgcttaaat aaccgcttgc aagcataccg aagataccgg
    13201 catattcata caagaagtac gcccagctct gtttatccac agagaaatgt ttcacttctt
    13261 ttaagtaagt cggtgcccag tcgataatgc cgtagcgaat gaaatagaca aacacgttgg
    13321 caatcgcaat tgcccacagg aatttgttgt ttaaaatata tttgtagaaa atgtctttgg
    13381 aagagagtgt gtgggcagac tccacttttt ccaccacttt ctcgcctttg tactcatcaa
    13441 tcggcggtaa gccttgagat tccggcgtat cacgcatcaa atagaacatc acaaacgcca
    13501 gtacaatcgc aatcaacgcc ggcagataga acagggattg ccacacgcca aaaatagata
    13561 agcctaaaat cgccaacggc ccgattaaac cgccgcccaa gttgtgcgac acgttccacc
    13621 agctccacca cacgccacgt tcagaggttg agaaccagtt ggtcatcgtt ttcgcccccg
    13681 gcggatagcc cattccaaaa cgccacaagg caaaattgat ggggtgactt tctacgatga
    13741 actcaatcaa caagaacata ctgttttcgg cactgcggtg attaacgcaa ccggcgtatt
    13801 tatgaatgat attttaagta tggatcacgg tagcacgaaa aaatttgtcg taccaagcca
    13861 agggattcac ttagtattag ataaatcatt cttaccaagt aatgatgcgt taatgattcc
    13921 aaaaacctct gacggacgag tgttatttgc tgtaccttgg cacgaagtgt tagtcgtagg
    13981 gacaacagat actctgattg aaaatccttc ttatgagcca attccattgg aacaagaggt
    14041 gaactttatt ttagagacag ccgcacaata tctgacaaaa aaaccaactc gtgatgatgt
    14101 aaaagcagtc tttgccggtc aacgtccgct tgcggcaccg gaaaaagaag gtcaaagcac
    14161 taaagaagta tctcgtagtc acaaagttct cactgatgca accagcggtt tgattacgat
    14221 tacaggtggt aaatggacaa cttatcgtca aatggcagaa gataccgtag aagaagcgtt
    14281 aaaagtccac tctgaactag gcaataaacc ttgtgtgacc gtcaacttac cgattcacgg
    14341 taatattccg gcagcacaag tgaatctaca agatcatcta tatgtatatg gctcagatat
    14401 tccacagtta cgcgccttaa tgactgagac cccggaatat gcacaaaaaa tccatccgag
    14461 actagattat accgttgcag aagtgatctg ggcagttcgc cacgaaatgg cacaaacggt
    14521 tgaggatgta ttagctcgcc gtgttcgttt gctcttcact gatgcgagag cggcgattga
    14581 tagtgcagca aaagtggctg ctattatggc gaaagaatta ggtaaagatg aaatgtggca
    14641 acaacagcaa gttatccagt tccttgatgt tgcgaagcac tatttattgg tagattatca
    14701 gccacagcca atctaatacg ctaaaagcaa gcggttaaaa tcgataaaaa tattgcaatt
    14761 acgttatttg caacttttta aaccatttta accgcttgta tattagctat catctctttt
    14821 atgtttctgt tgtaataaaa agaatgctgt taaccccaat acagaaaagc taattccttt
    14881 catactcaat aatcttttta ccaaaaaatc taatgcaatg gttttaactg ccggtgaatt
    14941 gaccagtgca agccctgttt gtttcacttg tttaaaaggc tgcataatct catttttggt
    15001 tttattggtt tccgctttaa atcgcattct aagtgcatta ccttttagaa ctagaagttc
    15061 cttttcggtt aatttaagct cttccatttt aatgttctcc attctgtttc aaagttaaag
    15121 cactcttaaa tgcggcaata tctaatttta gctcggttaa tgtactttgc ataaaatggc
    15181 gttgtttttt caaggcagaa agtatcatca ttccgcaaat agtcacagca ataaacataa
    15241 taatggcaat agaaaagaat actttaactt tctgttcgg
//
LOCUS       DANLTI010000059        15113 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.059, whole genome shotgun sequence.
ACCESSION   DANLTI010000059 DANLTI010000000
VERSION     DANLTI010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15113
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.059"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..777
                     /locus_tag="PXB09_001422"
     CDS             <1..777
                     /locus_tag="PXB09_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5233541.1"
                     /translation="LSKVSDEGTTENPVFPKISESEFNHDGSQFGSWPNWENVRQIEK
                     GMNKDQLYNLIGRPHFEEGLYGVREWDYAFNYRENGVHKICQFKILFDKNMNAQSFFW
                     YPNGCNGNSSFALTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRL
                     GSAAYNLDLSQRRSNTVKARLVQQGVTAQIEAVGYGKANQVKACDGETGQALKDCLRP
                     NRRVEISANCGVMKQNEGGNVAGPNGPAPLYQTPAYDGSK"
     gene            865..1683
                     /locus_tag="PXB09_001423"
     CDS             865..1683
                     /locus_tag="PXB09_001423"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HDL5233542.1"
                     /translation="MNYQAIAFDLDGTLLSSNATILESSKEAIKKVREKGIKVYFVTG
                     RHHTAVRPYYVELGLDTPVVCCNGTYVYDFKNEKVLSGNPLSAEIASKLVNDAQAQGI
                     HTAVYFEDAMTYESLNIHFTKFQKWVESCAPEVRPNVYQVENFQQEIDKGVTVWKVLI
                     SDPDLAKMQKFVEKLPPDQVSPEWSWVDRVDITSVGNSKGARLAEVLKTEGIDLQKVI
                     AFGDNFNDVSMLETVGLGIAMGNSEPDIQQKAKKTIGSNNEDSIANELKAQFNL"
     gene            1686..3377
                     /gene="narQ"
                     /locus_tag="PXB09_001424"
     CDS             1686..3377
                     /gene="narQ"
                     /locus_tag="PXB09_001424"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDL5233543.1"
                     /translation="MIKAKYSIARRIGLYFLIMIGFASIISGISLGIMWSNKSDASLI
                     NVSGSLRMQSYRLLSEMDSKKALLPERLLEYHRTLHATELSSLKQSVLLPDSVIESYQ
                     QLLKDWYEMQSYVAQGDKVNYASHIEDYVQRVDDFVFRLQEFAELKLKIATGVIAIAM
                     LLIIALAYIGVWYTRKKIIGPLRQLVKASWQIQNKDFDHVKLAVNEPNELGLLSSTFT
                     EMSNELLKLYTSLEDKVQDKTRRLLAVNRSLLVLYQCSQLLTAKPINKEVLNQVLKTV
                     FDNEHLLGIDLQVYGAEYWNVSIDNKPSLDWVSAEIAIENEKLGILSWKPSLVCPGER
                     LIQNVSEMIGRSLYVVQMQKQQQQLVLMEERAIIARELHDSLAQSLTFFKIQVSLLKL
                     AKTDEKRNEILTVFEKALNDAYSQLRELLTTFRLTIQEANLQQALEKILESLRPKTSA
                     QIRLSCKLPSHMFNAQQQVHVLQIVREAVINAIKHSQATEINVIAETNDDGEHCLTIQ
                     DNGVGLAAHTQPEGHYGLTIMQERAAELKAEFSIENVESGGVKVQVLLPSMISKR"
     gene            3428..3946
                     /locus_tag="PXB09_001425"
     CDS             3428..3946
                     /locus_tag="PXB09_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5233544.1"
                     /translation="MQFRKAVEADFETILAIYNQAIPTHQITADLELATTQNRRKWFD
                     FHLETAQYPIWVVEDEKGIAGWFSFSPFYERPAFLHTSEISIYLDRYSKGKGYGSKII
                     EFMQAEMLNHNIHTLMAYVFELNTVSQNLMRKHGFEQWGRFPNIANMGKDEKGEDKWR
                     TLLMMSYQKGIE"
     gene            3989..4588
                     /gene="rdgB"
                     /locus_tag="PXB09_001426"
     CDS             3989..4588
                     /gene="rdgB"
                     /locus_tag="PXB09_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDL5233545.1"
                     /translation="MEKTKIVLATSNADKVKEMADVLSQFGFEVVAQSEFGIESPEET
                     GLTFVENALIKARFAAKMTGLPAIADDSGLSVMALGGEPGLYSARYAGEQATDADNRQ
                     KLLAKMQGQENRLAKFVSCIVFLKHETDPTPYIASGECFGEILTEERGENGFGYDSLF
                     FYPPKACTFAELETKEKKAISHRAIALEQLKQQLAGENK"
     gene            4585..4905
                     /locus_tag="PXB09_001427"
     CDS             4585..4905
                     /locus_tag="PXB09_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDL5233546.1"
                     /translation="MIITTTPTIEGKQIVEYKGLVFGEVVSGANFIRDFLAGITDIIG
                     GRSGAYESKLNGARKEALAELAKEAQKVGANAVVGVSMEYQSMGGDKGMFIVVATGTA
                     VVIR"
     gene            4909..5361
                     /locus_tag="PXB09_001428"
     CDS             4909..5361
                     /locus_tag="PXB09_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDL5233547.1"
                     /translation="MQFEQHFEANFWQNKSLLEMNDAEWEALCDGCGKCCYRKYIQGR
                     GRRERLYYTSVACNLLDVNTGRCMNYSNRFKIESDCTKLTKKNLPDFGWLPKTCAYRL
                     LYEGKPLFDWHPLISKDPDSVKNAGMLIANGIHEKDVIDWFEFVIDEV"
     gene            complement(5402..5983)
                     /gene="lpcA"
                     /locus_tag="PXB09_001429"
     CDS             complement(5402..5983)
                     /gene="lpcA"
                     /locus_tag="PXB09_001429"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDL5233548.1"
                     /translation="MYLEQIKAELQEAADVLDKFMSDEKNIKLIQDAAMLIANSFKQG
                     GKVISCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFS
                     RYLEAVGQKGDVLFGLSTSGNSKNVLNAIKVAKEKGMKVIAMTGKDGGQMAGLADVEI
                     RVPHFRYADRIQEIHIKVIHILMMLIEFEMEKA"
     gene            6292..7251
                     /locus_tag="PXB09_001430"
     CDS             6292..7251
                     /locus_tag="PXB09_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HDL5233549.1"
                     /translation="MVVNPESFEQIIGQSVKIKEVVEQAKKFANLDAPLLIQGETGTG
                     KDLFAKSCHHFGSRRMQKFIAVNCAGLPAEEAESEMFGHRGNGVESVGFFEYAHGGTV
                     LLDSISELSLEMQAKLLRFLNDGSFRRVGEDQEIQVNVRVICTSLQPLSLLVEKGKVR
                     EDLFHRLNVLTLNLPPLRDRKEDIPLLADYFIAQISNQLGVSKLEYDNVFLQALQNYH
                     WRGNLRELYNALYRACTLSHSYRLAVKDLHLPRDMEAMIEVREEATLEEMMSQYEAQL
                     LHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTKNGNSKDE"
     gene            7244..8995
                     /locus_tag="PXB09_001431"
     CDS             7244..8995
                     /locus_tag="PXB09_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233550.1"
                     /translation="MNKLAVIFSVCFANLGLNSTAYAAPSIPQELLENSLVYCTTSSG
                     FSFNPQKSDVSSNMNVVTEQIYDKLVEFNPKKNRLEPALAESYSISDDGLVITLRLRK
                     NVAFHTTPWFTPSRKLNAEDVVFSLKRMIGKESDLPEVKSEPESVLHHQRQSYIYQKT
                     AGQIYFPYFESVDLANKIASIHSPSNDIVKIELVRPDSALLAHLASQYAVILSKEYAL
                     QLNADDNLVQLDLLPVGTGVYQLESYENNDYVRLKPNMNYWGKKAYIQNMVVDFSTEA
                     TGRMAKFLNNECDVVAFPEPSQLSVLNNRQLISSKGANLVYLAFNMQRGIGQDLALRQ
                     RIARGINRKRIAEKLFYGTGEVADNLLPTALWSKKNNGSYPYQPHQNSGEQAVEMHDS
                     IINRSLDSKTETEEVNQKQRLKLWVIDEKRVYNQHPLKMAEMIRADLATQNLEVEIRA
                     VSRAYLVQQLANKSADYDLILGGWLANNLDPNSFLEALLSCKAAETVTNLSNWCNEDF
                     DFWLQTARLSDDPASANLLYEFAQKLLEEQLPILPLMNANRVLVIKDGVKQADISPFG
                     QVKLSELRLGLGHKKGN"
     gene            8998..9963
                     /locus_tag="PXB09_001432"
     CDS             8998..9963
                     /locus_tag="PXB09_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5233551.1"
                     /translation="MLIVFFRKIFLTLITLIFLSLISFNILLRDPLNHLAELGWFEAY
                     CYYVKSLLNGDFGISFSNGEPLTAQILQVFPATITLCLSALIVSLIIGLPLGFFAATQ
                     QKNMVGRLLNTLGSLSLAVPVFWLALVLMYYASLNQWEVSAIGEIHSLYPKQMVTGFL
                     LLDIWLSDVPYKLKMMQSALHHLALPTLVLAVPATLEVMHITQARAGYVMKQNYIKIA
                     KTRGWTPFRVWRTHIICNTLPALLPMIARTFILIFAFGMLIENIFSWGGIGRWLINAL
                     AIQDYNAISAGVVAIGVFVLLVDMVTGFVRVMLDPSDKKDWYGSY"
     gene            9950..10843
                     /locus_tag="PXB09_001433"
     CDS             9950..10843
                     /locus_tag="PXB09_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5233552.1"
                     /translation="MAVIKEPEQFRETNAFKAFWFHFRQDKLALGSFYLFLLLLALIF
                     VGSLLAPYNYNEQFVGLELMPPSWDDKGQISHFLGTDDLGRDILSRIMYGFYYTLGSA
                     LMITLLIAIIGGMIGIYAGLKKGRSFWLISHLFDTFLFMPILLIAIIIATLMEASLVN
                     AMLAIFLAMLPHFIHKIYQATEKQLKKEYIITLKLDGASCWYLIREVIIPNLTGVAIK
                     ALSHIFVIAILDISALSFIMLGAKSPTPEWGAMIRESMELIYIAPWTVILPGLAIIFS
                     IFTVTILGTRLSVIFEKYRKE"
     gene            10914..11966
                     /locus_tag="PXB09_001434"
     CDS             10914..11966
                     /locus_tag="PXB09_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5233553.1"
                     /translation="MALLDIRHLSIEIDMPKGRVKMVDNINLTVDEGEICGLVGESGS
                     GKSLIAKVICGMIKDEWIVSADRFRFDDIELLKLSPAERRKLVGDHISMVFQDPLTSL
                     DPSQQIGKQLMQTIQFRGKWWQRFGWKKKKAIELLHRVGIRDHQDIMKSYPSDITEGE
                     AQKVMIAMAVANQPRLLVADEPTNIMESTTQLQVYRLLSSMNQNLGTSILLVSNDMRS
                     IQNWVDSYNVLYCGQTVEIADKESILESSYHPYTRVLLNSSPDFSQPLAFKSSLNTLR
                     GSVPMLQEMPIGCRLGPRCPFAQKKCINKPPLVKVKQHEFACHFPINFREQNLLKNKT
                     ENTPFVVAEIAEKEAF"
     gene            complement(11975..12205)
                     /locus_tag="PXB09_001435"
     CDS             complement(11975..12205)
                     /locus_tag="PXB09_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDL5233554.1"
                     /translation="MKLTACKLVFLLYLMFNLTACGTVLSLVEQDYRVYAGVIKDFQV
                     MQEGGIFAVLAVIDLPLSFVLDTLMLPVTLSQ"
     gene            12335..13417
                     /gene="leuB"
                     /locus_tag="PXB09_001436"
     CDS             12335..13417
                     /gene="leuB"
                     /locus_tag="PXB09_001436"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDL5233555.1"
                     /translation="MQTYNIAVLAGDGIGPEVMAEAIKVLEATQQKFGFKLNFNQYNI
                     GGAAIDAQGKALPENTLKGCEEADAILFGSVGGPKWTHLLPDEQPERGSLLPLRKHFS
                     LFCNLRPAALYQGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGRDGEGAQTRA
                     FDTEVYYKYEIERITRVAFESAMKRKKHVTSVDKANVLQSSILWRETVTEVAKEFPEV
                     TLEHMYIDNATMQLIKAPESFDILLCSNIFGDIISDEAAMITGSMGMLPSASLNEQGF
                     GLYEPAGGSAPDIAGKNIANPIAQILSAAMMLRYSFNLGDAADAIETAIQKALADGYR
                     TADLADDSKPLSTSEMGDIIAKNILA"
     gene            complement(13504..13899)
                     /gene="msrB"
                     /locus_tag="PXB09_001437"
     CDS             complement(13504..13899)
                     /gene="msrB"
                     /locus_tag="PXB09_001437"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDL5233556.1"
                     /translation="MIKPIHALTEQQVDILINHGTERPFTGKFLNEHRVGIYRCARCH
                     NDLFHSDTKFDAGCGWPSFYQTISESSLRYLDDYSLGRHRIEIRCGNCDSHMGHVFPD
                     GPPPTGLRFCLNSAALNFKWEETGEEIDG"
     gene            14124..>15113
                     /gene="gap"
                     /locus_tag="PXB09_001438"
     CDS             14124..>15113
                     /gene="gap"
                     /locus_tag="PXB09_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDL5233557.1"
                     /translation="MAIKIGINGFGRIGRIVFRAAQHRDDIEVVGINDLIDVDYMAYM
                     LKYDSTHGRFDGTVEVKDGQLVVNGKAIRVTAERDPANLKWNEIGVDIAVEATGLFLD
                     DETARKHITAGAKKVVLTGPSKDATPMFVNGVNFDTYAGQDIVSNASCTTNCLAPLAK
                     VIHEKFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPALNGKLTGMAFRVPTTNVSVVDLTVNLEKPATYAEICAEIKRASENEMKGVLGYTE
                     DAVVSTDFNGATETSVFDAAAGIALTDTFVKLVSWYDNEVGYSNKVLDLVAHVY"
BASE COUNT         4749 a         2592 c         3232 g         4540 t
ORIGIN      
        1 ttaagtaaag tgagtgatga aggaacaact gaaaacccgg tattcccgaa aatctcagaa
       61 tctgaattta accacgatgg ttcacaattt ggttcatggc caaactggga aaacgttcgt
      121 caaattgaaa aagggatgaa caaagatcaa ttatataatc taattggtcg tcctcatttt
      181 gaagaaggct tatatggtgt tcgtgaatgg gactatgcat tcaattaccg tgaaaatggc
      241 gtacataaaa tttgccaatt taaaatttta ttcgataaaa atatgaatgc acaaagtttc
      301 ttctggtatc caaatggatg taatggaaac tcatcatttg ctttaactgg cgatttctta
      361 ttcgatttcg ataaagcgac tttaactaca aaaggtaaag aagttgttga taatgttgct
      421 caacaattaa aagcatctaa agcacaacaa gttaaagtag caggctatac agaccgttta
      481 ggctctgctg cttataactt agacttatca cagcgtcgtt ctaatacagt taaagctcgt
      541 ttagtacaac aaggcgttac agcacaaatt gaagcggtag gttatggtaa agcgaatcaa
      601 gtaaaagctt gtgatggtga aactggtcaa gcattaaaag attgtttacg ccctaaccgt
      661 cgtgttgaaa tttctgcaaa ttgtggtgta atgaaacaaa atgaaggtgg caatgttgca
      721 ggtcctaatg gtccggctcc actttatcaa accccagcat atgatggcag taaataattt
      781 ctagttttga ctaacttaga gtagaatatt aaggcaacca aatggttgcc ttttctttta
      841 tctatttatt tataggggaa tactatgaac taccaagcta ttgcatttga tttagacgga
      901 acactacttt catcgaacgc aacaatttta gaatccagta aagaggctat taaaaaggta
      961 agagaaaagg gaattaaagt ctactttgtt accggtaggc accatactgc ggttcgccct
     1021 tattatgtag aactagggct ggatacgcca gttgtgtgtt gcaatggcac ttatgtgtat
     1081 gattttaaaa atgaaaaagt attaagcggt aatccgttat cagcagaaat tgcttcaaaa
     1141 ttagttaatg atgcacaagc tcaagggatt catactgcgg tttattttga agatgcaatg
     1201 acttatgagt ctttgaatat tcacttcact aaattccaaa aatgggttga gtcttgcgca
     1261 ccagaagttc gtccgaatgt ttatcaggta gaaaatttcc aacaagaaat tgataaaggt
     1321 gtaaccgtat ggaaagtgct tattagcgat ccagatcttg ccaaaatgca aaaatttgtt
     1381 gaaaaattac cgcctgatca agtaagcccg gaatggtctt gggttgatag ggttgatatt
     1441 accagtgttg gtaacagcaa aggggcaaga ttagcggaag tattaaaaac agaaggtatt
     1501 gatttacaaa aggtgattgc ctttggcgat aatttcaatg atgtttctat gctagaaacc
     1561 gttggattag gcattgcaat gggaaattca gaaccagata ttcagcaaaa agcgaagaaa
     1621 actataggtt caaataatga agatagtatt gctaatgaat tgaaagctca atttaatctt
     1681 taattatgat aaaagcaaaa tactctattg ctaggcggat aggactctat tttttaatta
     1741 tgatcggatt tgcttcgatt atcagtggaa tctcacttgg tattatgtgg agcaataaat
     1801 ctgatgcgag cctgattaat gtttcaggct cacttcgtat gcaaagttat cgattgttat
     1861 cagaaatgga ttcaaaaaaa gcgctgctac ctgagcgatt gttggaatat catcgaacgc
     1921 tacatgctac agagcttagt tcattaaagc aaagtgtttt attgccagat agcgtgatag
     1981 aaagctatca acaattactt aaagattggt atgaaatgca atcttatgtc gctcagggag
     2041 ataaagttaa ttatgcttcg cacattgaag attatgtgca gagagttgat gattttgttt
     2101 tccgcttaca agagttcgct gagttaaaat taaagattgc aacaggcgtg attgcgattg
     2161 caatgttact gattattgcc cttgcttata ttggcgtttg gtatactcga aaaaagatta
     2221 ttggaccttt aaggcaattg gtaaaagcga gttggcaaat tcaaaataaa gattttgacc
     2281 acgtaaaatt agcggttaat gaacccaatg aattagggct actttcctct acttttactg
     2341 agatgtctaa tgaattatta aaattatata cttcattaga agataaagtt caggataaaa
     2401 cacgtcgttt attggcggta aatcgttctt tactggtatt atatcaatgc tctcaattat
     2461 taactgctaa gccgattaat aaagaagtgt taaatcaagt acttaaaacg gtatttgata
     2521 atgaacattt gctagggatt gatttacaag tatatggggc tgaatattgg aatgtatcaa
     2581 tagacaataa accaagttta gattgggttt ctgctgaaat tgcaatagaa aatgaaaaat
     2641 tgggtatctt aagctggaaa ccctcactgg tttgtcctgg tgaacgattg atccaaaatg
     2701 tgtcggaaat gattggtcgt agcctttatg tagtgcagat gcaaaagcaa cagcaacaat
     2761 tggtactcat ggaggagcgt gcaattattg ctcgtgagtt acacgattcc ttagcccaat
     2821 ctcttacgtt tttcaaaatt caggttagcc tgcttaagct tgctaaaaca gatgaaaagc
     2881 gtaatgaaat tttaactgta tttgaaaaag cgttaaatga tgcttacagc caattaaggg
     2941 agctgttgac gacgtttagg ctaacgattc aagaagcgaa tttacaacaa gcgttagaaa
     3001 aaattttaga aagcttaaga ccgaaaacct cagcacagat tcgcttaagt tgcaaattac
     3061 cttcgcatat gtttaatgct cagcagcaag ttcacgtatt gcaaattgta cgagaagctg
     3121 tgattaatgc tattaagcat tcgcaagcca ctgaaattaa tgtgattgct gaaacaaatg
     3181 atgatggtga acattgtttg actattcaag ataatggcgt agggcttgct gcccatacgc
     3241 aaccagaagg gcattatgga ctgacgatta tgcaagaacg ggcggctgaa ctcaaagccg
     3301 aattttcgat tgaaaatgtg gaaagtggcg gagtaaaagt acaggtttta ttgccgagta
     3361 tgattagcaa gcggtaataa aatattaatt ttttgcgtat tattggcaac gaataaaagg
     3421 ataacaaatg caattccgaa aagcagtaga agcggatttt gagacaatat tggcaattta
     3481 taatcaagca attcccactc accaaattac cgccgattta gaactggcaa ctacgcaaaa
     3541 tcggcggaag tggttcgatt ttcaccttga aacagcccaa tatcctattt gggtggtcga
     3601 agatgaaaaa ggcattgctg gctggtttag tttttcacca ttttatgaaa gaccggcatt
     3661 tttacatact tcggaaatca gtatctattt agaccgctat tccaaaggaa aaggctatgg
     3721 ctcaaaaatt attgagttta tgcaagctga aatgcttaat cacaatattc atacgttgat
     3781 ggcgtatgtg tttgaattaa atacagtgag ccaaaatcta atgagaaaac acggctttga
     3841 acaatgggga agatttccga atattgctaa tatgggaaaa gatgagaaag gtgaggataa
     3901 atggcgaacg ttgctgatga tgtcttacca aaaaggtatc gaataacaag cggtgatttt
     3961 ttagaatatt tttgcaaata aggacaatat ggaaaagaca aaaattgtac ttgcaacaag
     4021 taatgcagat aaagttaaag aaatggcaga tgtactctca caatttggtt ttgaggtggt
     4081 ggctcaaagt gaatttggga ttgaatcacc ggaagaaacc ggtttgactt ttgttgaaaa
     4141 tgcgctgatt aaagcacgat ttgctgctaa aatgacaggt ttaccggcga ttgccgatga
     4201 ttcaggttta tcggttatgg cacttggtgg tgaaccgggg ctatattctg cacgttatgc
     4261 cggagagcag gcaaccgatg ccgataatcg ccaaaaatta ctagccaaaa tgcaagggca
     4321 agagaatcgt ctggcgaaat ttgtcagttg tatcgtgttt ttaaaacacg aaactgaccc
     4381 aacaccttat attgcgtcgg gtgaatgttt cggtgaaatt ttgacggaag aaagaggtga
     4441 aaatggtttc ggctacgatt ccctgttttt ctacccaccg aaagcttgca cttttgccga
     4501 attagaaacc aaagagaaaa aagcgatttc acaccgtgca atcgcactag agcaattaaa
     4561 acagcaatta gcaggagaga ataaatgatt attacaacta cacctacgat agagggtaaa
     4621 caaattgtag aatacaaagg gttagtattt ggcgaagtag tttctggggc taattttatc
     4681 cgtgatttct tagccggtat caccgatatt attggcggac gttcaggtgc ttatgaaagc
     4741 aaattaaacg gtgcaagaaa agaggcatta gctgaattag ctaaggaggc acaaaaagtg
     4801 ggggcaaatg cggtggttgg cgtttctatg gagtatcaat caatgggcgg cgataaagga
     4861 atgttcatcg tggtagcgac tggtactgcg gttgtaatac gttaatttat gcagtttgaa
     4921 caacactttg aagcaaattt ctggcagaac aaatcgctac ttgaaatgaa tgatgctgaa
     4981 tgggaagcat tatgtgacgg ttgtggtaag tgctgctacc ggaaatatat tcagggaaga
     5041 gggcggcgtg aacggcttta ctatacctcg gttgcctgta atttattaga tgtgaataca
     5101 ggccgttgta tgaattactc gaaccgtttt aaaattgagt cggattgtac aaaattaact
     5161 aaaaagaact tacctgattt tggctggttg ccaaaaacct gtgcttatcg tttactttat
     5221 gaaggaaagc ctctttttga ttggcaccct ttaatctcta aagatcctga ttctgtaaaa
     5281 aatgccggaa tgctgattgc taacggtatt cacgaaaaag atgtgattga ttggtttgag
     5341 tttgttattg atgaagtatg agaaaaaggc gtttggtgca aacgcctttt tgttatagag
     5401 attaggcttt ttccatctca aattcaatta acatcatcaa aatatgaatc actttaatgt
     5461 gaatttcttg gatgcggtct gcgtaacgga aatgaggtac tcggatttcc acatcggcta
     5521 atcctgccat ttgcccgcca tctttgccgg tcattgcaat tactttcatg cctttttctt
     5581 tggcaacttt gatcgcattt aacacatttt tagagttacc agaggttgat agaccaaaga
     5641 gtacatcgcc tttttgccca acggcctcta gataacgaga gaagacatat tcataaccga
     5701 agtcattact tacacagctt aaatggctga catcggaaat agcgattgcc gggtatccgg
     5761 gacggttttc acggtaacga cctgttaatt cttcggcaaa gtgcatcgca tcacagtgcg
     5821 aaccgccatt accgcaagaa atcaccttac caccttgctt gaaactattt gcaatcagca
     5881 tggcggcatc ttgaattaat ttaatatttt tttcatcaga cataaatttg tctaatacat
     5941 ctgcagcttc ttgaagctca gctttaattt gttctaaata catcatttgc tcctttgttt
     6001 gcaaaacgct tacctttaaa catcggcttt accaatgggg gtagcgagta aaaaattcgt
     6061 tttttatgac cgcttgaggc ataaaaagtg caataagttt agaagatcta tgctgtattg
     6121 taaacctaat aacttaaata atctgaatag ggttgtaaac aaaagtttcc aaaagagaaa
     6181 aatagcggta tgatcgcctc acaatccctc tcgcattgtt aactctagta gctaatatca
     6241 ggctttaagc gtattaaaca atgcacaaat ttgctattta taggagacta tatggtcgta
     6301 aatccagaat cttttgaaca gataattgga caatctgtaa agataaaaga ggttgttgaa
     6361 caagcaaaaa aatttgccaa ccttgatgca ccattattga ttcaaggtga gacgggaaca
     6421 ggaaaagatt tatttgccaa atcttgtcac cattttggat ctcgtcgaat gcaaaaattt
     6481 attgccgtga actgtgccgg tttaccggct gaagaagcag aatcggaaat gttcggacat
     6541 cgtggcaatg gcgttgagtc cgtcggtttc tttgaatatg ctcacggtgg tacagtatta
     6601 ttagactcta tttctgagtt atcgctggaa atgcaagcca aattattgcg ctttttaaat
     6661 gatggctctt ttcgtcgagt gggcgaagat caagagattc aagtcaatgt tagggtgatc
     6721 tgtacttcat tacagccttt gtcattatta gttgaaaaag gcaaagtaag agaagatctg
     6781 tttcatcgtt taaatgttct cactttaaat ttaccacctt tgcgagatcg aaaagaggat
     6841 attccattat tagctgatta ctttatcgcc caaattagca atcagttggg ggtgagcaaa
     6901 ttagagtatg ataatgtttt tttgcaagca ttgcagaatt atcactggcg aggcaactta
     6961 agagagcttt ataacgcact ttatcgagct tgtacacttt cgcatagcta ccgtttagcg
     7021 gtaaaagatc ttcatttacc cagagatatg gaggcgatga ttgaagtacg tgaggaggcg
     7081 acacttgagg aaatgatgag ccagtatgaa gcccaattat tgcaccaatt ttatgcagaa
     7141 tatccgagta cccgaaaatt agcacaacgg ctcggacttt cacatactgc ggtggcaaac
     7201 aaattgcgtc aatatgggtt aacaaaaaat ggaaacagta aagatgaata aactagcggt
     7261 cattttttca gtatgttttg caaatttagg gctaaattcg accgcttacg cagcgccaag
     7321 tattcctcaa gagctacttg aaaatagcct tgtgtattgc actacttcat cgggattctc
     7381 ttttaaccca caaaaatccg atgtgagttc gaatatgaat gtggtaacag agcagatcta
     7441 cgataaatta gttgagttta atccgaaaaa aaatcgacta gagcctgctt tagctgaaag
     7501 ttattcaatc agcgacgatg gtttagtgat tacattacgt ttaagaaaaa atgtcgcttt
     7561 tcatacaact ccatggttta ctccgagtcg taaattaaac gcagaagatg tggtgttttc
     7621 gctaaaacga atgattggta aagaaagtga tttacctgaa gtgaaaagtg agcctgaaag
     7681 tgtattacac caccagcgac aaagctatat ttaccaaaaa acagcggggc agatttattt
     7741 tccttatttt gaaagtgttg atttagcgaa taaaattgcc agcattcatt ctccgtcaaa
     7801 tgacattgta aaaattgaat tagtccgtcc tgattcagca ttgttggcgc atttagccag
     7861 ccaatatgca gttattctgt ctaaagaata tgctttacag ctcaatgcag atgataactt
     7921 agttcaactg gatttattac cggtaggaac aggcgtatat caacttgaaa gttatgaaaa
     7981 taatgattat gtgcgtttaa aaccaaatat gaattactgg ggcaaaaaag catatattca
     8041 aaatatggtc gtagattttt ccacagaagc gaccggcagg atggcaaaat ttttaaataa
     8101 tgaatgtgat gtggttgctt ttccggaacc tagccaatta tcagtgttaa ataatcggca
     8161 gcttattagt agtaaaggtg ctaatttggt ttatttagca ttcaatatgc aacggggtat
     8221 tgggcaggat ttggcattac gccaacgtat tgcacgcggc ataaatcgca aacgtattgc
     8281 agagaaatta ttttatggta caggtgaagt agcggataac ctattaccaa cagctttgtg
     8341 gtcgaaaaaa aataatggaa gctaccctta tcaaccacac caaaattcag gtgagcaagc
     8401 ggttgaaatg catgacagta ttataaatcg gtctttagat agcaaaacag agaccgaaga
     8461 agtaaaccaa aaacagcgct taaaactgtg ggtaattgat gaaaaacgag tttataatca
     8521 acacccatta aaaatggcag aaatgatacg tgctgattta gctacgcaaa atttagaggt
     8581 cgaaattcgc gcagtaagtc gagcttattt ggtgcaacag cttgctaata aaagtgcgga
     8641 ttatgatttg attttaggtg gttggttagc aaataatctt gatcctaaca gttttttgga
     8701 ggccttactc agttgtaaag ctgcggaaac ggtgactaat ttatcaaatt ggtgcaatga
     8761 agattttgat ttttggttac aaacagcccg tctaagtgat gatccggcat cagctaattt
     8821 attgtatgaa tttgcacaaa aattattaga agagcaattg cctattctcc ctttaatgaa
     8881 tgctaatcgt gtattagtca taaaagatgg agtgaaacag gcagatattt cccctttcgg
     8941 ccaggtaaaa ttatcagagt tacgtttggg cttggggcat aaaaaaggaa actaattatg
     9001 ctgattgtct tttttcgaaa aatttttcta accttgatta cgttgatttt tttgtcactt
     9061 atcagtttta atattctgtt acgagatcca ttaaaccact tagccgagtt aggctggttt
     9121 gaggcttatt gttattatgt aaaatctctg ctaaatggtg attttggtat tagtttcagt
     9181 aatggagaac cgctcacagc gcaaatttta caggtgttcc cggctacaat tacgctttgt
     9241 ttatcggctc tcattgtttc tttaattatt ggtttgcctc ttggtttttt tgcggctact
     9301 cagcaaaaaa atatggttgg gcgattatta aatacactag gttcattgag tttagccgtg
     9361 ccggtatttt ggctggcatt agtgctaatg tattacgctt ctctcaatca gtgggaagtg
     9421 tcagcaattg gagaaatcca ttcgctttat ccgaaacaga tggtaaccgg ctttttgcta
     9481 ttagatattt ggttatctga tgtaccttat aaattaaaaa tgatgcagag tgctttacat
     9541 cacttagctt tgccgacatt agtcttggct gtgccagcta cattagaagt tatgcatatt
     9601 actcaagcta gagcaggtta tgtaatgaaa caaaattaca ttaaaatagc gaaaacgcgt
     9661 ggctggacac cgtttagagt ttggagaacg catattattt gtaatacttt acctgcatta
     9721 ttacctatga ttgcccgtac ctttatttta atttttgcct tcggtatgtt aattgagaac
     9781 atatttagct ggggaggaat tggacgttgg ctgataaatg cccttgctat tcaagactat
     9841 aatgcgattt cagcgggagt agttgcaatc ggggtgtttg tgttattagt agatatggtt
     9901 acaggctttg tgcgggtgat gttagaccca tcagataaaa aggattggta tggcagttat
     9961 taaagaaccc gagcaattta gagaaaccaa cgcatttaag gcattttggt ttcatttccg
    10021 acaagataaa cttgcacttg gcagttttta tctttttttg ctattactgg ctctcatttt
    10081 tgttggtagt ttgcttgctc cttacaatta taatgaacaa tttgttggtt tagaattaat
    10141 gcctccctct tgggacgaca aaggtcaaat cagccatttt ttaggcactg acgatttagg
    10201 acgggatatt ttaagccgta ttatgtatgg tttttactac acgcttggtt ccgcactgat
    10261 gattacctta ttaattgcga ttatcggcgg tatgatcggg atttatgccg ggctgaaaaa
    10321 aggacgttca ttttggttga ttagccattt gttcgatacc tttttattta tgccgatttt
    10381 attgattgcg atcatcattg caaccttaat ggaagcgagt ttggtcaatg caatgttggc
    10441 gattttctta gcgatgttgc cgcattttat ccataaaatt tatcaagcaa ccgaaaaaca
    10501 actcaaaaaa gagtacatca ttaccttaaa gctagacggt gcaagctgct ggtatttaat
    10561 tcgagaagtg attattccta atcttaccgg cgtggcaatt aaagcacttt cacatatttt
    10621 tgtgatcgcc atattagata ttagtgcgtt aagttttatt atgctggggg ctaaaagccc
    10681 gacccctgaa tggggagcga tgattcgtga atccatggaa ctgatttata tagctccttg
    10741 gacggtgata ttacctggct tagcaattat ttttagtatt tttaccgtta caatacttgg
    10801 tacacgctta agcgtgattt ttgaaaaata ccgtaaagaa tagtatttaa ataggatact
    10861 gacacataac aagcggtcat ttttaagtaa aattttacag attaaggaat agtatggcat
    10921 tacttgatat tcgccattta agtattgaaa ttgatatgcc aaaaggcaga gtaaaaatgg
    10981 tggataacat caacctgact gttgatgagg gcgaaatttg tggcttggtg ggagaatctg
    11041 gttcgggaaa aagcctcata gccaaagtga tttgcggtat gattaaagat gaatggattg
    11101 tgagtgcaga tcgctttcgc tttgacgata ttgaattact gaaactttcg ccagcggaac
    11161 gccgaaaatt ggtaggcgat catatttcaa tggtattcca agatccgctt actagccttg
    11221 acccaagcca gcaaattggt aaacaactga tgcaaaccat tcaatttaga gggaagtggt
    11281 ggcaacgatt tgggtggaaa aagaaaaaag caatcgagct actacaccgt gttggtattc
    11341 gtgatcatca agatattatg aaaagttacc caagcgatat taccgaaggc gaagctcaga
    11401 aagtgatgat tgcaatggcg gtggcaaatc agccccgatt attggtggca gatgagccga
    11461 ctaatattat ggaatcaacc acgcagttgc aggtttatcg cttgctttcc agtatgaatc
    11521 agaatttggg aacctcaatc ttgctggtga gtaatgacat gcgtagcatt caaaattggg
    11581 ttgattctta caatgtgctt tattgtggac aaaccgttga aattgcggat aaagagagca
    11641 ttcttgaatc gtcttaccac ccctatactc gagtgttact caatagttcg ccggactttt
    11701 ctcagccttt agcctttaaa agtagcttaa atacgctacg aggctcagtc ccgatgttac
    11761 aagaaatgcc gattggttgt cgtttaggcc ctcgttgccc ttttgcacaa aaaaaatgta
    11821 tcaacaaacc gccattagtg aaagtaaaac agcacgagtt tgcctgccat tttccgatta
    11881 actttagaga acaaaatttg cttaaaaata aaacggaaaa tacgccgttt gtggtggctg
    11941 aaatagcgga aaaagaggcg ttttaatgtg gttattattg gctaagtgta acgggtaaca
    12001 ttaaagtatc taatacgaaa ctcaagggta aatcgatcac cgcaagcacc gcgaatatac
    12061 cgccttcttg cattacttgg aaatctttta ttacgccggc ataaacacgg taatcctgtt
    12121 caaccaagct tagtactgtg ccacaagcgg tgaggttaaa catcaaatag agtagaaaaa
    12181 cgagtttaca agcggtcaat ttcatcaaaa aatctccaaa tacgctttta ttttacgcta
    12241 tttttatcgg gttggcgtaa aattcgtttt aaaaacagct attttcaggc agaatgtagc
    12301 cgaatcgaca ttaaatatac taagaggatc ttatatgcaa acttacaaca ttgcagtgct
    12361 tgccggtgac ggcattgggc cggaagtgat ggcagaagct atcaaagtgc ttgaagcgac
    12421 tcaacaaaaa tttggcttta aactaaattt taatcaatat aacattggtg gagcagcgat
    12481 tgatgctcaa ggtaaagcgt tacccgaaaa taccttaaaa ggctgtgaag aggcagatgc
    12541 gattttgttt ggctcggtag gtggcccgaa atggacgcat ttactacctg atgagcaacc
    12601 tgaacgaggt tcgctattac cactgcgtaa acatttctcg ctattctgta atttacgccc
    12661 tgctgcattg tatcaagggc tggaaaaatt ctgcccatta cgtgccgata ttgctgctaa
    12721 aggttttgat atggtggtgg tgcgtgaatt aaccggcggg atttattttg gacagccgaa
    12781 aggccgtgat ggtgaaggtg cgcaaacgag agcgtttgac accgaagtat actacaaata
    12841 tgaaatcgag cgtattaccc gtgtggcgtt tgaatctgca atgaaacgta aaaaacacgt
    12901 aacctctgtg gataaagcca atgtgttaca aagctcgatt ttatggcgtg aaaccgtcac
    12961 ggaagtagct aaagagttcc cagaagtcac gcttgagcat atgtatattg ataatgcgac
    13021 aatgcagcta atcaaagcac ctgaatcgtt cgatatttta ttatgctcaa acatcttcgg
    13081 cgatattatt tccgatgagg ctgcaatgat tacaggttct atgggcatgt tgccttcagc
    13141 cagcctcaat gagcaaggtt tcggcttata tgaaccggca ggcggttcag caccggatat
    13201 tgccggtaaa aatattgcga atccgattgc gcaaatttta tcagccgcaa tgatgttgcg
    13261 ttatagcttt aacttaggtg atgctgctga tgcgattgaa acagcgatcc aaaaagccct
    13321 tgctgatggc taccgtaccg ctgatttagc tgatgacagc aaaccgcttt ctacctcaga
    13381 aatgggcgat attattgcga aaaatattct cgcttaaggc tagaagttaa atagcacaag
    13441 cggtcattat tcgccaaatt tttgcaaatt ttccgctaat aatgaccgct tgtttattac
    13501 tcgttagccg tcaatctctt cgcctgtttc ttcccactta aaattcaatg ccgcagagtt
    13561 gaggcaaaaa cgcaaccctg ttggtggtgg gccgtccgga aaaacgtgtc ccatatgcga
    13621 atcacaattc ccacaacgaa tttcgatacg atgacgtcct aaactgtaat catctaagta
    13681 acgtagtgac gattctgaaa tcgtttggta aaaacttggc cagccacaac cggcatcaaa
    13741 tttagtatct gagtgaaata aatcgttatg gcatctggca caacgataaa ttcctacccg
    13801 atgttcattc aaaaattttc cggtaaacgg acgttccgta ccgtggttga ttaaaatatc
    13861 aacttgttgt tctgtcaggg cgtgaatagg tttaatcatc agcaattctc ctaagatagt
    13921 agcgaagtca ttgtagcttt ttttgacctg aaaatcgtta taaatttcaa aatttgacat
    13981 agatcacaaa aaatttatct gttatattgg aagggttctt ttggcttgtc aggaaagtga
    14041 aaagatgtgc tataattcaa gcatctttag tgtagtacat aaagaacaaa ttttgtttaa
    14101 ctttaatata ggtagaaaaa tctatggcaa ttaaaattgg tattaacggc tttggccgta
    14161 tcggtcgtat cgttttccgt gcagcacaac accgtgatga catcgaagtg gtaggtatca
    14221 acgacttaat cgatgttgat tatatggctt atatgctgaa atatgattca actcacggtc
    14281 gttttgacgg tactgttgaa gttaaagacg gtcaattagt agttaacggt aaagcgatcc
    14341 gcgtaacagc tgagcgtgac ccggctaact taaaatggaa tgagatcggt gttgatatcg
    14401 cagttgaagc aacaggttta ttcttagatg atgaaactgc tcgcaaacac atcaccgcag
    14461 gtgcgaagaa agttgtttta accggtccgt ctaaagatgc aacacctatg ttcgtaaacg
    14521 gcgtaaactt tgatacttac gcaggtcaag acatcgtgtc taacgcttct tgtacaacta
    14581 actgtttagc accattagcg aaagttattc acgaaaaatt cggtatcaaa gaaggtttaa
    14641 tgacaactgt tcacgcaact actgcaacgc aaaaaacagt agatggtcca tcagcgaaag
    14701 actggcgtgg tggtcgtggc gcgtcacaaa acatcattcc ttcatcaaca ggtgcagcga
    14761 aagcagtagg taaggtatta cctgcattaa acggtaaatt aaccggtatg gctttccgtg
    14821 ttccaaccac taacgtttct gttgttgatt taactgtaaa cttagaaaaa ccagcaactt
    14881 atgcagaaat ctgtgctgaa atcaaacgtg cttcagaaaa cgaaatgaaa ggcgtattag
    14941 gctacacaga agatgcagtt gtttcaacag acttcaatgg tgcaactgaa acttcagtat
    15001 ttgatgcagc agcaggtatc gcattaactg atactttcgt taaattagta tcttggtacg
    15061 ataacgaagt tggctactca aacaaagtat tagacttagt tgctcacgta tat
//
LOCUS       DANLTI010000060        15101 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.060, whole genome shotgun sequence.
ACCESSION   DANLTI010000060 DANLTI010000000
VERSION     DANLTI010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15101
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.060"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..326)
                     /locus_tag="PXB09_001439"
     CDS             complement(<1..326)
                     /locus_tag="PXB09_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233558.1"
                     /translation="MGIKVLFGTKISAELQYLPEKDLVKILQFKQHVEIYGLENLAGR
                     NKSSDDVPTNDPYWAEKVAKAQKYSLWHYHIGIPEYDTSQGFGNYTSEYILHYVKGEN
                     FIQIVD"
     gene            complement(316..789)
                     /locus_tag="PXB09_001440"
     CDS             complement(316..789)
                     /locus_tag="PXB09_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233559.1"
                     /translation="MMKNLPLSMADTLAVIYPAFDFAADDKPATEQQISLLNFRITMA
                     NQLLIACIETIEKNPNFWAEIDLNDFKKYLNQNKVVIFDTQQYFTDGSRTMAILDNMK
                     SNIRKIEQQLSQATAFNFDLERMKERLNDTFHEVPKDITNVNEFRNWLKGVANGH"
     gene            complement(857..1945)
                     /gene="rlmM"
                     /locus_tag="PXB09_001441"
     CDS             complement(857..1945)
                     /gene="rlmM"
                     /locus_tag="PXB09_001441"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDL5233560.1"
                     /translation="MFNKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVI
                     FECYQAGEADRLAQALKFEQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNPRQS
                     SDVFVETPDTNEAKELLTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGA
                     CYVGYAYNHNKSPFFMGIPRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVG
                     VDLGACPGGWTYQLVKRGVFVYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQID
                     WLVCDMVEQPIRISKLIAKWLTNGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKH
                     GFWFKMQAKHLYHDREEITVHIAVMGQK"
     gene            complement(1945..2337)
                     /locus_tag="PXB09_001442"
     CDS             complement(1945..2337)
                     /locus_tag="PXB09_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDL5233561.1"
                     /translation="MKNKFVAIAAFSGLFTVAFGAIASHALSAQLSPKALGWIETGIK
                     YQMFHTLAILALGLFQIANFGQNPPVCRAKAFNIIGSNWALGILLFSGNLYLLALNVP
                     TIHWLTPIGGLCFMLGWIALIYISVRKA"
     gene            complement(2444..3845)
                     /locus_tag="PXB09_001443"
                     /pseudo
     CDS             complement(2444..3845)
                     /locus_tag="PXB09_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
     gene            complement(4000..6357)
                     /locus_tag="PXB09_001444"
     CDS             complement(4000..6357)
                     /locus_tag="PXB09_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDL5233562.1"
                     /translation="MNTALEKGKFVFLDKPKNTITTAAHWGALNVTVENGKVVKSEGS
                     LAKNHQNELQDVVADQLYSPVRVKYPMVRKGYLEGNKDTTLRGRDKWVRISWDKAFEL
                     VSGEIQRVREQYGSESIFGGSYGWYSSGSLHASRTLLQRYLNVTGGFTNTKGDYSTGA
                     VQVIMPYVLGNIEVYAQQTSWHTIVESTELLVIWSSNPLNTLRIAWTSAEPEGIDYLA
                     KLKASGKRIICIDPVKSETCQFLEAEWLPINTGTDVALILGIAHTLITENKHDHDFLT
                     KYTVGFEQFADYVLGKADNLPKTAEWASQICDIPEEVIKTLANDFVTHRTMLMSGWGL
                     QRLQHGEQSHWALVTLAAMLGQIGLPGGGFGLNYRYSTNGLNVNSGVRLGAINAGKPN
                     PDMPFFPVSRIADALLKPNQPYDYNGQTLHYPNIKLVYWAGGNPFAHHPDTNYLVKAW
                     QQPETMIVNECYWTPTARMADIVLPATTSYERNDLTVAGDYVAKHIIPMKQVVEPQFE
                     AKNDYDIFAELAKRAGKEQAFTEGKSEMEWLKEFYQVAFEAGEKANTPLLDFEAFWAE
                     NKVLSFEAEHQNNTFVRYQDYRTDPIKHKLATPSGKIEIFSETIAKMNYEDCKGHPTW
                     FEHHEYSGKTNEAEPLALVTPHIKYRLHSQLAYSSLRQYYEVNGREPMLIHTKDAADR
                     GITSGDIVRIFNKRGQVLAGAVVTDGIIQGTVALYEGGWYDPQDLGKTDTPLCKNGNP
                     NVLTRNEGSSKLGQGNAPNTTTVQVEKYVGDAPEVTVFKAPFFSE"
     gene            complement(6493..9099)
                     /gene="acnB"
                     /locus_tag="PXB09_001445"
     CDS             complement(6493..9099)
                     /gene="acnB"
                     /locus_tag="PXB09_001445"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDL5233563.1"
                     /translation="MENFIENYQQQVDERAALGVVPQPLSAEQTAQLVELLKNPPAEQ
                     AVFLLDLFTNRIPAGVDEAAYVKAAFLADITKGVATSPLISPAHAVKLLGTMQGGYNI
                     ETLLSALDNPELAPIAVEALSKTLLMFDNFHDVKERADQGNPFAQQVLESWANADWFT
                     SRPKLAEKLTVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNERDGIFPDENG
                     HTGPIKQLEALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGEDIPYIPNKRAGGVV
                     LGGKIAPIFFNTLEDAGSLPIEVDVTNLNMGDVIDIYPYAGKICKHNSDEVLAEFELK
                     TEVLLDEVRAGGRIPLIIGRGLTHKARVALGLPESDVFIKPQSVSESNKGYTLAQKMV
                     GRACGVEGVRPGQYCEPRMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVITHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGTMQPGITLRDLVHAIPYYAIQQGLL
                     TVEKKGKKNIFSGRILEIEGLEDLKIEQAFELSDASAERSAAACTIKLNKEPIIEYLN
                     SNITLLKWMIAEGYDDKRTLERRIANMQAWLDNPELLEADENAEYAAVIEINLDEIKE
                     PIVCVPNDPDDARLLSQVQGDKIDEVFIGSCMTNIGHFRAAGKLLSQAQGELPTKLWI
                     APPTKMDAGLLTEEGYYSIYGKSGARVEMPGCSLCMGNQARVANNANVVSTSTRNFPN
                     RLGQGANVYLASAELAAVSALLGKLPTPQEYLDYMNNLQKDKDDIYRYMNFDQINSYV
                     KKADNVIVQVAV"
     gene            complement(9119..10366)
                     /gene="icd"
                     /locus_tag="PXB09_001446"
     CDS             complement(9119..10366)
                     /gene="icd"
                     /locus_tag="PXB09_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDL5233564.1"
                     /translation="MQTQVQIPQGETIQLNQDGSLQVPDNPIIPFIEGDGIGVDVTPA
                     MKAVLDAAVEKAYQGKRKIAWMEIYAGEKANKLYGENTWLPDETLELIRQYHVAIKGP
                     LMTPVGGGIRSLNVAMRQGLDLYNCLRPIRYYDGTPSPVKHPELVDMVIFRENSEDIY
                     AGVEWVAGSPEANKVIEFLQQEMGVKKIRFTEDCGIGIKPVSKQGTQRLVRAALQYVI
                     DNNRKSLTLVHKGNIMKFTEGAFKEWGYQVAEEFGAKLIDKGPWMSLTNPKTGEEIII
                     KDSIADAFLQEILLHPTEYDVIATLNLNGDYISDALAAQVGGIGISPGANIGFEAAIF
                     EATHGTAPKIAGQNKGNPGSLILSGEMMLRHLGWVEAADLVVKAVSKTIANKTVTFDF
                     AEMLEGVTLRSTSEFAQDIIANM"
     gene            10600..11880
                     /locus_tag="PXB09_001447"
     CDS             10600..11880
                     /locus_tag="PXB09_001447"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005762304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDL5233565.1"
                     /translation="MSKATLTLETGEKLELNMQKGTLGYQTIDIQPFLKHKLFAYDPG
                     LVSTAVCRSNITYVDGDEGVLLYRGYPIDQLAKHSDYLEVGYMLLFGERPTKEEYKDF
                     VQLIKKHTLVHEQLTKFFSGFRRDSHPMAVMCGVSGALAAFYHDAIDVNNQAHRELTA
                     IRLLAKIPTLAAMCYKYSIGQPFMFPQNHLSYAGNFLYMMFATPCEPYEVNPVLERAL
                     DRIFILHADHEQNASTSTVRTAASSGANPFACIAAGIASLWGPAHGGANEACINMLKE
                     IGTVDRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMRETCHEVLKELNIDNPL
                     FEVALELERIALSDPYFIEHKLYPNVDFYSGIVLKAIGIPTSMFTVMFALARTVGWIA
                     HWKEMYLQGNIKIVRPRQIYTGHTKRDFEPMDKS"
     gene            complement(11953..13182)
                     /locus_tag="PXB09_001448"
     CDS             complement(11953..13182)
                     /locus_tag="PXB09_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233566.1"
                     /translation="MFQAEPKNGKVTVEVLKQYLIDELKIDEEEIAIVIGNQHELDNI
                     DLFNPQCKINYIITVEALKEGWDCPFAYIFCSVQNVSSSKEAEQLLGRVLRMPYAKHR
                     QIEDLNRAYAPLSSKSFGETARNLQDKLIGMGFEALEVAEMLRIPQQENWIGNEGDLF
                     YTPTTVLALTQLPEMSDLSEAKRSQLKITEQEGHILVQVKGNLSEKLEKALIRTATGK
                     KKEQIEQQLQIHQNRVEILSSPAEKGEIFKVIPQLCMNIQGEFDLADSQVLLDYQSWN
                     LLDYPAKLDGFRLQENSQSFEIDVEDKRVSYHFNQQQLSFSDDWLRNPVKRGFSLPLA
                     HQNFYPDFIVELIDGRILIVEYKGEQLKSNEDSKEKALIGNLWEKLSQGKGLFIMAVK
                     SDENGQDVRTQLLNKLA"
     gene            complement(13149..14138)
                     /locus_tag="PXB09_001449"
     CDS             complement(13149..14138)
                     /locus_tag="PXB09_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5233567.1"
                     /translation="MKLKNYQNEALNRVSHYFSACLQSDAKTAFSQIQPEYSYKIPSE
                     HSNLRDVPYVCVRIPTGGGKTLLASHSIARIAKQYLDCDFPVTLWPVPSRTIKTQTTE
                     ALKNPQHPYRAVLDKTFNREVMVIESEDFDLLRPQDFGNKAIVIVSTIQNFRVENQDG
                     RKIYAFNEKLTAHFERLLPHIQANLEKISTTDLQENGLTSKQTGKIKCSFANLLRAYQ
                     PLVIVDEAHNARTSLSFDVLSQLSPSAILEFTATPNTDRKAGSNVLYHVSASHLKAEE
                     MIKLPIVLTEHHNWQQAIDGAVINRGALAQKAQYESEYVRPIYCFKLSRKTAK"
     gene            complement(14154..14672)
                     /locus_tag="PXB09_001450"
     CDS             complement(14154..14672)
                     /locus_tag="PXB09_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5233568.1"
                     /translation="MNRRYIGIEIGEHAKTHVVPRLKKVIEGEQGGISKAVNWQGGGS
                     FRFCELGEEVFDAFGSLNPNIRFDDLAAHIWYLENHFPLQKNSEKSPLVGTFNGKAYY
                     LLYNGILGDKRPQSGNVLTRKLMAELPYFAEFIQQGMDIVVYGEACRLGEVQLAEKKI
                     TFKQIPYDVMSR"
     gene            complement(14682..14753)
                     /locus_tag="PXB09_001451"
                     /pseudo
     CDS             complement(14682..14753)
                     /locus_tag="PXB09_001451"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(14760..>15101)
                     /locus_tag="PXB09_001452"
     CDS             complement(14760..>15101)
                     /locus_tag="PXB09_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5233569.1"
                     /translation="FSKKTSSITLISELIIEDQWNKNTVEIEGEWRYSQKSIDEQLKN
                     GDYYIIKSLDFRPRRVFERSAEKKKIHNLISRAHYDMATNEDSASEHLELFGEDIAED
                     SFDYPKPEKLI"
BASE COUNT         4338 a         3403 c         2839 g         4521 t
ORIGIN      
        1 aaatcaacaa tttgaataaa gttttcacct ttcacataat gtaaaatata ctcagaagta
       61 taattaccaa atccttgact ggtatcatat tctggaatgc cgatatgata atgccataaa
      121 gaatattttt gtgctttagc caccttctct gcccaataag gatcattcgt tggcacatca
      181 tcagaacttt tatttcgacc agctagattt tccaatccat aaatttcaac gtgttgttta
      241 aactgcagga ttttgactag atctttttca ggcaaatatt gcaattcggc tgaaattttt
      301 gtaccaaata aaactttaat gcccatttgc aacacctttc aaccagtttc taaattcatt
      361 aacattcgtt atatctttag gcacttcgtg aaaagtatca tttaaccgct ctttcattcg
      421 ctctaagtca aaattaaatg cggttgcttg agagagttgc tgttcaattt tgcgaatatt
      481 ggacttcata ttatccaata tagccattgt ccttgagcca tcagtaaaat actgttgggt
      541 atcgaaaatc accaccttat tttgatttag gtattttttg aaatcgttta aatcaatttc
      601 agcccaaaag tttggatttt tttcgatagt ttcaatacag gcaattaata attgatttgc
      661 cattgtaata cgaaaattta acaatgagat ttgctgctct gttgcaggtt tatcatcagc
      721 tgcgaaatca aatgccggat aaatcactgc aagcgtgtca gccatagata agggtaaatt
      781 tttcatcatc tctccttacg gaagaagttg tcattatcta ctggattact taaaaaaaca
      841 acttattcat tttatgctat ttttgcccca tcaccgcaat atgtaccgta atttcctcac
      901 ggtcgtggta gaggtgttta gcttgcattt tgaaccaaaa cccgtgtttc gttagctctt
      961 cttccaagaa attgaggcat agttgcactt cttgataacg ttttttcatc ggcagtttta
     1021 ggttgaaaat cgtttctcga caccaaccgt tagtcagcca ttttgcaatg agtttcgaga
     1081 tacgaatcgg ctgctctacc atatcacaaa ccagccaatc gatttgttta cgcttaggcg
     1141 gttggaattt aaacccatct tcagggcaat gctcaattct tccggtttcg tgtaaacttg
     1201 ctgccatttt gccgtgatcg actgcataga caaaaacacc acgtttgact aattgataag
     1261 tccaaccacc cggacaagcc ccaagatcga cccctaccat cgtatcatta aagcgttttt
     1321 tctcctctgc ttgcggaata aaagttaaaa tcgcctcttc taatttaagc gttgagcgac
     1381 taggtgcctc agccgggaat tttaaacggg gaatccccat aaaaaacggc gatttattat
     1441 ggttgtacgc atagcccaca tagcaagctc ccggacgagt aaataaaata tgcaagctca
     1501 cactaccctg catattttcc gatttcccca accaaccttg ttttttcaat gccgaccgta
     1561 atggcacagt aaatttacga cagaaagtta ataattcttt cgcttcgttg gtatccggtg
     1621 tttcgacaaa tacatcagaa ctttggcgag gattaagttc ggcatattgg gctaaaatcg
     1681 gcgaaattcg atcattttca gacagatttt gcaacaaatc cccaacaacc aacatttggc
     1741 gaacaaaaat aagctgttca aactttaacg cttgggctaa tcgatctgct tcccctgctt
     1801 gatagcactc aaaaatcaca tagccactat tttctttaag gttggcaaag ccaaaaatgc
     1861 cctgttgtgc agctttatcc gtgatttcgc ctgctacctc tttttcaaac cctgctcggc
     1921 aatataaggc taatttattg aacattaggc ttttctcaca ctgatataaa ttaacgcaat
     1981 ccaaccaagc ataaagcaga gaccaccaat aggcgtaagc caatgaatag tcggcacatt
     2041 taacgccagt aagtacaggt tgccactaaa aagcagaatg cctaacgccc aattgcttcc
     2101 gatgatgtta aaggctttgg ctctacaaac gggtggattt tgcccaaaat ttgcaatttg
     2161 gaataaacct aaagctaaaa tggcaagggt gtgaaacatt tgatatttaa tccccgtctc
     2221 aatccagcct aaggctttag gcgataattg agccgataat gcgtggctgg ctatcgcccc
     2281 aaatgccaca gtaaataagc cgctgaatgc ggcaattgct acaaatttgt ttttcataag
     2341 ttgaagatag gtatgatgtt agatggctta ctatatcata ttatcgaaac caacaagcgg
     2401 tgaaattttg caaaaaaatt acaaaaaatc accgtttgta tgcttaatgg ttcaagataa
     2461 tatccacatc ttccgattta tcgtgaaccc caaatctatc tactaaggtt ttgctggcct
     2521 catttaatcc gataatttct acctcaacat cactttttcg atatttcaac acaactttat
     2581 ctaacgctga aactgccgtt acgtcccaaa agtgagcgtg ggttaaatca atgtggactt
     2641 ttttcagttc tgaacgggta aaatcaaatt gtgcgataaa atcatcagat gaggcaaaaa
     2701 atacttgccc gataacatca taacgcaatt cctctttctc tatagcactt gttttaaccg
     2761 ccatataacg tccaatttta ttcgcaaaga ataatgccga gagcaacacg ccggaaaata
     2821 caccaagggc taagttatgt gtataaacca caattgcaac agtgactaac atcactacat
     2881 taaagccgat tgggtgcgtt tttagctctt ttaaggaatg ccaattaaag gtgccgatag
     2941 agaccataat catcactgca actaatgcag ccatcggaat cactctcaaa atatcgctca
     3001 aaaagaccac aaaaatcagt aataatattg gcaatgccct gccctttaca ttcacggttt
     3061 ttatcgctgt ctgtctctgt catttcatca acaatcgttg ccgtcattaa agattccaat
     3121 aaccctactg cggccaagct gaaagaataa ggcaaaataa tccataaggt gtctaaatta
     3181 agcggaatat cgggtaataa aaacaccggt aaggtatcgg gtaattgccc catatcccca
     3241 acggtacgaa catcaatgcc ttgccataat gtgaaaagtg ttaaagcaat aatggtcact
     3301 aatggtgagg gaatgatttt tccaatcacc ggtacataag gaaaaagata aatgatagca
     3361 agccctgcta ccaccagtgc ataagtatgc caagttgtat tttgtaactc aggtagttgt
     3421 gccataaaaa ttaaaatggc aagtgcatta acaaacccaa tcactacggc tcgtgccaca
     3481 aaccgcataa gcgagccgag ttttaaccaa ccggcaataa tttgcaacac gcctgttaat
     3541 aaggtggccg ctagcatata ttgtaaaccg tgatccctca ctaagcctgc taataccaga
     3601 gccattgcac cggttgctgc agaaatcatc gccggtctgc cgcccacaaa actgataatt
     3661 actgcaatac aaaatgaggc atataaacca atttgtggat caacccctgc aataattgaa
     3721 aatgctatgg cttctggaat taacgccaaa gccaccacta aaccagagag aacatcacct
     3781 cgtacatttg aaaaccattg ttgtttaatt accgtaggcg aaaattgctg aaataaagtt
     3841 gtcattatta cccttaaata aaaagaaaag ccgagcaaag tcggctaaaa atgaggcgag
     3901 agagtagcaa attagtgaaa agtcgtcaaa taaacaagcg gtcttctttc gctctttttt
     3961 tgcaaaaaat agtagaaaaa tgaccgcttg gattaattgc tattcactaa aaaaaggggc
     4021 tttaaacacc gtcacttcag gtgcatctcc cacatatttt tccacttgaa ccgtggtagt
     4081 gttcggtgca ttgccctgcc cgagttttga tgaaccctca ttacgggtta gcacattcgg
     4141 gttgccgttt ttgcatagtg gagtatctgt tttgcctaaa tcttgcgggt cataccaacc
     4201 accttcgtat aacgctactg tgccttgaat gatgccatca gtcaccactg ctcctgccaa
     4261 cacctgccct cgcttgttaa aaattcgcac aatatcaccg cttgtaatgc ctctgtcagc
     4321 ggcatctttt gtgtgaatta gcattggttc tctgccgttt acctcgtaat attgacgtaa
     4381 tgaggagtaa gcaagctggc tgtgtaaacg gtatttaata tgcggtgtaa ctaatgccaa
     4441 cggctcggct tcgttggttt tgcctgaata ttcgtgatgt tcaaaccaag tcgggtgtcc
     4501 tttacaatct tcataattca tcttggcaat ggtttcggag aaaatctcaa ttttgcctga
     4561 tggcgttgcc aatttgtgtt taatcggatc agtacgataa tcttgatagc gaacgaaagt
     4621 attattttga tgttctgcct caaagctcaa cactttattt tccgcccaaa atgcctcgaa
     4681 atccagcaat ggcgtattag ctttttcccc cgcctcaaag gcaacttggt aaaattcctt
     4741 aagccattcc atttcgcttt tgccttcggt aaatgcttgt tctttaccgg ctcgtttcgc
     4801 taattcggca aaaatatcgt aatcattctt cgcctcaaat tgcggttcaa ccacctgttt
     4861 catcgggata atatgttttg ctacataatc accggcaacg gtgagatcgt ttcgctcgta
     4921 gctggtggtt gcgggcaata caatatctgc cattcgagcg gtcggtgtcc agtaacattc
     4981 attgacgatc atcgtttccg gctgttgcca cgctttcact aaatagttgg tatccgggtg
     5041 gtgagcaaac ggattacccc ccgcccaata gactaatttg atgttcgggt aatgtaatgt
     5101 ttgcccgttg taatcataag gctgattcgg tttgagcaac gcatcggcaa ttcgagacac
     5161 cgggaaaaac ggcatatcgg ggttaggttt acctgcattg attgccccta aacgaacacc
     5221 ggaattaaca tttagcccat tggtagaata acgataattt aagccgaaac cgccgcccgg
     5281 caagccaatt tgcccgagca tagcggcaag agtcactaac gcccagtggc tttgctcccc
     5341 gtgttgcagg cgttgcaagc cccagccgga catcaacatt gtgcggtgag taacaaaatc
     5401 atttgctaag gttttaatca cctcctccgg aatgtcacaa atttggctcg cccactctgc
     5461 tgttttaggt aaattatctg cttttcctaa cacataatca gcaaattgct cgaaaccaac
     5521 agtatattta gttaagaagt cgtgatcgtg cttgttttca gtaataaggg tgtgggcgat
     5581 ccctaaaatc agtgcaacat ccgtgccggt attaataggc aaccactctg cctctaaaaa
     5641 ttgacaggtc tcgcttttca ccgggtcgat acaaataatc cgtttaccgc ttgcttttaa
     5701 tttggcgaga taatcaatcc cctccggttc ggcagaggtc cacgcaatgc gaagtgtatt
     5761 cagtggatta gacgaccaaa ttaccaataa ttctgtgctt tctacaattg tgtgccaact
     5821 ggtttgttga gcatacacct caatattgcc taatacataa ggcataatca cttgcaccgc
     5881 accggtggaa taatcgcctt tagtattggt aaagccgcct gtgacgttta aataacgttg
     5941 caaaagcgtg cgagaggcgt gcagtgaacc actgctatac cagccgtaag aaccgccgaa
     6001 aatggattcg ctgccatatt gctctcttac ccgttggatt tcgccggaaa ccagctcaaa
     6061 ggctttgtcc caagagattc tcacccactt atctcgccct cgcaaagtgg tgtctttatt
     6121 cccttccaag tagcctttcc gcaccatcgg atatttcacc cgaaccgggc tatagagctg
     6181 atccgccacc acatcttgca attcgttttg gtgatttttc gctaaactgc cctctgattt
     6241 caccactttt ccgttttcca ccgttacatt taatgcaccc cagtgggcgg cggtggtaat
     6301 ggtatttttc ggtttatcca aaaagacaaa cttccctttt tctaatgctg tgttcattta
     6361 aattaatgcc ttttctgtta caaaattgag aggaatttac tggattaagc caaaagttgc
     6421 aaccacaagc ggttgttttt agccaaaaat ttgcaaaaca aaacccacct aaaaaggtgg
     6481 gcttcaagga agttaaacgg caacttgaac gattacattg tccgcttttt tcacataact
     6541 attgatttgg tcaaagttca tatagcggta aatatcgtcc ttatctttct gcaagttatt
     6601 catatagtct aggtactctt gcggtgtcgg caatttaccc aataacgcag aaactgcggc
     6661 taattctgct gaggctaaat acacatttgc cccttgccct aaacggttcg ggaagtttcg
     6721 ggtagaggta gaaaccacat tagcattatt tgccactcgg gcttggttac ccatacagag
     6781 agaacagccc ggcatctcta cccttgctcc gcttttgccg taaatgctgt aatagccctc
     6841 ttcggtcagc aagcctgcgt ccattttagt cggcggagca atccataatt tagtcggcaa
     6901 ttcgccctgt gcttggctta acagtttacc tgccgcacgg aaatgcccga tattagtcat
     6961 acaagaacca ataaagactt catcaatttt atcgccctgt acttgagaaa gcaggcgagc
     7021 atcgtcaggg tcattcggta cgcacacaat cggctctttg atttcatcta agttgatctc
     7081 aatcactgcg gcatactccg cattttcgtc tgcctctaaa agctccggat tatccaacca
     7141 cgcttgcata ttggcgatac ggcgttctag cgtgcgttta tcgtcatagc cttccgcaat
     7201 catccatttt aaaagcgtaa tattagaatt cagatactcg ataatcggct ctttgttgag
     7261 cttgatggta caggctgcag cagagcgttc agcagaagca tcagaaagct cgaaggcttg
     7321 ttcgattttc agatcttcca acccttcaat ttctaaaatt cgaccggaga aaatattttt
     7381 cttacctttt ttctccaccg tcagcaagcc ttgctgaatg gcataatacg gaatagcgtg
     7441 aaccagatcc cgtaaggtaa tgcccggttg cattgtgccg gaaaaacgca ccaagaccga
     7501 ttccggcata tctaacggca tcacccctgt tgccgcagca aaggcaacta agcccgaacc
     7561 ggcagggaat gaaatcccga ttgggaaacg ggtgtgggaa tcgccgcctg taccgacagt
     7621 atccggcaat aacatacggt ttagccaaga gtgaatcacg ccatcacccg ggcgaagtga
     7681 cacaccgcca cggttcataa taaaatcagg caaagtgtgg tgggtaatta cgtccaccgg
     7741 tttcgggtaa gcggcagtat ggcagaacga ttgcatcaca agatctgccg agaagcctaa
     7801 acaggctaaa tctttcagct catctcttgt cattggtcct gtggtatctt gtgaaccgac
     7861 agacgtcatt cgaggctcgc aatattgccc cggtcgaacg ccttctacgc cacaagctcg
     7921 ccctaccatt ttttgagcaa gggtgtagcc tttgttactc tctgaaaccg actgcggttt
     7981 aataaataca tcactttcag gcaagccaag tgctactctg gctttatggg tcaaaccacg
     8041 tccgataatc agcggaattc gcccgcctgc acgcacttca tcaagcaata cttcggtttt
     8101 tagctcaaat tcggctaaga cttcatcgga gttgtgtttg caaattttgc ctgcataagg
     8161 gtaaatgtcg attacatcgc ccatattcag gttggttaca tccacttcga tcggtaaaga
     8221 accggcatct tctaatgtgt taaagaaaat cggggcaatt ttaccgccta acaccacccc
     8281 accggcacgt ttgtttggaa tgtaaggaat atcttccccc ataaaccaaa gcacggagtt
     8341 ggttgcggat ttacgagaag agccggtgcc gactacatca ccgacatagg ctaacgggaa
     8401 acctttttct tttaatgctt ccagttgctt aatcgggccg gtatgaccgt tttcatcggg
     8461 gaaaataccg tcacgttcat ttttcagcat tgctaatgcg tgaagtggaa tatcagggcg
     8521 agaccaagcg tcttgagccg gggaaagatc atcggtattg gtttcgcctg tgactttaaa
     8581 taccgttacc gttaattttt cggcaagttt cgggcgagag gtaaaccaat cggcattcgc
     8641 ccaagattcc aatacttgtt gtgcaaacgg attaccctga tctgcccgtt cttttacatc
     8701 gtggaaatta tcaaacatca ataatgtttt agataaggct tctaccgcaa tcggtgcaag
     8761 ctcagggtta tccaacgcag acaataaggt ttcaatgtta taaccacctt gcattgtgcc
     8821 gagtaatttc actgcgtgag caggcgaaat gagcggcgat gtggcaaccc ctttggtaat
     8881 atcggctaaa aaggcggctt taacataagc ggcttcatca acacctgccg gaatacgatt
     8941 ggtaaaaaga tccaataaaa agaccgcttg ttcagccggt gggtttttca ataattcaac
     9001 cagttgagcc gtttgttccg cagaaagtgg ctgaggcaca acacccagtg ccgcacgttc
     9061 atcaacctgt tgttgataat tttctataaa attttccatc atcattccct ctccaacttt
     9121 acatattggc aataatgtct tgtgcaaatt ctgaggttga gcgtagagtt accccctcca
     9181 gcatttccgc aaaatcaaag gtgacagttt tattggcaat ggttttagac accgctttta
     9241 ccactaaatc agccgcttca acccaaccta aatggcgtaa catcatttcc ccacttaaaa
     9301 ttaatgaccc aggattgcct ttattttgcc ctgcaatttt aggggctgtg ccgtgtgtgg
     9361 cttcaaaaat agccgcttca aacccaatat tcgctcccgg tgaaataccg attccgccta
     9421 cttgtgcggc taaagcatca gaaatatagt cgccgtttag gttcagtgta gcaatcacat
     9481 catattcggt tgggtgtaac aagatttctt gtaaaaaggc atcggcaatg ctgtctttta
     9541 taatgatttc ctcaccggtt ttcggattag tcaagctcat ccaagggcct ttatcaatta
     9601 attttgcccc aaattcttcc gcaacttggt agccccactc tttaaatgct ccttcggtaa
     9661 atttcataat gttaccttta tgcacaagcg tgagcgattt acggttgtta tcaattacat
     9721 attgcaatgc agcacgcacc aagcgttgtg tgccttgctt agaaaccggc ttaattccga
     9781 taccgcaatc ttcggtaaag cggatttttt tcacgcccat ctcttgttgt aaaaattcga
     9841 tcactttatt ggcttcaggc gaaccggcaa cccattctac accggcataa atatcttccg
     9901 agttttcacg gaaaatcacc atatccacca gctcagggtg tttaaccggg cttggcgtac
     9961 cgtcataata acgaattggg cgtaagcagt tgtataaatc taatccttga cgcatcgcca
    10021 catttaaaga acgaataccg ccacccaccg gtgtcattaa aggaccttta atcgccacgt
    10081 gatattggcg gataagctct aaggtttcat ccggcaacca agtgttctca ccatataatt
    10141 tattcgcctt ttcgcctgcg taaatttcca tccaagcaat ttttcgcttg ccttgatagg
    10201 ctttttctac cgccgcatct agcactgctt tcattgcagg agtaacatca acaccgatgc
    10261 cgtcaccttc aataaatgga ataatcggat tatccggaac ttgtaaagaa ccgtcttggt
    10321 tcagttgaat agtttcgcct tgtggaattt ggacttgtgt ttgcattgat tttacccccg
    10381 taatgacgaa aaagtagtga cgaaaaatga atgttgacaa tcagccaaca atggattaac
    10441 tataaacagt aaatttctaa atgtaaataa agcaaaatgg gctgagagag aatttgtgat
    10501 ctaacgcaca tttatgtaaa taaaatgtaa aaaatcgttg tgattctttt ggaaatcatc
    10561 tagtttatct tataaatctc aaataaatag gagtaagcta tgtcaaaagc aacattaaca
    10621 ctcgaaacag gtgaaaaact tgaactcaat atgcaaaaag gaaccttagg gtatcaaacg
    10681 attgatattc agcctttctt aaagcataag ttatttgctt atgatcccgg attggtttcg
    10741 accgctgtat gccgatccaa tatcacttat gttgatggcg atgaaggggt tttactctat
    10801 cgaggctacc cgattgacca attagccaaa cattctgatt acttagaagt cggttatatg
    10861 ctgttattcg gcgaacgccc taccaaagaa gaatacaaag acttcgttca actcatcaaa
    10921 aaacacactc ttgtacacga acaactaacc aaattcttct ccggtttccg ccgagattcg
    10981 cacccaatgg cggtgatgtg tggggtaagt ggagctttgg ctgccttcta ccacgacgcc
    11041 attgatgtaa acaaccaagc ccaccgtgaa ttaaccgcca ttcgtttgtt agccaaaatc
    11101 ccaacccttg cggcgatgtg ttataaatac tctatcggtc agccgtttat gttcccacaa
    11161 aaccacttat cttacgccgg caacttctta tatatgatgt ttgccactcc ttgtgaaccg
    11221 tacgaagtga accctgtgtt agagcgtgcg ttagaccgaa ttttcatttt acatgcagac
    11281 cacgaacaaa acgcttcgac ctcaaccgtg cgaaccgccg cttcatcagg tgcaaaccca
    11341 tttgcttgca ttgctgccgg tattgcctct ctctggggac ctgcacacgg aggagcaaat
    11401 gaagcctgta tcaatatgtt gaaagaaatc ggcactgtgg atcgcattcc tgaatttatt
    11461 gctcgagcca aagataaaaa tgacccgttc cgcttaatgg gctttgggca tcgtgtctat
    11521 aaaaactacg accctcgtgc gaaagtaatg cgtgaaacct gccacgaagt gttaaaagaa
    11581 ctgaacattg ataacccact atttgaagtg gcattggaat tagaacgtat tgcgttaagc
    11641 gacccttatt tcattgagca taaactttat ccaaacgtag atttctactc cggaatcgtg
    11701 ctaaaagcca tcggtattcc aacctcaatg tttaccgtaa tgtttgccct agccagaacc
    11761 gttggctgga ttgctcactg gaaagagatg tatctccaag gcaatatcaa aatcgttcgt
    11821 ccacgtcaaa tctacaccgg acatactaaa cgtgattttg agccaatgga taaatcataa
    11881 gattggcaaa aaatcgaaaa attttaaccg cttgtttcca caagcggtta tattttgcat
    11941 aaaatttgca aatcaggcta atttatttag cagttgtgtt ctaacatctt gaccattttc
    12001 atcgcttttt acagccataa taaataagcc ttttccttga cttaatttct cccaaagatt
    12061 gccaattaag gctttttctt tagaatcttc attacttttt aattgttccc ctttatattc
    12121 cacaattaaa attcgaccat caataagctc tacaataaaa tcagggtaaa aattctgatg
    12181 agctaatggt aaagaaaacc ctctttttac aggatttctt aaccaatcat cagaaaaact
    12241 cagttgctgc tgattaaaat ggtaagaaac ccgtttatct tccacatcaa tttcaaaact
    12301 ttggctattt tcttgtaatc taaatccatc aagtttggct ggataatcca ataaattcca
    12361 actttggtaa tctaatagca cttgtgaatc agctaagtcg aattcgcctt gaatattcat
    12421 acacagttga ggtattactt taaatatttc ccctttttcg gcaggagaag ataatatttc
    12481 aactctattc tggtgaattt gtaactgttg ctcaatttgc tcttttttct tacctgttgc
    12541 agttcgaatc aacgcttttt ctaacttttc acttaaatta ccttttactt gcactaaaat
    12601 gtgaccttct tgctcggtaa ttttaagttg agaacgtttt gcttcgctta aatcagacat
    12661 ttcagggagt tgcgttaatg ctaaaactgt tgtcggtgta tagaataaat ctccttcgtt
    12721 tccaatccaa ttttcttgtt gtgggatacg aagcatttca gctacttcta atgcttcaaa
    12781 ccccattcca atcaatttat cttgtaaatt acgagccgtt tcgccgaacg acttagagga
    12841 aagcggagca taagcacgat ttaaatcttc aatttgacgg tgtttagcat aaggcattcg
    12901 caatactcgc cctaatagct gctccgcttc cttgctagag gaaacatttt gtactgagca
    12961 aaaaatataa gcaaaagggc aatcccaccc ttcttttaat gcctcaaccg tgatgatgta
    13021 attgatcttg cattgtggat taaataaatc gatattatct aattcgtgtt gattacctat
    13081 cacaatggca atctcttctt catcaatttt taactcatca attaaatact gttttaagac
    13141 ttctactgtt actttgccgt ttttcggctc agcttgaaac aataaatcgg acgaacgtac
    13201 tcgctctcat actgtgcttt ttgtgctaat gctcctctat tgattacagc cccatctatt
    13261 gcttgttgcc agttgtgatg ttcggtcagc acaataggca atttgatcat ctcttctgct
    13321 tttagatggc ttgccgaaac gtgatacaac acattacttc ctgcttttct atctgtgttt
    13381 ggcgtagcag taaattctaa aatagctgat ggggaaagtt gagatagcac atcaaaagag
    13441 agtgaagtcc gagcattatg tgcttcatca acaatgacca aaggctgata agctcgcaac
    13501 aaatttgcaa aagaacactt aattttgccc gtttgtttgg aggttaaacc gttctcttgt
    13561 agatcagtag tggaaatctt ttctaaattt gcctgaatat ggggtagtaa acgctcaaaa
    13621 tgagctgtta atttttcatt aaaagcatag atttttcgcc catcttgatt ttctacccga
    13681 aaattttgaa tagtagaaac gattacaatc gccttattac caaaatcttg tgggcgaagt
    13741 aaatcaaaat cttcagactc aataaccatt acttctcggt taaaagtttt atcaagtact
    13801 gcacggtaag ggtgttgcgg attttttaat gcttctgtag tttgggtttt aattgtacga
    13861 gaaggcactg gccacaaggt aaccgggaaa tcgcaatcca aatactgctt tgcaatacga
    13921 gcaatactat gcgaggctaa caacgtttta ccgccaccag ttggaattcg tacacaaaca
    13981 taaggcacat cacgcaaatt actgtgttca cttgggatct tgtaactata ttcaggttga
    14041 atttggctaa atgcggtttt tgcatcagat tgcaaacaag ccgaaaaata gtggctgaca
    14101 cggtttaatg cctcattttg gtaatttttt aatttcattt ttttctccta ctattaacga
    14161 gacattacat catatggaat ctgtttaaat gtaattttct tttcagctaa ctgcacttct
    14221 cctaaacggc acgcttcgcc atataccaca atatccattc cctgttgaat aaattcagca
    14281 aagtatggta actccgccat taattttcgt gtcagaacat taccactctg cggacgttta
    14341 tcgcctaaaa ttccgttata taacaaatag taggctttgc cgttgaaagt gccgacaagc
    14401 ggtgattttt cgctgttttt ttgcaaaggg aaatgatttt ctaaatacca aatatgggcg
    14461 gctaaatcgt caaaacgaat gttcggatta agtgaaccga atgcgtcaaa tacttcctcg
    14521 cctaactcac aaaagcgaaa cgatccacca ccttgccaat ttactgcttt tgaaataccg
    14581 ccttgctcac cttcaattac ttttttcaac cgtgggacaa catgggtttt agcatgttcg
    14641 ccaatctcaa taccgatata acgacggttc attttatgag caactgctgc agttgtacct
    14701 gagccaagaa agctatcgag gacgagatca tatggttcag tcgatgcttc taatacaaat
    14761 tagattaatt tttcaggttt aggataatca aatgaatctt ctgcaatatc ctccccaaat
    14821 aattctagat gttcactagc agagtcttca tttgttgcca tatcataatg agctctgcta
    14881 attaagttat gaattttttt cttttccgca cttcgctcaa atactctcct tggtcgaaag
    14941 tctaaacttt ttataatata gtaatcacca ttttttaatt gctcatcaat acttttttgg
    15001 ctataccgcc attcaccttc aatttctacc gtatttttat tccattgatc ttcaataatt
    15061 aattccgaaa tcaacgtaat tgaactcgtt tttttagaaa a
//
LOCUS       DANLTI010000061        15096 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.061, whole genome shotgun sequence.
ACCESSION   DANLTI010000061 DANLTI010000000
VERSION     DANLTI010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15096
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.061"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            50..628
                     /gene="ruvC"
                     /locus_tag="PXB09_001453"
     CDS             50..628
                     /gene="ruvC"
                     /locus_tag="PXB09_001453"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDL5233570.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQNGRQLEYLGSGAIRTTAEDLPTR
                     LKRIYAGVSEIITQFQPNMFAIEQVFMAKNPDSALKLGQARGTAIVAAVNHDLPVFEY
                     AARLVKQTVTGIGSADKVQVQDMVTRMLKLSAKPQADAADALAIAITHAHSIQHSLIV
                     AKQSQQNVSSEKEQILALMKTRYSRGRFRLKG"
     gene            complement(694..1974)
                     /gene="murA"
                     /locus_tag="PXB09_001454"
     CDS             complement(694..1974)
                     /gene="murA"
                     /locus_tag="PXB09_001454"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDL5233571.1"
                     /translation="MEKFRVYGPFSLNGTVDISGAKNAALPILFAAILAEKTVTLKNV
                     PDLKDVDTTFKILRQLGVTVEKGSDKGVVHIDASKINNYVAPYELVKTMRASIWALAP
                     LVARFQLGQVSLPGGCTIGARPVDMHISGLEKMGAKIELDEGYVKATSNGRLNGARIY
                     MDKVSVGATLSVMMAGTLAKGTTVIENAAREPEIVDTADFLNAMGAKISGAGTDMITI
                     EGVEHLGGCEHSVVPDRIETGTFLVAAAISGGRITCRNTKADTLDAVIEKLREAGMQV
                     DVTENTITLDSLGRRPKAVNIRTMPHPGFPTDMQAQFTLLNTVAEGTSRITETIFENR
                     FMHIPELIRMGAKAEIEGNIAICYGVEQLKSAEVMATDLRASISLVLAGCIATGETIV
                     DRIYHIDRGYEHIEEKLRQIGARIERFSAPFEGE"
     gene            complement(2084..2344)
                     /locus_tag="PXB09_001455"
     CDS             complement(2084..2344)
                     /locus_tag="PXB09_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5233572.1"
                     /translation="MNPSQIEEILKQALSDATEVHAQGENAHFGVIVVSDSIASLSKV
                     KQQQAVYAPLAEYFTTNAIHALTIKVFSVEKWKTERLLNMVG"
     gene            complement(2377..2700)
                     /locus_tag="PXB09_001456"
     CDS             complement(2377..2700)
                     /locus_tag="PXB09_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDL5233573.1"
                     /translation="MPQKTLQWDIQQNNESLFVKLSGELTRNTLLPLWKQRASFLSPT
                     GKQSLYWDLKEITRIDSAGFTLLAELLNHYHKIIPNSLINTPDSVRTLAALYDLDGWF
                     EQFII"
     gene            complement(2712..3347)
                     /gene="mlaC"
                     /locus_tag="PXB09_001457"
     CDS             complement(2712..3347)
                     /gene="mlaC"
                     /locus_tag="PXB09_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDL5233574.1"
                     /translation="MLKNIKKIIVTGLVAVSALFSTTAFAETSPYVLMQQTADKLFGD
                     IKANQAKIKSNPEYLRTIVRNDLMPHVHVKYAGQLVLGKNLSAATDAQKEAFFNAFGQ
                     FVEQSYAQVLTQYQDQSVQIESPKSVDGKSIVSIRVNVSGKGAAQPIKLDFKWRKNSK
                     TGEWQAYDMAAEGVSMVATKQNEWAGVIRQKGIDALIAQVAQSAKQPITLK"
     gene            complement(3393..3917)
                     /gene="mlaD"
                     /locus_tag="PXB09_001458"
     CDS             complement(3393..3917)
                     /gene="mlaD"
                     /locus_tag="PXB09_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDL5233575.1"
                     /translation="MRQSIKYEFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLY
                     ATFDNIGGLKVRAPIKVGGVVVGRVADISLDNKTYTPKVALAVNESFNQIPDTSSLSI
                     KTSGLLGEQYVALNVGFVIEGETAMMKEGDTFVDTNSAMVLEDLIGQFLYGDKKSDKT
                     EDEKASDSAEPKAE"
     gene            complement(3938..4714)
                     /gene="mlaE"
                     /locus_tag="PXB09_001459"
     CDS             complement(3938..4714)
                     /gene="mlaE"
                     /locus_tag="PXB09_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDL5233576.1"
                     /translation="MVNFISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLI
                     KQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVV
                     TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAI
                     FTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFN
                     GYDCVPTSEGISQATTRTVVNASLVILGLDFILTAIMFGG"
     gene            complement(4707..5510)
                     /gene="mlaF"
                     /locus_tag="PXB09_001460"
     CDS             complement(4707..5510)
                     /gene="mlaF"
                     /locus_tag="PXB09_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDL5233577.1"
                     /translation="MTKTENLVEVKNLTFKRGERVIYDNLNLQVQKGKVTAIMGPSGI
                     GKTTLLRLIGGQILPESGEILFDGRDICKANNKELYEIRQRMGMLFQSGALFTDISTF
                     DNVAFPIREHTRLPEELIRKLVLLKLEAVGLRGAANLMPSELSGGMARRAALARAIAL
                     DPDLIMYDEPFTGQDPISMGVIVELIKELNQALNLTSIVVSHDVKEVLSIADYAYIVA
                     DKRVIAEGTPEILQASEDPQVVQFLAGKADGPVRFHYPAKDYTEELFNG"
     gene            5735..7129
                     /locus_tag="PXB09_001461"
     CDS             5735..7129
                     /locus_tag="PXB09_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDL5233578.1"
                     /translation="MNKTMKKSFLTAFILGSTIAAMPAYAEATLPTAVNGQAVPSLAP
                     MLEKVRPAVVSIAVEGKTKGDSRRSREIPEEFEFFFGPHADLFGNRSSAPRNFRGVGS
                     GAVINAEKGYVITNNHVIDNADKITVKLEDGREFKAKLVGADPLSDVALIQVEDPKNL
                     TEIKFADSDKLQVGDFTVAIGNPFGLGQTVTSGIISALGRSTGQSDEGYENYIQTDAA
                     VNQGNSGGPLINLNGELIGINTAIISPSGGNAGIAFAIPSNMANSLVTQIIEFGEVKR
                     GMLGIKGGELNADLAKEFNISTQQGAFVSEVLPDSAAAKAGFKAGDVITEINGQKIRS
                     FSELRAKVATSGVGKEIELTYLRDGKEAKAKVTLQSDSEAKVTASNLIPALKGADFNN
                     YNAKGIKGVEISNVEKGSIAEMRSLKKGDIIIGVNRHSVENIADLRKILETKPSVVAL
                     NIVRDGANFYVILQ"
     gene            complement(7181..7942)
                     /locus_tag="PXB09_001462"
     CDS             complement(7181..7942)
                     /locus_tag="PXB09_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDL5233579.1"
                     /translation="MKTREQLSQENYQQAVKFAQHFADDVRQEFEREAEQRYQFERTQ
                     FEQSVLQNNAQNRPLAKIASLSCVAILLLAMTYYGLSGRYQVVQSGLQQHQDFQQQMS
                     DAHGTSKNERYILSLQNQLRENPNNGDLWYELGQAYALSNDFDSALVCYDNAEKLLGK
                     RAAILGAIATARYYDNGQKMTVEIQAIIEQALQLDKNENASLLLLASDSFLNNNFQQA
                     LDNWRKVLDSNNDSINRRAIIQSMEMARQMLNSQQ"
     gene            complement(7929..8381)
                     /gene="nrfF"
                     /locus_tag="PXB09_001463"
     CDS             complement(7929..8381)
                     /gene="nrfF"
                     /locus_tag="PXB09_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDL5233580.1"
                     /translation="MRNSIISIGFLQKIRKILPLVFGLLLFVGTVQAEMVDTFQFQNE
                     ADRVRAISLARSLRCLQCQNQNLVESNATAAYNMRIEVYEMVNQGKSNEEIIRIMTER
                     FGSFVNYDPPFTPQTWVLWGLPVGLFSLLFLAILWRTRKNKGNKNENA"
     gene            complement(8371..8904)
                     /locus_tag="PXB09_001464"
     CDS             complement(8371..8904)
                     /locus_tag="PXB09_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDL5233581.1"
                     /translation="MKKILLLIPLLLLVVIVGFLTVPLMNKDALAPTEDWQGKPFPEF
                     VGKNLLDSNAHLNNNSLPKEPYILNVWVSWCTWCIKEFPILLELKQKGVPIVGLTYSD
                     RPNDALNALKNWGNPFSLIIDDYEKGFLIQTLKVSSAPSSYLIDKHGVVRYQQKGYNP
                     DFAQDFLPKLEALRNEK"
     gene            complement(8901..10805)
                     /gene="nrfE"
                     /locus_tag="PXB09_001465"
     CDS             complement(8901..10805)
                     /gene="nrfE"
                     /locus_tag="PXB09_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HDL5233582.1"
                     /translation="MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTY
                     LQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLPDFFKFAATWGGHEGSMLFWLTA
                     LVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL
                     NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFL
                     TAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTI
                     LLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFGLSFIALALFAFRAN
                     LWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNS
                     VFTPLALLLMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFA
                     LQPLPTIFISLAIWIILTHLPYSQKMWQIRPLAMRLAHIGFAVCVIGAMMNSYYGDEI
                     GVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPERRYYDV
                     RTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLA
                     LFGYRRENKK"
     gene            complement(11075..12022)
                     /gene="nrfD"
                     /locus_tag="PXB09_001466"
     CDS             complement(11075..12022)
                     /gene="nrfD"
                     /locus_tag="PXB09_001466"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDL5233583.1"
                     /translation="MNEYVPFQTPNLVWDGTIAIYLFLLGISSGAVQLAIAYRNSGVK
                     MEKPSQNWIIRSAAILGTLPTIIGLLLLIFHLTKPWTFWKLMFNYNFTSVMSMGVMLF
                     QLYMAVLVVWIAIMFKDWIVRYLPVVSGLIDFAEAKLLKPIEFILFVLAAVLGAYTGF
                     LLSALVSYPMLNNPVLPALFLASGASSGIAATFLVILLAGKLSGESHEVHFMHKFEVP
                     IMVTELGLIVAFFVGLHFGGADKSLALTHALNGFWGNVFWIGVMLIGIAIPLVANIFG
                     SHRLKHNVKFIILISVFDLIGVLCLRYFILYAGQLTVAS"
     gene            complement(12022..12699)
                     /gene="nrfC"
                     /locus_tag="PXB09_001467"
     CDS             complement(12022..12699)
                     /gene="nrfC"
                     /locus_tag="PXB09_001467"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDL5233584.1"
                     /translation="MTCTRRDFVSGAGAIAVVASTGLATSITLATEKEQKKIRYAMVH
                     DETACIGCTACMDACRTTNKVPEGVSRLEIIRSEPFGEFPNVQYEFFRQSCQHCTNAP
                     CVSVCPTGASFIDPETGIIDVHSDLCVGCQYCIAVCPYRVRFIHPEKKSADKCNFCRD
                     TNLAEGKQPACVEACPTKALTFGDMNDPSSDIFHKVKNNPVYRTKTALGTEPNLYHIP
                     FGKGEHR"
     gene            complement(12699..13355)
                     /gene="nrfB"
                     /locus_tag="PXB09_001468"
     CDS             complement(12699..13355)
                     /gene="nrfB"
                     /locus_tag="PXB09_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDL5233585.1"
                     /translation="MKKLISKAGRAVALIQAVVFAGFFAISSANALMPEQPKPLWQSE
                     TADDAKVAQDARRDPNKYCTQCHESANATGKPFHHAGKHFQKDVKSPNNGEPLTCISC
                     HGNISESHRKGAKDVMRFNPHGKASNPSLERSVNEQNQVCFACHTAEKLREKFWAHDT
                     HATKIACTNCHEIHPEKDPMKDIPEKDRIKLCTDCHTKIHSGEFKNPEMKATEAKGTK
                     "
     gene            complement(13374..14876)
                     /gene="nrfA"
                     /locus_tag="PXB09_001469"
     CDS             complement(13374..14876)
                     /gene="nrfA"
                     /locus_tag="PXB09_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDL5233586.1"
                     /translation="MKFLIKSLAVATISILGCLQTALAEEAKTESLTDKAVKHEKLGV
                     KIESANHLFAEKYPLQYDSWKSTAKSTDRGSALEADPRYVILWAGYAFAKDYNKPRGH
                     FYAVTDVRDILRTGAPKDENDGPQPMACWTCKGPDVPRLIEEKGERGYFDPKWAKYGA
                     EIVNSIGCADCHDTTSEEFKQGKPALRVARPHVLRALNTVGWKFEDLDKHGKRPAVCA
                     NCHVEYYFKNKTDVTFPWDKGVDVDSIEKYYDEINFTDWTHALSKAPMLKTQHPDFEV
                     WSQGTHGKNGVTCIDCHMPKVKDKDGKVYTDHKIGNPFDQFEATCKTCHEQSKETLEK
                     RVKEYKHEVKEAMIRLEDQLVKAHFEAKAAWEAGATQEEMKEILMAIRHAQWRWDYSA
                     AGHGNHFHAPDVMLRTIATGIDRAADARAKLGVVLAKHGVTTPVAIPDISTKEKAQLA
                     IGLDIPKEQAAKDEFLKTVVPQWEKEARAKGLLPAEEADKPVAAPKAEAK"
BASE COUNT         4476 a         3394 c         2953 g         4273 t
ORIGIN      
        1 actcataagc gagaagataa tatcttctcg cttattttat tgcacaaaga tggctattat
       61 tttaggaatt gaccccggct caagggtaac aggttacggt gtgattcgcc aaaacgggcg
      121 acagctggaa tatttaggaa gtggggctat tcgaaccacg gctgaagatc tgcctacccg
      181 cttaaaacgg atttatgcag gcgtgagtga aatcatcact caatttcaac caaatatgtt
      241 cgccatagag caggtattta tggcaaaaaa ccctgattct gccttaaagc tcgggcaggc
      301 tcgaggaaca gcgattgtag cagcggttaa tcacgattta cctgtgtttg aatatgccgc
      361 ccgattagtc aaacaaaccg ttacgggaat tggttctgct gataaagtac aagtgcaaga
      421 tatggtaacc cgtatgctta aactctccgc caaaccacaa gccgatgcgg ctgatgcatt
      481 agccattgcg attacccacg ctcattcaat ccaacattca ctgattgttg ctaagcaaag
      541 ccagcagaat gtgagtagtg agaaagagca aattttagca ctaatgaaaa cccgttatag
      601 ccggggaagg tttaggttaa aaggctaact caatataaaa tgaccgcttg gaactaatgt
      661 ttcaagcggt cattttttga gaaaatttta caattactcg ccttcaaaag gagctgagaa
      721 acgttcaatt ctcgccccaa tctgacgtaa tttttcttcg atgtgttcat agccacggtc
      781 tatgtggtaa attctatcca caatcgtttc acccgttgca atacagcctg ccaacactaa
      841 gctgatggaa gcacgcaagt cagttgccat tacttctgct gattttaact gctctacacc
      901 atagcaaatt gcaatattac cttcaatttc cgctttggca cccatacgaa tcagctcagg
      961 aatatgcata aaacggtttt caaaaatcgt ttctgtaata cggcttgtgc cttctgcaac
     1021 tgtatttaat aaggtaaatt gagcttgcat atcagttggg aaacctgggt gtggcatagt
     1081 gcgaatgttc actgctttcg ggcgacgacc tagagaatca agcgtgatag tattttccgt
     1141 cacatcaacc tgcattccag cttcacgtaa tttttcgatc actgcatcaa gagtgtctgc
     1201 tttggtgtta cggcaagtaa ttcgaccacc ggaaatagcc gctgccacta aaaatgtacc
     1261 ggtttcaata cgatccggca ctacgctgtg ttcgcaaccg cctaaatgct caaccccttc
     1321 aatggtaatc atatcggtac ctgcaccaga aattttagct cccatcgcat ttaagaaatc
     1381 ggcagtatct acaatttcag gctcacgagc agcattttca ataacagtag taccttttgc
     1441 tagagtacct gccatcatca ccgataaagt tgctcctacg ctcactttat ccatatagat
     1501 tcttgcaccg tttaaacgac cgtttgaagt tgctttgaca tagccttcat caagctcgat
     1561 tttcgccccc attttttcaa gaccggaaat gtgcatatct accggtcttg ccccgatagt
     1621 acaaccgccc ggtaaagaaa cttgcccaag ttggaaccgg gcaactaatg gagctaacgc
     1681 ccaaattgaa gcacgcattg ttttcactaa ttcgtaaggt gcaacgtaat tattgatctt
     1741 actcgcatca atatgtacca cgcctttatc gctacctttt tcaaccgtta cccctaattg
     1801 gcgtaagatt ttaaaagtgg tgtccacatc ttttaaatca ggcacatttt ttaacgtaac
     1861 tgttttttca gccaaaatag cggcaaataa aatagggagt gcggcatttt tcgcacctga
     1921 aatatcgaca gtaccattta aagaaaatgg accatacaca cgaaattttt ccatttggga
     1981 gatcctaaaa aataataatt tgtaggggcg aaaaattttt cgcccaattt tccaacgttt
     2041 acaaaagagt ttgggcgaat agtgattcgc ccctacattt catctatcca accatattta
     2101 gcaaacgctc agttttccat ttttccacgc tgaatacttt aatggttaaa gcgtgaatcg
     2161 cattagtagt gaaatactca gctaaagggg cataaacagc ttgctgttgt tttacttttg
     2221 aaagagaagc aatgctgtca cttactacaa taacgccaaa gtgggcattc tcgccttgag
     2281 cgtggacttc tgttgcatca gataatgctt gttttaaaat ttcttcaatt tgtgatggat
     2341 tcattctgac ttcctaaaat atgattggta actcactcaa ataataaatt gctcaaacca
     2401 accgtctaaa tcgtataatg cagccaaagt tctgacagaa tctggcgtat taatcaaact
     2461 gtttggtatg attttatggt aatgattcag taattcagca agtaaggtaa aaccggcaga
     2521 atcaatccga gtgatttctt ttaaatccca atataggctt tgtttccctg ttggagataa
     2581 aaaagaagca cgttgcttcc ataaagggag caacgtgtta cgagttaatt cgcctgatag
     2641 tttcacaaaa agactttcgt tattttgctg aatgtcccat tgtaatgttt tttgaggcat
     2701 aactaaacta cttattttaa agtgataggc tgttttgcag attgtgccac ttgtgcaatt
     2761 aaggcatcaa tccctttttg acgaatcaca cccgcccatt cgttttgctt ggttgcaacc
     2821 atacttactc cttcagcggc catatcgtat gcttgccatt cacctgtttt gctgttttta
     2881 cgccatttaa aatctaattt gatcggctgt gcagcacctt tacctgacac gtttacacga
     2941 atgcttacga tagatttacc atccaccgat ttcgggcttt caatttgcac actttgatct
     3001 tgatactggg ttaacacctg agcataagac tgctcaacaa attgaccaaa agcattaaag
     3061 aatgcctctt tttgtgcatc agtcgcagcc gataagtttt tccctaacac taattggcct
     3121 gcatatttca cgtgaacgtg tggcattaaa tcgttacgca caatggtacg caaatattca
     3181 gggtttgatt taattttcgc ttgatttgct ttaatatcgc caaataattt atctgcggtt
     3241 tgttgcatta atacataagg gctagtttca gcaaatgcgg tggttgaaaa taatgcagaa
     3301 actgccacta agcctgttac gataattttt ttaatgtttt ttaacattat tgatgctctc
     3361 caaaactcta aattagaggt tgttgtactt aattactctg cttttggttc agcagaatca
     3421 cttgcttttt catcttcagt tttatctgac tttttatcac catataagaa ctgaccgatt
     3481 aaatcttcta acaccattgc agaattggta tctacaaaag tatcaccttc tttcatcatt
     3541 gcagtttcac cttcgattac gaagccaaca tttaacgcaa cgtattgctc gcctaataag
     3601 cctgaggttt taattgagag cgagctggta tcgggaattt gattaaaact ttcatttacc
     3661 gctaatgcca ctttcggggt gtaggttttg ttatcaagtg aaatatcagc cactcggcca
     3721 actaccacac cgccaacttt aataggcgca cgaaccttta gtccaccaat attatcaaaa
     3781 gttgcataca gggtgtaagt tttctcattt gagaagccct gcacatttgc tactcttaag
     3841 cctaaaaaga caagagctgc aagcccaagt agtacaaata agcctaccca aaattcatat
     3901 ttaattgatt gacgcattgt ctgttccttt caaaaaatca accgccgaac attatcgcag
     3961 ttaaaataaa atccaatcct aaaatcacca gtgaagcatt taccaccgtt cttgtggtcg
     4021 cttggctgat tccttctgaa gtcggtacgc aatcgtagcc gttaaataag gcaatccaga
     4081 ccaccgcaaa ggcaaaaatc acacttttaa taaagccgtt aattaaatcg ctggtattta
     4141 ccgagttttg cattaccgac caaaaactgc caccatcaac gcctttccaa tctaccccga
     4201 ctaatgagcc gccccaaatt ccgatagcgg taaaaatagc agctaacacc ggcattgaaa
     4261 tcacgcctgc ccaaaagcga ggagcgatga tacgtctaag cggatcaacc gccatcattt
     4321 caagactgga aagttgctct gtggctttca tcagcccgat ttctgcggtc aatgccgaac
     4381 cggctcgccc tgcaaataat aatgcagtaa ctacaggacc aagttctcgt aaaagcgaga
     4441 gtgaaaccaa agttcccaag ctactttcgg cggcaaaatc gaccaatacc acatagcctt
     4501 gtaagcctaa caccattccg ataaataagc ccgacagcat aataattaag agcgattgca
     4561 ctcctaacac ataaagctgt ttaatcagta acggggtatg ttttctaaat tcaggtttac
     4621 cgattaatgc tccccataac ataaaagcgg aacgccctaa tgtacggata aaattaatca
     4681 ccaccgcccc gatagagcta ataaaattaa ccattaaata gctcctccgt ataatctttt
     4741 gctggataat ggaaccgcac cggaccatca gctttaccgg ctaagaattg taccacttgc
     4801 ggatcttcgc ttgcctgtaa aatttccggt gtaccttcag caatcactcg tttatctgcc
     4861 acaatataag cataatcggc aatacttaat acttctttca catcgtgaga caccacaatg
     4921 gaggtcaaat tcaatgcctg atttaactct ttaatcagct cgacaatcac acccatacta
     4981 atcggatctt gcccggtaaa cggctcatca tacataatca gatccggatc taacgcaatc
     5041 gctcgagcaa gggcggcacg tcttgccata ccgccggaaa gttcggacgg cattaaattt
     5101 gccgcacctc gcaacccaac cgcctcgagc ttcaataaca ccaatttgcg aattagctct
     5161 tcgggtaaac gggtatgctc ccgaatcggg aaagccacat tatcgaaggt agaaatatcg
     5221 gtaaataacg cccccgattg aaacaacatc cccattcgtt ggcgaatttc atacaactct
     5281 ttgttattgg ctttgcaaat atctctgcca tcaaataaaa tttcgcccga ttcaggtaaa
     5341 atctgcccac cgattagcct caacagggtg gttttaccaa tcccagaagg ccccataatg
     5401 gcagtcactt tacctttctg cacttgcaga ttcaggttat cgtaaatcac tcgctcccct
     5461 cgcttgaagg tcaagttttt tacttcaacc aaattttccg tttttgtcat caaataggac
     5521 tcaaattaat aaaagtgata tttatggtct atcaaatttg ccagaatgtc aaaaaacttt
     5581 taataatctg acaaaaatct gcctttacaa gcggtcagat ttgctaaatt ttttgcaaac
     5641 cggctgaact gaaaaagaaa ggtcttgtct tagccaatac gagcgttttc actcgtagat
     5701 tataaaaaca taggatatga ggaacattca caatatgaac aaaacaatga aaaaatcatt
     5761 tttaactgca ttcattttag gctcaaccat tgccgcaatg ccggcgtatg cagaagcaac
     5821 attacccaca gccgtaaatg ggcaagctgt gccaagcctt gcaccaatgc tggaaaaagt
     5881 tcgcccggcg gtggtgagta ttgcagtaga aggtaaaacc aaaggcgata gccgccgcag
     5941 tcgtgaaatt ccggaagaat ttgaattttt cttcggtcct cacgccgatt tattcggcaa
     6001 ccgctcatca gctccacgca atttccgtgg cgttggatca ggtgcagtca tcaatgccga
     6061 aaaaggttat gtgattacca ataaccacgt gatcgacaat gccgataaaa ttaccgtaaa
     6121 acttgaagac ggacgtgaat ttaaagctaa attagttggt gctgatcccc tttcagatgt
     6181 ggcgttaatt caagttgaag atccaaaaaa cttaactgaa attaaattcg ccgattccga
     6241 taaattacaa gtgggcgatt ttacagttgc aatcggtaac ccgtttggct taggacaaac
     6301 tgttacttca ggcatcatct cggcacttgg tcgttcaacc ggtcaatccg atgaaggcta
     6361 tgaaaactat attcaaaccg atgcggcagt taaccaaggt aactctggcg gcccgttaat
     6421 taacttaaac ggcgaattaa tcggaattaa caccgctatt atttctccaa gtggtggcaa
     6481 tgccggtatc gcctttgcga ttccaagtaa tatggcaaac agcttggtga ctcaaattat
     6541 tgagtttggt gaagtaaaac gtggaatgtt aggcattaaa ggcggtgaat tgaatgctga
     6601 ccttgctaaa gagttcaata tttccaccca acaaggggca tttgtaagcg aagtcttacc
     6661 ggattctgct gctgctaaag ccggctttaa agcaggtgat gtgattactg aaatcaacgg
     6721 tcaaaaaatc cgtagtttca gcgaattacg agcaaaagta gctacttcag gtgtaggtaa
     6781 agagattgaa cttacttacc tgcgtgacgg caaagaagcc aaagcaaaag tgaccttaca
     6841 atcggattct gaagccaaag ttactgcttc aaacctcatt ccggcattaa aaggggcaga
     6901 ttttaacaac tacaatgcca aaggcattaa aggggttgaa atttctaacg tagaaaaagg
     6961 ctcgattgct gaaatgcgaa gcctcaaaaa aggcgatatt atcatcggcg tgaaccgcca
     7021 ctcggtagaa aacattgccg atttacgcaa aatattagaa accaagccat ctgtggttgc
     7081 actcaatatt gtgcgtgacg gtgcaaattt ctatgtgatt ttgcaataaa ccttttgatc
     7141 cactcaaaca aaagccgatg acaaaaatca tcggcttttg ttattgctgg gaatttaaca
     7201 tctgtcgtgc catttccata ctttggataa tcgctctgcg gttgatagaa tcattattgc
     7261 tatctaacac tttacgccaa ttatcgagag cttgttgaaa attgttattt aaaaagctgt
     7321 cggaggctag caggagtaaa ctggcatttt catttttatc caactgtagg gcttgctcga
     7381 taatggcttg aatttcaacg gtcattttct gcccgttatc gtaataacga gcggtggcaa
     7441 tcgcccccaa aatagccgct cgttttccga gtagcttctc ggcattatcg tagcaaacca
     7501 gtgccgaatc aaaatcattg cttaacgcat aagcctgccc tagttcgtac cataaatcac
     7561 cgttattcgg gttttctcga agctggtttt gcagactcaa aatatagcgt tcatttttcg
     7621 atgtgccgtg tgcatcgctc atctgttgtt gaaaatcttg atgttgttgc aaacctgatt
     7681 gcaccacttg ataacgtccg gaaagcccat agtaagtcat tgctaacaac aaaatcgcca
     7741 cgcaactcag gcttgcgatt ttagcaagcg gtcgattttg agcattattt tgcaaaacgc
     7801 tctgttcaaa ttgcgttcgt tcaaattggt aacgttgctc tgcctcacgc tcaaactctt
     7861 gtctgacgtc atctgcaaaa tgttgggcaa atttaaccgc ttgttggtag ttttcttggc
     7921 ttaattgctc acgcgttttc atttttgttg cctttatttt tgcgagttcg ccacaaaata
     7981 gctagaaata acaggctaaa caagccaacc ggcaagcccc ataataccca tgtctgtggc
     8041 gtgaatggtg gatcgtaatt cacaaaactg ccgaaacgct cggtcataat gcggataatt
     8101 tcctcattac ttttcccttg attcaccatt tcatacactt caattcgcat attgtaagcc
     8161 gccgtcgcat tggattcgac caaattttgg ttctgacatt gcaaacatcg caacgaacga
     8221 gccagtgaaa tcgcccgtac ccgatccgcc tcattttgaa attgaaaggt gtccaccatt
     8281 tcagcttgaa ccgtgccgac aaatagcaac aagccaaata caagcggtaa tattttgcgg
     8341 attttttgca aaaagccgat ggaaattatg ctatttctca tttctgagag cctctaattt
     8401 gggtaggaaa tcctgtgcaa aatcagggtt gtaacccttt tgttggtaac gcactacacc
     8461 gtgtttatca atcaaataac tggaaggtgc agaagagact ttcagggttt ggatcaaaaa
     8521 gcctttttcg taatcatcaa taattaaact aaacggattt ccccagtttt tcaatgcgtt
     8581 gagggcatca tttgggcggt cgctataagt taagccgaca atcggcacgc ctttttgttt
     8641 tagttccaac aaaatcggga actctttaat gcaccaagta caccagctca cccacacatt
     8701 gagaatataa ggctctttcg gcaagctgtt gttatttaaa tgcgcgttac tatcaagtaa
     8761 gttcttgcct acaaactctg gaaacggctt gccctgccaa tcttcagtgg gagcaagggc
     8821 atctttattc attaacggca cagtcaaaaa gccaacaata actacaagta acaggagcgg
     8881 aataagtaac aggatttttt tcattttttg ttttctctac gataaccgaa taatgccaac
     8941 agggcggcca ttaccatcat cataccacct aaccataagg cttgcacata aggcttatag
     9001 tgcaaacgga aggcatattc taaattgccg aacttatccc ccatcacaat ataaatatcg
     9061 tctaaattgt ggtggaaaag ccctacttct gccattgtca tcgttcttac atcataatag
     9121 cgtctttccg gtgtgacggt tgccagcaac tgttcatctc ggctgataga aaaaacggct
     9181 tgctcggcgg tgtagttcgg accgatgaga tcgtgataat cttcatattt aaaggtataa
     9241 ccggcaagtt ccgctgcttg attcggcttt aaccgcacgc cgatttcatc gccgtaataa
     9301 ctgttcatca ttgccccaat cacgcaaacc gcaaagccga tatgggctaa ccgcatcgca
     9361 agcggtcgaa tttgccacat tttttgcgaa tagggcaaat gagtgagaat aatccagatc
     9421 gcaaggctga taaatatggt gggtaacggc tgcaaagcaa aatgctctct ttgcgagatg
     9481 gaggcataaa tcaaccctaa cgctaaaccg actgcaatcg gcagcaacca aagttttacc
     9541 aatatctgct tatttgaaat ctgtttccag cccagcacca ccgcaaagcc cattactatc
     9601 attaacagta acgctagtgg cgtgaatacg ctattgaaat agggggcccc cactgaaatc
     9661 gatccccaat tcatcactgt gaagatcatc gggtagaaag tccccagcaa taccacagaa
     9721 gcagccacac taaataagcc gttaatcaat aaaaatgccg tttctttaga aagtaagttg
     9781 aaacgcactt tgccttgcca gagattcgct cggaatgcaa acagagcaag ggcaatgaaa
     9841 cttaagccga agaataagat cagcagtgcc attcctctgt cgggatcgac cgcaaaggca
     9901 tgaaccgagg tcagtacacc cgaacgaaca ataaacgtgc ctaataggct taaagcaaag
     9961 gcgaaaatgg caagtagaat cgtccaataa tagaaaatgc cacgctgttg gctcacaatt
    10021 aaactatgca ccaatgcggt gccaagtagc caaggcatta gggaggcatt ttccaccgga
    10081 tcccaaaacc accagccacc ccagccgagt tcgtaatatg cccaccacgc ccctaaaata
    10141 atgccggcgg tgagaaatcc ccacgaaatc atcgtccacg gacgaagcca acgcataatc
    10201 gcagcgtcca ttccgcctga aacgagggcg gcgacaatca ttgcaaagct caccgcaaag
    10261 ccgacatagc ccaagtagag caaaggcggg tgaaagatga gcccaatatc ttgcaacatt
    10321 gggttgagat ctcgcccttc aggtggtggt ggaaagccac gttcaaatgg gctggaaacc
    10381 aatagaatga aaagtagaaa acctagtgca attagcccta acatcgctaa ggttcggttg
    10441 gcaaacaagc ggtcaatttt ttgcgaaaat ttgcaaaata ccgcagacca aatcacaaga
    10501 gcggtgagcc aaaacagcat tgagccttcg tgtccgcccc aagtggcggc aaatttaaaa
    10561 aaatcgggga gctggctgtt ggaatgagcg gcaacgtaga taaccgaaaa atcatcggtt
    10621 agaaaagcat aagctaaggt agaaaaggaa aatgtggtaa aagcagcttg caaataagtg
    10681 aaaagcggag ccaatgccag ccaatgatat tgcttgcgaa cttcgcctag aagtgcaaaa
    10741 ccaacttgaa aaatggcact aattgcagcc aataaaagtg aaaaatagcc gagttccggt
    10801 agcataaaaa atccaaaaaa tgaccgcttg tgaatgtaaa aaaagccctc tccacttgtg
    10861 ggagagggac agatttttct tcgttcagaa gaaaaatcag ggagagggga attaaataat
    10921 tttgctaaaa ataacaatac tccctctctc tgaaaaatat ttctgaacga aatatttttc
    10981 ggtctcaata ctcgctacgc tcgctccttc ggagccgttg gcaaagccaa cgttcaaatg
    11041 taaacatttg tcccacaagg ggagagagta tatcctaact tgcaaccgtt agttgccctg
    11101 cataaaggat aaagtaacgc aagcagagta caccgattaa gtcgaaaacg gaaattaaga
    11161 taataaattt cacgttatgt ttcaagcggt ggctaccaaa aatattggca acaagcggaa
    11221 tcgcaatacc gattaacatt acgcctatcc agaacacatt cccccagaag ccgttaagtg
    11281 catgggttaa agcgagcgat ttatctgctc caccgaagtg taagcccaca aagaacgcta
    11341 caattaagcc taattcggtt accataatcg gcacttcaaa tttgtgcata aagtggactt
    11401 cgtggctttc accggataac ttgcctgcga gtaaaatcac taggaaagtt gctgcaatac
    11461 ctgacgatgc ccctgatgcc aagaacaatg ccggtaacac agggttattc agcattggat
    11521 aactcactaa cgccgagagt aagaaaccgg tgtaagcacc aagtacagca gccaatacga
    11581 ataagataaa ttcaattggt tttaacagct tcgcttcggc aaaatcgatc aaaccagaga
    11641 ccacaggtag ataccgaaca atccaatctt taaacattat ggcgatccaa accaccaata
    11701 ctgccatata aagttggaat aacattaccc ccatcgacat tactgaggta aagttatagt
    11761 tgaacattaa tttccagaat gtccaaggtt tggttaagtg gaaaatcagt aacagtaagc
    11821 cgataatggt tggtaatgtg ccaagaatag ccgcactacg aataatccag ttttggcttg
    11881 gtttttccat tttgacaccg ctattacggt aagcaatcgc taactgaacc gcacctgatg
    11941 aaataccaag taggaataag taaatagcga tagtgccatc ccaaacaagg tttggggttt
    12001 ggaaaggtac atattcattc attatctatg ttctccttta ccaaatggaa tgtgatataa
    12061 attcggctcc gtgcctaatg ccgttttggt gcgataaacc ggattatttt tcactttatg
    12121 gaaaatatcg ctacttggat cattcatatc accaaaggtt aaagctttag tcggacaagc
    12181 ctctacacaa gcaggctgtt tgccttctgc aagattggta tctcggcaaa agttacattt
    12241 atccgccgat tttttctcag ggtgaataaa acgtacacga tacgggcaaa ccgcaataca
    12301 gtattggcaa ccgacacaca aatctgagtg tacatcaata atcccggttt caggatcgat
    12361 aaatgaagca ccggtcgggc aaacactcac acaaggtgca ttggtacagt gttggcaaga
    12421 ttggcggaaa aactcatatt gtacgttcgg aaactcaccg aaaggctcac tacggataat
    12481 ttctaaacga gaaacccctt ccggcacttt gttggtggtg cgacaagcgt ccatacaagc
    12541 cgtacagccg atacaggcag tttcatcatg aaccatcgca tagcggattt tcttttgttc
    12601 tttctcagta gcaagagtta tggaggtggc aagccctgta cttgccacaa ctgcgatagc
    12661 acctgcccct gagacgaaat ctctacgggt gcaagtcatt attttgttcc ttttgcttct
    12721 gtggctttca tttcaggatt tttaaattcg cctgaatgaa ttttggtatg acaatccgta
    12781 caaagtttaa tgcgatcttt ttcaggaatg tctttcatcg gatctttttc cgggtgaatt
    12841 tcatgacagt tggtacaagc aattttagtt gcgtgcgtgt cgtgagccca gaatttttca
    12901 cgcaatttct ctgccgtatg gcaagcaaaa cagacttgat tttgctcatt taccgaacgt
    12961 tcaagtgatg ggttacttgc tttaccgtgt gggttaaaac gcattacgtc ttttgcccct
    13021 ttgcggtggc tttcagaaat attaccgtgg caacttatac aagtgagtgg ctctccatta
    13081 ttcgggcttt tcacatcttt ttggaaatgt ttgcctgcgt gatggaaagg cttacctgtt
    13141 gcgtttgccg attcgtgaca ttgagtacaa tatttatttg gatcacggcg tgcatcttga
    13201 gctacttttg catcatcagc cgtttctgat tgccaaagag gttttggctg ctcaggcatt
    13261 aacgcattcg cactggaaat tgcaaaaaaa cctgcaaata cgaccgcttg tatgagggcg
    13321 actgctcgtc ctgcttttga gattaatttt ttcatagttc acctcaagct acattatttt
    13381 gcttctgctt ttggtgctgc taccggtttg tctgcttctt ctgcgggtaa taaaccttta
    13441 gcacgagctt ctttttccca ttgaggaacc acagttttta agaactcatc ttttgctgct
    13501 tgctctttag gaatatctaa accaatagca agttgtgctt tctctttagt tgagatgtcc
    13561 ggaatcgcca ctggcgttgt tacaccgtgt ttcgctaaca ctacacctaa tttagcacgg
    13621 gcatctgctg cacggtcgat acctgttgcg atggtacgta acattacatc aggtgcgtgg
    13681 aagtggttac cgtgacctgc cgcagagtaa tcccaacgcc attgagcgtg acgaattgcc
    13741 attaagatct ctttcatctc ttcttgagtt gctccagctt cccaagcagc tttcgcttca
    13801 aagtgagctt tcactaattg atcttctaag cgaatcattg cctcttttac ttcgtgttta
    13861 tactctttta cacgtttttc caatgtttct ttgctttgtt catgacaagt tttacaagtc
    13921 gcttcaaatt ggtcaaacgg attaccgatt ttgtggtcag tataaacttt gccgtctttg
    13981 tctttcactt ttggcatatg gcaatcaata caggttacac catttttccc atgtgtacct
    14041 tgtgaccaaa cttcaaaatc tgggtgctgc gtttttagca tcggagcttt cgataaagca
    14101 tgagtccagt ctgtaaaatt gatttcatcg tagtattttt caatgctatc tacatctaca
    14161 cctttatccc aagggaaagt tacatctgtt ttatttttga aatagtactc cacatggcag
    14221 ttagcgcaca cagcagggcg tttaccatgt ttatctaaat cctcaaactt ccaaccaacc
    14281 gtattcaatg cacgtaatac gtgaggacgt gcaacacgta gtgcaggttt accttgttta
    14341 aactcttctg atgtcgtgtc atggcagtct gcacaaccta ttgagtttac aatttcagca
    14401 ccatatttcg cccatttagg atcaaaatat cctcgctcac ctttctcctc aattaagcgt
    14461 ggaacatcag ggcctttaca tgtccaacaa gccataggtt gtggaccatc attttcatct
    14521 ttaggcgcgc cggtgcgcaa aatatcacgc acatcggtaa ctgcataaaa gtgacctcgt
    14581 ggtttattat aatctttcgc aaaagcatag cctgcccaca aaataacata acgagggtca
    14641 gcctctaacg cacttcctcg atctgtggat tttgcagttg acttccaaga atcgtattgt
    14701 agcggatatt tttctgcaaa taggtggttt gcagactcaa ttttcacgcc taatttttca
    14761 tgcttaactg ctttatctgt taatgattca gttttcgcct cttcagctaa agcagtttgt
    14821 aaacacccca atattgaaat tgttgccaca gctaggcttt ttattaaaaa tttcattttg
    14881 gctctcccaa tcaggtaaaa ataattagag aaaaataaga atttttccta ttaaaattaa
    14941 taagataatc cctgatattc agttgcgaga atatgaaatt taaaccaagc cgactatatc
    15001 aaaatgaaga tttattgaat taaatcaata aaatttgcca aaatacctct taagtagtaa
    15061 ttcctttctc tacctaaata aaaacgactt ttattt
//
LOCUS       DANLTI010000062        15039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.062, whole genome shotgun sequence.
ACCESSION   DANLTI010000062 DANLTI010000000
VERSION     DANLTI010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.062"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(184..1485)
                     /locus_tag="PXB09_001470"
     CDS             complement(184..1485)
                     /locus_tag="PXB09_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5233587.1"
                     /translation="MWVRLGDICLKITDGTHHSPPNIDKSDFLYITAKNIKKDGLDLS
                     KISYVTKEIHNEIFSRCNPEKGDILYIKDGATTGVSIINTLNEPFSMLSSVALIKTSQ
                     EIDNEYLNYVMNSHYFYNISIGSMSGTGIPRITLTKLESYLVPVPPLLEQQRIVQKIE
                     ELLPLVERYEQTEQQLTKLNNTFPEQLKKSVLHAAIQGKLTEQDPNDELASCLIERIK
                     AEKNRLIAEKKLKKPKSVSEIVMRDNLPYEIKAGQERCIADEVPFEIPQNWTWVRLGE
                     VGDWSSGATPNRHNPEYYNGTIPWLKTGDLNNGIISSIPEFITDKALQECSVRLNPVG
                     SVLIAMYGATIGKLGILKIAATTNQACCACIPFNGIYNKFLFYYLMSQKAEFQKKSEG
                     SGQPNISKEKIINYLFPLPPIHEQHRIVQKIEQLFAEIEKL"
     gene            1663..3771
                     /gene="gshAB"
                     /locus_tag="PXB09_001471"
     CDS             1663..3771
                     /gene="gshAB"
                     /locus_tag="PXB09_001471"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HDL5233588.1"
                     /translation="MKLQKLIRENHLALLFQQGNFGLEKESQRVDRNGNIVTTPHPAV
                     FGNRSYHPYIQTDFAESQLELITPPNAKLEDSFRWLSAIHEVVLRSLPEEEYIFPLSM
                     PAGLPPEEQIQEAQFDNPEDVQYRQHLSKNYGKYKQMVSGVHYNFQLSTEFVEKAFAL
                     QTEYSELKAFQNALYMKLANNFLRYQWILLYLLAATPTVESQYFYEKSPLARGQLVRS
                     LRSSPYGYVNSEKVVVNHDSLESYVESLEANVANGLLIAEKEFYSNVRLRGGKKAREL
                     LENGVKYAEFRLFDLNPFAPYGIELNDAKFIHYFLLGMLWLEETSGQKEVEIGKRKLY
                     QVALEDPRTETAFRAEGEAILNQLLAMLEELSAGQESLDLVREKLAQFADPSKTLNGR
                     LIAAIEEVGSYKALGAKLAQTYKAQAFERFYALSAFDNMELSTQALFFDLIQQGIEVE
                     VLDENDQFLALKFGDHLEYVKNGNMTSRDQYISPLIMENKVVTKKVLAKAGFNVPKSV
                     EFTNLEQAVAHYPLFEGKAVVIKPKSTNYGLGITIFQQAVKNREDFAKAVEIAFREDK
                     EVMVEDYLVGTEYRFFVLGDETLAVLLRVPAKGQTVQLRANSNISTGGDSIDMTDQMH
                     ESYRQIAVGIAQAMGAKVCGVDLIIPDLTKPAEPNLSSWGVIEANFNPMMMMHIFPYQ
                     GKSRRLTKAVIKMLFPEIGN"
     gene            4093..5070
                     /gene="manX"
                     /locus_tag="PXB09_001472"
     CDS             4093..5070
                     /gene="manX"
                     /locus_tag="PXB09_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDL5233589.1"
                     /translation="MSIAIIIATHGVAAEQLLKTTEMLIGEQEDVAYIDFVPGENAET
                     IMGKYQALVEGPLSHCDQVLFLVDMWGGSPFNAANRFQDGKSGMDVVAGVNIPMLVNT
                     CMARDDVESLEELVEVALEAGSTGIRSLNHQPEVAEVQTATPAQETAAVQQPEIVDDG
                     RRMTIALARIDDRLIHGQVATVWTKESKVNRIIVVNEGVAKDSVRTTMLKSVAPLGVT
                     AHVVDVPKMIRVYNNPEYADDRVMLLFTNPSDVLALIEGGVPLNSINVGGISHKEGKQ
                     MVSHSVAVDQNDIDAFKAIDAKGVELEVRKVSSDSRQYMMDLLKKHNLI"
     gene            5082..5882
                     /locus_tag="PXB09_001473"
     CDS             5082..5882
                     /locus_tag="PXB09_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HDL5233590.1"
                     /translation="MELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLG
                     DVTTGVIVGGSLELLALGWMNIGAAVAPDAALASIVSTILVIVGRQDISTGIAIAIPL
                     AAAGQVLTYVVRAITVGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIPALIVAL
                     TAGTDAVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAG
                     FTDFNLVALGVLGTVIAMVYIHMHPKYNKSQQVVVAAAPKNDLDNRLD"
     gene            5896..6732
                     /locus_tag="PXB09_001474"
     CDS             5896..6732
                     /locus_tag="PXB09_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDL5233591.1"
                     /translation="MTTEIKKVTKSDLNAVVRRSNLFQGSWNFERMQALGFAYAMVPV
                     IKRLYPDPNGPGRKEAIKRHSEFFNTQPFVGAPILGVTIAMEEERANGKEIDNAAING
                     IKVGLMGPLAGVGDPIFWGTVRPVFAALGAGLALKGELLGPILFFALFNIVRLAARYY
                     GVVYGYKKGLDVVQDMSGGLLQKLTEGASILGLFIMGALVQKWTSINVPLVLSTIQKQ
                     DGTIEVTTVQSILDSLMPGLLPLLLTFACMWLLRNRVNAIWIILGFFVIGILGAATGA
                     LA"
     gene            6825..7310
                     /locus_tag="PXB09_001475"
     CDS             6825..7310
                     /locus_tag="PXB09_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDL5233592.1"
                     /translation="MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTID
                     TWLLIGLIVLSISYGVQNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANV
                     FFNYDKIYQVNIAEGKADEKILVIDLHSGRRLLAYVENAEDLQPVVDFFGGYKKESEQ
                     K"
     gene            complement(7396..8187)
                     /gene="tpiA"
                     /locus_tag="PXB09_001476"
     CDS             complement(7396..8187)
                     /gene="tpiA"
                     /locus_tag="PXB09_001476"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDL5233593.1"
                     /translation="MARRPLVMGNWKLNGDKAFTKTLIADLKAELHGVEGCDVAIAPP
                     VMYLAHAEASLAGCGCGCSDKGLIALGSQNVDVNVKGAFTGDISPEMLKEFGAKYIII
                     GHSERRTYHKESDEFIAQKFKVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVI
                     NAHGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHIAAKSQAVADQVIIQY
                     GGSVNDANAAELFTQPDIDGALVGGVSLKAPAFAVIVKAAAAAKA"
     gene            8347..9261
                     /locus_tag="PXB09_001477"
     CDS             8347..9261
                     /locus_tag="PXB09_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDL5233594.1"
                     /translation="MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKI
                     RKTNASTLFVGEKLAKFVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAES
                     EELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAAR
                     SEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTA
                     PLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGL
                     RLKFFLDSGSYATALVRELILLTEESEA"
     gene            9432..10220
                     /gene="surE"
                     /locus_tag="PXB09_001478"
     CDS             9432..10220
                     /gene="surE"
                     /locus_tag="PXB09_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDL5233595.1"
                     /translation="MRILISNDDGFHAVGIQTLAKALRDAGHIVTIIAPDRNRSAASS
                     CLTLVDPLRVHRFDEYNYAVIAGTPADCVHLALNGLFDGKFAEKFDLVVSGINHGANL
                     GDDVVYSGTVAAALEGRHLPLPSIAVSLVGRKHSSFLDGENHFGTAAQVVLDLLEKME
                     TQRFPSNHVLNVNVPNLPYSELKGTMITRLGERSPAAEIVKQKDPRNADVYWIGVTGE
                     PLDESFGTDFYALNRDCVSITPIQVDMTAHKTIATLKGIFNETV"
     gene            10207..10791
                     /locus_tag="PXB09_001479"
     CDS             10207..10791
                     /locus_tag="PXB09_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5233596.1"
                     /translation="MKLFETIYDKTMQWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLI
                     PMSMAKPQNAFKYAVYTTLASVAGGVIGYFIGLYATDWVQGVIANWGMQANFDKAKLW
                     FETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFILVAKLSAWG
                     GKKYEQKIRRSIELIGWGTIVLAVVAYIIYTLMK"
     gene            10809..11309
                     /locus_tag="PXB09_001480"
     CDS             10809..11309
                     /locus_tag="PXB09_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDL5233597.1"
                     /translation="MKKSLFVLSLISFALVGCSSNSGESTSAVETTEANATWQSADSI
                     QTAPMPASMNQPIATQPTYQQPTYSAPQPISAAPAPMPVSSGSDSSQVETVGNCQVVR
                     DANNAPIYSQITKGCYTESHYTVGKSDTLYLIGYLTGTNANQIAQLNGLNTGSPLKVG
                     QVLRVR"
     gene            11322..11522
                     /locus_tag="PXB09_001481"
     CDS             11322..11522
                     /locus_tag="PXB09_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233598.1"
                     /translation="MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAGTLQPIEGSG
                     ASQDSYSWPSDIQSTSMPDSMK"
     gene            11541..12821
                     /locus_tag="PXB09_001482"
     CDS             11541..12821
                     /locus_tag="PXB09_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5233599.1"
                     /translation="MKKQFILLPLVSAVLAACSSNNPAPVVNASGNNELSPGVMQPVD
                     VSAGAINSSGGWQSDIQSAPMPSSMNTTPVQTMPQPVSVPQPVATVPQPITNPVITEQ
                     PPQPTTTTKIVKKTKTVEKKVDQNFEIPRDANNAPMYNQIQKGFYDGSTYTVRKGDTM
                     FLIAYIVGKDVKEIAALNNMSEPYQLSVGQKLKTGKSATETITVEEKVTVPVEPQITY
                     QQGANGTTYASGGNITGPVKAGTANADVTPVNNGIKATTATAPAVTASVGTVNATEDR
                     TASTIRAIDGTASGAVQSSNTVSAPASSIKWQWPTSGRVISGFSSAEGGNKGIDIAGN
                     KGQDVRAAAAGKVVYAGNALQGYGNLIIIKHTDDFLSAYAHNNTIEVDEQETVKAGQK
                     IATLGSTGTNTNKLHFEIRYKGKSVDPARYLPRK"
     gene            13062..13253
                     /locus_tag="PXB09_001483"
     CDS             13062..13253
                     /locus_tag="PXB09_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233600.1"
                     /translation="MDPTEPSHRIYILLSEDRFQAEVFSTKLSESSMLLEAVKGGYIS
                     KDGKVRLLKKAEGWKIYYE"
     gene            13246..13812
                     /locus_tag="PXB09_001484"
     CDS             13246..13812
                     /locus_tag="PXB09_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDL5233601.1"
                     /translation="MSETKIRCDWCKSSEIYMKYHDEEWGKPEFDSLKLFEKICLEGQ
                     QAGLSWITVLKKREAYRQAFHQFNPEKIAKMGEEEIDLLMQNTSLIHHRAKLEAIIKN
                     AKAYITMQQNGEDFSRFIWSFVNYQPQINDVPTLEAVPAHTETSKAMSKALKKRGFVF
                     VGETTCYAFMQSMGLVNDHLNNCVFKHK"
     gene            complement(13859..14089)
                     /gene="acpP"
                     /locus_tag="PXB09_001485"
     CDS             complement(13859..14089)
                     /gene="acpP"
                     /locus_tag="PXB09_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDL5233602.1"
                     /translation="MSIEERVKKIIVDQLGAKAEDVKPEASFIEDLGADSLDTVELVM
                     ALEEEFDIEIPDEEAEKITTVQSAIDYVQNNQ"
     gene            complement(14276..14953)
                     /gene="rpe"
                     /locus_tag="PXB09_001486"
     CDS             complement(14276..14953)
                     /gene="rpe"
                     /locus_tag="PXB09_001486"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDL5233603.1"
                     /translation="MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHY
                     VPNLTFGPAICKALRDYGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHID
                     RNLQLIRDLGCKSGLVFNPATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKL
                     KEVRRRIDESGYNIRLEVDGGVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMR
                     DELRKVG"
BASE COUNT         4451 a         3070 c         3084 g         4434 t
ORIGIN      
        1 ttttaccgca aaaagataag ctgattgggt attttcagca agattagatt gattaaggtg
       61 cttttcaaat agatggatca tataggtttc cttttaggtt ggttgaaaac cgatatgata
      121 aaagatcaat aatttagtga ctgtagggcg tatccaacac gcccaagaaa gcgatgatga
      181 ctcctacaat ttttcaatct ctgcaaataa ttgttcaatt ttttgaacaa tgcgatgttg
      241 ttcgtggatt ggtggtaaag gaaataaata attgataatt ttttcctttg atatatttgg
      301 ttgcccactt ccctcacttt ttttctgaaa ttctgctttc tgcgacatca aataataaaa
      361 taagaattta ttataaattc cattaaaagg aatacacgca cagcaagcct gatttgttgt
      421 tgctgctatt tttaatatcc caagcttacc aattgtcgct ccatacattg ctatcaaaac
      481 tgaaccaaca ggatttaatc ttacagaaca ttcctgcaat gctttatctg taataaattc
      541 aggtatagat gaaattattc cgttgtttaa gtctcctgtt tttagccacg ggatcgtacc
      601 attatagtat tcaggattgt gtcggtttgg agttgcacct gaactccaat cacctacttc
      661 ccccaacctc acccaagtcc aattttgagg aatctcaaat ggcacttcat cggcgataca
      721 ccgttcctga cctgctttga tctcataagg taaattatca cgcattacaa tctctgaaac
      781 actttttggt tttttgagtt ttttctcggc aataagacga tttttctccg cttttatccg
      841 ctcaatcagg caagatgcca gttcatcatt cggatcttgc tcggttaatt taccctgaat
      901 agctgcgtgt aacaccgatt ttttcagctg ttcggggaat gtattgttga gtttagtgag
      961 ttgctgttcg gtttgctcgt agcgttcaac aagcggtaat aattcctcga ttttttgcac
     1021 aatgcgctgt tgttctagga gtggcggaac tgggactaaa taagattcta atttagttaa
     1081 tgttattctt ggaatacctg ttccagacat acttccaata gaaatgttat aaaaataatg
     1141 actattcatt acataattta agtactcatt atctatttct tgtgaggtct taattaaggc
     1201 aacactggat aacatactaa atggctcatt aagagtattt ataatactta ctccagttgt
     1261 ggctccatct ttaatatata gaatatctcc cttttcagga ttacaacggc tgaaaatttc
     1321 attatgaatt tcttttgtta catagctaat ttttgataaa tctaatccat ctttctttat
     1381 atttttagct gtaatataaa gaaaatcact cttatcgata tttgggggag aatgatgagt
     1441 tccatctgta atttttaggc atatatcccc caacctcacc cacacccaac tctcaggaat
     1501 ctcaaaaggt ggttcaatgg tataaggggc tttatccgaa gcagtatttc tgttataacc
     1561 aaatcatcta cttcattcca ataaactaaa acccactatt tcactaagtc tttcatttgt
     1621 gttattgtgc cgatacattt ttttgactac aaaggataga tgatgaaact acaaaaactt
     1681 atccgagaaa atcatttagc attgctgttt caacaaggga attttgggct tgagaaagag
     1741 agccaacggg ttgatcgcaa cggcaatatc gttactactc cccaccctgc cgtattcggt
     1801 aatcgctctt accaccctta tattcaaacc gattttgccg aaagtcagct agagttaatc
     1861 actcccccga atgctaaatt agaagacagt tttcgttggc tctctgctat tcacgaagtg
     1921 gtattgcgtt cgttgccaga ggaggaatat atcttccctc tcagtatgcc ggcaggcttg
     1981 ccgccggaag agcaaattca agaagcacaa tttgacaacc ctgaagatgt gcaatatcgc
     2041 caacaccttt ccaaaaacta tgggaaatat aagcaaatgg taagcggcgt gcattataat
     2101 tttcaacttt caacggaatt tgtcgaaaaa gcctttgctt tacaaacgga atatagcgag
     2161 ctgaaagcct tccaaaacgc actttatatg aagttagcta ataacttttt gcgttatcaa
     2221 tggattttgc tctatttatt ggctgccacg cctacggtgg aatcgcaata tttttatgaa
     2281 aaatcaccgc ttgcgagagg gcaacttgtc cgcagcttgc gttcaagccc ttatggttat
     2341 gtgaattcgg aaaaagtggt ggttaatcac gacagcttag aaagctatgt tgaaagcctt
     2401 gaagccaatg ttgccaacgg attattaatt gccgaaaaag aattctattc caatgtgcgt
     2461 ttacgagggg gcaaaaaagc ccgtgagcta ttggaaaacg gtgtgaaata cgccgaattc
     2521 cgtttatttg atttaaaccc tttcgcccct tacggcattg agctgaatga tgccaaattt
     2581 atccattatt tcttactcgg tatgctttgg ctggaggaaa caagcggtca aaaagaggtc
     2641 gaaatcggca aacggaaact ttaccaagtc gcacttgaag atccaagaac agaaaccgct
     2701 ttccgtgccg aaggtgaagc cattttaaat caacttttag cgatgcttga agaattatct
     2761 gccggtcagg aaagcctaga tttggtgcgg gaaaaattag ctcaatttgc tgatccaagc
     2821 aaaaccctga acggacgttt aattgccgca atagaggaag tcggcagtta taaagcattg
     2881 ggggctaaat tggctcaaac ctataaggca caagcctttg agcgttttta tgcgttatcg
     2941 gcatttgata atatggaact ttccactcaa gccctgtttt ttgatttgat ccaacaaggg
     3001 attgaggtgg aagtactgga cgaaaacgat caattcctcg ccctaaaatt tggcgatcat
     3061 ttggaatatg tgaaaaacgg caatatgacc agccgagatc aatacatttc accgctgatt
     3121 atggaaaaca aagtggtgac gaaaaaagta ttggcaaaag ccggctttaa cgtgccgaaa
     3181 agcgttgaat ttaccaacct tgaacaggct gtggcacatt atccgctatt tgaaggcaaa
     3241 gcggtggtga ttaagccgaa atcgactaac tatggtttag ggattaccat cttccaacaa
     3301 gcggtcaaaa atcgagaaga ttttgcaaaa gcggttgaaa ttgcgttccg tgaagacaaa
     3361 gaggtgatgg tggaagacta tttagtcggt actgaatacc gcttctttgt actgggcgat
     3421 gaaacccttg cggtgttact gcgtgtaccg gcgaaaggtc aaacagttca actgcgtgcc
     3481 aattccaaca tcagcaccgg cggcgattcg attgatatga ccgaccaaat gcacgaaagc
     3541 tatagacaaa ttgcagtggg aattgctcag gcaatggggg ctaaagtgtg tggggtggat
     3601 ttgatcattc ctgatctcac caaacctgcc gagccaaatt taagctcttg gggcgtcatt
     3661 gaggcaaact tcaacccaat gatgatgatg cacattttcc cttaccaagg caaatcccgc
     3721 cgtttaacca aagcggtaat caaaatgctg tttcctgaga taggcaatta aattttctct
     3781 ctatacctct tttaaggaga atttactcaa gaattctcct taatttattt ctaaagtttt
     3841 actccaatta aatttcactt tgtgcaaaac actccaaaag aagaattttt ttgtataagt
     3901 aaaaacgatc gaaaatatct ccgttaacaa aatgttataa agaaaagaca tttagcccaa
     3961 tttatagcca aaaaagctta ttgtctgtga tatagatcac acttttgtaa ttaatacatt
     4021 gtgtgaaata attatcatat taaaatctcg ccccagtaaa taaacaactt aaaaaaccgc
     4081 aaggagtaac aaatgagcat tgctattatc atagcaaccc atggtgttgc tgcagagcaa
     4141 cttctcaaaa caactgagat gttgattggt gaacaagaag atgttgctta cattgacttt
     4201 gttcccggcg aaaatgcaga aacgattatg ggcaaatatc aagcattggt tgaaggtcca
     4261 ctatcacact gtgatcaagt gctgtttttg gtggatatgt ggggaggaag cccattcaac
     4321 gccgcaaacc gattccaaga tggaaaatcg ggtatggatg ttgttgcggg tgtgaatatt
     4381 cctatgttag tgaacacctg tatggctcgt gatgatgtgg agtcgttgga agaattggtg
     4441 gaagtcgcat tagaagccgg ctcaaccggg attcgttcac ttaatcacca acctgaagtg
     4501 gctgaggtgc aaaccgctac tcctgcacaa gaaactgcag ctgttcaaca gcctgaaatt
     4561 gttgatgacg gacgtcgtat gaccattgcc cttgcccgta ttgatgaccg cttgattcac
     4621 ggtcaagttg cgacggtttg gacaaaagaa agtaaagtca atcgcattat tgtggtaaac
     4681 gaaggtgtag caaaagatag tgtacgaact actatgctaa aaagtgttgc tcctcttggc
     4741 gtaacggctc acgttgttga tgtacctaaa atgattcgtg tctataacaa ccctgaatat
     4801 gccgatgatc gtgtaatgtt actctttacc aacccaagtg atgtcttagc cttaattgaa
     4861 ggcggtgtac cactcaatag cattaacgtg ggcggtattt cgcataaaga agggaaacaa
     4921 atggttagcc attctgtggc ggttgatcaa aatgatattg atgccttcaa agcaattgat
     4981 gcgaaaggcg ttgaattaga agtacgcaaa gtctcaagcg atagccgtca gtatatgatg
     5041 gatttattga aaaaacataa cttaatctaa aggaaattac tatggaactt tcagcattac
     5101 aaattgtgct tttattcctc gttgcctgta tctcaggtat gggctcaatt cttgatgaat
     5161 ggcaaaccca ccgtccgtta attgcctgta cgatgatagg cttagtgctt ggtgatgtga
     5221 ctaccggcgt tattgttggt ggctcattag agttattagc tttaggttgg atgaacatcg
     5281 gtgccgctgt tgcaccagat gcggcattag cctctattgt ctcaaccatt ttagtcattg
     5341 taggtcgtca agatatttca actggtatcg ccatcgctat tccgcttgca gctgccggtc
     5401 aagtattaac ctatgttgtg cgtgcaatca ccgtaggttt ccaacacgca gcagataaat
     5461 caattgaaga cggtaactta agccgtttag actggttaca tcgtggtgct ttattgcttc
     5521 aagcaatgcg tattgccatt ccggcattaa ttgtggcatt aacagcaggt acagatgcgg
     5581 ttcaaacaat gttaaatgcc attcctgaag tggttacaac cgggctgaaa attgccggtg
     5641 gcttcatcgc cgtggtgggt tatgcgatgg tgatcaatat gatgcgtgca ggtcatttaa
     5701 tgccgttctt cttcgcaggc tttgtaattg caggctttac cgatttcaat cttgttgccc
     5761 ttggggtatt aggtacggtt attgcaatgg tttatatcca tatgcaccct aaatataaca
     5821 aaagccaaca ggtagtggtg gcagctgcac caaaaaatga tttagacaac cgtttagact
     5881 aagagggcat ttaaaatgac aactgaaatc aaaaaagtaa caaaaagcga tttgaatgcc
     5941 gttgtacgtc gttcaaactt attccaaggt tcgtggaact ttgagcgtat gcaggctctt
     6001 ggttttgcgt atgcgatggt accggttatc aaacgtttat atccggatcc aaatggcccg
     6061 ggtcgcaaag aagcaattaa acgccattct gagttcttta acacccagcc attcgtcggt
     6121 gcaccgattt taggggtaac cattgctatg gaagaagaac gtgccaacgg taaagaaatc
     6181 gacaatgccg caattaacgg tattaaagtt ggtttaatgg gaccattagc cggtgtgggt
     6241 gacccaattt tctggggaac tgttcgccct gtatttgccg cattaggagc aggcttagcc
     6301 ttaaaaggtg agcttttagg cccaatcctg tttttcgcct tatttaacat agtgcgttta
     6361 gccgcacgct attatggcgt agtgtatggc tataaaaaag ggttagatgt tgtacaagat
     6421 atgagcggcg gtttattgca aaaattaacc gaaggtgctt caatcttagg tctgtttatt
     6481 atgggggcat tggtacaaaa atggacgagc attaacgttc cgcttgtgct ttcaaccatt
     6541 caaaaacaag acggtaccat cgaagttacc acagtgcaaa gcattctcga cagcttaatg
     6601 ccgggcctac tcccattatt attaaccttt gcttgtatgt ggttacttcg taatcgagta
     6661 aatgctatct ggattatcct cggtttcttt gttatcggta tcctcggcgc tgcaaccggt
     6721 gcattagctt aattgcaaaa ttttctgtga aaacgaccgc ttgaacttga acattcaagc
     6781 ggttttttat acgctttagc ccaaataaat tcacttgctt aattatgacc aataccatcc
     6841 ttattctctt tattttactt ggcttagtat tcgccattta tgaccaagtt tttatgcaca
     6901 aactcaaagg cacaacctta ctggaaatcc gtttaaaaaa gcaaaaaaca attgatactt
     6961 ggttattgat tggtttaatc gtcttgtcaa ttagctatgg cgtacaaaat caaatccagc
     7021 cttttacact ttacctgctg gcgacttgca ttattctgtc ggtctatctc gcctttttcc
     7081 gttcccctcg cttgttgtta aaacagcacg gttttttctt tgcgaatgtc ttttttaatt
     7141 acgacaagat ttatcaagtc aatattgcag aaggaaaagc agacgaaaaa attttggtaa
     7201 ttgatttaca tagcggaaga aggctgcttg cctatgttga aaatgcggaa gatcttcaac
     7261 cggtagtgga tttttttggc ggttataaaa aggaaagtga gcagaaatag tttgcgaaca
     7321 aaacacaagc ggtcattttt ccctgaaatt ttgcaaaaaa ctgaggaaaa atgaccgctt
     7381 gtaaaatcgg ttaaattagg ctttagcagc cgctgccgct ttaacgatca ccgcaaaagc
     7441 aggcgcttta agtgaaacac cgcctactaa tgcaccgtca atatccggtt gagtgaataa
     7501 ctctgctgca ttggcatcgt ttacagagcc accgtattga atgatcactt ggtcagccac
     7561 tgcttgcgat ttagctgcaa tatggtcacg aataaattta tgcactgctt gtgcttgtgc
     7621 cggagtcgct gatttgccgg taccgattgc ccaaattggt tcgtaagcaa taactgcacc
     7681 gttgaatgct tccacaccgt gcgcgttgat gaccgcatca atttgtcttg cacacacttc
     7741 ttcagtttta cctgcttcat tttcggcttc agattcaccg atacataata caggcactaa
     7801 gccggcatct tttaatactt tgaatttttg agcaataaat tcatcgcttt ctttgtggta
     7861 agtacggcgt tctgaatgcc cgataataat atattttgcc ccaaactctt ttaacatttc
     7921 aggtgaaata tcaccggtga atgccccttt tacgttcaca tcaacgtttt gtgaaccaag
     7981 tgcgattaag cctttatcac tgcaaccaca gccacaaccg gcaagtgatg cttcagcgtg
     8041 tgccaaatac atcaccggtg gagcgattgc tacatcacag ccttcaacgc catgtaattc
     8101 tgcttttaaa tctgcaatta aggttttagt aaacgcttta tcaccgttta atttccagtt
     8161 acccattaca agtggacgac gtgccatttt gtttctccta tatgaagttg aacttaaata
     8221 taaacgttgc aaactatacc aaattttaat gtcgttttgt tgtttttatt ttgctttttc
     8281 tgatctagat cgaaaggttt aacgtataat gccgaaatct tattttttat gttattcgag
     8341 aagtgaatga aactgaatta tttatactct cctcctcaag ctgttgggcg actaaaagcc
     8401 gaatatgcag actttattgt gcgtgaagaa ctgggctacg aactagccgg cgaaggggaa
     8461 tttgtggcgg ttaaaatccg caaaaccaac gccagcacgc tgtttgtggg ggaaaagtta
     8521 gccaaatttg tcggtatttc cgagcgtgaa atgagttatg caggcttaaa ggaccgccac
     8581 aaccgcaaaa ttcgtgttgg ttcgctcgcc ggcaatcatt ttgaattatt gctacgtgat
     8641 gtagcagaaa gcgaagagtt gatttaccgt ttgcaacagt tgcaagcggt cggatttccc
     8701 aattatttta ccgaacaacg tttcgggcga gacggacata acctgactca agccttgcgt
     8761 tgggcaaacg gggaaattag cgtgaaagat cgcaaaaaac gcagtttcta cctttccgct
     8821 gcccgctcgg aagtgtttaa tttagtggtt tcacagcgga ttaatgactg cttaacccaa
     8881 aaaatcttgg agaatgatta cgttcaactt gccggctcta acagcttttt ctgcgtgaaa
     8941 tcggacgaaa ttgctgaaac tcaagcccgt ttagcacagc aagatctact tctcaccgct
     9001 ccgctgatag gcgaaagatc gcttgaatta gaatgcaatc ctgctgaaaa agccatcata
     9061 gagcaacacg ctcaattggt tgccttaatg caaaaagagc gtatggcagc cgctcggcga
     9121 gcaatgcttt gtaagccaca aaatctggaa tggcaatttg aacaagaagg gctacggtta
     9181 aaattctttt tagattcagg cagttatgcc actgcactgg tgcgagagtt aattctgctt
     9241 accgaagaga gcgaagctta gtccataaca cataacaagc ggtaagattt taatcatttt
     9301 ttgcaatttg caaaacttta acaaaatctt accgcttttt gcacttttag actaaaaaaa
     9361 ctgtcgaaaa attgttagaa ttgcgatctt tgtatttaga gtctatcaag atgtaagatc
     9421 taaaggaaat tatgcgaatt ttaattagta atgacgatgg ttttcacgct gtcggcattc
     9481 aaactttagc caaagccttg cgagatgcag gccatatcgt caccattatt gcaccggatc
     9541 gtaaccgcag tgcagcttca agctgcctaa ccttagtaga tccacttcgg gtgcatcgtt
     9601 ttgatgaata taattatgcg gtgatcgccg gcacacctgc cgattgcgtg catttagcct
     9661 taaacggctt gtttgacggc aaatttgcag aaaaatttga tttggtggtc tccggcatta
     9721 atcacggggc aaatttaggc gatgatgtgg tttactccgg tacggtagcg gcagcattgg
     9781 aaggccgcca cttgccatta ccaagtattg cagtatcact ggttgggcgt aaacactctt
     9841 cgtttttaga cggtgaaaat cattttggaa cggcagcaca ggtagtgtta gatttattgg
     9901 aaaaaatgga aacgcaacgt tttccatcaa accacgttct caatgttaat gtgccgaatt
     9961 taccttattc agagctaaaa ggcacaatga tcacccgctt aggtgaacgt tcacccgctg
    10021 cggaaattgt gaagcaaaaa gatcctcgta atgctgatgt ctattggatt ggtgtaacag
    10081 gtgaaccact ggatgaaagt tttggtactg atttttatgc attaaaccga gattgcgttt
    10141 ctatcacacc aattcaagtg gatatgaccg ctcataaaac gatagcaacc ttaaaaggca
    10201 tttttaatga aactgtttga aacaatttat gacaaaacaa tgcagtggtc taagcaccgc
    10261 ttcgctgcct tttggttgag ttttgtcagt tttatcgagg cgatcttttt cccgattccg
    10321 ccggatgtga tgttgattcc gatgtcgatg gcaaaaccgc aaaatgcgtt taaatatgca
    10381 gtttacacta cccttgcttc ggttgccggt ggtgttattg gttattttat tggcttatat
    10441 gctaccgatt gggtgcaagg cgtcatcgca aattggggaa tgcaagcaaa ctttgataaa
    10501 gcaaaattgt ggtttgaaac ttggggtgtc gcggtagtat ttttagccgg tttttcgccg
    10561 attccctata aggtatttac catctgtgcc ggtgtaatgc agatggcgtt cttcccgttt
    10621 gtgattactg ctgcgatttc tcgctttgcc cgttttattt tggtagcaaa actctctgct
    10681 tggggtggca aaaaatatga acaaaaaatt cgccgctcaa ttgaattaat tggttgggga
    10741 acaatcgttt tagccgttgt tgcctatata atttatacat taatgaaata aattttaagg
    10801 atataaaaat gaaaaaatca ctttttgttt tatctctgat ttcttttgct ttagtgggtt
    10861 gttcaagcaa ttcgggtgaa tccacttctg cggtagaaac aacagaagca aatgcaactt
    10921 ggcaatcagc agatagcatt caaactgcac caatgcctgc ctcgatgaat caacctattg
    10981 ccactcagcc aacctatcag cagccgactt actctgcacc acaaccaatt tcggcagcac
    11041 cagcaccaat gcctgtttca agtggtagtg atagctctca agttgaaaca gtagggaact
    11101 gccaagtggt gcgtgatgcg aataatgctc ctatctattc acaaattacc aaaggctgct
    11161 acacagaaag tcactatacg gtaggtaaaa gtgatacgct ttatttaatc ggttatctaa
    11221 ccggcaccaa tgccaatcaa attgcgcagc taaatggttt aaataccggc tctccactga
    11281 aagtcgggca agtcttacgt gttcgttaat aggcagagaa aatgaacaga acccttttag
    11341 catttgcaat ttcttgtgca tttttgaccg cttgtagctc gcctactcag ccacaagttg
    11401 aagatccaaa tatgttacct gcaggcacat tacaaccgat tgaaggctca ggcgcaagcc
    11461 aagacagtta cagttggccg tctgatattc aatcaacgtc aatgcctgac agtatgaaat
    11521 aattttagga caatcattta atgaaaaaac aatttattct tctcccttta gtctctgctg
    11581 ttttggcagc ctgttcttca aacaatccag caccggtggt gaatgcttcc ggtaataacg
    11641 aattaagccc gggcgtgatg cagcctgttg atgtgagtgc aggtgcaatt aattcaagcg
    11701 gtggctggca gtctgatatt caatctgcac caatgccaag ctcgatgaat accactccgg
    11761 tgcaaacaat gccccagccg gtttcagtgc cacaacctgt ggcgactgta ccgcagccaa
    11821 ttaccaatcc ggtgattacc gaacaaccac cacagccgac aaccacgacc aaaatcgtga
    11881 aaaaaacgaa aacggtcgag aaaaaagtgg atcaaaattt tgagatcccg cgtgatgcca
    11941 acaatgcccc aatgtacaac caaattcaaa aagggttcta cgatggctct acctataccg
    12001 tacgcaaagg cgacacaatg tttttgattg cctatattgt gggtaaagat gtaaaagaaa
    12061 tcgccgctct taataatatg agcgaacctt accaattaag cgtagggcaa aaactcaaaa
    12121 ccggcaaatc tgcaacggaa actattaccg tggaagaaaa agtcaccgta ccggttgaac
    12181 cacaaattac ctaccaacaa ggtgcaaacg gcacaaccta tgcttctggc ggtaatatta
    12241 ctgggccggt aaaagcaggc acagccaacg ctgatgtcac gccggttaat aacggtatta
    12301 aagcaacaac tgcaactgct ccggcagtaa ctgcttctgt cggtacagta aatgcaacag
    12361 aggaccgtac cgcctccacc attcgtgcta tagatggcac agcaagtggt gccgtacaaa
    12421 gtagtaatac tgtttctgca ccagcttcat caattaaatg gcaatggcca accagcgggc
    12481 gtgtaatttc aggcttctcc tcagcagaag gaggtaataa aggcattgat attgccggca
    12541 ataaaggaca agatgtacgt gctgccgccg caggtaaagt ggtatatgcc ggtaatgcct
    12601 tgcagggtta cggtaactta atcatcatca aacataccga tgatttctta agtgcttatg
    12661 cacacaacaa tactattgaa gttgatgagc aagaaacggt gaaagccggt cagaaaatcg
    12721 cgactttagg tagtacagga accaatacga ataaattaca ttttgaaatt cgttacaaag
    12781 gaaaatctgt cgatccggct cgttatttac caagaaaata agagtaactt tttagcataa
    12841 tccgaccgct tgtgtactac aagcggtcaa tttttaggaa aattatgcaa atgaaaaaat
    12901 atatcgcaca catgataagt tcgttactgc tgatagcttg ttcggactac cgagcaacac
    12961 caactagccc aagcgatgct tacacttgct ctccttcttt tcgctactct ttcttaaaaa
    13021 aaacgtgcat acctttattc agtatagccg acattcaatt attggatcca accgagcctt
    13081 cacatcgcat ttatattttg ttatctgaag atcgatttca agccgaagtc ttctcaacga
    13141 agctctctga atcttctatg ttattggagg cggttaaagg aggctatatt tcaaaagacg
    13201 gaaaagttcg tttactcaaa aaagctgaag gttggaaaat ttactatgag tgagactaaa
    13261 atacgttgtg attggtgtaa aagcagtgaa atttatatga aatatcacga cgaagaatgg
    13321 ggaaaaccgg agtttgacag cctcaaactg tttgagaaaa tctgccttga agggcaacaa
    13381 gccggacttt cttggattac ggtgttgaaa aaacgggaag cctaccgcca agcattccat
    13441 cagtttaatc ctgaaaaaat tgccaaaatg ggtgaagaag aaattgattt gttaatgcaa
    13501 aacactagct taatccacca ccgagcaaag ttagaagcca ttataaaaaa tgcgaaagct
    13561 tatatcacaa tgcagcaaaa tggcgaagac ttcagtcggt ttatttggtc ttttgtgaat
    13621 tatcagccgc aaattaatga tgtaccaaca cttgaagctg ttcctgctca tacagaaacc
    13681 tcaaaagcaa tgtcaaaagc gttgaaaaaa cgtgggtttg tgtttgtagg cgagactact
    13741 tgctatgctt ttatgcagtc aatggggctg gttaatgacc atttgaataa ttgcgtgttc
    13801 aaacataaat aaacacaaaa aattaggcga ccatttggtc gcctaacatt aattcagatt
    13861 attgattgtt ttgaacgtaa tcaattgctg attgaactgt agtaattttt tcagcttctt
    13921 catctggaat ttcgatatcg aattcttctt ctaaagccat tactaattca acagtgtcta
    13981 aagaatctgc acctaaatct tcaatgaatg aagcttctgg ttttacatct tctgctttcg
    14041 cgccaagttg atcaacaatg atttttttta cgcgttcttc aatgctcatt ttgtttttcc
    14101 tatagtgaat atcgcataag tgcgagagtt aaatagtgta atcgaaataa gtttaaatac
    14161 aaccttttat aaaaaggtca aaccagacta ttcctataca ccagaatata tctgtttttc
    14221 cattctatca ttatgtttgt gtttaatcta tagagataaa tcaaatttca tttgattacc
    14281 ctactttccg taattcatct cgcatttgtg caatcactgc ttgataatct ggctggtcaa
    14341 aaatcgcaga acctgccaca aacatatctg ctcctgcggc tgcaatgtcg gcaatgttat
    14401 ttattttcac accaccatca acctctaagc gaatgttata accgctctca tcaatacgac
    14461 gacggacttc tttcaattta tctaaggtgg acggaataaa tgattgtccg ccaaagcccg
    14521 gattcacaga catcaataaa accacgtcaa ctttatccat cacataatct aaatagctca
    14581 atggcgttgc cgggttaaac accaagcctg atttacaacc taaatcacgg ataagctgta
    14641 aatttcgatc tatatgttcc gttgcttcag ggtggaatgt aatataatcc gctccggctt
    14701 tggcaaaatc cggaatcaaa cgctcaaccg gttttaccat taaatgcaca tcaatcgggc
    14761 attgaatgcc gtaatcacgt aaggctttgc agatcgccgg cccgaaggtc aaattcggca
    14821 cgtagtggtt gtccattaca tcaaagtgaa ttaagtctgc accggctttt aacacctctg
    14881 ccacatcatc acccaagcga gctaaatcgg cagataaaat agacggtgca attaaataag
    14941 gattcttact catatttcct cactatcaaa aaataaatct acgttagatt accataattt
    15001 taacagcgaa aagagtctct cttcctaaaa atccgtttt
//
LOCUS       DANLTI010000063        14927 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.063, whole genome shotgun sequence.
ACCESSION   DANLTI010000063 DANLTI010000000
VERSION     DANLTI010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14927
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.063"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            132..860
                     /gene="fabG"
                     /locus_tag="PXB09_001487"
     CDS             132..860
                     /gene="fabG"
                     /locus_tag="PXB09_001487"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5233604.1"
                     /translation="MNNTVLITGSSRGIGKAIALTLAQQGFDIVVHCRSRVEEAEAVA
                     QAVRNLGKNARVLQFDVADREKVRSILEADVEQHGAYYGVVLNAGLTRDNAFPALTDE
                     DWDSVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGI
                     IGAAKALAIELAKRKITVNCVAPGLIDTDILDENVPIEEILKMIPAGRMGDPDEVAHA
                     VAFLMDEKATYITRQVIAVNGGLC"
     gene            923..2068
                     /locus_tag="PXB09_001488"
     CDS             923..2068
                     /locus_tag="PXB09_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDL5233605.1"
                     /translation="MKRVVITGIGVVTAFGKEWAEIHGYQPPKHWNRKQLRSLGRVSQ
                     FVVEASERALAQAGLLDENGVIFDWLKDRRMGVACGSSTGSTNDIKDAAELLMTGKSD
                     GFNANTYVRMMPHTTAANIGIFFGLTGRIIPTSSACSSGSQGIGYAYEAIKYGMIPMM
                     LAGGGEEFCASKVYVFDSLYAASRRNDNPKGTPRPYDKDRDGLVIGEGAGMFVLEELE
                     HALARGANIIAEVVGYGANSDGSHVTRPQATTMQRCMELALKDAGIQPNQVGYVNGHG
                     TATEQGDIAETQATTAVFGKIPLSSQKSYLGHTLGACGALESWFSIEMMRDGWFAPTL
                     NLENVDERCGDLDYLQGDGREIHTDYVMNNNFAFGGVNTSLIFKRWK"
     gene            2082..2987
                     /locus_tag="PXB09_001489"
                     /pseudo
     CDS             2082..2987
                     /locus_tag="PXB09_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dialkylresorcinol condensing enzyme"
     gene            3010..4152
                     /locus_tag="PXB09_001490"
     CDS             3010..4152
                     /locus_tag="PXB09_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDL5233606.1"
                     /translation="MLSNVYITNTSAFLPNAPVSNDAMEAVLGMVGETPSRVRKMILR
                     SNGIQHRYYAIDPITRQATHSSTELAVQAVKKLGNSATSATCLAVGTSYPDQIMPGQG
                     VMVHGLLDAEPMEVLTTAGVCVAGMAAMKHAYNAVRIGEHRAAIATASETASAIMRSE
                     HFRAEIDHKKLDDARPEIGFEKDFLRWMLSDGAGAVLLANQPNEKGLSLKIHWIDLVS
                     YANEMPVCMYAGAEFIDGNYTGWKAMSEAQRAECSAMAVKQDVKLLNENIVKYTVEKA
                     LERIIPKYKLNAEEIDYFLPHYSSGSFRDKLLEGLQRINFLIPQEKWFTNLTTKGNTG
                     SASIYIMLDEFIRTHDLKQGQKILCYVPESGRFSSCFMLLEAVVNS"
     gene            4201..4416
                     /locus_tag="PXB09_001491"
     CDS             4201..4416
                     /locus_tag="PXB09_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5233607.1"
                     /translation="MDINDIPQDNSKIFNGERKVIYARNPQPEIRQMISSILACYAWD
                     ENNPFVAKSDARLKALAEVVGKAEIGD"
     gene            4697..5188
                     /gene="rplJ"
                     /locus_tag="PXB09_001492"
     CDS             4697..5188
                     /gene="rplJ"
                     /locus_tag="PXB09_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDL5233608.1"
                     /translation="MALNLQDKQAIVAEVNEAAKGALSAVVADSRGVTVEKMTELRKA
                     AREAGVTMQVVRNTLLRRAVEGTEFECLTDTFTGPTLIAFSNEHPGAAARLFTEFAKT
                     NKEFELKGAAFEGKKQDVAFLATLPTYEEAIARLMGTMKEAAAGKLVRTLAALRDQME
                     AAA"
     gene            5247..5615
                     /gene="rplL"
                     /locus_tag="PXB09_001493"
     CDS             5247..5615
                     /gene="rplL"
                     /locus_tag="PXB09_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDL5233609.1"
                     /translation="MSLTNEQIIEAIASKSVSEIVELITAMEEKFGVSAAAAVAAAPA
                     AGAAAAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISK
                     AEAEALKKELEEAGAKVEIK"
     gene            complement(5722..6552)
                     /locus_tag="PXB09_001494"
     CDS             complement(5722..6552)
                     /locus_tag="PXB09_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5233610.1"
                     /translation="MVQKPLNHYLEMQEHFLYVPYLHHHRRIRVLLPKDYHNEGWERY
                     PVLYMHDGQNVFYSKESYSGHSWKIIPTIKSHQELPKMIIVGIDNAGANRLNEYGPWK
                     TTTGSTPETRNAGGLGEEYAKWVVETVKPFIDIHYRTKPQQEHTLLAGSSMGGIITAY
                     MGSRYPHIFGHLGVFSLASWFSEPDFLRFTHQYPLQPNTKVFIQVGTNEGDEIDSHFI
                     SNTNQTYIDCSLNYYQALIRIGVPLDNIRLRIMANEIHHEMHWADHFVEFLHFSLLRK
                     "
     gene            6778..8319
                     /locus_tag="PXB09_001495"
     CDS             6778..8319
                     /locus_tag="PXB09_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDL5233611.1"
                     /translation="MQASLQDILEVVKAKNLTYQQKLMSLGNIAERLFNPIELLGYTE
                     EEWEHIENQMICDLNEGYAIYRPRYILPDYNVYMQKGCQFLDLPPPTNLDEALDGLLI
                     LYSHVPSITTFPVYIGRLDQLLEPFITDEEQDYIKIKRFLNHIDKTISDSFCHANIGP
                     NDTKAGRLILKAVIELENITPNMTIRYDKTKTSREFAELAAKACLLVSKPSFANDAYY
                     IQDLGEEYGIASCYNALPECGGAYTLTRLRLGTIGRACASVEQMVNEMLPKVAKLALS
                     TMDKRHKFLVEESNFFESSFLVQEGFIKRTNFTSMIAIVGLADAVNHLLKQEGLNETF
                     GQSKRGDEIATLIMDKLQAVNDAHKGLYVERTNNQYLLHAQVGANNHAEDKMNTPAHR
                     IRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYTDHLDAVVDIIDGSFAQGYRY
                     ITTYLKNTDLIRVTGYLVKKSEVERYRKGEAVLRDTTWYGSGTDDCAKVFDRQLRDEE
                     NVNAG"
     gene            8322..9110
                     /locus_tag="PXB09_001496"
     CDS             8322..9110
                     /locus_tag="PXB09_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDL5233612.1"
                     /translation="MAALSEIFVPLHRIIPFSNVEGQGNRTSIFLQGCKLNCLYCHNP
                     ETIPRYSKEAKQVSLQYLYDQVMEAVPFIRGVTISGGEPTIHHKKLVPLFEALREQGL
                     TCYLDSSGFFDFEATEPLINVTDKFLFDLKGDGAGLQTLCFDRKNQAGKVPEQALPNV
                     NHIKPENLARNLQNLAKLLPLDKVEEVRLVYLNEFYNAHHLLEKVADLLKPYPDVLLK
                     IIRVHTKGARDETGLARFVPTIEQTDELAAFAKRHGIQKVITIY"
     gene            9123..10380
                     /locus_tag="PXB09_001497"
                     /pseudo
     CDS             9123..10380
                     /locus_tag="PXB09_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
     gene            complement(10459..12468)
                     /locus_tag="PXB09_001498"
     CDS             complement(10459..12468)
                     /locus_tag="PXB09_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5233613.1"
                     /translation="MSAENMPSVIRFEQAVAKKDYESACTELLSILSKLDSNFGGISN
                     IELNMPEQIENLENDKAIYFCTRMAVAITRLFEDPALEISEHGAMRFLTLQRWIALIF
                     ASSPYVNADHILRTYNRNKESANPNTVDLDATLQALIKFCILYLPESNILLNLDAAWN
                     ASSDLTASLCFALQSPRFIGTSSAFAKRAAILQWFPEKLAQIENLNKLPSAISHDVYM
                     HCSYDIEANKHNVKRSLNAVIRRHLLSVGWEDRKIEQLGTRNNKPVMVVLLEHFHSSH
                     SIYRTHSTSMVAAREHFHLIGLGSDAVDEMGQQVFDEFHLLPQDGSLFDRLSFLKDIC
                     DKNNPAVFYMPSIGMDLTTIFASNTRLAPIQAVALGHPATTHSDFIEYVIVEDDYVGS
                     ESCFSEQLLRLPKDALPYVPSALAPQNVVYNLRENPEVIHIGIASTTMKLNPYFLEAL
                     KAIRDRAKVKTHFHFALGQSSGITHPYVERFIKSYLGNDATAHPHSPYDEYLNILHNC
                     DMMLNPFPFGNTNGIIDMVTLGLVGVCKTGPEVHEHIDEGLFKRLGLPNWLITQTAEE
                     YVTQAIRLAENHEERLAIRRDIIENNKLQTLFSGDPRPMGQIFLAKVQAWLADKNSKN
                     AEVEVKTKKVRKAATASQSAKKQTTSKTQTAKAEKDNTAKTETKS"
     gene            complement(12478..13815)
                     /gene="rimO"
                     /locus_tag="PXB09_001499"
     CDS             complement(12478..13815)
                     /gene="rimO"
                     /locus_tag="PXB09_001499"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDL5233614.1"
                     /translation="MSASPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYENADL
                     VIVNTCGFIDSAVQESLESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHS
                     YEAVMNHVHKYVPKPEFNPYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMR
                     GDLASRSIVQVLDEAKRLVDAGVKELLIVSQDTSAYSLDRKKEEATKTVFWNGMPIKS
                     NLITLCEQLGSMGVWVRLHYVYPYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAM
                     KRPGSIERTLERIKKWREICPELTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGC
                     FKFSPVEGAVATDMPDQVPEEVKEERFHRFMQLQQEISAARLQAKIGKTVQVIIDDID
                     EEGIIGRSMADAPEIDGVVYVDNPSNQLVTVGQIISVTITHADEYDLWGILNN"
     gene            complement(13970..14662)
                     /gene="mtnN"
                     /locus_tag="PXB09_001500"
     CDS             complement(13970..14662)
                     /gene="mtnN"
                     /locus_tag="PXB09_001500"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDL5233615.1"
                     /translation="MKIGIIGAMAQEIEILRQVMVEPKVTELAGCKIFEGKINNTRVA
                     LLQSGIGKVAAAIGTTLLIQLTQPDMIINTGSAGGLDPDLNVGDILISTEVRYHDVDV
                     TAFGYEIGQLPANPPTFSPNEQLVELAQKEAKKAGYNVVSGLICSGDAFINGNDKINQ
                     IRQNFPNVVAVEMEAAAIAQVCHGFNLPFVIVRAVSDVADKESHLSFEEFLPLAAEKS
                     STIVLAMLNNID"
     gene            complement(14720..>14927)
                     /locus_tag="PXB09_001501"
     CDS             complement(14720..>14927)
                     /locus_tag="PXB09_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDL5233616.1"
                     /translation="TLSAKITELETKVAFQELIIEELNQALIEQQFAIDKLQTQIRHI
                     AEKLKGAQLSQVASQAEETPPPHY"
BASE COUNT         4275 a         3087 c         3337 g         4228 t
ORIGIN      
        1 agatcggagt aaagaattat ctcgtagaat attaaaaagt ttagaacaaa aaaatattct
       61 cacttggcac ggcttaagtc caaaagatcc aacccaatac tacacactca agaaatagta
      121 ggaaatataa gatgaataat acagttctca tcaccggctc aagccgtggt atcggtaaag
      181 cgattgcttt aacccttgca caacaagggt ttgatattgt ggtacattgc cgttctcgtg
      241 tggaagaagc ggaagcggtg gcacaagcgg tcagaaatct cggaaaaaat gccagagtgt
      301 tacagtttga tgtggcggat cgtgaaaaag tgcggtcgat tttagaggca gatgtggaac
      361 aacatggtgc ctattacggc gtggtgctaa atgcagggct tacccgtgat aacgcctttc
      421 ctgctttaac cgatgaggat tgggatagcg tgttgcgtac caatttagac ggtttttata
      481 atgtcctgca cccgattatg atgccgatga tccgtcgccg taaagcaggc aggattgtct
      541 gtatcacctc ggtttccggc ttgatcggca accgtgggca ggtcaattac agcgcttcaa
      601 aagccggcat tattggtgcg gcaaaagcac tcgccatcga gcttgccaaa cgtaaaatca
      661 cggtaaactg cgtggcgccc ggcttgattg ataccgatat tctggacgaa aacgtcccaa
      721 tcgaagaaat tctcaaaatg atccccgcag gacgaatggg cgatcctgat gaagtggcac
      781 acgccgttgc gtttttaatg gatgaaaaag ccacttacat cacacgccaa gtcatcgctg
      841 tgaatggtgg gttgtgttaa ctttaggata ataattcgta ggggcggatc cagtacccgc
      901 ccgaagccaa aaagagataa atatgaaacg agtcgtcatc accggaattg gtgtggttac
      961 cgcttttggt aaagagtggg cggaaattca cggctatcaa ccgccgaaac attggaaccg
     1021 caagcagttg cgcagccttg ggcgagtgtc gcaatttgtg gtggaggcca gcgagcgggc
     1081 tttagcacag gccggtttgt tggacgaaaa cggcgtgatt ttcgactggc taaaagacag
     1141 gcgaatgggc gtggcgtgtg gctcgtccac aggctctacc aatgacatca aagatgccgc
     1201 cgaattgctg atgaccggca aatcggacgg tttcaatgcc aacacctatg tgcgaatgat
     1261 gccccacacc accgctgcca atattggcat tttcttcggg ctgacagggc ggattatccc
     1321 gacttccagc gcttgctcct cgggcagcca aggtatcggt tacgcttacg aagccattaa
     1381 atacggtatg atcccgatga tgcttgccgg cggtggagaa gaattttgtg cctccaaagt
     1441 ctatgtcttc gacagcctct atgctgccag ccgccgcaac gacaacccaa aaggcacgcc
     1501 acgcccctat gacaaagacc gagacggctt agtgatcggc gagggagcgg gaatgttcgt
     1561 attggaagag ctggaacacg cgttagcacg aggggcaaac attatcgccg aagtggtggg
     1621 ctacggtgca aacagtgacg gttcccacgt cacccgccca caagccacca caatgcaacg
     1681 ctgtatggaa cttgccctta aagatgccgg tattcaaccg aaccaagtcg gctatgtaaa
     1741 cggacacggc acggccaccg agcagggcga cattgccgaa actcaagcca ccacagcggt
     1801 gttcggcaaa attccgctca gctcgcaaaa aagctactta gggcatacgc tcggtgcgtg
     1861 tggtgcattg gaaagctggt tcagcattga aatgatgcga gacggctggt tcgccccaac
     1921 actgaattta gaaaatgtcg atgaacgctg tggcgacttg gattaccttc aaggtgacgg
     1981 acgggaaatc cacaccgatt atgtgatgaa caacaatttc gccttcggcg gtgtgaatac
     2041 ctcattgatt tttaaacgtt ggaaataacc gttttcaaat aatgaaaaag atattattag
     2101 tttattactc ccaaaccggg caactcaccc atttggcaga aaattttgta caatcgcttg
     2161 aacaagcggg cgtttttgtg gaaaaactcg caatcaaacc gcaacaggaa tacccgtttc
     2221 cgtggcggtt tatgcgtttt tttaacacct tccccgaaac cgtccacctc acaccgccgc
     2281 cgattgagcc tctgcccttt cagcacgaaa tatacgattt ggtgatcatc gcctattccg
     2341 tgtggtttct ctcccccagc cagccgatta ccgctttttt acagagtgaa caggcaaaaa
     2401 agtgttgaag gatacgcccg tcatcacgct gatcggctgt cgcaatatgt ggctgatggc
     2461 gcaggaaaaa gtgaaaaaac tgcttgccga gagtgaggcg aagctcattg gcaacgtggt
     2521 caaagtggat caatctaacg actgggcgag ttttatcacc acaccgcttt ggatgctgac
     2581 cggcaagaaa aaaaatcggc aagctgccga gcgctggcat tgccgaaagc gaaatggaag
     2641 atgtaaaacg cttcggggca aaacttttgc acatttttag ccaaaaccaa ccgcttgaca
     2701 gcaccctttt ccgccaaatg caagcggtca aaattgacga aaaattgatg atgagcgaaa
     2761 aagtcggtgc gagaagtttc cacctttggg gcaaattact gatcaagtgc ggtcaaattt
     2821 caccgcactt acgccaagcg gtactctatt tttacatcct ctttttagtg acgttaattt
     2881 taaccgtcgt cccgatttca acggtgatta aacggctatt acgcccactg ctgaaagaaa
     2941 aattagaaaa acaaaaacgg tattttgccg agccttcggg cgagtaaacg taccctacac
     3001 ggaaacttta tgctatctaa cgtctatatc accaacacct ccgccttttt acccaacgcc
     3061 cctgtgtcca acgatgcaat ggaagcggtg ttgggaatgg tgggggaaac gccttcccga
     3121 gtgcggaaga tgattttgcg ttctaacggt attcaacatc gttattatgc cattgacccg
     3181 ataacccgcc aagcgactca cagcagtacc gagttggcgg tgcaagcggt caaaaaattg
     3241 ggaaattctg caacatcagc gacttgcttg gcggtgggga catcttaccc cgaccaaatt
     3301 atgccggggc agggggtgat ggtacacggc ttgcttgatg ccgaaccgat ggaagtgctg
     3361 accactgccg gtgtgtgcgt ggcgggaatg gcagcgatga agcacgccta taatgccgta
     3421 cgcatcggtg agcatcgtgc tgcgattgca acggcttccg aaaccgcctc cgccattatg
     3481 cgcagtgaac atttccgtgc cgaaatcgat cataaaaaac tggacgatgc tcgccctgag
     3541 atcggttttg agaaagattt cctgcgttgg atgctctcag acggtgcagg ggcggtattg
     3601 cttgccaatc agccgaacga aaaagggttg agcctcaaaa ttcactggat cgatctggtc
     3661 tcttacgcta acgaaatgcc ggtttgtatg tacgccggtg cggaatttat tgacggcaac
     3721 tacaccggct ggaaagcaat gagcgaagcc caacgtgccg aatgctcggc aatggcggtg
     3781 aaacaagatg tcaaactgct caacgaaaac atcgtcaaat acacggtgga aaaagcattg
     3841 gagcggatta tcccgaaata caagctcaac gctgaagaga ttgactactt cctgccgcac
     3901 tactcgtccg gttccttccg agataaatta ttggaaggtt tacagcggat caatttcctg
     3961 atcccacagg aaaaatggtt caccaacctg actaccaaag gcaacactgg gtcagcctcg
     4021 atctacatta tgctcgatga atttatccgc acccacgatc tcaaacaggg acaaaaaatc
     4081 ctctgctatg tgccggaaag cggacgtttt tcgtcttgtt ttatgctttt ggaagcggtg
     4141 gtaaattcgt aaaatcgtag ggacgggggc tattcccgtc caacaatcat cggaaaacgt
     4201 atggacatca atgacattcc ccaagacaac agcaaaatct tcaacggcga acgcaaagtg
     4261 atctacgccc gcaatccgca accagaaatc cgccaaatga tctcctctat tctcgcttgc
     4321 tacgcttggg acgaaaacaa cccgtttgta gcgaagtctg atgcacggtt gaaggcattg
     4381 gcggaagttg ttggtaaagc agaaattggc gattaagttt gattttgtgc tttacagggt
     4441 cgcagattat ctgtataatt tgcgacctta acttgcgaga gcaagctgat ggtgcttagc
     4501 ctatctaagc cccgtctaag actgtagggg tgaaaactta ataatcctac atagatggtg
     4561 aacagacaga attctctgct tctggacacc ttaggctcaa agaagattgc agtttgtagc
     4621 aatgcaagcg gtaatatttt tgggattttt tgtaaattct gcttgaaaag gcagagtgta
     4681 tcaggagcta aaaccaatgg cattaaatct tcaagacaaa caagcgattg ttgctgaagt
     4741 aaacgaagct gccaaaggtg cactttcagc tgttgttgcg gattctcgcg gtgtaacagt
     4801 tgaaaaaatg actgagttac gtaaagcagc tcgtgaagct ggtgtgacaa tgcaagttgt
     4861 acgtaatact ttattacgtc gtgcagtgga aggcaccgag ttcgagtgct taacagatac
     4921 gtttaccggt ccaactctta tcgcattctc aaatgaacac ccaggtgcag cagcacgttt
     4981 attcactgaa tttgcgaaaa caaacaaaga gtttgaactt aaaggtgcag cctttgaagg
     5041 taaaaaacaa gatgttgcat tcttagcaac cttaccaact tacgaagaag caattgcacg
     5101 tttaatgggc acaatgaaag aagctgcggc aggcaaactt gttcgcactc ttgcagcatt
     5161 acgcgatcaa atggaagcag cagcttaatt ttaagcactc ttctttattc gtttaacaac
     5221 ttattttact ttaggaatcg attgttatgt cattaactaa cgaacaaatc attgaagcga
     5281 ttgcttctaa atcagtatca gaaatcgttg aattaatcac tgcgatggaa gaaaaattcg
     5341 gtgtttcagc agcggcagca gtagcagcag ctccagcagc aggcgcagcg gcagcagaag
     5401 agaaaactga gtttgatgta gtattagcag aagctggtgc aaacaaagtt gctgtaatca
     5461 aagcagtacg tggtgcaaca ggtttaggct taaaagaagc taaagactta gtagaatcag
     5521 ctccagctgc attaaaagaa ggcatctcta aagcagaagc tgaagcactt aagaaagaat
     5581 tagaagaagc tggcgcgaaa gtagaaatca aataattttt gatttatttt gtcagaactt
     5641 caagttcaac aaaccccgat ggaaacatcg gggttttgtt ttttcagaat tgtgtaatgt
     5701 agatatgatt acctttatcc attacttgcg cagcagtgaa aaatgtaaaa attccacaaa
     5761 gtgatctgcc cagtgcattt cgtggtggat ttcatttgcc ataatccgca ggcggatatt
     5821 gtctaacggc acgccaatcc gaatcagtgc ttggtagtaa ttgagcgaac aatcaatata
     5881 ggtttggttc gtattagaga taaagtgcga atcgatttca tcgccttcgt tagtgccaac
     5941 ctgaataaac actttggtat tgggttgtaa cggatattgg tgcgtaaaac gcagaaaatc
     6001 cggctcacta aaccaagagg caagcgaaaa cacccctaaa tgcccgaaaa tatgtgggta
     6061 gcggctgccc atataagcgg tgataatgcc acccattgaa ctgcctgcca ataaggtatg
     6121 ttcttgctga ggcttggtgc gatagtgaat atcaataaag ggtttaaccg tttccaccac
     6181 ccatttggca tattcctccc ctaagcctcc ggcatttcgg gtttcagggg ttgagccggt
     6241 ggttgttttc cacgggccgt attcatttaa gcgattagct cctgcgttat caatgccgac
     6301 aataatcatc ttcggtaatt cttggtgtga tttaatggtt ggaataattt tccaagaatg
     6361 ccccgaataa gactctttgc tgtaaaacac attttgcccg tcgtgcatat ataacaccgg
     6421 ataacgttcc caaccttcgt tgtgataatc cttcggcaat agtacccgaa tgcggcggtg
     6481 atggtgtaaa tagggaacat ataaaaaatg ctcctgcatt tctaaatagt ggttaagtgg
     6541 tttttgtacc atcagtctgt ccttttgctt aaattgtggc gtattttaca ccttaatcag
     6601 tctgagttaa aacaagcggt cagaaaaagt caaaaatttg caaattgctg ttacctaacg
     6661 caatcggttg ccttatgctt ttgaggaata taaaagagaa actgtgatct aagtcacagc
     6721 aatttttatt cggtttgact aaaatccgaa ctatcactta atagagagga aaatgttatg
     6781 caggcttcat tacaagatat tcttgaggta gtaaaagcaa aaaatctcac ttatcagcaa
     6841 aaattgatga gtttaggcaa tattgctgag cggttattta acccgattga actacttggc
     6901 tacactgaag aagagtggga acacattgaa aatcagatga tttgcgattt aaatgaaggt
     6961 tatgcgattt atcgcccacg ttatattttg cctgattata atgtgtatat gcaaaaaggt
     7021 tgccaattct tagatttacc tccgccaacc aatttagatg aagccttaga cggcttgtta
     7081 attctgtatt cacacgttcc gtccattact acttttccgg tgtatatcgg gcgtttagac
     7141 caactgttag aaccgtttat aaccgatgaa gagcaagatt acattaaaat caagcgtttc
     7201 ttaaatcata tcgataaaac catttccgat tctttctgcc acgctaacat cgggccgaat
     7261 gacaccaaag ccggtcgttt aatcttaaaa gcggtgattg agcttgaaaa cattacaccg
     7321 aatatgacga ttcgttatga taaaaccaaa acatcgcgtg aatttgccga actggcggcg
     7381 aaagcgtgct tgttggtgtc caaaccgtct tttgctaatg atgcctacta cattcaagat
     7441 ttaggcgaag aatacggaat tgcaagctgt tataacgcct taccggaatg tggcggtgct
     7501 tacactctga cccgcctgcg tttaggtact atcgggcgtg cttgtgcgag tgttgaacaa
     7561 atggtcaatg agatgctgcc gaaagtggca aaactcgccc tttccacgat ggataaacgg
     7621 cataaattct tggtggaaga aagcaatttc tttgaaagta gcttcttggt tcaggagggc
     7681 tttatcaaac gtactaactt cacaagtatg attgcgattg taggtcttgc tgatgcggtg
     7741 aatcatttac tcaagcaaga aggtttaaat gaaacctttg ggcaaagcaa acgtggcgat
     7801 gaaattgcga cgctgattat ggataagctc caagcagtaa atgacgctca taaagggctg
     7861 tatgttgaac gaaccaataa ccaatatctg ttacacgctc aagtgggggc aaataaccac
     7921 gctgaagaca aaatgaacac gccggcacac cgcattcgtg tgggcgaaga gccaacctta
     7981 ttggcacact taaaacagtc tgctcctttc cataaatatt tcccatccgg tacgggggat
     8041 ttattcgcct ttgaccaaac ctacactgat catttagatg cggtggtgga tattattgac
     8101 ggctcgttcg cccaaggtta tcgctacatt accacttacc tgaaaaatac tgatttgatt
     8161 cgagtgacag gctacttggt gaaaaaaagc gaggttgaac gttatcgcaa aggcgaagcg
     8221 gtattgcgtg ataccacttg gtatggttca ggcaccgatg attgtgcgaa agtgttcgac
     8281 cgccagctgc gtgatgaaga aaatgtgaat gcagggtaac aatggctgca ctttctgaga
     8341 tttttgtgcc gttacaccgc attatcccct tctcgaatgt agaagggcag ggcaatcgta
     8401 ccagcatttt tctacaaggt tgcaagctga attgcctgta ttgccataac ccggaaacca
     8461 ttccacgtta tagcaaggaa gcaaaacagg ttagcttgca atacttgtac gatcaagtga
     8521 tggaggcagt tccctttatt cgaggagtca ctatttcggg tggagagcca accattcatc
     8581 ataaaaaatt agtgccactg ttcgaggcgt tgcgtgagca agggctaacc tgttatttag
     8641 acagcagcgg cttttttgat tttgaggcaa cagagccgtt aattaatgtt accgataaat
     8701 ttctgttcga tctcaaagga gatggggcgg gcttacaaac gctatgcttt gatcggaaaa
     8761 accaagccgg caaagtgcct gaacaggctc ttccaaacgt gaatcatatt aaacctgaaa
     8821 acttggctcg caatttgcaa aatttagcca aattattacc gcttgataag gtggaagaag
     8881 tacgtttggt ttacctcaat gagttttata acgcccacca tttgctcgaa aaagtggctg
     8941 acctacttaa accttaccca gatgtactac ttaaaattat tcgggtacac accaaaggag
     9001 cgagagatga aacaggcttg gctcgttttg tacccactat cgagcaaacc gatgaactgg
     9061 cagcatttgc aaaacggcac ggtattcaaa aagttattac tatttactaa tggagactta
     9121 cgatggatat actaattagc ataattggtg tttttgtgtt attaggctta ggtgttttat
     9181 tatcaaataa tcgcaaagcc attaaatttc gcacaatttt gggcgctttg gcgattcaaa
     9241 ttggttttgc cgctcttatt ctttactttc cagcgggaag aaatgcattg ctagctactg
     9301 caaattgtgt gagcaatatt attaattatg gtaacgaagg tattagcttt gtgtttggca
     9361 atttagcgaa tccgagtaat agcagcattg gttttgtgtt tgcggttaaa gtattgccta
     9421 ttattatctt cttctctgcg ttaatttcaa tgctttacta ccttggtgtg atgcaatggg
     9481 tgattaaaat tattggtgga gcattacaaa aaacactagg cacttccaag gcagaatcaa
     9541 tgtcagcggc agctaattat ttttgttggt cagacagaag ctcctctagt tgtaaaacca
     9601 tacattagcc gtatgacaga gtcagaatta tttgccatta tggttggtgg aactgcttca
     9661 attgctggtt ccgttatggc tggttatgcc ggaatgggcg ttcctttaac ttatcttatt
     9721 gcggcctcct ttatggctgc accagctggg ttactatttg ctaaattaat gtatcctcaa
     9781 acggaaacct tggagagtaa agcagatgac aatgttgaag ttgaaaagcc aaataacgtg
     9841 gttgaggccc tagctaatgg tgctagtgca ggtgttactt tggctattaa tgtcggtgct
     9901 atgttaatag catttattgc agtgatcgct ttattaaatg gctttattgg tggcattggt
     9961 aattggtttg gttatgaggg gctaacctta caaattttat taggttattt attccaacca
    10021 cttgctttct taatcggtgt gccgtggcaa gatgccgata ttgcaggtca aatgataggt
    10081 atgaaacttg ctgttaatga atttgtcgga tatcttgagt ttgctaaata tctacagcct
    10141 gatgctgtgg tgcaattaag cgataaaact aaggcaataa ttacttttgc tttatgtggt
    10201 tttgcaaact ttagagcaat tgcggtattg attagtggta tcggaagtat ggcaccaagt
    10261 cggcgttcag atattgctcg tttaggttta aaagcagtga ttggcggcac attggcgaac
    10321 ttaatgagtg caactatagc gggtttcttt attggtttaa gtggtgccac attaggttga
    10381 tacaagcggt taaattgact cacttttttg caaaaagccc aagtaagtta aatgactact
    10441 tgggctttgt ttaatgaact agctcttagt ttcggttttt gctgtgttat ccttttccgc
    10501 tttggctgtc tgtgttttcg aagttgtctg tttttttgcg gattggctag cagtagctgc
    10561 ttttcttact ttctttgttt taacttctac ttccgcattt ttagagtttt tatccgctaa
    10621 ccatgcctgc actttagcta agaatatttg tcccatcggg cgaggatcgc cagaaaataa
    10681 tgtttgtaat ttattatttt caataatgtc gcgtctaatt gctaagcgtt cttcgtggtt
    10741 ttccgctaaa cgaatagctt gagtaacgta ttcctctgct gtttgggtaa ttaaccaatt
    10801 aggtagcccg aggcgcttaa ataaaccttc atcaatatgt tcatgaactt cagggcctgt
    10861 tttacagaca ccaactaaac caagcgtaac catatcgata atgccgtttg tatttccaaa
    10921 tgggaatgga tttagcatca tatcgcaatt atgtagaata tttagatatt catcatatgg
    10981 cgaatgtggg tgtgcggttg catcatttcc taaatagctt ttgataaaac gttccacata
    11041 aggatgcgta attccactag attgccctaa tgcaaaatgg aaatgagttt ttaccttcgc
    11101 cctatcacga atggctttta atgcctctaa gaaatatggg tttaatttca tagtggttga
    11161 tgcaattccg atatggataa cctctggatt ttcacgtagg ttatagacca cattttgagg
    11221 cgctaatgcg gaaggcacat agggtagcgc atcttttgga agacgtaata attgttcact
    11281 aaagcagctt tcggaaccaa catagtcatc ttctacgatg acatattcaa taaaatcaga
    11341 gtgtgtagtt gccggatgac ctagcgcaac agcttgaatt ggtgctaggc gagtgttact
    11401 agcgaaaata gtggttaaat ccattccaat gctaggcata tagaatacgg ctggattatt
    11461 tttatcacag atatctttta aaaagcttaa gcggtcaaat agtgagccat cttgtggtaa
    11521 taaatgaaat tcgtcgaata cctgttgccc catttcatct acagcatcac tgcctagccc
    11581 aataagatgg aaatgttcgc gtgcagcaac cattgaggtt gaatgagtac gataaataga
    11641 atgtgatgaa tggaaatgct ccaataatac taccatgaca ggtttattat ttctggtacc
    11701 aagctgttca atttttctat cttcccaacc gacagaaagt aaatgacgac gaattacagc
    11761 atttaacgac cgttttacat tatgtttatt tgcttcaata tcataactgc aatgcatata
    11821 aacatcgtgt gaaatggcgc tcggtagctt gttcaagttt tcaatttgcg ctaatttttc
    11881 tgggaaccat tgcaaaatag ccgcgcgttt tgcaaaagca gaggatgtac caataaatct
    11941 aggtgattgg agtgcaaaac aaagtgatgc ggtgagatct gatgaagcat tccatgcagc
    12001 atctagattc aataaaatat tagattccgg taagtataaa atacagaact taattagtgc
    12061 ttgtaatgtg gcatctaaat caaccgtatt tggattagca gattctttat ttctattgta
    12121 agtacgcaag atatggtctg cgtttacgta tggagaactg gcaaaaatta atgctatcca
    12181 gcgttgtaat gtcagaaaac gcatagcacc gtgttcggag atctctaatg caggatcttc
    12241 aaacaagcga gtaatcgcta ccgccattcg agtacagaaa tagatagctt tatcattttc
    12301 taaattttca atctgctctg gcatattcaa ttcaatattg gaaatgccac caaaattact
    12361 atctaatttt gaaaggatag acagtagctc ggtacaagcc gattcataat cttttttcgc
    12421 gaccgcctgc tcaaaacgga tgacgctagg catattttct gctgacataa tgtatcctta
    12481 gttgtttaaa attccccaca gatcatactc atctgcatgt gtaatggtta ctgaaataat
    12541 ttgccctact gtcactaatt ggtttgaagg attatctaca tagactacac cgtcaatttc
    12601 cggtgcatct gccattgagc gaccgataat gccttcttcg tcaatgtcat caataattac
    12661 ttgtacggtt ttgccgattt ttgcttgtaa gcgagcagcg gaaatttctt gttgtagttg
    12721 cataaaacgg tggaaacgtt cctcttttac ttcttccgga acttgatccg gcatatcggt
    12781 agcaacagca ccttccactg ggctgaattt aaagcaacca acacgatcta attgtgcttc
    12841 ttttaagaaa tcgagtaata gttggaaatc ttcttctgtt tcccctggga agccgacaat
    12901 aaaggtagaa cgcagagtta attcagggca aatttcacgc cattttttaa tgcgttctaa
    12961 ggttctttcg attgaacccg ggcgtttcat cgcttttaag attttcgggc tggcgtgttg
    13021 gagtggaata tccaaatacg gcaaaatttt gccggcagcc ataagcggaa ttaaatcatc
    13081 tacgtgtggg tatgggtaaa catagtgcaa acgcacccac acgcccattg agcctaattg
    13141 ctcacatagc gtaattaaat tacttttaat cggcataccg ttccagaaaa cggttttggt
    13201 tgcttcttct tttttgcgat ctaacgaata ggctgaggtg tcttgtgaga cgattaacag
    13261 ctcttttacc ccggcatcaa ctaggcgttt tgcttcatct aatacttgca cgatagaacg
    13321 gcttgctaaa tcgccacgca ttgaaggaat aatgcagaaa gtgcagcgat gatcgcagcc
    13381 ttcggaaatt ttcaaataag cgtaatgctt cggtgttaat ttaatccctt gttttggcac
    13441 taagctggtg taagggttaa attccggttt tggcacatat ttatggacgt ggttcattac
    13501 cgcctcatag ctatgtggcc ctgtaatttc caatacttta gggtgtacct cacgaatttg
    13561 gttttctttt gcccctaaac agccggtgac aattactttt ccgttagctt ctaacgcttc
    13621 accaatgctt tcaagagatt cttgtactgc ggaatcaata aaaccgcagg tgtttacaat
    13681 cacaagatcc gcattttcat aactagggat gatgttataa ccatccgcac gcagttcggt
    13741 caaaatacgt tcggaatcaa ctaaattttt agggcagcct aagctgataa aaccaatatt
    13801 tggtgaagca ctcatataac tctcaataac taaaaagaaa aatgcctaca atttttgtct
    13861 gtaggcaaaa aactaacaag attctacaaa atcttgccca aaatagcgat aacaagcggt
    13921 caatttttaa taaacattta caaacttgaa atttcgctaa caattaaaat taatcgatat
    13981 tatttagcat tgctaataca atcgtggaag atttttctgc ggctaatggc agaaattctt
    14041 caaaagaaag gtgggattct ttgtccgcta catccgatac tgctcttacg attacaaatg
    14101 gaaggttaaa accgtgacaa acctgcgcaa tggctgctgc ttccatttcg actgcaacga
    14161 cattcgggaa attctgacga atttgattaa tcttatcatt accgttaata aaggcatcgc
    14221 cgctacagat taagcctgaa accacattgt aaccggcttt tttcgcttcc ttttgagcta
    14281 attcgactaa ttgctcgttt ggcgaaaatg ttggcgggtt tgccggtagt tgcccgattt
    14341 cataaccaaa ggcggtcaca tcaacatcgt gataacgaac ttcggttgaa atcaaaatat
    14401 cacctacgtt taaatctgga tctaatccac cggcagagcc tgtattaata atcatatccg
    14461 gctgggtgag ctgtatcagt aaggtagtgc cgatggcggc agcaactttg ccgatacccg
    14521 attgtaataa tgccacacgg gtattgttaa ttttgccttc aaaaatttta caacctgcta
    14581 attcagtgac tttaggttca accattactt ggcgtaaaat ctcaatttct tgtgccatcg
    14641 caccaataat accaattttc attactttcc ttctctaatg tattgtttat tttttgaaaa
    14701 aaacgctatt ttaacagcat taatagtgag gagggggtgt ttcttctgct tgtgaagcaa
    14761 cttggcttag ttgagcccct ttcaatttct cagcaatatg gcgaatctga gtttgtaact
    14821 tatcaattgc aaattgttgc tcaataagtg cttgatttaa ctcttcaata atcagctctt
    14881 ggaaagcaac tttagtctcc aattcggtaa tttttgccga taatgta
//
LOCUS       DANLTI010000064        14891 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.064, whole genome shotgun sequence.
ACCESSION   DANLTI010000064 DANLTI010000000
VERSION     DANLTI010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14891
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.064"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            168..599
                     /locus_tag="PXB09_001502"
     CDS             168..599
                     /locus_tag="PXB09_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5233617.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEPKKGNPFYACRIAAL
                     VGESDSPEYRYFDMNVVGKETETLIKRCQKAVSEEKKVLVSFVMADLWFDTFTYSTDS
                     KFHKKGDTGVSVKGRLIRIKMIKIDGEIAYQEKPKSDEQSE"
     gene            617..1609
                     /locus_tag="PXB09_001503"
     CDS             617..1609
                     /locus_tag="PXB09_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005588345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233618.1"
                     /translation="MLCWALLLDVQDLRVTFKTPDGDVTAVNDLTFSLNAGETLGIVG
                     ESGSGKSQTAFALMGLLADNGRISGSAKFNGQEILNLPETQLNRLRAEQIAMIFQDPM
                     TSLNPYMKIGEQLMEVLMLHKGMDHKTAFEESVRMLDAVKMPESRKRMNMYPHEFSGG
                     MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLG
                     VVAGICDNVLVMYVGRTMEYGTAEQIFYTPSHPYSIGLIGAVPRVDGQEEELITIPGN
                     PPNLLRLPSGCPFQPRCVHATKQCLKAPALTLLNDQRLRACFVPAEQLIRGNAS"
     gene            1606..2595
                     /gene="oppF"
                     /locus_tag="PXB09_001504"
     CDS             1606..2595
                     /gene="oppF"
                     /locus_tag="PXB09_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDL5233619.1"
                     /translation="MNTEKKVILEVKDLSVHFNIKDTKSLFFAKHQTLKAVNHVSFQL
                     YEGETLGVVGESGCGKSTLARAIIGLVESSGGNILWLGKELTQQSAKEWKTIRSDIQM
                     IFQDPLASLNPRMTIGSIIAEPLKIYQPHLTAEEVKEKVRAMMMKVGLLPNLINRYPH
                     EFSGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVVNLLKSLQREMGLSLIFI
                     AHDLAVVKHISDRVLVMYLGNAVELGDYEQVYHDTKHPYTKALMSAVPIPDPQLERNK
                     QIQLLEGDLPSPINPPSGCVFRTRCPLADQHCIADKPLLKGRDNHVVACFKAE"
     gene            complement(2699..3457)
                     /locus_tag="PXB09_001505"
                     /pseudo
     CDS             complement(2699..3457)
                     /locus_tag="PXB09_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
     gene            complement(3587..4228)
                     /gene="bioD"
                     /locus_tag="PXB09_001506"
     CDS             complement(3587..4228)
                     /gene="bioD"
                     /locus_tag="PXB09_001506"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDL5233620.1"
                     /translation="MAKVFFITGIDTDIGKTIATGWYAKKLMQQGASVITQKMIQTGC
                     RGIAEDLLIHRKIQGIELTEEDKQGITCPYVFDYPCSPHLAAKLEPRTIERKKIETCT
                     ALLCEKYDYVLLEGAGGLCVPYNEEETTLDYLCQHQYPVILVTSGKLGSINHTLLSLQ
                     VLNSKRVSVHAVIYNLYPETDQVISQETQHFLRRYLEKYSPNTLFEIMDLISV"
     gene            complement(4246..5001)
                     /gene="bioC"
                     /locus_tag="PXB09_001507"
     CDS             complement(4246..5001)
                     /gene="bioC"
                     /locus_tag="PXB09_001507"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDL5233621.1"
                     /translation="MDRIDKGRIKQRFSAAVSNYDQQARAQQQIHQRLLSLLSYIDRQ
                     AFQRALEIGCGTGGLTKQLMSQLQVEHWELNDLCDMREHLQSVLPQPFHFHCGDAEQL
                     PFPQQYDLIASASVVQWFEDKAGFIARCKVRLKKHGFLLFSTFTPENLTQIKHLTGVG
                     LTYPRLEDWQKWLVPEFEILALEHEEIVLHFDDPLAVLKHLKQTGVTATQQQRWTKGQ
                     LHAFCQQYQQHYRNAQHKVELTYTPMYVLARLT"
     gene            complement(5005..5652)
                     /locus_tag="PXB09_001508"
     CDS             complement(5005..5652)
                     /locus_tag="PXB09_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005758126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDL5233622.1"
                     /translation="MKTQHISQQGDNLIVYFAGWGTPPSVVEHLILPENYDLCLCYDY
                     RDLHCDVDFSAYQHIRVVAWSMGVWVAERVMQGYPLLSATAINGTGLPCDDQYGIPEA
                     IFAGTLSGLNEDNRTKFERRICGSKTLLRDYQHYSMRPTLQEIHAELTALYTFLQQDH
                     RTDLISWSKAIVGSKDKIFPAQNQRAYWQDRCAITEIAGEHLLFPHFTHWETCWL"
     gene            complement(5649..6812)
                     /gene="bioF"
                     /locus_tag="PXB09_001509"
     CDS             complement(5649..6812)
                     /gene="bioF"
                     /locus_tag="PXB09_001509"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDL5233623.1"
                     /translation="MIRYYQQQLADLKAQNQFRQLPQLIHRGRFIQREDNTMLNMSSN
                     DYLGLANNEALRQAFFTQYQDQLPALTSSSSRLLTGSFPIYDELESLMAQAFGRETAL
                     LFNSGYHANIGILPALADKKTLIVADKLVHASMIDGIRLAQCEFVRFRHHDYVHLEQI
                     LQKNDRTFERIIVVTESVFSMDGDCADLTQLVALKQRYPQVMLYVDEAHAIGVLGEKG
                     LGLAEQQGCINQIDILVGTFGKALGSMGAYVICDQVIRDYLVNKMRPLIFSTALPPFN
                     VAWTHFVFQQLPHLQAERAHLAQLSQHLRQAIVDIFQVPMPSESCIVPYILGDNELTV
                     RTAQRLQQQGYYCLPIRPPTVPKGTSRIRFSLTADMQVAEVEQFIACLRELAE"
     gene            complement(6809..8110)
                     /locus_tag="PXB09_001510"
     CDS             complement(6809..8110)
                     /locus_tag="PXB09_001510"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDL5233624.1"
                     /translation="MNEQQLLECDRQHIWHPYAALNADFPLFAVERAEGVYIQLKNGQ
                     QLIDGMSSWWSAIHGYNHPRLNHAATQQLSQMSHVMFGGLTHQPAVELAQQLVNILPE
                     SLDKIFFADSGSVAVEVAMKMAVQYQHAKGETQRYKFATIRSGYHGDTWHAMSVCDPV
                     TGMHSLFAKGLPVQYFLPQPPVKFGQAWQPEAMQPLQDLLAQHGDEIAGLILEPVVQG
                     AGGMYFYSPEYLVQAKALCEPYGILLIFDEIATGFGRTGKLFACEHANVVPDVMCIGK
                     ALTGGYLTLSATITNQAVADVICSGEAKCFMHGPTFMANPLACAVAAESIKLLLASPW
                     QQRIQQIEQQLRQELRQAEALDCVAEMRVLGAIGVIEMKAPVNMASLPPRFVQNGVWV
                     RPFGKLVYLMPPYIISSDQLSQLIHGTIRTLQEEYAHKESL"
     gene            8252..9139
                     /gene="psd"
                     /locus_tag="PXB09_001511"
     CDS             8252..9139
                     /gene="psd"
                     /locus_tag="PXB09_001511"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755522.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5233625.1"
                     /translation="MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAV
                     THFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADG
                     RISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMP
                     CDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITA
                     SMSTVWAGVINPPRPEKITTWAYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLA
                     SHLQVDSPVRMGEILAHQK"
     gene            9164..9718
                     /locus_tag="PXB09_001512"
     CDS             9164..9718
                     /locus_tag="PXB09_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5233626.1"
                     /translation="MSQQFFDQVSLESQLEVSAEAVAKGIFDVLNQNPPALELNEVSH
                     ALQTLQQQAKFKEIEAVGAQFLAENAQKAGVNTTESGLQYEVLVAGEGQIPAREDKVR
                     VHYTGTLIDGTVFDSSVKRGQPAEFPVNGVIAGWIEALSMMPVGSKWRLTIPHNLAYG
                     ERGAGASIPPFSTLVFEVELLAIL"
     gene            complement(9778..10101)
                     /locus_tag="PXB09_001513"
     CDS             complement(9778..10101)
                     /locus_tag="PXB09_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233627.1"
                     /translation="MNWKAVLIFSVLGSLVSCASYSEHAVQRIEAGKSFAVTGNTKRI
                     NTMACQDNDDWYLDGYRVGKSFREHQQKMLIQRTAYCEEQTGKAVPDKFRHSWNSGYQ
                     QGLKR"
     gene            complement(10125..11228)
                     /gene="proB"
                     /locus_tag="PXB09_001514"
     CDS             complement(10125..11228)
                     /gene="proB"
                     /locus_tag="PXB09_001514"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5233628.1"
                     /translation="MKIDKTLVVKFGTSTLTQGSAKLNLPHMIDIVRQLAQLHQAGFR
                     LVIVTSGAIAAGRHYLNHPQLPPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQIL
                     LTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIKVGDNDNLSALVAILV
                     QAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKI
                     SAADVATRSGIETIIAPGNRPNVIVDLAYGQAIGTKFSVQADRLESRKQWLYAAPSAG
                     IITIDAGAENAMLIQHKSLLPAGIVNVEGRFSRGEVVKIRTQQGKDVALGMPRYNSDA
                     LHLIQGKHSQDIEQVLGYEYGAVAVHRDDMIVL"
     gene            11394..12382
                     /locus_tag="PXB09_001515"
                     /pseudo
     CDS             11394..12382
                     /locus_tag="PXB09_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
     gene            12457..13104
                     /locus_tag="PXB09_001516"
     CDS             12457..13104
                     /locus_tag="PXB09_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL5233629.1"
                     /translation="MTINTYAKFAPTVFVAKCSESHTKGEIITLTSKYGNETEVQVHN
                     LVKQDGEHYFYSFTRCDGMDSQSFAQQKAERYQGYADNAAKRSQDWVNAANEGCDFLS
                     LGEPIKIGHHSEKRHRNLIERNARRMDNAVAEMNKAASYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKTKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            13128..13535
                     /locus_tag="PXB09_001517"
     CDS             13128..13535
                     /locus_tag="PXB09_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5233630.1"
                     /translation="MNRQGIYINGKQVFDSQGEDIQSIGFFGCNIQTVVGINKGSILV
                     SSNSNQLLVNGQSIELGSEPVLKIEVLGNVQKLSAGAADVSITGDAGSVDTVSGDVSI
                     KGNVASYVKTVSGDVRCRAITGSVETVSGDIYR"
     gene            13633..13983
                     /locus_tag="PXB09_001518"
     CDS             13633..13983
                     /locus_tag="PXB09_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233631.1"
                     /translation="MTTINLSQQERELVEFVWNNRNTPWFFHCSVSNVSRNNTSRQIA
                     VCVIKDNQLISLDELIAKLCGYKLRQNGLYVTVHNMDAVFDTLYRFMCKLNDEMEANE
                     NVCPYLSLAHYEVF"
     gene            14074..14436
                     /locus_tag="PXB09_001519"
     CDS             14074..14436
                     /locus_tag="PXB09_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233632.1"
                     /translation="MIDTFFDLDDTSCYLGNWEDILKEYDDCLSVEDFWHSAKEFDTV
                     PHFGNLYQERVILKLIARFCIELNIEQDSGLVEFDYYINAIDTHFYINSQRICDIDDW
                     NEMLDKIREEMTPAKLVA"
     gene            14549..14809
                     /locus_tag="PXB09_001520"
     CDS             14549..14809
                     /locus_tag="PXB09_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233633.1"
                     /translation="MTFELGRVCATRAVAECFNQHTLVDLLHRYCSGDWGNLCDNDKK
                     ANVKAIERGGRILARYDVEDETLYVITEADRSYTTILFPYEY"
BASE COUNT         4296 a         3217 c         3082 g         4296 t
ORIGIN      
        1 ctagcattct gaaagggaac gccacttttg tgggaatgcc acctaaaccc tctaccatct
       61 cagtgaagca tcattgagat ttcattttac ttccacctcg cggggaacat ttttcccgtg
      121 ttgggcaagg atgtttctcc gcttttttac atttggagaa acaaactatg acaactcaaa
      181 cttctactca aaaaaattac ttcaaccttc atacaacagg cattggctat ctaaacgata
      241 ttcgtttggt agagcctaaa aaaggaaatc ctttttatgc ctgccgtata gcagctctgg
      301 ttggcgaatc tgactctcct gagtacagat attttgatat gaatgtagtc ggtaaagaga
      361 ctgaaacact tatcaaaaga tgccaaaaag cagttagtga agagaaaaaa gtgcttgtgt
      421 catttgtaat ggctgatttg tggttcgata catttactta ctcaacagat agtaaattcc
      481 acaaaaaagg cgataccggt gtatctgtaa aaggtcgctt aatccgcatc aaaatgatta
      541 aaattgatgg ggaaatagcc taccaagaaa agccaaaatc agatgagcaa tctgagtaat
      601 tttacctaag cccgacattt tatgttgggc tttattactc gatgtacaag atttgcgcgt
      661 aacttttaag accccagatg gcgatgttac tgccgtcaat gatctgactt tttctttaaa
      721 tgccggtgaa accctcggca ttgtcggcga atctggctca ggaaaatcgc aaaccgcttt
      781 tgctctaatg gggctattag cagataacgg gcgaatttca ggatcagcaa aatttaatgg
      841 acaagaaatt ctcaacttgc ctgaaacaca acttaaccgc ttgcgtgctg aacaaattgc
      901 gatgatcttc caagatccaa tgacctcgct gaacccttat atgaaaatcg gcgaacagct
      961 aatggaagta ctgatgttgc ataaaggcat ggatcataaa actgcgtttg aagaatcggt
     1021 acggatgtta gatgcggtga aaatgccgga gtcacgtaaa cgtatgaata tgtatccgca
     1081 tgaattttcc ggcggtatgc gtcagcgtgt gatgattgcg atggcattac tttgccgtcc
     1141 gaaactcctc attgcggatg aacccacaac tgcgctcgat gtgacggtgc aagctcaaat
     1201 catgacctta ttaaacgaat taaaaagcga gtttaatacc gccattatca tgattactca
     1261 cgatctcggt gtggtcgcag gaatttgcga taatgtgttg gtgatgtatg taggcagaac
     1321 catggaatac ggcaccgctg agcaaatttt ctatacccca agccaccctt attctatcgg
     1381 cttaattggt gcagtgcctc gcgttgacgg acaggaagaa gaactcatta ctattccggg
     1441 taatccacct aacttattac gcttaccgag tggctgtcct ttccaaccac gttgcgttca
     1501 tgcaactaaa cagtgcctca aagcaccggc gttaaccttg ttaaatgatc aacgtttacg
     1561 cgcttgtttt gtccctgccg agcaattaat ccgaggtaac gcatcatgaa cacagagaaa
     1621 aaagtgatcc tagaagtgaa ggatttaagc gttcatttca acatcaaaga tacgaaatct
     1681 ttattctttg ctaaacacca aactttaaag gccgtcaatc atgtctcttt tcagttatac
     1741 gaaggcgaaa ccttaggtgt ggtcggtgaa tcgggctgtg gaaaatcaac tctcgcacgc
     1801 gcgattattg gcttagtgga aagctctggc ggtaatattt tatggctagg taaggagtta
     1861 actcaacaaa gtgcgaaaga atggaaaacg atccgtagcg atattcaaat gattttccaa
     1921 gatcctttag cctccctgaa tccacggatg accattggca gtatcattgc cgaaccatta
     1981 aaaatttacc aaccccattt aaccgcggaa gaagtgaaag aaaaagtacg cgcgatgatg
     2041 atgaaagtgg gcttattacc taacttaatc aatcgctatc cacatgaatt ttcgggtgga
     2101 caatgtcagc gtatcgggat tgcgcgcgcc ttgattgtgg aaccaaaact cattatttgc
     2161 gatgagccag tgtccgcctt agatgtttca atccaagcac aagtagtgaa tttattgaaa
     2221 tctttacaac gcgaaatggg gctatcattg attttcattg cacacgacct tgctgtggtg
     2281 aaacacattt ccgatcgtgt tttggtcatg tatcttggta acgcggtgga attaggtgac
     2341 tatgaacaag tctatcacga tactaagcat ccttatacca aagctttgat gtctgcggta
     2401 ccgattcctg atccgcaatt agaacgcaat aaacaaattc aattgcttga aggcgatctc
     2461 ccttccccga ttaatccgcc gtcgggctgt gtgttccgca cccgttgccc actggcagat
     2521 caacactgta ttgcagacaa accgctcctc aaaggacgag ataatcacgt tgttgcttgt
     2581 tttaaagccg agtaatacac acaaccgcac aaaaaagtgc ggttgttttt ttgcgaatat
     2641 tcacagtcag actttcgtga tactttcgct ctgagataag gattacgata cagagaagtt
     2701 attcaacaat cacacgtgca ttgatcggtt gcactggacg attattgtgt cctttcatca
     2761 aggtcgcaaa cgcctcaact tgagattggc taatgttgtc atagtgtttt aacactaacc
     2821 aatttacacc ttcagaacaa ggtggtgtag ttaatgaccc gctgaaacga tagtaatcgc
     2881 gttttttcgg aattaatgtt gctgggtcaa aagcggtact aagcgtatat ttctcccctg
     2941 ctttttgcgg gaagttttgc caaattgggg ctaaccattg gttttcactt gataatacat
     3001 agagcacgcc aagcacagca agattccctt cattgtctgc gtgtacaaaa tgtgcttcca
     3061 tcgggaagga tttacctcaa attaagtttt cactcggcac atggaaatgg aattgtttaa
     3121 gggtaaaagt ctttccatta agctgcatgc gattacttgc ctctttgaaa tccacttgaa
     3181 tagtatgccc attattgaca atctccacat tggaaggtcg ataatccagc ttaatcggcg
     3241 ctaacttacc atcaatcgta tgcttgatat ctattggtgt ttggttttta ccttcgccac
     3301 aaatacggaa tttgggtgaa agttcagccc aatgttctgg cgattcgtgt ccggtgtatc
     3361 cccaatgcgt gtgcgtttct tctttcttaa gggggcttgt acacgctgtc aatgctaatg
     3421 cacctaacgt aagcacaaaa aggtttgatt ttttcatagc ctagctcctg attaaaagag
     3481 atgaattgat gagacaacct aaactcaatg atgccttaat ccgagacgct ttcatcttag
     3541 gcaaaacaac actccatttc aagtataact tgctcaagaa tatatcttag accgaaatca
     3601 aatccattat ttcaaataag gtattaggcg agtatttctc taaataacga cgtaaaaaat
     3661 gttgtgtttc ttggctaatg acttgatctg tttccggata caagttgtat atcacagcat
     3721 gcacacttac tcttttggag ttgagtactt gtaaactcaa taaggtatga ttaatactac
     3781 ctagcttgcc agaggtaact aaaatcacgg ggtattgatg ctgacaaaga taatcaaggg
     3841 tggtttcttc ctcattataa ggtacacaca agccgcccgc cccttccaat aatacataat
     3901 catatttttc acacaaaagt gcggtgcagg tttcaatttt tttacgttcg atcgtgcgcg
     3961 gttctaattt cgcggctaaa tgcggtgagc aaggataatc aaacacgtaa ggacaagtga
     4021 taccttgctt atcttcttct gtaagctcaa taccttgtat ttttcggtgt atgagtaaat
     4081 cttcggcaat tcctcggcag cctgtttgga tcatcttttg cgtgatgaca cttgcgcctt
     4141 gttgcatcag tttcttggcg taccaacctg tggcgatggt tttgccaata tcggtgtcga
     4201 tgccagtgat aaaaaaaacc tttgccatac tttttccttc taagattaag ttaaacgcgc
     4261 cagcacatac atcggcgtgt aagtgagttc tactttgtgt tgtgcgttac ggtaatgttg
     4321 ttgatattgt tggcaaaagg cgtgcaattg cccttttgtc cacctttgct gctgtgtggc
     4381 agtaacgcct gtttgtttca aatgttttaa caccgctaag ggatcatcaa agtgcaacac
     4441 aatctcctcg tgttcgaggg ctaaaatctc aaattcaggc actagccact tttgccagtc
     4501 ctcaagacgt ggataagtta accccacacc ggtgaggtgt ttgatctgtg ttaaattctc
     4561 gggcgtgaaa gtactgaata acaaaaatcc gtgctttttt aagcgcactt tacaacgcgc
     4621 aataaaaccc gctttatctt caaaccattg caccacggaa gcactggcaa tcaaatcata
     4681 ctgctgcgga aagggaagtt gttccgcatc gccacaatgg aagtgaaaag gttggggcaa
     4741 cactgattgc agatgctctc gcatatcgca aaggtcattc agctcccagt gttcaacctg
     4801 caactgtgac attaattgct tcgttaatcc accagtacca catccaatct ctaatgcacg
     4861 ttggaatgct tgtctgtcga tatacgacaa taaactaagc aaacgttggt gaatctgctg
     4921 ttgtgctctc gcttgctgat catagttcga tacagcggca gaaaaacgct gtttaatgcg
     4981 tcctttatca atacgatcca tgtgctacaa ccaacaagtt tcccaatggg tgaagtgagg
     5041 aaacaacaaa tgctcccctg cgatttctgt tattgcacaa cgatcctgcc aataagcccg
     5101 ctgattttgt gcagggaaaa ttttatcttt tgagccgaca atcgccttgc tccacgagat
     5161 taaatctgta cggtgatctt gttgtaaaaa ggtataaagt gcggtcagtt cagcatgaat
     5221 ttcctgtaat gtgggacgca tggaatagtg ctgataatct cttaacagcg tttttgaacc
     5281 acaaatacga cgttcaaatt tagtccgatt atcttcattt aaaccagata acgtgccagc
     5341 aaaaatggct tcgggaatac catattggtc atcacaaggt aagcccgtgc cattgatcgc
     5401 cgtagcagat agcagtggat aaccttgcat cacacgctcc gctacccaca cgcccattga
     5461 ccatgccacc acgcgaatat gttgataagc ggaaaaatca acatcgcaat gcagatctcg
     5521 ataatcatag caaaggcata aatcataatt ttccggcaga atcaggtgct cgaccacgct
     5581 cggcggtgtg ccccaccctg caaaatagac gatcagattg tcgccttgct gtgaaatatg
     5641 ttgtgttttc attcagcaag ctcccgtaaa caagcaataa attgttccac ttccgccact
     5701 tgcatatctg cagtcagtga aaaacgaata cgagaggttc cttttgggac tgtcggcggg
     5761 cgaatcggta agcaataata gccttgttgt tgcaaacgtt gcgccgttct tactgtcagt
     5821 tcgttatcgc ccaaaatata aggtacgata caactttcac ttggcatcgg gacttgaaaa
     5881 atgtcaacaa tcgcttggcg taaatgttga ctaagctgag caagatgtgc gcgttcggct
     5941 tgcaaatgtg gtaattgttg aaagacaaaa tgcgtccatg ccacattaaa cggcggaagt
     6001 gccgtggaaa aaatcaatgg gcgcatttta ttaaccaaat aatctcggat cacttgatcg
     6061 caaatcacat aagcccccat agagcccaac gccttgccaa acgtaccgac taaaatatca
     6121 atttggttga tacagccttg ttgttctgct aaccctagcc ccttctcccc caatacgcct
     6181 atcgcatggg cttcatctac atataacatc acttgcggat agcgctgttt taatgcgacc
     6241 aactgggtga ggtctgcaca gtcaccatcc atactaaaca cggattccgt gaccacgata
     6301 atccgctcaa aagtgcgatc atttttttgc aaaatttgtt caaggtggac gtaatcatga
     6361 tgacgaaaac gcacaaactc acattgtgcc aagcgaatgc catcaatcat actggcatgt
     6421 accagtttat ccgccacaat cagcgttttt ttgtccgcta aagcaggcaa aatcccaata
     6481 ttagcatgat aaccgctatt aaatagcaag gcagtttctc gtccaaatgc ctgcgccatt
     6541 aagctttcta gctcatcata aatcggaaaa gagcctgtta ataaacggga ggaagaagaa
     6601 gtcaatgcag ggagttgatc ttggtattgc gtgaaaaatg cctgacgcaa ggcttcgtta
     6661 ttggctaaac ctaaataatc attggaggac atattcagca tcgtattgtc ctcacgttga
     6721 ataaaacgcc ctcggtgaat tagttggggc agttggcgaa attgattctg cgcctttaaa
     6781 tcagctaact gctgctgata atacctgatc atagagattc cttatgtgca tattcttctt
     6841 gaagggtgcg aattgtgcca tgaattaatt gagacaattg atccgatgag atgatatacg
     6901 gtggcatcaa atacactaat ttgccaaatg gacgcaccca aacgccattt tgcacaaagc
     6961 gtggtggtaa acttgccata ttgacaggcg ccttcatttc aatcacccca atcgctccaa
     7021 gtactctcat ttcagcgaca caatctaagg cttccgcttg gcgcaattct tgacgtaatt
     7081 gctgttcaat ctgttgaata cgttgttgcc aagggcttgc caataacaat ttgatacttt
     7141 ctgctgctac cgcacacgcc agtggatttg ccataaacgt cggaccgtgc ataaaacatt
     7201 ttgcctcgcc agaacaaatc acgtctgcta ccgcttggtt ggtaatggta gcggatagag
     7261 ttaaataccc ccccgttaaa gctttaccga tacacatcac atccggcacg acattggcat
     7321 gttcacaagc aaataatttg cctgtacgcc caaatcctgt ggcaatttca tcaaaaatca
     7381 gcaaaatgcc gtacggttcg cataaggctt ttgcttgcac caaatactca ggggaataaa
     7441 aatacatacc acccgcccct tgcactaccg gttctaaaat taaacccgca atctcatcac
     7501 catgttgtgc caataaatcc tgtaacggtt gcatcgcttc gggttgccaa gcttgcccaa
     7561 attttaccgg gggttgcggt aaaaaatatt gcacgggtag ccctttggca aacaagctgt
     7621 gcatgccggt cacgggatca cacacggaca tcgcatgcca agtatcacca tgatagcccg
     7681 aacgaatcgt agcaaattta tagcgctgtg tttcgccttt agcatgttga tattgcactg
     7741 ccattttcat cgccacttcc acggcgaccg aaccactatc ggcaaagaaa attttatcca
     7801 aactttccgg caagatgttg accagttgct gcgccagttc taccgctggt tggtgcgtta
     7861 atccaccaaa catcacatga ctcatttgac tcagttgttg cgtggcagcg tggtttaaac
     7921 gggggtgatt atagccatga atcgctgacc accacgatga catgccatca atcaactgct
     7981 gaccgttttt taactggata tacacacctt cggcacgttc tactgcaaat aagggaaaat
     8041 ccgcatttaa cgccgcataa gggtgccaaa tatgttgtcg atcacattct aaaagttgct
     8101 gctcattcat cgtttcacct cggttgtgaa tcgccctttc aactggcgta aattcacgca
     8161 aatacttaca taaacggaat aacttgttat aatcgccaag catttggctt ttcaagccca
     8221 ttattctaac ttaaaaagat gatttattac tatgaatata ttagaaaaaa aagcacaact
     8281 gagttactgg caacggatta aaattgcctt tcaatatgtg atgccacaac tttatttaac
     8341 acgtcttgca ggctggtttg caaaacagca atggggtgct gtcacacatt ttgtgattaa
     8401 attattcgcg aaaaaatacc atgtggatat gagtgaagct gcaaaaccaa atttcagcga
     8461 ctatgcgagc tttaatgaat tttttatccg tccattagcg gacaatgccc gtccaattaa
     8521 tcaaaatcct accgcacttt gtttaccggc agatggtcgt attagtcagt taggacacat
     8581 tgagcaggat ttattgctac aagccaaagg acattatttc agcttgaacg atttgttagc
     8641 tggcgacgag gcgctcgctc atcattttaa agatggcgaa tttgccacca cctacctctc
     8701 accacgcgat taccaccgtg tgcatatgcc ttgtgatgcc accttatgca aaatgattta
     8761 tgtgccaggt gacttattct cagtcaatcc atttttagcc gaacacgtgc caaacttatt
     8821 tgcacgtaat gaacgcgtga tctgcgtatt cgataccgaa tttggtaaaa tggtccaaat
     8881 tttagtcggc gcaaccatta ccgcgagtat gagcaccgtg tgggcaggtg tgatcaaccc
     8941 gcctcgtcca gaaaaaatca ccacctgggc ctatgaagga gaaagtgcgg tcaaattact
     9001 gaaaggacaa gaaatgggag cctttcaatt gggctcgacg gtgatcaatt tatttgaaaa
     9061 agatcgtgtg caactggcat ctcatttaca agtggatagc ccggtacgta tgggtgaaat
     9121 tcttgcccac caaaaataat ttttaaccac aataggaaaa acaatgagtc aacaattttt
     9181 cgaccaagtg tcattagaaa gccaacttga agtgagcgcc gaagccgtcg cgaaagggat
     9241 ctttgatgtg ttaaatcaaa atccaccagc acttgagtta aatgaagtga gtcatgccct
     9301 acagactttg caacaacaag cgaaattcaa agaaattgaa gccgttggtg cacaattctt
     9361 agctgaaaac gcgcaaaaag cgggggtaaa tactacggaa tctggtttac agtatgaagt
     9421 gttagtggct ggtgaagggc aaattccggc acgcgaagac aaagtgcgtg tgcattacac
     9481 tgggacatta atcgacggta ccgtctttga cagctcagta aaacgtggtc aacctgcaga
     9541 attcccagta aatggcgtga tcgctggttg gattgaagcc ttgtccatga tgccagtggg
     9601 ttcaaaatgg cgtttaacca ttcctcacaa cctcgcttat ggcgaacgtg gtgctggtgc
     9661 ctccattccg ccattcagta ccttagtgtt tgaagtcgaa ttattagcca ttctttaaag
     9721 ctaaacgcta gacataaaaa agtgcggtca ttttccgcac ttttttatgt ctagcgttta
     9781 tcgtttcaag ccttgctgat agccgctgtt ccacgaatgg cggaacttgt ccggcacagc
     9841 cttgcccgtt tgttcttcac agtaagccgt tcgttgaatc aacatttttt gttggtgttc
     9901 tcgaaatgat tttcccacac gatagccgtc caaataccaa tcatcattat cttgacatgc
     9961 catggtatta atccgttttg tattccccgt cactgcaaaa gatttgcctg cctcaatacg
    10021 ttgcaccgca tgttcagagt atgaagcaca gctcaccagc gaacctagta cactgaatat
    10081 caatactgct ttccaattca tcttgttacc tttctttttc tgatttataa cacaatcata
    10141 tcgtctcggt gtaccgcaac cgccccatat tcataaccga gaacctgttc gatatcttgc
    10201 gaatgtttgc cttgaattaa atggagcgca tcgctgttat aacgtggcat ccctaaggca
    10261 acatccttgc cttgctgagt acgaattttt accacttcac cgcgtgaaaa gcgcccttcc
    10321 acgtttacaa tcccagcagg caataacgat ttatgttgta ttaacatcgc gttttccgcc
    10381 cccgcatcaa tggtaataat accggctgac ggcgccgcat atagccattg tttacgactt
    10441 tctaagcgat ctgcttgcac actaaatttg gtgccaatgg cttgcccata agctaagtcc
    10501 acaatcacat tcgggcgatt acccggtgca ataatggttt caatgccgga gcgggttgcc
    10561 acatccgcgg cactgatttt ggtggacatg ccacctgtgc ctaacgaggt gccacttccg
    10621 cccgcaatcg cgcgaatatg atcggtaatt ttgtccacgt cggcgatcaa tttggcgtct
    10681 ggatgtttgc gcggatcacg atcaaataaa ccttgctgat cagtaagcaa atacaactgt
    10741 tctgcttgca ccaaaattgc cactaacgcg gataaattat cgttatcgcc tactttaatt
    10801 tctgacgtag cgacagcgtc attttcatta atcactggaa taatctgatt gtctaataag
    10861 gcgcgcaaag tatctctggc atttaaaaaa cgttcacgat cttcaatgtc ggcacgggtc
    10921 aataaaatct gcccaatatg aatatcataa atggcaaaca atttttccca cgtttgaatg
    10981 agctgacttt gtcctaccgc agccaataat tgtttcgagg caatcgtcgg tggcaattgc
    11041 gggtgattta aataatgacg acctgccgca atcgcccctg aggtaacaat cactaaacga
    11101 aagcccgctt gatgaagctg tgcgagctga cgcacaatat ctatcatatg aggtaaattt
    11161 aacttcgccg atccttgcgt aagcgtactg gttccaaatt ttacaacgag tgttttgtcg
    11221 attttcatct tctctatctt cttatttttg tcgcacaaaa ttgaagctaa cttaccatta
    11281 atcatcagaa aaatcatctc gtttacttgc tattttctat gatttagcac aaattttttc
    11341 tcactaaaag gcatataata aagcttcttg atttttcagc taggaacccg attatgacct
    11401 caacctcttc acaagaaacg gagcggcaac gagaaatcac tcgcctttgt gttcaagttg
    11461 cccaactctt atacaacatg gtgcagaaag tgccatcgtt gtgcaaatgg cacatcgctt
    11521 aggcttagcc ctcggtgtag atagcgtaga atgtgccctc acgccaaatg ccattattct
    11581 tactacatta gcccaagacc attgcatcac gacagtccgt aaaaaccaag acaaaggaat
    11641 taatatgcaa gtggttaccg aagtgcaacg tattgtgatt acagcagaac gtaaaatcta
    11701 tgatatgcaa caagtgcatg ccaaactggc tcgcattaaa ccgcttaaat acaatcgcta
    11761 ttttgtgatg ttgatgattg gcgtatcctg tgccagtttt gctcatttat ctggtgggga
    11821 cgcactagtt tcattggtta catttctcgc cgcaacactc gccatgtatg ttcgccaatc
    11881 acttgccgca agacactata accccttaat tgtatttgcg gtgaccgcct ttgtcgcctc
    11941 actaattgcg ggtatcgcgt tgaaatataa catcggcaat cagccccaaa ttgccttggc
    12001 atccagcgta ttattgctcg ttcccggctt tccactgatt aatgcactcg ccgatatttt
    12061 aaaagggcat atcaatatgg ggattgcccg ttgggcactc gcgacaatcc tcacatttgg
    12121 ggcatgctta ggcattgtat ttgcgctgag tttattctta gaggaaatct gtatgctaaa
    12181 taaattcatt caagatgaat ttctacggct agatcaacgt tatgcagctt ggtatcaaag
    12241 tgaagaaacg gatgaagttg ccagaatggg gattcaagaa agtgagcgga ttttgaaaat
    12301 tctgtatgca ctgaaatata acgaagaccc tatgcaaaat ggtttaggct atattgcatt
    12361 tatggcatca aaaggccaat aatttactta tctcaacaat ttacccaccg gggaaactcc
    12421 tcgatggcgt ttcccctact ttataggaga aacgctatga ctattaacac ttatgcaaaa
    12481 tttgcaccta ccgtttttgt tgcaaaatgc tctgaatcac ataccaaagg tgaaattatt
    12541 acgctaacca gcaaatatgg taatgaaacc gaggttcaag tacataatct tgttaaacaa
    12601 gatggcgagc attattttta ttcatttact cgttgtgatg ggatggatag tcagtcattt
    12661 gctcaacaaa aagcagaacg ctatcaaggc tatgcagata atgcagccaa acgtagtcaa
    12721 gattgggtaa atgccgctaa tgaggggtgt gattttttga gtttaggtga gccaataaaa
    12781 attggtcatc acagcgaaaa gagacaccgt aaccttattg aacgtaatgc tcgccgtatg
    12841 gacaatgcgg ttgcagaaat gaacaaagct gcaagttatg aatctcgtat cgcatattgg
    12901 gaaaaaatgg caggaaaaat tgacctgtct atgccggaaa gtctggaata ctttaagttt
    12961 gaattggata aagccaaaac aaagcacaaa gaattgaagg acaaccccga gaaacgagag
    13021 catggttatt cactgactta tgctaaaaaa gcagttaatg aacttgagaa aaaagtaaaa
    13081 ttagctgaat tactttgggc ataattattt acaaaggaga tgacgatatg aatcgacaag
    13141 gtatttatat taatggcaaa caggtgtttg attcacaagg cgaagatatt caaagcattg
    13201 gattttttgg ctgcaatatt caaacggtcg taggcataaa caaaggaagt attttagtct
    13261 cgtccaatag taatcaatta ttggtgaatg gacagtcgat tgaattaggt tctgagccag
    13321 tcctcaaaat tgaggttttg ggcaatgtgc agaaactgag tgccggtgcc gcagatgtct
    13381 ctattacagg agatgccggc agtgttgaca cagttagcgg tgatgtctct attaagggaa
    13441 atgttgcctc ttatgtgaaa accgtgagtg gtgatgttcg ctgtcgtgct attaccggtt
    13501 cggtggaaac cgtctccggt gatatttatc gctgatattt actcatctta ttatttacca
    13561 ccctattggg aagcaatttt cccaaggtgg gcagattgtt tcccattttt attttgaatt
    13621 tggagaaaca tgatgaccac tattaacctt tcacaacaag aacgtgagtt agttgaattt
    13681 gtctggaata accgtaatac accttggttt tttcactgta gtgtatcgaa tgtgtcgaga
    13741 aataatacct ctcggcaaat tgctgtatgt gtcattaagg ataatcaatt gattagcctt
    13801 gatgaattga tagcaaaatt atgtggttat aaactcagac aaaacggatt atacgttact
    13861 gttcataata tggatgctgt ttttgatacc ttatatcgct ttatgtgcaa gctaaatgat
    13921 gagatggagg caaatgaaaa tgtttgccct tatttatcat tagctcacta tgaagtgttt
    13981 tgattggtat cagaactatc caccctgtcg ggaaacaatt tttccgatag ggcagattgt
    14041 ttcccacttt tattttgaat ttggagaaac ataatgatag acaccttttt tgaccttgac
    14101 gacacctcat gctatttagg taactgggag gatatactga aagaatatga tgattgtctt
    14161 tcagttgaag atttttggca ttccgctaaa gaatttgata ccgtacctca ttttggcaac
    14221 ctataccagg agcgtgtcat ccttaagttg attgctcgat tctgtattga gctgaatatt
    14281 gagcaagatt caggtttagt cgaatttgat tattatatca atgcaataga tacgcatttc
    14341 tatattaata gccaaagaat ctgtgatata gatgattgga atgaaatgtt agataagatt
    14401 cgtgaagaaa tgacgccggc taaattagtt gcctaatttt tgcaaatttt tactaaaaat
    14461 gacgcttact gtcgtcttaa ttcacccact tggggaaata tctccccaat gggatgacat
    14521 ttcccctctt tctgtttagg agaaatgtat gacttttgag cttggtagag tatgtgcaac
    14581 tcgtgcagtt gctgaatgtt tcaatcaaca tacattagtt gatctacttc atcgctactg
    14641 cagtggtgat tggggaaatt tgtgtgataa cgacaagaaa gccaatgtga aagctattga
    14701 acgcggagga cgcattttag ctcgctatga tgtggaagat gaaacacttt atgtaatcac
    14761 agaggctgat cgtagttaca ctacaatttt atttccttat gaatattaat ggagcttcca
    14821 tttataccct acatttttat gttatcaaac gccgtcaaat gatggcgttt ttctatttta
    14881 tatctttcga t
//
LOCUS       DANLTI010000065        14823 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.065, whole genome shotgun sequence.
ACCESSION   DANLTI010000065 DANLTI010000000
VERSION     DANLTI010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14823
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.065"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..124
                     /locus_tag="PXB09_001521"
     CDS             <1..124
                     /locus_tag="PXB09_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL5233634.1"
                     /translation="LNKSNHIEVVALRVNVDNPAYIESYELLEKLGVQIVDIRE"
     gene            126..911
                     /locus_tag="PXB09_001522"
     CDS             126..911
                     /locus_tag="PXB09_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL5233635.1"
                     /translation="MKKYLISLEKDVKRRELFFSQPNTEDFEVFSAINTMSSDWEALN
                     NHFDLALFEQRYGRKTTKGEVGCTLSHLAVYQKIAEDSTIAEDDYCLVCEDDALFADD
                     FQKHLDALLAQNLKVDIILVGQSKIPTFNDSELELNYPSTFGFLQKNIPNSQYKYAYS
                     YLNYFAGTVAYLIKKSTACQFLAQCAGKNPYWLADDFILFEKNFKFDVLIVRPLMAIE
                     NPVLISNLEDLRGSLNNNLFKKAVKYPLKKLLAIKRNFTQRNS"
     gene            922..2109
                     /locus_tag="PXB09_001523"
     CDS             922..2109
                     /locus_tag="PXB09_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233636.1"
                     /translation="MSALINLFYLYDPWFFHFLRMSFVVGLVACGYLVFQIIKGKSNG
                     IIIPKDSLIAIIALIGFSIIPLLINSTKEIGVLAMYVKMLILFVFGIAIYNVFYHNQQ
                     GKTLFVRDLKIGIAIQWICGVTALLGLPFMVDFLLSSNAMMPRFFGSEQEYRLYNITS
                     SAFFQLSIFYLMLLHFLLAYNKKTDVVNEWFLFLLLCVGLISGRTFLLMSVISIALYF
                     KWKYILPLIAFTALILFLAIVFPENRYVEHALEPVINLLSGTGKVSSSTDNLVKNHLF
                     LPTLNQFISGDGLYYTETGGYYGGSDSGYIRQVLYGGVSYMLACFAFTYYFVRKVAVN
                     WFEGSWIFTLSTIGILAILNIKADTFAFPGLMMLFLMFLSLFGTSGRNVTFFCKNKEA
                     EYV"
     gene            2102..3067
                     /locus_tag="PXB09_001524"
     CDS             2102..3067
                     /locus_tag="PXB09_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5233637.1"
                     /translation="MFSIIVPSYNRNQEINALLESLKQQTAYNFEVIIVDDCSKIPVS
                     ETLGILNEFNDISTKEKVRELLTRDSLSHIYSYPFDVKVVRNNPNVGAAQSRNVGATN
                     ATQEWLLFLDDDDRFMPEKCERLAAEIANNPTANFVYHPAKCEMVNEGFTYVTKPFKH
                     KSELTKENILKANKIGGMPMIGLKKSLFCKIGGLSDRLRSLEDYDFLLKLLEEPSFEP
                     LYVDEALTYCTFHTKRSSVSTDTTNTEKAIEYIQQTYIKTPEANNFKLNSLYILSYPH
                     VMNLSRKAAGYYFEMFKQTKNIKQLIIALVIFISPKLAINLKRFM"
     gene            3067..3867
                     /locus_tag="PXB09_001525"
     CDS             3067..3867
                     /locus_tag="PXB09_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5233638.1"
                     /translation="MKFSVLMSLYIKEQPQYLRECFESLKVQTVQADEIVVCFDGAVT
                     PELEAIVEEYSAILPINAVKFPQNRGLGKTLNDGLTYCKNEWVFRMDTDDICMPERFE
                     KQVAFIEQNPETVIFGGQIAEFGQDIHDLVAYRNVPTTVEEIVRFTRLRCPFNHMTVA
                     YQKSKVLEVGGYQDLQEDYYLWIKLIAQFKQVANLPDLLVYARVGNGMVGRRRGMAQA
                     EAEWRLYKLKNRCQIHDPISGFGIFIMRAIPRLLPVSALKKVYGLLRK"
     gene            complement(3904..4410)
                     /gene="msrA"
                     /locus_tag="PXB09_001526"
     CDS             complement(3904..4410)
                     /gene="msrA"
                     /locus_tag="PXB09_001526"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5233639.1"
                     /translation="MQNIREIYLAGGCFWGVESFMQRIKGVIKAQSGYANGNTDNPSY
                     QEVCAGSGHAEVVKVTYDANQISLAKLLDYFFKVIDPVSINKQGGDIGIQYRTGIYYT
                     DPQDEPVVTAALAQLQTQFDQPLAVENQMLEQYFPAEEYHQEYLVKNPNGYCHIDIQL
                     MNEILKNQ"
     gene            4591..5853
                     /locus_tag="PXB09_001527"
     CDS             4591..5853
                     /locus_tag="PXB09_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDL5233640.1"
                     /translation="MGTLNSFLGIIVLLFIAFLFSSNKRAINVRTVLGALALQVAIGA
                     LVLYVPAGRDALNAMATGVSKVISYGNEGISFLFGGLVSDKMFEVFGGGGFVFAFRVL
                     PVIIFFSALISLLYYIGVMQWVIRILGGLLQKALGTSKAESMSAAANIFVGQTEAPLV
                     VKPYISKMTESELFAIMAGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAK
                     IMVPQTEKFRDELEAVDLEKPANILDAAASGASSGMQLALNVGAMLIAFVALIALVNG
                     ILGGIGGWFGYDTLNLGQIFGWVFKPLAWVIGVPWEEAEIAGQMIGLKLAVNEFVGYL
                     EFAKYLAPESTVHLTDKTVAIITFALCGFANFSSIAILIGGIGAMAPSRRGDIARLGI
                     KAVIAGSLANLMSATIAGLFIGLGGAVL"
     gene            5998..6774
                     /gene="deoC"
                     /locus_tag="PXB09_001528"
     CDS             5998..6774
                     /gene="deoC"
                     /locus_tag="PXB09_001528"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDL5233641.1"
                     /translation="MNLKKSAEIALSLMDLTTLNDNDTDEKVIALCQQANTKFGTPAA
                     ICIYPRFIPIARKALKQQGIEQVKIATVTNFPHGNDDIEIAVAETKAAVAYGADEVDV
                     VFPYKALIAGNEQIGFDLVKQCKAVCAANNVLLKVIIETGELKSAELIRKASEISIQA
                     GADFIKTSTGKVAVNATLESARIMLETIRDLGVADRVGFKAAGGVKTSEEAAQYLALA
                     ESILGNDWVSASHFRFGASSLLANLLATLNDEQQQAVQGY"
     gene            6795..7514
                     /gene="deoD"
                     /locus_tag="PXB09_001529"
     CDS             6795..7514
                     /gene="deoD"
                     /locus_tag="PXB09_001529"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDL5233642.1"
                     /translation="MATPHINAPEGAFADVVIMPGDPLRAKYIAETFLEDAKEVTNVR
                     NMLGYTGTYKGRRISVMGHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRNDVKVR
                     DIVIGVGACTDSKVNRIRFRDNDFAAIADFDMTLAAHQAAKAKGIEARFGNLFSADLF
                     YSPDVEMFDVMEKYGILGVEMEAAGIYAVAAEYGAKALAICTVSDHIRTGEQTTSEER
                     QLTFNGMIEIALESVLIGDKQ"
     gene            complement(7590..8441)
                     /locus_tag="PXB09_001530"
     CDS             complement(7590..8441)
                     /locus_tag="PXB09_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDL5233643.1"
                     /translation="MQTHRAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQ
                     DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLD
                     FDLIAKIITQLPPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILN
                     ELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG
                     FYAHFKSVTSMTPLQYQKSLRLNAAREKLQAGVSVSETAYQVGYESPSQFSREYKRQF
                     GESPKGR"
     gene            8556..8987
                     /locus_tag="PXB09_001531"
     CDS             8556..8987
                     /locus_tag="PXB09_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDL5233644.1"
                     /translation="MKIFYHTSATATGGRDGRTQVDDGSIGFDLVGFQNESGKVGTNP
                     EQLFAMGYAACFDSAMNHVAPTLGIKPTKSSTTVAVGIGQKADGAFGLDLDITITVEG
                     ISAEEAKTLISKAHEVCPYSNATRGNVDVRLHVKVVSEFDL"
     gene            9004..9684
                     /locus_tag="PXB09_001532"
     CDS             9004..9684
                     /locus_tag="PXB09_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDL5233645.1"
                     /translation="MKMLDFETTVKTRQSIRKFLPLPMTETEIKQILADAQNAPSACN
                     TQPWLVHVASGETLARLKARFKKTFEAGINDADFEFNQTKFTGDYEPRWRNQYSHVFT
                     TSYGIPREDKAGRQVVYDDNIVGYGAPHMAFLFMPSIDGHDVNIASDVGMYSQTFLLS
                     LTARGFGGIPQLALAMFAKDVREELGIPEHYKLLHAISFGHPDWDAMQNKHHLGRVPV
                     EESATLHW"
     gene            9748..10872
                     /locus_tag="PXB09_001533"
     CDS             9748..10872
                     /locus_tag="PXB09_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDL5233646.1"
                     /translation="MINLFTPYTLNNDVEIKNRLVVAPMTHSASNDDGTISEQERHFL
                     HNRAADMGLFITAATGVMRNGKAFYGQPEALDERYLASLTETANILKNQGTKAILQIF
                     HGGAQAIPALLDGANAVAPSEHANGAKALTADEVKQMIQAFANATDLAIQAGFDGVEI
                     HGANGYLIQQFFSTEFNQRTDEWGGSLEKRLRFPLAVVEAAVSVREKHQRPDFIIGYR
                     FSPEEPGEHGLTMTDTYALIDALCEKPLQYLHISLWDFGKKARRGADTNFTRMQLVHQ
                     HINGRLPLIGVGNLLTGEQIRKAYATGWAEFIALGKAVMLNPNVATLLKDNRDSEIVS
                     ELDPQQADHYGIPDRLWGYCVQGGAWLPPLKGQNGQPMDI"
     gene            10956..11573
                     /locus_tag="PXB09_001534"
     CDS             10956..11573
                     /locus_tag="PXB09_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDL5233647.1"
                     /translation="MITLHYLNSSCSHRIVWLLEALGLDYELKIYHREESGFAPMEVK
                     ALHPLGKAPVLQDGDLVLAEGNAIIQHLIARYAEGKFEPTRGSEAYSMYHYWLSISAS
                     LFSANLVTMLANRSDLGAFGDYAKAQTPLYFNHIEQTLSDKKWIVGDELTGADFSLCF
                     PLQWGRNFVEMANYPNIARYLEQVENHPAYQKANQKALKLDMNRF"
     gene            11716..12657
                     /gene="argC"
                     /locus_tag="PXB09_001535"
     CDS             11716..12657
                     /gene="argC"
                     /locus_tag="PXB09_001535"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDL5233648.1"
                     /translation="MSKYKIFVDGAVGTTGLRIHERLSQADDIELLTLPEEQRKDLNA
                     RVAKVAEADLTFLCLPDEASKELVANAPENTRICDTSTAHRVNPNWVYGFPELSGQRE
                     KIQNAKRVAVPGCHATGYIALVRPLVEKGILPADYPLSCHSLTGYSGGGKAMIADYEN
                     ENSPNAFNAPRVYGLTLQHKHLPEMQAVTQMQNPPIFTPVVADYYSGMLVTVPLQIFA
                     LQAVKSGEEIANLLADYYQTSRLIHVHPFQSLPEDGMLAANAYAGKDSLEIFIYGNST
                     QLLLAARFDNLGKGASGAAVQCMNIMLGRDEVEGLEL"
     gene            12749..13603
                     /gene="argB"
                     /locus_tag="PXB09_001536"
     CDS             12749..13603
                     /gene="argB"
                     /locus_tag="PXB09_001536"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDL5233649.1"
                     /translation="MQQQEINQFANLLEKSTACLVKWQGKIIVVKYGGNAMINEELKK
                     SVMADLLLLHRLGVKVVLVHGGGLEISQGVKLLGKEPQFINGLRVTDSDTINVVLQML
                     AGKVNKSLVALLKGKGIGLCGIDGAMLQCKKLEAEVDYGFVGDIVKVDPTVIEIALNA
                     GLIPVVSTVGVDENGQAYNINADTAASEIAIALQAEKLVSMTDIAGLLRDRFDESTLI
                     PEVEVSEVQSLIEQGIIAGGMIPKIACCTDFIRAGGSEANIIDGRIDHAILVEMFGGK
                     NGTRFYKK"
     gene            13616..14800
                     /locus_tag="PXB09_001537"
     CDS             13616..14800
                     /locus_tag="PXB09_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDL5233650.1"
                     /translation="MTSSNTIKQLDKDYIAQTYGRFDLALSHGKGCEVWDFEGNKYLD
                     FTSGIGVNSLGWADEDWLQAVTTQAGKLAHTSNLFFTEPASQLAQKLVAASGLKRAFF
                     CNSGAEANEGAIKTARKYSFDKYGSGRSTVLTLVNSFHGRTISTLASTGQEVFHKHFF
                     PFTEGFEYLPVNGIEALKARLETENVCGILLEVVQGEGGVCPLEADYLHAVQSLCQEK
                     DILFMIDEVQTGIGRTGTLFAYQQFDLTPGLVTLAKGLGGGLPIGAFLLGEKVEMTLG
                     KSDHGSTFGGNPVSCAAANVVIDKINAEFLAQVQQKGQLLQQRLASLPKVKSVSGLGL
                     MLGVEFEEGILAADIVAKCINKGVLFLTAKSKLRLLPPLMISEQQIEQGIRVLEDVLK
                     DS"
BASE COUNT         4303 a         2792 c         3302 g         4426 t
ORIGIN      
        1 tttaaataaa agtaaccata ttgaagtggt agcattaaga gtgaatgtag ataatcctgc
       61 ttatattgag agctatgaat tgcttgaaaa attaggcgtt cagattgttg atattagaga
      121 ataaaatgaa gaaatattta atttcattag aaaaagatgt aaaaagacga gagctatttt
      181 ttagccagcc taatacggaa gattttgagg tgttcagtgc cattaataca atgagtagtg
      241 attgggaggc attaaataac cattttgatt tggctctgtt tgaacagcga tatgggcgta
      301 aaaccactaa gggcgaagta ggttgtactt taagccattt agccgtttac caaaaaattg
      361 ccgaagatag cactattgcg gaagatgatt actgcctagt ctgtgaagat gatgccttat
      421 ttgccgatga tttccaaaaa catcttgatg ctttattagc acaaaattta aaagtcgata
      481 ttattttagt tgggcagtcg aaaattccaa cttttaacga tagcgaatta gagcttaatt
      541 acccatcaac ctttggcttt ttgcaaaaaa atattccgaa tagccaatat aaatatgctt
      601 attcttacct gaattatttt gctggtacgg ttgcatattt aattaaaaaa tcgaccgctt
      661 gtcagttttt agcacaatgt gccggaaaaa atccatactg gcttgccgat gattttattt
      721 tatttgaaaa gaatttcaaa tttgatgtgt taattgtccg cccgttaatg gcgatagaaa
      781 atcctgttct aattagtaat ttggaagatt tacgtggttc attaaataat aatttattta
      841 aaaaagccgt aaaatatcca cttaaaaaat tactggcaat taaacgtaat tttactcagc
      901 gaaattcata ataggtctga aatgtcagca ctcattaact tattttatct ttacgatccg
      961 tggtttttcc attttttaag aatgtcgttt gtagtcgggc ttgttgcttg tggctatttg
     1021 gttttccaaa taatcaaggg caaatcgaat ggcattatta ttcctaaaga tagcctgatt
     1081 gcaattattg cattaatcgg ctttagcatt attccattat tgattaacag tacaaaagaa
     1141 attggtgtgc tggcaatgta tgtcaaaatg ctgattttgt ttgtgttcgg gattgcgatt
     1201 tataatgttt tttatcataa ccaacaaggt aaaactttat tcgttcgtga tttaaaaatc
     1261 ggcattgcta ttcaatggat ttgtggtgtg acagccttat taggtttgcc gtttatggtg
     1321 gattttttat tatccagcaa tgcaatgatg ccacgttttt ttggttcgga acaagaatac
     1381 cgtttatata acatcacttc ttccgccttt ttccaattaa gcatttttta tttaatgcta
     1441 ttacattttt tattggcata taataaaaaa acagatgtgg tgaatgagtg gtttttattt
     1501 ttattattat gtgttggttt aatttccggt agaacctttt tattaatgtc agtaataagt
     1561 attgcactct attttaaatg gaaatatata ttgccactga ttgccttcac tgcgttaatt
     1621 ctatttttgg cgattgtttt tccggaaaac cgttatgttg aacacgcctt agaaccggta
     1681 attaatttat tgtccggcac cggaaaagtc agctcttcaa ccgataattt agtgaaaaac
     1741 catctgtttt taccgacttt aaatcagttt atttccggtg atggtttata ttacaccgaa
     1801 actggtggct attatggtgg atcggattcc ggctatattc gccaagtatt atatggtgga
     1861 gtaagttata tgttggcgtg ttttgccttc acttactatt ttgtacgcaa agtggcggtg
     1921 aattggtttg aaggcagttg gatttttacc ttatccacca tcggcatttt agctatttta
     1981 aatattaaag cagatacctt tgctttcccg gggctgatga tgctgtttct aatgttcttg
     2041 tcgctgtttg gaacaagcgg tcgaaatgta acattttttt gcaaaaacaa agaggctgaa
     2101 tatgtttagt attattgtgc cttcttataa ccgtaatcaa gaaatcaatg cgttgcttga
     2161 gagtttaaag caacaaactg catataattt tgaagtgatc attgttgatg actgctcaaa
     2221 aataccggtc agtgaaactt taggaatttt aaatgaattt aacgatattt ctactaaaga
     2281 aaaagtaaga gaattactta ctagagatag tttatctcat atttatagct atccatttga
     2341 tgtgaaagtg gtgcgaaata acccaaatgt tggggcggca caaagccgaa atgtaggggc
     2401 aactaatgcc acacaagaat ggctactgtt tttagatgat gatgaccgct ttatgcctga
     2461 aaaatgcgaa cgtttagcgg cagagattgc gaacaatcca actgccaatt ttgtgtacca
     2521 cccggcaaaa tgtgaaatgg taaatgaggg ttttacttat gtcaccaagc cgtttaaaca
     2581 taaaagtgag ctaactaaag aaaacattct aaaagcgaat aaaattggcg gaatgccgat
     2641 gattggcttg aaaaaatcac tcttttgtaa aattggtgga ttatctgacc gcttgcgatc
     2701 acttgaagat tatgatttct tactgaaatt attggaagaa ccgagttttg agccattgta
     2761 tgtggacgaa gccttgacct attgtacttt ccataccaaa cgctccagtg tttcaaccga
     2821 taccactaat acagaaaagg ctattgagta tattcaacaa acgtatatca aaacacctga
     2881 ggcgaataat tttaagctca attcgcttta tattttaagt tatccacacg taatgaattt
     2941 atcccgcaag gcagccggtt attattttga gatgtttaaa cagactaaaa atatcaaaca
     3001 actgattatt gcgttggtta tttttatttc gccgaagttg gcgattaatt tgaaaaggtt
     3061 tatgtaatga aattttccgt tttaatgtcg ttatacatta aagagcaacc gcaatattta
     3121 agagaatgtt ttgaaagctt gaaagtacaa actgtgcagg ctgatgaaat cgttgtttgt
     3181 tttgatggtg cagttacgcc tgaattagag gcgattgtag aagaatatag tgcaattttg
     3241 ccgattaatg cggtgaaatt cccacaaaat cgaggtttag gtaaaacgct aaatgatggg
     3301 ctaacctatt gtaagaatga atgggttttc agaatggata cagacgatat ttgtatgccg
     3361 gaacgtttcg agaaacaagt ggcatttatt gaacagaatc ctgaaaccgt gatttttggc
     3421 ggccaaattg ctgaatttgg gcaagatatt cacgatcttg tcgcttaccg caatgtacca
     3481 accacggtgg aggaaatcgt cagattcact cgcttgcgtt gcccgtttaa ccatatgacg
     3541 gttgcttatc agaaatccaa agtgttggaa gtcggtggct atcaagatct gcaagaagat
     3601 tactatttat ggatcaaact cattgctcaa tttaaacaag tggcaaactt gccggattta
     3661 ttagtgtatg cccgagtcgg taacggaatg gttggcagac gccgtggaat ggcccaagca
     3721 gaggcagaat ggcgtttata taaattaaaa aaccgctgcc agattcacga tccgatttca
     3781 ggttttggga ttttcataat gcgtgcaatt cctcgtttat taccggtttc agcactgaaa
     3841 aaagtgtacg gtttgctcag aaaataaagc taaaaaaacc acagattgct ctgtggtttt
     3901 ttgttattga ttcttcaaaa tctcattcat taattgaata tcaatatggc agtagccgtt
     3961 cgggtttttt actaaatatt cttggtggta ctcttcggca gggaaatatt gctctaacat
     4021 ttggttttcc actgccagcg gctgatcaaa ttgggtttgt aattgtgcaa gtgcggcggt
     4081 taccaccggt tcgtcttgtg ggtcggtata ataaataccg gtgcggtatt gaataccgat
     4141 gtcgccacct tgtttgttaa tgctcaccgg gtctattact ttaaagaagt aatctagtaa
     4201 ttttgccaag ctaatttgat tggcatcata agtcactttt accacttcag cgtgtccgct
     4261 accggcacac acctcttgat agcttgggtt atcggtatta ccgttggcat agcctgattg
     4321 tgccttaatg acacctttaa tccgttgcat aaaagattcc acgccccaga aacagccacc
     4381 ggctaagtaa atttcacgaa tattttgcat attacctctc tataattgta aatttttcga
     4441 taaatttgac tgcttgtgat gaataataaa ataccataat ttagtttttg tcaaattttg
     4501 tcttgaatga tgataatttc acaagatttt ttgcctaaaa ataggtatag tatcgtcacc
     4561 ttttttaatc aatttataat tagaggttct atgggtactc ttaacagctt tttaggcatt
     4621 attgttttac tattcattgc atttttattt tcgagcaata aacgtgcaat aaacgtgcgt
     4681 accgtattag gcgcattagc attgcaggta gctattggtg cattggtgct ttatgtgccg
     4741 gcagggcgtg atgccttgaa tgcgatggca acaggtgtgt caaaagtgat ttcttacggt
     4801 aatgaaggga tttcattttt attcggtggc ttagtcagcg acaaaatgtt tgaagtattt
     4861 ggcggcggcg gctttgtgtt cgctttccgt gtacttccgg tgattatttt cttctctgca
     4921 ctcatttctt tgctttacta cattggagtg atgcaatggg taatccgtat tttaggtggt
     4981 ttattacaaa aagcattagg tacatctaaa gcggaatcta tgtctgcggc agctaatatt
     5041 ttcgttggcc aaactgaagc tccattggta gtaaaacctt atatcagcaa aatgacagaa
     5101 tctgaactct ttgcgattat ggcagggggc ttagcttcta ttgcaggttc tgttatggct
     5161 ggttacgcag gaatgggcgt accattaacg tacttaatcg cagcctcctt tatggcggct
     5221 ccggcagggt tattattcgc caaaattatg gtgccacaaa ccgaaaaatt ccgtgatgaa
     5281 ctagaagcgg tagatttaga aaaaccggca aatattcttg atgcagcagc ttcaggtgct
     5341 tcttcaggta tgcaactggc attaaacgta ggggcaatgt taattgcatt cgtggcgtta
     5401 attgcattag tgaatggtat tttaggaggt attggcggct ggttcggtta tgatacctta
     5461 aacttaggtc aaattttcgg ctgggtattt aaaccgcttg cgtgggtaat cggtgtgcct
     5521 tgggaagaag cagaaattgc ggggcagatg atcggcttaa aattagcggt aaatgaattc
     5581 gtgggttatt tagagtttgc taaatactta gctcctgagt caaccgtaca tttaacggat
     5641 aaaactgttg cgattattac ctttgcactt tgtggctttg cgaacttcag ctcgattgcg
     5701 attttaatcg gtggtatcgg ggcaatggct ccaagccgtc gtggtgatat tgcccgactt
     5761 gggattaaag ccgtcattgc tggctcactt gccaacttaa tgagtgcaac cattgccggc
     5821 ttgtttatcg gcttgggtgg agcagttctc taatccagtt tgtataaaac cactagaaat
     5881 agtggtttta tcttttttta tctgacgtaa acggttgctt ttggtttgtc tatttacaag
     5941 cggtcagatt tttataaaat tttaccaacc accacgcatt taataaaagg agacactatg
     6001 aatttaaaaa aatccgctga gattgctctt tcgttgatgg atctcaccac attaaatgac
     6061 aatgatactg atgagaaagt catcgcatta tgccaacaag cgaacaccaa gtttggcaca
     6121 ccggcagcaa tttgcattta tccacgtttt atcccgattg cccgcaaagc attgaaacag
     6181 caaggtatcg agcaagtaaa aattgcgaca gtcacgaatt tccctcacgg taatgatgat
     6241 attgaaattg cggtagctga gaccaaagcc gcagttgctt atggggcaga tgaggtagat
     6301 gtggtattcc cttataaagc attaattgca ggtaatgagc aaataggttt cgacttggta
     6361 aaacaatgca aagcagtttg tgctgccaat aatgtgttgc ttaaagtgat tattgaaacc
     6421 ggcgagttaa aatcagcaga gcttattcgc aaagcaagcg aaatttcgat tcaagcaggg
     6481 gctgatttta ttaaaacctc aaccggcaag gtggcagtga atgctaccct tgaatctgcc
     6541 cgcattatgc ttgaaaccat tcgtgattta ggtgtggcag accgtgttgg ctttaaagct
     6601 gcaggtgggg taaaaacctc ggaagaagcc gcccaatatc ttgcacttgc ggaatctatt
     6661 ttaggcaatg actgggtgag tgcatcacat tttcgcttcg gtgcatcaag tttattagct
     6721 aatttattag caacattgaa tgatgaacag cagcaagctg ttcaaggtta ttaattaata
     6781 aagaggaaca taaaatggct actccacaca ttaacgcacc tgaaggtgct ttcgctgacg
     6841 ttgtaattat gccgggcgat ccgcttcgtg ctaaatatat cgctgaaacc tttttagaag
     6901 atgcaaaaga agtgaccaat gttcgcaata tgttaggcta caccggcact tataaaggtc
     6961 gccgcatttc agtaatgggg cacggtatgg ggattccatc ttgctcgatt tacgctaaag
     7021 aattaattac tgaatatggc gtgaagaaaa ttatccgtgt cggctcgtgc ggtgcggtac
     7081 gtaatgatgt caaagtgcgt gatattgtca tcggtgttgg ggcttgtacc gattctaaag
     7141 taaaccgtat tcgcttccgt gataacgatt ttgcggcgat tgctgatttt gatatgacat
     7201 tagctgctca ccaagcagct aaagcgaaag gcattgaagc tcgtttcggt aatttattct
     7261 cagccgattt attctactca cctgatgtcg aaatgtttga tgtaatggaa aaatacggca
     7321 ttttaggcgt agaaatggaa gcagcaggca tttatgcggt agcggcagag tatggagcaa
     7381 aagcattagc aatttgcacc gtttcagacc atatccgcac cggtgagcaa actacctctg
     7441 aagaacgtca attaaccttt aatggtatga ttgaaattgc gttagagtca gtattaattg
     7501 gcgataagca gtaatttcta acctgacaag cggtgaaatt ttgcaaaaaa tttgcagaat
     7561 ttgaccgctt gttatttttg attcttcctt tatcttcctt tcgggctttc gccaaactgc
     7621 cttttatatt ctcgactaaa ctggcttggg ctttcatagc cgacttgata ggcggtttca
     7681 ctcacgctta ctcctgcttg tagtttttcc cttgccgcat ttagtcttaa cgatttctga
     7741 tattgcagtg gtgtcattga agttacgctt ttaaaatgag cgtaaaaccc cgccacgctc
     7801 attcctacct cttcagccag tgctgacata tttagtgtat cggcaaattt tctttctaag
     7861 atttttgttg cattggcaat tttagcaata ttgccatctt gagagagtag agagcgtata
     7921 tagccacctt gctcagattg taataaatag aaatagagtt cgtttaatat caatggtgca
     7981 agaaaatgaa tatgatttgg agaattaagc aaatttagta agcgtaacaa acagtcttta
     8041 atttcattct ccagctccca tttagtgcgt tgattaatgt tttcacttat tttctgtggg
     8101 ggaagctgcg tgataatttt ggcaataaga tcaaaatcca agcgtagtga aatcgcaaga
     8161 taaggctgat tttctgcaac tgataaggtt tgggtaacaa tcggcaaatt cacagggcaa
     8221 aacatcattt cctgattacc gaagacttgg caatgtccat tggtacagat ttgccgctcg
     8281 cctaataata ctacacataa acttgggtct tggatataac cgttaaatct aatagaacga
     8341 tcggcagcgt gaacggttag ccctgaaatg ggagtagccc aaagttcatt tttcggagcg
     8401 agggcaaaaa tagattcaat aatagctcga tgagtttgca taataatctc acttttagaa
     8461 aattaggcat attttataga aaatcaggca agacgacaaa tagcaaaaag cggataatat
     8521 ccccaatcaa ataaagcatt taataggagc aaaatatgaa aattttttat cacacatcag
     8581 caactgcaac cggtggtcgt gacggcagaa cccaagtgga tgacggttct atcggttttg
     8641 atttagtcgg tttccaaaat gaaagtggca aagtaggcac taatccggaa caattattcg
     8701 caatgggcta tgctgcctgc tttgacagtg caatgaatca cgttgcccca accttaggca
     8761 ttaagccaac caaatccagt accactgttg cagttgggat tggtcaaaaa gctgatggtg
     8821 ctttcggctt agatttagat attaccatta ctgtggaagg cattagtgcg gaagaagcga
     8881 aaactttaat tagcaaggca cacgaagttt gcccatattc aaatgcaacc cgtggtaatg
     8941 tagatgtgcg tttacacgtt aaagtcgtga gtgaatttga cttataaaaa ataaataggg
     9001 gaaatgaaaa tgttagattt tgaaaccacg gtaaaaacac gacaatcaat ccgcaagttt
     9061 ttaccgcttc cgatgacgga aactgaaatc aaacaaattc ttgccgatgc acaaaatgcc
     9121 ccttcggctt gtaatacaca gccgtggtta gtacacgttg cctctggtga aacgctagca
     9181 cgcttaaaag ctcgttttaa aaagactttt gaagcgggca ttaatgatgc ggattttgag
     9241 ttcaatcaaa cgaaatttac cggtgactac gaaccacgtt ggcgtaacca atacagccac
     9301 gtttttacca ccagctatgg cattccccgt gaagataaag ccggtcgcca agtggtgtat
     9361 gatgacaata ttgtcggtta tggtgcgcca catatggcat tcctatttat gccaagcatt
     9421 gacggacacg atgtcaatat tgccagcgat gttggtatgt attcgcaaac tttcttgctc
     9481 tcactcaccg ctcgtggttt tggcggcatt ccgcagcttg cccttgcgat gtttgctaaa
     9541 gatgtgcgtg aagagttagg cattcctgaa cattacaagc tcctccacgc catttctttc
     9601 ggacacccag attgggacgc tatgcagaac aaacaccatt tagggcgtgt gccggtggaa
     9661 gagagtgcga ccttacattg gtaataaaca agcggttgat ttttcgcaaa aatttgcgaa
     9721 atcaaccgta ttttttagga gaatacgatg ataaatttat ttacccctta tactctgaat
     9781 aacgatgtag aaattaaaaa ccgccttgta gttgccccaa tgacccattc cgcctccaac
     9841 gatgacggca caattagcga gcaagaacgc catttcttgc ataatcgtgc agcagatatg
     9901 ggcttattta tcaccgcagc aaccggggta atgcgtaacg gcaaagcgtt ttacggtcag
     9961 ccggaagctc ttgatgaacg ctatttggca agcctgacag aaactgccaa tatcttgaaa
    10021 aatcaaggca ccaaagcgat tttgcaaatt ttccacggtg gggcacaagc tattcctgcc
    10081 ttgcttgacg gggcgaatgc agttgcgccg tccgagcacg ccaacggtgc taaagcccta
    10141 acggcggacg aagtgaagca aatgatccaa gctttcgcta atgccaccga tttagctatt
    10201 caagccggtt ttgatggtgt ggaaattcac ggggcgaacg gctatttaat tcaacaattt
    10261 ttctctactg aatttaatca acgcactgat gaatggggcg gtagccttga aaaacgcttg
    10321 cgtttcccgt tagcggtggt tgaggcagcg gtcagcgtgc gtgaaaaaca ccaacgccct
    10381 gattttatta tcggctaccg tttctcaccg gaagagccgg gcgaacacgg cttaaccatg
    10441 accgatacct acgccctgat tgatgctttg tgcgaaaagc cgttgcaata cttgcacatt
    10501 tcactctggg atttcggcaa aaaagcccgc cgtggtgcag ataccaactt cacccgtatg
    10561 caactggtac accaacacat caacgggcgt ttaccgctga tcggcgtggg taacttatta
    10621 accggtgaac agatccgtaa agcttatgca acaggctggg cagaatttat cgccttaggt
    10681 aaagcggtaa tgctcaaccc gaacgtggcg accttgttga aagataatcg agacagtgag
    10741 attgtcagcg aactcgaccc gcaacaagcc gaccactacg gcattcccga tagactatgg
    10801 ggctactgcg tgcaaggtgg tgcttggtta ccgccgctta aagggcaaaa cgggcaacca
    10861 atggatattt aatcattaca gacaagcggt catttttttg taaaaatttg caattaagtg
    10921 accgcatttt ttcaattatc tgaaggagaa aaattatgat tacgttacat tacctgaaca
    10981 gttcctgctc tcaccgcatc gtttggttgt tggaagcctt aggcttggat tacgagctaa
    11041 aaatctacca tcgtgaagag agcggttttg cacctatgga ggtaaaagcc ttgcacccac
    11101 ttggcaaagc ccctgtgttg caagatggcg atttggtgct tgccgaaggc aatgcgatta
    11161 tccagcatct gattgcccgt tacgccgaag ggaaatttga gccgactcgt ggtagcgaag
    11221 cctattcaat gtatcactac tggttgtcga tttctgcttc attattctcg gcaaaccttg
    11281 tgacaatgtt ggctaatcgc tctgatctcg gagcttttgg cgactacgca aaagcgcaga
    11341 ctccgctgta ttttaaccat attgagcaaa cactttcaga taaaaaatgg attgtgggtg
    11401 atgaactaac cggtgcggat ttttctctct gtttcccact acaatggggg cgtaattttg
    11461 ttgaaatggc aaattacccg aatattgcac gctatttaga acaggtggaa aatcaccctg
    11521 cttaccaaaa agcgaatcaa aaagccctga agcttgatat gaatagattt taatactctt
    11581 tttaatccct aacattttgt tagggatttt tgaatataaa atcaattaat gtgaataatt
    11641 attcaaaaat aaacttgagt ttagccttaa atagccttag actaccgagc agaaaaagtc
    11701 aaagaaggat tttcaatgag caaatacaag atttttgttg atggggcagt aggaacaacc
    11761 gggctacgca ttcacgaacg tttaagccaa gcggacgata ttgaattatt aaccttgccc
    11821 gaagagcagc ggaaagattt gaacgcccgt gtggcaaaag tcgcagaggc ggatttaact
    11881 ttcctctgtt tgccggatga agcctcaaaa gaattagtag caaatgcacc ggaaaatacc
    11941 cgaatttgcg atacttcaac cgctcatcgg gtcaatccta attgggttta tggttttccg
    12001 gaattgagcg gacaacgtga aaaaatccaa aatgccaagc gtgttgcggt gccgggttgc
    12061 catgccacgg gctatattgc gttggttcgt ccactggtgg aaaaagggat tctgcccgcc
    12121 gattaccctt taagttgtca ttccttaacc ggctattcag gcggtggcaa agcgatgatt
    12181 gctgactatg aaaatgaaaa cagcccaaat gctttcaatg cccctcgtgt ttacggttta
    12241 actctccaac acaaacattt gcctgaaatg caggcagtta cccaaatgca aaacccaccg
    12301 attttcaccc ctgtggttgc tgattattac agcggaatgt tagtcactgt gccattgcag
    12361 atcttcgcct tacaagcggt caaatccggc gaagaaattg caaatttgct cgccgattac
    12421 taccaaacca gccgactaat tcacgttcac cctttccaat ctctacccga agacggaatg
    12481 cttgccgcga atgcttatgc aggtaaagac agcttagaga tttttattta cggcaacagc
    12541 acccaacttt tacttgctgc ccgttttgac aatttaggca aaggggcatc aggtgccgca
    12601 gtgcagtgta tgaatattat gttgggaaga gatgaggttg aggggttaga gctttaaata
    12661 taaatgtagg gacaggtcct gtgcctgtcc gataatcatc gcccatattc ggacgggcac
    12721 aggacccgtc cctacaagag aaagaaatat gcaacaacaa gaaatcaatc aatttgcaaa
    12781 tttattagaa aaatccaccg cttgtttggt gaaatggcag ggtaaaatca ttgtggtgaa
    12841 atatggcggt aacgcaatga ttaatgagga actgaaaaaa tcagtgatgg cagatctgct
    12901 gttacttcat cgtttaggcg taaaagtggt actggtacac ggtggcgggc tggagatttc
    12961 acaaggcgtg aaattattgg gtaaagaacc gcaatttatc aacgggttgc gtgttaccga
    13021 tagcgatacg attaacgtgg ttttgcaaat gttggcaggc aaagttaata aaagccttgt
    13081 cgccttatta aaagggaaag gcattgggct gtgtggtatt gatggggcga tgttgcaatg
    13141 caaaaaatta gaggcagagg tggattacgg ctttgtgggc gatattgtga aagtcgatcc
    13201 aactgtgatt gaaattgctc ttaatgcggg cttgattccg gttgtttcca cggtgggcgt
    13261 tgatgaaaac gggcaggctt ataacattaa tgcagacacc gctgccagcg agattgcgat
    13321 tgcgttacaa gcggaaaaat tggtctcgat gaccgatatt gcaggtttat tgcgagatcg
    13381 ctttgatgaa agcaccttaa ttccggaagt ggaagtaagc gaagtgcagt ccctgattga
    13441 gcaaggcatt attgccggtg ggatgatccc caaaattgcg tgctgtaccg atttcatcag
    13501 agctggtggc tctgaggcaa atattattga cgggcgaatc gaccacgcca ttttggtaga
    13561 aatgttcggt ggcaaaaacg gcacacggtt ttataaaaaa taacaggaaa gtgaaatgac
    13621 aagcagtaat acgattaagc aattagataa ggattatatc gcccaaacct atggcagatt
    13681 tgaccttgca ctgtcgcacg gaaaaggctg tgaagtgtgg gattttgagg gcaataagta
    13741 tcttgatttt accagtggca ttggggtaaa tagtttaggc tgggcggatg aggattggct
    13801 acaagctgtt accacacaag ccggcaaatt agctcacacc tcaaacctgt tttttaccga
    13861 accggcaagc caattagccc aaaaattagt ggctgcaagc ggtctaaaac gggcattttt
    13921 ttgcaattca ggggcagagg caaatgaagg agcaattaaa accgcccgca aatatagttt
    13981 cgacaaatac ggttccggtc gttcaacggt tttaaccctc gtgaactctt ttcacggacg
    14041 aaccatttca accctcgcat ccactgggca agaggtattc cacaagcatt ttttcccctt
    14101 tacagagggc tttgaatatt tacctgtaaa tggcattgag gcactgaaag ctcgcttgga
    14161 aactgagaac gtttgcggga ttttgctgga ggtggtgcag ggcgagggcg gtgtttgccc
    14221 attagaggcg gattatctgc acgccgtgca aagcctgtgc caagaaaaag atattttatt
    14281 tatgattgat gaggtgcaaa ccggcattgg gcgaacgggc acactttttg cttatcaaca
    14341 atttgattta actcctggtt tagtcacgct cgctaaaggc ttgggcggcg gcttgccgat
    14401 tggtgctttc ctgttaggcg aaaaagtgga aatgacatta ggcaaaagcg accacggctc
    14461 aacctttggt ggcaatcctg tttcctgtgc tgctgcaaat gtagtaatcg ataaaataaa
    14521 cgccgaattt ctcgcccaag tgcaacaaaa agggcagttg ttacagcaac gcttagcgag
    14581 cttaccaaaa gttaaatccg tttcaggctt aggtttaatg ctcggcgtag aatttgagga
    14641 aggcatttta gccgctgata ttgttgcaaa atgtatcaac aaaggtgtgc tgtttttaac
    14701 cgctaaaagc aagttaaggc tactcccacc gctgatgatc tctgaacaac agatagaaca
    14761 aggaatcaga gtgttagagg atgtcttgaa agattcttga gttattataa acagtaggaa
    14821 tat
//
LOCUS       DANLTI010000066        14815 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.066, whole genome shotgun sequence.
ACCESSION   DANLTI010000066 DANLTI010000000
VERSION     DANLTI010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14815
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.066"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            37..456
                     /locus_tag="PXB09_001538"
     CDS             37..456
                     /locus_tag="PXB09_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS sensor domain-containing protein"
                     /protein_id="HDL5233651.1"
                     /translation="MVPSNEAVLKAVHDTLVISTTDLQGVITYANDLFCKLTGFTREE
                     LIGQPHNIVRHPAVPKEVYKDMWDTIQAGKIWTGIVPNCGKGGVVYVVDTTVQPMFDE
                     TGKITGYISVRRVINDLMTNFEAVESAKEIFDDFYGE"
     gene            527..2083
                     /locus_tag="PXB09_001539"
     CDS             527..2083
                     /locus_tag="PXB09_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDL5233652.1"
                     /translation="MSLIPHIHIAYGSESGNAEKLAQQLAIQPFLLPYSPTLSTLNET
                     DLSQLSAESLLLIVTSSFGDGEPPENADEFAEKLENLTACNLQYAIFGLGDITYDKFC
                     GYSKQLDSLLQQKQAKAVIARVDADLNYQEIFKQWLPLVEQALHSTNKETIQHSLSVQ
                     AYGEEMAYQAEVLEIKHLANSSPAVYHIRLSLKESGIFYQAGDLIYVKVQQPDRLLNE
                     YAEWFNDQNAVALLRHKELRLLSKNVLRDIQKICGSNELKDLTKISNKKALEQYVYGR
                     DLLDVLRDFDPNKSVTLADLEPILSNLAARAYSISSCGKTHPDYVDLCIRHVSYHLNG
                     RDYQGTASGYLSELQAGDFVSIFANANPNFRLPETLTAPVVMIGSGTGIAPHIAFLQA
                     LEQQYQGVESYLFFGERYRDKDFLYQTELENYLAKGTLTQLFTAFSRDQAEKFYVQDA
                     LSQQAELVWHLIQQGAYFYICGSKAMSKAIDAELIKIADQIGGDPYIDDFNNIIAKLV
                     AEGRLMRDVY"
     gene            complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXB09_001540"
     CDS             complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXB09_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDL5233653.1"
                     /translation="MTDKIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKL
                     HVHDENNEAKLGDVVEIKECRPISKTKSWTLVRVVEKAVVA"
     gene            complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXB09_001541"
     CDS             complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXB09_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDL5233654.1"
                     /translation="MKAQELRNKSVEELNGELVNLLGEQFKLRMQAATGQLQQTHQLK
                     QVRRSIAQVKTVLTEKAGE"
     gene            complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXB09_001542"
     CDS             complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXB09_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDL5233655.1"
                     /translation="MLQPKRTKFRKVHKGRNRGIAGGTEVSFGSFGLKAIGRGRLTAR
                     QIEAARRAMSRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVSEEVARNAFALAAAKLPFKTTFVTKTVM"
     gene            complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXB09_001543"
     CDS             complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXB09_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDL5233656.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLN
                     KELANASVSRITIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQIN
                     IAEVKKPELDAKLVADSIASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGA
                     EIARSEWYREGRVPLHTLRADIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESE
                     KEPAAQPKKAPRGKGRK"
     gene            complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXB09_001544"
     CDS             complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXB09_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDL5233657.1"
                     /translation="METIAKHRYARTSAQKARLVADLIRGKKVSVALEILTFTNKKAA
                     TLVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXB09_001545"
     CDS             complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXB09_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDL5233658.1"
                     /translation="MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSM
                     IGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK"
     gene            complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXB09_001546"
     CDS             complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXB09_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDL5233659.1"
                     /translation="MAIVKCKPTSAGRRHVVKVVNAELHKGKPFAALLDTKSKTGGRN
                     NLGRITTRHIGGGHKQHYRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLTAGDQIQAGASAPIKVGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGA
                     YVQIIAREGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRWRGIRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRHNKRTDKFIVRRRGK"
     gene            complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXB09_001547"
     CDS             complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXB09_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDL5233660.1"
                     /translation="MIQQERLLNVLKAPHISEKATNNAEKGNTIVFKVALDANKVEIA
                     NAVEELFEVKVDSVRTVVVKGKTKRRGAKVGRRSDWKKAYVTLQEGQSLDFVEGAAE"
     gene            complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXB09_001548"
     CDS             complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXB09_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDL5233661.1"
                     /translation="MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRA
                     QKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGSVTFAAKPQDHSQKVNKRMYRG
                     AIKSILSELVRQDRLVVVEKFEIDAPKTKVLAQKLKDMALNDALIITANVDENLFLAA
                     RNLYKVDVRDVQGIDPVSLIAFDKVVVTVDAVKQIEEMLA"
     gene            complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXB09_001549"
     CDS             complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXB09_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDL5233662.1"
                     /translation="MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDG
                     YSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFT
                     DVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK
                     MAGHLGAERVTVQSLEVVRVDVERKLLLVKGAVPGATNGDVIVKPAVKA"
     gene            complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXB09_001550"
     CDS             complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXB09_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDL5233663.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            7559..8059
                     /locus_tag="PXB09_001551"
     CDS             7559..8059
                     /locus_tag="PXB09_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5233664.1"
                     /translation="MQTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQ
                     NGATYLRIAKKDIEYIRQYPKTCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGI
                     IEELRTEKYKISQKRATQIRNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLIL
                     HRRLTV"
     gene            8347..9741
                     /gene="fumC"
                     /locus_tag="PXB09_001552"
     CDS             8347..9741
                     /gene="fumC"
                     /locus_tag="PXB09_001552"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDL5233665.1"
                     /translation="MEFRIEKDTMGEVQVPADKYWAAQTERSRNNFKIGPEASMPAEI
                     IEAFGYLKKAAAYANHDLGVLAVEKRDLIAKACDEILANKLDDQFPLVIWQTGSGTQS
                     NMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEHT
                     LPCVKRLQKTLAEKAEAFKDVVKIGRTHLMDATPLTLGQEFSAYAAQLAFGIKALENT
                     LPHLRELALGGTAVGTGLNTPQGYDVKVAEYIAKFTGLPFVTAQNKFEALATHDAIVE
                     THGALKQLAVSLYKIANDVRLLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMT
                     MVCAQVLGNDVTISFAGTQGHFQLNVYKPVMAYNFLQSAQLLGDACVSFDEHCAVGIE
                     PNYPRIKQQLDQSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQF
                     DEWVRPEDMVGSLK"
     gene            9868..9978
                     /locus_tag="PXB09_001553"
     CDS             9868..9978
                     /locus_tag="PXB09_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDL5233666.1"
                     /translation="MKKLILIALVTTLGLSACGVKGPLYFPEQAPKHEQK"
     gene            10083..11333
                     /gene="lysA"
                     /locus_tag="PXB09_001554"
     CDS             10083..11333
                     /gene="lysA"
                     /locus_tag="PXB09_001554"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDL5233667.1"
                     /translation="MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAF
                     NNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFS
                     GVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHP
                     YISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLI
                     ILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPG
                     RAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITEVDKTLNRDK
                     AVYDVVGPICETSDFLGKQRELAISEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVD
                     GNQAHLIKARATFADLWRLEKLLP"
     gene            11347..11976
                     /locus_tag="PXB09_001555"
     CDS             11347..11976
                     /locus_tag="PXB09_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDL5233668.1"
                     /translation="MKLYGLTGACSFVPHVALEWVKLRANQDYAFQAVSREFIKSAEY
                     LALNPRGNVPLLVDGDLALTQNQAIVHYLDELYPEAKLFGSKTARDKAKAARWLAFFN
                     SDVHKSFVPLFRLPSYAEGNETLTKTIRQQSAEQILEQLAFANAHLENHIFFGEEISV
                     ADAYLYIMLNWCRLLGLDFSHLSQLSAFMQRVEADQGVDNVREQEGLKG"
     gene            12047..13492
                     /gene="tldD"
                     /locus_tag="PXB09_001556"
     CDS             12047..13492
                     /gene="tldD"
                     /locus_tag="PXB09_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDL5233669.1"
                     /translation="MLNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQD
                     ESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS
                     GQLSVKNFKKTTACSRYPAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSA
                     VYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSET
                     GFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRK
                     ESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQ
                     DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFS
                     GGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSMVGKKMELDPG
                     IGTCGKEGQSVPVGVGQPTVKLDKITVGGRG"
     gene            13556..14437
                     /gene="prmA"
                     /locus_tag="PXB09_001557"
     CDS             13556..14437
                     /gene="prmA"
                     /locus_tag="PXB09_001557"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDL5233670.1"
                     /translation="MAWVQIRLNSTDKQAEEISDFLTEIGAVSVTFMDSQDTPIFEPL
                     PGETRLWGNTDVVGLFDAETDMNLIVEALKTSKLVDENFAHKIEQIEDKDWEREWMDN
                     FHPMQFGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLEGK
                     TVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQ
                     PRELQADVVVANILAGPLKELAPNIITLVKPNGNLGLSGILATQAESVCEAYSEAFTL
                     DPVVEKEEWCRITGRKI"
     gene            complement(14612..14687)
                     /locus_tag="PXB09_001558"
     tRNA            complement(14612..14687)
                     /locus_tag="PXB09_001558"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14652..14654),aa:Trp,seq:cca)
BASE COUNT         4375 a         3212 c         3000 g         4228 t
ORIGIN      
        1 catttatatt aatggagatt caacacggct gaacaaattg ttccttcaaa tgaagctgtt
       61 ttaaaagcag tccacgatac tttagttatt tcaacaactg atttacaagg tgttattact
      121 tacgctaacg accttttctg caaattaacc ggttttaccc gtgaagaatt aattggacaa
      181 ccgcataata tcgtacgcca cccagctgta ccaaaagaag tttataaaga tatgtgggat
      241 acaatccaag ccggtaaaat ctggacaggt atcgtaccaa actgcggtaa aggcggtgta
      301 gtttatgtgg ttgataccac cgttcaacca atgtttgatg aaacaggcaa aattacaggc
      361 tatatcagcg ttcgccgtgt aattaatgat ttaatgacca actttgaagc agtagaatca
      421 gcaaaagaaa tctttgatga cttctacggt gaataattaa aaaacaatga ttgcgtgtaa
      481 aagatgatct cttttacacg caatttttta ttttcgagga gtttgtatgt ctctcattcc
      541 ccatatccac attgcttatg gttcggagtc tggtaacgca gaaaagcttg cccaacaatt
      601 agctatccaa ccctttttac ttccctactc acccacactt tctacattaa acgaaaccga
      661 tttaagccaa ttatctgccg agagtttatt gcttattgta accagctcct ttggtgatgg
      721 cgaaccacct gaaaacgccg atgaatttgc agaaaaattg gaaaatttga ccgcttgtaa
      781 tctgcaatat gcgatattcg ggctaggtga tattacttat gataaattct gtggctatag
      841 caaacaacta gattcattat tacaacaaaa acaagctaaa gctgtgattg caagggttga
      901 tgccgattta aactatcaag aaatttttaa acaatggcta cccctagtgg agcaggcatt
      961 acattcaaca aacaaagaaa cgatccaaca ttccctttct gttcaagctt acggcgagga
     1021 aatggcatac caagcagaag tgttggaaat taagcatttg gcaaactcaa gccctgcggt
     1081 gtatcacatt cgtttatcat taaaagagag cggtattttc tatcaagcag gggatttaat
     1141 ttatgtcaaa gtgcagcaac cagacagact attaaatgaa tatgcagaat ggtttaacga
     1201 tcaaaatgca gttgcattac tacgccataa agaactccga ctactaagta aaaatgtact
     1261 gcgtgatatt caaaaaattt gcggcagtaa tgaactcaaa gatttaacta aaatttccaa
     1321 taaaaaagca ttggaacaat atgtctatgg gcgggattta ttagacgtat tacgcgattt
     1381 tgacccaaac aaaagcgtga cattagccga tttagagcca attttatcta acttagccgc
     1441 acgagcctat tcaattagct cttgcggtaa aactcaccct gattatgttg atttatgtat
     1501 ccgccacgtt tcgtatcatt taaacggtag agattatcaa gggactgcaa gtgggtattt
     1561 atccgaatta caagcgggcg attttgtctc gatttttgca aatgccaatc cgaatttccg
     1621 tttacccgaa acattaaccg ctccggtggt gatgattggc tcaggtactg gcattgctcc
     1681 gcatatcgca tttttacaag cgttagagca gcaatatcag ggggttgaaa gctatttatt
     1741 cttcggcgag cgttatcgtg ataaagattt tctgtatcaa acggaactgg aaaattactt
     1801 agcaaaaggc accttaactc agctgtttac tgctttttca cgtgatcagg cagagaagtt
     1861 ttatgtgcaa gatgccctat cgcaacaagc agagttagtt tggcatttaa ttcagcaagg
     1921 ggcttatttc tatatttgtg gtagcaaagc aatgagtaaa gcaatagatg cggaactcat
     1981 caaaattgca gatcaaattg gaggcgatcc ttatattgat gatttcaata atattattgc
     2041 aaaattggtc gcagaaggcc gattaatgcg agatgtatat tagcaaatga aaaaaactaa
     2101 aaacccagca aaagctgggt ttttatttaa tcatagttca ttaagcaaca actgctttct
     2161 caactacacg aactaaagtc caagatttag tttttgaaat aggacgacat tccttaattt
     2221 caacaacatc acctaattta gcttcattgt tttcatcgtg tacatgaagt ttagtagtac
     2281 gacggataaa cttaccgtat aacggatgtt taactgtacg ttcgatagca acaacaaatg
     2341 atttatccat tttgtcgcta accactttac cttgtactgt acgaatttta tcagtcatta
     2401 ttcacccgcc ttttcggtta atacagtttt aacttgtgca atactacgac gcacttgttt
     2461 taactggtgg gtttgttgaa gctgaccggt ggctgcttgc atacgcaatt tgaattgttc
     2521 acctaaaagg ttcactaact caccattcag ctcttcaaca cttttattac gtagttcttg
     2581 agctttcatt acatcaccgt cttagttaca aatgtggttt tgaacggaag tttagctgcc
     2641 gctaatgcaa acgcattgcg tgcaacttct tcagaaacac catccatttc atagagaact
     2701 ttacccggtt ggattaaggc tacccagtac tcaacgttac ctttaccttt acccatacgg
     2761 acttctaatg gtttttcagt aattggtttg tctgggaaca cacggatcca gattttacct
     2821 tgacgtttaa ccgcacggct catcgcacga cgagcagctt caatttgacg agctgttaaa
     2881 cgaccacggc caatagcttt taaaccaaat gaaccgaagc tcacttctgt gccacccgcg
     2941 ataccacggt tacggccttt gtgtacttta cggaattttg tgcgttttgg ttgtaacatt
     3001 cagtgattct ccttatttac gacctttgcc acgtggcgcc tttttaggct gtgccgctgg
     3061 ttctttttca gattcaatca ctgcagccat tccaccaaga atttcacctt tgaagatcca
     3121 cacttttacg ccgattacgc cgtaagtagt gtgagcttca gcagtactat aatcgatgtc
     3181 tgcacgaagc gtatgtagag gtacacgacc ttcacgatac cattctgagc gagcaatttc
     3241 tgcaccacct aaacgaccgc taacttcaac tttgatacct ttagcaccta atttcatcgc
     3301 gttttgaact gcttttttca ttgcacgacg gaacatcaca cgacgttcaa gttgagaagc
     3361 gatgctatct gcgactaatt tcgcatctag ctctggtttt ttcacttcag cgatgttgat
     3421 ttgagctgga acgccagcga ttttcgcaac tgcgttgcgt aatttttcaa catcttcacc
     3481 ttttttaccg ataacgatac ccgggcgagc tgtgtgaata gttacacgaa tgctttttgc
     3541 aggacgctca atagtgatgc gtgatacaga agcgttcgct aactctttgt ttaaaaattt
     3601 acgtactttg aagtcgccgt ctaagttatc agcgaaatct tgtgtattcg cgaaccaagt
     3661 agagttccaa ggtttaacaa tacctaggcg aataccatta ggatgtactt tctgacccat
     3721 ttgttattct cctacttaat taacgatctg acacaaccac agtgatgtgg cttgtacgtt
     3781 ttaaaatacg atctgcacga ccttttgcac gtggcattac acgtttcatg cttggacctt
     3841 catcaacgaa gattttagca actttaagat catcgacatc tgcaccgtca ttatgctctg
     3901 cgtttgcaat agctgactct aatactttct taacaagcgt cgctgctttt ttgttagtga
     3961 aagttaagat ttctaatgct acagaaactt ttttaccgcg aattaaatca gcaactaagc
     4021 gagctttttg ggcagaagta cgagcgtaac gatgtttagc aatagtttcc atcttttacc
     4081 tcttatttct tagctttctt atctgcggcg tgaccgcggt atgtacgagt cggtgcaaat
     4141 tcacctaatt tatgaccgat catttcgtcg gaaacataaa caggaacgtg ctgacgacca
     4201 ttatggactg cgatggtcaa accaatcatt gatggaatga tcattgaacg acgggaccaa
     4261 gttttaattg gttttttatc cccgctttcc accgccttct ctaccttctt caacaagtgt
     4321 aggtcaagga aaggaccttt cttgagggaa cgtggcattg gtgtttacct tttagttaat
     4381 gaattaaatt atttgccacg acgacgtacg atgaatttat cagtacgttt gttgtgacga
     4441 gttttcttac ctttggtttg aacgccccaa ggtgtaacag gatgtttacc gaagttacga
     4501 ccttcaccac caccgtgtgg gtgatctacc gggttcattg cagtaccacg aacagttgga
     4561 cgaatacctc tccaacggtt tgcacctgct ttaccaagaa cgcgaagcat atgctctgag
     4621 ttacctactt caccaatggt tgcagtacac tcagctaata ctttacgcat ttcgcctgaa
     4681 cgaagacgta aagttacata gttaccttca cgggcaatga tttgaacgta agcaccagca
     4741 gaacgtgcaa tttgaccacc tttaccaggt tttaattcaa cgttgtgtac agttgtacct
     4801 actgggatgt tacgcattgg taatgcgtta cctactttaa tcggagctga agcacccgct
     4861 tgaatttgat caccagcagt taaacctttt ggtgctaaaa tatagcgacg ttcaccatct
     4921 ttataaagta ctaatgcgat attcgcagaa cgatttggat cgtattctaa acgctcaaca
     4981 acacccggaa tgtctaattt attacgttta aaatcaatta aacggtagtg ttgtttgtga
     5041 ccgccaccaa tgtgacgagt tgtgatacga cctaagttgt tacgaccacc agttttagat
     5101 ttagtatcta aaagtgctgc aaaaggttta cctttgtgaa gctcagcgtt tacaacttta
     5161 acaacgtgac gacgaccagc ggaggtcggc ttacatttaa cgatagccat ttattttatc
     5221 tcctctgatt actctgccgc accttcaacg aagtcaagcg attgaccttc ttgaagagtt
     5281 acataagctt ttttccagtc actacgacga ccaactttag caccacggcg tttagtttta
     5341 cctttaacta ctacggtacg aacagaatca acttttactt caaaaagttc ttcaactgca
     5401 tttgcaatct caactttgtt tgcatctaat gcaactttga atacgattgt attgcctttt
     5461 tctgcgttgt ttgtcgcttt ttcagagata tgtggtgctt taagcacgtt tagcaaacgt
     5521 tcttgttgaa tcatgctaac atctcctcaa tttgttttac tgcatctacg gttacaacca
     5581 ctttatcgaa agcaattaag ctaactgggt caataccttg cacatcacgc acatcaactt
     5641 tatataagtt gcgtgctgct aagaataaat tctcatctac gtttgcagta atgataagag
     5701 cgtcatttaa cgccatatct tttaattttt gtgctaatac tttagttttt ggtgcatcga
     5761 tttcgaattt ctcaacaacc actaaacggt cttgacgaac taattcagaa agaatgcttt
     5821 tgattgcacc acggtacatt cttttgttca ctttttggct gtgatcttgt ggtttcgcag
     5881 caaaagttac actacccgaa cgccaaattg gtgatttaat atcaccagaa cgtgcacggc
     5941 ctgtaccttt ttgacgccaa ggttttttac ctgaaccaga cacttcagca cgagtttttt
     6001 gagcacgaga tccttgacga gcacctgctg cataagcaac aactacttgg tggattaatg
     6061 cttcattgaa ctcacgtccg aaggtagttt cagaaacagt tagtgcgttt gcacctacaa
     6121 cttgtaattc catctctatc tcctagactt atgctttaac tgccggtttt acgataacat
     6181 caccattagt tgcaccagga acggcacctt taactaataa taatttacgc tcaacatcta
     6241 cacgaacaac ttcaagtgat tgaacggtta cacgctctgc acctaagtgt cctgccattt
     6301 ttttaccttt aaacacacga cctggagttt ggttttgacc aatagaacca agtacacgat
     6361 gtgataaaga gttaccgtga gttgcatctt gagtacggaa gttccaacgt ttaacaccac
     6421 cttggaagcc tttacctttt gatgtaccag taacatcgac ttttttaaca tcagtaaaga
     6481 tgtcaacatt gatttcttga cctaaagtga attcttcacc ttcagtagta cgaaattccc
     6541 ataaaccgcg tccagcttca acacctgctt tcacgaaatg acctgcttct ggtttagtta
     6601 cacggctagc ttttttagag ccagtagtaa cttgaattgc agagtagcca tcgttttcaa
     6661 gggttttaac ttgagtaaca cggttggctt cgatttcgat aacggtaact ggaatagaca
     6721 cgccgtcttc agtgaaaacg cgggtcatac caactttacg accgattaaa ccaatcattg
     6781 taataacctc ttaaaattcc caattaacct agactaatct gaacgtcaac gccagcagct
     6841 agatctaaac gcattaatgc atcaacagtt ttttctgttg gttcaacaat atcaactaaa
     6901 cgtttgtgag tacggatttc atattggtca cgtgcatctt tattcacgtg tggagaaatc
     6961 aatacagtga aacgttcttt acgagttggt aaaggaattg gaccacgaac ttgtgcacca
     7021 gtacgtttag ctgtttctac gatctccgca gtagattgat caattaaacg atgatcaaat
     7081 gcttttaagc ggatacggat tctttggttc tgcattagac cagagctcca attaaaaaat
     7141 ttagctaata aaaaaaccaa actaccactt aacaaattag ttaagggagc tcagttaaac
     7201 ctatatagtt ccaaaattag gaacattgta tacactacaa tatctgtagt gccatttgat
     7261 aaatgattac atcaaatgtc tttagatacc taaagctttg ctatcatact cgtttcattt
     7321 cccttatgca agtaattttt gttttttata ttgacaataa tttgattcga taaaacttct
     7381 aaagatacac aatatttcca atacttcatt tgaagtggct caaataaatt gtatttatgc
     7441 atttttttat tcaaactttt cgagccactt cacaaatcta aaaaatccta gttgaaattt
     7501 aatccataag agtatttatt attaaataag tttcatgacc ttacatcgga gtacatatat
     7561 gcaaacaatc aatgaaatta aagaagaaat ctaccctata tttgagccta tcattggaac
     7621 aattcggcta aaaacctact tttcctacta cgcagttttt aaggatggat tgatgattgc
     7681 attgtatcaa aatggagcaa cttatttacg tattgcgaaa aaagatattg aatacattcg
     7741 tcagtatcct aaaacctgta tcttatgcga tgaaaaaatt ggtatacaaa gtagaaaatt
     7801 tcattatatt ccgcaagttc tcatagatga tacaccaaaa tttagctcgc tactctttgg
     7861 aattatagag gaactccgaa cggagaagta caaaataagc caaaagcgag ctacacaaat
     7921 ccgaaaccta ccaaatatga atttaaagtt agaaagaatg ttgaaaaaaa tagggattca
     7981 ttccattcat gattttactc aagaagggta tatgtcaact tttatcaaac tgattctcca
     8041 ccgaagactt actgtttaag ctaaacggag ctttaaatca ccaatatatt tacaccttca
     8101 cagatcaaca aaaaagggaa ctaatgcaag aagcaaatca agcgctatat aattcaggcc
     8161 taagaaaaag atttaacgcc ctgtagttaa ataatgtgat ccaaatcata aaatataaaa
     8221 aaaccaataa ggaattgcaa ttcgcagttc ctttcttttt cttttatatg ctagtatcac
     8281 cttatacctc taaattatta gtgcctactg attttcaatt aatccaacaa tttaggagag
     8341 cgcatcatgg aattccgtat cgaaaaagac acaatgggcg aagtgcaagt tcctgccgat
     8401 aaatactggg cggcgcaaac cgagcgttca cgcaataact tcaaaatcgg gccggaggca
     8461 tcaatgccgg cggaaattat cgaggcgttt ggctatctga aaaaagcggc tgcctatgct
     8521 aatcacgatt taggcgtact agcggtcgaa aaacgggatt taattgcaaa agcctgtgat
     8581 gaaattttgg cgaacaaact cgatgatcaa ttcccgctgg tgatttggca aaccggctcg
     8641 ggtacgcagt caaatatgaa cgtgaatgaa gtcgtggcaa accgtgcaca cgtgttaaac
     8701 ggcggcaagc tgggtgaaaa atcgattatt cacccgaatg atgatgtgaa taaatcccaa
     8761 tcttctaacg acacctaccc aactgcaatg cacatcgctg cttacaaaaa agtggtggaa
     8821 cacaccctac cttgtgtgaa acgtctgcaa aaaaccttag cggaaaaagc cgaagccttt
     8881 aaagatgtgg tcaaaatagg gcgtactcac ttaatggatg ctaccccgct cacgctcggt
     8941 caagagttct ctgcctatgc agcacagtta gcattcggca tcaaagcatt ggaaaacacc
     9001 ctgccacacc tgcgtgagct ggcactcggc ggcacagcag tcggcaccgg cttgaatacc
     9061 ccgcaaggtt acgatgtgaa agtggcggaa tacattgcga aattcaccgg tttaccgttc
     9121 gttaccgccc aaaacaaatt tgaggcatta gcgactcacg atgcgattgt cgaaacccac
     9181 ggtgcattaa aacagcttgc ggtgtcgctc tacaaaattg ccaacgatgt ccgtttatta
     9241 gcctccggtc ctcgttcagg cattggcgaa attctgattc cggaaaacga gccgggttca
     9301 tcaattatgc cgggtaaagt aaacccaacc caatgcgaag caatgacaat ggtatgtgcc
     9361 caagtattag gcaacgatgt aaccatctct tttgccggca cgcaagggca tttccaactg
     9421 aatgtctata aaccggtgat ggcgtacaac ttcctgcaat cggctcaact gctaggcgat
     9481 gcgtgcgtgt cgtttgacga acactgtgca gtcggcattg aaccgaacta ccctcgcatt
     9541 aaacaacagc tcgaccaatc gctgatgtta gtgaccgcat taaatactca cattggttat
     9601 gaaaatgcag cgaaaatcgc caaaactgcc cacaaaaacg gcacaacact gaaagaagag
     9661 gcgattaact taggcttagt cacggcagaa cagttcgatg aatgggttcg tccggaagat
     9721 atggttggca gcttgaaata agcccaaccc ttctcttgta atctgattta cacctcaatc
     9781 taccggtaag attgaggtgt aattttttat agcgagggta ctgattttgt tttagaatga
     9841 agcatcattt tttaagcgga aaaacctatg aaaaaactca ttttaatcgc attagttact
     9901 actttaggct taagtgcttg tggggtcaaa ggcccactct acttccctga gcaagcccct
     9961 aaacatgaac aaaaataagc attgcaagcg gtctgttttg gctaaaattt tgcaaatttt
    10021 tgtgaaaaaa tgaccgcttg ttgcctcttt tctttcaaaa tcccaaacac aacggacttt
    10081 caatgaacca ttttgaatat aaaaacaacc aactttttgc tgaagaagtc gctattgccg
    10141 atattatcga gcaatacggc acgccagctt atgtttactc cagatctacc cttgaacgcc
    10201 actggcacgc attcaataat gcgtttggct cgcacccaca tttagtttgc tttgcagtca
    10261 aatccaactc taacattgcc ttgttaaatg taatggctcg tctcggttca ggctttgata
    10321 ttgtctctca aggcgagttg gagcgtgtct tagctgccgg cggcgaagcc tctaaagttg
    10381 tcttttccgg tgtggcaaaa tcgcacagcg aaatcaaacg agcattggaa gtcgggattc
    10441 gttgctttaa cattgaatcg gtttccgaac ttcaccgcat taaccaagtt gccggtgaac
    10501 taggcaaaat cgcaccgatt tcactgcggg taaacccgga tgtggacgcc cacactcacc
    10561 catacatttc caccggttta aaagaaaaca aattcggcgt gagcgttact caagcccgtg
    10621 aagtgtatcg cttagccaaa accttaccga atgtgaaaat taccggtatg gattgtcaca
    10681 tcggttcgca attaaccgaa ttgcaacctt ttttagatgc aacggatcgc ttaatcatct
    10741 taatggagca actgcgtgaa gacggcattg agctacacca cttagactta ggtggcggtt
    10801 taggcgtgcc ttacaacggc gaagagcctc cgcatccgac cgaatatgcc aaagccttgc
    10861 tggaaaagct caaaggctat gaaaacttag aaatcattat tgaaccgggg cgtgccatta
    10921 ccgcaaatgc cggtatttta gtgacgaagg tggaatactt gaaacaaaat gaagatcgta
    10981 attttgcgat tgtcgatacc ggtatgaacg atatgattcg cccggctctg tatgaagcct
    11041 atatgcaaat tacggaagtg gataaaacct taaaccgtga caaagctgtt tacgatgtgg
    11101 tcggtccgat ttgcgaaacc tcggatttct taggcaaaca aagagaattg gcaatttctg
    11161 aaggggattt aatcgctatt cgttctgccg gtgcttatgg ggcggcgatg tcttcaacct
    11221 acaactctcg cccacaagcg gcagaaatta tggttgatgg caaccaagcc catttaatta
    11281 aagcccgagc cacttttgct gatttatggc gtttagaaaa attattacct taatgaggaa
    11341 gaaaagatga aattatatgg attaaccggt gcttgttcat ttgtaccaca cgttgcccta
    11401 gagtgggtga aattgcgtgc caatcaagat tatgcgtttc aagctgttag ccgtgaattt
    11461 attaaatcgg cggaatatct ggctttaaac cctcgtggta acgtaccatt gttggttgat
    11521 ggcgacttgg ccctcacgca aaaccaagct atcgtccact atttagacga gctttatccg
    11581 gaagctaaat tattcggcag caaaaccgct cgtgataaag ccaaagcggc tcgttggtta
    11641 gcttttttca attcagatgt gcataaatca ttcgtgccac tgttccgctt gccaagttat
    11701 gcggaaggca atgaaacgct caccaaaact attcgccaac aatcggctga gcaaatttta
    11761 gaacaactgg cttttgcgaa tgctcattta gaaaatcata ttttctttgg cgaagaaatt
    11821 tcggttgccg atgcgtatct ctacattatg ctcaactggt gtcgcctact agggttggat
    11881 ttctctcatc tttcccaact ttctgccttt atgcaacgag tggaggcaga ccaaggcgta
    11941 gataatgtgc gtgagcaaga aggcttaaaa ggttaattca ccattgttca tttaagacgg
    12001 tagattttat gttaaaatct accgtctttt atttttagga atcaccatgc taaatcaggt
    12061 ttcaaacagc ttgcttgctc caagtgggct tgaattatcg cacttaactc aagtgttaga
    12121 tcacttctcc ggccgtcata ttgattatgc cgatctctac ttccaactca gccaagacga
    12181 aagctggagc ttggaagaca gcatcatcaa agaaggcggt ttttatatcg accgagggtt
    12241 cggtgtgcga gccatatcag gcgaaaaaac cggctttgcc tacgccgatc aaatcacgtt
    12301 aaaacagctt gagcaatgtg ccgctgccgc acgttcaatc agcccaacaa gcggtcaatt
    12361 atcggtaaaa aatttcaaaa aaacgaccgc ttgttctcgc tacccggcaa tcaacccgct
    12421 agagaccatc agccgtgaac aaaaggtcga attgctccat ttggtggata aaaccgctcg
    12481 aatggcagat ccgagagtga ttcaagtgaa tgcgaatctc tcagcggtat atgaagaaat
    12541 gttagtggca gcgactgacg gcacactggc tgcggatatt cgcccgttag tgcgtttatc
    12601 tgtgtcggta ctggtggaac aaaatggcaa gcgtgaacga ggttcagcag gtgccggtgg
    12661 tcgctttggt ttagattggt tcttagcacc aagcgaaacc ggctttagcc gtgcggaatc
    12721 gcttaccaaa gaagccgttc gccaagccct cgttaatctc acagccattc ctgcaccggc
    12781 aggcacgatg ccgattgttc tcggtgctgg ctggccgggc attttgctcc acgaagcagt
    12841 cggacacggc ttggagggtg attttaaccg taaggaatct tcgctcttca gtggtaaaat
    12901 cgggcaaatg gtcacctctg agctttgcac cattgttgat gacggtacgg tgccgaatat
    12961 gcgaggctca atcacggtag atgacgaagg cgtgccttcg caacgtaatg tgttaattga
    13021 aaacggcatt ctaaaaggct atatgcaaga caaactcaat gcccgcctga tgggagttgc
    13081 cccaaccggc aacggcagac gggaatctta cgctcatttg ccgatgccac gaatgaccaa
    13141 cacctacctc accgaaggca atcacgaatt tgaagagatg attgaatcgg tcgaatacgg
    13201 tttatatgct cctcacttca gtggtggaca agtggatatt acctccggca aatttgtgtt
    13261 ctccaccgcc gaagcctact taatcgaaaa aggcaaaatc accaaacctg ttaccggtgc
    13321 aaccctgatc ggcagcggca tagaagcaat gcaacaagtt tcaatggtcg gcaaaaaaat
    13381 ggaactcgac cccggcatcg gcacttgtgg caaagaaggg caatccgtac cagtcggcgt
    13441 agggcagcct acagtgaagt tggataaaat tacggtgggg ggaagagggt aatctctccc
    13501 cgtttgcaaa atataaagaa aatatcaccg cttgtagcga taaaaggaaa acaaaatggc
    13561 ttgggtacaa attcgtttaa acagtacaga taaacaggct gaggaaatca gcgatttttt
    13621 aaccgagatt ggagcggtgt cagtgacttt tatggatagt caagataccc caatttttga
    13681 acctcttccg ggggaaaccc gtctttgggg aaataccgat gtggttgggc ttttcgatgc
    13741 ggaaactgat atgaatctta tcgtagaagc actaaaaacc agcaaattgg tggacgaaaa
    13801 ctttgctcac aaaatcgagc aaatcgaaga caaagactgg gaacgggagt ggatggataa
    13861 tttccaccca atgcagtttg gcaaacggtt atggatctgc ccaagctggc gtgaagtacc
    13921 agacccgaat gcagtgaatg ttatgttaga ccctggttta gcatttggca ccggcacaca
    13981 cccaacgacc tcgctttgct tacaatggtt agatagctta gatttagaag gcaaaacggt
    14041 tatcgacttc ggctgtggct ccggtatttt agctatcgct gcacttaaac tcggtgcaaa
    14101 acaagccatc gggattgata tcgacccaca ggcgatttta gctagtcaaa acaatgctga
    14161 ggcgaacggc gtagcagaaa aactacaact attcttagcc aaagatcagc caagagagtt
    14221 acaagccgat gtcgttgttg cgaatattct agccggccca ctcaaagagt tagcaccgaa
    14281 tatcatcacg ctggttaaac caaacggcaa tttaggctta tccggcattc ttgctactca
    14341 ggctgaaagt gtgtgtgagg cttatagcga agcctttacg ctagaccctg ttgtagaaaa
    14401 agaagaatgg tgtcgtatta caggccgcaa aatctaatat aagaagccct gttttaaaca
    14461 gggcttactt tttgataaat tctactactc tttacctgtc ttgggaatcg ttctccctaa
    14521 attaattaac acaagcggta gaaataacag gaaaatttac aaattacata aatgaaaaaa
    14581 gccgactgaa atcagtcggc tttctaaata atggcagggg cggagaggct cgaactccca
    14641 acacccggtt ttggagaccg gtgctctacc aattgaacta cgcccctatt gataggtatt
    14701 cattttgcac ttataggggc gaattactat tcgcccctgc attaaagatt attggcggaa
    14761 cggacgggac tcgaacccgc gaccccctgc gtgacaggca ggtattctaa ccagc
//
LOCUS       DANLTI010000067        14582 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.067, whole genome shotgun sequence.
ACCESSION   DANLTI010000067 DANLTI010000000
VERSION     DANLTI010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14582
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.067"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..588
                     /locus_tag="PXB09_001559"
     CDS             <1..588
                     /locus_tag="PXB09_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5233671.1"
                     /translation="GDYLESSDAQIFRDKYQELEFKPNPDFNGPYYGLDFGFANDPTA
                     CVKCWVFDDDLYIEREAGKVRLELDETAAYLANALPDLSNYTVRADSARPESISYLKR
                     HGLPYIQPVPKWKGSVEDGVEHIKSYRKVYIHPSCTEVLKEFRLYSYKTDRLSGDVLP
                     IIIDAHNHYIDAIRYALNPLIQARGEAKQCALKVY"
     gene            601..2004
                     /locus_tag="PXB09_001560"
     CDS             601..2004
                     /locus_tag="PXB09_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HDL5233672.1"
                     /translation="MPNSISADFAALKAKTKIIDDLLGGTQKMRQAGQTYLYKMKMEE
                     EDGYKNRLNRSTLYPALRETLSQMLGRVFFNPINVEDVHKQIEPLFDDIDLEGNNLDV
                     FASRWFYAALAYGVSYCLVDFVRVENARSLAEEKAQNARPYLVHIKPQQVLGFKTAKI
                     NGKTAFTQFRYKETVTEDDGEFASKQVNYIYVYEIGRVRKYKNDEGGLSLVADMQIKA
                     QNTPLAFVPIVPFITKPIDVWGMGEPPLMELAYLNIKHWQSQSDQDNILNIARVPLLA
                     IFSDTQIKSLEIGSSAISLPKDSTMQFIEHSGSSINAGLTSLKELEDQMKTAGAKLLT
                     KTALAMTDSQAKDEAGKEISQLRHYANKFEDALDLAFEYIGHWLGIGVDEVGTSQISG
                     NIDNDLDPNASMATIIQLRNAGVISNHSTFEEAKRRGLLSDSAKWEDEQARLQAEGLS
                     DDFTNPFNSNQSENAAS"
     gene            1952..3613
                     /locus_tag="PXB09_001561"
     CDS             1952..3613
                     /locus_tag="PXB09_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5233673.1"
                     /translation="MTLQIHSIRTKVKTPLAKRIAHALTDRKILQFRFDAHLRNQVWQ
                     RLTKTQKALLNRINAAGIDALPKRELDKLLKELKAEIAKNYQETTAYIQPELSGFFAV
                     EKQALTELYNDEIGYDFFNQVPSYQRKATQQATIIAGMPLESWFEKQGSELSFKFEST
                     IRQGLLEGRQTPEIAKATAELFGISRRHADTLVITAVAKVADDAHKALRDENLDLIKG
                     EMHLSTLDTRTSTVCQVRDGKMWDTDYKPIGHSLPYQRPPLHPRCRSILQLVMKDWKE
                     LGFDDVKEMPKSTRASADGQVSEKTNYEEWLSSKTPEEQDKALGKGKADLWRRGVITF
                     SDMLDQSARPLTLKELYSLKNSSSVDKMDSVELVRKKAVAVEPMITRDVVSIITASGG
                     EPAGLDFRLKSLSSLQRKIDTEIMAGVSKEQAIASIRDVIRYTAILDEQRFVEQYQKM
                     QKDLEKQGYSTIIVKNTWKSNNAYKGINTFVSTFIEKNNIIFELQYHTKQSFELKNGK
                     LHELYEKFRDLNIPLAKKSEILLEMQKLSANLKEPKNIDLIKEKK"
     gene            3613..3831
                     /locus_tag="PXB09_001562"
     CDS             3613..3831
                     /locus_tag="PXB09_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233674.1"
                     /translation="MYQYYLAQVGNEQQKLIRGMPDNLLSFSVYEPEQEDWDNKFGPF
                     WADKILISGFDAYEEISEKEAIRFIKVH"
     gene            3832..4245
                     /locus_tag="PXB09_001563"
     CDS             3832..4245
                     /locus_tag="PXB09_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDL5233675.1"
                     /translation="MCQAEQFARQLHYGQTDKAGKPYIEHLAFVAENISTKNEETEAV
                     AWLHDSVEDTQCSINDIRHIFGDVIADAVEAITKKQGESYFCYLDRVKSNPIAKVVKL
                     ADLTHNLCLERLPKITEKDLKRAEKYKSALEYLQA"
     gene            4363..5097
                     /locus_tag="PXB09_001564"
     CDS             4363..5097
                     /locus_tag="PXB09_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233676.1"
                     /translation="MKLKLDENGHVVVENGMPVYIHDDGKEIPFDALKATQKITQLNA
                     EAKQHREAKEKAEADLKAFSGIDDPKAALEALKTVANLDAKKLIDAGDAEKVKAEIIK
                     GYDEKLAVATAQAEKLQQQLHAELIGGSFARSKYAQEHLNIPSDVVQAFFGKHFSISD
                     DGKVVAKFADGGEIFSRTRPGEKADFEEALEALVSAYPNKDAILKPSGSSGAGAGGGS
                     RSSSMPKTLSDCKTDEERIAYLQANS"
     gene            5163..6110
                     /locus_tag="PXB09_001565"
     CDS             5163..6110
                     /locus_tag="PXB09_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233677.1"
                     /translation="MAFDLQVFNKQTQLALTETVDQAIEKFNAASGGAIILQNKPAEG
                     DFDIRASFKGIAGLVRRRNVYGTGTVDAKRLEQLLDVAVKVAAGTAPIEYQPSQYKWI
                     LLNPELAAIEIGTQLAKARVADMLNTAIAGTVAAISGNTAMTLDEKTAAPTFRILNKG
                     AAKMGDRAGSLKAWVLHSTTLHGLYDNALTNAENLFKYENVNVIRDPFGRVFVVTDSP
                     ALMASDGTFNTLGLVENAVVVSGNNDFDSVLVPKTGGENLSAVYQAEWTYNLGILGYK
                     WDMTAGGKSPNDTALGTPTNWDKSVTSNKDTAGVLVKTK"
     gene            6170..6520
                     /locus_tag="PXB09_001566"
     CDS             6170..6520
                     /locus_tag="PXB09_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233678.1"
                     /translation="MKRILYFTTDFSAKNIAFAKAHGVLMRNLNAYHPSDTLENADAV
                     CGNVPQAYQHLPLFELPESNQKSGQDLKTLKTEEIKEKLTELGIAFEANAKKETLLTL
                     LTQAVGRDGTNDAK"
     gene            6510..6947
                     /locus_tag="PXB09_001567"
     CDS             6510..6947
                     /locus_tag="PXB09_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233679.1"
                     /translation="MLNSYMTVEQANAYHDIRMSREAWNALSDQEKQQRLVSASDFLD
                     FNYRFSGEKADLTQEREFPRKGFEAIGIPKAVQFAVCELALQDNLTANQEAQMSSVRV
                     GPVSVNYDNSSPQNSVNRFEYVRQLLSTWLDRSSFGTVKLERS"
     gene            6947..7318
                     /locus_tag="PXB09_001568"
     CDS             6947..7318
                     /locus_tag="PXB09_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233680.1"
                     /translation="MADFYGNLGKISHSLIKQFGQPCSVTINEQGRYNPATGERKKGS
                     STVHAGYCLFDNLAFDFRNQQSVSVQQGDVMIYLTADCKPVLNAVIEANGEKWSVINV
                     QPIRPAATTMIYQVQGRKADG"
     gene            7311..7724
                     /locus_tag="PXB09_001569"
     CDS             7311..7724
                     /locus_tag="PXB09_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5233681.1"
                     /translation="MGSFHAQIARFVEQTQQKADRALRVIALQTLSGVQKKSPVDTGQ
                     LRRSWTVALNGFPSSYNGSQTVLNSAKFGDMIVIATNKPYAPMLEYGLYPNPPKKPTG
                     KTKNGYSIQAPNGMVRITVQEMQAFIRNNPQLGVS"
     gene            7724..8116
                     /locus_tag="PXB09_001570"
     CDS             7724..8116
                     /locus_tag="PXB09_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233682.1"
                     /translation="MRPIIRSVLEQHLAELNPFNTVWEGIIDSPKLPYQTVSMTTSTN
                     ETATIGNTPKAKQSGFLQVTLYYPLDQGTKAIEERADEIFRHFFGQVWIEENVQILVQ
                     QPPLVASLYRLDNSIALPITIYFTAYEL"
     gene            8126..9148
                     /locus_tag="PXB09_001571"
     CDS             8126..9148
                     /locus_tag="PXB09_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233683.1"
                     /translation="MSILGNSQGTKRTVVFAKESSFGTKAAPTGAKIMPRVETSLNTN
                     FESYQSEEIRDDLQRSASVIGFEKVEGDIKGELAAGQWAAFFAAALRGSFTAQAKKPI
                     ITKTTDGTGEKNGKILIVPKTSHTSDSFTLEDVFKDINVSRQYLGCRVSKLSLDVQPN
                     GIASITVSFLGQRGEESTTAYFTNPTDLTQSGKLAGVKGSLQVNKRPVGLVTAFKLDI
                     DLGASSEPVLGAKYAPDVFIGTVAVSGSFTMYFQDKTMIDAVRNGTDLSLALRMDAEE
                     RTNTDYLTIILPGVKVTSNELDDGAKNIMQTLNFDAFPAVWDSASQIDNVLKVATTMI
                     VQDSLA"
     gene            9238..9639
                     /locus_tag="PXB09_001572"
     CDS             9238..9639
                     /locus_tag="PXB09_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233684.1"
                     /translation="MNLNALSKEKQLAEHRFELVHPVSGEPLGVFMSVVSAKSDKAQR
                     FAEKQLRQEQMRELENAKSRKPKFKGLGDMIAESRAMAIDRLTGWENVEWNEKPLEFS
                     DQNAELLLTECDWIVEQIFEHSNDLGKFLKS"
     gene            9654..9980
                     /locus_tag="PXB09_001573"
     CDS             9654..9980
                     /locus_tag="PXB09_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233685.1"
                     /translation="MYAEKTFKLDKKLKGSESTLREHLQAIEMQTGITPEELHNPEPS
                     PAVAYLLGWFFELAMSRQSGMSLNPISYTEIDAWSRLFARHLEQWEISVIKQLDMIYL
                     NVQQTE"
     gene            9982..10305
                     /locus_tag="PXB09_001574"
     CDS             9982..10305
                     /locus_tag="PXB09_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5233686.1"
                     /translation="MDTFNFQPNWGLNVQRKPEVMKIAFGDGYEQVAPKGLNHNLRTY
                     SAVFTGTEARIKQIEAFFERQGGYKAFLWTPYGGKEGKFRCEEWEVSISSGKWTLSAT
                     IREVL"
     gene            10392..11084
                     /locus_tag="PXB09_001575"
     CDS             10392..11084
                     /locus_tag="PXB09_001575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233687.1"
                     /translation="MKKIFVSALLLTCSLSALGNSSYELIIDSMQDLEKHKPEILSIP
                     EADRNTFIRYMMRKELRIKLNQGRLADGLTVREAIQNQQAFEKDRNSKMQQEKQKKET
                     EKAEKEKAVTDFNQKFELSITGARKAKNALNQDILLVSLSLKNNSDKPIIAVQPDIQF
                     VLGEDKQTISSMRPKKFENGIPPNGSEIFEFGFDLDDMFALKAEKNIEKLRAVFQTAE
                     VLFADGTTEKLQ"
     gene            11148..11972
                     /locus_tag="PXB09_001576"
                     /pseudo
     CDS             11148..11972
                     /locus_tag="PXB09_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015691083.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
     gene            14016..14174
                     /locus_tag="PXB09_001577"
                     /pseudo
     CDS             14016..14174
                     /locus_tag="PXB09_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            14182..>14582
                     /locus_tag="PXB09_001578"
     CDS             14182..>14582
                     /locus_tag="PXB09_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5233688.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRNLKDKSGNAGRVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADP"
BASE COUNT         4615 a         2800 c         3397 g         3770 t
ORIGIN      
        1 ggggactact tagaatcctc tgatgctcaa atctttagag ataaatacca agaattagaa
       61 tttaagccta accctgattt taacggtcct tattacgggc tggactttgg ttttgccaat
      121 gacccaacag cctgtgtgaa atgttgggtg ttcgatgatg acttatatat cgagcgtgaa
      181 gcagggaaag taagactaga gctcgatgag accgctgctt atttagcaaa tgctttgcct
      241 gatttgagta attatactgt tagagcagat tctgctcgcc cagaatccat cagttattta
      301 aaacgacatg gattgcctta tattcaacct gttccaaagt ggaaaggctc agtcgaagat
      361 ggggttgagc atataaaatc ttatcgtaaa gtatatattc atccaagttg tacagaggta
      421 ttgaaagaat ttcgccttta tagttacaaa acggacagat taagtggtga tgtactgcct
      481 atcattattg acgctcataa ccactatatt gatgccattc gttatgcctt aaatcctctt
      541 attcaggcaa gaggcgaggc gaagcaatgt gcattaaagg tttattaaaa tgaggtaaca
      601 atgcctaact ccatctcagc cgattttgcg gcattaaaag caaaaacaaa aatcatcgat
      661 gatttactcg gtggcacaca aaaaatgcga caagcgggtc aaacctacct ctataaaatg
      721 aaaatggaag aggaagatgg atataaaaac cgattaaatc gttctacgct ttatccggca
      781 ttgagggaaa cgctttcgca gatgttgggg agagtgtttt ttaatccgat caacgtagag
      841 gatgtgcata aacaaatcga accattgttt gatgatattg atttagaggg taacaatctt
      901 gatgtattcg cttctcgttg gttttatgct gcattggctt atggcgtatc ttattgcttg
      961 gtggattttg tgagggtaga gaatgcccgc agtcttgcag aagaaaaagc tcaaaatgca
     1021 cgtccgtatt tggtgcatat taagccgcaa caagtgctgg gctttaaaac agccaaaatc
     1081 aacggtaaaa ctgcttttac ccaatttcgt tataaagaga cagttacaga agatgatggc
     1141 gagtttgctt ctaaacaggt gaactacatt tatgtttatg aaatcggacg tgtccgaaaa
     1201 tataagaacg atgagggtgg cttatcactg gttgctgata tgcaaatcaa agctcaaaat
     1261 acaccgcttg catttgtgcc tattgttcca tttatcacta aaccgattga tgtttgggga
     1321 atgggtgagc cgcctttaat ggagctggct tatttaaata ttaagcactg gcaaagtcag
     1381 tcagatcaag acaatatttt gaatattgct cgtgtaccgc tattagctat tttctctgat
     1441 actcaaataa aatcccttga aatcggctca agtgcaatat ctctgccgaa agacagtaca
     1501 atgcagttta ttgagcattc aggttcgtct attaatgccg gtttaaccag tctgaaagaa
     1561 ctagaagacc aaatgaaaac tgccggtgcg aaactgctaa ctaaaacagc attagcaatg
     1621 acggatagtc aggctaaaga tgaagcaggt aaagagatct cacagcttag acattatgct
     1681 aacaaatttg aagatgctct cgatttggct tttgagtaca ttgggcattg gctaggtatc
     1741 ggcgttgatg aagttgggac ttcgcaaatt tcaggcaata tcgacaatga tttagatcca
     1801 aatgcgtcaa tggcaaccat tattcagcta cgcaatgccg gtgtcatttc aaatcactct
     1861 acgtttgaag aagctaaaag acgaggttta ttgtcagata gtgcaaaatg ggaagacgaa
     1921 caagcaaggt tacaagcgga aggtttaagc gatgacttta caaatccatt caattcgaac
     1981 caaagtgaaa acgccgctag ctaaacggat cgctcacgca ttaacagatc gtaaaatatt
     2041 gcagttccgt tttgatgctc atttacgaaa tcaagtttgg caacgactca caaaaacgca
     2101 aaaggcatta ttaaaccgaa ttaatgcagc cgggatagat gccttaccga aaagagagtt
     2161 ggataaactg ctcaaagaac tcaaagcaga aattgcaaaa aattaccaag aaacgaccgc
     2221 ttacattcag cctgaattaa gcggtttttt tgcggttgaa aaacaggcac tgactgagct
     2281 ttacaatgat gaaatcggct atgatttttt caatcaagtg ccgtcatatc aacgtaaagc
     2341 tacgcaacaa gcgactatta ttgccggaat gccgcttgaa agttggtttg aaaagcaagg
     2401 atcagagctt tcgtttaaat ttgaaagcac cattcggcaa ggcttgttag agggtaggca
     2461 aacgcctgag attgccaaag ctacggctga attatttggt atatccagac ggcacgctga
     2521 tacacttgtc attactgctg tggcaaaagt ggcggacgat gctcacaagg cattgcgaga
     2581 tgaaaatctt gatttaatta agggtgagat gcacttatca acgctcgata cccgcaccag
     2641 tactgtttgt caagtgcgag acggtaagat gtgggacact gattacaagc ctatcggaca
     2701 cagtttgccg tatcaacgcc caccacttca ccctcgctgt cgttcgattc tgcaactggt
     2761 gatgaaagac tggaaagagt taggctttga tgatgtgaaa gaaatgccga aaagcactag
     2821 ggcgagtgca gacgggcaag tgtcggagaa gacaaactat gaagagtggc tcagtagcaa
     2881 aacaccggaa gagcaagata aagcgctagg caaaggcaag gcggatttgt ggcggcgggg
     2941 agtgataacg tttagcgata tgttagatca aagtgctaga ccattgacac taaaagagct
     3001 atattcatta aaaaatagtt cttcggtaga taaaatggat agtgtggaac ttgtccgtaa
     3061 aaaggctgtt gcagttgagc ctatgattac tcgtgatgta gtatcaatta ttacagcatc
     3121 tgggggcgag cctgccggct tagattttcg cttgaaatca ctatcatctt tgcagcgaaa
     3181 aattgatacg gaaataatgg ccggagtgtc aaaagagcaa gcgatagcaa gtattcgaga
     3241 tgttattcgc tacactgcaa tcttagatga acagcgtttt gttgagcaat accaaaaaat
     3301 gcaaaaagac ttggagaaac aaggttattc tacgatcatt gttaaaaaca cttggaaatc
     3361 aaataatgct tataagggca ttaatacgtt tgtgagcact tttattgaaa agaataatat
     3421 aatttttgaa ttgcaatatc atacaaaaca aagttttgag ttgaaaaacg gtaaattgca
     3481 cgagctctat gaaaaattca gagatctgaa tatacctctt gcaaaaaaat cagaaatttt
     3541 acttgaaatg cagaagttaa gtgctaatct aaaagagcca aagaacattg atttaatcaa
     3601 ggagaaaaaa taatgtatca gtattattta gctcaagttg gcaatgaaca gcaaaaactt
     3661 attcgtggta tgcctgacaa tctacttagt ttctcggttt atgagcctga acaagaagat
     3721 tgggataata agttcggccc attttgggca gacaagatct tgataagcgg atttgacgct
     3781 tacgaggaaa tttcagaaaa ggaagcaatc cgatttatca aggtacatta aatgtgtcaa
     3841 gctgaacaat tcgctcgcca actgcattat ggacaaacag ataaagctgg aaagccatac
     3901 attgagcatc ttgcttttgt tgcagaaaac attagcacaa aaaatgaaga gacagaagca
     3961 gtagcttggt tgcacgacag tgtagaagat actcagtgtt caattaatga tattcgtcat
     4021 atatttggcg atgttattgc tgatgcagtt gaggctatta ctaaaaagca aggcgaaagt
     4081 tatttttgct acttggatag agtaaaatca aatcctattg ctaaggtggt taagttagct
     4141 gatttgactc ataatctttg ccttgagcga ttgcccaaga tcactgaaaa ggatcttaaa
     4201 cgagcagaaa aatacaaatc agcattggaa tatctacaag cctagcctaa aacgctaggc
     4261 ttttttatcg caatttttta ccccaaactg accgtttgtg agccatcaca ggcggttttt
     4321 tattatcggg cggaagccca ccagcaatga gaggaagctc aaatgaaatt aaaattagac
     4381 gaaaacggac atgtagtagt tgaaaatggt atgcctgtgt atattcacga tgacggaaag
     4441 gaaattccgt tcgatgcact aaaggcgaca cagaaaatca cacaactgaa cgctgaggca
     4501 aagcaacatc gagaagctaa agagaaagcg gaagccgact taaaagcatt ctcagggatt
     4561 gacgatccga aagctgcact cgaggcatta aagacggttg ccaatttaga tgctaaaaag
     4621 ctgattgatg ccggtgatgc ggaaaaagtc aaagcggaaa tcatcaaagg ttacgatgag
     4681 aaattagctg tggcaaccgc tcaagccgaa aaactgcaac agcagttaca cgctgaatta
     4741 atcggtggtt cgtttgctcg gtctaaatac gctcaagaac acttgaatat tccgtctgat
     4801 gtcgtacagg cattcttcgg taagcatttt agtatttcgg atgacggcaa agtggtagct
     4861 aaatttgctg acgggggcga aatctttagt cgcacccgcc cgggcgaaaa agcagatttt
     4921 gaagaggcat tagaagcttt agtaagtgct tatccaaata aagacgctat tttaaaacca
     4981 agtggttcaa gtggggcagg agcaggtggc ggatcacgca gttcatctat gccgaaaaca
     5041 ttatcggact gcaaaacaga tgaagagcgt atcgcttatc ttcaagcaaa ttcgtaaggt
     5101 gcaagaggtt gcaccttttt tattttcggt gcaatcgcac cactttttag aggaaaatca
     5161 aaatggcatt tgacctacag gtttttaaca aacaaacgca attagccttg accgaaactg
     5221 tcgatcaggc tattgaaaaa ttcaatgcag catcaggcgg tgcaatcatt ttacagaaca
     5281 agccagctga aggtgatttt gatatccgtg ctagctttaa aggtattgcc ggtttagttc
     5341 gccgccgtaa tgtgtacggt acaggtacgg tagatgcaaa acgtttagag caattactgg
     5401 acgtagcagt taaagtggcg gcaggtacag caccgattga ataccagccg agtcaatata
     5461 aatggatttt attaaatcct gaattggcgg cgattgaaat cggcacacaa cttgccaaag
     5521 cccgtgttgc tgatatgctc aatacggcta ttgccggcac ggttgctgca attagtggca
     5581 atacagcaat gacacttgat gaaaagaccg ccgctccgac attccgcatt ttaaacaaag
     5641 gtgcagcgaa aatgggtgat cgtgccggtt cgcttaaagc gtgggtgttg cactccacaa
     5701 ccttacacgg cttatacgat aatgccttaa ccaatgcgga aaacttattc aagtacgaaa
     5761 acgtgaacgt aattcgtgac ccgtttgggc gtgtatttgt cgtcacagac agcccggctt
     5821 taatggcttc agacggtaca tttaacacct taggcttggt tgaaaatgcg gtggtagttt
     5881 ccggcaacaa tgactttgac agcgtgttag tgccgaaaac cggcggagaa aacctttcag
     5941 cagtttacca agctgaatgg acctataact taggaatcct aggttataaa tgggatatga
     6001 ccgctggtgg taaatcaccg aacgataccg ccctaggcac accgacgaac tgggataaat
     6061 cggttacctc caacaaagac accgccggtg tattggtaaa aacgaagtaa tttttaaccg
     6121 cttgtagata aggtttacaa gcggttgttt ttttatctgg agtttgcaaa tgaaacgaat
     6181 actttatttt acaacggatt tttcggcaaa aaacattgcc tttgccaaag ctcacggtgt
     6241 attaatgcgg aatctgaacg cttaccaccc atcagacacc ttagaaaatg cagatgcagt
     6301 gtgcggtaac gtacctcaag cttatcaaca tttaccgttg tttgaattgc ctgagtctaa
     6361 ccaaaaatca ggtcaagatt tgaaaacctt aaaaaccgaa gaaattaagg aaaaactgac
     6421 tgaattaggt attgcttttg aggcgaatgc caaaaaagaa acattactaa ccttactcac
     6481 tcaggcggtg ggacgtgacg gaacaaacga tgctaaatag ttatatgacg gttgagcaag
     6541 ccaacgccta tcacgacatc agaatgagcc gtgaggcgtg gaatgcgtta agcgatcaag
     6601 aaaaacagca acgattggtg tcagcgtctg attttctgga tttcaattat cgtttttcag
     6661 gcgaaaaagc agatcttact caagagcgtg aatttccacg caagggtttt gaagctatcg
     6721 gtattcctaa agccgtgcaa tttgcggtat gtgagttggc attgcaagat aacttgaccg
     6781 caaatcaaga agctcaaatg agtagcgtaa gagttggccc ggtttcagtt aattatgata
     6841 acagttcacc gcaaaacagc gtgaatcggt ttgagtatgt gaggcagttg ctttccactt
     6901 ggttagatcg atcttctttc ggcacggtta agttggagcg tagttgatgg cggattttta
     6961 cggcaattta gggaaaatct cccattcttt gattaagcaa ttcgggcagc cttgtagtgt
     7021 aacaattaac gaacaaggca gatacaaccc tgcaaccggt gagcggaaaa aaggtagctc
     7081 aacggttcac gcaggctatt gtctgtttga taatttggcg tttgatttcc gcaatcagca
     7141 atctgtcagc gttcaacaag gcgatgtgat gatttatctc actgccgatt gcaaaccggt
     7201 attaaatgct gtgattgaag caaacggcga aaaatggtcg gtcatcaacg tccagcctat
     7261 acgcccagca gctaccacga tgatttatca agtacaaggg agaaaagccg atgggtagtt
     7321 ttcacgctca aatcgcccgt tttgtggaac aaacgcaaca aaaagcggat agggcgttaa
     7381 gggtaattgc cctgcaaacc ttaagtgggg tgcagaagaa atcgcctgtc gataccggac
     7441 aacttcggcg tagctggacg gtggcattaa atggtttccc gagcagttat aacggcagtc
     7501 aaaccgtgct gaatagtgct aaattcggcg atatgattgt gattgctacc aataaacctt
     7561 atgcaccaat gctcgaatat gggctttacc cgaacccacc aaaaaaaccg accggcaaga
     7621 ccaaaaacgg ttattcaata caagcaccta atggaatggt gcgaattacc gtgcaggaaa
     7681 tgcaagcctt tatccgcaat aatccacaat taggagtaag ctgatgcgac cgattatccg
     7741 ctcggtatta gagcaacatc ttgccgaact caatccgttt aatacggttt gggagggcat
     7801 catcgacagc ccgaaactgc cgtatcaaac cgtatcaatg acgacttcaa ccaacgaaac
     7861 cgccacgatt ggtaatacgc cgaaagccaa acagagcggt tttttgcagg tcacgcttta
     7921 ctatccgcta gatcagggga caaaggcgat tgaggaacga gccgatgaga tcttccgcca
     7981 ctttttcggg caggtctgga ttgaggaaaa tgtgcaaatt ctggtgcaac agccaccgct
     8041 tgtagcctca ctttatcgac tggataacag cattgcctta cccatcacca tctattttac
     8101 cgcttatgaa ctataggaga acccaatgtc tattctaggc aattcacaag gcacaaaacg
     8161 tacggtcgtt tttgccaaag agagttcttt cggcacgaaa gctgctccga caggcgcaaa
     8221 aattatgcct cgtgttgaaa cctcactcaa taccaatttt gaaagttatc aatcggaaga
     8281 gatcagagat gatttacaac gctccgcctc tgtgatcggc tttgaaaagg tcgaaggcga
     8341 tattaaaggc gaactagccg ccggacaatg ggcggcattt tttgcggctg cattacgtgg
     8401 ttcatttacc gctcaggcga aaaagccgat tattaccaaa accacagacg gcaccggcga
     8461 gaaaaacggt aaaattttga ttgtgccgaa aaccagccac acctccgaca gtttcacgct
     8521 ggaagatgtc ttcaaagaca tcaacgtcag ccgccagtat ttgggatgtc gtgtatcgaa
     8581 actcagcctt gatgtgcaac caaacggtat tgcctcgatt acagtctcat ttttagggca
     8641 acgaggcgaa gaaagtacaa cagcctattt taccaatccc accgatttaa cccaatccgg
     8701 caagctggca ggggtaaaag gctcattgca ggtcaataaa cgcccagtcg ggttagtgac
     8761 ggcctttaaa ctggacattg atttaggggc aagcagtgag ccggtattag gggcaaaata
     8821 cgcccctgat gtctttatcg gtacagtggc agtgagcgga tcgtttacga tgtacttcca
     8881 agacaagacg atgattgatg cggtgcgtaa cggcacagat ttatcccttg ctttgcggat
     8941 ggatgccgaa gagcgtacca ataccgacta tttaaccatt atcttaccgg gtgtcaaagt
     9001 gacctcaaac gagttggacg atggggcgaa aaacattatg cagacactca attttgacgc
     9061 attccctgcg gtatgggatt cagcaagcca aatcgacaac gtgctaaaag tcgccaccac
     9121 aatgattgtg caagacagcc tcgcttaatc gaaattttgc aaaaaaataa ccgtatctaa
     9181 ccgcttgccc tcaaacaagc ggtctttttt atccccaatt tacaaaagga aacccaaatg
     9241 aatttaaacg cattaagtaa agaaaaacag ttagccgaac accgttttga gctggttcac
     9301 cctgttagtg gcgaaccgct cggcgtgttt atgagcgtcg tgagtgctaa gagtgataag
     9361 gctcaacgct ttgccgaaaa acaattacgc caagaacaga tgagagagct ggaaaatgcc
     9421 aaatcccgca agccgaaatt caaaggctta ggcgatatga ttgccgaaag tcgtgcaatg
     9481 gcgattgacc gcttaaccgg ctgggagaat gtcgaatgga acgaaaaacc gttggagttt
     9541 tccgaccaga atgcggagct acttttaacc gaatgtgatt ggattgtgga gcaaatcttt
     9601 gagcattcga acgatctggg aaagttcttg aagagctaat tgatgattta caggtgtatg
     9661 cagagaaaac gtttaagttg gataaaaaac ttaaaggcag cgaaagtacc ttgcgagagc
     9721 atttgcaggc aatcgaaatg caaactggca ttacaccaga agaattgcat aaccctgaac
     9781 ccagtccagc ggtggcctat ctgctgggct ggttcttcga gttggcaatg agccgacaat
     9841 cgggtatgag cttaaaccca attagctaca ctgaaattga tgcgtggagc aggctttttg
     9901 ctcgtcatct cgaacaatgg gagatcagcg taattaagca gcttgatatg atttacttga
     9961 acgtacaaca aacggagtag tatggatact ttcaactttc agcccaattg ggggcttaac
    10021 gtacagagaa agccagaagt gatgaaaatc gcctttggtg acggttacga acaagtcgcc
    10081 cctaaagggt taaaccataa tctccgcact tattccgctg ttttcaccgg cacagaagca
    10141 cggattaaac agattgaggc attttttgaa cgacaaggcg gctataaggc ttttctttgg
    10201 acaccttacg gcgggaaaga ggggaaattc cgctgtgaag agtgggaggt aagcataagc
    10261 agcgggaaat ggacgctgtc ggcgacgata agagaagtgt tgtagttttt tctgattttg
    10321 tgaactggtt cacactctgt gggttggata taggttagaa tttaagtcta atttgcttaa
    10381 cggagtcttt tatgaaaaaa atttttgttt cagccttatt gctcacttgc tcgttatctg
    10441 cacttggaaa ttcctcgtat gagttgatta ttgactcaat gcaagatctt gaaaagcata
    10501 aacccgaaat tctatctata ccagaagcgg atagaaatac ttttattcgt tatatgatgc
    10561 gaaaagaact gcggataaag ttaaatcaag gcagattagc ggatggtcta actgtgagag
    10621 aagctattca aaatcaacag gcatttgaaa aagatagaaa tagcaaaatg cagcaggaga
    10681 agcaaaaaaa agaaacagag aaagcagaaa aagaaaaagc tgttacggat tttaaccaaa
    10741 aatttgagct atccattaca ggggcgagaa aggcaaaaaa tgcactaaat caagatattt
    10801 tgcttgtttc attaagtcta aaaaataact cagataagcc aattatcgct gtacaaccgg
    10861 atattcaatt tgtactgggt gaagataaac aaactatttc atccatgcgt ccaaaaaaat
    10921 ttgaaaacgg cattccgcct aatggctcag agatttttga gtttgggttt gatttagatg
    10981 atatgtttgc tttgaaagca gaaaaaaata tagagaaatt gagggcagtc ttccaaacag
    11041 cagaagttct ttttgctgat ggaacaactg aaaaacttca atagtaattg gtaaatcttc
    11101 attggccgct tgtagaaata caggcggttt ttttattgga gcaagctatg gcagatttag
    11161 caacactggc gattaaaatc gaaacagaag gcgcaagccg agcaagtgca gatctaagta
    11221 aggtcgagca atctgcaaag aacacagaga aagccgcaga taatctgacg cgcgcaatgg
    11281 gaaatttgaa gcggatttta gcgattgcag ggctggctgg tgggttatcc gcttacctag
    11341 atatggctga aagaatgcag tcgttaaacg cacagcttaa atttgttact aactctcaat
    11401 acgaattcaa tagcgcacaa aaagagcttt ttgcgattgc gcagaatacg cgcgctagtt
    11461 tggaaagcac cacgcaactt tatattaaat cttctcaggc actgaaagat tacggctacg
    11521 cgcaaaagga tattctcaca tttaccgaaa ccattaacaa agcaatggca gttggcgggg
    11581 ttaagccaca agagcaagct agtgctttac tccaattatc acaggcatta ggttcaggga
    11641 aactgcaagg agatgaattc cgttcaattt cagaagctgc accgattatt ttagatacgc
    11701 ttgccgagta tatgggtaaa agtcgcgatg aagtaagaaa actcgcatcc gagggtaagc
    11761 tcaccgcaga cttactgttc aatgcgttta acggttcaag cgctaaaatt accgaaaaat
    11821 ttaatcaaat gccgctaaca tttggcggtg caatgcagca gttgcagaat gccacattga
    11881 aatttatcgg tgacctagat agtgcaaatg gcttgagtgg aatgttagct caagccatta
    11941 gttttttagc acagaatttt gatgtgttag gcaaggcttt gatttatgca accggtgctt
    12001 atattgcgtt taatgcagtt gcctttgctc agaattttgc aaaagcaacc ggtggtgtcg
    12061 gtttattaag tagtgcattt ggttatttga ctacgatgat ccgaggtgca actgttgcaa
    12121 tgatggctaa tcctatcgag cttttaacaa ctgcaattat tggggctgct tttgtatttg
    12181 atgcttttat cagtgatata gaggtaggtg cagcaacctt tgatgcgact tggggagatg
    12241 ttgcgacagc tgtgtgggat gattttaaag atttaacttc agatgcggca gattggttag
    12301 tcactcaatg ggataaagca accgccagtg cagcgagttc gttcagttcc ttaggtgttg
    12361 atattggctc agtatgggag acggtgcaat ccattacgaa aacattgatc aatagtatta
    12421 ttggtctgtt tgttggagct tatcaagcca tcgtgcttgc ttggaataat tttcctgcca
    12481 caatggaaaa cttgggtgtg atggcggtaa atgctcttgt cgatttggtt caaaaaggca
    12541 tcaatagcat tattcagctt atcaaattac cgattgagct tttaaacaga gcctcatcta
    12601 cttttggtgg aggaaatctg attgatacat caggttggaa ggcaagctta gatgatttta
    12661 aactaaaggc aagccgcgag gcagaagttg ttggtcaatc aattagccaa gcatttgcgg
    12721 atagtatcac cacagattac ataggcaatg cagttaattc agtgagtgac tatattgatg
    12781 gagcggcagt tcgtgggcgc ttaaaacgtc aattagatga aaccgcctct gacgatcaag
    12841 gtacgcagtc accagctaaa aaaacattag ctggaaataa taactctgct agtgactgga
    12901 aaaactacct caatgaactt gaacgagcca atgccgatgg attagcccgt attgcacttg
    12961 agcaagatcg ctcaatgcgt gaaatgttgg aaaaggcgaa gaaagccggt gcaagtcacg
    13021 ctgaaattga aaaagccaaa atgctgatta cagaacgtta tgctaaagag cgaatggaaa
    13081 ttgccgagaa gtatgtgccg agtctgaagt ttgaggaaga actcaaagat cagattaagg
    13141 aaattgatga actgcaaaag ttaaacctga ttaccaccga gcaagcaggt cttgcgaaag
    13201 aggcgttagc aggcaaatat cagccggtag ttgaaatcca acagcaatac atcaatcaac
    13261 tgagagagat tgaagcatta aaacaagccg gtgtattaag caaacctcaa gcagaagtag
    13321 cggccgaaaa agccaaatgg gacgccggca cacaaaaagc caaaatcgca ggtaaaaacg
    13381 ccgttagccc ttatgaaaaa tggaaatcgg aatttgaccc aatgcaggca attcaaaatg
    13441 agcaagcctc aaagttggca gaagtgcaat cgatgtacga tcagcatttg atccaatatg
    13501 aggattttat caacgctaaa gcacaaattg atgctaaggc gactgctgat actcatcaac
    13561 tgtttatgaa cagtattagt gggtttggtt cggcgataga tacgatgtta ggcgtgatga
    13621 aaaacgcagg gcaagagcaa tcaggtattt accgcacgat gtttgcgatg tcgaaagcgt
    13681 ttgctattgc ggaatcaatt ctgaacttga atcgtgcaat tactcaagca atgagcgatc
    13741 aaacagctat tacaccggct caaaaatttg caaatatggc ggctattgct agtgccgggg
    13801 cgagcttgat ttctaatatc cagtcagtct cattaggcgg tatggctcac agcggtattg
    13861 acaatgtgcc gaaagaaggc acttggttgc tggataaagg tgagcgtgta gtggatagtc
    13921 gtactaacca agacttaaaa acctttttat ccaatgctaa tcgtggcggt gcaagtggtc
    13981 aaagatcggc gataaatgtc aaaattatta ataacgggca acccgtagag gcgaaagtca
    14041 gcagtgaaga gactgtagat ggcaatatcc aaatgacggt ggaactgctg aagaaaatgg
    14101 atcaaatcgc cgatcaacgc taccgtagaa atcagttaaa tgatttaaga acaggtggaa
    14161 cattatctaa ataggtgaag tatgccaatt agtatttcta accaaatgaa actagatctt
    14221 gccaaacttg agcaaaatgc aatgctggac ttgtacgagg ttgatttgcg caatctcaaa
    14281 gataaaagtg gtaatgctgg cagagtttac cgcttttatt ctgggctaaa tgaactcaaa
    14341 acaagtatcg tctggcaagg gcggacttac gatccgtatc ctattgaggc aagtggattt
    14401 gaacgaaaca gtagcggccc gagcaatcgc ccgactctca cgctatcaaa tctgtttggc
    14461 ttagttacgg gtattgctaa tcagtttgac gaatgtatcg gtgcgattgt ccgccggcat
    14521 caggtttatg ctcaatattt agatgccgtg aattttgccg ggggtaatgc gaaagctgat
    14581 cc
//
LOCUS       DANLTI010000068        14441 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.068, whole genome shotgun sequence.
ACCESSION   DANLTI010000068 DANLTI010000000
VERSION     DANLTI010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14441
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.068"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            1..170
                     /locus_tag="PXB09_001579"
                     /pseudo
     CDS             1..170
                     /locus_tag="PXB09_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            422..1612
                     /locus_tag="PXB09_001580"
     CDS             422..1612
                     /locus_tag="PXB09_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDL5233689.1"
                     /translation="MSTSQQLIQQTEHFGANNYLPLPIVISKAKGIWVEDPEGNRYLD
                     MLSAYSAVNQGHCHPKIVQALKDQADKVTLTSRAFYNDQLGIWYEKICKLANKEMALP
                     MNTGAEAVETAIKTARRWGYDVKGIAENQAEIIACVGNFHGRTMAAVSLSSDPDYKRG
                     FGPMLGGIKLVPYGDLEALKAAITPNTAAFLVEPIQGESGILIPPEGFLEQAYELCKE
                     NNVLFIADEIQAGLGRTGKLFATEWEGFEPDIYILGKALGGGVFPISCVLANRDILGV
                     FNPGSHGSTFGGNPLACAVSIASIDVLLEEKLAERSRELGEYFLAELKKIQNPIIKEV
                     RGRGLFIGLELHQPARPFCEKLKEKGLLCKETHDTVIRFAPPLVIEKFNLDWALEKIR
                     EVLA"
     gene            1687..3198
                     /gene="nhaC"
                     /locus_tag="PXB09_001581"
     CDS             1687..3198
                     /gene="nhaC"
                     /locus_tag="PXB09_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5233690.1"
                     /translation="MLILQTFSKNQPLVKGGFMSNRTEITDQNIRIPFRYAILPVIIM
                     VSIMAVAIIKFEASPHVPLLIGAISAAVIAMAHGYRWETIEKGIYRGIRMALPAIVII
                     IMIGLTIGAWLGGGIVATMIYYGLKLISPSLFLVTISIICAIVTLAIGSSWSTMGTIG
                     VAAMGIGFSLGIPAPMVAGAVISGAYFGDKMSPLSDTTNLAAGITETNLFEHIRHMFI
                     TTVPAFLIALSVYFYFGMEFRAENLDLAKIEDIMQAMQEHFLISPWLLLVPLLVVVLV
                     AKKVPALPALAAGIILGWLCHVFVQGGDVSVAVITLHDGYKIESGHEMIDKLFNRGGI
                     ESMMYTISLTIVAMTFGGIAEQAGMLHSVVEKILTLAKSAGSLISATIVSAFITNVTT
                     SEQYISILLPGRMYIKAYRDKGLSSRNLSRALEDGGTVTSVLVPWNTCGVYAFSMLQV
                     SAFEYAPYAIMNWLIPLIAIGLATLNIKIERLPPEELAKEPEEITLPKRGCCP"
     gene            3315..6914
                     /gene="putA"
                     /locus_tag="PXB09_001582"
     CDS             3315..6914
                     /gene="putA"
                     /locus_tag="PXB09_001582"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDL5233691.1"
                     /translation="MMSYQLLPNTTIRPELSRHYRFDEQTLVQNLIEQAHCDEQADNI
                     KKLTTQLVGKVRTARQKASGVDALMHEFSLSSQEGVALMCLAEALLRIPDTATADKLI
                     RDKIAKGDWRSHTGNSPSLFVNAAAWGLVITGKLVSTHSESSLSSALSRLIAKGGEPL
                     IRKGVDVAMRMLGKKFVTGETIQQAIKNGEKRFAMGYRYSYDMLGEAALTAEDAKRYY
                     NDYVASIHAVGATSKGLGVYKSSGVSVKLSAIHPRYSLSQHQRVMDELYPRLKELFLL
                     AKKYDIGLNIDAEEADRLELSLDLMDRLLADPDLAGFNGIGFVVQAYQKRCPYVIEHL
                     IETARKHNRQLMIRLVKGAYWDTEIKRAQMDGAEGYPVFSRKVHTDLNYIVCAKKLLA
                     AQDVIYPQFATHNAQTLATIYHLAQGKRFEFQCLHGMGESLYDQVVGSDNLNVQCRIY
                     APVGTYQTLLAYLVRRLLENGANSSFVSQIVDENLSVDDLAQAPVQKAELTNGTMHPK
                     IPLPVDLFDDNRVNSKGYDLTDAVSLQNLENALNELTKQHYRAEPQLANDNTSGQESR
                     KIYNPANQAELVGEVIDATENDMEQAFESAAAFQSEWANTSPAVRAECLEKMADLMEA
                     NMPQLFDLAVREAGKTLNNAIAEVREAVDFCRYYAKEVRNNIEAYKNPRGIVVAISPW
                     NFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAHYAVSLFYQAGVPKAALQCLPGRGK
                     TVGVALVADHRVNGVIFTGSTETAKNINRNLHKNEKIIPLIAETGGQNAMIVDSSALG
                     EQVVIDVLNSAFDSAGQRCSALRVLYLQRDVADHILTMLKGAMAELKVGLPQHLTTDV
                     GPVIDKVAQQRLLDHIENLKKSAKSYYQVAISSEIAENGIFVPPTLLEIDHISQLKHE
                     VFGPVLHVIRFDADKLDQVIADINSTGFGLTSGLHSRIDETVDLWLKSVHAGNLYVNR
                     NTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRQEWTLNGLQGNAQAVDFDLNFA
                     IRKVLSGAEQQTALDLAKSLARRSPLGKTYPMQGITGEKNEMIFVARPQIGISKGNLA
                     SQVQALIAIVTVGSQAVAEKSSELAKHASAFGKKLQVVDDFNSLDHLSTLIVLDLLSS
                     EEKLHHAERKGAILTYIEGLDLALSLLPLVHEKAISINTAAAGGNASLMSEMD"
     gene            7023..7673
                     /locus_tag="PXB09_001583"
     CDS             7023..7673
                     /locus_tag="PXB09_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha3 family transposase"
                     /protein_id="HDL5233692.1"
                     /translation="MRKSRLSQYKQHKLIELFVAGVIARTAAELVNVNKTTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEIDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQSATLLPIIREKVKPDSLVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(7674..8561)
                     /locus_tag="PXB09_001584"
     CDS             complement(7674..8561)
                     /locus_tag="PXB09_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide transport protein"
                     /protein_id="HDL5233693.1"
                     /translation="MNKLTQLALISLAFTGSAFAAPKSFTYCLESSPAALNPQIATDG
                     ATLDVGQAIYNRLIDFEKGTTNLTPSLAERWEISEGGKIYTFFLRQNVQFQSNKSFTP
                     SRYFNADDVIFSINRQFDKTNPYHKLSGGNYEFFYGMNMQNIIKNVTKVDDYTVKIEL
                     SEPNAPFLANLAMDFMAIFSAEYANKMQIAGTPEKLDLEPIGTGAFQFYGYQKDAAVR
                     FTAFEHYWEGKAKIDRLVFSITPDASVRLAKLEKNECQAMPYPNPSDLSALKANKDIQ
                     LFEKSGLNIGYITFRGCPR"
     misc_feature    complement(8587..8732)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXB09_001585"
     CDS             complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXB09_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDL5233694.1"
                     /translation="MSALQQNRTLDFFKQNAIYFVLLILLIVIIVQDPSFLSLRNFSN
                     ILSQSSVRLIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMENMNKVFPNLSE
                     IPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLYYDAVGSSP
                     IAGFSDDFSTFAQGFFRFGDFRLSYITIYAVIATIIMWTLWNKTRFGKNVFAIGGNPE
                     AARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIAACVVGG
                     VSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAIDSLKYAK
                     KK"
     gene            complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXB09_001586"
     CDS             complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXB09_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDL5233695.1"
                     /translation="MTGEVLLTMTNVSKSFPGVKALDNANLTVKSHSVHALMGENGAG
                     KSTLLKCLFGIYAKDEGDILFLGKPVNFKTSKEALENGISMVHQELNLVKQVTVMDNL
                     WLGRYPLKGPFVDHDKMYRDTKAIFDELDIDVDPRDKVAKLSVSQMQMIEIAKAFSYN
                     AKIVIMDEPTSSLSEKEVEHLFKIIQKLKDRGCGIIYISHKMDEIFKICDEITILRDG
                     KWVNTVAIKDTSMDQVVSMMVGRELTQRFPEKTNLPKEVILEVEHLTAKNQPSIQDVS
                     FSLRRGEILGIAGLVGAKRTDIVETIFGVREKAGGTIRLNDKEINNRNAFDAINNGFA
                     LVTEERRSTGIYANLSIEFNSLISNMKSYLGKFGLLSNKKMKSDTQWVIDSMNVKTPS
                     HQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDIGAKFEIYQLILELANKDK
                     GIIMISSEMPELLGVTDRILVMSNGKVAGIVETAHTSQEEILQLAAKYL"
     gene            complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXB09_001587"
     CDS             complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXB09_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5233696.1"
                     /translation="MKKAVLSAVAMAVALGATISTAQAENRIGVTIYKYDDNFMALMR
                     KEIEKEGKTQKVELLMNDSQNTQSIQNDQVDVLLSKGVKALAINLVDPSAYKTIIQKA
                     KSEDVPVVFFNKDPGAAAIDSYPKAYYVGTEPKESGIIQGELIAKQWKAHPELDLNKD
                     GKIQFALLKGEPGHPDAEARTKYVVESLKAQGIDSEQIFMDAALWDAAQAKDKVDAWL
                     SSGKAKDIEVIISNNDGMALGALEATKAHGRKLPIFGVDALPEALQLIKKGELAGTVL
                     NDGVNQGKAVVQLSANLADGKDAVAGTQWKLENRVVRIPYVGVDKDNLSEFLK"
     gene            complement(12782..13918)
                     /locus_tag="PXB09_001588"
     CDS             complement(12782..13918)
                     /locus_tag="PXB09_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5233697.1"
                     /translation="MLLRKAFKFEIRPNGEQVRKMKQFCGCSRFVFNKALAWQNEQYE
                     QDNHHKFSYTKLANLLPQWKKELVWLKDCHSQVLQQSLKDLESAFKNFFQKRADLPKF
                     KKKGVKESFRFPQGCKIEQKNDRLYLPKIGWVRYRNSREIVGEVKNVTVSMKCGRFFV
                     SIQTEFKQEIPTHKGGEIGIDMGIARFATLSNGEFFEPLNAFKTHKGKLAKLQKQLKN
                     KVKFSKNWQKLKDKIGKLHHKIANCRKDFLHKISTQISKNHAMIYVEDLQVANMSKSA
                     KGTAEVHGKNVKQKSGLNRVILDQSWFEFRRQLDYKTQWLGGFLLAVPPQNTSRTCPC
                     CNYTAKENRQTQENFECVECGYTENADVVGAMNVLTRGQAIVQA"
     gene            13965..14381
                     /gene="tnpA"
                     /locus_tag="PXB09_001589"
     CDS             13965..14381
                     /gene="tnpA"
                     /locus_tag="PXB09_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDL5233698.1"
                     /translation="MKKETEIRRGRHVVFNLHVHLVFVTKYRREVFTQAILNDLHSIF
                     ATICADFEATLVEFDGEDDHVHLLVEYPPKVAISHLVNSLKGVSSRMIRKKNYPSIRK
                     KLWGNQLWSPSYFAGSCGGAPISIIRQYIEQQQTPD"
BASE COUNT         4113 a         3019 c         3045 g         4264 t
ORIGIN      
        1 gaattgagaa tttttggagc caagcaaaac gccatttgcg taaatttaac ggcataccta
       61 aagctcattt tgagctgtat ttgaaggaat gcgaatagcg ttttaatcac agtgacttaa
      121 aatctcaaat ttccatttta aaacaattgg ttaggggttg tttaagttag ttatctagga
      181 cagccctaaa ttttgtagtt ggaatttcaa cggagaaagt tatctataaa cttacaaaag
      241 ttatagaaaa tggaggcatt tttgcttaaa gtatgctatc tattcatatt aattgcatag
      301 ttaatcaaca actgaagaaa aattagaagt agatcataaa atcaacaaaa agtccgtgct
      361 ttttagctaa agattgttaa actcttttgt gttacaagtt tttaacataa aggagttttt
      421 tatgtctact tctcaacaac tcatccaaca aaccgaacat ttcggtgcca ataactacct
      481 acctctacct attgttatta gtaaagctaa aggcatttgg gttgaagatc ctgagggtaa
      541 tcgctatttg gatatgctta gtgcctactc agcggttaat caagggcatt gtcatccaaa
      601 aattgtacag gcactaaaag atcaagcaga caaagtaacg ctgacctctc gagcatttta
      661 taacgatcaa cttggtattt ggtatgaaaa aatctgcaaa ctcgctaata aagagatggc
      721 attaccgatg aatacgggtg cagaagcggt agaaacagcg attaaaactg ctcgccgttg
      781 gggttatgat gtgaaaggaa ttgcagaaaa tcaagcagaa atcatcgctt gtgttggcaa
      841 ttttcacgga cgaacaatgg ctgcagtatc tctctcgtct gatccggatt ataaacgtgg
      901 tttcgggccg atgttaggtg gcatcaaact tgttccatac ggtgatttag aagcattaaa
      961 agctgcgatt acaccaaaca cagcagcgtt tttggttgag ccaatccaag gtgaatctgg
     1021 cattcttatt ccacctgaag gtttcttgga acaggcttat gaactatgca aagagaataa
     1081 tgtgctgttt attgctgatg aaattcaggc aggtcttggg cgtactggca agttatttgc
     1141 aacagaatgg gaaggctttg agccagatat ttatattcta ggtaaagcac ttggtggcgg
     1201 ggtgttccca atctcttgtg tgttagcaaa tcgtgatatt ttaggcgtat tcaatcctgg
     1261 ctcgcacggt tcgacatttg gtggtaatcc attagcctgt gcggtatcta ttgcctcaat
     1321 tgatgtactg ttggaagaaa aacttgcaga gcgttcccgt gagttaggtg aatacttctt
     1381 ggcagagctg aaaaaaatcc aaaatccaat tattaaagaa gttcgtggac gtggactgtt
     1441 tattggcttg gagttacatc aaccagcacg cccattctgc gaaaaactca aagaaaaagg
     1501 cttactctgc aaagagaccc acgatacagt tatccgcttt gctccccctt tggtgattga
     1561 aaaattcaat ttggattggg cattggagaa aattcgggag gtgttggctt aattgtcatt
     1621 ttctctatat tttatcctgc caaatcgcct ttaacccttt ttggcaggaa gcaaaacagt
     1681 tgtaaaatgc tgattttgca aactttttcc aaaaatcaac cgcttgtaaa aggtggcttt
     1741 atgtcaaaca gaacagaaat aacagaccaa aatatccgaa tcccgtttcg ctatgctata
     1801 ttgcctgtga ttattatggt atcgattatg gcggtggcta tcatcaaatt tgaagcctca
     1861 cctcacgttc cgttgcttat tggggcaatt agtgccgctg tgattgcaat ggcacatggc
     1921 taccgttggg agacaattga aaaaggaatt tatagaggca ttcgtatggc tttaccagcg
     1981 attgttatca ttattatgat tgggctaacc atcggagctt ggctaggtgg tggaattgta
     2041 gctacgatga tttactacgg cttgaaattg atctctccgt cgctgttttt agtaactatc
     2101 tcaataattt gtgctattgt gacccttgcg attggtagct cgtggtctac aatgggaaca
     2161 atcggtgtag cggcgatggg gatcgggttt agtctcggca ttccggcacc gatggttgcc
     2221 ggtgcggtga tctcaggagc atatttcggc gataaaatgt cgccactgtc agacactacc
     2281 aatctggcag cagggattac cgaaaccaat ctgtttgaac atatccgcca tatgtttatc
     2341 actaccgtgc cggcgttcct gattgcgtta tctgtctatt tctattttgg tatggaattt
     2401 agagccgaaa atctcgatct tgctaaaatt gaagacatta tgcaggcaat gcaggaacat
     2461 ttcttgattt cgccttggtt gctattagtg cctttattag tcgtggtgtt ggtggcaaaa
     2521 aaagtgcctg ccttaccggc attagctgca gggataattc ttggttggct ctgccacgtt
     2581 tttgtgcaag gcggtgatgt cagcgtagca gtgattactc tgcacgacgg ctataaaatt
     2641 gagagcggcc acgagatgat tgataagctg ttcaaccgtg gtgggatcga gtcgatgatg
     2701 tacaccattt cccttacgat tgttgcgatg acttttggtg gcattgcaga gcaagctgga
     2761 atgttacatt cagtagtgga aaaaatcctt acccttgcaa aatcagcagg tagcttaatt
     2821 agtgctacga ttgtatcggc atttattacc aacgtaacga catctgagca atatatttct
     2881 attttattac caggcagaat gtatataaaa gcctataggg ataagggact aagttcgaga
     2941 aacctttctc gtgcattgga agacggagga acagttactt cggttcttgt accttggaat
     3001 acctgtggtg tttatgcgtt ctcaatgttg caagtgagtg cttttgaata tgcaccgtat
     3061 gcaataatga attggctcat tccactgatt gcgattggct tggcaacctt gaatatcaaa
     3121 attgagcgat tgccaccgga agaattagcc aaagaacctg aggaaattac tctgccaaaa
     3181 cgtggttgtt gtccataatt tatctaaata gtatttaata acaataggtt aagttaaata
     3241 acaagcggtc ggttttatct taaaatttgc aagtttatac ataaatttga tcgcttgctg
     3301 tatagaaagg aaaaatgatg tcataccaac ttttacctaa caccactatc cgtcctgaat
     3361 tgagccgtca ttaccgcttt gatgagcaaa ccctggtgca aaatctgata gaacaagcac
     3421 attgtgatga acaggctgat aacattaaaa agctcactac ccaattagtc ggtaaagtcc
     3481 gaactgcacg ccagaaagca agcggggttg atgcgttaat gcacgaattt tcactctcca
     3541 gccaagaggg ggtggcgttg atgtgccttg ccgaagcatt actacgcatt cctgacaccg
     3601 ccactgcgga taaattaatt cgagacaaaa ttgccaaagg ggattggcgt tcacacaccg
     3661 gcaacagccc ctctctgttt gtgaatgcag cggcgtgggg cttggtgatt accggcaaat
     3721 tggtttcaac ccacagcgaa agctcactct catcagcact ttcacgcctg atcgccaaag
     3781 gcggagaacc gctgatccgc aaaggtgtgg acgtagcaat gcgtatgctc ggcaagaaat
     3841 ttgtaacggg cgaaaccatt caacaggcga ttaaaaacgg cgaaaaacgc ttcgcaatgg
     3901 gttatcgtta cagctacgat atgctgggcg aagcggcact caccgccgaa gatgccaaac
     3961 gctattacaa cgactatgtt gcctctattc acgctgtggg tgccacctcg aaaggcttgg
     4021 gcgtgtataa atcctcgggt gtgtcggtca aactctccgc cattcaccct cgttattccc
     4081 tttcccaaca ccaacgtgtg atggacgaac tctatccacg tctgaaagaa ctgttcttgc
     4141 tggcgaaaaa gtatgacatc ggcttgaaca ttgatgccga agaagccgac cgcctcgaat
     4201 tgtcgcttga tttgatggac agactgcttg ccgaccctga tttggcaggg tttaacggca
     4261 ttggttttgt ggtgcaggcg taccaaaaac gttgcccgta tgtgatcgag catttaattg
     4321 agaccgcccg taaacataat cgccagctaa tgattcgctt ggtaaaaggc gcatattggg
     4381 acactgaaat caagcgggcg caaatggacg gtgcagaggg ctatccggtc ttctcccgta
     4441 aggtgcatac cgatttgaac tacatcgttt gtgccaaaaa attgctggcg gcgcaagatg
     4501 tgatctatcc gcaatttgcc acccacaacg ctcaaactct cgccaccatt taccacttgg
     4561 cacagggcaa acgttttgag tttcaatgct tgcacggtat gggagagagc ttgtacgacc
     4621 aagtggttgg cagcgataat cttaacgtgc aatgtcgcat ttatgcccct gtcggtactt
     4681 atcaaaccct gcttgcctat ttagtacgtc gcttgttgga aaacggagcg aacagctcat
     4741 ttgttagcca aattgtggat gaaaatctca gtgtagatga tctggctcaa gcccctgttc
     4801 aaaaagcaga actgaccaat ggcactatgc acccgaaaat tccattgcca gtcgatttat
     4861 ttgacgacaa tcgtgttaat tccaaaggct atgatttaac tgatgcagta agcctacaaa
     4921 atttagaaaa tgccctcaat gaacttacca aacagcatta ccgtgctgaa ccacagctgg
     4981 caaatgataa tacaagcggt caagaaagcc gaaaaattta caatccagcg aaccaagctg
     5041 aattagtcgg cgaagtgatt gatgccaccg aaaacgatat ggaacaggcg tttgaaagtg
     5101 cggcggcgtt ccaaagtgaa tgggcgaata cttcccctgc ggtgcgtgcc gagtgcttag
     5161 aaaaaatggc ggacttgatg gaagccaata tgccacaact gttcgatttg gcggtgcgtg
     5221 aggcaggcaa aacgctcaac aatgcaattg ctgaagtgcg tgaagccgtc gatttctgtc
     5281 gttattatgc caaagaggta cgcaacaaca ttgaagcata caaaaatccg cgtggcattg
     5341 tagtagcaat tagcccgtgg aactttccgt tagcgatttt tgtgggtgaa gtttcatctg
     5401 cgttggtggc aggcaatgtg gtactagcaa aaccagctga acaaacttcg ttaatggcac
     5461 attatgctgt cagccttttc taccaagcag gtgtgccgaa agcggcgttg caatgcttac
     5521 cgggtagagg aaaaacggtt ggggtggcgt tggtggcaga tcatcgtgtg aacggcgtga
     5581 tttttactgg ttcaacagag acagctaaaa acattaaccg caatttgcac aaaaacgaga
     5641 aaattatacc gcttattgcc gaaactggcg gacaaaatgc aatgattgtt gatagctcgg
     5701 cactgggcga gcaggttgtg atagatgttt taaactccgc atttgactca gcagggcaac
     5761 gttgttcggc attgcgtgtg ctgtatctgc aacgtgatgt tgccgatcac attctcacaa
     5821 tgctcaaagg agcaatggcg gagttgaaag ttggtcttcc acaacactta actaccgatg
     5881 tcggaccagt aatcgataaa gtcgcacaac aacgcttgct cgatcatatt gaaaatctca
     5941 aaaaatcggc gaaaagttac tatcaggtgg ctatctcctc tgaaattgcc gaaaatggta
     6001 ttttcgtacc gccaacgctg ttagaaatag atcatatcag ccagcttaaa cacgaagtat
     6061 tcggaccggt gctacacgtt atccgttttg atgcggataa actcgaccaa gtgattgccg
     6121 acataaactc cacaggtttc ggtctaacca gcggtttgca tagccgaatt gatgaaacgg
     6181 tggatttatg gttgaaatct gtccacgctg gaaatctgta tgtaaaccgt aacacggtag
     6241 gggctgtggt cggcgtacag ccattcggtg gaatggggtt atcaggaact gggccgaaag
     6301 ctggcgggcc gctctatcta caacgtttag taaaccgcca agaatggaca ttgaacggtt
     6361 tacagggcaa tgcacaagcg gtcgattttg acttaaattt tgcaatccgc aaggttctaa
     6421 gtggagctga gcagcaaacg gcgttagatc tggccaaaag ccttgcacgc cgctcgccac
     6481 tcggaaaaac ctacccaatg cagggtatta ccggcgagaa aaacgagatg attttcgtgg
     6541 ctcgcccaca gattgggatt agcaaaggta atttggcttc acaggtgcaa gccttgattg
     6601 ccattgtaac ggtcggcagc caagcggtgg cagaaaaatc aagcgagctg gcaaaacacg
     6661 cctctgcctt tggtaagaaa ttacaggtgg tggatgattt caacagtctc gatcacctca
     6721 gcacactcat tgtgcttgac ctgctttcta gtgaggaaaa attgcatcat gccgaacgca
     6781 aaggggcgat tttgacctac atcgaagggc tggatttagc gctctcactg ctgccgttgg
     6841 tacacgagaa agcaatcagc atcaacaccg ctgccgcagg gggaaatgcc agcttaatga
     6901 gtgaaatgga ttaagcaaca aacaaaagag tataagaggg cagatcacaa tgatctgcct
     6961 ttttatttta aggggctgtc ctagataacg actaaaactt ccatttaggt taagataacc
     7021 ctatgagaaa aagtcgtcta agtcagtaca aacaacataa actcatagag ctgtttgtag
     7081 caggcgtaat cgctcgaaca gccgcagagt tagtgaatgt aaataaaacc accgcagcct
     7141 attattttca ccgtttgcga ttgctcatct atcaacatag ccctcatttg gaaatgtttg
     7201 agggagaaat tgagattgat gagagctatt tcggcggtca tcgcaagggt aaacgaggtc
     7261 gtggtgcagc aggcaaaacc gccgtattcg ggcttttaaa gcgtgacggc aaggtttata
     7321 ccgtagtagt gccgaacaca caatctgcta cacttttgcc gattattcgg gaaaaggtga
     7381 agcccgatag ccttgtttac accgattttt atcgaagcta tgatgtgctt gatgtgagtg
     7441 aatttaacca ttttcgtatc aatcacagca cacacttcgc agaaaatcaa aatcacatta
     7501 acggaattga gaatttttgg agtcaagcaa aacgtcattt acgcaagttt aatggtattc
     7561 cgaaagccca ttttgagcta tatttgaaag aatgcgaatg gcgttttaat cacagtgact
     7621 taaaatctca aatattcctt ttaaaacaat tggttaaagg ggggttaggt tagttatcta
     7681 ggacagcccc taaaagtaat ataaccgata tttaggcctg acttttcaaa taattgaata
     7741 tctttattcg cttttaaagc agacaaatct gacgggttcg gataaggcat cgcttggcat
     7801 tcgttcttct ccaatttagc taaacgtact gaggcatcgg gcgtaatact aaatacaagg
     7861 cgatctatct tcgcttttcc ttcccaatag tgttcaaatg ctgtaaatct taccgctgcg
     7921 tccttttggt aaccatagaa ctggaatgca cctgtgccta taggttctaa atctaatttt
     7981 tccggcgtac ccgctatttg cattttattt gcatattccg cagaaaagat cgccataaaa
     8041 tccatagcta aattagcaag aaagggggca ttcggttcag ataattcgat ttttaccgtg
     8101 taatcatcta cttttgttac atttttgatg atgttttgca tattcattcc gtagaaaaac
     8161 tcatagttac cgccggacaa tttgtgatat ggattcgtct tatcaaactg acggttaatc
     8221 gaaaaaataa catcatcagc attaaaataa cgactagggg taaaactttt attactctgg
     8281 aactgcacat tctgacgcaa gaaaaaagta taaatttttc cgccttcact gatttcccat
     8341 cgctctgcca gagaaggagt gaggttagtg gtaccttttt caaaatcaat caggcgatta
     8401 tagattgctt gcccgacatc aagagtagct ccatctgttg caatctgagg attcaatgct
     8461 gccggagatg attccaaaca gtaagtaaaa gatttaggtg ctgcgaaagc agaacctgta
     8521 aatgctaaag aaataagtgc aagttgtgtc agcttgttca ttgtcatatc cttaaatgtt
     8581 aagcaataaa aaaccctttc aaaagttgcc ttccgaaagg gttagaattg ggtttgcgat
     8641 tttggattgc gtttgccatt tcaggttttc ggaagatatc ttccgaacac gccaaatgcc
     8701 cgaaagatta atcggtcaaa tggtagtgat gatgtttaac gcaatagctc ataatattct
     8761 ccaaaattga atgtttagga atttacgctt tttaaaaatc aattgcaaac gttttcttta
     8821 aaattttgta aaaaattcaa catttttcac cgcttgtatc gtacctagga gcaaatggcg
     8881 atttgctcct aggtttccaa gcaataggct attttttctt cgcatattta agtgagtcaa
     8941 tcgctaccgc caagataatg atgccacctt taataatata ttgccagtaa gggtttactc
     9001 caatataggt taagccgtag ttgataacgg tgaagattaa cacccctgtt actacaccga
     9061 tgatagtacc cacaccaccg gcaaaggata ccccacctac cacacaagcg gcaatggcat
     9121 ccatttcata cataaagcct aagttgttgg ttgcactacc gatacgacct gcttctaaca
     9181 taccgccgaa ggcatagaag atgcctgaaa gcatataaat acccatcagg ttaagcggta
     9241 cgtttacacc ggaaactcgt gctgcttcag ggttgccgcc aatagcaaat acgtttttac
     9301 cgaagcgggt tttattccat aacgtccaca taataatggt agcaatcacg gcataaatag
     9361 tgatgtagga tagcctaaag tcgccaaagc ggaagaagcc ttgtgcaaag gttgagaaat
     9421 catcgctaaa gcctgcaatt ggcgatgagc ctactgcatc gtagtaaagc gagttgatac
     9481 catacacaat aatcattgtt cccatcgtgg caataaacgg tgttacgttg aggtaagcca
     9541 ccacaaagcc gttaaataaa ccaatgacag caccgatggc acacacggtt aatacaacca
     9601 caggaatcgg gatttccgag aggtttggga ataccttgtt catattttcc attgattgga
     9661 gcaaggtggc ggaaattacc gctgccaagc ccacttggcg accggcagat aagtctgtcc
     9721 cttgtgttac aatcaagcct gcaaccccta atgcaataat caaacgcaca gaagattgcg
     9781 ataaaatgtt actgaagtta cgcaagctca agaaacttgg gtcttgcaca ataatcacaa
     9841 taagtaagat taataatacg aagtaaatcg cattttgttt aaaaaaatcg agtgttctat
     9901 tttgttgtaa agcagacata cttcactcct tgttataaat attttgctgc gagttgcaag
     9961 atttcttctt gcgaggtgtg agcggtttcg acaatacctg caactttccc gttactcatc
    10021 actaaaattc ggtctgtgac cccaagcaat tccggcattt ccgatgaaat cataatgatg
    10081 cctttatctt tattcgccag ctctaaaatc aactggtaaa tttcaaattt tgccccgata
    10141 tcgataccac gggtcggctc gtcaagcatc aagatttcag gctgggttaa caaccaacgc
    10201 ccgataatca ctttttgttg gttaccgccg gaaagtgagc caatatgcgt ttgatgcgat
    10261 ggggttttta cattcatcga atcaattacc cattgggtat cgcttttcat ttttttattg
    10321 ctcagtaagc cgaacttgcc tagataagac ttcatatttg aaatcagaga gttaaactca
    10381 atgcttaagt tggcataaat ccctgttgaa cggcgttctt ctgtaaccaa tgcaaagccg
    10441 ttattaatcg catcaaaagc gttgcggtta ttgatttctt tatcgtttag tcggatagtg
    10501 ccgcctgctt tctcccgtac accgaaaatg gtttcaacaa tatcagtccg ttttgctcca
    10561 actaagccgg cgatgcctaa aatttcccct ctgcgtaagc taaagctgac atcttgaata
    10621 gagggttgat tttttgccgt taaatgctca acttcaagaa tcacttcttt cggcagattg
    10681 gttttttcag ggaaacgctg ggtcagctca cgccctacca tcattgaaac cacttgatcc
    10741 attgaggtat ctttaattgc aacggtgttt acccatttac cgtcacgcaa aatggtaatt
    10801 tcatcacaaa ttttaaaaat ttcgtccatt ttgtgtgaaa tatagataat gccacagcct
    10861 ctgtctttca gtttttggat aattttaaat aaatgctcga cttctttttc tgaaagtgac
    10921 gaagttggtt cgtccataat cacaattttg gcattgtaag agaaagcttt tgcaatctcg
    10981 atcatctgca tttgtgaaac cgataatttg gctactttat cacgtggatc aacatcaata
    11041 tctaattcat caaaaatcgc cttagtatca cgatacattt tatcgtgatc tacaaaaggc
    11101 ccttttagtg ggtaacgacc tagccataag ttatccatta ccgtcacttg ttttactagg
    11161 ttcaactctt ggtgaaccat tgagatccca ttttctaacg cctcttttga ggtcttaaaa
    11221 ttcaccggct tgccaagaaa gagaatatct ccctcatctt tagcataaat cccaaataag
    11281 catttcagta acgttgattt acctgctcca ttctctccca ttaaggcgtg aacactatgg
    11341 gatttcaccg ttaagttagc attatctaag gcttttaccc cgggaaatga cttgctaaca
    11401 tttgtcattg tgagtaaaac ttcacctgtc atatctcacc cctgattaca tcgaaaaatc
    11461 gaaaaaaagc acgggtatcc atcacccgtg ctaaaagcgt gaattatttt aaaaattcag
    11521 ataagttgtc tttatcgaca ccaacgtaag gaatacgcac cacacggttt tccaatttcc
    11581 attgtgtacc agcaactgca tctttaccgt ctgctaagtt agcagaaagc tgaacaaccg
    11641 ctttaccttg gtttacacca tcatttaata ccgtaccggc taattcacct tttttgatta
    11701 attgaagtgc ttctggcaat gcatctacac cgaagattgg taattttcta ccgtgagctt
    11761 tggttgcttc taatgcacct aacgccatac catcattatt agaaataatt acttcgatgt
    11821 ctttcgcttt accacttgat aaccaagcat ccactttatc tttagcttgg gctgcatccc
    11881 ataatgctgc gtccataaag atttgctcac tgtcgatacc ttgtgctttt aagctttcta
    11941 ccacatattt agtacgtgct tccgcatcag ggtgacccgg ctcacctttt aataaggcaa
    12001 attggatttt accgtcttta ttcaagtcta attcaggatg ggctttccac tgttttgcaa
    12061 ttaactcacc ttgaataatg cctgactctt tcggctcagt acctacataa taagctttcg
    12121 gatagctatc aatcgcagct gcacccgggt ctttattgaa gaacaccaca ggcacatctt
    12181 cactttttgc tttttgaata attgttttat aagctgatgg atccactaag ttaattgcta
    12241 atgctttaac ccctttagaa agtaatacat caacttggtc gttttgaata gattgcgtat
    12301 tttgcgagtc attcattaat aactcgactt tttgtgtttt accctctttt tcgatttctt
    12361 tacgcattaa tgccataaag ttatcgtcat atttataaat tgttacacca atacggtttt
    12421 cagcttgagc tgtactgatc gttgcaccta atgcgactgc cattgccact gcacttaata
    12481 ctgctttctt catagtagat cacctctttt atgtgtttat agggaaatga attgcttacc
    12541 ataagcaact tggtgcaaag tataactaat tttaaaaaaa caatccgtga tcattctcac
    12601 agaattaaga caaagtggag aaatttttaa ttttaagttt gacatcctcc cctgcctaaa
    12661 ggcaggggat tcctactagc tcccacagca agctgtgggc tactctcggt gggtttctac
    12721 tgctgatctc tattgagatt cacttcatag acgcttcggg tatgtcctac cctgatattt
    12781 attatgcttg gactattgct tgcccacgtg taagaacatt cattgctccc actacatcgg
    12841 cattttccgt atagccacat tctacgcatt caaaattttc ctgtgtttgg cgattttctt
    12901 ttgctgtata gttgcaacaa gggcaagtac gactggtatt ttgtggagga actgctagca
    12961 aaaatccgcc taaccattgc gttttgtagt ccagttgtcg tctaaattca aaccaagact
    13021 ggtctaatat cactcggttt aagcctgatt tctgtttcac atttttgccg tgtacttccg
    13081 ctgtgccttt ggctgatttg gacatattcg ccacttgcaa atcttcaaca tagatcatcg
    13141 cgtggttttt gctgatttgc gttgagattt tatgcaggaa atcttttcgg cagttggcga
    13201 ttttgtgatg taacttgccg attttatctt tcagtttttg ccagttttta ctgaacttca
    13261 ctttattttt tagctgtttt tgcagttttg ccaattttcc tttgtgggtt ttaaacgcat
    13321 ttaacggctc aaaaaattct ccattggaaa gggttgcaaa acgagcaatg cccatatcaa
    13381 tgccgatttc tccgccttta tgcgtgggaa tttcctgttt aaattccgtt tgaatgctca
    13441 caaaaaagcg tccgcatttc attgaaacgg tgacattttt tacttcccca acaatttcac
    13501 gactgttgcg ataacgcacc caaccgattt tcggcagata caagcggtcg tttttctgct
    13561 cgattttgca accttgcgga aaacggaaac tctcttttac gccttttttc ttgaatttgg
    13621 gcaaatccgc acgcttttga aagaagtttt taaacgcact ttcaaggtct tttaacgact
    13681 gttgaagcac ttgtgaatgg caatctttaa gccataccaa ttcttttttc cattgcggaa
    13741 gcaagttggc gagcttggta taactgaatt tgtgatggtt atcttgttcg tactgctcat
    13801 tttgccacgc caatgccttg ttaaacacaa agcgagaaca gccgcaaaac tgcttcattt
    13861 tgcgaacttg ttccccattt ggtctgattt caaatttaaa ggctttacgt agtaacattg
    13921 cacgaattag aatacaaaaa ttgtgcttat tctacacttg gcctatgaaa aaagaaacag
    13981 agattagacg tggtcgccac gttgttttta acttacacgt tcatttagtt ttcgtgacta
    14041 aatatcgcag ggaagttttt actcaagcaa ttttgaacga cttacactca atttttgcaa
    14101 cgatttgtgc tgattttgaa gccacattag tggaatttga tggtgaagat gatcacgttc
    14161 atctacttgt ggaatatccg cctaaagtcg ctatttctca tcttgtaaac agtttaaaag
    14221 gcgtttcgag ccgaatgatt agaaagaaaa actatccgag cattcgcaaa aaattatggg
    14281 gaaatcaact ttggtcaccg tcttactttg ctggtagttg tggtggtgca ccaatatcga
    14341 ttattcgcca atatatcgag caacaacaaa cacctgatta gttagaaatt tgaaacggct
    14401 ttgccgttta taccttatat ccacgcccta aaggacgtgg t
//
LOCUS       DANLTI010000069        14359 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.069, whole genome shotgun sequence.
ACCESSION   DANLTI010000069 DANLTI010000000
VERSION     DANLTI010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14359
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.069"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            14..3172
                     /locus_tag="PXB09_001590"
     CDS             14..3172
                     /locus_tag="PXB09_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDL5233699.1"
                     /translation="MITINENTIEQSAIATLQSLGWDYTYGKKILAGLEHEWRERTAE
                     VILKPLLAQAIAKFNPNLPACEVENVVAQVCRADSGDLAERNRQAYDWLRNGVKITYQ
                     LYGEQVSDVVQLIDFQRPENNDFRIVNQLDISGKKGKRIPDLIGFVNGLPLVVFELKN
                     PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDGIVARIGSLTADFDRFTPWRVV
                     DEKNQSKRIVFEDELTALLQGVMTPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYG
                     VNEAVDCTLLAATGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQSSLKNPTLVLVTDRN
                     DLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELA
                     HPVLNERENIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTP
                     IELDDKDTQEVFGKYVSIYDFEDAVEDGATVPIIYEPRQISLGESGEFSKVMEEAQQL
                     IDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSRAICVKL
                     YEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNI
                     VIVRDMWLTGFDAPCCNTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGL
                     TDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVIHGQFATPIDGQAVDIAKMLQ
                     ISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGAL
                     KAVEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFD
                     LLKKDRPNINLLSDEFLETVKNSPTKDLWLSAMERYLASQLREQSGANLATKKAFEQK
                     LKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEMAFYDALARNESA
                     VREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAE
                     AIEFVLQQAEEIAGEFAITETA"
     gene            complement(3206..6097)
                     /gene="glnE"
                     /locus_tag="PXB09_001591"
     CDS             complement(3206..6097)
                     /gene="glnE"
                     /locus_tag="PXB09_001591"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDL5233700.1"
                     /translation="MLTTLIPLSQLNLPPNLQNSEQIQPLVTAISLSNFVHQTLQKQP
                     DLLAEWLAKFPTPDDCCNYTERLAKILARVENEEMLGRVLRQFRHRELARLSFIQSNK
                     LATVELVFQHLSDLAESLILAARDWLFQRCCAEYGTPKNTLGETQELLILGMGKLGGR
                     ELNFSSDIDLIFTYPDIGETEGGRKSIENSKFFTRMGQRLIKVLDEITADGFVYRTDM
                     RLRPFGDSGALVLSFTAMEDYYQEQGRDWERYAMIKAKILGEDSQNLNHRYLKQMLRP
                     FVYRRYLDFSAIQSLREMKEKISREVVRRNLTDNIKFGAGGIREVEFIAQTFQMIRGG
                     RDKILQERSLLKVLPRLAELNLLTQTQVETLHNAYIFYRQIENVLQAIDDKQTQTLPT
                     DEASQARLVFACQSYYQQDLYSEKTHWVEHSFNDWQQFMAVLSQYQQAVRQIFNEIIG
                     EEETQANCNPVNEKLAEWKDILHYNIRLEDLSAVLKGYPKVAENDYTEIFRHFSTTFQ
                     DWVKRPIGVRGREVLRNLMPRIADSIFKGEDHLLLLPRVLNIVDKITTRTTYLELMLE
                     KEQILPQLLALCSKSVMIAEQIARYPMLLDELMSHRGLTDVQAFEKYQSALQDYLIRI
                     PEEDEEALIDGLRQFKQTQILRIAAADILGVLLVMKISDHLTYLAEAIINAVVNMAWK
                     QVSQRFGVPEHLEADEKGFAVIGYGKLGGIELGYNSDLDLVFLHNAPEDSQTVGGKKE
                     ISSHQFYLKLAQKINSIFNLNTSAGVLYEVDMRLRPSGEAGLLVSTFNAYEHYQKNEA
                     WTWESQALVRTRCVFGAENLKQAFEKIRQSTLAQPRASGQLRQEICEMRQKMYQHLSS
                     HSAEQFHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSE
                     QSEQLQHCYTALRNKIHHLNLLRKDSVVDASEFTTERAFVREMWQRLLA"
     gene            complement(6269..6550)
                     /locus_tag="PXB09_001592"
     CDS             complement(6269..6550)
                     /locus_tag="PXB09_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDL5233701.1"
                     /translation="MYYVIFAQDNPNMLEKRLEVRPAHLARLEKLQAEGRLLIAGPNP
                     TEDGSSVTGSTVIAEFNSLEEAQQWASQDPYVEAGVYSDVIIKPFKRVF"
     gene            complement(6552..7016)
                     /gene="yciA"
                     /locus_tag="PXB09_001593"
     CDS             complement(6552..7016)
                     /gene="yciA"
                     /locus_tag="PXB09_001593"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDL5233702.1"
                     /translation="MKDKPYGKAPEGKLILRTLAMPSDTNANGDIFGGWIMSQMDLGG
                     AILAKELAKGRVVTVTVDKMIFHRPISVGDVVCCYGKLMHIGRSSMQVKVEVFIKQVY
                     EGNRERYLVTEALFTYVAIDKEGKPRAVPRENNPELDEALSLIDLTPEKQGE"
     gene            complement(7006..7563)
                     /locus_tag="PXB09_001594"
     CDS             complement(7006..7563)
                     /locus_tag="PXB09_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDL5233703.1"
                     /translation="MKQLLEFIPLILFFVVYKMSGIQMASIALVIATIVQMIALKMLY
                     GKIEKQQIIMGGSVVFFGLLSAYFNEVKYLQWKVTIVYALFALVLLVSQFVFKTPLIK
                     KLLGKEIQLPEAVWNKINFGWAVFFLICMLLNIYISQYLSEEIWVDFKSFGIIGLTLV
                     ATVITGFVLYPYLKDAEKQEQKNER"
     gene            complement(7572..8381)
                     /locus_tag="PXB09_001595"
     CDS             complement(7572..8381)
                     /locus_tag="PXB09_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233704.1"
                     /translation="MAQALLYFTTKYLQSIEGYFMSIKFVDLLQQSWNFMRNQQAFSL
                     FAIVTIVVVQLVFILVSPNSPELMAESQPQQLQIDASKMVSILLPTILLGVVNLLINV
                     LMIFNIQSINDGNYRQFFQNAGNALKHFLPVLLLQFVMVLPLSLGASFAMASPETVII
                     ALPVLVVGFYFFIKLSLVIYAYLLEKPQKSLSESIKFTLQLSRGKMLPLILFCVISYL
                     LPGMLSRLFTVFGNDFIGIFITIVLSAVINVFMAIFSFRFYQVYRQMPAVR"
     gene            8452..8889
                     /locus_tag="PXB09_001596"
     CDS             8452..8889
                     /locus_tag="PXB09_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDL5233705.1"
                     /translation="MLSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAF
                     ACFALVWQYCFTDPTQSILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYES
                     LRQKLISAQVKLEETQAVPSFQDFANLLKLAEETWGDEYFDEL"
     gene            complement(9174..9902)
                     /locus_tag="PXB09_001597"
     CDS             complement(9174..9902)
                     /locus_tag="PXB09_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5233706.1"
                     /translation="MKSFDKVWFSAKELEELDLPDLPKQATNITRKALKELWIKRDAV
                     GVKGGGNEYHITSLPRKAQEALGFKSGINAIKDSIVREITPEEQNKGSELSGTVLNNI
                     ISMIDSFASIKVSAGFGSFNEGVTKPDGQEPYADSLLHTLGVNAKKCAVFWASGDSMY
                     PTIDNGDQLLVDLSRNEIRGDNNIYIVQNGDSVWVKRVKLLWDGVELISDNREEYELI
                     KITADQAQNLQIIGQVVHIGHSLV"
     gene            10112..10339
                     /locus_tag="PXB09_001598"
     CDS             10112..10339
                     /locus_tag="PXB09_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5233707.1"
                     /translation="MNKKKRAQDMHRADIRAELMKKGITFSQLGIENGLSKTTVRNAL
                     DKPYKNGEEIIAKALGKTPAEIWPSRYPDVA"
     gene            10354..12291
                     /locus_tag="PXB09_001599"
     CDS             10354..12291
                     /locus_tag="PXB09_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5233708.1"
                     /translation="MKDWFSAKELAGISGLSKYPTNVTRQAKKEQWATRPLKGVKGGG
                     FEYHINSLPTEVQTEIRSRFMSAVVEAKPKKLPVVRAEVDVGNLTTKQREIADARMAL
                     VAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLAELVAVANAKKTAKRTLSVRTLNGW
                     VVDYCKAENAEQRLKLLAPQVRQETKPEEIWWLSAFLGVYRQKNGICLTEAYREFEVE
                     WAYQYADNPLLLAQCPSLSQVQRAMNKLPLYVKEYGRRTGSHYKQLLSYVKRDWSVLR
                     ANDVWIGDGHSLKLKVAHPIHGKPFTPELTMIVDGAGRKVVGWSLALSENAFAVADAL
                     RHAISLHGVPAIYYSDNGGGEKNKFLDAEITGMLPRLGIRHETGIAGNPQGRGIIERL
                     NKTIGMTIARQFETGYATGADPETVRKTLYAVNSLANAKGELTPLQRKAQGKLPTWQQ
                     LIEVIQSVIDWYNNEHIHSEIRTTPARKYQQMLHAEDVVMLSPIELRDMSRPEFIRKP
                     DRGWVSWNNNHYFNLKLLDFDREEVVIGIDIHNAESVQVRTKDGRFICEAIWNGNTRE
                     AFPVAMVEQQRKERHKRRANLKQQQLDEINAELNPVLTIEQKNDFSLLATARKPKKEV
                     EPIFLTRAEKEDYEKKLAVGG"
     gene            12295..13176
                     /locus_tag="PXB09_001600"
     CDS             12295..13176
                     /locus_tag="PXB09_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5233709.1"
                     /translation="MKNQELRALMDSKGYQQKQVAQLLGVSVATVSLYLKGDYNGNVA
                     EMDRKVDELIERDKAKVVEAKYNAAFVPTLAARRGMEVMQFAHIEGEINVIFGAAGLG
                     KTQMLKEYERRNSSATLIEVDPSCTPKVLLRKIAEAVGANARGVNNELLESIVNKLKG
                     SERLLMIDEAELLSTRSLEFIRRIHDLTSVGVVLAGMPRLLVNLKGKNNELAQLYSRV
                     GFACDLGNALSEEDLGLLAESALGTNEFNAPLIKACHGNARRLSKLMRGVVRSSEINQ
                     TPISKDLVEQYSKMLIS"
     gene            13187..13507
                     /locus_tag="PXB09_001601"
     CDS             13187..13507
                     /locus_tag="PXB09_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233710.1"
                     /translation="MQKVYSEKAGEMMNPLNAFIHDSLVKLEIATLECEAMELEVERV
                     EFEAKSPPRLVLRDNCKTQDLVKNGLASLFGMKTKGGRRYDSYQMQVRGVKCVWESER
                     VTKV"
     gene            13510..13701
                     /locus_tag="PXB09_001602"
     CDS             13510..13701
                     /locus_tag="PXB09_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233711.1"
                     /translation="MKKRRMIYALYVGEENVADGTAEELAERLGVEAKTVRFMSSPAH
                     NKRVKYNGKAIRTVKVGLE"
     gene            13714..14331
                     /locus_tag="PXB09_001603"
     CDS             13714..14331
                     /locus_tag="PXB09_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3164 family protein"
                     /protein_id="HDL5233712.1"
                     /translation="MSKVTIGNEIYWKDADGNLKPEALVKEIDKERDELVRQFVSKAQ
                     ALSKALGDFKQSVFDDVGAFVSLSADKYGVKIGGAKGNITLFTYDGEYKLQLAVQENI
                     RFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEID
                     DARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDMAGV"
BASE COUNT         4333 a         2935 c         3238 g         3853 t
ORIGIN      
        1 agatggagtt gtgatgatta ccatcaacga aaacaccatt gaacaatccg ccattgcaac
       61 tttgcaaagc ttgggctggg actacaccta cggcaaaaaa attttggcag gtttagaaca
      121 cgaatggcgg gagcgaaccg ctgaggtgat tttaaagccg cttttggcgc aagcgattgc
      181 aaaattcaac ccgaatttgc ccgcttgtga ggtggaaaat gtggtggcac aggtgtgccg
      241 tgccgacagt ggcgatttgg cggagcgtaa tcgtcaggct tatgattggc taagaaatgg
      301 ggtcaaaatc acttatcagt tgtacggtga gcaggtgtct gatgtggtgc agctgattga
      361 ttttcagcgt ccagaaaata acgattttcg cattgtcaat cagctggata ttagcggcaa
      421 aaaaggcaaa cgcattccgg atttgattgg ctttgttaat ggcttgccgc tggtggtgtt
      481 tgagctgaaa aatccgctca aagaaaatgc cgacattggc aaggcgtttg cccaactgca
      541 aacctataaa gatgaaattt ctgatttgtt tgtgtttaat caggcactcg tgatttcaga
      601 cggcattgtc gcccgcatcg gttcgctgac cgctgatttc gaccgtttta ccccttggcg
      661 tgtggttgat gaaaaaaatc agagcaaacg cattgtgttt gaagatgaac tcaccgccct
      721 gctgcaaggc gtgatgacac ccaaaaatct cttggattat gtgcagaatt ttgtggtgtt
      781 tgaacgggac ggcaaaaacc gcttaattaa gaaaatcgga gcatatcatc agttttatgg
      841 cgtgaatgaa gcggtggatt gcaccttgct tgccgccaca ggcaaccgca aaatcggcgt
      901 gttttggcat acgcaaggtt cgggcaaatc gctttcgatg ctgttttatg caggtaaagt
      961 attaagccaa agcagcctga aaaatccaac tttggtgttg gtaaccgacc gcaacgattt
     1021 ggacggtcag ctttacgcca ctttttgcgg tggcgaggca ctgctcaaac aaacgccaat
     1081 ccaagccgat gggcgagacg aactccgctc tgcccttgcc agtcgttcgg caggcggtgt
     1141 gatttttacc accattcaaa aattcggctt aatggagggt gagcttgccc accctgtatt
     1201 aaacgagcgg gaaaacatca ttgtgattac cgatgaagca caccgctcac aatatggttt
     1261 tagccaaaaa atcaaccaca aaggcgagta tcgtgagggt tatgccaagc atttacgcag
     1321 tgcattgccg aatgcctctt ttattggctt tactggcaca ccgattgaac ttgatgacaa
     1381 agacacccaa gaagtcttcg gtaaatatgt ctcgatttat gattttgaag atgcggtgga
     1441 agatggggca accgtgccga ttatttatga gccacgccaa atcagcttag gcgaaagtgg
     1501 cgagttttcc aaagtgatgg aagaggcaca acaactgatt gatgacgatg aaaacagcta
     1561 taacttccgc ctgcgtgaaa aactgcacag cgtggatagc cgtttgcaaa aaatggcgga
     1621 agatattatt gcccattacg atgagcgtac caaacagcaa gacggcaagg cgatggttgt
     1681 ggtgatgagc cgtgccattt gcgtgaaatt gtacgaaaaa atcaccgcac ttcgtccaga
     1741 atggcactca aacgatgtgc ttcaaggcag cattaaaatt gtgatgacaa gtaatgccag
     1801 cgaccctgcc gagtggcaaa aacacaatca ggataagaaa accttagaaa aacgctttaa
     1861 agacccagac gatccgctca acatcgtgat tgtgcgggat atgtggctga caggctttga
     1921 tgcgccctgc tgtaacacaa tgtacattga taaaccaatg agcggacaca acctgatgca
     1981 ggcaatcgct cgggtaaatc gggtatttcg caacaaaagc cgtgaaaatg gcggcttgat
     2041 tgtggattat gtgggcttga ccgatgagct ggaaaaagcg atgaagcagt acaccaacgc
     2101 aggcggtaaa gaaaagccgg tgcgggacat ttcagcggtg ctggaaaaaa tggtggaaca
     2161 tatcacggtc attcatgggc aatttgccac accgattgac ggacaagcgg ttgatattgc
     2221 caaaatgttg caaatcagcg aaccgcctaa actgctcaat gcgattttga catcagccaa
     2281 ccatattctt gccctagacc gcattcagcc acctgataac actgccaaag acaaaacccc
     2341 acgcaaaaac gcctttttgc aatcggtacg cttggcgaaa aaaggttatg ctttgtgtgg
     2401 ggcattaaaa gcagttgaac cctataaaca ggaactggcg ttttatgatg cagtgcgtgc
     2461 caccattatc aaaaacagca ccgctcctcg caattcttcg agcgaaaatg accgcttgtt
     2521 gcagcttacc gccttgatga atcgtgcggt acagtcggat ggtgtggtgg atttatttga
     2581 tttgctgaaa aaagaccgcc caaacatcaa cctgctttct gatgagtttt tggaaacagt
     2641 aaaaaacagc ccaaccaaag atttgtggct atcagcaatg gagcgttatc ttgcctcaca
     2701 actgcgagag caaagcggtg ccaatcttgc cacaaaaaaa gcatttgaac agaaactcaa
     2761 agaggcgatg aaccaatacc acaaccacaa tttaagcgta ttggaaattt tagaagagct
     2821 gatcgccctc gccaaagagt ttgaagcccg ccaaaaacga ggggaagcgt tgggactaag
     2881 ccctgcggaa atggcgtttt atgatgcttt ggcacgtaat gaaagtgcgg tgcgggaaat
     2941 gggcgatgag gtattgatga aacttgccaa agacattacc gataaattac gcaaatcggt
     3001 caccgtagat tggcaatata aagactcggt tcgtgccaaa atgcgaacct taatccgcat
     3061 tgctctgcgt acctataaat acccgcccga tttacaggcg gaagcgattg agtttgtgtt
     3121 gcaacaagcg gaagagatcg ccggagagtt cgctatcacc gaaacggcgt aatctatatt
     3181 agggcgtgca atgtacgccc taaatttatg ctaataacct ctgccacatt tcccgcacaa
     3241 atgctcgctc ggtggtaaat tcacttgcgt ccaccacgct gtctttgcgt aataagttta
     3301 ggtggtggat tttgttacgc agtgcggtgt agcaatgttg tagctgttcg ctttgttcgg
     3361 aacttaaaat accgcattct actgcgctgt cgaaaattcg gacattatcc gaccatactg
     3421 ccattttcgg gtgttggtgg ctgtgggcta ataccaaata ttgggcgata aattcaatat
     3481 cggtaatacc tccttgatct tgtttaatat gaaattgctc ggctgaatgc gagcttaaat
     3541 gttggtacat tttctgtcgc atttcgcaaa tttcttggcg taattgaccg cttgcacgag
     3601 gctgagcaag cgtgctttgg cggatttttt caaaggcttg tttgaggttt tccgccccaa
     3661 atacacatct tgtccgcacg agggcttggc tttcccacgt ccacgcttca tttttttgat
     3721 aatgctcgta ggcattgaaa gtgctgacta aaagcccagc ctcgcctgat gggcgaagtc
     3781 gcatatccac ttcatatagt acgccggcac tggtattaag gttaaaaatc gagttaattt
     3841 tttgagccaa ttttaagtaa aattgatggc ttgaaatctc ttttttaccg ccaacagttt
     3901 ggctatcctc tggggcatta tgcaagaaaa ccaagtcgag atctgaatta tagcccagtt
     3961 caatcccgcc tagcttgccg tagccaataa ctgcaaaccc tttttcatca gcctctaaat
     4021 gttccggcac accaaagcgt tggctgactt gcttccacgc catatttacc accgcattaa
     4081 taatcgcttc tgctaagtaa gtaagatgat cgctgatctt cattaccagc agcacgccta
     4141 aaatatcagc agcggcgatg cgtaaaattt gggtttgttt gaactgacgt aagccatcaa
     4201 tcagtgcttc ttcatcttct tcaggaatgc ggattaaata atcctgcaag gcagattgat
     4261 atttttcaaa agcctgcacg tcggttaagc ctctatggct catcagctca tcaagtagca
     4321 ttggatatcg agctatctgt tccgcaatca taaccgactt actacacaat gctaaaagtt
     4381 gaggcagaat ctgctctttt tcgagcatta attccaaata ggtagttcgg gtggtgattt
     4441 tatcgacaat attcaacacg cgaggcaata acaataaatg atcttcacct ttaaaaatgc
     4501 tgtcggcaat tctaggcatt aaattgcgta gcacctctcg ccctcttacc ccaatcgggc
     4561 gttttaccca atcttgaaag gtagtagaaa agtgacggaa aatctccgta taatcatttt
     4621 ctgcaacctt tggataacct tttagcactg cggataaatc ttcaaggcga atgttatagt
     4681 gcaaaatgtc tttccattcg gctaattttt cattaaccgg attgcagttg gcttgtgttt
     4741 cctcttcacc gataatttca ttaaaaatct ggcgtactgc ttgttgatat tggctcaata
     4801 ctgccataaa ttgttgccaa tcgttaaagg aatgctccac ccaatgcgtt ttttcgctat
     4861 atagatcttg ctgataatag ctttggcaag caaatacaag gcgggcttgc gaggcttcat
     4921 cagtgggtag ggtttgagtt tgtttatcgt caatcgcttg taatacattt tcaatttgac
     4981 ggtaaaaaat ataggcattg tggagcgttt ccacctgcgt ttgggttaat aaatttaatt
     5041 ctgccaagcg tggtagcact tttaacaggc tacgttcttg taaaatttta tctcgcccgc
     5101 cacggatcat ttggaaagtt tgggcgataa actccacttc ccgaatccca ccggcaccaa
     5161 atttaatatt atcggttaaa ttacggcgaa ccacttcacg gctgattttt tctttcattt
     5221 cacgcaacga ttggattgca ctgaaatcca gataacggcg gtaaacaaaa gggcggagca
     5281 tttgctttaa atagcgatga tttaaatttt ggctatcctc gcctaaaatt tttgctttaa
     5341 tcatcgcata acgttcccaa tcacgccctt gctcttggta ataatcttcc attgcagtaa
     5401 aactcagcac caaggctccg ctatcaccaa aggggcgaag tcgcatatcg gtacgataca
     5461 cgaaaccatc agcggtgatc tcatctaata ctttaattaa ccgctgcccc attcgggtaa
     5521 aaaatttgct gttttcaatc gatttgcgtc caccttcggt ttcaccaata tcggggtagg
     5581 taaaaatcag gtcaatatcg gaagaaaaat taagctctcg tccgcccaat ttgcccatac
     5641 ctaaaatcag cagttcttgt gtttcgccaa gagtgttctt tggcgtgcca tattcggcac
     5701 agcaacgctg aaacaaccaa tctcgagcgg ctagaatcag gctctcggct aaatccgaca
     5761 aatgctgaaa taccaattct accgtcgcta atttatttga ctgaataaag ctcagacgag
     5821 ccaattcacg gtggcgaaat tgccgcaaaa ccctccccaa catttcttca ttttccactc
     5881 ttgctaatat ttttgctaaa cgctcagtat aattgcagca atcatcaggc gtaggaaact
     5941 tggcaagcca ttctgccagt aaatccggct gtttttgcaa ggtttgatgc acgaaattgg
     6001 aaagcgaaat cgccgtcaca agcggttgaa tttgctcaga attttgcaaa ttgggcggta
     6061 aattgagttg ggataaggga attagggtgg taagcataaa tttaggctca aaattgaaaa
     6121 tagatagaat tttacgctcg atcaattccc ctctttagca aagagggctt aggggagatt
     6181 tggcagaggt aattttactc tcatacgaaa cattaatatc gtaatcaaat ctcccccagc
     6241 ccctcttttc taaagagggg agaaaaaatt aaaacactct tttaaacggt ttaataatca
     6301 catcgctata cacaccggct tccacataag gatcttggct tgcccattgt tgagcttctt
     6361 caagtgagtt gaactctgca attacagttg aaccggttac gcttgagccg tcttcagtcg
     6421 ggttaggccc tgcgattaat aatcgacctt ctgcctgtaa tttttccaaa cgagccaaat
     6481 gagccgggcg aacttctaaa cgtttttcca acatattggg attatcttgg gcaaagataa
     6541 cataatacat actattctcc ttgtttttca ggggttaaat caattagcga taatgcttcg
     6601 tctaattcgg ggttattttc tctcggcaca gcacgcggtt tgccttcttt atcaatcgct
     6661 acataggtaa ataaggcttc ggttacgaga taacgttcgc gattgccctc ataaacttgt
     6721 ttgataaaga cctcgacttt cacttgcatc gaagaacgcc ctatgtgcat taacttgccg
     6781 tagcagcaga ccacatcacc gactgaaatc gggcggtgga aaatcatttt atctaccgtt
     6841 accgtaacga ctctaccttt tgccaactct ttggctaaaa ttgcaccgcc taaatccatc
     6901 tgcgacataa tccaaccgcc gaaaatatcg ccattggcgt tagtatctga cggcattgcc
     6961 aaagttctta aaatcagttt cccttccggg gcttttccat agggtttatc tttcattttt
     7021 ttgttcctgc ttttcagcat cttttaagta agggtaaagg acgaaaccgg taataaccgt
     7081 tgcgactaag gttaagccaa taatgccaaa ggatttgaaa tcaacccaaa tctcttccga
     7141 taaatattga ctgatataaa tattcagcag catacaaatc agaaagaata ctgcccaacc
     7201 gaagtttatt ttattccaca ctgcttcagg caactgaatt tctttgccta ataatttttt
     7261 gattaatggt gttttgaaca caaattggct cactaatagc accaatgcaa acagagcgta
     7321 aacaatggtt actttccatt gtaaatattt aacttcatta aaataggcac tcagtaagcc
     7381 gaaaaagacc accgagccac ccataataat ttgctgtttt tcaattttgc cgtagagcat
     7441 ttttaaggcg atcatttgca cgattgtagc gataaccaat gcgatagacg ccatctgaat
     7501 accgctcatt ttatacacga caaaaaacag aatcagcgga ataaattcaa gtaactgttt
     7561 cattgatact cctaacgcac tgccggcatt tggcggtaaa cttggtaaaa gcggaagctg
     7621 aaaatcgcca taaagacgtt aattaccgca cttaaaacaa tggtaatgaa tatgccaata
     7681 aagtcattac caaacactgt gaacaaacga gataacatcc ccggtaataa ataagaaatc
     7741 acacaaaata aaatcagcgg tagcattttt ccacgtgata attgaagcgt aaatttaata
     7801 ctttccgata gacttttctg cggtttctcc aataaataag cataaatcac taacgataat
     7861 ttgataaaaa aataaaaacc gactaccaac accggcaatg caataatcac tgtttcaggc
     7921 gatgccattg caaaagatgc accgagagaa agcggtaaca ccatcacaaa ttgtaacaac
     7981 agcacaggta ggaagtgctt taatgcgttt cctgcatttt ggaaaaattg acgataattg
     8041 ccatcgttaa tcgattggat attgaaaatc attaagacat tgatcaaaag attgacaaca
     8101 cctaataaaa tagttggcaa tagtatagac accattttag aggcatcaat ttgaagttgt
     8161 tgcggttgcg actccgccat tagctcaggc gaatttggcg acactaaaat aaaaaccaac
     8221 tgcacaacca caatggtgac aatggcaaac agtgaaaatg cttgttgatt acgcataaag
     8281 ttccaacttt gctgcaataa atcgacaaat ttaattgaca taaaataccc ttcaatagat
     8341 tgtaaatatt ttgttgtgaa gtatagcaag gcttgagcca aactgcatta acctattgta
     8401 gattttaatc agttagctaa aataaaagaa aaatttgaaa gagataatcc tatgttaagc
     8461 ttatttgatg caggacagcg ttacctcaac actctgccga atcagaaaaa attagccaat
     8521 tttatgccag attaccacat tattcgcttg gtaaaatttt cctctaaagt aatgcctgct
     8581 tttgcttgct ttgcattagt ttggcaatat tgctttaccg atccgaccca atctatttta
     8641 gccaattcgg tacttactgc tgttttcgcc atttctattc cgtttcaagg gttatattgg
     8701 cttggaaaac gggcaagatc accgttatct ttatcattat tggaatggta tgagtcgctt
     8761 agacaaaaat taatttcggc acaagtcaaa ttagaagaaa cacaagcggt accttctttc
     8821 caagattttg caaatttact caagctagca gaagagactt ggggagatga atattttgat
     8881 gagttataaa ataaaaaaag ccccacttaa aataagtggg gtaaaacttt tgttctaatt
     8941 ctggaggttt gaattactgt tttattgtgg ggtactgatc ttttttgcat agagagaaag
     9001 aaaaaaattt gggcggaaaa ataacggcga gccccgtgaa tacaagggtt cgccgttatt
     9061 gtttggttgg agctatgcaa aaaacaaaat gagcaggatt agaaaaaaac gagcagtttt
     9121 tgcgttattt tttgcatagg tttgatcggt tttaaaacta ttttaaatct gttttaaact
     9181 aaagaatgcc cgatgtgtac cacttgcccg atgatttgta ggttttgggc ttggtctgct
     9241 gtaatcttta ttaactcgta ctcttctcgg ttgtctgaaa taagctctac accgtcccat
     9301 agcagtttta cacgcttaac ccaaacactg tcgccgtttt gtacaatgta aatattattg
     9361 tcgcctcgta tctcattacg acttaaatca actagtagct ggtcgccatt atcaatagtc
     9421 ggatacatcg agtctccact tgcccaaaaa acagcacact tcttggcatt aacaccaagc
     9481 gtatgcaaca agctatcagc ataaggctct tgtccatcag gttttgttac accttcatta
     9541 aagctcccaa agcctgcaga tactttaata gatgcaaaac tatcaatcat tgagattatg
     9601 ttattcaaaa cggtgcctga taattcagat cctttgtttt gctcttcagg tgtaatctct
     9661 cttactatgc tatccttgat tgcatttatt ccacttttaa atccgagtgc ttcttgggct
     9721 ttacgaggca atgaagttat gtgatattca ttccccccac cttttactcc aactgcatca
     9781 cgttttatcc agagttcttt taatgccttt cttgtaatgt ttgttgcttg ctttggaagg
     9841 tcaggcaaat ccaattcttc tagttctttg gctgaaaacc aaactttatc aaatgatttc
     9901 ataattaacc ccttcttaat caaaaatgat tttaaaatca aaattgatta agttatttaa
     9961 aatcaatagc ttacaaatag atttaaaaaa gatttaaaaa atttattaaa tcactattga
    10021 tttagaaaag aataagtatt atatttagtc ctgtagttaa tcaagtacgc taaagcgtag
    10081 caaataaact aaatgtggag gatctcacaa aatgaataaa aagaaaagag ctcaagatat
    10141 gcatagagct gatattcgag ctgaattgat gaagaaagga ataacatttt ctcagttagg
    10201 gattgagaat gggctttcca aaacaacagt aagaaatgct cttgataaac cttataaaaa
    10261 cggtgaagaa attatcgcaa aagcattagg aaaaacgcca gccgaaatat ggcctagtcg
    10321 ttaccctgat gttgcataac aaggatagct gttatgaaag attggtttag tgcaaaagaa
    10381 ttagcaggta ttagtggctt atcaaaatac ccaacaaatg taactagaca agccaaaaaa
    10441 gaacaatggg caactcgtcc attgaaaggg gttaaaggag gtggttttga atatcacatt
    10501 aactctttac ccaccgaagt tcaaaccgaa atccgctccc gctttatgtc ggcggtggtg
    10561 gaagccaagc cgaaaaagtt accggtagtg cgtgcagagg tggatgtggg aaacctgacc
    10621 accaaacagc gagaaattgc tgatgcacga atggcactgg tggcgtatgt gttggagttg
    10681 gaaggctcaa tgagccggat taaagcgata acctaccttt gcaaccttgc caaacaaggc
    10741 gaaatgccac cgcacttggc ggagctggtt gccgtagcaa atgctaaaaa gacggcaaaa
    10801 cgcacactct cggtgcgaac cttaaacggc tgggtggtgg attactgcaa ggcagagaac
    10861 gccgagcaac ggttgaaact gcttgcccca caggtacggc aggagaccaa gccggaagaa
    10921 atttggtggc taagtgcttt tttaggcgta tatcggcaga aaaacggtat ttgcctcacc
    10981 gaagcctacc gagaatttga ggtggaatgg gcgtatcagt atgcagacaa cccgctactg
    11041 ttggcacaat gccccagcct aagccaagta cagcgagcga tgaataagtt gccgttgtat
    11101 gtgaaagagt acggcagacg caccggctcg cattacaagc agttactgag ctatgtgaag
    11161 cgggattggt cggtacttcg agcaaatgat gtatggattg gtgacggtca ctcactgaag
    11221 ctcaaagtag cccacccgat acacggtaag ccgtttaccc ctgagctgac aatgattgtc
    11281 gatggtgctg gtagaaaagt ggtgggctgg tcgctggcac tcagtgagaa cgcctttgcg
    11341 gtggctgatg cactacgcca cgccattagc ctacacggtg tgccggcaat ctactactcg
    11401 gataacggtg gtggtgaaaa gaataaattt ttggatgcgg aaatcacggg gatgttgccc
    11461 cgcctcggta tccgacacga aacagggatt gcgggcaatc cgcaggggcg aggcattatt
    11521 gaacgcttaa ataaaaccat cggtatgacg attgcccgac agtttgaaac cggctatgca
    11581 accggtgcag atccggaaac cgttcgcaaa accctgtatg cggtgaactc actggcaaat
    11641 gccaaagggg aattaacccc actacaacgt aaagcccaag gcaaattgcc aacgtggcaa
    11701 cagttgattg aagtaatcca atcggtgatt gactggtaca acaacgagca tattcactcg
    11761 gaaatccgta ccacgccggc acgcaaatat cagcagatgt tgcacgcaga agatgtggtg
    11821 atgttaagcc ctattgagtt gcgggatatg agccgaccgg aatttatccg taagccggat
    11881 cgaggttggg taagttggaa taacaaccac tattttaact tgaaattact ggattttgac
    11941 cgtgaagaag tggtgatcgg gattgatatt cacaatgccg agagcgtgca ggtgcgtacc
    12001 aaagacggca ggtttatttg cgaggcaatt tggaacggta acacccgaga ggcattcccg
    12061 gtggcgatgg tagaacagca gcgtaaagaa cgccataaac gccgagccaa ccttaaacag
    12121 caacagcttg atgagattaa tgcggaatta aacccggttt taaccattga gcagaaaaac
    12181 gattttagct tgctggcaac ggcaagaaaa ccgaaaaaag aagtagaacc gatttttttg
    12241 acccgagcag aaaaagagga ttacgaaaaa aagttagcag tgggaggcta aacgatgaaa
    12301 aaccaagaac ttagagcctt aatggatagc aaaggctatc aacaaaaaca agtggcacag
    12361 cttttaggtg tatccgttgc cacagtcagt ctgtatctca aaggcgatta taacggcaat
    12421 gtggctgaaa tggatcgcaa agtagacgag ctgattgagc gtgataaggc aaaagtggtg
    12481 gaagcgaaat ataacgctgc ttttgtgcca actttggcgg cacgcagagg aatggaggta
    12541 atgcagtttg cccatattga aggcgaaatt aatgtgattt ttggggcagc cggcttaggt
    12601 aaaacccaaa tgctcaaaga atacgaacgc agaaacagct ctgcaacatt aattgaggtt
    12661 gatccgagtt gcacacctaa agtcttgctc cgcaagattg ccgaggcggt gggggcaaat
    12721 gccagagggg taaataacga actattagaa agcattgtga acaagttaaa aggctctgaa
    12781 aggttgctaa tgattgatga agctgaatta ctttcgaccc gctcgctgga gtttatccgc
    12841 cgaatccacg atttaaccag cgtgggcgtg gtgttagccg gtatgccgag attgttggtt
    12901 aatcttaaag gtaaaaataa tgagctggca cagctttata gccgagtagg ttttgcttgt
    12961 gatttgggaa atgccttgag cgaggaagat ttggggctat tagccgaaag tgcgttaggt
    13021 acaaatgaat ttaatgcccc gctaattaaa gcttgtcacg gcaatgcccg ccgattaagt
    13081 aagttaatgc gtggcgtggt gcggtctagc gagattaacc aaacaccaat tagtaaagat
    13141 ttggttgagc aatatagcaa gatgttgatt agctaaggag caagttatgc aaaaggttta
    13201 cagcgaaaaa gcaggcgaaa tgatgaaccc cttaaatgcg tttatccacg acagccttgt
    13261 gaagttagaa attgccactt tggaatgtga ggcgatggag ttggaagttg aacgagtgga
    13321 gtttgaagcg aaaagcccac cccgcttggt cttacgggat aactgcaaaa cacaggattt
    13381 agtcaagaac ggcttggcaa gcctgtttgg aatgaaaacc aaaggcggca gacggtatga
    13441 cagctatcaa atgcaggtgc ggggggtgaa atgcgtgtgg gagtctgaac gtgttacgaa
    13501 ggtgtagaaa tgaaaaaacg gcgaatgatt tatgccctgt atgttggcga agagaatgtg
    13561 gctgacggta cggcggaaga gttagcagaa cggttggggg tggaggcgaa aacagtgcgg
    13621 tttatgtcgt cccctgctca caacaaaaga gtgaaatata acggtaaagc aatccgcacc
    13681 gtgaaagtcg ggttggaata gagaggaagt attatgagta aagtaacaat cggtaatgaa
    13741 atttactgga aagatgctga tggcaattta aagccggagg cattagtaaa agaaatcgac
    13801 aaagaacgtg atgaattagt tcgccaattt gtaagcaaag cacaagcgtt aagcaaagcg
    13861 ttaggtgatt ttaaacaatc cgtatttgat gacgtggggg cttttgtcag cctatcggct
    13921 gacaaatatg gagtaaaaat tggcggtgca aaaggcaata tcacactatt tacttatgac
    13981 ggtgaatata agttgcagtt agcagtgcaa gagaatattc gctttgatga gcgtattcac
    14041 gcagcaaaag ccttgattga tgaatgcttg cacgattggt cggaaggggc aaaaccggag
    14101 cttaaggcct taattgataa tgcgtttgag gtggataagg aaggtaattt atctacagca
    14161 aaaattctct ctctccgccg tgttgagatt gatgatgcaa gatggaatca agcaatgaca
    14221 gcgatttcag atagcgtaca agtgatcggt agtaaaggtt atatccgttt ttataaacgt
    14281 gatgaaaacg gaaagtatca gccgattagt ttagatatgg cgggggttta gaatgtttat
    14341 tacttttaat gttaattat
//
LOCUS       DANLTI010000070        14177 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.070, whole genome shotgun sequence.
ACCESSION   DANLTI010000070 DANLTI010000000
VERSION     DANLTI010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14177
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.070"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            40..1122
                     /gene="serC"
                     /locus_tag="PXB09_001604"
     CDS             40..1122
                     /gene="serC"
                     /locus_tag="PXB09_001604"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDL5233713.1"
                     /translation="MTEIYNFSAGPAMMPKKVLEKAQQELLNWLDQGTSVMEVSHRGK
                     LFMELAAQSEADLRKLYNVPDNYRILFLQGGARGQFAAIPMNLIGKKGKALYLNSGHW
                     SATAAKEARNFAEIDEINILETEPQLKVSRLDFSDIAEQYDYIHYCTNETISGVEIFD
                     IPNVGNTPLVADMSSNILARGIDINKFGVIYAGAQKNLGPAGITIVIIRDDLIGNARK
                     DTPSIWNYATQRDADSMINTPPTFAWYLCSLVFQHLLAEGGLKATEERNLAKATLLYE
                     YLDSSTFYYNTVAHENRSLMNVTFTTGNDELNAKFVAEATACGLQALKGHKVLGGMRA
                     SIYNAMPIDGVKALIEFMKVFEQRNA"
     gene            complement(1179..2156)
                     /locus_tag="PXB09_001605"
     CDS             complement(1179..2156)
                     /locus_tag="PXB09_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDL5233714.1"
                     /translation="MTLAVAAIIGGLIILVWSADRFVEGAASTARHFGMTPLLIGIVV
                     IGFGTSAPEMLVSASSALSGSPGIALGNAYGSNITNIALILGLTAIIKPLSVNSDVLK
                     KELPILLAVTLLSAYLVYDANVTQLDAIILLAVFFVYMAWTIITAMKSKNDALSLDVD
                     AELTNSAKMGLGKSILWLIIGLVSLVISSQFLVWGAVEVAKFFGVSDLVIGLTIVAVG
                     TSLPELASSIAAARKGEVDLALGNIIGSNLFNTLAVVGIAGAIEPMQVSAEVFSRDVL
                     MMSALTFLLFIFGINLYRRTEGGRINRLEGLLLFAAYVGYNFYLFKTAG"
     gene            2268..4835
                     /gene="glnD"
                     /locus_tag="PXB09_001606"
     CDS             2268..4835
                     /gene="glnD"
                     /locus_tag="PXB09_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDL5233715.1"
                     /translation="MMKNSNELKTLLSAFTEQQRQAFQSENVLSLLAQRSQFYDQLLQ
                     ALWQDFGLAQYEHITLLAVGGYGREEMFPLSDLDILVLTEKPLEEAIQQRLNELFALL
                     WDSKLQLGTSVRTLEECIQIGKAEISVATNMLEGRFLLGNKSLWLRLKEALYQPDFWD
                     IKAFFRAKMAEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLISWIMLRHYGVSSFVD
                     LLNKGLLYPEEYKELIAAQAVLFRMRFALHLQLKRYDNRLRFDRQLQLSEILGYQGEA
                     NQAVELMMRDYFQATKSISQLSQLLLNSFEQAYVNELQKNAQKQPLDQYFYRQEQQLF
                     VVERKIFKTQPTTMLDLFFHLTNDPTLIANADTLRQLRLCLQQQHEPMCFLPEMREKF
                     VQLFAQPKVISRAIVPMHQLGFLSAYLPQWKGIEGLMQFDLFHIYTVDEHTVRVMLNL
                     ENFSEDPSRAFFPLCHQLFATLSEKPLLYLAALFHDIGKGREGEHAQVGALDMREFAE
                     LHGFSQAQINDMVWLVAEHLTMSITAQRRDIHDPQIISEFAKKVQNQTALSSLLCLTV
                     ADICATSESLWNDWKASLFTQLYQFTLQQLAQNLNYQAVAQEHRLQALELMKFVLSAD
                     ERIALNAFWQPCPERYFLHHTPTQLVWHALHYVKTRRLPMVLISNEYARGGTEIFVCC
                     QDQPQLFARIAQLLSQKRISIHDAQIITTENGVVLDSFIVSERDGDDDLTDERCMQIQ
                     QAMMKMLSLTETGIKFTKKPVKHLSFKRKTRLRFLPPSSKQQTEFELFTLDREGLLAQ
                     IGYIFNRLRLNLINAKITTIGERVEDFFVVSNDQGKALSEQEQLELKAILITELDSE"
     gene            complement(5012..5770)
                     /locus_tag="PXB09_001607"
     CDS             complement(5012..5770)
                     /locus_tag="PXB09_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5233716.1"
                     /translation="MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLL
                     SLIARLQPIQQGEIHLNELNIANTASQTIARQLAILTQDNVIHSRITVKDLLLFGRYP
                     HHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
                     EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIG
                     TPKEIITTENLKTVFNLDAEVLECQGKPLVIHHI"
     gene            complement(5790..6666)
                     /locus_tag="PXB09_001608"
                     /pseudo
     CDS             complement(5790..6666)
                     /locus_tag="PXB09_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
     gene            complement(6719..7687)
                     /locus_tag="PXB09_001609"
     CDS             complement(6719..7687)
                     /locus_tag="PXB09_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5233717.1"
                     /translation="MFSFFRLNLFLLILLIPISASVGVADFHWSEIFHSSEQSQIFFI
                     SRLPRTLAVILVGATLAVAGMVLQIVLKNRFIEPSMIGTSQSAAIGILLASLLFPTSA
                     LLLKMSIATLSALMGMGLFMLLIRQLPPHQQLMLPLIGIVFGNVIEAISTFIAYETDS
                     LQVLSIWFSGDFSGILAGRYELLWITAILAVVVYVMADQLTIAGLGENISTNLGINYK
                     QMTWLALIVVAMITAIVVVTVGQIPFIGLVVPNIVSRIAGDRLRKNLPAVVVLGANLV
                     LICDILGRAINAPYEVPISTIFGIIGTVIFLYLLLKEKRAEEKARG"
     gene            complement(7781..8680)
                     /locus_tag="PXB09_001610"
     CDS             complement(7781..8680)
                     /locus_tag="PXB09_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5233718.1"
                     /translation="MIKKALFALTATAVFAASAFAKDVTIPTARGEVTFKETPSKIAV
                     FDTGSLDTLQALGVKIDGMPEFKVLSYLKPSADKAVNVGTVFEPDLEALNSLNPDLII
                     VGTRTAKKFDEVSQIAKTIDMTDNGDKLIESGLQRLDSFGKLFNKEAETEKLKAEINT
                     LLDQTKAAVKGKGNGLIILVNGGKISAFGSGYRLSWIHDNLGIPMADSSIKNTGHGQP
                     VSFEFIQKLNPDWLFVLDRIAAIGQEGQSAQQVLDNELVRQTKAWKNGNIVYLSAASY
                     LAPGGYEQMKTDLTNIKTAFEKK"
     gene            8854..10317
                     /locus_tag="PXB09_001611"
     CDS             8854..10317
                     /locus_tag="PXB09_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5233719.1"
                     /translation="MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHW
                     DNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDIITLDQALKDKGVLQDVGGFAYL
                     AELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
                     VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGL
                     QPSDLIIVAARPSMGKTTFAMNLCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLE
                     MPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQERNNIYIDDSSGLT
                     PTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEV
                     PVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAE
                     IIIGKQRNGPIGRVRLTFQGQYSRFDNYTGGHYDDEY"
     gene            10307..10612
                     /locus_tag="PXB09_001612"
     CDS             10307..10612
                     /locus_tag="PXB09_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDL5233720.1"
                     /translation="MNTKPTQPITLCAIYRSKAKEGMYLYVPKRDQFEQVPETLRQLF
                     GKPEFVMMFNLTGEKPLVRAKNEEVLQLLIEQGYYLQMPPPPENLHKAFIAQQKGEK"
     gene            10612..11061
                     /gene="nrdR"
                     /locus_tag="PXB09_001613"
     CDS             10612..11061
                     /gene="nrdR"
                     /locus_tag="PXB09_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDL5233721.1"
                     /translation="MRCPFCSTEETKVIDSRLAASGYQIRRRRECISCKERFTTFESA
                     ELVVPYVIKNNGSREPFDAEKLRTGLRRALNKRPVSADDVEKAISQIIIQLQAMGERE
                     VPSRHIGTLAMNALKQLDKVAYIRFASIYLSFSDIEEFIKEIEKLKE"
     gene            complement(11135..11317)
                     /locus_tag="PXB09_001614"
     CDS             complement(11135..11317)
                     /locus_tag="PXB09_001614"
                     /inference="COORDINATES: protein motif:HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233722.1"
                     /translation="MALLADSTVDRLVAENGLVEVLGETENPKFDLTMIYAAHRYPSS
                     IVRAFVGFVLEQVKAN"
     gene            complement(11286..11996)
                     /locus_tag="PXB09_001615"
     CDS             complement(11286..11996)
                     /locus_tag="PXB09_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233723.1"
                     /translation="MNLNTLRLFVAVIQHGSLSKASERLNVPIATISRQIADLEKELN
                     IQLFDRQKSGVKPTMAGQRLYEQVHLSIEQLATAKEVLFEEQGNLKGKLRLSASPACE
                     PVLAWIADFQAAYPQVQVHCTLTDRLLDLSADGIDVAFRIGQLHGEQFIAKKVGQIGS
                     KWVAHPKFLARFGTPSTVKDLKNFPIAAWAKNEASVITLGTGRQAVEIPYLFSSNDSY
                     AIEYMAKSSGSACRQHGG"
     gene            complement(11993..>14177)
                     /locus_tag="PXB09_001616"
     CDS             complement(11993..>14177)
                     /locus_tag="PXB09_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233724.1"
                     /translation="KLYSRVGYDKGVWEALSVLLPERFDFEVFEVIDYSKEWSWFEII
                     VENLFWRQPEKINMQKLHQFFKNSPYFNQATWINILYQLATEINHPLNIKYLHNKLYS
                     FSLADRDEIWTAFIALESDQCPAIERLLTWCQKSSGQENIEPEALLLGAIAVSWLFTS
                     TDKRSRNGYINALAHLLWNRLEIALALFKEFIEVNDPYVMEGILSAIHGAVAYSENSS
                     GLKALALEIDNQIFNQPETEEIYPNVLVRDYARHIIEYSLQKDEYSSDDIEIIRERIT
                     PPYRSSFPQNLPTNEEIDKKYHSDGQRIIIRSMTTEYGRGMCGYGDFGRYTFEAKFRN
                     WESYKFGNLINVDLLSNYACQMIFEQFGYDDKKHLEFDKETRSRYWRRDDTNKIERIG
                     KKYQWLALYEILARVMDNFPTFSNRYADEIGLEYITNLDNFYLPKTQIKIVPPTKTDV
                     FFQYINQKQCKTKHYFTIQNDELIDDWVKINDFPDVSNLLEVTINDEQWLVLERHDDF
                     RELAKFGQKETYDRQMWLQIRSYLVKESQFSKAKNWLAQQDFMERWMPEGNEHYGMNI
                     HQFFAENTLNEWQEIYRHRENKSPSFKVIPSVDSHTWESTYGNDGISFYAPIPMLYHG
                     MKMKNAIKDGYWVDLQNNLVCFNPEINEKFQNSLLVKKDKFLDFLKEHKLKLVWTVLG
                     EKHAYKESKFLQELSGVYYLYGKNQQVQGSIKHFIQEIEHWGEKQ"
BASE COUNT         4550 a         2782 c         2764 g         4081 t
ORIGIN      
        1 atagaataga atcaatatta ttactatacg aggtgaaaaa tgacagagat atataacttc
       61 agtgccggcc cggcaatgat gccgaaaaaa gtactcgaaa aagcgcaaca agaattatta
      121 aattggctag accaaggcac atcagtgatg gaagtcagcc accgtggaaa gctatttatg
      181 gagctggcgg cacaatctga agcagattta cgcaagctgt ataatgtgcc ggacaattat
      241 cgtattctat ttcttcaagg tggtgcaagg gggcaatttg cagccattcc aatgaattta
      301 atcggtaaaa aaggcaaagc gctttacctt aattcagggc attggtcggc aacagcagca
      361 aaagaagcac gtaactttgc ggaaattgat gaaatcaata ttttagagac tgaaccgcaa
      421 cttaaagtga gtcgtttaga tttcagcgat attgcagagc aatatgatta tatccattat
      481 tgcaccaatg aaaccatcag tggggtagaa attttcgata ttccgaatgt cggaaatacc
      541 ccgttagtgg cagatatgtc gtctaatatc ttagcccgag ggattgatat caacaaattt
      601 ggagtaattt atgccggagc gcaaaaaaat ctagggcctg ctggcattac gattgtgatt
      661 attcgtgatg atttaattgg caatgcacgc aaagataccc catctatttg gaattatgca
      721 actcagcgag atgctgattc gatgattaat accccgccaa cttttgcttg gtatttatgt
      781 tctttagtgt tccaacattt actggcagag ggtggtttga aagctactga agaacgtaat
      841 cttgctaaag ctacattgct ttatgagtat ttggatagtt caacattcta ttacaatacg
      901 gtagcacacg aaaaccgttc cttaatgaat gtaaccttta ccacgggtaa tgacgagcta
      961 aatgcaaaat ttgtggcaga agcgaccgct tgtggtttac aggcattgaa aggccataaa
     1021 gtattaggtg gaatgcgtgc ctcaatttat aacgcaatgc cgattgatgg ggtaaaagca
     1081 ctcattgaat ttatgaaggt atttgaacaa cgtaatgctt aattcaagct taagaatata
     1141 aattaaagag ccacgtttgt ggctctttga atttggcact agcccgcagt tttaaacaaa
     1201 tagaaattat agcctacata agcggcaaag agtaataagc cctctaaccg attaattctg
     1261 ccaccttctg tccgacgata gaggttgatc ccgaaaatga ataataagaa ggtgagagcc
     1321 gacatcatca agacatcgcg agaaaacact tccgctgaaa cttgcattgg ttctatagca
     1381 ccggcaatcc ccaccacggc taacgtatta aataagttag aaccgataat gttacctaaa
     1441 gctaaatcca cttctccttt acgagcagct gcaatagaag aggctaattc aggtagtgag
     1501 gtgcctaccg ccacaatagt aagcccgatt accaaatcac tcacaccaaa aaatttagcc
     1561 acttcaactg ctccccagac taagaattgg gaactaatta ctagcgatac taaaccaata
     1621 attagccaaa gaatggattt tcctaatccc atcttagcac tattggttaa ttctgcatca
     1681 acatctaagc ttaatgcatc atttttactt ttcattgcgg taataattgt ccacgccata
     1741 tatacaaaaa acacagcaag taaaataatc gcatcaagtt gagtgacgtt tgcatcataa
     1801 accaaataag cagaaagcag ggtgacagcc agtaaaatcg gcaactcttt ttttaacaca
     1861 tcggaattaa ctgatagtgg tttaattatt gcggttaaac ctaaaatcag cgcaatattg
     1921 gtaatgttag aaccgtaggc attaccgaga gcgatacccg gcgatccgct taatgcagaa
     1981 gatgcagata cgagcatctc cggtgcagat gtaccaaaac caatgaccac aataccgatt
     2041 aacaatggtg tcataccaaa atggcgagcc gtagaggctg ccccttccac aaaacgatcc
     2101 gcactccaaa ctaatataat taagccaccg ataatagcgg caacagcaag tgtcataaac
     2161 tatcctttta gatgaaaaac ataaaggcat tataagcatt ttagccaaaa taaatatagg
     2221 caaacgaaaa taaatgacct attattttgc cagtttagga agagattatg atgaaaaaca
     2281 gcaacgaatt aaaaacgctt ttatcagcat ttacggagca acagcggcaa gcatttcaat
     2341 ccgaaaatgt actcagctta cttgcacaac gtagccaatt ttatgaccaa ctactgcaag
     2401 cactttggca agattttgga ctcgctcaat atgaacatat taccctatta gcggtagggg
     2461 ggtacggacg tgaggagatg tttccgcttt cggatctgga tatcttagtg ttaactgaaa
     2521 aaccgctaga agaggctatt cagcagcgtt taaacgaact atttgccttg ctttgggaca
     2581 gcaaactgca acttggcacc agtgtgcgta cgctcgaaga atgtattcag attgggaaag
     2641 cagaaatttc ggttgccact aatatgttgg aagggcgatt tttattgggt aataaatcgc
     2701 tttggctaag attaaaagaa gcactttatc agccggattt ctgggatatt aaagcgtttt
     2761 ttagagcgaa aatggcggaa aaaaatgagc gttatgcacg ttatcataat actagctata
     2821 accttgagcc agatctcaaa catagcccgg gaggattgcg agatctgcat ttaatctctt
     2881 ggattatgct acggcattat ggtgtatctt cttttgtcga tctcctcaat aaagggctac
     2941 tttacccgga agaatataag gagctgatcg cagcacaagc ggtacttttt cggatgcgtt
     3001 ttgcacttca tttgcaactg aaacgttacg ataatcgcct tcggtttgac agacaattac
     3061 aactgagtga aatattaggc taccaaggcg aagcaaatca agcggtggaa ttaatgatgc
     3121 gagattattt tcaagccaca aaatctattt cgcaactgag ccaattattg ttaaacagtt
     3181 ttgaacaagc ctatgtaaac gagttgcaaa aaaatgcaca aaaacaaccg cttgatcagt
     3241 atttttatcg gcaagaacag caattgtttg tggtcgaacg caaaatattt aaaacccaac
     3301 ccacaacaat gttggatctc ttttttcatc ttactaatga ccctacgtta atagcgaatg
     3361 ccgacacctt acgtcagttg agactgtgtt tacagcaaca acacgagcct atgtgctttt
     3421 tgcctgaaat gcgagagaaa ttcgtacagc tttttgctca accgaaagtc ataagccgag
     3481 caatagttcc aatgcaccaa ctgggttttt taagtgctta tctaccgcaa tggaagggga
     3541 tcgaagggct aatgcaattc gacctattcc atatttatac agtcgatgag catacggtca
     3601 gagtcatgtt aaatttagaa aattttagcg aagatccaag tcgggcgttt ttcccactat
     3661 gtcatcagct atttgcaacg ctttctgaga aaccgttgct ctatcttgcg gctcttttcc
     3721 acgatattgg caagggtaga gagggcgaac acgctcaagt tggtgcgctg gatatgcgag
     3781 aatttgcgga actacacggt ttttctcaag cacaaatcaa tgatatggtt tggctggtgg
     3841 cagagcattt gacaatgtcg atcaccgcac aaagacgaga tatccacgat ccgcaaatca
     3901 tcagcgaatt tgcaaaaaaa gtgcaaaatc agaccgcttt atcttcacta ctttgtttaa
     3961 cggttgcaga tatttgtgca accagtgaga gcctctggaa tgattggaaa gcctcgctgt
     4021 ttacccaatt atatcaattt acgctacagc aactggctca aaatttgaat tatcaagcag
     4081 tggcacaaga gcatcgcttg caagcattag aactgatgaa gttcgtgctt tcagctgatg
     4141 agcgaatagc attaaacgca ttttggcaac cttgcccgga gcgttatttt cttcaccata
     4201 caccgactca gttggtatgg cacgctctgc attatgtaaa aactcgccgg ttgccgatgg
     4261 ttttaatcag taatgaatat gcccgtggtg gtacagaaat ttttgtatgt tgccaagatc
     4321 aacctcaact gtttgctcga atcgcccaat tactcagcca aaaacgcatt agcattcacg
     4381 atgcacaaat tattactact gaaaatggtg tagtgttaga cagctttatt gtaagtgagc
     4441 gtgatggtga tgatgattta accgatgaga gatgtatgca aattcagcag gcgatgatga
     4501 aaatgttaag cttaactgaa acaggcataa aatttaccaa aaaaccggtg aaacatttgt
     4561 catttaagcg taaaactcgg ctgcgttttc ttcctccgtc atcaaagcaa caaaccgaat
     4621 ttgaactttt taccttggat agagaagggt tgttggcaca aataggctat atttttaacc
     4681 ggctccgatt aaatttaatt aatgcgaaaa ttacgactat tggtgaaagg gtagaggatt
     4741 tctttgtggt cagtaatgat caaggaaaag ctttatcgga acaagaacag ttagaactaa
     4801 aagccattct aattaccgaa ctagatagtg aatgaaaaca accgcttgga gtgaagactg
     4861 caagcggtaa atttttcaac gttttaggta aattaaatca cgagttaaga gaggttgaga
     4921 attcaagaaa ttagaaacta aatataagtt tctatcgttt agattaataa attaagacgc
     4981 aatttttatt aattaccatg atcttcaaac gttaaatatg atgaataact aaaggtttgc
     5041 cttggcattc taacacttcg gcatcaagat taaacactgt ttttaaattt tcagtggtga
     5101 taatctcttt tggggtgccg atcatcttaa ttccaccatc tttcattgca ataatagtat
     5161 ctgcgtaagc agcagcaatg ttgatgtcgt gtaccaccat tatagtagtt aaggcgagtt
     5221 catcggttaa ttttcgtaat aatttcatta attcccgagc atggaacata tctaaattat
     5281 tcagtggttc atctaataag atatgatcgg tttgctgaca gaaggtcatt gcaattaatg
     5341 cccgctggcg ttgccctccg gataattcat ttaagaatcg gtgggagaaa gtcgataaat
     5401 caaatcgtac cagagcctct tctacaatgg cattatcgtg cgaagtgatt ctgccttgat
     5461 gatgagggta acgcccaaat aacagcagat ctttgacggt aatacggcta tgaatcacat
     5521 tatcttgggt caagatagcc agttgtcgag cgatagtttg agaagctgtg ttggctatat
     5581 tcagctcatt taagtggatt tcaccctgtt ggataggttg caagcgtgca attaaagaga
     5641 gcagggtgga tttgcccgca ccatttgctc cgattaaagc ggtaatacca ccatttggaa
     5701 tggttaaatt gatattattc agaatcgtgg cattcccgat tttgtggtga agatttttaa
     5761 ccgttatcat tttcttcctt aatttatggt tattttttcc gttttaaaat gagataaata
     5821 aagacaatac cgccaataaa ttcaataacg acactcagaa ccccttgcat tttcagcact
     5881 tgctcgaaga ttgcctgccc taaaattaag gtgatggcag agattaaaaa agtcattggt
     5941 attcgcacgc tatggcaaac agtcgggcta attgcattaa caatggcaca aacaagtagc
     6001 cctagaaata gaatcgggcc aacaagtgcg gttgaaacag acaccaacaa tccacaacag
     6061 attagtaatt gacgtgaaaa ttgatgatat tctaacccaa gcccaattgc cttatctttg
     6121 ccaagtaaca aaatatctaa tttatgccgt tgtaaccaga cccaaatggc agagagaata
     6181 gcgatacagc ctccaatcca aagtaatgtg ggggtagtca ggttaaatga ggcaaagaag
     6241 agccttgagc aacggcaaac tctgttgggt cgacattcgt tgcaacaaat tatttaggct
     6301 tctaaataag acaccaaaga tgacaccgat taaaagcatt cgggttaaat cggatcgatt
     6361 tcgattcagt gaactaaata gtaatattga tgcccctagc attaacaagg tttcaaagaa
     6421 aaacttatag cttgggtcta actgagtaaa gcctaaaccg ccaaataaaa atactaacga
     6481 ggtttgcaat agcaagtaga gcgaatcgaa ccccaaaata cttggagtta aaataggatt
     6541 atgtgtgagt gtttggaata gcagggtcga aataccaatc gtataagcaa tagtacagag
     6601 caaaataagc tttttgccac gcagttgcaa tataaagtcc caattacctt tcgcattata
     6661 ggtcatataa aacagaatac ttgctaataa gattaagctt aaaacgataa agcgtgatct
     6721 aaccacgagc cttctcctca gcccgtttct ctttgagcaa taaatagagg aaaatcactg
     6781 tcccaataat cccaaaaata gtagaaatcg gcacttcata aggggcattg atggctcgcc
     6841 ctaaaatgtc acaaatcagg actaaattcg cacctaacac cacgaccgca ggcagatttt
     6901 tacgcaatcg gtcacctgct atgcgagaga caatattagg gacgaccaag ccgataaacg
     6961 gaatctgtcc aaccgtcacc acgacaatag cggtaatcat cgccaccaca attaaggcaa
     7021 gccaagtcat ttgtttgtag ttaatgccta agttggtact aatattttca ccaaggcctg
     7081 caatggttaa ttgatctgcc atcacataaa ccacaacagc cagaatagcg gtaatccaga
     7141 gcagttcata ccgacctgcc aaaataccgg agaagtcgcc ggaaaaccaa atcgaaagca
     7201 cttgtaggct gtcagtttca taagcaataa aagtgctgat agcttcaata acattgccaa
     7261 aaacgatccc gattaatggg agcattaatt gttgatgagg cggtaattga cgaatgagca
     7321 acataaaaag ccccattccc attaatgcac ttaatgtggc aatagacatt tttaacagta
     7381 atgctgatgt tgggaaaagt aaactagcaa gtaaaatacc aattgccgca ctttggctag
     7441 tgccaatcat actaggctca ataaagcggt tcttcagcac aatttgtaat accatacctg
     7501 caacggctaa ggttgcaccg actaatatca ctgcgagcgt tcttggtaaa cggctgataa
     7561 aaaagatctg actttgttcg gaagaatgaa aaatttcact ccaatgaaaa tctgccacac
     7621 ccacactggc actgattgga atgagcaata ttaaaagaaa tagatttaat ctaaaaaaag
     7681 agaacatagt gataaatagc aagcggtcat attctctctc ttttttacaa atgcaggcac
     7741 ttgcaaaaat aggaggaaat ctgaccgctt gtaaggttaa ttattttttc tcaaatgctg
     7801 ttttaatgtt agttaggtcg gttttcatct gctcataacc acccggcgct aaatatgagg
     7861 cagcacttag ataaacgata ttaccgtttt tccaagcttt agtttgacga actaattcat
     7921 tatccaacac ttgttgggct gattgacctt cttgtccgat agccgcaata cggtctaaca
     7981 caaacaacca atccggattg agtttttgga taaattcaaa cgaaacaggc tgaccgtgac
     8041 cggtattttt aatgctagaa tctgccattg gaatccctaa attatcgtga atccaactta
     8101 aacgataacc tgaaccaaat gcagaaattt tgccaccatt gactaaaata atcagtccgt
     8161 tacctttacc ttttactgct gctttggttt ggtctaataa agtattaatt tctgctttta
     8221 gtttttcggt ttccgcttct ttattaaata atttgccgaa agaatcaaga cgctgtaatc
     8281 cgctttcgat taatttatcg ccattatccg tcatgtcgat ggttttcgca atttggctga
     8341 cttcatcaaa tttttttgct gtgcgtgtgc caacaatgat caaatccgga tttaaagaat
     8401 ttaacgcttc taaatccggc tcaaataccg taccgacatt caccgctttg tctgcactcg
     8461 gtttaagata agaaagcacc ttaaattcag gcataccgtc aatttttaca cctaaggctt
     8521 gtaaagtatc caaacttccg gtgtcaaaca cggcaatttt agacggggtt tctttgaaag
     8581 taacctctcc acgtgcagtt ggaatagtaa catctttggc aaatgcagaa gcagcaaaca
     8641 cagcagttgc ggtcaatgca aacaaggctt ttttaatcat tggataactc catttatatt
     8701 gaaaataatt ctcaaagatt ttaacgaaaa ttgattttaa gtaaagcgga aaataacaag
     8761 cgggcgaatt ttgcctaaaa tttgcaaatt tcaatttaat taaaattccg atacactatg
     8821 tacatcaata cgtcattata gcaagagaaa aatatggcag aatatagcgg aacaacccaa
     8881 gagaagatga aagataagca ggttgagcaa attaatatct caccacattc gattgaggca
     8941 gagcaagcgg tgcttggtgg cattatgctc agtaatgatc actgggataa tgttgctgag
     9001 cgtgtacaac cgcacgattt ttacaactat gcgcatcgaa ttatttttga acaaatggcg
     9061 gagttggtgc gccacaataa accgattgat attattacgc tggatcaagc cttaaaagac
     9121 aaaggggtgc tgcaagatgt aggaggtttt gcctatttag ccgagctttc taaaaatacc
     9181 ccgagtgcag caaatatttt agcctatgcg gatattgtgc gagatcgttc cgatttaaga
     9241 agtgtaatca gtgccggcaa tcaaattgcg gaaatgggct acaaaacgaa agggcgtaac
     9301 tccaaagaag tgttagacga ggcagagcga attgtgtttg aaattgcaga aaaacgcaat
     9361 aacgccaatg aaggtccaca acgtattgac gatattttgc ttaaaacact cgctcgaatg
     9421 gatacgctat ctaaaaatcg ccataacggc ggagttactg gtgtttctac cgggtttgtt
     9481 gatctcaata aaaaaaccgc agggttacag ccttcggatt taatcattgt ggcagcccgt
     9541 ccttcaatgg ggaaaactac ttttgcaatg aacttatgtg aaaatgcctc attagtggat
     9601 attgaagata aagatgattt agacgaacag ggtaatccga agaaaaaacc ggcaaagcca
     9661 gtgctaattt tcagcctgga gatgccggca gaccaaatta tgatgcgtat gcttgcctca
     9721 ctttctcggg tcgatcaaac caagatccga accggtcaga tttcagatga tgaagacact
     9781 gctaaaatct ccagcacaat ggcaatttta caagaacgta ataatatcta tattgatgat
     9841 agctccggtt taacaccgac cgaattacgt tctcgagcga gacggattta tcgtgaaaat
     9901 ggcggattaa gcttgattat ggtggactat ctccaattaa tgcgagcgcc gggatttgca
     9961 gataatcgta ctttagaaat cgcagaaatt tcccgttctt taaaggcact agcgaaagaa
    10021 ttagaagtgc cagtagtcgc tctttctcag ctaaaccgga gtttggaaca acgtgccgat
    10081 aaacgtccgg taaactcgga tttgcgtgag tcaggttcta ttgagcaaga tgcagactta
    10141 attatgttta tttatcgtga tgaggtctat aacgacaatt ccgatctgaa aggcattgcg
    10201 gaaattatta tcggaaaaca acgtaacggc ccgattggtc gggtgcgttt aacgttccaa
    10261 gggcagtatt cccgttttga taattacaca ggagggcatt atgatgatga atactaaacc
    10321 aacccagcca atcacacttt gtgcgattta tcgcagtaag gcaaaagaag gaatgtattt
    10381 atatgtgcct aagcgtgacc aatttgagca agtgccggaa acattacgcc agttatttgg
    10441 taagcctgaa tttgtgatga tgtttaattt aaccggtgaa aagccattgg tgcgtgctaa
    10501 aaacgaagaa gtgttacaat tacttataga gcaaggctac tatttgcaaa tgccacctcc
    10561 gccggagaat ttgcataaag cctttatcgc acaacagaaa ggggaaaaat aatgcgctgc
    10621 ccattttgtt ccactgaaga aactaaagtg atcgattcac ggcttgcagc aagcggttat
    10681 caaattcgcc gccgccgtga atgtataagc tgtaaagaac gttttactac ctttgaatcg
    10741 gccgaattag ttgtgcctta tgtgatcaaa aataatggta gccgagagcc gtttgatgcc
    10801 gaaaaattaa gaacagggtt aagacgtgca ttaaataaac gccctgtcag tgctgatgat
    10861 gtcgaaaaag caattagcca aatcattatt cagctgcaag cgatgggcga acgagaagtg
    10921 ccgagtcgcc atatcggtac attggcaatg aacgcactta aacaattaga caaagtagca
    10981 tatatccgct ttgcctctat ttatttaagc tttagtgata ttgaagagtt cattaaagaa
    11041 attgaaaaat taaaagagta gttgcaaaaa aacataaaaa aatgaccgct tgtgagttta
    11101 aaatccacaa gcggtcattt ttctttaaaa atactcaatt agcttttact tgttccaaca
    11161 caaaccctac aaacgcccgc acaatgctag acggataacg atgggcggca taaatcatcg
    11221 tcaaatcaaa tttggggttt tctgtctcac ccaagacttc caccaagcca ttttctgcca
    11281 ccaatctatc caccgtgctg tcggcaagca gagccactgc tttttgccat atattcaatg
    11341 gcatagctgt cattgctgga aaaaagatag ggaatttcta ccgcttgtct gccagtgcct
    11401 agcgtgatga cgcttgcttc attttttgcc caagcggcaa tggggaaatt tttcaaatct
    11461 ttgacggtgc tgggcgtgcc aaagcgtgcc aaaaatttag ggtgtgccac ccatttactg
    11521 ccgatttgcc ccactttttt ggcgataaac tgttcgccgt gtagttgccc aatccgaaac
    11581 gccacatcaa tgccatctgc cgacaaatcc aaaagacggt cggtcagcgt gcaatgcact
    11641 tgtacttgtg gataagctgc ctgaaaatca gctatccacg ccaaaacagg ctcgcaggca
    11701 gggcttgccg acaggcgtaa tttacccttt aaattgcctt gctcttcaaa caacacttct
    11761 ttggcagtgg caagctgttc aatggacaaa tgcacctgtt catacaggcg ttgccctgcc
    11821 attgtgggtt taacgcctga tttttggcgg tcaaagagtt gaatgttaag ctctttttcc
    11881 aaatcggcaa tttgacggct aatggttgca atcggcacat tgagtcgctc ggaggctttg
    11941 gagagactgc cgtgctggat aacggcgaca aagaggcgga gggtgttgag gttcattgtt
    12001 tttctcccca atgttcaatt tcttgaataa aatgtttaat actgccttgg acttgttgat
    12061 ttttaccata tagataataa acgcctgaaa gttcttgtaa aaatttactt tctttataag
    12121 cgtgtttttc acccaacaca gtccaaacta actttaactt atgctctttt aaaaaatcca
    12181 aaaatttgtc ttttttaacc agtaagctat tttgaaattt ttcatttatc tctggattaa
    12241 agcaaaccaa attattttgt aaatcaaccc aataaccatc tttaatcgca tttttcattt
    12301 tcattccgtg ataaagcata ggaattggcg cataaaatga aatgccgtca ttgccataag
    12361 tagattccca agtgtgagaa tcgacactag gtattacctt aaatgaaggc gatttatttt
    12421 ccctatgtcg ataaatttct tgccactcat ttaatgtatt ttcggcaaaa aattgatgaa
    12481 tattcattcc atagtgttca ttaccttctg gcatccatct ttccataaaa tcttgttgtg
    12541 ccaaccaatt ttttgctttt gaaaattgag attctttaac taaataactt ctaatttgta
    12601 accacatttg cctatcataa gtttcttttt gcccaaattt tgctaattca cgaaaatcat
    12661 cgtgtctttc tagaacaagc cactgttcat cattaatcgt tacttccaaa agattactaa
    12721 catcaggaaa atcatttatt tttacccaat catcaattaa ttcatcattt tgaatggtaa
    12781 aatagtgttt tgttttacat tgtttttgat ttatgtattg aaaaaataca tctgttttag
    12841 ttggcggtac aattttaatt tgggttttgg gtagataaaa gttgtccaaa ttagtaatat
    12901 attcaagccc tatttcatcg gcatagcgat tagaaaaagt aggaaaatta tccatcaccc
    12961 ttgccaagat ttcatacaaa gccaaccatt gatatttctt gccaattcgc tcaattttat
    13021 tagtatcatc tcttcgccaa tatcttgaac gagtttcttt atcaaactca aggtgcttct
    13081 tgtcatcata gccaaattgc tcaaaaatca tttggcaagc ataattactt aataaatcaa
    13141 cattgatgag attgccgaat ttataactct cccaatttcg gaatttggct tcaaaagtat
    13201 atctgccaaa atcaccatat ccacacatac cacgaccata ttcagttgtc attgaacgga
    13261 taatgattct ttgtccatca gaatgatatt ttttatcaat ttcttcattg gttggtaagt
    13321 tttggggaaa tgaacttcta taaggtggcg taattctttc tctgattatc tcaatatcat
    13381 ctgatgaata ttcatctttt tgcaaagagt attcaataat atggcgagca taatcacgaa
    13441 ccaaaacatt gggataaatt tcttctgttt caggttgatt aaatatttga ttatctatct
    13501 ctaatgcaag tgcttttaag ccagatgaat tttcagaata agcaacagct ccgtgaatgg
    13561 cagataaaat accttccata acataagggt cattaacctc tataaattcc ttgaataacg
    13621 ccaatgcaat ttccaatcta ttccataata aatgagccag tgcattaata tagccatttc
    13681 tacttcgttt atcggtagaa gtaaatagcc aactaacagc aattgcaccc aataatagtg
    13741 cttcgggttc aatattttct tgaccacttg atttctgaca ccaagttagt aatcgttcaa
    13801 ttgctgggca ttgatcagac tccaaagcaa taaaagctgt ccaaatctca tctctatctg
    13861 ccaaagaaaa agaataaagt ttgttatgta aatattttat atttaatggg tggttaattt
    13921 cggtagccag ttgatataaa atattaatcc aagttgcttg attaaaatat ggactatttt
    13981 tgaaaaattg atgtagtttt tgcatattga ttttttcagg ctgcctccaa aagagatttt
    14041 ctacaataat ctcaaaccaa gaccattcct ttgaataatc aatcacttca aatacttcaa
    14101 aatcaaatcg ttctggcaac aatacactta atgcttccca tacgccctta tcatagccaa
    14161 ctctactata tagcttt
//
LOCUS       DANLTI010000071        13951 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.071, whole genome shotgun sequence.
ACCESSION   DANLTI010000071 DANLTI010000000
VERSION     DANLTI010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13951
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.071"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            2..214
                     /locus_tag="PXB09_001617"
     CDS             2..214
                     /locus_tag="PXB09_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5233725.1"
                     /translation="MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYL
                     LKIEAATNGQVTIREICEELGNATAK"
     gene            complement(313..558)
                     /locus_tag="PXB09_001618"
     CDS             complement(313..558)
                     /locus_tag="PXB09_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233726.1"
                     /translation="MNTEDQIIELTVEVENLRHQLNAKNIILDDLKGRLTDYQRKRLD
                     RLFERSRRQYLNDLDLEEEQAEALEAICNELESFLAN"
     gene            691..963
                     /locus_tag="PXB09_001619"
     CDS             691..963
                     /locus_tag="PXB09_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233727.1"
                     /translation="MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQ
                     SQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD"
     gene            1046..1378
                     /locus_tag="PXB09_001620"
     CDS             1046..1378
                     /locus_tag="PXB09_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233728.1"
                     /translation="MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLA
                     DEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKK
                     VLGSKGNP"
     gene            1391..1684
                     /locus_tag="PXB09_001621"
     CDS             1391..1684
                     /locus_tag="PXB09_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233729.1"
                     /translation="MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAF
                     LQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD"
     gene            1836..2078
                     /locus_tag="PXB09_001622"
     CDS             1836..2078
                     /locus_tag="PXB09_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233730.1"
                     /translation="MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIA
                     YMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR"
     gene            2075..2407
                     /locus_tag="PXB09_001623"
     CDS             2075..2407
                     /locus_tag="PXB09_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233731.1"
                     /translation="MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERV
                     VLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCL
                     TYNGTFIK"
     gene            2404..4764
                     /locus_tag="PXB09_001624"
     CDS             2404..4764
                     /locus_tag="PXB09_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDL5233732.1"
                     /translation="MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQ
                     PYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKA
                     EMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQD
                     AEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIE
                     QNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMT
                     CEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMII
                     ANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSK
                     YHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADAT
                     PHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVK
                     YVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRR
                     LGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALY
                     TMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEV
                     KRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRV
                     TEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN"
     gene            4777..5109
                     /locus_tag="PXB09_001625"
     CDS             4777..5109
                     /locus_tag="PXB09_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233733.1"
                     /translation="MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFRE
                     GEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEM
                     KLGLLEAK"
     gene            5109..5561
                     /gene="ssb"
                     /locus_tag="PXB09_001626"
     CDS             5109..5561
                     /gene="ssb"
                     /locus_tag="PXB09_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5233734.1"
                     /translation="MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVK
                     KESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQM
                     QMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF"
     gene            5572..5904
                     /locus_tag="PXB09_001627"
     CDS             5572..5904
                     /locus_tag="PXB09_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233735.1"
                     /translation="MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFD
                     DVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAV
                     LGGKLNEK"
     gene            5894..6163
                     /locus_tag="PXB09_001628"
     CDS             5894..6163
                     /locus_tag="PXB09_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233736.1"
                     /translation="MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEES
                     GLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ"
     gene            6138..6428
                     /locus_tag="PXB09_001629"
     CDS             6138..6428
                     /locus_tag="PXB09_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233737.1"
                     /translation="MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAY
                     FGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK"
     gene            complement(6698..6880)
                     /locus_tag="PXB09_001630"
     CDS             complement(6698..6880)
                     /locus_tag="PXB09_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDL5233738.1"
                     /translation="MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQ
                     NQLIIQAIQQFKQNNP"
     gene            complement(7158..8156)
                     /locus_tag="PXB09_001631"
     CDS             complement(7158..8156)
                     /locus_tag="PXB09_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5233739.1"
                     /translation="MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQID
                     AGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHL
                     RQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYS
                     DEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTA
                     FLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANL
                     HNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ"
     gene            complement(8384..8460)
                     /locus_tag="PXB09_001632"
     tRNA            complement(8384..8460)
                     /locus_tag="PXB09_001632"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8424..8426),aa:Val,seq:gac)
     gene            complement(8524..9324)
                     /gene="apaH"
                     /locus_tag="PXB09_001633"
     CDS             complement(8524..9324)
                     /gene="apaH"
                     /locus_tag="PXB09_001633"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDL5233740.1"
                     /translation="MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGED
                     SLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQP
                     LVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWS
                     EDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKN
                     IIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK"
     gene            complement(9416..11392)
                     /locus_tag="PXB09_001634"
     CDS             complement(9416..11392)
                     /locus_tag="PXB09_001634"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDL5233741.1"
                     /translation="MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYF
                     IPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVD
                     HPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAP
                     WWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIK
                     QNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCS
                     LVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQ
                     SEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQ
                     MIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELA
                     ERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYA
                     TWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYA
                     RYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELA
                     LYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII"
     gene            11552..11830
                     /locus_tag="PXB09_001635"
     CDS             11552..11830
                     /locus_tag="PXB09_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000738492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5233742.1"
                     /translation="MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQ
                     KQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN"
     gene            11855..12151
                     /locus_tag="PXB09_001636"
     CDS             11855..12151
                     /locus_tag="PXB09_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5233743.1"
                     /translation="MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFF
                     IGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK"
     gene            complement(12204..12995)
                     /locus_tag="PXB09_001637"
     CDS             complement(12204..12995)
                     /locus_tag="PXB09_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5233744.1"
                     /translation="MGILTGKRILVTGLASNRSIAYGIANAMKQQGAELAFTYLNDKL
                     KPRVEEFAKEFGSDIVLPLDVATDESITECFTELSKHWEKFDGFVHAIAFAPGDQLDG
                     DYVNAATREGYRIAHDISAYSFVAMAQAARPFLNENAALLTLSYLGAERAIPNYNVMC
                     LAKASLEAATRVMAADLGKEGIRVNAISAGPIRTLAASGIKNFKKMLSAFEKTAALRR
                     TVTIDDVGNSAAFLCSDLASGVTGEVLHVDAGFSVMAMGELGDEE"
     gene            complement(13139..13912)
                     /locus_tag="PXB09_001638"
     CDS             complement(13139..13912)
                     /locus_tag="PXB09_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HDL5233745.1"
                     /translation="MKIVSEPKTSGRHTCTIHCQNCSISQLCLPFTLNETELTQLDNI
                     IERKKPIQKSQVIFKLGDELRSLYAIRSGTLKAYTLSESGEEQITGFHLPGDLIGFDA
                     ITNMQHEGYAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEIKSDQEMILLL
                     SKMNAEEKLAAFLYNLSQRYSARGFSAKEFRLTMTRGDIGNYLGLTIETISRLLGRFQ
                     KSGMISVQGKYIIINRMEELAELAGAIKPQQNIIAQTTA"
BASE COUNT         4187 a         2494 c         3143 g         4127 t
ORIGIN      
        1 tatgactaat aagaaaattc agaaagctat tgaacttgta ggaacacaaa caaaattagc
       61 tgaagcttgt ggagttagtc agcctacggt cttgaaatgg ctaaacggag gcggaatttc
      121 cgctgaatat ctactaaaaa tcgaagctgc cacaaacggg caggtaacaa ttcgtgaaat
      181 ttgtgaggag ttgggaaatg caacagcaaa ataaaagccc tgaacaggca gggctagcga
      241 gtgggaaatt tactgtaaga cgtaatcaag acggtaaatg gcgtttagat ttgaccttgt
      301 tggattttgg tattagttcg ccagaaacga ctcaagctcg ttgcaaattg cttcaagagc
      361 ttcagcttgc tcttcttcaa ggtcaaggtc atttaaatac tgtcggcgtg aacgttcgaa
      421 aagccggtcc agtcgtttgc gttggtagtc tgttaagcga ccttttaaat catcaagaat
      481 aatgtttttg gcgtttagtt gatggcgtaa gttttcaact tcaacagtca gttcaataat
      541 ttgatcttca gtattcataa aatttccttt tggagggtta aacaatatct aaaacataac
      601 caaaattcga ctgcttgtct atggggatag ataagccgaa atcaacgtaa agaatgttaa
      661 tagagccttg gggaaggcgt aggggaaata atgaatttag accacacctg tacaaattgc
      721 aaaagtaaaa atttacgggt tcgtacatct gaaaaaatcg gtttgctgac tattcaggct
      781 gttacttatt gtaataactg cggcacagag caacttgtgc aaagtcaaat tatccgtgtt
      841 cgcacaccga tttataaaga gcgaccggaa gcaatgcgta ttaataaatg cttgatggaa
      901 gccgatttga acacgccgga tttgttcgat ggcgttgtgg cagaccaacc taagcaagac
      961 taatcccaat ttttaaacaa tcgtcaaaat aagccttatt tgcatagggc gagatttttg
     1021 caccctaaat tcaggaattt gaacaatgag taagcaatta tattaccgac acaaatcacg
     1081 ttggaacaga cttaaccgcc ttaagaagat gaataaacgt cgccttaatc tgtttttgca
     1141 agaaaagcgg gtggcgaatt tagaaagccg gttagctgat gaagtagagc tggcaaagct
     1201 gaatagtgag cagattggcg atttactgca agcgttggag ttaaaagtga atcggttaat
     1261 tcgccaaaat gaaaagctga aagcccgtgt gattaagctg gaaaaagtca aacagaccca
     1321 aaagcaaggt ttgtttgcaa tgtttaaaaa ggtgttgggt agcaagggta atccttagta
     1381 agaggtagat atggatttcg tggcaacgta tcaaaagata cgcattaaca ctaatcacaa
     1441 gcaatttact tgcaatcact taggcgagat ttgggggaag gaaaacgacg attttaaacg
     1501 tttcttacta cgagtcgcat tcttgcagga taaccccgag ccgaaacctt ggggagcgta
     1561 ttccccacaa gaaaaacgcc ttttacatag ttttagcttg tggttagagc agatagcaga
     1621 ttttcagcga gtaatgaaaa gagaatcaaa actgcgtgaa aaacatatta acgcaccgga
     1681 ttagaaggag taaatatgag ccgtaaccgt gaattgtgtg agttttttca caaactgtgg
     1741 tgcaaaaccg gtaatcgcta tgcttatcgc cggtatcaag tgttttttca gcgttatcaa
     1801 aacgaatgtt tagtgaatga gtagagggta gaaaaatgtc attaattact gtgaacgatt
     1861 acaaaatcaa gaaagatatt ttagatgcag acggcaagcc gtgttatcag ttgtatcaag
     1921 gcgaagagct attgcgtgat accaccaatt taagcgaaat catcgcttat atgtttattc
     1981 gtgccgaaga taaaccgttt gatgagttgt ataaccatat catcaaccaa gaagcaggag
     2041 ctaaaacaga tattaaattt acggtaacgg tgagatgagc cagattacta aatccgctta
     2101 cacacatatt cacccaaact ggcaagcccc gagaggtaac acttaccgga ttgagcgata
     2161 tgagctaaaa cggcggtatg ccttattttg taatggtgag agggtagttt tatataaaga
     2221 cccaacacac cccaataaga acgtagagag ccatatagaa agtgatgttt tgttgttatg
     2281 gctactgaaa aatgaattag ggtggagcgg taatattaaa gagccgttaa gccctcaaga
     2341 tgttgagaat atccgcttgt tagagcaagc attttgttta acttataacg gaactttcat
     2401 taaatgaatt atcagaatga gattctatct gctacagagg ctttcgcaat aggtgtttca
     2461 ctcccacctg ttgccggtgc ttctgcttgt gcattagagc ttcattctga tcgtttatat
     2521 caagcgttca aacagcctta cacttcaatg gtccagcaag aattattctc gaaagaccct
     2581 attcacgaac cgttacgcca atcttatttt gagcgtttgc ctcgtgcctt agcagagcat
     2641 ttcggcagac agtataagca aaagctacat taccaaagcc aatacgacac agcagactgg
     2701 ttcaaagcgg aaatggcacg caaaatgcca cgcattgagg cagttattag ccagtattgc
     2761 gatgtattcg attttctgaa gcaatcccat caagatttag attttttagc tgaattagat
     2821 agtaatgttt atttcggtgc cggtgttgat acgcaacaag cggtacaaaa aattaaacaa
     2881 gatgccgaag tgaaaggtat tcaactgcct atgcaccttt gccgtttaga gaatagctct
     2941 cgctatttaa aagctcacgg cattcgcccg cttgcttacc aaaccgaaga gcaaatcaaa
     3001 cagcttgcct taggtattgc ttatcgtgtt cgccaaattc agcaagataa catcgagcag
     3061 aatatgcaca aagcgacaga tggcgacaca gcctatagtg tgttgcttga atgctatcgg
     3121 gcaatgatgg gagaggtaaa taagctcaag attgattcgc cttatcagaa aaaagcgaga
     3181 aagggtagat taactgaaga ggaaattacc acaggctttt taaaaatgac ctgtgaaaaa
     3241 tggtggacta gaaagttatc taaaattgcc gaacagatga aagagcattt agctattgcg
     3301 tgcggtatgg tgaatatgct ttcgccttac tgttcaaatg ctcgcttgaa agcgtttgag
     3361 gctcaacgca aggcgaatat tgattatttg aaatcaatga tcattgccaa tatcgccgag
     3421 ccggaagagc aactttcatt atttgaaacg tggttgaagt ctgcctctaa cccgaaaatt
     3481 aaacgccttg aattactcac tcgtatgaat ggatttgagc gttatgcaga taagcaaggg
     3541 cacgaggggt ggtttattac cttgactgct ccgtctaagt atcacgcaat gctttcaaga
     3601 accagtagcg tgaacccgaa atggaatgga gcaagccctg cggaaacaca ggtttacctt
     3661 gtgaatactt gggcgaaaat ccgtgccaaa ctcaaccgtg agggcgtaat ggcttacggt
     3721 tttcgagtgg ctgaacctca cgctgacgct accccacact ggcatttaat tctattcact
     3781 cgtccggaag atatggaaaa gcttcgccgc gtgttcttga gttatgcctt agaggtcgat
     3841 ggcacagaag ccggtgcgaa aaaataccgt tgcaaattca agcgtattga gaaagagaaa
     3901 ggctcggcaa cgggctattt agtgaaatat gtttctaaaa acattgacgg ttttggaatg
     3961 gacggcgagc tttcagacga ggcaaatatt caggcgaaag agaatgccgc tcgtgtagga
     4021 gcgtggtcta gcgtttggtg tattcgacag ttccagcagt taggtaatat tccgatcagc
     4081 ttatggcgtg agttacgccg tttggggagt gtagagcaag aagatgaaac tttagagaaa
     4141 ctccgtgtga ttgcagatag cggtgagtgg gacgttttca ccgaagaatt aggcggtgcg
     4201 ttggttaaac gtgccgattt agttgcacgt attacttata ccgaacgcaa aagcgaaacc
     4261 ggtgaggcgt tatatacgat gtatcaagag ccatcattaa aagtgagcgg cattattaac
     4321 attaaaaacg gtgtgcagat taatacacgc ccgaaagagt ggagcattca acttaaacct
     4381 aaaaactggg aggagcaaca attacagaaa aaattagaaa atgcaaccga aacggaacga
     4441 gcggaggtta aacgtaaata ctacgagaag ttagggttta acgaagaggc tatcgcttta
     4501 ttaggggagc ttgctccccc ttggacttgt gtcagtaact gtacggggtc aaaaaataat
     4561 cagattagtg aagaggctcg aaattgccta agaaatgaac tgattacaat gcgaggacgg
     4621 gttactgaac atcaaataga cgatttacta aacggcaagc ggttaaaaat ttggggaaat
     4681 tcgcaaaaaa caatgtttgt gagttatagc cgtgggcgtt taattgagca tattgttgat
     4741 aattatgaga gttttttgaa ttaggatatt aagaaaatgg ttaaatttat tcgtttaaat
     4801 ttgattaatt atttcattga gaaagatgaa tatggagaac cggtgcgttg cagagcgttt
     4861 cgttatgatg agattattca aactaagttt attgaaggat ttcgagaggg agagatacca
     4921 gctgatgatt atggatttga agattggaat ggttcggttc tgattttaaa tgaagaagga
     4981 cgtaaatatt ttgagaacta tctttttgat gtaaagaaga attattgtag agcaagggat
     5041 aactatgtat atgtcttgga aactttagac gaaattgaaa tgaagttagg attattggag
     5101 gcgaaataat gaacttagtc acattagtcg gacgtttggg gcaagaccct gatattagaa
     5161 caatgcaaaa tggtgagaaa gctgcggctt tatcggtagc gacctctgaa aagtggacag
     5221 ataagcaaac aggtgtgaag aaagaaagca ccgaatggca tagggtggtg ctttatcgcc
     5281 gattagctga aatcgccgaa ttgtatgtaa aaaaagggca tttggtatca attatcggga
     5341 aaattaaaac ccgaaaatgg acggatagca acggtgttga gcggagtatt acagagatta
     5401 ttgccgagca gatgcaaatg ctcagtagtg gtgagaaaaa tacgccaaat acgccaaata
     5461 aggcagaaaa taaaccgcaa ccaaagcaga aaaatcaaga cgtgatgact gcggacgagc
     5521 agaaagatat tccgcagttt gatgatgata ttccgtttta gggggtgaat aatgagagaa
     5581 tgggaaaaac aaatgccatt tagtgcaaat ttacatataa gacctacagg aaaatttgaa
     5641 gtgaaaaatg taaacataga acaaataatc ggagaacgtg gcaaaaatta cggcaacttt
     5701 gatgatgttg ccacaatgag ccagcagtta aaagcagtgt tgctggatac caatactcaa
     5761 cttaaaccac atcaaaaaga ggcaggcgag atgatctgct tgaaactggc tcgcattttt
     5821 gcaggttgta atccggacta tgaagataac tggcgagata ttgcgggtta tgcggtgctg
     5881 ggagggaaat taaatgaaaa ataaaatggg gagtaaattt atacgagtca gagttgagca
     5941 tccacagcgg aaaaaagaag atattgagct tgtgcaggat gtggttgctt atcatatttt
     6001 taatcttttt aaatttgagg aaagtgggtt acgggggttt agtcagtatg atttggaaat
     6061 tgatgtgaaa gttaagccag tgttagaaca aaaagaaatg cctgtagatg tttggattga
     6121 tgatttaggt ggtaaaaatg gaacaattac aagcggtcag taatgagcaa gtttttgcaa
     6181 aactttgtga ggttgagcgg ttattaaaaa ccaaaggggt gaatgagcat agccgtgaat
     6241 tgtgggattt gggcgatgta gcagcatatt tcggctacac taaagaacac accagccgaa
     6301 gtgttgtatc tagtccacat tttccgaaac cgattgccct tgacggctta cgaggcaagg
     6361 gcaggggggc gaagaagtgg gtatccggtg aagtggtgaa attttgtttg atgtggaagg
     6421 tgaagtgatg ataaaaaaga taattttaga tgcttgttgc ggtagccgaa tgtttcactt
     6481 taataagcac aacccctcgg tattgtttgc tgacaatcgg gaatccctgt atcgaaaatt
     6541 ttaaatgtta tcgaatacca acctatctat gggcataaaa gcggtaaaca taacaaaacg
     6601 cattggctgg catttgtaaa gatggataat aacgattatt tgtaaagtat ttcaaaatac
     6661 aaaagccgat aaatttcatt atttatcggc ttttgtttta tgggttgttt tgcttgaatt
     6721 gttgaatagc ttgaataatc agctggtttt gtggaatgtt gagtttttgg ctaagtactt
     6781 cgatttctgc gatcacctca agcggtagtt taaaggattt ttgctttatt cctcgttttg
     6841 cctcgctttt agcttggatt tcatttcttg acattgccat aatttatccc tattataaat
     6901 tttgttgaag agctgggagc tttcaccccc agcgagttgc ttcagattag taagctgggg
     6961 agctaaggac taataagaag acaactagga taatgtattt aaacattgtg ctatccttct
     7021 tcatttcgta aggtttaagc cttacgctca ctttcaagct gtctcttgaa agtgaggtta
     7081 ttataatgta gggtatccta cattgcaagt aataaataca aaaaagccga taaattttcg
     7141 tttatcggct tttgttttta ttgcagtttg ctcacaagtt ctgaaatatc cgggttatag
     7201 taggtatttt gcaaaatact taaatctcga tgccccgata ctttggcaag ctccattacc
     7261 gtcagatatt tagacaaacg tgtgagtgcc tctcgccgtg tgtcgtgaaa atgcagatcg
     7321 gcattgtgta gattggcttt ttgtttcagc ttgcgaaaat tcgaatcaag gctgcgactg
     7381 gtgagctgga aaacactgtt ttgcttgttc ggttcaagtt gtgccaactg atttaaaatt
     7441 gctattgctt tggttgagag tggcacggtg cgtgaataac cgtttttggt ttgtggcaaa
     7501 aatgcggtgc gtgcctgcag gtttatatgt tcccatttta aaccagcaat ttcacccgct
     7561 cgcattgcag tctcaatcgc aaataatagt gctgctccgg ctctttgttg cattaatagc
     7621 ggtggctggt tagggctgta gccggagaca aaaatcagtt tgtctatctc ctcatcgcta
     7681 tatcggcgag ttcttgctgg tggcgttttg attttttcca gcgtttttag aggattttct
     7741 ttgagataat cccattccat tgcttttgta aagagtgccg ataaagtggc tctttctctt
     7801 gagacggaaa ccggctgcac ttcttgcaag cgttggtttt gccattggcg taaatgctct
     7861 ttggtgagtg ccggtaatgg tatatttccc aagttgctgc cggcaattct tagcaggcga
     7921 tagcgttctt cccttttgcc acgtttggtc ggagtgacct ctttgaggta tttgtcgatt
     7981 aattcggcaa aaagaatgtt cggggtggtg ttatattctc cggcatcaat ttgagcctct
     8041 aaagcgtaag cccagcggtt tgcctctgtt ttggtgctga aagtggcagt tttataaatg
     8101 ccttttttgc ggacttgtgc tcggtatttg ttgccgttct taataatagt agccattttt
     8161 ttattccttt gtgtatgtgt gcagtttaag tgtgcaaatg tgtgcaaagg aatgttaata
     8221 gagatcataa acgatcaata aatatcaagt tttcatatca aaaatgatgt ttttattgat
     8281 gttatgctac acttggggaa gtgttttaaa tcaataagct attgatttat aaggggtatt
     8341 tttggggtta agcctgaatg gggatattca ggcttaaaaa taatggtgcg actagctgga
     8401 ctcgaaccag tgacccccac catgtcaagg tggtgctcta accaactgag ctatagtcgc
     8461 attaacggtg tgcattctat tggaaaaagg aacttagtgc aatatgcttt tggtcgaatg
     8521 cttttatttt agacgctttt gggtaaaaat ttgtttatct tcccaacgga gcatggttaa
     8581 atggcttccc caagcacagc cggtatcaag tgcatagatg tttggacgag tgcatttgcc
     8641 cattaggctt gcccagtgac caaagataat gtttttctgt gtaaataacg gattatctaa
     8701 gtcaaaccaa gccagcagtt cttgaggggc ttgttcaagc ggtaatttac agtcaaaatc
     8761 taaccgcttg tcggtgtagc aaaaccgcat acgggtaaac acattgatga tataacgcca
     8821 acgttcaaca ccttgcaaat cttcactcca gcgttcgggc ttattctcat acatttgggc
     8881 gatgtagtcc gcataattgt cactttgtag caccttttct gcctctttgg cacaagctag
     8941 ggtagttgct aaatcccact cagggctgat tcctgcgtga gtcagcaaaa attgatgttt
     9001 ggggtgatga attacaagcg gttgatttct gagccaattt tgcaaatcga gccgatcttt
     9061 agcctcaaaa atagcatcaa tcttatcatt tggttttacc cgtttgatgc caagcaagtg
     9121 caaatcgtgg ttgcctagca cggttttggc attgtttgca gagtctttca caaaacgtaa
     9181 acaggctaaa gagtcctcac cacgggcgac taaatcccct gttaaaaaga gttcgtcttg
     9241 cttggggtta taattgactt tttctaataa aagctgaaat tcgttaaagc aaccgtgtag
     9301 gtcgcctaca atataagttg ccattgtttc tcctttgttc ccctaaagtt ataaacaagc
     9361 ggttatattt tagagaaaat ttgcaaaatc tcatcaaaat ataaccgctt gaaatttaaa
     9421 tgatatttcc tacgattgag cgggtttcta agcgtacttc ggtgagtttc actttcaccg
     9481 cttgcccgat ctgataggct ttttcacctt taatataaag tgcaagttct tcttggcggt
     9541 attccatttc ctctttgttg tcgtgcaagc tggagaatgg cacaaaaatt tgagcaccgt
     9601 tttttatgac tttcgcacgc aagccaccac gggaaacatc tgcaatttcg cactcaaatt
     9661 cgaccgcttg ttccaccatt ggggcaaggt aacgagcata aagccagtca gcaatatcac
     9721 gttctactaa acggttttga cggcgagctt cttgtaaacg gcttaaaact gattcttcca
     9781 ccgcttggct ttgtttgcca agtaacactt gcttgattaa acggtggttt accatatcgc
     9841 catatttacg gatgggtgat gtccaagtgg cgtaatcggt aatgcctagt ccgaaatgcg
     9901 gggcaacttc ggctttaaat tcagcgaagg ttaaataacg tcgtaaacgc aactctaaga
     9961 atttctctgg gtagtcttga atatcacgtt gcatttggca atagccttct aaggttgcta
    10021 aacgctcggc ggagtagcgt tcggcaagct catcacgatt ttcatcgctg gctaaagttt
    10081 ggagtaaaaa tgattttacc aattcataat ttttcggatc aaaacctgaa tgggtattaa
    10141 atacaccggt tttggcatgt tggcttaaga attttgcaca acaaatattg gcaagaatca
    10201 ttgattcttc gatcatttga ttcgcaatac ggcgatattc aacgtgaata tcttttaccg
    10261 agccatcttc atttaactca aaggtataat cgccttgttc tttgaatagc aacgcattct
    10321 cggcacgcca ttgaatgcgg gcttgagtaa attgatgtag ccactcaatt tgttgttttg
    10381 tttcttcaga ctgaggttgc cacgcatttt ccacgccttc gagataatcg gaaacatcgt
    10441 cgtaagccaa gcgatctttt gattcgaccc aagcagaggt aaaggttgtc tctttaatga
    10501 gattgccgtt taaatcggtt tcaataaagc caacgagggc agggcgtttt tcattcggga
    10561 caagcgaaca gagatcgtct gagagttctc gaggtaacat tggaatgtta aagcccggca
    10621 aatagttggt gaaacaacgc tggcgagcgg ctttttcaat atgggaattt tctgggatat
    10681 aagcggttgg gtcagcaatc gctaccacta aacgccagcc ggttcgcttg ccattttgct
    10741 taattggttc gatgaacaga gcatcgtcca tatcttgcgt gcttgggctg tcaatagtgg
    10801 taaagtaaag atgagataaa tcttcacgag ctaattcatc gtgtaattca tagttttttt
    10861 catttgcgac cggttcacga ggctgttcgt ggcgggcaag tgtgacccac caaggggcaa
    10921 aattatcaga ttctttacag ataaattggg taacttgagc aaagaaaaaa cggtcgtcac
    10981 gcaatgggtg cgtttttaat tgtgcaacca cccagtcgcc attttctaat ttttcagtgg
    11041 cttttttatg ggtatttgcc gggatagttt gcttaatgct tgggtgatca accgcaagtt
    11101 gcaatttgcc ctctttattc aagcgaactt gggcaataaa tctatccagc attggctcaa
    11161 gtagtgaatc aatttctacc tgttctttgt cgccatcacg tttgactacg gctttcactg
    11221 aatcaccgtg cattactttt ttcatttccg caggtggaat aaaatagctt tttttatcgc
    11281 attctaaaaa accgaatgct ttgtctgagg ctttgacaac gcctgcgaca tattctttgc
    11341 ttgcttcaat ttgttgtttg agttgggcta aaaggggatt gttttgaaac ataatttctc
    11401 attttaaaaa taaaaaaagg tgctatcgtt gcaccgaaaa aaacaatggc attataacgg
    11461 atttgaacca agttcagcaa ataaatgctg ttgctataac ttataaaggt tggtagaata
    11521 taatccattt aaaaataatg gagacttttc aatgaaaaaa ttacttgcaa ttgcaacagt
    11581 attttcttta gcagcctgtt ctactcaaac acttgaacta tctcctgcta aggaagctca
    11641 atatgatcgt gttcaacact tctttgtttc agggcttgct caaaaacaag agatagatgc
    11701 agcaaaaatt tgtaatggtg cagataaggt aggtaaggta gaaactgaaa ctactttctt
    11761 taatggcttg ttaggtacaa ttacttatgg tatctattca cctcgccaaa tccgtgtata
    11821 ttgtaactaa tcctagtaat ttaaggagtt gaaaatgaaa aaattgcttg ctatgtctgt
    11881 attaacagcc ctgctgacta cagcatgtac aacacaaact gcccatattg gcggcaaagt
    11941 tactgataat attaaaccaa ctaagagtgt aactcagtcg ttctttatag gtgggattgg
    12001 gcaagaagaa acattgaatg ttgtagaggt ttgtggttcc aaagataaag tgcagcaggt
    12061 tgaaacagta ctttcaggtg gggacattct attaggtctt gtgactatcg gtatttatac
    12121 acctcgtact gcaaatgtat attgtaagta atattttatt aaaaaaataa cggactcaat
    12181 tgagtccgtt atttttatag gaattactct tcgtcgccta attcacccat tgccattacg
    12241 ctgaagccgg catcaacgtg taacacttca cctgttacac cagaggctaa atctgagcat
    12301 aagaaagctg cagagttacc tacatcatca atagttacgg tgcggcgtaa agcagcggtt
    12361 ttctcgaaag cagaaagcat tttcttgaag tttttaatgc ctgaagcagc taatgtacgg
    12421 atcgggccgg ctgaaatcgc atttacacga ataccttctt tacctaaatc ggctgccatt
    12481 acacgggttg cagcttctaa agaggctttg gctaagcaca ttacattgta gttggggatt
    12541 gcacgctctg cacctaagta acttaaggtt aaaagggcgg cattttcatt taagaagggg
    12601 cgagcagctt gagccattgc aacaaagcta taggcactga tgtcgtgtgc aatacgataa
    12661 ccttcacggg ttgcggcatt tacataatcg ccgtctaatt gatcgcccgg tgcaaatgcg
    12721 atagcgtgaa caaaaccgtc aaatttttcc caatgtttgc ttaattcagt aaagcactca
    12781 gtaatgcttt catcggttgc tacatctaac ggaaggacaa tgtctgagcc aaattctttg
    12841 gcaaattctt caactcgtgg ttttaattta tcgtttaagt aggtgaatgc aagttctgca
    12901 ccttgttgct tcattgcgtt tgcaataccg taagcgatcg aacggttgct tgctaaacct
    12961 gtcactaaaa tacgtttacc agttaagata cccataaaaa ttcctctttt atattgattg
    13021 gggcaaaatt gtgtcgatta taacggatat aggaaaaacg ggcaaatgga gttagcggct
    13081 catcggatca gaaatccctt tttgaacgag gtttcaaaaa gggatttggt aagataaatt
    13141 aagcggtagt ttgagcaata atattttgct gcggtttgat tgccccggct aattcggcta
    13201 attcttccat acggttaata ataatatatt ttccttgtac tgaaatcata ccgctttttt
    13261 ggaaacgccc taataaacgg ctgatagttt caatggttaa accaagataa ttgccgatat
    13321 ctccacgggt catagttaga cggaactctt ttgcagagaa accacgggct gagtaacgtt
    13381 gggaaagatt atacaaaaat gcagctagtt tttcttccgc attcattttt gagagcaata
    13441 gaatcatttc ttgatcgctt ttaatttcat tactcatcaa acgcataatt tgatggcgaa
    13501 tttttggcat tttgccggca agatcatcta aaatatcgaa tggaatctca caaatcattg
    13561 aggtttcgag tgcttgagca tagccttcgt gctgcatatt ggtaattgca tcaaagccaa
    13621 ttagatcgcc aggtaaatgg aaaccggtaa tttgctcttc accactttca cttaaggtat
    13681 aggcttttaa tgttccagaa cggatagcat aaagcgaacg cagttcatca cctaacttaa
    13741 aaataacttg cgatttttga atcggttttt tacgctcaat aatattatct agttgagtta
    13801 attccgtttc attaagagta aaaggtaagc atagttggct aatactgcaa ttttgacaat
    13861 gaattgtgca agtatgacgt ccgcttgttt taggttctga tacaattttc atccattcaa
    13921 ccttaaatta gaaaagtatt cctaaatttg a
//
LOCUS       DANLTI010000072        13818 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.072, whole genome shotgun sequence.
ACCESSION   DANLTI010000072 DANLTI010000000
VERSION     DANLTI010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13818
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.072"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(62..778)
                     /gene="rph"
                     /locus_tag="PXB09_001639"
     CDS             complement(62..778)
                     /gene="rph"
                     /locus_tag="PXB09_001639"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001261764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDL5233746.1"
                     /translation="MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVE
                     ESVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAKGKQGGRTMEIQRLIARSLRAVV
                     DLKALGERTVTVDCDVIQADGGTRTASITGACVALYDAMNKLVANGTLKTNPMKGLVA
                     AISVGIVAGEAVCDLEYLEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHQELLTLL
                     DLAKQGISQLVEAQRKALAE"
     gene            1059..1922
                     /locus_tag="PXB09_001640"
     CDS             1059..1922
                     /locus_tag="PXB09_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDL5233747.1"
                     /translation="MIYSMTAFAHLEMKKEWGNAVWEIRSVNQRFLETYFRLPEQFRN
                     LEMTLRERLRSALTRGKVECSLRIDLSKTQNSEIALNKEYAAQVVQSLKWLKETANEG
                     EINLVDVLRFPGVVDNESQDLDQIAQDLLAGFEQILADFIAMRAREGENVQALILQRL
                     EAISVEAAKVQAQMPEILQWQKDRLQQRFDELNLQLDPQRLEQEMVLLAQRVDVAEEL
                     DRLQLHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADVTNSAVELKVLI
                     EQMREQIQNLE"
     gene            1931..2821
                     /locus_tag="PXB09_001641"
     CDS             1931..2821
                     /locus_tag="PXB09_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDL5233748.1"
                     /translation="MAMNFKQVSQSYPNLCVPLSQYCLIEIAGVDAEKYLQGQLTCDV
                     AKISVGEHTLTSHCDPKGKMSALLRLYRAENEKFMAIIHRSLLPEALTQLKKYAVFSK
                     VTFTELDTPLYGMAGEAAFAKLSENMTALRLTTGQPRAIVWGEELETTADEQLWTLMD
                     IQDGIPVLLQQNQFELIPQATNLQALESAISFTKGCYIGQETVARAKYRGANKRALFT
                     LAGNFESEISLPEVASAIEMQLGENWRATGTVLTSATDENTLWVQVVLNKDVEPNTKF
                     RANGVALEMVELPYSLAENE"
     gene            complement(2853..3113)
                     /locus_tag="PXB09_001642"
     CDS             complement(2853..3113)
                     /locus_tag="PXB09_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDL5233749.1"
                     /translation="MALLITHKCTNCDMCLPECPNEAISVGDDIYIIDPVLCTECVGH
                     YEKPTCQKVCPITNCIIKDPDNIETEEQLWERFVMIHHPDQI"
     gene            3343..3762
                     /gene="rbsD"
                     /locus_tag="PXB09_001643"
     CDS             3343..3762
                     /gene="rbsD"
                     /locus_tag="PXB09_001643"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDL5233750.1"
                     /translation="MKKTLNLNAQLSHSIATLGHTDSLTVCDAGLPIPNTIERIDLAL
                     TAGVPSFLQTFDVVVSELFVERVLLAEEIKHKNPQVLAALLERLTQLEQTQQNKIQID
                     YVNHEIFKEQTHYSKAVVRSGECSPYANIILYSGVPF"
     gene            3772..5268
                     /gene="rbsA"
                     /locus_tag="PXB09_001644"
     CDS             3772..5268
                     /gene="rbsA"
                     /locus_tag="PXB09_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDL5233751.1"
                     /translation="METLLKMSGIDKEFPGVKALSNACLSVYGGRVMALMGENGAGKS
                     TLMKVLTGIYSKDAGSISYLGKEVTFKGPKDSQEAGISIIHQELNLVGNLTIAENIFL
                     GRESKTAWGAIDWKKMYAEADKLLARLGVKHSSHQLCAELSIGEQQMVEIAKALSFES
                     QVIIMDEPTDALTDTETASLFKVIRELKAENRGIVYISHRLKEIFEICDDVTVLRDGQ
                     FIGERVIADIDEDQLIEMMVGRRLEEQYPHLHQERGELLLEVKNLSGSGVNNVSFQLH
                     KGEIVGISGLMGAGRTELMKVLYGALPKTAGSIELNGKAISNHCPQDGLNNGIVYISE
                     DRKGDGLILGMSVKENMSLTSLDHFSKAGSIRHDAEKLAVDDFIEMFNIKTPSREQQI
                     GLLSGGNQQKVAIAKGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKDGLSILMV
                     SSDMPEVLGMSDRILVMHEGQISAEFSRAEATQEKLLAAAIGKSTGLN"
     gene            5278..6246
                     /gene="rbsC"
                     /locus_tag="PXB09_001645"
     CDS             5278..6246
                     /gene="rbsC"
                     /locus_tag="PXB09_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDL5233752.1"
                     /translation="MATQTKQFQLGRFLIEQRSFVALFILIVSVSMINPDFFSVDNIL
                     NILRQTSVNAIIAVGMTFVILIAGIDLSVGSVLALTGAVAATLVGSELPILLVIPLVL
                     LLGTAFGGISGAIVAKGKVQAFIATLVTMTLLRGITMVYTDGRPISTGFSDQADAFAF
                     IGTGYLFGIPVPIWIMAVVFGLAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKI
                     FVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTL
                     VGALIIGFLNNALNLLDISSYYQMIAKALVILAAVLADNYLGTKKV"
     gene            6269..7147
                     /gene="rbsB"
                     /locus_tag="PXB09_001646"
     CDS             6269..7147
                     /gene="rbsB"
                     /locus_tag="PXB09_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDL5233753.1"
                     /translation="MKKLTTIASAVMLSLSVAATASAKETIALAVSTLDNPFFVSLKD
                     GAQKKADELGYKLVVLDSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIAN
                     RNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGSGAKVIQLEGIAGTSA
                     ARERGEGFKQAIEAHKFNVLASQPADFDRTKGLNVTENLLSSKGDVQAIFAQNDEMAL
                     GALRAVSSAKKEVVIVGFDGTDDGVKAVESGKLAATIAQQPELIGSLGVETADKVLKG
                     EKVEAKIPVDLKVISK"
     gene            7268..8197
                     /gene="rbsK"
                     /locus_tag="PXB09_001647"
     CDS             7268..8197
                     /gene="rbsK"
                     /locus_tag="PXB09_001647"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDL5233754.1"
                     /translation="MKKLTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQ
                     AVAAARLGAKVSFIGCIGSDDIGKAMKSAFEQDGIDTRSIKTIPNEMTGIAMIQVAES
                     GENSIVISAGANGHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKV
                     ILNPAPARALPDELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVL
                     ITLGSKGVFVSENGVGKIVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAH
                     AAAAISVTRKGAQPSIPTRQETLDFLSQQAVSF"
     gene            8211..9221
                     /locus_tag="PXB09_001648"
     CDS             8211..9221
                     /locus_tag="PXB09_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5233755.1"
                     /translation="MATMKDIARLAQVSTSTVSHVINNSRFVSEEIRERVQRVVKELN
                     YTPSALARSLKVNETKTIGMLVTATGNPFFAEVMAGVEQYCQQHQYNLIIATTNGDTE
                     RLQHHLQMLMQRKVDGLLLMCGDTRLNADESLNIPLPLVVLDWWFTELNADKIFENSI
                     SGGYLATKTLIEAGHSKIAIITGNLKKSLAKNRLEGYKKALAEANIPLNPNWVFESHF
                     DFAGGVNGMNALLAQSEKPTAVFACSDTIALGAYQAIWQQGLRIPQDISIIGYDDIEL
                     AKYLSPPLSTISQPKAELGRLAVETLLKRIRFKSTDFQTIMLEPELVLRHSIQTINKN
                     AE"
     gene            complement(9257..9886)
                     /locus_tag="PXB09_001649"
     CDS             complement(9257..9886)
                     /locus_tag="PXB09_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5233756.1"
                     /translation="MTAPTQILLIDDHPLMRQGMRQLLELDHQFSVVGEASNGTDGIK
                     LALRLEPDVIILDLNMKGLSGLDTLRSLRAQGIDARIIVLTVSDEQSDVFALMDAGVD
                     GYLLKDTDTPELLDNIRKAAAGEVVLSETVRQHLLNRQPENDPLSCLTDRELDVLQWL
                     ATGMSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLEQQKG"
     gene            10084..12243
                     /gene="rlmKL"
                     /locus_tag="PXB09_001650"
     CDS             10084..12243
                     /gene="rlmKL"
                     /locus_tag="PXB09_001650"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDL5233757.1"
                     /translation="MTNQTTYFATAARGFEEILKTELEQICAAECKVAQGGVHFTTTQ
                     KGAYQALLHSRLASRILLPLISTKIFSDSDLYASIVSFNWADLFDPRDTFYIDFSGTN
                     REIRNTQFGAMRVKDGIVDYFERKGFARPTVDKDNPDVRIHVYLDRENVVVSLDLSGD
                     ALHIRGYREETGKAPLRETLAAAIILRSGWKVGTPLVDPMCGSGTLLIEAAQMAANIA
                     PQLHRKHWGFNAWKGHQQAMWKAVLDEAFRNVELGAVGENCNSSLQKMFFGFDLDHRV
                     LTKAKQNAKNAGVDHLIQWQQGDVAALKNPIPEKIGTVVCNPPYGERLGTTPALIALY
                     SVFGQRLKQQFAGWNASIFSGEPELLNCLRLRSARQFKAKNGPLDCVQKNYSISEHNK
                     RSDLDENLQFEQNAQVAPDFANRLTKNIKKIEKWAKQQGIDAYRLYDADLPEYNLAVD
                     RYGDHIVVQEYQAPKNIDEQKARQRLLDAVSATLYVTGVETNKLVLKVRQKQKGTNQY
                     EKLANKGEYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMVGEMAKGKTFLNLFAYT
                     GSATVHAALNGAKSTTTVDMSNTYLNWAEQNLELNNLSLRHHRLFQADCLQWLAECRE
                     RFELIFVDPPTFSNSKRMENSWDVQRDHIELMKQLKRILTADGTIVFSNNKRGFKMDF
                     DGLAALGLTAENISHKTLPLDFERNPQIHNCWIVKNV"
     gene            12420..12899
                     /gene="trmL"
                     /locus_tag="PXB09_001651"
     CDS             12420..12899
                     /gene="trmL"
                     /locus_tag="PXB09_001651"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDL5233758.1"
                     /translation="MLDIVLYEPEIPQNSGNIIRLCANCGFRLHMIEPFGFGWDDKKL
                     RRSGLDYHEFVDIQKYKNFEDFLERAKPKRLFALTTRGEQNHSDVKYELGDFLMFGPE
                     SRGIPKPLLAEMPMSQKIRIPMCKDSRSMNLSNSVAVVVYEAWRQFGYQNAVAAQSI"
     gene            complement(12993..13811)
                     /locus_tag="PXB09_001652"
     CDS             complement(12993..13811)
                     /locus_tag="PXB09_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5233759.1"
                     /translation="MQEIKLFEQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYW
                     RKLKQRLKAEGNETVTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQ
                     WLAKVGYERLQEINDPSQSLDRARENWQKMGRSEKWIQQRMMGQETRNKLTDYWKSSG
                     VEQPQDFAFLTNVIHQEWSGLSVQKHKSLKGLKSQNLRDHMSEAELLFTALAELSSRQ
                     IAESMQAVGVDENAQAGKQGGNIAKNARQELENKTGKSVVTGENFLPPAKNEEE"
BASE COUNT         3986 a         2709 c         3208 g         3915 t
ORIGIN      
        1 ggttattctg ttttgtcaga tgtagatttt atttaaaaag aaaatcaaaa agagaagtga
       61 attattcagc taacgcttta cgttgagctt caactagctg gctaatgcct tgcttcgcta
      121 aatctagcaa tgtcagtaat tcttggtgcg agaacggttc gccttctgcc gtgccttgta
      181 cttccactaa acgaccatct tcgaccatca ccacgttcat atcagtttca gcgttggaat
      241 cttccagata ttctaaatcg cacaccgctt cgcctgctac aataccgaca gaaattgctg
      301 cgactaaacc tttcattggg ttagttttta gtgttccatt agctactaac ttattcattg
      361 catcgtacaa tgctacgcac gcaccggtaa ttgaggcggt gcgagtgcct ccatcggctt
      421 gaataacatc acaatctacg gtaacggtac gttcgcctaa ggcttttaaa tctaccaccg
      481 cacgcagaga acgggcaatc aagcgttgga tttccattgt gcgtccgcct tgtttgcctt
      541 ttgccgcttc acgctgagtg cgagagtggg tggctcgtgg caacatacca tattctgcgg
      601 taacccaacc ttgttgctga ccttttaaaa agcgtggcac gctttcttct accgtagcgt
      661 tacacaatac tttggtttcg ccaaactcaa ttaataccga gccttcggca tagcgagtgt
      721 agttacgggt aattttaatt tctctaactt ggttgtttgc tcgattattt ggacgcattt
      781 tcttttcctt ttgctaaaat ttttaccatt ttagcaaaga acacagtaaa atgtgatttt
      841 tctttagcaa agaatttaca tagccctcgc cccttgtggg agagggacgg atttttcttc
      901 gttcagaaga aaaatcaggg agaggggtaa gcggttattt ttatctcaaa ttttacaaat
      961 tcctccctct ctctgaaaaa tatttctgaa cgaaatattt ttcggtctct ctccctcaag
     1021 gggagagagc tttacttata aaaacacaag gaataccaat gatttatagt atgacagcat
     1081 ttgcccattt agaaatgaaa aaagagtggg gcaatgcggt gtgggaaatt cgctcggtaa
     1141 atcaacgctt tttagaaacc tattttcgtt tgccggagca gtttcgcaac ctagaaatga
     1201 ccttgcgtga gcgtttacgt tctgcactga cacgaggcaa agtagagtgt agcttacgca
     1261 ttgatttaag caaaacccaa aacagtgaaa ttgcgttaaa caaagaatat gccgcacagg
     1321 tggttcaatc attaaaatgg ttaaaagaaa ccgcaaatga aggcgaaatc aaccttgttg
     1381 atgtgctacg tttcccgggc gtggtggata atgaaagcca agatttagac caaattgctc
     1441 aagatttatt agccggcttt gaacaaattc tggcagattt tatcgcaatg cgagccagag
     1501 agggcgagaa cgtgcaagcc ctgatcttac aacgtttaga agcaatttca gttgaggctg
     1561 caaaggtaca agcccaaatg ccggaaattc tgcaatggca gaaagatcgt ttacaacaac
     1621 ggttcgatga actgaattta cagcttgatc cacaacgctt agaacaagaa atggtgttac
     1681 ttgcccaacg tgttgatgtg gcggaggaat tagaccgctt gcaattacac gttaaagaaa
     1741 ccaccaatat cctgaaaaaa ggcggtgcgg ttgggcgtaa actggatttt atgatgcaag
     1801 aactaaaccg tgaatccaac acgctcgcct caaaatcgat taatgcggac gtgaccaatt
     1861 cggcggtgga gctgaaagtg ttgatcgaac agatgcgtga acaaattcag aatttagaat
     1921 aggacagatt atggcaatga atttcaagca agtgagccag agctatccaa atctctgcgt
     1981 gccgctttct cagtattgtt taattgaaat cgcaggggta gatgctgaga aatatcttca
     2041 agggcaatta acctgcgatg tggcaaaaat ttcggtgggc gaacatacgc taaccagcca
     2101 ttgtgatccg aaaggcaaaa tgagtgcgtt actgcgtttg tatcgtgcag aaaatgagaa
     2161 atttatggcg atcattcacc gcagcttatt gcctgaagcc ctgacgcaac ttaaaaaata
     2221 tgcggttttt tcaaaagtga ccttcacgga attagacacc ccactttatg gtatggcagg
     2281 tgaagcagca tttgcaaaat taagcgaaaa tatgaccgct ttgcgtttaa ccacaggaca
     2341 gcctcgggcc attgtttggg gcgaagagct tgaaacgact gccgatgaac agctctggac
     2401 attaatggat attcaagacg gcattcctgt tctcttgcaa caaaaccagt ttgagctgat
     2461 tccacaggca accaatttac aggcacttga atctgcgatt tcattcacca aaggttgcta
     2521 catcgggcaa gaaacggtag cgagagcgaa atatcgtggg gcgaataaac gtgctttatt
     2581 tacccttgcc ggcaactttg aaagcgaaat cagcttaccg gaagttgctt ctgcgattga
     2641 aatgcaactg ggcgaaaatt ggcgagcaac cggcactgtg ttgaccagtg cgactgatga
     2701 aaataccctg tgggtgcaag tggtgctgaa taaagatgtt gaacctaaca ccaagtttag
     2761 agccaatggt gtagcgttgg aaatggtcga gttaccttat agtttggcag aaaatgagta
     2821 aaacgaacgg tcatcagggt atgaccgttt ttttatatct gatcagggtg atgaatcatc
     2881 acaaaacgtt cccacaactg ctcttcggtt tcgatattat caggatcttt gataatgcag
     2941 ttggtaatcg ggcaaacttt ctggcaagtc ggcttttcat aatgcccgac acattcggta
     3001 cataacaccg gatcgatgat ataaatatca tcgcccaccg aaatcgcctc gttcgggcat
     3061 tccggcaagc acatatcaca gttggtacat ttgtgggtaa ttaataaagc catagtttat
     3121 attgagaaaa taaaaattaa acaagcggtc gattttgcaa aaaaatttgc aaatcttacc
     3181 gcttgtcact aaatgctacc tattataaag caaaataatt tgaactactt cacatttttg
     3241 caatttggtt gtttatccga ttaagaaaat tttttatgat gccatcgaaa cgtttcgatg
     3301 gagtattttc caacgtgatg gagcgaaaat aaaggggtta gtatgaaaaa aacgctaaat
     3361 ctaaatgcac aactttcgca cagtattgcg acactcgggc ataccgatag tttaacggtt
     3421 tgcgatgccg gtttgccgat tccaaacaca atagagcgga tcgatttggc tttaaccgcc
     3481 ggtgtgccaa gttttttaca aacatttgat gtagtagtta gtgaattatt tgttgaacga
     3541 gtgctacttg ctgaagaaat taaacataaa aatccgcaag tgttagcagc tcttttggag
     3601 cgtttaaccc aattagaaca aactcaacag aataaaattc aaattgatta tgtgaaccac
     3661 gaaatcttta aagagcagac acattacagt aaagctgttg tgcgttcggg tgagtgttca
     3721 ccgtatgcca atattatttt atattcgggc gtgccgtttt agggtggaat gatggaaacc
     3781 ttattaaaaa tgagcgggat agataaagaa tttcccggcg tgaaagcctt gagcaatgcg
     3841 tgcttatctg tttacggtgg gcgagtaatg gcattaatgg gcgaaaatgg ggcaggtaaa
     3901 tccaccttga tgaaagtatt gacggggatt tatagcaaag atgccggctc tattagctat
     3961 ttaggcaaag aagttacctt taaaggcccg aaagattcac aagaagccgg tattagcatt
     4021 attcaccaag agctgaattt agtcggtaat ttaaccattg ctgaaaatat ttttttgggc
     4081 cgtgagtcca aaaccgcttg gggagctatt gattggaaaa aaatgtatgc cgaggcggat
     4141 aaactgcttg cccgacttgg ggtaaaacac agtagccatc agctttgtgc ggagttatcc
     4201 attggcgagc agcaaatggt ggaaattgcg aaagccctga gttttgagtc tcaagtaatt
     4261 attatggacg aaccgaccga tgctttaacc gatacagaaa cagcatcgtt gtttaaagtt
     4321 attcgagagt taaaagcgga aaatcgaggc attgtttata tttcccatcg tttaaaagag
     4381 atttttgaaa tttgtgatga tgtgacggtg ctaagagacg ggcaatttat cggcgagcga
     4441 gtaattgccg atattgatga agatcagtta attgaaatga tggttggtcg ccgtttggaa
     4501 gagcaatatc cgcatttaca ccaagagcgt ggcgagttat tacttgaagt gaagaattta
     4561 agtggaagtg gggtgaataa tgtgtcattc caattacaca aaggtgaaat tgtgggtatt
     4621 tccggcttaa tgggggcagg gcgtacagaa ttaatgaagg tgctttatgg tgcattgccg
     4681 aaaacagccg gctcgataga gttaaatgga aaagcgattt ccaaccattg tccgcaagat
     4741 gggttgaata acggcattgt gtatatttca gaagatcgta aaggcgatgg tctgattttg
     4801 ggaatgtcgg taaaagaaaa tatgtctttg acctctctcg atcatttctc caaagccggc
     4861 agtattcgcc acgatgcaga aaaattggcg gtcgatgatt ttattgagat gtttaacatt
     4921 aaaaccccaa gtcgggagca acaaatcggg ctgctttccg gtggtaatca gcaaaaagtg
     4981 gcgatcgcta aagggttgat gacccgcccg aatgtgctga ttttagacga gccgacacgg
     5041 ggtgttgatg tgggggcgaa aaaagagatc tatcaattaa ttaatgaatt taaaaaagat
     5101 gggcttagta ttttgatggt ttcgtccgat atgccggaag tgttgggaat gagcgaccgc
     5161 attttagtga tgcacgaagg gcaaatcagt gcagaatttt cacgagcaga agcgacacaa
     5221 gaaaagctac tggcagcagc tattggcaaa agtacaggat taaattaagg tgtgtttatg
     5281 gcaactcaaa caaagcagtt tcaacttggc agatttttaa tcgagcaacg ttcttttgta
     5341 gcgttattta ttttaattgt cagtgtttca atgattaacc ctgatttttt cagcgtggat
     5401 aatattttaa atattctacg ccaaacctcg gtgaatgcga ttattgcggt cggaatgacc
     5461 tttgtgattt taattgcagg cattgattta tcggtcggtt cggttttagc cttaaccggt
     5521 gcggttgcag cgaccttagt cggttctgaa ttgccgattt tgttggtgat tccgctggtt
     5581 ttattattag ggacggcatt tggtggtatt agtggggcga ttgttgctaa aggtaaagtg
     5641 caggcattta ttgcgacttt ggtcacaatg accttattgc gtgggattac gatggtttat
     5701 accgatggca gaccgattag caccggcttt tctgaccaag cagacgcctt tgcgtttatt
     5761 gggacaggct atttatttgg tattcctgtg ccgatttgga ttatggcggt agtgtttggg
     5821 ttagcttggt atattttgaa acacaccccg attgggcgtt acatttacgc tttaggtggc
     5881 aacgaatcgg caacccagct ttcaggcatc aatgtgaata aaattaagat cttcgtattt
     5941 gccgtgagtg gttttttatc tgctcttgcc ggcttaattg tgacttcacg tctctcttct
     6001 gctcagccaa cggcaggtgt gtcctatgag ttagacgcaa ttgcagcggt agttgttggt
     6061 ggaaccagtc taatgggcgg taaagggcgt gtaatgggaa cgcttgtcgg ggcattaatt
     6121 atcggtttct taaacaatgc ccttaattta ttggatattt cttcatatta tcagatgatt
     6181 gctaaagcgt tggttatttt agcagctgta ttagctgata attatctagg cactaaaaaa
     6241 gtttaatcta tctttaaagg agatttctat gaaaaaatta actacgattg catcagcggt
     6301 tatgttaagt ttatcggttg cagccactgc ttcggcaaaa gagactatcg ctcttgcagt
     6361 atcgacttta gataacccat tctttgtgag ccttaaagac ggtgcacaga aaaaagcaga
     6421 tgaattaggc tacaaattag tggtgcttga ttcccaaaat gacccggcta aagagctttc
     6481 caatgtggaa gacttaacgg tgcgtggggc aaaagtgtta ttgattaacc caaccgattc
     6541 ggaagcggtc ggaaatgcgg tggctattgc aaatcgcaac aaaattccgg ttattacact
     6601 tgaccgtggt gcagcaaaag gcgaagtggt tagccatatc gcttccgata acgttgccgg
     6661 cggcaaaatg gcgggagatt tcattgctca gaaattaggc tcaggggcga aagtgattca
     6721 attagaaggc attgccggca cttccgccgc tcgtgaacgt ggtgaaggct ttaaacaagc
     6781 gattgaagca cataaattca atgtattagc cagtcaaccg gctgattttg accgcactaa
     6841 aggcttaaat gtgactgaaa acttgctctc aagcaaaggg gacgtacaag ctatttttgc
     6901 tcaaaatgat gaaatggcac taggagcttt gcgtgcagtg agttcagcga agaaagaggt
     6961 tgtaattgtg ggctttgacg gcacagatga tggcgtaaaa gccgttgaaa gcggtaaact
     7021 tgccgcaacg attgctcaac aacctgaact gattggctca ttaggcgtag aaactgccga
     7081 taaagtgcta aaaggcgaaa aagtggaagc aaaaattccg gttgatttaa aggttatttc
     7141 aaaataatta tacttgaaga tagcgttcgt ctctgacgaa cgctttgaat taataaaata
     7201 gcactcgtca gagactagtg ctatcagaat cctagttttg ttgtactagg taatttgagg
     7261 gcttaatatg aaaaaactca ccgttctcgg tagcattaac gctgatcacg tgatttccgt
     7321 tccctatttt gccaaaccgg gggaaacgct caccggacat agctgccaca ttgcttatgg
     7381 cggtaaaggg gcaaatcagg cggtggcggc agcacgtttg ggagctaagg tttctttcat
     7441 cggttgtatt ggcagtgatg acatcggcaa agcaatgaaa tcagcctttg agcaagatgg
     7501 cattgacact cgctcgatta aaacgattcc gaatgaaatg accggcattg caatgattca
     7561 agtggcggaa tcgggcgaga acagtattgt gatttcagcc ggagcgaacg gtcatttgga
     7621 tgaaacggtt gtggcaaagt gtgcagccga aatcacacag gcggattatt tgctaatgca
     7681 gctagaaaca ccgttgccgg cgattgtgca agcagcaaaa ttggctcagc aaaacggcac
     7741 gaaagtaata ttaaaccctg cgcctgctcg agcgttaccc gatgaactgt taaacttact
     7801 ggatatgatt accccaaatg aaacggaagc ggaaatatta accggtgtga aagttgttga
     7861 tgaagccagt gcgattcaag ccgcacaagt gtttcaccaa aagggcatcg aaaaagtgtt
     7921 gattacactt ggctcaaaag gggtatttgt aagcgaaaac ggtgtaggca aaatcgttgc
     7981 aggcttccgt gttcaagcgg tggataccac tgccgcaggg gatactttta acggagcatt
     8041 agtgactgca atgttagaag ataaaccgct ggatcaagcc attcgttttg ctcacgcagc
     8101 ggcagcgatt agtgtgactc gcaaaggggc tcaaccttct attccgaccc gtcaggaaac
     8161 actggatttt ctaagccaac aagcggtgag tttttaggaa aattttgcaa atggcaacaa
     8221 tgaaggatat tgcacggctt gcacaggttt ccacctcgac cgtttctcac gttatcaaca
     8281 atagccgatt tgtcagcgag gaaattcggg aaagagtgca gagggtggtg aaagaactga
     8341 attacacgcc ttctgcattg gctcgtagcc tcaaagtgaa tgaaactaaa accatcggaa
     8401 tgctggtaac ggcaaccggc aatccgtttt ttgcggaggt gatggcgggg gtggagcaat
     8461 attgccagca acatcaatat aacctgatta ttgccactac caacggtgac accgagcgtt
     8521 tgcaacacca tttgcaaatg ctgatgcaac gaaaagtaga tggcttgtta ctgatgtgtg
     8581 gcgataccag attgaatgcc gatgagagct tgaatattcc gctgccattg gtggtgttag
     8641 actggtggtt taccgagctc aatgcagata aaatctttga aaattcaata tccggcggct
     8701 atctcgcaac aaaaacctta attgaagcag ggcattctaa gattgcgatt attactggaa
     8761 acctaaaaaa atcattggca aaaaatcgtt tagaaggcta caaaaaagca cttgccgagg
     8821 cgaatattcc actcaatcca aactgggtgt tcgaaagcca ttttgatttt gccggcgggg
     8881 ttaatggaat gaatgctttg cttgcccaaa gcgaaaagcc gacagcggta tttgcctgta
     8941 gcgacaccat tgctctaggg gcttaccaag caatctggca acaaggttta cgaataccgc
     9001 aagatatttc gattatcggc tatgacgata ttgaactggc aaaatacctt tccccaccgc
     9061 tgagtaccat tagccagccc aaagcggaac tcgggcggct tgcggtggaa actttgctaa
     9121 aacgaattcg ttttaaatcc actgattttc aaaccataat gcttgaacct gaattagttt
     9181 taaggcattc aatccaaaca ataaacaaaa acgctgaata atgtgaagtt attcagcgtt
     9241 ttttatccga tttcaattag cctttttgct gttccaaata aagcacggtg gcggcaactc
     9301 gggaatgcac gtttaattta cgcagtaaat tgcggatatg cacttttacg gtttcttcgg
     9361 aaataaagag ctgagccgca atttgtttgt tcgacatacc ggttgcgagc cattgtaaaa
     9421 catccagttc acgatctgtt aagcaactta aaggatcatt ttctggctgg cggttgagta
     9481 aatgttggcg aacggtttcg cttaatacca cttcaccggc agccgcttta cggatattat
     9541 ctagtagttc cggggtgtcg gtatctttta ataaatagcc gtccacacca gcatccatta
     9601 atgcaaatac atcggattgc tcgtctgaca ctgttaaaac aatgattctg gcatctatac
     9661 cttgagcgcg caatgagcgt aaagtatcta gccctgaaag ccctttcata tttaaatcca
     9721 gaataatcac atccggctca agtcgtaatg caagtttgat accgtcggtg ccgttgcttg
     9781 cttcacccac tacactaaat tggtgatcta attccaatag ttgacgcatt ccctgacgca
     9841 ttaatgggtg gtcgtcaatg agtaaaattt gagttggagc tgtcatttat ttctcctttc
     9901 ctttctctta atcggttaat tttgcaatta ttaattcaaa atagcaagtt tagggattta
     9961 ctaaatgccg cttttttgat cttagctaat ttttaactaa aaaagaaatt gcaaaacttt
    10021 gcaagaaaaa gaccgcttgt tcggctataa ttactgccaa tttttatttc aagtgtgaaa
    10081 agaatgacaa atcaaacaac ctattttgcc acggcagccc gtggttttga ggaaatacta
    10141 aaaaccgaac tggagcagat ttgtgcggca gaatgcaaag tcgctcaagg cggtgtgcat
    10201 tttaccacca cgcaaaaagg ggcttatcag gcattattac acagccgttt agcctctcgg
    10261 atcttactgc cgctcatcag caccaaaatt tttagtgata gcgatttata tgcttccatc
    10321 gtgtcattta actgggcgga tttattcgat ccccgtgata ccttttacat tgatttcagc
    10381 ggcactaacc gagaaatccg caacacccaa tttggggcaa tgcgagtgaa agacggcatt
    10441 gtggattact ttgaacgcaa aggttttgcc cgcccaacag tagataaaga taatccggat
    10501 gttcgcattc atgtttattt ggatcgtgaa aatgttgtgg tttcgcttga tttaagtgga
    10561 gatgccttac atattcgggg ctatcgggaa gaaaccggta aagctccgtt gcgtgaaaca
    10621 ttggcggcag ccattatttt gcgttccggc tggaaagtcg gcacgccatt ggttgatccg
    10681 atgtgtggtt caggcacgtt actgattgaa gcagcacaaa tggcagcgaa tattgcccct
    10741 caacttcacc gtaaacattg gggctttaat gcgtggaaag ggcatcaaca agcgatgtgg
    10801 aaagccgtgt tagatgaggc attccgaaat gttgaattgg gtgcggtagg ggagaattgc
    10861 aattcgtccc tacaaaaaat gttcttcggt tttgatctcg atcatcgtgt gctgactaaa
    10921 gcaaagcaaa atgcgaaaaa tgcaggggta gatcatctca ttcaatggca acaaggtgat
    10981 gtggctgcgt taaaaaatcc gattccggaa aaaatcggca cggtggtgtg taacccccct
    11041 tatggtgaac gtttaggcac aacgccggcg ttaattgctc tttattcggt gttcgggcaa
    11101 cgcctaaaac agcaatttgc cggttggaat gcctcaattt ttagcggcga gcctgaattg
    11161 ttaaattgcc tgcgtttacg ttcagcccgt caattcaaag cgaaaaacgg tccgttggat
    11221 tgtgtgcaga aaaattactc catcagcgag cataacaagc ggtcagattt agatgaaaat
    11281 ttacaatttg aacagaatgc tcaagtcgct ccggattttg caaatcgctt aaccaaaaat
    11341 atcaaaaaga tcgaaaaatg ggcgaaacaa caaggcattg atgcctaccg tttatacgat
    11401 gccgatctgc ctgaatataa tttagcggtg gacagatatg gcgaccacat tgttgtgcag
    11461 gaataccaag ccccgaaaaa tattgatgag caaaaagccc gccaacgctt gttagatgca
    11521 gtctctgcta cgctttatgt gacaggtgtt gaaactaata aattagtgtt gaaagttcgc
    11581 caaaaacaaa aaggcacgaa tcagtacgaa aaacttgcca ataaaggcga gtatttctat
    11641 gtgaacgagt atggggcgaa actgtgggtg aatttaaccg attacttgga tacgggtttg
    11701 ttcctagacc atcgcttaac ccgtaaaatg gtgggcgaaa tggcaaaagg caaaacattc
    11761 ctgaatctgt ttgcctacac gggttcagct acggttcacg ctgctcttaa tggggcaaaa
    11821 tcgaccacta cagtggatat gtcgaacacc tatttgaact gggcggagca aaatttagag
    11881 ctgaataatt tatcacttcg ccatcatcgt ttgttccaag ccgattgctt gcaatggctg
    11941 gcagaatgcc gtgagcgatt tgagctgatt tttgtcgatc cgccgacttt ctccaactca
    12001 aaacgaatgg aaaacagttg ggacgtgcaa cgagaccata ttgagttaat gaaacagctt
    12061 aaacgtattt taaccgctga tggtaccatt gtgttctcga acaataagcg tggctttaaa
    12121 atggattttg acggtttggc agcattaggc ttaacggcgg aaaatatttc gcataaaacc
    12181 ttaccgttgg attttgaacg caatccgcaa atccataatt gttggattgt gaagaatgta
    12241 tagataatac cctcgaccct tgtgggagag ggatagattt ttcttcgttc agaagaaaaa
    12301 tcagggagag ggtaagaagt tactgatgaa agagttattt ccccctctct ctgaaaaata
    12361 tttctgaacg aaatattttt cggtctctct cccacaaggg gagagagtaa ggctaaaaaa
    12421 tgttagatat tgttttatac gaacctgaaa ttccgcaaaa cagcggaaat attatccgcc
    12481 tttgtgccaa ctgtggcttt cgtttgcata tgattgaacc gttcggcttt ggttgggacg
    12541 ataaaaagct ccgccgttcg gggctggatt atcacgaatt tgtggatatt caaaaatata
    12601 aaaattttga agatttcctt gagcgtgcta agcctaaacg cttgttcgcc ttaaccacca
    12661 gaggggagca gaaccacagt gatgtgaaat atgaacttgg cgatttttta atgttcgggc
    12721 cggaaagcag aggcattcca aagccattat tagcggaaat gccgatgtcg caaaaaatcc
    12781 gcattccgat gtgcaaagac agccgcagta tgaatttatc taactcggtg gcggtggttg
    12841 tgtatgaggc gtggcgacaa ttcggctacc aaaatgcggt agcggcacaa tctatttaac
    12901 ttgcaagcgg tgtgattttg gctatttttt gcaagtttgt ggtcaaggtt gggggaggct
    12961 cgaccttgac taattaagaa catctattgt gtctattctt cttcattttt agctggaggt
    13021 aaaaaattct ctccggtaac aactgattta cctgttttat tctccaattc ctgacgggca
    13081 tttttggcaa tattgccacc ttgttttcct gcttgggcat tttcatcaac cccaactgcc
    13141 tgcatacttt ctgcaatttg ccgactggaa agttcagcaa gtgctgtaaa taacaattca
    13201 gcttcgctca tatgatctcg cagattttgg ctttttaaac ctttaagcga tttatgcttt
    13261 tgtacagata gtccgctcca ttcttgatga atcacattgg ttaaaaatgc aaaatcttgt
    13321 ggctgttcaa cccctgacga tttccaataa tcggtcagtt tatttcgggt ttcttgtccc
    13381 atcattcttt gctgaatcca tttttcactt cgtcccatct tctgccaatt ctcccttgct
    13441 cgatctagac tttgacttgg atcgtttatt tcctgtaagc gttcataacc tacttttgct
    13501 aaccattgtt tgaagggctc tgctttcgga ctagggatag attgaataag tcggaaaagt
    13561 tgttcggtat ctgctacatc agtcaaacgc atttttccgt cagcagaggg cattttcaac
    13621 ccgtgacaat ttgtcacggt ttcattgcct tctgccttta gcctctgttt tagcttacgc
    13681 caataagcag agggatctag gctttcggtt aaaatagcaa tcacatcaat aatagaaaaa
    13741 taccatttat ctttttcttc atcgtaatga ctgcgtacag atttctgttc aaaaagttta
    13801 atttcttgca taataaaa
//
LOCUS       DANLTI010000073        13757 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.073, whole genome shotgun sequence.
ACCESSION   DANLTI010000073 DANLTI010000000
VERSION     DANLTI010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13757
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.073"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..694)
                     /locus_tag="PXB09_001653"
     CDS             complement(<1..694)
                     /locus_tag="PXB09_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 52 protein"
                     /protein_id="HDL5233760.1"
                     /translation="MNLIICCTPLQVLIAEKIIEMHPNERFYGVMLSTVKNAKFDFYQ
                     ARLAQKCEQFFAMQQHSERIQLLKEIIYLKRTFGGKKFNKVFLANINELEIQFLLSAI
                     SFQELNTFDDGTANIVQNSIFYQAENIGLNRKLINFFLGNKYSLEKLKQRSKTHYTIY
                     KNFPNIIENTVYIDLINQVESVGTAPSNDDITHILLGQPIFERDDEKNIALAEKVIQQ
                     FGIDLYLPHPREK"
     gene            complement(691..1896)
                     /locus_tag="PXB09_001654"
     CDS             complement(691..1896)
                     /locus_tag="PXB09_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HDL5233761.1"
                     /translation="MKAVKDSVIYLIGELASKSIPFLLLPYFSRKLGVAGYGELSYYQ
                     TFAALFVIFIGLSQDGAVARYFYFYGKRSLNLVLSTGYLYTLCATLLILLGCWYFQSE
                     IIAYVAIGAMFQSFLNVQLSVRQCQKQALAYTTIQLMSAIFSAVITVAMMEYFKTDLV
                     EKRILAILMSNGLVFLIAYFLYAKRAKTKKFSLARHKTALLYLFGFGIPLILHHSSIF
                     LKGQLDRVFIYHKFSEEDLGLYAMGAQIAMILAIVVQALNKATLPYFYEALKQKKINV
                     SHIHKWALYALFIVPLPAIVMWFIPEELVVWILGSQFVGTKYYIILFLIATMLVVPYL
                     ILVNYLFFYGKNKLISLCSILSTIFYLVALFALTFSKIEYIPFASIIGAISIIPILYI
                     MTAKVGKTV"
     gene            complement(1906..3090)
                     /gene="neuC"
                     /locus_tag="PXB09_001655"
     CDS             complement(1906..3090)
                     /gene="neuC"
                     /locus_tag="PXB09_001655"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDL5233762.1"
                     /translation="MKNIAYITGSRAEYGIVKRLLQKLAQDPTVNFSLVVTAMHLDPQ
                     YGNTVTVIEQDGFEIAARIPLTLNSENNQTIIHSMAECLDRFGEHFQQHRYDAVIVLG
                     DRYEMLAVATAAAMHNIPLIHLHGGEQTLGNYDEFIRHCITKMSKLHLTSTEEYRQRV
                     IQMGELPENVVNTGSLGAENSLDLVLPTQAELVERLGIPASPYFLVVFHPETLTDVSV
                     LEQIEALLNAFEQFKDKYQFVFIGSNSDTNSEQIYARFKAYTDENQFKFFTSVKPEEY
                     LALIKYSNGLIGNSSSGLIEAPSCGVGTLNIGNRQQGRVRDESVIDVESNEQAIIDGI
                     EKLISADFQHRLPSMKNPYFQDNAMEKAYNAIKIFLADSHHTQPKGFYDVAFSQAVKK
                     SE"
     gene            complement(3091..4350)
                     /locus_tag="PXB09_001656"
     CDS             complement(3091..4350)
                     /locus_tag="PXB09_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5233763.1"
                     /translation="MKKIAIITARAGSKGLPNKNVLLANGKPLMAYSIEAAIESGQFE
                     KIIVSTDSQEYIDLFSHYPIEFIKRAEHLASDKASSFVVIEDVLNQYRSVEFDYFMLL
                     QPTSPLRSGEHIKESCEKFEKNFEQFDFLVSVSDAHKPTTLTRMIEEDECLKHFQLDY
                     SNYARQLHHPEYSPNGAIFTAKPEAYLKQKHFYGAKCLAYFMDKDVSIDIDDRQDFEY
                     FYFILQQRNKEKILLETIKRSILMKKENFKEVKEIALIGHSIIEYWDIEHLNGKAVNN
                     LGIAGISTKQYSDLILDEGLISALPKDIILMFGTNDIVYAGWSDEKILADINHLIAQL
                     TAIRGDINLYFLEITPTAFRVDRNNNDIRLLNQYLKDNLAVKWISLDQAFSDKYGKLD
                     LSYSDDGLHLNAKGYEKLTAILEKELN"
     gene            complement(4410..5447)
                     /gene="neuB"
                     /locus_tag="PXB09_001657"
     CDS             complement(4410..5447)
                     /gene="neuB"
                     /locus_tag="PXB09_001657"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDL5233764.1"
                     /translation="MVNVFIVAEIGCNHNGDPALAKKMVDVAKECGVDAVKFQTFKAD
                     KLISKYAPKAEYQKVTTGTADSQLEMTRKLELPYEEFVKLEAYARSLGLEVFSTPFDF
                     ESIDFLASQQQKVWKIPSGELTNLPYLEKIARLPIEGKTIVISTGMATIEETKASLKV
                     LEDNGVAKKDITILHCNTEYPTPYEDVNLNAFHQLKQEFGDYSLGFSDHSAGYFAGLA
                     AVPYGITFIEKHFTLDKNFEGPDHKASVTPEELKLLCEGIRAVEKSLGSSEKLVTNSE
                     AKNKIVARKSIIAARPIKKGEIFTTENITTKRPGNGISPMFWYDVLGKEAQQDFEEDQ
                     LIQDSRFENQM"
     gene            complement(5447..6091)
                     /locus_tag="PXB09_001658"
     CDS             complement(5447..6091)
                     /locus_tag="PXB09_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDL5233765.1"
                     /translation="MQQKSKREKLILIGAGGYAKSVLDSLDHEQYEFCGLIDNFKPEG
                     SVHLGYPILASTIDCFSKRDNYHYFICIGNNSYRLEKFSKLQKYKCRIINVVDKTALV
                     SKNSTLGIGVFVGKMAIVNSGVTVGDNVIINTKSLVEHGCFIGSHCNISTNTTLNGDV
                     IVEDHAFIGSSSVVNGQLRVGESALVGSGAVVIRNVEPRTVVAGVPAKYIKDIK"
     gene            6224..6967
                     /locus_tag="PXB09_001659"
     CDS             6224..6967
                     /locus_tag="PXB09_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5233766.1"
                     /translation="MFEFIKLITAMILPPFNIILLWLLALILFSLGYKYAAYFFALLG
                     ILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGKLAITG
                     IPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKWLENKAKTT
                     KENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDTPDHYKL
                     NFMHFIPQAGAMNSNMLALKEWIGYWKEK"
     gene            complement(7044..9242)
                     /gene="priA"
                     /locus_tag="PXB09_001660"
     CDS             complement(7044..9242)
                     /gene="priA"
                     /locus_tag="PXB09_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDL5233767.1"
                     /translation="MALNVPLHRYFDYLLPPAFNACQGGRVVVPFGRQTKIGIVVDFP
                     QTSDVPTEKLKPIKAALDSSPIFDSEMWQLLNWAARYYHAPIGEVLTGALPIKLRNGD
                     STERVQPNYFVVTEQGRKSLIIGENKKAKKQVERLTELAECAKYFEKPTACSPSAWKG
                     LLEKGYIEKIDVPFMAQAWQDSLGEFPLVNTNNRLILNKQQTLVVSRLNAQTTFASFL
                     LNGVTGSGKTEVYLQLIETVLKREEQVLLLVPEIGLTPQTVQRFKARFNVEIDVLHSN
                     MNETERLNAWLRAKNGESAIVIGTRSALFTQFQKLGVIILDEEHDSSFKQQDGWRYHA
                     RDLAVVRAKNANIPIVLGSATPSLESLHNVQNGKFIELTLTARAGNAQLANQQIIDLK
                     TQRVTAGLSERLLSMMKTQLEQGNQVMLFLNRRGFAPVLLCHECGWVCECEACNKPFT
                     YHQKQKVLRCHHCATQRVIPRQCGHCGSTHLITTGVGTEQLEQVLNQQFPHYQVTRID
                     RDSTARKGALENHLTAIREGKSQILIGTQMLAKGHHFPNVTLVAIVNVDSALFSTDFR
                     AEEKLAQLYIQVAGRAGRAEKKGEVVLQTHYPDHPLLKTLLEQGYRAFADEALKMRQL
                     MSLPPFSSQVLFKATGKDNQQTLQLLEQLADYFSQKIQQQNGQGFQLPPPFSAPMAKK
                     AGHYRWLLLIQHPLRGALQQLLDAFDQERESLNIPNNIRLNIDIDPQEIS"
     gene            complement(9254..9866)
                     /locus_tag="PXB09_001661"
                     /pseudo
     CDS             complement(9254..9866)
                     /locus_tag="PXB09_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
     gene            complement(9859..10758)
                     /gene="rarD"
                     /locus_tag="PXB09_001662"
     CDS             complement(9859..10758)
                     /gene="rarD"
                     /locus_tag="PXB09_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5233768.1"
                     /translation="MLKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPF
                     LFLALYLFKKQNEFWVFLQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVS
                     MGYLLMPIIMVAFGKVVYKETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGY
                     PIYFYLRRKFGLSHLHSFVVEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLI
                     SGTALISYTLASTILPFNLLGLLGYVEPLLMLVVSFLIGERLANESYLLMICLLISIS
                     FLVLDGMFALRQQRKRKLSVNNE"
     gene            complement(10985..12202)
                     /locus_tag="PXB09_001663"
     CDS             complement(10985..12202)
                     /locus_tag="PXB09_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDL5233769.1"
                     /translation="MDRFPKSDKLAQVRYDIRGPIHKEALRLEEEGHKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIVQYYQSKGMRGMDVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPMPDYPLWTAASTLAGGKAVHYLCDEENEWFPDLED
                     IKSKITPRTKGILVINPNNPTGAVYSRQILLEIAELARQHNLIIFADEIYEKIVYDGA
                     VHHHIAALAPDVLTVTYNGLSKAYRVAGFRQGWMVLSGPKHQAKGFIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFVLPGGRLLEQRNKMHELLVQIPGISCVKAKGALYM
                     FPKIDTEMYGIKDDQKFIYDLLRQEKVLLVQGSGFNWKKPDHFRVVTLPYAHQIEEAI
                     GRLANFLKTYRQD"
     gene            12390..13694
                     /locus_tag="PXB09_001664"
     CDS             12390..13694
                     /locus_tag="PXB09_001664"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDL5233770.1"
                     /translation="MLIFHQLKQELTKSYSKVGREQGLVAIQASMPLLEANIPLLGWL
                     KTQKTSYPHFFLQYRDTDQTIATIGTLRQFYTLEAAQSFIQQHHFPLIGGLQFEGNTQ
                     FILPQFSLVKNQQNLTACFYFDSDNFEQQAVIFEQFLANFSQITELGLTDNPLVSMSA
                     TSHFEQWKANIEKAIVSIEQGDFQKVVLANAMRLHFEQPICAYSLLAQSQKTNLGCYH
                     FLWAESADVAFLGSTPERLYQRQGLHFSTEALAGTAAVTTSEVQTELNAQWLLSDPKN
                     IYENQLVVDDIENQLKDCVTEFAVSEAKIKRLHNVQHLRRQIQATLKPDTSDSDCLSK
                     IHPTAAVAGLPRQKAKGFITENEPFTRHWYAGTLGVMGNEEAEFCVTLRSALISQNSI
                     TLYAGAGIVSGSDPQSEWQEIKRKAQGMAKLLDVDLVTKGEL"
BASE COUNT         4250 a         2911 c         2495 g         4101 t
ORIGIN      
        1 atttttctct tggatgcggt aaatatagat caatgccaaa ttgttggata actttttccg
       61 ccaatgctat atttttttca tcatctcgtt caaaaatagg ctgtcctaat aaaatatggg
      121 taatatcatc gttagatggt gctgtaccca ctgattcaac ctgattaatg agatcaatat
      181 aaaccgtatt ttcaataata ttcggaaaat ttttgtaaat tgtataatga gttttagagc
      241 gttgtttcag cttttctagg ctatatttat tacctaaaaa aaagttaatc aattttcgat
      301 ttaacccaat attttcagct tgatagaaaa tactgttttg tacaatatta gctgtgccat
      361 catcaaaggt attgagttct tgaaatgaaa tggcacttaa cagaaattga atttctaact
      421 cattgatatt tgctaaaaag actttattaa acttcttacc gccaaaagta cgttttaaat
      481 aaataatttc ttttaataat tgaatacgct cgctatgttg ttgcatcgca aaaaattgtt
      541 cgcacttttg ggctaatcta gcttggtaaa aatcaaattt cgcgtttttt accgtagaaa
      601 gcatcacccc atagaatcgc tcattagggt gcatttcaat gattttttca gcaatcaaca
      661 cttgcaaggg cgtgcaacaa ataattaaat tcatacggtt tttcctactt ttgccgtcat
      721 tatataaaga atcggaataa tgctgattgc accaatgatg ctggcaaaag gaatatattc
      781 aattttagaa aaagttaaag caaatagtgc aactaaataa aaaatagtag ataaaatcga
      841 gcaaagcgaa attagcttat ttttgccata aaaaaacaaa taattgacta aaatgaggta
      901 aggcacaacc aacattgtcg caattaaaaa gagaataatg tagtattttg ttcctacaaa
      961 ttggctaccc agaatccata ccactaattc ttccggaata aaccacatca caatagcagg
     1021 taatggtaca ataaataagg catacaacgc ccatttgtgg atatggctga cattaatttt
     1081 tttctgcttt aaggcttcat aaaaataagg cagtgttgct ttatttaagg cttgaaccac
     1141 aatggctaga atcatcgcaa tttgagcccc cattgcatat aaacctaaat cctcttcgct
     1201 aaatttatgg taaataaata ctctgtctaa ctgtcctttt aagaaaatac tggaatggtg
     1261 caaaatcaac ggaataccaa agccgaataa atacaataaa gcagttttat ggcgggcaag
     1321 gctaaatttc ttcgtttttg ctcttttagc atacaaaaag taagcgatta gaaagactaa
     1381 gccattactc atcaaaatcg ctaaaatccg cttttccact aaatcggtct taaaatactc
     1441 catcattgca acggtaataa ctgccgaaaa aatcgccgac attaattgaa tcgttgtata
     1501 agcaagtgcc tgtttttgac actgccttac actaagctgt acattcaaaa acgactggaa
     1561 catcgcccca atcgctacat aagcaataat ttcagactgg aaataccagc aacccaacag
     1621 gataagcaaa gttgcacaaa gagtatataa ataccctgta ctcaagacta aatttagtga
     1681 acgcttacca taaaaataga aatagcgagc aaccgcaccg tcttggctaa gcccgataaa
     1741 aattacaaat aaagcagcaa aggtttggta gtaggaaagc tccccataac ctgccacgcc
     1801 gagtttgcgt gaaaagtagg gtaagagcaa gaaaggaatt gactttgacg ccaattcccc
     1861 aattaaataa atcacactgt ctttaactgc tttcatagtt gcaaattatt ctgatttttt
     1921 gaccgcttgc gagaaagcaa catcataaaa tcctttcggt tgagtatggt ggctgtctgc
     1981 taagaatatt ttgattgcat tgtaagcctt ttccatcgcg ttgtcttgaa aatatggatt
     2041 tttcatactc ggtaaacggt gttggaaatc ggctgaaatc aatttttcga taccatctat
     2101 gatagcctgt tcattactct ctacatcaat tacgctctca tcccgtactc gcccttgctg
     2161 gcgattaccg atatttagcg taccaacacc acaactcggt gcttcaatca agcctgatga
     2221 gctattacca atcaacccat ttgaatattt aatcaacgct aaatactctt ccggtttgac
     2281 tgaggtgaaa aacttaaatt gattttcatc ggtgtaagcc ttaaaacgtg cataaatttg
     2341 ctctgaattg gtgtctgaat ttgagccgat aaagacgaat tggtatttgt ctttaaactg
     2401 ctcaaaagca ttgagtaacg cctcaatttg ctccaacacg gaaacatcgg ttaaggtttc
     2461 cgggtggaag accactaaaa aataaggcga tgccggaatc cctaatctct cgactaattc
     2521 tgcttgggtc ggcaacacta aatccaaact attctccgcc cctagagaac cagtattcac
     2581 cacattttcg ggcagctcgc ccatttgaat cacacgctgt ctatattctt cagttgaagt
     2641 taaatgcaat ttcgacattt tggtaataca atggcgaata aattcatcgt aattacctaa
     2701 tgtttgctca ccaccgtgca gatgaatcag cggaatatta tgcatcgccg cagccgttgc
     2761 caccgccaac atctcgtaac gatcgcctag cacaatcacc gcatcataac gatgttgctg
     2821 gaaatgttcg ccaaatcgat ctaaacactc tgccattgaa tgaataatgg tctgattatt
     2881 ttcactgttt aaggtaagcg gaatacgagc tgcaatctca aagccatctt gctcaatgac
     2941 cgtcaccgta ttgccatatt gcggatccaa atgcatcgca gtaacaacca gagagaaatt
     3001 cacagtcgga tcttgtgcta atttttgtaa taaacgcttt acaatcccgt attcggcacg
     3061 agatccggta atataggcaa tatttttcat ttagttgagc tctttttcca aaatagcggt
     3121 taatttttca taaccttttg catttaaatg taatccgtca tcgctatagc ttaaatccaa
     3181 tttgccatat ttatcgctaa atgcctgatc taagctaatc catttcaccg ctaaattatc
     3241 tttaagatat tgatttaaca agcgaatatc gttgttatta cgatcgactc taaatgcagt
     3301 tggggtaatt tccaagaaat agagattaat atctccacga attgctgtta attgtgcaat
     3361 taaatgatta atatctgcta gaattttttc atcactccag ccagcatata caatatcatt
     3421 agtaccgaac attaaaataa tgtctttagg taaagcagaa attaaacctt catccaaaat
     3481 cagatcactg tattgttttg ttgaaatacc tgcaattcct aaattattaa ctgccttacc
     3541 gtttaaatgt tcaatatccc aatattcaat gatcgaatgc ccgattaagg ctatctcttt
     3601 cacttcttta aagttctctt ttttcattaa aatcgaacgt ttaatggttt caagtaagat
     3661 tttttcttta ttgcgttgtt gcagaataaa gtagaagtac tcgaaatctt ggcgatcatc
     3721 aatatcaata gaaacgtctt tatccataaa ataggctaga catttcgcac catagaagtg
     3781 tttttgttta agataggctt ctggcttagc tgtaaaaata gctccattcg gtgaatattc
     3841 aggatgatgc aattggcgtg catagttaga ataatccaac tgaaaatgct ttaggcactc
     3901 gtcttcctca atcatacgag tcaatgtcgt aggtttatgg gcatcagaaa cagatactaa
     3961 gaaatcaaat tgttcgaaat ttttctcaaa tttttcacac gattccttaa tatgctctcc
     4021 tgatctcaac ggcgaagttg gttgaagtag cataaaatag tcaaactcta ctgatctata
     4081 ttgatttaac acatcttcaa tcacgacaaa agaactcgcc ttatcactgg ctaaatgctc
     4141 ggcacgttta ataaattcaa ttggataatg tgagaacaaa tcaatgtatt cttgggaatc
     4201 agtactaacg ataattttct caaattgccc cgactcaatc gcagcttcaa tagaataggc
     4261 cattaacggc ttaccgttgg ctaataatac atttttattc ggcaagcctt ttgaaccggc
     4321 tcgggctgta ataattgcaa tttttttcat aaatttgacc gcttgttaaa cacaaaatga
     4381 tggagctttc atcccatcac tatattatat tacatctgat tttcaaaacg agaatcttga
     4441 attaattgat cttcttcaaa atcctgttgt gcttctttac ctagcacatc ataccaaaac
     4501 atcgggctaa tgccattacc ggggcgttta gtcgtaatat tttcggttgt aaaaatttcg
     4561 ccttttttaa ttggacgtgc cgcaataatt gattttcttg ccacaatttt attttttgct
     4621 tccgaattag tgactaattt ctcggaagaa cccagcgatt tttccaccgc acgaatgcct
     4681 tcacacagta atttcagctc ttcaggtgta accgaagctt tatgatccgg accttcaaag
     4741 tttttatcta aggtaaaatg tttttcaatg aaggtaatgc cgtaaggtac tgccgccaac
     4801 cctgcaaaat aaccggcaga gtggtcagaa aaacctaaac tatagtcgcc aaactcctgt
     4861 tttagctgat ggaacgcatt taaattcaca tcttcataag gtgtcgggta ctcggtatta
     4921 caatgtaaaa tcgtaatatc ttttttcgct acaccgttat cttccaatac ttttaatgag
     4981 gcttttgttt cttcaatggt tgccataccg gtagaaataa cgatcgtctt gccttcaatc
     5041 ggaagtcgtg caattttttc taaatacggc aaattggtta attcaccaga cggaattttc
     5101 cacacttttt gttgttggct tgccaagaaa tcaatcgact cgaaatcgaa tggcgtagag
     5161 aatacctcta accccaatga acgagcgtaa gcctctaatt tcacaaactc ctcataaggt
     5221 aactctaatt tgcgggtcat ttctaattgg gaatcagcgg tgccggtcgt tactttttga
     5281 tactcggctt taggggcata tttagagatc aacttatccg ctttaaaggt ttggaatttc
     5341 accgcatcga caccacactc tttcgctaca tcaaccattt tctttgctaa cgcaggatcg
     5401 ccgttatggt tacaaccgat ttctgccaca ataaatacat ttaccattat tttatatcct
     5461 taatatattt tgctggaacg cctgctacaa ctgtgcgagg ctccacattt ctaattacca
     5521 ctgcaccgga gccaaccaat gcactttcac ccactcttag ctgtccgttc acaacagagg
     5581 aactaccaat aaaagcatga tcttcgacaa ttacatcgcc atttagtgtc gtattggttg
     5641 aaatattgca atgactgccg ataaaacaac catgctcaac cagcgattta gtgttaatga
     5701 tcacattatc gcctacagtt acgccactgt ttacaattgc catttttcca acaaacactc
     5761 caatgcctag agtggaattt ttggacacca atgcggtttt atctaccaca ttaattattc
     5821 tacacttata tttttgtagc ttagagaatt tttctaaacg gtaactatta tttccaatac
     5881 aaataaaata gtgataatta tctcgtttag aaaaacaatc aattgttgaa gctagaatag
     5941 gataacctaa gtgcacacta ccttcaggct taaagttatc gataagtcca caaaattcat
     6001 attgttcgtg atcaagtgaa tctaacactg atttggcata gccaccggca ccgatcaaaa
     6061 tcaatttttc tcttttagac ttttgttgca ttgctatcac ccatgatgaa tttcaattca
     6121 tatggagtat tctaatactt ttcaagatag aaaaatagac aagtcttata taatttagga
     6181 aaatgaacat atctttactt atttttacta cgatattctt tctatgttcg agttcattaa
     6241 actgatcacc gcaatgatcc tcccgccatt taatattatt ttgctgtggt tgttagcatt
     6301 aatcctcttt tctttaggct ataaatacgc tgcttacttc tttgccttgt taggtattct
     6361 gattttatat atcttcagca ttccctatac ttcacagaaa ttaggggatt cattagtcga
     6421 agcagagcca tttaccatag agaaatataa aaatgctcaa gcgattgtgg tgctaggtgg
     6481 cgggctacga gacagccaag agttattcgg caaactggca attaccggta ttccgctgga
     6541 aagaatgcgt tatgccgctt atctgcataa agaaaccggc ttaccgattt tagcgaccgg
     6601 aagcagccca aatgggactt ctgaggcaaa ggttatggca gatgaattta aaatgttctt
     6661 caatattgag accaaatggc tggaaaataa ggcgaaaacc accaaagaaa atgcgatttt
     6721 cagccgtgag attttagaaa aagagaatat tcataaaatc attcttgtta ccaaccaatg
     6781 gcatatgaaa cgggctgaaa tgctgtttag ccaacaagga tttgaggtga tgtctgccag
     6841 cgtcggttct ggcgatacgc ccgatcatta caaactcaac tttatgcact ttattccgca
     6901 agccggtgca atgaatagca atatgctggc attaaaagag tggattggtt attggaaaga
     6961 gaaataaccg aagataaata gcagcaaggc aggttttcac ctgccttctt tttgcaaaaa
     7021 atcagtcaaa aacaaccgct tgtctaacta atctcttgtg ggtcaatgtc gatattcagc
     7081 ctgatattat tcggaatgtt taaactttcc ctttcttgat caaaggcatc gagtagctgt
     7141 tgtaatgctc ctcggagagg gtgttgaatc agcaataacc agcggtaatg tcctgctttc
     7201 ttcgccattg gggctgaaaa tggtggaggg agctggaagc cttgcccgtt ttgttgctgg
     7261 attttttggc taaaataatc tgctaattgc tcaagcagct gtaaggtttg ttgattatct
     7321 ttgccggtcg ctttgaacaa aacttgcgag gaaaatggtg gcaaactcat taattgcctc
     7381 atttttaacg cctcatcagc aaaagctcgg tagccttgtt ccagcaaggt tttaagcagt
     7441 gggtgatcag ggtaatgggt ttgtagcacc acttcgcctt ttttctccgc tcgccctgct
     7501 ctgcctgcca cctgtatgta aagctgtgct aatttttctt ccgcacgaaa atcagttgaa
     7561 aataacgctg aatccacatt aacaatcgcc accaacgtca cattcgggaa atgatgccct
     7621 tttgccaaca tttgcgtacc aatcaaaatt tggcttttgc cctctcgaat agcggtcaaa
     7681 tggttttcca atgcaccttt gcgagcggta gaatctctgt ctatacgagt cacttggtaa
     7741 tgagggaatt gctgatttag cacctgctca agttgttctg tgccgacacc ggtagttatt
     7801 aaatgggttg aaccacaatg tccgcattgg cggggaatta ccctttgggt ggcacaatga
     7861 tggcaacgca acactttttg cttttggtgg taagtaaaag gcttattaca cgcctcgcac
     7921 tcacaaaccc aaccgcattc gtgacaaagt aataccgggg caaagccacg gcgatttaaa
     7981 aacagcatca cttgattgcc ttgctctaac tgggttttca tcattgaaag caagcgctcc
     8041 gacaaaccgg cagttacccg ttgcgttttt aaatcaataa tctgctgatt ggcaagttgt
     8101 gcattgccgg cccgagcggt tagtgtcagt tcgataaatt tcccgttttg cacattgtgc
     8161 aaactttcaa gacttggcgt tgccgagccc agcacaatcg gaatatttgc atttttcgcc
     8221 ctaaccaccg ccaaatcccg tgcgtggtaa cgccaaccgt cttgttgctt aaacgagcta
     8281 tcgtgttctt catccaagat aatcacgccc aatttttgaa actgggtaaa taaagcagag
     8341 cgagtgccga ttacaatcgc actttctcca tttttcgccc gcaaccacgc atttaaccgc
     8401 tcagtttcgt tcatattcga gtgcaatacg tcaatttcaa cgttaaagcg agctttaaag
     8461 cgttgtaccg tttgcggtgt tagcccgatt tcaggcacaa gcagcagcac ttgttcctct
     8521 cgcttaagca ccgtttcaat taactgcaaa tacacttcgg ttttgcccga gcctgttacg
     8581 ccattgagta aaaagctcgc aaaagtggtt tgtgcattta aacggctgac cactaaggtt
     8641 tgttgtttat ttaagatcag ccgattgtta gtatttacta acggaaattc acctagtgag
     8701 tcttgccacg cttgtgccat aaacggcaca tcaattttct cgatataccc tttttcgagt
     8761 aagcctttcc aagcagatgg gctacaagcg gtcggttttt caaaatattt tgcacattcg
     8821 gcaagctcgg ttaaccgttc cacctgcttt ttggcttttt tattttcacc gataatcaga
     8881 gatttccgcc cttgctccgt caccacaaaa taattcggtt gaactcgctc agtggaatcg
     8941 ccattgcgta attttatcgg taaggctccg gttagcactt caccaatcgg ggcgtggtaa
     9001 taacgagccg cccagttcag cagttgccac atttctgagt caaaaatcgg gctagaatcc
     9061 aacgctgctt taatcggttt gagtttttcg gttggcacat cactagtttg cgggaaatcg
     9121 accacaatgc cgattttggt ctggcgacca aaaggcacaa ccacccgccc gccttggcag
     9181 gcattgaatg ccggcggtag caaataatca aaataacgat gtaacggcac attcagtgcc
     9241 actctgatta atctcacttc tctaaaccaa ttttgattgc aagcccgata aatatcgagc
     9301 cgcagatttt atttaaccaa tttccaaagg tttgattatg ccgtaaaaaa cgcccaacag
     9361 gtgcagcggc taagactaaa atacttaccc aaataatgct ggtggataaa aacgttagcc
     9421 ccaacagcat aaaaggtatt ttccaaatta ctggatacaa actgcggcaa taacgccaag
     9481 aaaaagagca atactttcgg gtttaataga ttggtaatca acccttgacg gaatatcttc
     9541 catagaggaa gtttgtctag attgattttc tctaacacca acggctctcg ccacatttta
     9601 atgccgagat agcagagata aattgcccct gcgtatttca gaaaattaaa taaagtgggc
     9661 gaatgtgcca caatgcctgc aagcccgagt gaaaccgcaa gaatatggca taaaatgcct
     9721 gctagaatgc cgaatgaaga cattaagccc gactttttcc cctcagcaat agtgcgagtt
     9781 aaaatataga tagtatccga acccggtgta agatttagca gaatacaagc ggtcaaaaat
     9841 ccccaataat ttacaatatc actcattatt cacactcaat ttacgtttac gctgctgacg
     9901 aagagcaaac ataccatcta atactaaaaa tgaaatggag atcaacaagc aaatcatcaa
     9961 caagtaagat tcatttgcta acctttcgcc aattaagaaa gacaccacca acatcaatag
    10021 tggctcaaca tagcctaata aaccaagcaa attaaagggt aaaatcgtgc tggctagcgt
    10081 atagctgata agtgcagtgc cactaattaa acccagtaat gcaataaaat agtaaatatt
    10141 gaggttttgt gtttcgacat attgcatatc ggtttgagag ataaaataac aagctacagg
    10201 gagcaaatat aaaatttcta ccacaaagct atgtaaatgg cttaagccaa actttcggcg
    10261 aaggtaaaaa tagattgggt aacctgtgca aacaaataaa cttgctatcg aaatttttcc
    10321 cgtaaacaaa atattactcg ctacaccaat gaaagcaacc acaatcgcca accatttatt
    10381 caaggaaagc gtttctttat aaaccacttt gccaaatgcc accataataa tcggcattaa
    10441 tagatagccc attgaaacct caatcgcttt tccgctattg ggagcccata aaaacagcca
    10501 catctgcccg cccacaatag atgccgtgat taaaataacc agcaataaat aaggctcttg
    10561 ctttaggcgt tgaagaaata cccaaaactc attttgtttt ttaaataagt ataaagcaag
    10621 gaaaagaaaa ggaatcgtaa ccagcatacg aatgccgaaa atgctcacac ctgccagcgg
    10681 ttttagaaag atcgccaaat agtacataca gccgaataac actgaggctg aaagagataa
    10741 aagaatgcct tttaacatag tgataagaaa gtaattattt tttaattttt caaatctccc
    10801 ctacccctct tttctaaaga ggattgtcga gttctaaata aatgaataat gttcggaggt
    10861 aggggcgggt ccagtgcccg cccgcaaatt aatatcgtta gcggacaggc acaggacctg
    10921 tccctactga tattatagaa cttacaaccc tgcttttata aagtggggta aagggagatt
    10981 cgacttagtc ttgacgatag gttttcaaga aattcgcaag gcgaccaatc gcttcttcaa
    11041 tttgatgtgc ataaggcaaa gttaccacac ggaagtgatc cggttttttc cagttaaaac
    11101 cggaaccttg cactaatagc actttttctt gtcgcaacaa atcgtagatg aatttttggt
    11161 catctttaat gccgtacatt tcggtatcaa ttttcgggaa catatataac gcccctttcg
    11221 cttttacaca gctaataccc ggaatttgta ccaataattc gtgcatttta tttcgttgtt
    11281 ccagcaaacg accgcccggc aacacaaatt cattgatact ttgataacca cctaatgcgg
    11341 tttgaatggc gtgttgcatc ggcgtattgg cacataaacg catagaagag agcatatcca
    11401 acccttcaat aaaacctttg gcttgatgct tcggaccgct cagcaccatc cagccctgac
    11461 ggaaaccggc aacacgatac gccttggata aaccgttata agttacggtt aatacgtccg
    11521 gtgcaagagc agcaatatgg tgatgtaccg caccatcata gacaattttt tcataaattt
    11581 cgtcagcaaa aataattaag ttatgctgac gggcaagttc tgcaatttcc agcaaaattt
    11641 gacggctata cactgctccg gtcgggttat tcgggttgat aaccaaaatc cctttagtgc
    11701 gaggcgtgat tttcgattta atatcttcaa gatcagggaa ccactcattt tcttcatcgc
    11761 acaggtaatg cactgcttta ccaccggcta gggttgaagc tgctgtccat aacggataat
    11821 caggcattgg aattagaatt tcatcgccat catttaataa cgcctgcatc gacattgtaa
    11881 tcagttcaga tacgccgttg ccgatgtaaa catcgtttac atccatacca cgcatacctt
    11941 ttgattgata atattgcaca atcgctttgc gggcagaata caaacctttt gaatcacaat
    12001 agccttgtgc ggttggaaga ttacgaatca catccactaa aatttcatcg ggtgcttcaa
    12061 agccaaaagg ggctgggtta ccgatattta attttaaaat tttatgccct tcttcttcta
    12121 agcgaagtgc ctctttatga attggcccac ggatatcgta acgaacctga gctaacttat
    12181 ctgatttggg aaaacgatcc attgtaaact tcctataatg tattatctaa ttgtagtctc
    12241 atcccgctgt tcaaaaaatc ggtaattcgg aatgaatttg taaacattac tctaatttgg
    12301 gaggaaaaaa aagaggaaat acgttaaaat ggagaccttt ttttcaatca gctaaaaaca
    12361 agcggtttct ttttctgatt tttttgcaaa tgcttatttt tcatcaatta aaacaagaac
    12421 ttacaaaaag ttactcaaaa gtgggaagag agcaaggatt ggtcgccatt caagcctcta
    12481 tgccgctatt ggaggcaaat attccgctac tcggttggtt gaaaacacaa aaaacaagct
    12541 accctcactt ttttctgcaa tatcgtgata cagatcagac cattgccacc attggcacac
    12601 ttcgccaatt ttatacgcta gaagctgcac aatcttttat tcaacaacat catttcccgt
    12661 taatcggcgg gcttcaattt gaaggcaata cgcaatttat tttgcctcaa ttttcattgg
    12721 taaaaaatca gcaaaattta accgcttgct tctattttga tagtgataac tttgaacaac
    12781 aagcggttat ttttgaacaa tttcttgcaa atttcagcca aattaccgaa ttaggactaa
    12841 cggataatcc gctcgtttca atgagtgcca ccagccattt tgagcaatgg aaagccaata
    12901 ttgaaaaagc gattgtttct attgagcagg gcgattttca aaaagtggta ttggcaaatg
    12961 cgatgagact tcattttgag caacccattt gtgcttacag cttgctggca caaagccaaa
    13021 aaacaaattt aggttgttac cactttttat gggcggaaag tgctgatgtt gcctttcttg
    13081 gctcaacccc tgagcggcta tatcaacgcc aagggctaca cttttctacc gaagccctcg
    13141 ccggcaccgc tgcggttacc accagtgaag tgcaaaccga actcaatgca caatggctgt
    13201 taagtgatcc caaaaatatc tatgaaaatc aattagtggt tgatgacatt gaaaaccaac
    13261 tcaaagattg cgtgaccgaa tttgcagtat ccgaggcaaa aattaagcgt ttgcataatg
    13321 tgcaacacct acgccgccaa attcaagcaa cgctcaaacc ggacacctca gattcagatt
    13381 gcttaagcaa aatccaccca actgcggcag ttgcagggct tccccgccaa aaagcaaagg
    13441 gttttattac cgaaaatgag ccttttaccc gccattggta tgcaggtaca ttaggcgtaa
    13501 tgggcaacga ggaagccgaa ttttgcgtaa cactccgttc tgcattaatt tcacaaaatt
    13561 caattacgct ttatgccggt gccggcattg tgtcaggctc agatccacaa tcggaatggc
    13621 aagaaattaa acgtaaggca caaggaatgg caaaactgtt ggatgttgat ttagtaacaa
    13681 aaggggaact gtaagctagg ctttcagaac ttaatctctt aattatttct ttctatattt
    13741 tcatttccaa cttccca
//
LOCUS       DANLTI010000074        13664 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.074, whole genome shotgun sequence.
ACCESSION   DANLTI010000074 DANLTI010000000
VERSION     DANLTI010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13664
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.074"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(102..1685)
                     /locus_tag="PXB09_001665"
     CDS             complement(102..1685)
                     /locus_tag="PXB09_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233771.1"
                     /translation="MKKQFEHNESRRGFMKLIAGVGAGMAFSGTLGTFTPKAFAAPAA
                     GSTIEAGIAYPISTGFDPLTSSGASSMAANLHIFEGLVDLHPATRKPYLALAAAEPEK
                     IDDVTYRITLRDGAKFHNGNPVTTEDVVYSFERVLDPAKASLFAQFIPFIDTVKKVDD
                     KVVEFKLKYPFALFKERLTIVKIVPKAVVEAGQAAFDANPVGTGPYKFVSATKDDRIV
                     FEAFADYNGGYPAQVEKMTWFLLSDDAARVTAQESGRVQAIESVPYLDAERLKRKGTV
                     ESVQSFGLLFLMFNCEKAPFNNPKVRQALHYGLDTQKLIDVVFLGNAKAATSYVQDTH
                     PDYVKANSQYDFDKAKAEALLAEAGVTELKFELLATDHSWVKECAPLILESWNSLKGV
                     KVSLKHLQSGALYGTHVDKGAYEVVIAPGDPSVFGNDLDLLLSWWYRGDVWPKRRFRW
                     SETAEYAEVQKLLDEAAKNPAASKEAWAKAINIIAEQVPLYPIIHRKLPTAWNDKALT
                     GFQPLPTTGMSFIGVGRAK"
     gene            1907..3064
                     /gene="hemW"
                     /locus_tag="PXB09_001666"
     CDS             1907..3064
                     /gene="hemW"
                     /locus_tag="PXB09_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDL5233772.1"
                     /translation="MNLILPPLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHL
                     LADLSQDLTAYRVAIGDRKLYSIFIGGGTPSLFSAEGIAYLLIEVEKRIAFEPNIEIT
                     LEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNS
                     AKSGLQSFNIDLMHGLPNQSVKQALADLETGISLNPPHLSWYQLTIEPNTMFYYRKPT
                     LPDDDELWDIFEQGHQLLTNAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAH
                     GKISYPTGEIYRFSKIKHPKGYMRGEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQE
                     FEWFTGLDREVVRPTIDWALNQNYISETATHWQITQHGKLFLNELLEGFLE"
     gene            3207..3689
                     /locus_tag="PXB09_001667"
     CDS             3207..3689
                     /locus_tag="PXB09_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5233773.1"
                     /translation="MIDKQIRNSTAEFLIFTQQNGAENITVRYEDNEIWLTQKLIAQL
                     FDCSTDNVSLHLKNIFNSRELDPNSVTEDFSVTAADVKNYRTKHYNFDAVISIGYRVN
                     SVRATQFRQWATKVLRNFAQKGYVIDRQRMENGTFLNEDYFEQLLAEIREIWLSERRS
                     "
     gene            3658..3855
                     /locus_tag="PXB09_001668"
     CDS             3658..3855
                     /locus_tag="PXB09_001668"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233774.1"
                     /translation="MKFGYLNGVLEGKGKMRFDEAKLHAESEFEKYRIVQDRLFESDF
                     DKVLKEMLRSENQYRPSFSTT"
     gene            3942..4409
                     /gene="bcp"
                     /locus_tag="PXB09_001669"
     CDS             3942..4409
                     /gene="bcp"
                     /locus_tag="PXB09_001669"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDL5233775.1"
                     /translation="MNILQAGDKAPKFTLQNQADEPVSLSQFAGKKVLVYFYPKALTP
                     GCTTQACGLRDSKSELDELNVVVLGISTDLPKKLAQFVEKKALNFTLLSDPDHQVAEA
                     FGVWGEKKFMGKTYDGIHRISFLIDEQGGGEQVFDKFKTGEHHQMIVDYLRGR"
     gene            4409..4957
                     /gene="gmhB"
                     /locus_tag="PXB09_001670"
     CDS             4409..4957
                     /gene="gmhB"
                     /locus_tag="PXB09_001670"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDL5233776.1"
                     /translation="MGKKAIFLDRDGTINIDHGYVHQIDDFQFIDGVGKALKQLQDKG
                     YLLVLVTNQSGIARGYFSEAQFMQLTEWMDWSLDEDYGVVLDGIYYCPHHPEGKGEYR
                     KDCDCRKPKAGMFTQAIQDLNIDPSQSYMVGDKLEDILAAEAAGVKTKVLVRTDKAVT
                     EEGQAKADLVLDSLVDLVKYIK"
     gene            4962..5801
                     /gene="queF"
                     /locus_tag="PXB09_001671"
     CDS             4962..5801
                     /gene="queF"
                     /locus_tag="PXB09_001671"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDL5233777.1"
                     /translation="MNYNDKSLSALKLGQKTEYKSEYDASLLQPVPRKLNRDSLGITQ
                     EQPFNRGADVWTCYELSWLNQNGLPQVAIADVAIDFKSENLIESKSFKLYLNSFNQTK
                     FSSIEEVGKTIQADLARCASGQVSVKIYQLSHYTQQPIVDFAGDCIDEQDIQIDSYAF
                     STHYLENIAEDELVEETLVSHLLKSNCLITSQPDWGSVQIRYKGKKLNREKLLRYLVS
                     FREHNEFHEQCVERIFCDLMQFAEPEKLTVYARYTRRGGLDINPFRSNFEEVPENLRM
                     ARQ"
     gene            5993..7126
                     /locus_tag="PXB09_001672"
     CDS             5993..7126
                     /locus_tag="PXB09_001672"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDL5233778.1"
                     /translation="MLIFMMNEYSPNYYIGVMSGTSLDGVDIALLDFAKNPPKMTACD
                     FFPMPEELRADISALLKTGETNLQKLGEIDHRLGLLYAETINAFLAKNQLKAEDIQAI
                     GCHGQTVWHSPDSEYPFTTQIGDMNLVAEQTGITTIADFRRKDMAVGGQGAPLVPAFH
                     QAIFSDPNRLTVVLNIGGISNISVLNPNSPTVGYDVGAGNTLMDSWIEQHQGKRYDKN
                     GEWARTGKLNTELLATLLDESFFAKAPPKSTGRELFNLTWLAKKLENLTACQPQDVQR
                     TLAEFTAQSIANELLRFESSLPRLLLVCGGGSRNPLLMERISALLPEWEVTTTTEFGL
                     DIDYVEAAAFAWLAYQRIHNLPSNMPSVTGAKKAVSLGVIYPA"
     gene            complement(7123..8181)
                     /locus_tag="PXB09_001673"
     CDS             complement(7123..8181)
                     /locus_tag="PXB09_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233779.1"
                     /translation="MAEILFRSCLCCNAKRIFYLLTFYKGFETSQIATAFSLLVFTSQ
                     AFSLFAGSWGDSFGRYPIMMLGCLLDALAYILLLTTKNYPLLLLATFFFGLGSTLFST
                     NARAFLLANIQDTGDSYQLKTKAQGKFLKVSSLSAMVAPLLTIPFIFYRKAEWLIWIS
                     CCIEIIMLFVMFKTAPKTHECANGQCERFKFGALKGILNEQFIFVHLLLFIPLGLGSA
                     FYIIFPYIFTNLLDKPELVSVSFFVNNLIAVLLQSDFSRKLNLTVHKLIYIAPILIIL
                     QIMPWFYALQWLSTITAFLYLVIFATITVYANTALSNMLVKLDNGKNQGLMFGSSKLI
                     LAITTLGVMNVLPYIFLI"
     gene            8264..8725
                     /locus_tag="PXB09_001674"
     CDS             8264..8725
                     /locus_tag="PXB09_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5233780.1"
                     /translation="MRKIKLLHVILSLILGLSAAAIGSYPAIKEIGEERAKKHQDILD
                     LNRELYSAMVNRDFSALQTLLSDDFELYSSTGEVIDKQEWIKLIQKRVLEFDKVDLLS
                     TDFQGNQSSGLLRVNGEFFGIERDNVVVEMNIRTIVRNTERQIKCIVIKEV"
     gene            8738..9631
                     /gene="murQ"
                     /locus_tag="PXB09_001675"
     CDS             8738..9631
                     /gene="murQ"
                     /locus_tag="PXB09_001675"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDL5233781.1"
                     /translation="MNALGQMITEQRNPNSMNIDRLSALDIVQVINQEDKQVAIAVEQ
                     CLPQIAQAVEKIVQAFEKGGRLVYVGAGTSGRLGVLDASECPPTYGVKPEMVVGLIAG
                     GERALRFPIEGAEDNREQGKVDLQAVNFSEKDVLVGIAASGRTPYVLGAMEYAKQLGA
                     TTVSIASNPNSAMAQIADIAIETVVGPEVLTGSSRMKSGTAQKLVLNMLTTASMILIG
                     KCYQNLMVDVQATNEKLKARAIRIVMQATECEREVAEDTLKLAENNAKLAIMMILGNL
                     DKQKAEDLLSQNQGRLQKALK"
     gene            complement(9715..10659)
                     /gene="prmB"
                     /locus_tag="PXB09_001676"
     CDS             complement(9715..10659)
                     /gene="prmB"
                     /locus_tag="PXB09_001676"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5233782.1"
                     /translation="MFKYNTELLDEISALPIVNDLVTIQDMMRWGYSYFNASDLYYGH
                     GYDNAWDEAQQLVLAGLYLPFDVPETLYSSRLTRVEKERIINLICERLGSRKPVAYLT
                     NSAWFCGGEYYVDERVIVPRSPIGELIKKGFKGIIKNEPHRILDMCTGSGCIAIACAE
                     RFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFPICSDLFNNLPQDKYDLIVTNPPY
                     VDEEDLGDMPEEFHHEPALALGSGKDGLDLTKRILAQAADYLNDDGVLVCEVGNSMVH
                     LIEQFPSVPFNWLEFEHGGLGVFSLTKEELVKHRHLFA"
     gene            10752..11297
                     /gene="smrB"
                     /locus_tag="PXB09_001677"
     CDS             10752..11297
                     /gene="smrB"
                     /locus_tag="PXB09_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDL5233783.1"
                     /translation="MNDTLLDDEFALFREAAKGTKKLTQNTFVPKAEPRKKLQELREL
                     KEKADTEFYFSDEYEPLLKEENEKVKYLREDVDPYILKQLRRGDFQPELFLDLHGLTR
                     EKAKKELAALILACEREKVYCASVMTGFGTRTLKDQIPRWLVQHPKVMALHQAPKEWG
                     GDASILILVEQPENPEKMFGR"
     gene            11361..11846
                     /locus_tag="PXB09_001678"
     CDS             11361..11846
                     /locus_tag="PXB09_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HDL5233784.1"
                     /translation="MSEQTFHQLTALLDSHRARYRVVGHPSAGKSEEVAKIRGTEIGQ
                     GAKALVCKVKGNGVKQAVLAILPADYQADLTKIAEHLGGLRASLASPAEVAELTDCVF
                     GAIPPFSFHPDLLLVAEPSLFERYAELAFNAGTLERSIILNTEDYQKIVNPVLVQFAK
                     S"
     gene            complement(11848..12597)
                     /locus_tag="PXB09_001679"
     CDS             complement(11848..12597)
                     /locus_tag="PXB09_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5233785.1"
                     /translation="MEKRFEINEQGLSIRCKLFYEKELQQIENVVIVLHGFGSSKDLK
                     SNTKFGERLSSKYKGYAALAFDFPCHGDDARKKLSVEESITYLQLVIDYAKTSLNAKN
                     LYAYGTSFGGYLTLKYLAEKGNPFRKIALRAPAVQIYHSLMNRLSEEERQKLAKGREI
                     LWGFDRQMKISQAFFDELTDITQNDYLDYAEQILILHGTEDEMVALSTSQQFADNNVI
                     ELLPIEGADHAFSNPKLMDIAIGKIVEFFAP"
     gene            12769..13632
                     /locus_tag="PXB09_001680"
     CDS             12769..13632
                     /locus_tag="PXB09_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDL5233786.1"
                     /translation="MLQLILAILCSVTVGVLIKFARQKGIRIDQSIAVNYIVTTTMTF
                     LLLKPDYQGQSITDIIANNPTSYIFVILSITLPTIFLVQAKALEFAGIIRTDAAQRLS
                     LFLPILAAFTIFGEQVTQNKLIALLLAFVALGCLLWKGNQGMEKGGKIAIISLALVWV
                     GYGVNDILFKQIAKSGSAFPVTLSIAFIGAGCFMFIYLLLKRTQWHVPSVLTGLLLGV
                     LNFGNILFYIQAHQAMKDDPTLVFTGMNLGVICLGTFVGAFFFKEKIHKVNYLGVAIA
                     IVAIICLFYWR"
BASE COUNT         4189 a         2585 c         2992 g         3898 t
ORIGIN      
        1 tgagtgatat aagacgaata ttacatcatt ttgattttta tttatgcaag cggtaaattt
       61 tttgtaaaat attaccgctt gcatttagct agccgttacg actatttagc acgaccaaca
      121 ccgataaatg acatacctgt tgttggtaat ggttggaaac ctgttaatgc cttatcattc
      181 cacgcagttg gcaatttacg gtgaataatt gggtaaagag gcacttgttc agcgataata
      241 ttgattgctt tcgcccaggc ttctttagaa gcagcaggat ttttggccgc ttcatcaagc
      301 agtttttgta cttctgcata ttcagctgtt tcagaccagc ggaaacgacg tttcggccat
      361 acatcaccac gataccacca gcttaataat aggtctaagt cattaccgaa aactgatggg
      421 tcgccaggtg caatcacaac ttcgtatgca cctttatcaa cgtgtgtgcc atataatgca
      481 cctgattgta agtgtttgag tgaaactttc acgcctttta agctgttcca cgattcaaga
      541 attaatggcg cacattcttt cacccaagag tgatcggttg ccaacaattc aaattttaac
      601 tctgtcacac ccgcttctgc taataacgct tcggctttcg ctttatcgaa atcatattgc
      661 gaatttgctt tcacataatc cgggtgagta tcttgcacgt aagatgtagc agcttttgca
      721 ttgcctaaga acaccacatc aattaatttt tgggtatcta agccataatg taacgcttgg
      781 cgaactttcg ggttgttaaa cggtgctttt tcacagttaa acattaagaa cagtaagccg
      841 aatgattgta ctgactcaac ggtaccttta cgttttaagc gttctgcatc taagtaaggc
      901 acagactcaa ttgcttgaac acggccagat tcttgagcgg ttacacgagc ggcatcatca
      961 gaaagtaaga accaagtcat tttctcgact tgtgccgggt agccaccgtt ataatctgca
     1021 aatgcttcga aaacaatacg atcatcttta gttgcggata caaatttata tgggccagtc
     1081 cccactggat tagcatcaaa tgcagcttga ccggcttcta ccactgcttt tggtacgatt
     1141 ttaacaatgg ttaggcgctc tttgaataac gcaaatggat atttcaattt gaattcaacc
     1201 actttgtcat caactttttt cacagtgtca ataaatggaa tgaattgtgc gaaaagtgat
     1261 gctttagctg ggtctaatac acgttcaaat gagtaaacta cgtcttcagt ggtaaccgga
     1321 ttaccattgt ggaatttagc cccgtcacgt aaagtaattc gataggttac atcatcaatt
     1381 ttttcaggct ctgctgctgc caatgctaaa tatggtttgc gagtggctgg atgtaagtcc
     1441 acgaggcctt caaaaatatg gaggtttgcc gccattgagg atgcaccgct tgaggtaagc
     1501 gggtcaaatc cggttgatat gggataagct ataccggcct caatcgttga gccggcggca
     1561 ggggctgcaa atgctttagg tgtaaatgta cctaaagtgc cactaaatgc cataccggca
     1621 ccgacacctg caattagttt cataaaacca cggcgggatt cgttgtgttc aaactgtttt
     1681 ttcatcttaa agctccttta agtttttatg ataggggcgg tattatttgc tgaagtgaat
     1741 ttatcaaaaa atgcactttt ttgaattgaa tttatcatat cattaatgtc aaagtggtaa
     1801 agcaagaatt attgaatttg tgatctagct cacgaaaatc tttgcttttc acttcacgtg
     1861 cttttcgtta ttattcgcca atttaatcat aaatgaaaaa ttgacagtga acctgatttt
     1921 accgccttta agcctttata tccatatccc ttggtgcgtg caaaaatgcc cttattgcga
     1981 ttttaactcg cacgctcaaa aaggattaat tcccgagcaa gaatatatcg aacatttact
     2041 tgcagattta tcccaagatt tgaccgctta ccgagtggca ataggtgatc gtaaattata
     2101 ttctattttt attggcggcg gcaccccgag cttattttca gcggaaggga tagcttattt
     2161 attaattgaa gtagaaaaac ggattgcatt cgagccaaat atcgaaatta cactggaagc
     2221 gaacccggga accgcagagg cagagcgatt tttaggttac gcacaaggtg gcgtaacccg
     2281 catttcaatg ggaatccaaa gttttgagcc ggaaaaatta ttgaaattag gacggattca
     2341 cgatgcaaat gaagcaaaac aagcgattaa atttgcccaa aattctgcaa aatcgggctt
     2401 gcaaagtttc aacattgatt taatgcacgg cttaccaaac caatcggtta aacaagcctt
     2461 ggcggattta gaaacaggga tttcactcaa tccaccgcat ttatcgtggt atcagctcac
     2521 gattgagccg aatacgatgt tctattatcg taagccaacc ttgcctgatg atgacgagtt
     2581 atgggatatt ttcgagcaag ggcatcaact tttaacgaat gccggctatg agcagtatga
     2641 aacctcggct tatgccaaaa aaggctacca atgcagacac aatttaaatt attggcgatt
     2701 tggggattat ttggcgattg gttgtggcgc tcacggcaaa atttcatatc cgaccgggga
     2761 aatttatcgc tttagcaaaa tcaaacaccc gaaaggttat atgcgaggtg aatatcgcta
     2821 cagccaagat ttgattgaat tagacgaccg cccgtttgag ttttttatga accgctttag
     2881 attacttgaa gcgacaccaa aacaagaatt tgaatggttt acagggttag acagggaagt
     2941 tgttcgcccg acaatcgatt gggcgttaaa ccaaaactat atttccgaaa ccgcaaccca
     3001 ttggcaaatt acccaacacg gtaaattgtt tttaaatgaa ttactggaag gatttttgga
     3061 ataatttgca aaaaaacgac taaaaaaaga ccgcattgta atgctaaatt acaggcgttt
     3121 tttgtgatct gcgtcgaaaa atcctcattt tttactagac aaaaaaacag tgtttagtag
     3181 catagccttc acaataagga gagcttatga tcgataaaca aatccgtaat agtaccgccg
     3241 aatttttgat ttttactcaa caaaatgggg cagaaaatat taccgttcgc tatgaagata
     3301 acgaaatttg gcttacgcaa aaattaattg ctcagctttt tgattgctca acagataatg
     3361 tttctttgca tttaaaaaac atttttaata gtagggaact cgatccaaat tcagttaccg
     3421 aggatttctc ggtaactgcc gcagatgtca aaaattatcg taccaaacac tacaactttg
     3481 atgccgttat ttcgataggc tatagggtaa actcggtgcg ggcgacacaa tttcgccaat
     3541 gggcaactaa agtattacgg aatttcgccc aaaaaggcta tgtgattgac cgccaaagaa
     3601 tggaaaatgg tacattttta aatgaagatt attttgagca gttgctggca gaaattcgtg
     3661 aaatttggtt atctgaacgg cgttcttgag ggcaaaggca aaatgcgttt tgatgaagcg
     3721 aaattgcacg cagaaagcga atttgagaaa taccgcattg ttcaagacag attatttgaa
     3781 agcgattttg acaaggtatt gaaagaaatg ttgcgttcgg aaaatcaata ccgtccatca
     3841 ttttcaacaa cataaaacaa ccgcattttg caaatttttt gccaagtttg accgcttgcc
     3901 gtgtataatg caagcggtta ttttttatgg aaaaattaca aatgaatatc ttacaagcag
     3961 gcgataaagc ccctaaattt acccttcaga atcaggctga cgagccggtt tctctctctc
     4021 aatttgccgg caaaaaagta ctggtttatt tttatccgaa agctcttaca cccggttgca
     4081 ctacgcaagc gtgcggactg cgtgacagca aatcagaact tgatgagctc aatgtggttg
     4141 ttctcggaat tagcaccgat ttaccgaaaa aattagctca atttgtagag aaaaaagcac
     4201 ttaattttac cttattatct gacccggatc accaagttgc agaagccttt ggtgtatggg
     4261 gcgaaaagaa atttatggga aaaacctatg acggcattca tcgcatcagt tttttaattg
     4321 atgagcaggg ggggggtgag caagtgtttg ataaatttaa aaccggcgaa catcaccaaa
     4381 tgatcgtgga ttatctacgg ggtcgctaat gggaaaaaaa gccatttttt tagaccgtga
     4441 cggcacaatt aatatcgatc acggctatgt gcatcaaatt gatgattttc aatttattga
     4501 cggtgtcggc aaggcgttaa aacagctaca agacaaaggt tatttattgg tgctggtaac
     4561 caatcaatct ggcattgccc gaggctattt tagcgaagca caatttatgc aactaaccga
     4621 atggatggac tggtcgctcg atgaagatta tggcgtggta ctagacggta tttactactg
     4681 cccacatcac cccgaaggca aaggcgaata ccgtaaagat tgtgattgcc gtaagcctaa
     4741 agcaggtatg tttactcaag cgattcaaga tttaaacatc gacccaagcc aatcttatat
     4801 ggtgggcgat aaattagaag atatccttgc cgcagaagcc gccggcgtga aaaccaaagt
     4861 gctggttcgc actgacaaag cagtgacgga agagggtcag gctaaagccg atttggtgtt
     4921 agatagttta gttgatttag taaaatatat taaataaagc aatgaattat aacgataaat
     4981 ccctttccgc cctgaaatta gggcaaaaaa ccgagtacaa aagcgaatat gatgcctcgc
     5041 ttttgcaacc tgttcctcgt aaattaaacc gtgatagttt aggcattaca caagagcagc
     5101 cttttaaccg aggggctgat gtgtggactt gctatgagct atcttggttg aaccaaaatg
     5161 ggctaccgca agtagcgatt gcagatgtcg ccattgattt taagagcgaa aacttaattg
     5221 aatcgaaaag tttcaagctc tatttgaaca gttttaacca aaccaaattt agctcaatag
     5281 aagaagttgg gaaaacgatt caagcggatc tggctcgctg tgcaagcggt caggtttcgg
     5341 taaaaattta ccaattatca cactacacgc aacagccgat agttgatttt gcaggcgatt
     5401 gcattgatga gcaagatatt caaatcgaca gttatgcgtt ttcgactcat tatttagaga
     5461 acattgcaga agatgagttg gtggaagaaa ccttagtcag ccatttgctc aaatctaact
     5521 gcttaattac gtcacagcct gactggggaa gtgtgcaaat tcgctacaaa ggcaaaaagc
     5581 taaaccgtga aaaactgtta cgttatttag tgtcgttccg tgagcataat gagttccacg
     5641 aacaatgtgt ggaacgcatt ttctgtgatt taatgcaatt tgccgagccg gaaaaattaa
     5701 cagtttacgc acgctacacc agacgaggcg ggctagacat caatccgttt agatcgaatt
     5761 ttgaggaagt gccggaaaat ctaagaatgg cacgccaatg attttgttgt tttttgttcc
     5821 cgtctgaacc gcctgagcgt gtttgaattg gtaggtaaat ttactctgag cggagcgaat
     5881 gtaaatttgc cgttaagcca attcaaacta agcgaggata gcggtgaagc tcgggttgcc
     5941 tttcttttgg ttacttttct ttggcaaagc aaagaaaagt aacaaatagc agatgttgat
     6001 ttttatgatg aatgaatata gcccaaatta ctatataggc gtaatgtccg gcacgagcct
     6061 tgatggggtg gatattgctt tgctggattt tgcaaaaaat ccaccgaaaa tgaccgcttg
     6121 tgattttttt ccaatgccgg aggaattacg ggcggatatt tctgcgttac ttaaaaccgg
     6181 cgaaaccaat ctccaaaaac tgggggaaat tgatcaccgt ttaggcttgc tttatgcaga
     6241 aacgatcaat gcgtttttag cgaaaaatca gctaaaagca gaagatattc aagccatagg
     6301 ttgtcacggg cagacggtgt ggcattcacc ggattctgag tatcccttca ccacccaaat
     6361 tggcgatatg aatttggtgg cagagcaaac cggtattacc actatcgctg attttcggcg
     6421 taaagatatg gcagtaggtg ggcaaggggc tccgcttgtg ccggcatttc atcaagctat
     6481 ttttagcgat ccaaatcgtc taacagtggt gctgaatatt ggcggcatca gcaatatttc
     6541 ggtgttaaat cccaattccc ctacagttgg ttatgatgta ggagccggaa atactttgat
     6601 ggatagttgg atcgaacaac atcaaggcaa aagatacgat aaaaacggcg aatgggcgag
     6661 aacgggcaag ctcaatactg aactgttagc gacgttatta gacgagtcgt tttttgctaa
     6721 agccccgcct aaaagcactg ggcgggagct gtttaattta acgtggcttg caaaaaaatt
     6781 ggaaaatttg accgcttgtc agccacaaga tgtgcaacgc acgctggcag aatttactgc
     6841 tcaaagtatt gccaatgagt tattacgctt tgaaagctct ctgcctcgct tgcttttagt
     6901 ttgtggtggt gggtcaagaa atccgttatt aatggaacgg atttctgctt tacttcccga
     6961 gtgggaggtt acaaccacta cagaatttgg tttagatatt gattatgtag aggctgccgc
     7021 ttttgcttgg ttagcttacc agcgaatcca taatttaccc agtaatatgc ctagcgtgac
     7081 aggagcaaaa aaagccgtga gtttgggcgt gatttaccct gcttagatta agaaaatgta
     7141 aggtaataca ttcattactc cgagagtggt aatagctaaa attaatttag agcttccaaa
     7201 cattaagcct tggtttttac cattgtctaa tttcactagc atattagata gtgccgtatt
     7261 cgcatacacg gtaatagtgg caaaaatcac taaatagaga aatgcagtga tggttgaaag
     7321 ccattggagt gcataaaacc aaggcattat ttgaagtata atcagtattg gtgcaatata
     7381 aataagttta tgtactgtca gatttaattt tcgtgaaaaa tcagattgca ataacactgc
     7441 aattaaatta ttcacaaaga atgagacaga gactaattct ggtttatcca gaagattggt
     7501 gaatatatag gggaatataa tataaaatgc acttcctaga ccaagcggaa taaaaagtaa
     7561 taaatgtaca aaaataaatt gttcatttag tattcctttt aatgcaccaa atttaaagcg
     7621 ttcgcattgc ccatttgcac attcatgtgt tttgggtgcg gttttaaaca taacgaatag
     7681 cataataatt tcaatgcagc agctaatcca aataagccat tctgctttac ggtagaaaat
     7741 aaatggaata gtaagtaatg gtgctaccat cgctgacagg cttgatacct tcagaaattt
     7801 accttgagcc ttagttttga gttggtaact atctccggta tcttgaatat tggctaataa
     7861 gaatgctctc gcattggtac taaataaggt gctaccgagc ccgaagaaaa aggtagcaag
     7921 taatagcaga gggtaatttt ttgttgtcag taataaaatg taagctaggg catcgagcaa
     7981 acagccaagc atcatgatag ggtaacgtcc aaaactatca ccccaagaac ctgcaaaaag
     8041 ggaaaatgct tggctggtaa agaccaacaa agaaaatgca gttgcaattt ggctggtttc
     8101 aaagcctttg tagaatgtaa gtagataaaa aatacgcttt gcattgcagc ataagcaaga
     8161 ccggaaaaga atttccgcca taaaatgata ttttggatat tcatagataa tatttaatga
     8221 gaaaaatgat ttctaatata actaaattta ataaggaagc acaatgagaa aaatcaaatt
     8281 attgcatgtt attttatctt taatattagg gctttctgcg gcagcgattg gaagttatcc
     8341 ggcaataaaa gagattggcg aggagcgggc aaaaaaacat caagatatat tagatttaaa
     8401 tagagaactt tatagtgcaa tggtgaaccg tgatttttcg gctttgcaaa cattactaag
     8461 cgatgatttt gagctttatt catcaacagg tgaagtgatt gataagcaag aatggatcaa
     8521 attaatccaa aagagagtat tggaatttga taaggttgat ttgctatcta ccgattttca
     8581 ggggaatcaa tcatctggat tattaagagt aaatggtgag ttttttggga tagagcggga
     8641 taatgtggtg gtagaaatga atattcgaac cattgtgaga aatacagaac gccaaattaa
     8701 atgtattgtg attaaagagg tttaagtgtc gcaactattg aatgccttag ggcagatgat
     8761 taccgaacaa cgtaatccga attcgatgaa tattgaccgc ctttcagcgt tagatatagt
     8821 ccaagtcatc aaccaagaag acaaacaagt agcgattgcg gtggagcagt gcctgcctca
     8881 aattgcacaa gcggtggaaa aaattgtgca agcctttgag aaaggtggac gattggttta
     8941 tgtcggtgcc ggcacgagcg gaagattagg ggtgcttgat gcttcggaat gtccgcccac
     9001 ttatggcgta aaacctgaaa tggtggttgg attaattgcc ggtggtgagc gggcattacg
     9061 tttcccgatt gaaggggcgg aagataatcg tgagcaaggc aaagtagatt tacaagcggt
     9121 caattttagc gaaaaagatg tattggtcgg gattgcagcc agtgggcgaa cgccttatgt
     9181 gttaggggcg atggaatatg ctaagcaact tggtgcgacc acggtgtcga ttgccagtaa
     9241 cccaaattcg gcaatggcac aaattgcgga tattgcgatt gaaaccgttg tcgggccgga
     9301 agtgctaacc ggttccagcc gtatgaaatc cggcacagct caaaaattgg tattgaatat
     9361 gctcactact gcgtcgatga ttttaatcgg taaatgctac caaaatttaa tggtagatgt
     9421 gcaagcaact aatgaaaaac tcaaagctag agcaattcgg attgtgatgc aagcgacaga
     9481 atgtgaacga gaagtggctg aagatacact aaaattagcc gaaaataacg ctaaattggc
     9541 aattatgatg attttaggta acttagataa gcagaaagcc gaagatttat taagccaaaa
     9601 tcaagggcga ttacaaaaag cgttaaaata gaagtatgtc tgctctcccc ttgtgggaga
     9661 gagacagatc aatcattcat tcagaatgat tgatcagaga gaggggaggc agatttaagc
     9721 aaataaatgg cgatgtttca ctagttcttc tttggttaaa ctgaacaccc ctaagccacc
     9781 gtgttcaaat tccagccagt taaacggcac actggggaat tgttcgatta aatgcaccat
     9841 actgttgccg acttcgcaga ctagcacgcc atcatcattt aagtaatcag cggcttgagc
     9901 aagaatccgc ttggttaaat ctaacccatc tttgcccgag ccaagagcta atgccggctc
     9961 gtgatggaac tcttcgggca tatcgcctaa gtcttcttca tcaacataag gcggattagt
    10021 cacaattaag tcgtatttat cttgcggtaa attgttaaac agatcggaac agatcgggaa
    10081 aactcggtga gacacctgat gacgctcaat attaatttga gcaacgtcta aggcatcaag
    10141 ggaaagatca accgcatcga cttctgcttc cggaaaacgc tcggcacagg caatcgcaat
    10201 acaaccgctg ccggtacaca tatctaaaat tcgatgtggc tcgtttttga taatgccttt
    10261 aaaccctttt ttgatcagct caccaatcgg tgaacgtggc acgatcacac gctcatcgac
    10321 ataatattca ccgccacaaa accaagccga gttggtaagg tatgctacag gtttgcgaga
    10381 gcctaaacgc tcacagatta aattgatgat acgttctttc tcaactcgag ttaagcgaga
    10441 ggaataaagt gtttccggta catcaaacgg caaataaagc cctgccaaca ctaattgttg
    10501 tgcctcgtcc cacgcattat cgtagccgtg cccgtaataa agatcagagg cattaaaata
    10561 gctatacccc caacgcatca tatcttgaat agtgactaaa tcattcacaa tgggcagggc
    10621 ggaaatttca tcaagaagtt cggtattata tttaaacatt ggcgtgcctt ttttcgtatt
    10681 gttaaaatgg ctgtgttata ccacattttg ctttgtgtta gaatgtaaaa atgaataaga
    10741 aggaaaagat aatgaacgat acgttattag acgatgaatt tgcattattc agagaggcag
    10801 caaaaggcac gaaaaagctg acacaaaata cctttgtgcc gaaagcggaa cctcgcaaga
    10861 aattgcaaga attgcgagaa ttaaaagaaa aagctgatac agaattttat ttctcggatg
    10921 aatatgagcc tttgctgaaa gaagaaaatg aaaaagtgaa atatctgcga gaagatgttg
    10981 atccttatat tctcaaacag ttacggcgag gcgatttcca acccgagctg tttttagatc
    11041 tgcatggttt aactcgagaa aaagcgaaga aagagttggc agcgttgatt ttagcctgtg
    11101 agcgggaaaa ggtatattgt gccagtgtga tgaccggctt tggcactcgc acgctcaaag
    11161 atcaaattcc acgctggttg gttcagcacc caaaagtaat ggcgttgcac caggccccga
    11221 aagagtgggg cggagatgcc tctattctaa ttttggttga gcagcctgaa aatcctgaaa
    11281 aaatgtttgg gcgttaaaat tcggctgaat tgccaatttt ttattaaaaa cgaccgcttg
    11341 tgtatcatta aggagaaatg atgtcagaac aaactttcca ccaacttaca gcattattag
    11401 attcgcatcg agctcgctat cgagtggtag gacatccttc tgccgggaaa tcggaagaag
    11461 tggcaaaaat tcgaggaaca gaaatcgggc aaggggcgaa agccttagtt tgcaaggtaa
    11521 aaggcaatgg ggtaaagcaa gctgtgcttg ctatattacc tgctgattac caagcggatt
    11581 taacaaaaat tgcagagcat cttggtgggt taagagcctc acttgccagc ccggctgaag
    11641 tggcagaatt gaccgattgt gtatttgggg caattccgcc gtttagcttt caccccgatt
    11701 tattattggt ggctgagcca agtctgtttg agcgttatgc tgaattagcc tttaatgccg
    11761 gtacgttgga acgttcgatt attctgaata ccgaggatta ccaaaagata gttaatcctg
    11821 tgttggttca attcgccaaa agctaggtta tggggcgaaa aactccacga ttttgccaat
    11881 agcgatatcc attaatttag ggttagaaaa agcgtgatct gccccttcaa tcgggagcag
    11941 ttcaatcacg ttattatcgg caaactgctg tgaagtgctt aacgccacca tttcatcttc
    12001 cgtgccgtgc agaattaaaa tttgctcggc ataatccaaa taatcgtttt gggtaatatc
    12061 ggttagctca tcaaaaaagg cttggctgat tttcatctgg cgatcaaacc cccacaaaat
    12121 ttctcgccct ttggcaagtt tttgccgttc ctcttctgac aagcggttca ttaacgaatg
    12181 gtagatttgt actgccggtg cccgcaatgc aattttccga aacggattgc ctttttccgc
    12241 cagatatttc aaggttaaat agccgccaaa actagtgccg taggcataca gatttttagc
    12301 attcaggctg gttttggcat aatcaatcac cagttgcaga taagtaatgg attcctcaac
    12361 cgagagtttt ttacgggcat catcaccgtg gcaagggaaa tcaaaggcaa gggcagcgta
    12421 gcctttatat tttgagctaa ggcgttcccc aaatttggta ttcgatttca gatctttaga
    12481 cgaaccaaag ccgtgcaaca caatcactac attctcgatc tgctgcaatt ctttttcata
    12541 aaacagttta cagcgaatgc tgagaccctg ttcattaatc tcaaagcgtt tttccatttt
    12601 atgttaagta ttgaaattga agatgacaaa attttagcac tatttgagtg caagcggtcg
    12661 gatctctcgc aaaatttgca aattttccgg taaatttaac cgcttgtact agccaaaatt
    12721 taagcatatt tatagaatac agccttcgtt tttaaaagga gaaatgaaat gttacaactt
    12781 attttagcga ttttatgtag cgtgactgta ggcgtgttga ttaaattcgc ccgccaaaaa
    12841 gggattcgta tcgaccaaag tattgcggtg aactatatcg tgactaccac gatgacgttt
    12901 ttattactaa aaccggatta ccaagggcag tcgattaccg atattattgc taataacccg
    12961 acttcctata tttttgtgat tttaagtatc acattgccta ctattttctt ggtgcaagca
    13021 aaagccctag agtttgccgg tattatccga accgatgcgg cacaacgttt atcgctgttc
    13081 ctgccgattt tggcggcatt caccattttt ggtgagcagg ttacgcaaaa taaattaatt
    13141 gcacttctgt tagctttcgt ggcactcggt tgcttattat ggaaaggcaa tcagggaatg
    13201 gaaaaaggcg gaaaaattgc gattatcagc cttgctctgg tttgggtagg ctatggcgtg
    13261 aacgatattt tatttaaaca gattgccaaa tcaggctctg ctttccctgt caccctttcg
    13321 attgccttta tcggtgcagg ctgttttatg tttatctatt tgctacttaa acgcactcaa
    13381 tggcacgttc caagtgtctt aaccggctta ttgctaggcg tgttgaactt cggcaatatt
    13441 ctgttctata ttcaagctca ccaagccatg aaagatgacc caactttagt cttcactgga
    13501 atgaacttag gggtaatttg cttaggcact ttcgttggag cattcttctt taaagagaaa
    13561 atccacaaag tgaactactt aggcgtggcg attgcgattg tggcgattat ttgcttgttt
    13621 tattggcggt aaatatactt tccaaaatta agggcgaaca taat
//
LOCUS       DANLTI010000075        13610 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.075, whole genome shotgun sequence.
ACCESSION   DANLTI010000075 DANLTI010000000
VERSION     DANLTI010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13610
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.075"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(25..1564)
                     /locus_tag="PXB09_001681"
     rRNA            complement(25..1564)
                     /locus_tag="PXB09_001681"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(1918..3879)
                     /gene="recD"
                     /locus_tag="PXB09_001682"
     CDS             complement(1918..3879)
                     /gene="recD"
                     /locus_tag="PXB09_001682"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDL5233787.1"
                     /translation="MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVL
                     AAALVSYQVGLGHTALRLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVL
                     KNHIAFSYSPETIKPMLFQNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSI
                     LNQLFTGKAQTIDWQKIAVATALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQK
                     PYLQIALAAPTGKAAARMKESLESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTE
                     KTKYHTKNPWHYDLVVLDEASMIDLSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSI
                     MGELGSFIDNGYSQSHCDYLKAVTDYQIEAGNALPIGDCLSHLKHSYRFGEKAWIGEL
                     ANAVNDQKINLSWEIFDKYKNSDKLENFCYPETKETTDKSSWIEKSVQMVVDKAVELY
                     RDYLQAVQKREKNPDSVSVKAIFEKFQKVRILSALRVSELGVERLNMAIAEGLRKASL
                     VKFNHSRDRYIGKPILMTENMPINSIASGDVGIILPDENGESRVYFDSLQENREHHSL
                     PLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHSISPVLTKELIYTAITRAKDKFTLF
                     GSEKVWKYSVGAKTERQSGLKEQIRGKFS"
     gene            4009..5133
                     /gene="alr"
                     /locus_tag="PXB09_001683"
     CDS             4009..5133
                     /gene="alr"
                     /locus_tag="PXB09_001683"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDL5233788.1"
                     /translation="MKPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLP
                     AAGTLADMVDGFGVARLREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHN
                     LEQLELLEQVAKEWQAEQQKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVE
                     RLKNCALVNSISFVSHFSRADELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYW
                     KQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWV
                     SPKDTKLGVTAMGYGDGYPRNAPEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKV
                     GDKAIFWGEQLLIEDVAKHIGVISYELITKLTPRVIFEYK"
     gene            complement(5196..5837)
                     /gene="sodA"
                     /locus_tag="PXB09_001684"
     CDS             complement(5196..5837)
                     /gene="sodA"
                     /locus_tag="PXB09_001684"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDL5233789.1"
                     /translation="MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALE
                     AHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA
                     IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLEEGKLAVVSTANQDNPLMGKEVAGVS
                     GYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEKVATCGCAK"
     gene            6281..8737
                     /gene="thrA"
                     /locus_tag="PXB09_001685"
     CDS             6281..8737
                     /gene="thrA"
                     /locus_tag="PXB09_001685"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDL5233790.1"
                     /translation="MRVLKFGGTSLANPERFMQAAEIIEKAHLADQAAGVLSAPAKIT
                     NHLVAIVDKAIAGESFQSNLSEATEIFHNIINGLYATNNHFAKEALLALVEAELNQIQ
                     QVAAEAAQTKSLSDKIAATIHCRGEKLSIAMMQAWFEAKGYEVTRIDPVEKLLAHGSY
                     LESSVDIAESTKRVDAGSIPKKNIVLMAGFTAGNEQGELVLLGRNGSDYSAACLAACL
                     KADVCEIWTDVDGVYTCDPRLVPDAVCLETMSYQEAMELSYFGAKVIHPRTIGPLVPL
                     NIPCLIKNTGNPDGKGTLIDGNVANDNLKVKGITNLDNVAMFNVSGSGMQGMVGMAAR
                     VFSTMSKAGISVILITQSSSEYSISFCVPAKSAEKALAALNTEFAQELSENLLDPIDI
                     IKDLSIVSVVGDGMRTAKGIAARFFSALAQANISIVAIAQGSSERSISAVVPLNKAIE
                     AVKATHKSLFNSKRVVDMFLVGVGGVGSELIEQVKQQKEFLAKKDIEIRVCALANSDK
                     MLLNENGLNLDNWKEDLEKAIQPSDFDVLLSFIKFHHVVNPVFVDCTSAQSVANLYAR
                     ALKEGFHVVTPNKKANTSGYDYYLEMRENARQSQHKFLYETNVGAGLPVIENLQNLLA
                     AGDEVEKFEGILSGSLSFIFGKLEEGLTLSQATLIAKEKGFTEPDPRDDLSGADVARK
                     LLILVRETGLPLEFEDIEIEGVLPKGFSEGMSRDEFLQALPSLDEEFSKRVEAAKAEG
                     KVLRYVGSITGDKCRVAIEAVDENHPLYKVKDGENALAFLTRYYNPIPLLLRGYGAGN
                     SVTAAGIFADILRTLQGGVN"
     gene            8737..9684
                     /gene="thrB"
                     /locus_tag="PXB09_001686"
     CDS             8737..9684
                     /gene="thrB"
                     /locus_tag="PXB09_001686"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDL5233791.1"
                     /translation="MALRIYAPASSANISVGFDSLGAAISPIDGSLLGDVVQIEESEQ
                     QFELESAGYFVRKLPKEPQKNIVYQAYVLFSERLKLRNGSVKNLRLTLEKNMPIGSGL
                     GSSACSIVAALVALNKFHDEPFSKMELLEMMGELEGRISGSIHYDNVAPCYLGGLQLM
                     TQSLGNICQPLPFFDEWYWVLAYPGVEVSTAEARAILPKSYTRQDMIQQARYLGSFVH
                     ACHTHQDILAATMMKDLIAEPYREDLLPNFPAVRQGCKDLGALAVGISGSGPTMFAIA
                     PDLEHAQRLVSYLEKEYLQNNEGFIHICKVDNQGARELK"
     gene            complement(9799..11175)
                     /gene="cysS"
                     /locus_tag="PXB09_001687"
     CDS             complement(9799..11175)
                     /gene="cysS"
                     /locus_tag="PXB09_001687"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDL5233792.1"
                     /translation="MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTF
                     VSFDVIARYLRYSGYNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDA
                     LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNL
                     EQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELG
                     EHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFS
                     IRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIG
                     EHYVEAFKTAMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGL
                     LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTP
                     NGTIWRKA"
     gene            11331..11840
                     /locus_tag="PXB09_001688"
     CDS             11331..11840
                     /locus_tag="PXB09_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5233793.1"
                     /translation="MITLHTNFGDIKIELNFEKAPITAKNFEDYAKEGFYNGTIFHRV
                     IDGFMIQGGGMTAGMAEKPTKDPIQNEANNGLSNKRGTIAMARTSDPHSASSQFFINV
                     ADNTFLDYRSKEMFGRSVVQDWGYAVFGEVVEGMDVVDKIKGVKTGNKGFHQDVPVED
                     VVIESVSVA"
     gene            complement(11932..12861)
                     /locus_tag="PXB09_001689"
     CDS             complement(11932..12861)
                     /locus_tag="PXB09_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5233794.1"
                     /translation="MEIALLLADKILQLTLMVLLGYLIVKTKLLKSEHSYPISVIGLY
                     IISPAMLITAFQVDYTTEILNGLYLAFLISVLLNGLLILLGWLLKRALKLDNIEQATA
                     IYSNSGNLIIPIVASLFGNEWVIYSTAFIVVQNVLFWSHLRLLICGKGNVPFRKMIFN
                     INIIAIVIGMMLFLLHIKLPATLANTLSTLGHMLGPLAMLVAGMLIAAIPFKEIITDK
                     RIYLVAFLRLIFIPLILLAVIKLGGFASWIENGKTVVMITFLATISPSAATATQMAVA
                     YGQDAKKASAIYGVTTLLCVFTMPLIIWLYQFL"
     gene            complement(12864..>13610)
                     /gene="fdhD"
                     /locus_tag="PXB09_001690"
     CDS             complement(12864..>13610)
                     /gene="fdhD"
                     /locus_tag="PXB09_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDL5233795.1"
                     /translation="DDEENLISEVPVALVYNGISHTVMMATPANLEDFALGFSLAEGI
                     LNAPSELYGLDVIEQENGVEIQLEISSRQFVALKDKRRSMAGRTGCGICGVEQLEQVN
                     QSCKIVKKNNRLQNVNPLILEDCLLQLENAQFLSKETGASHAAAFFTPDGKLLAIRED
                     VGRHVALDKLIGWYAKADFPIGFVFVTSRASFEMVQKCLAVGIEMLCAISATTEMAVN
                     MARENQFTLLAFARKGKATIYAGEERLALN"
BASE COUNT         3867 a         3055 c         2769 g         3919 t
ORIGIN      
        1 acttgctgtc gttctcgatt ttggtaagga ggtgatccaa ccgcaggttc ccctacggtt
       61 accttgttac gacttcaccc cagtcatgaa tcataccgtg gtaaacgccc ccctttcggt
      121 taagctatct acttctggta caacccactc ccatggtgtg acgggcggtg tgtacaaggc
      181 ccgggaacgt attcaccgca acattctgat ttgcgattac tagcgattcc gacttcatgg
      241 agtcgagttg cagactccaa tccggactta gacgtacttt ctgagattcg ctccccatcg
      301 ctggctcgcc gccctctgta tacgccattg tagcacgtgt gtagccctac tcgtaagggc
      361 catgatgact tgacgtcatc cccaccttcc tccggtttat caccggcagt ctcctttgag
      421 ttcccgacct aatcgctggc aacaaaggat aagggttgcg ctcgttgcgg gacttaaccc
      481 aacatttcac aacacgagct gacgacagcc atgcagcacc tgtctcatgg ttcccgaagg
      541 cactctcata tctctacaag attccatgga tgtcaagagt aggtaaggtt cttcgcgttg
      601 catcgaatta aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc atttgagttt
      661 taaccttgcg gccgtactcc ccaggcggtc gatttatcac gttagctacg ggcaccagag
      721 ttaaacccca atccccaaat cgacagcgtt tacggcgtgg actaccaggg tatctaatcc
      781 tgtttgctcc ccacgctttc gcacatgagc gtcagtacat tcccaagggg ctgccttcgc
      841 cttcggtatt cctccacatc tctacgcatt tcaccgctac acgtggaatt ctacccctcc
      901 ctaaagtact ctagttgtcc agtctgaaat gcaattccca ggttaagccc ggggctttca
      961 cacctcactt aaacaaccgc ctgcgtgccc tttacgccca gttattccga ttaacgctcg
     1021 caccccccgt attaccgcgg ctgctggcac ggagttagcc ggtgcttctt ctgtgattaa
     1081 cgtcaatcga ctgttctatt aaaacaatcg ccttcctcgt caccgaaaga actttacaac
     1141 ccgaaggcct tcttcattca cgcggcatgg ctgcatcagg gttcccccca ttgtgcaata
     1201 ttccccactg ctgcctcccg taggagtctg gaccgtgtct cagttccagt gtggctggtc
     1261 atcctctcag accagctaga gatcgcgggc ttggtgagcc tttacctcac caactaccta
     1321 atcccacttg ggctcatctt atggcaggtg gccaaatggt cccacccttt agtcctaaga
     1381 cattacgcgg tattagctac cgtttccagt agttatcccc ctccataagc cagattccca
     1441 agcattactc acccgtccgc cactcgtcac ccaaggagca aactcctatg tgctaccgtt
     1501 cgacttgcat gtgttaagcc tgccgccagc gttcaatctg agccatgatc aaactcttca
     1561 attcaaaaag tttaatcgct caatactgct gacataaaat cgcacttcca aatttaaacc
     1621 taattaaaat taagttaaaa gaaagtaatg aatttctagt tagcacctat taagacttca
     1681 aaattaaaaa aatgtttttc aatcaagtca atcaacaagt gcccacacag attgtctgat
     1741 aaattgttaa agaacaaaaa gaaacgacgc actggaaatc aattttaaat cgttcacaac
     1801 agtgcgtcgt tgtgtgctgc gtattatagg gaaaaacaaa aacaacgcaa gcggtttttg
     1861 taaaaaattt gaaaaaaatg accgcttgcg tatttttacg gcaaaacgag tattaattta
     1921 gctaaacttg cctcttattt gttcttttag cccactttgt ctttcggttt tggcaccaac
     1981 actgtatttc caaacttttt cgctaccaaa taaggtaaat ttatcttttg cccttgtgat
     2041 tgcggtgtaa atcaactctt tcgtcagcac cggggaaatc gaatggggca acaccaatac
     2101 cgtatgttca aattcagaac cttgcgattt atgcacagtc ataatataag ctgcttcata
     2161 atttgaaacc ctacctagag gcaaactatg gtgttctcta ttttcctgta aggaatcaaa
     2221 ataaactcgg ctttctccat tttcgtccgg caaaatgatg ccgacatcac cgctggctat
     2281 gctatttatc ggcatatttt ctgtcattaa aatcggtttt ccgatatagc ggtctcggct
     2341 atgattaaat ttcactaagc tagctttccg caagccttcc gcaatcgcca tattaagacg
     2401 ttcaaccccc agttcactta cccttaaggc tgataaaatt cggacttttt gaaatttctc
     2461 aaaaatcgct ttcacactca ctgaatctgg atttttctcc cgtttttgaa ccgcttgtaa
     2521 ataatcacga taaagttcaa ccgctttatc caccaccatt tgcacacttt tttcaatcca
     2581 gcttgattta tccgttgtct ctttcgtttc cggataacag aaattttcta acttatcact
     2641 gtttttatat ttgtcgaaaa tctcccacga aaggttaatt ttttgatcat ttactgcatt
     2701 tgcaagctct ccaatccagg ctttttcgcc aaatcgatag ctatgtttta agtgagataa
     2761 acaatcacca atcggcaacg cattaccggc ttcaatttgg tagtcggtaa cggcttttaa
     2821 gtaatcgcaa tgggattggc tataaccatt atcaataaaa gagccaagtt cccccataat
     2881 tgaaccagct tccacagaag caagctgatc tttatctccc agcattatca agcgagagtt
     2941 tggtttgagc gcttgaacaa ctttctccat cattgataaa tcaatcattg aagcctcatc
     3001 taatacgacc aaatcatagt gccacggatt tttggtatga tatttggttt tctcagttaa
     3061 tggtctcgca ccaagcaagc gatgaatagt cactgcttca gttggaatag agcgttttaa
     3121 ctcctcagat aacccctttt cttccgccaa cttgctttcc agcgactctt tcattcttgc
     3181 tgctgctttt ccggttggtg cagccagagc gatttgcaaa tatggtttct gtagtgcttg
     3241 ctgttttaat tgcagcccga gtaataattt tactaccgta gttgtttttc cggttcccgg
     3301 cccacctgaa attaagctaa actgcttttc taatgctgtt gcaacggcaa tcttttgcca
     3361 gtcgatagtt tgagctttcc cagtgaatag ttggttgaga atgctttggt ttaattcggt
     3421 atttgcaaat ttttccgaaa aatcaaccgc ttgttgtaaa taaccggcaa tgcgatgctc
     3481 cgcttgccag tagcgataaa aatagagcaa gctgttttgg aataacatcg gtttaattgt
     3541 ttcgggagaa tagctaaaag cgatatgatt tttcagcaca ctctgccatt caagcggtgg
     3601 aatttgctca attttttgca aaatttgttc gagcaaatga taagtttgtg gcttgctatt
     3661 taattcaaaa agagaagaaa gactgagatt ttccaaacgt aatgccgtat gcccaagtcc
     3721 cacttggtaa gaaaccaacg cagcggctaa cacagctaaa tcttgctcca aaggcgaata
     3781 cccatagggt ttctgcttat tatcaataaa acgggcaaat tgataattta agtcagaaat
     3841 cgccttttct tgtttaagtt ccaataataa attcagcata atcaaacctt aaatcgacca
     3901 cctaacatta agtgataata ctaatctttt ttgcattatt ttctaaggga ttttttattt
     3961 taggcgtata atttagcctt tcttgtgatt ttaactatgt agataagtat gaaaccagca
     4021 acagcaacca ttgatagtca agccctccgc cataatattc gcctgatcaa atctttcgct
     4081 ccacagcaaa aattattggc gatgatcaaa gccaatgctt acgggcaagg cttattgccg
     4141 gctgccggca cattagcaga tatggttgat ggctttggag ttgcccgttt gcgtgaagcc
     4201 ttagaaattc aagaaaccgg atacacaggc aaaattgtgt tagttgaagg tttttttgac
     4261 cgagaagagc tactcaaaac cctttcccgc aagtttgata ccgtcattca taacctcgaa
     4321 caactggaat tactcgagca agtagcaaaa gaatggcagg cagagcaaca aaaaggcttt
     4381 tggactcgta aagcgaaaat ctacttcccg attaacattt ggctaaaaat cgacaccgga
     4441 atgcaccgct taggcattca cccggagcaa gtcgatcact ttgttgaacg tttgaaaaat
     4501 tgtgccttgg tcaattcaat cagctttgtg agtcatttta gccgtgccga tgaactcgat
     4561 tgtggctata ccgaaaaaca aattgcggtg tttgagcaag ctacgcaaaa atatcaggat
     4621 cacgaccgca gtatttccgc ctcaagcggt attctttatt ggaaacaggc tcattatgat
     4681 tgggttcgcc cgggtattat tatgcacggc atttctcccc actatacgcc gattaccgat
     4741 ttaggtttta agccggtaat gacgctctcc tcttccctga tcgctgtgcg tacccataaa
     4801 gccggcgagc ctgtaggcta tggtggtgct tgggtaagcc ctaaagatac caaactcggc
     4861 gtgactgcaa tgggctacgg cgatggctac cctcgcaatg ctcctgaagg tacccctgtg
     4921 ttgattaacg gtagaatagt gccgattgtc ggtcgagttt cgatggatat gctgacggtc
     4981 gatttaggtg cagagagcca agataaagtg ggcgataaag ccattttttg gggagagcaa
     5041 ctattaattg aagatgtggc gaaacacatt ggcgtgatta gctatgagct gattactaaa
     5101 ctcactcctc gtgtgatttt tgaatataaa tagacaacaa gcggtaaaat tttcaacaaa
     5161 ttttaccgct tgtatcttat tcaagatcga aaatattatt tcgcacaacc gcaggttgct
     5221 actttttctt caaaacggcg agcggcttcg tcccagttta caacgttcca gaatgcttta
     5281 atgaaatccg gacggcggtt ttggtagttt aagtagtaag cgtgttccca aacgtctaag
     5341 actaaaatcg gatagcctga aacgcctgcc acttctttac ccattagtgg gttgtcctgg
     5401 ttagcggttg aaacaacggc taatttaccc tcttctaata ctaaccacgc ccagcctgaa
     5461 ccaacacgag tagtcgctgc tttttcaaat tctgattgga aagcttcaac tgaaccgaaa
     5521 tcacgctcaa tcgcttcttt taatgcacct tgtaaggtag tgcctgtttt taaacctttc
     5581 cagaataaag tgtggtttac atgaccacct acgttgttac gcactgcaat acgtttttct
     5641 gcaggcactt ggctcaaatc tttgattaat gcacccggac atttttctaa taattcaggg
     5701 tgagcttcta atgctgcatt tgcattgttg atgtaagctt ggtgatgttt agaatggtgg
     5761 atttccattg ttttagcatc gaaatgtggc tctaacgcat cataagcgta gcctaattct
     5821 ggtaatgtat atgccatagt taattcctct caaatagtaa ataggttaat cagagttaaa
     5881 ctccgagtac attttatcaa gaaacacaca aaaaatgcac atttttttga tctagaacaa
     5941 aattatttca ctatctaatt tagaaaggtt cctaatcaaa ttcttgcttt taattgtttt
     6001 atatagaaag acaaagaaat ttaaaaaaat gtggtgaaaa acagcgttaa gcccattgac
     6061 aaaggcatta ttttcacgca ttcttgaacc attattcact ctcttgaccg agattccgcc
     6121 aatgaattgt tttaatatga tgacaacgat tattaccacc attatgtcac caacatagtg
     6181 cgggttttaa ttggctgaaa taatgaaaga ataaaccgaa aacccgctac aagcgggttt
     6241 ttttgtataa aaatttacaa ataatttatc aggagtaact atgcgagttc ttaaatttgg
     6301 aggcacttct cttgccaacc ctgaacgctt tatgcaagcg gcagagatta tcgagaaagc
     6361 tcatttggca gatcaagctg ccggcgtatt atccgcccca gccaaaatta ccaatcatct
     6421 tgtcgctatt gtagataaag cgattgccgg tgaatcattt caatctaacc tttctgaagc
     6481 taccgagatt ttccacaaca tcattaacgg cttatatgct acaaataatc actttgctaa
     6541 agaagcactg ttagccttag tggaagcgga attaaaccaa attcagcaag tggctgcaga
     6601 agcagctcaa actaaatcgt tgtcagataa aattgctgcc actattcact gccgtggtga
     6661 aaaactctct attgcgatga tgcaagcgtg gttcgaggca aaaggctatg aagtcactcg
     6721 tatcgaccct gttgaaaaat tattggctca cggcagctat ttggaatctt cggtcgatat
     6781 tgccgaatcc accaagcgag ttgatgcagg ttcaattcca aagaaaaata tcgtgctaat
     6841 ggctggtttt accgcaggta atgagcaagg cgaactggtg ttattagggc gtaacggttc
     6901 agattattct gccgcttgtt tggcagcgtg tttaaaagcc gatgtttgtg aaatctggac
     6961 ggacgtagat ggcgtttaca cctgcgaccc tcgtttggtg cctgatgcag tatgcttaga
     7021 aacaatgagc tatcaagagg caatggagct ttcctacttt ggggcgaaag tgatccaccc
     7081 tcgcaccatc gggccattag tgccgctcaa tattccttgt ttaatcaaaa ataccggcaa
     7141 tccggacgga aaaggcacat taattgatgg caatgtggca aacgataatc tcaaagtaaa
     7201 agggattacc aaccttgata acgtggcgat gttcaacgtt tcaggttcag gaatgcaggg
     7261 aatggtgggc atggctgccc gtgtgttctc gacgatgtca aaagccggta tttcggtgat
     7321 tttaattacc caatcatcat cagaatatag catcagcttc tgcgtgccgg caaaatcggc
     7381 agaaaaagcg ttagcggctc taaatactga atttgcacaa gagttatctg aaaacttact
     7441 tgacccgatt gatattatta aagatttatc cattgtttcg gtagtgggtg atggtatgcg
     7501 taccgccaaa ggaattgcgg ctcgcttctt ctctgcccta gcccaagcca acatcagtat
     7561 tgtggcaatt gcacagggtt catctgagcg ttccatttct gctgtcgtgc cgttaaacaa
     7621 agcgattgaa gcagtaaaag caactcacaa atcgctattt aacagtaaac gtgtggtgga
     7681 tatgttttta gtgggtgtag gcggtgtggg tagcgaactc atcgagcaag tcaaacaaca
     7741 aaaggagttt ttggcaaaga aggatattga gatccgtgtg tgtgctttag ctaattcaga
     7801 taaaatgtta ctcaacgaaa acggcttaaa tttagacaac tggaaagaag atttagaaaa
     7861 agcaattcag ccgtcagact ttgatgtatt gctttctttc atcaaattcc accacgtggt
     7921 aaacccagta tttgtagatt gcacttcggc acaatcggtg gcgaacctgt acgcacgagc
     7981 cttaaaagag ggcttccacg tggtaacacc aaacaaaaaa gccaatacat caggttacga
     8041 ttactactta gaaatgcgtg aaaacgcccg ccaaagccag cacaaattcc tctacgaaac
     8101 taatgtaggg gcaggtttac cggtaattga aaacttacaa aacctattag ctgccggtga
     8161 cgaagtagag aaatttgaag ggattttatc cggctcgctc tctttcattt tcggcaaatt
     8221 agaagaaggt ttaacccttt cgcaagcaac tttaatcgcc aaagaaaaag gctttaccga
     8281 gccagatcca cgagatgatt tatccggtgc agatgttgct cgtaaactct taattcttgt
     8341 tcgtgaaacc ggcttaccgc ttgaatttga agatattgaa attgaaggcg tattgccaaa
     8401 aggcttctcg gaaggaatga gtcgtgatga gtttttacaa gctctaccgt ctttagacga
     8461 agaattcagc aagcgtgtag aagctgccaa ggctgaaggc aaagtgttgc gttatgtggg
     8521 ctcgatcaca ggtgataaat gccgagttgc cattgaagcc gtggacgaaa accacccact
     8581 ttacaaagtt aaagacggcg aaaatgccct tgcttttctc acacgttact acaaccctat
     8641 tccattatta ttgcgtgggt atggtgcggg caatagcgta accgctgccg gtatctttgc
     8701 agatattctg cgtactttac aaggaggagt gaactaatgg cgttacgaat ttatgcccca
     8761 gcttcaagtg caaatattag tgtgggtttt gactcattag gcgctgcaat ctccccgatt
     8821 gacggctctt tgctcggcga tgtagttcaa attgaagaga gtgaacaaca atttgagcta
     8881 gaaagtgcag gttattttgt acgtaaattg cccaaagaac cacaaaaaaa cattgtctat
     8941 caagcctatg tgctatttag cgaacgcttg aaattacgta acggcagtgt aaaaaattta
     9001 cgcttaacac ttgaaaaaaa tatgccgatt ggctcagggc taggctcaag tgcctgctcg
     9061 attgttgcag cattagtggc actcaataaa ttccacgatg aaccgttctc caaaatggaa
     9121 ttactggaaa tgatgggcga attggaaggc agaatttcag gctcaatcca ctacgacaac
     9181 gttgcccctt gctatttagg tggcctgcaa ttaatgacac aatcgctcgg caatatttgc
     9241 caacctctgc cattctttga tgaatggtat tgggtgcttg cctacccggg cgtggaagta
     9301 tcaaccgccg aagcccgtgc tattttgccg aaaagctata ctcgtcaaga tatgattcag
     9361 caagcccgct acttaggatc tttcgtccat gcttgccata cacatcaaga tatcttggct
     9421 gctacaatga tgaaagacct aattgctgag ccttaccgtg aagatttact gccgaacttt
     9481 ccggctgttc gtcaaggctg taaagactta ggtgcgttag cggttggtat ttcaggttcc
     9541 ggtccgacaa tgtttgcgat agcccctgat ctcgaacacg ctcaacgttt agtgagctat
     9601 ttagagaaag aatatctgca aaacaacgaa ggctttattc atatctgtaa agtcgataat
     9661 caaggagcaa gagagctgaa atagccctct cgaacaacca tatcactaaa taacttaaag
     9721 gactgactcc aataccactt ggagcagccc tttttgatta attttttgaa aagtctatca
     9781 cttataaaca atcgaaggct atgccttacg ccaaattgtg ccgtttgggg tgtcttcgag
     9841 gacaatattt atcgctttga gcttatctcg cacttcatcg gcaaccgccc agtttttagc
     9901 cgctttggct tcgttgcgtt gtttgattaa ggcttcgatt tctgccgttt catcgtcatt
     9961 cgcatcacct tttaaaaacg catcggggtc ttgttccagt aagcctagca cgccggctaa
    10021 ctcttttaaa cgaacggcta aaccgttggc ttttgccata tcttcggttt tgagtttgtt
    10081 caactcacgg gcaatttcaa ataacaccgc taatgccccc ggggtgttga aatcatcgtc
    10141 cattgcggtt ttaaaggctt ctacatagtg ttctccgatg gcttcgcccg acacatcaca
    10201 accacgcaga gcggtatata aacgctcaag agccgaacgg gctaaatcaa ggttgtcaat
    10261 gctgtaatct aataacgaac ggtaatgagc ggttaagaag aaataacgta acgattcggc
    10321 atcgtataag cctaacatat ggcgaatgct gaagaaattg cccaaagatt tcgacatttt
    10381 ttctttatca atggtaagca ttccagtgtg taaccaataa ttgacataat cgccaccgtg
    10441 agcacagcaa gattgtgcaa tttcgttttc gtgatgcggg aacattaaat ccgagccacc
    10501 gccgtgaata tcaaaatgtt cgcccaactc tttgctattc attgccgaac attcaatatg
    10561 ccagcccggt ctgccattgc cccacgggct ttcccagctt ggctcaccgg ctttcgacat
    10621 tttccacaag acaaaatcca tcgggttttt cttgatggat ttaatttcaa cccttgcacc
    10681 ggcttgtagt tgctctaaat tttggcggga taatgcacca tatttctgga acgattccac
    10741 atcaaacatc acatcgccat cggctgcgac ataagcgtgt ccgttgtgaa tcagtttttc
    10801 taccatcgca ataatttcag gaatatgctt ggtggctcgt ggctcaacgt ccgggcgaag
    10861 aatgtttaac gcatcaaaat ctttgtgcat ttcagcaatc attctatcca ctaattcatc
    10921 gcaagtttcg ttattttcta acgcacgttt gatgattttg tcgtccacat cggtaatgtt
    10981 acgcacatag cgtaaattgt agcctgaata acgtaaataa cgggcaatca catcgaaaga
    11041 gacaaaagtg cgaccgtgcc caaaatgaca aagatcgtaa accgtgacgc cacagacgta
    11101 cattcccacc tgatttgggt taatcggttt aaattcttct ttttcacgtt ttaaggtgtt
    11161 ataaattttg agcataaagt cctcttgtgt aacattcagt aacaaatggg gctaagtata
    11221 gcgaataagc ggtctgattt tgagattttt ttgcaatttg gcgtaaactt tttaataata
    11281 gcgagcgaaa tttattttcc attccatttt tatttataaa ggaacaaaga atgattacat
    11341 tacataccaa tttcggtgac attaaaatcg aattaaactt tgaaaaagcc ccgattaccg
    11401 ctaaaaactt tgaagattac gctaaagaag ggttttataa cggcacgatt ttccaccgtg
    11461 tgattgacgg ctttatgatt caaggtggcg gaatgacggc aggtatggct gaaaaaccga
    11521 caaaagatcc gattcaaaac gaagcgaaca acggtttaag caacaagcgt ggcacaatcg
    11581 caatggctcg cacttctgat ccgcattctg cttcgtcaca gtttttcatt aatgtggcgg
    11641 ataatacttt cttagattat cgctcaaaag agatgttcgg cagaagtgta gtgcaagatt
    11701 ggggctatgc agtatttggc gaagtggttg aaggtatgga cgtggtcgat aaaatcaaag
    11761 gcgtaaaaac cggcaataaa ggcttccacc aagacgtgcc ggttgaagat gtggtgattg
    11821 agtctgtaag cgttgcctaa ttccgcaaat tagcctacaa gcggttgatt tttcacaatt
    11881 ttttgcattt ctcagcgttg caaaaaagta gcagaaatcg actgcttgtt tttatagaaa
    11941 ttgatacagc caaataatca gcggcattgt aaacacacaa agtaaagtgg ttacgccata
    12001 aatcgcactg gcttttttgg catcttgccc gtaagccacc gccatttggg tcgccgttgc
    12061 agcagaaggg ctgatggtgg ctaagaatgt aatcattacc accgtttttc cattctctat
    12121 ccagctcgca aaaccgccga gtttaatcac cgctaacaaa atcagcggaa taaaaatcaa
    12181 gcggagaaaa gccaccaagt aaatgcgttt atcggtaata atctctttaa atggaattgc
    12241 tgcaattaac atccctgcca caagcattgc taaaggccct aacatatgcc ctaaagttga
    12301 gagcgtgttt gcaagcgtag cgggcagttt gatatgtagc aaaaacaaca tcataccaat
    12361 cacaatcgca ataatgttga tattaaagat catctttcta aacggcacat tgcctttgcc
    12421 acaaatcagc agccgtaagt gagaccaaaa caacacattt tgcaccacaa taaaagccgt
    12481 tgaataaatc acccattcat tgccgaacag ggaggcaaca atcggaataa ttaagttgcc
    12541 ggagttggaa taaatagcgg tggcttgttc tatgttgtct aatttcaacg ctcttttgag
    12601 cagccaacca agcagaatta acaagccgtt taataagacg gagattaaaa atgccagata
    12661 caagccgttt agtatttcgg tggtgtaatc tacttgaaaa gcagtaatca gcattgccgg
    12721 gctgataatg taaagtccga taaccgaaat cggataactg tgctccgatt tgagtaattt
    12781 agttttaacg atgaggtagc cgagcagcac catcagggtt aattgtagaa ttttatcggc
    12841 taataaaagg gctatttcca ttatcaatta agagcgagtc tctcttctcc tgcataaatg
    12901 gtcgctttgc ctttgcgggc aaaagcaagt aaggtaaatt gattttcacg agccatattc
    12961 actgccattt cagtggtcgc tgagatggca cacaacattt caatgccaac ggctaagcat
    13021 ttctgcacca tttcaaagct ggcacgactg gttacaaaca caaatccaat cggaaaatca
    13081 gctttagcat accaaccgat taatttatcc aacgccacgt gtctgcccac atcttcacga
    13141 atggcaagca gttttccatc cggggtaaaa aatgcagcgg cgtggcttgc accggtttct
    13201 ttcgataaga attgagcatt ttctagctgt aataaacaat cctctaaaat cagtggattg
    13261 acgttctgca agcggttatt tttcttaaca attttgcaac tttgattaac ctgctctaat
    13321 tgctctacac cgcaaatacc gcaacctgtt ctgcctgcca ttgagcggcg tttatctttt
    13381 aatgcaacaa attggcggct cgatatttca agctgaattt ctactccatt ttcttgttca
    13441 attacatcta aaccatataa ttccgatggg gcatttaaaa tcccttccgc caatgagaat
    13501 cctaaagcga agtcctccaa attagccggt gttgccatca ttacagtatg agaaataccg
    13561 ttatatacca aagcaaccgg cacttctgaa attaaatttt cttcatcatc
//
LOCUS       DANLTI010000076        13542 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.076, whole genome shotgun sequence.
ACCESSION   DANLTI010000076 DANLTI010000000
VERSION     DANLTI010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13542
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.076"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..413
                     /locus_tag="PXB09_001691"
     CDS             <1..413
                     /locus_tag="PXB09_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233796.1"
                     /translation="LYPISPIDITGSALFSLNDKNIPLLNYTPNSYMGRLVNRKLANT
                     IQLKTKTKFISSMSELLKNMVLNHQGIAWLPEYSISEELHNKKVIILDKNELVIPIKS
                     YIYRMNTRLNNAAERFWNNLQNIQFINEDILNKP"
     gene            complement(498..1847)
                     /locus_tag="PXB09_001692"
     CDS             complement(498..1847)
                     /locus_tag="PXB09_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5233797.1"
                     /translation="MLLFIMFAAIILLLVLIMKFKVHAFVALIIVSLLTALAAGIPVD
                     KILPTLLNGFGSTLASVALLVGLGAMIGRLLEITGGAKVLADTLINKFGKERAPFALG
                     VASLLFGFPIFFDAGLVVMLPIIFSVAKQFGGSVLRYAFPSAGAFAVMHAFLPPHPGP
                     VASGDLLGVNMGLLVLVGLVCAIPTWYIGTYLFSQFISKRIHVDLPKAFLNGLSANEM
                     AVQNPPSFGKVLTVLVLPIILILFDTGLNTLSVAKVIDGSEMWVQSLRLIGKTPVALL
                     ITLIVAIMLLRDNRSFDQIEKICNNALGPICSIVLVTGAGGMFGGVLRASGIGDVLSE
                     MMKDTGMPIVVAAFIIATVFRVAQGSATVALTTTAALIAPTVAAATDLSQFDLCFIVI
                     AIASGATVLSHVNDSGFWLMSRFLEMDEKTTLKTWTMLETAIGLTGFACALIGSWLL"
     gene            2034..2549
                     /locus_tag="PXB09_001693"
     CDS             2034..2549
                     /locus_tag="PXB09_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDL5233798.1"
                     /translation="MANGKAFILMGVSSTGKTSVGTAVAQRLGIKLIDGDDLHPRANI
                     LKMASGTPLNDADRTPWLERINDAVFSFEQKSEKGIIVCSALKKKYRDQIRQGNADVT
                     FLFLHGSFELVLARMQQRKGHFMKPEMLQSQFNTLEIPQADEPDVIFIDIDGSFDEVV
                     ERCVKAVEPLL"
     gene            complement(2603..3602)
                     /gene="gntR"
                     /locus_tag="PXB09_001694"
                     /pseudo
     CDS             complement(2603..3602)
                     /gene="gntR"
                     /locus_tag="PXB09_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674159.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
     gene            complement(3695..4855)
                     /locus_tag="PXB09_001695"
     CDS             complement(3695..4855)
                     /locus_tag="PXB09_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDL5233799.1"
                     /translation="MIEQSYKIALLFNANKIYDRGVMQGIGQFIQASQCTWDIFVEDD
                     FVYHKNSIESLSIDGIIADFDDLETVELLKDIDVPIVAVGGSYQNPDYYPDLPYVATD
                     NYALVEAAFLHLKQKGINQFAFYGYPAETEKHWAIERKNAFIQLMEKYEHHPNCYIGD
                     QFHSDNWVELQAKLGEWLQTLPAHTGIIAVTDARARHLLQTCEHLKIAVPEQLCVIGI
                     DNEELIQYLSRVSLSSVTQGTSQIGYHAVKLLYRKLNNLPVSTKPILIPPVKVEERRS
                     TDYRSLQDPMVIQAMHFIRHRACQGIKVEQVLDHLKISRSNLEQRFKQEMNKTIHQVI
                     HEEKLARATYMLKFTEISTQEIANVCGYPSLQYFYAVFKKEFGKTPKEFRQE"
     gene            complement(4978..5364)
                     /gene="rplQ"
                     /locus_tag="PXB09_001696"
     CDS             complement(4978..5364)
                     /gene="rplQ"
                     /locus_tag="PXB09_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDL5233800.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMASALVEHEIIKTTLPKAKEL
                     RRVVEPLITLAKADSVANRRLAFARTRNVDTVAKLFNELGPRFAQRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRPEVATEAAAE"
     gene            complement(5400..6389)
                     /gene="rpoA"
                     /locus_tag="PXB09_001697"
     CDS             complement(5400..6389)
                     /gene="rpoA"
                     /locus_tag="PXB09_001697"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDL5233801.1"
                     /translation="MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTL
                     NKSGIGPVTAADITHDGDVEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLH
                     TQNDDRPIGRLLVDARFSPVDRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIR
                     RAATILAEQLAAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED"
     gene            complement(6420..7046)
                     /gene="rpsD"
                     /locus_tag="PXB09_001698"
     CDS             complement(6420..7046)
                     /gene="rpsD"
                     /locus_tag="PXB09_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDL5233802.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHG
                     ARKPRLSDYGSQLREKQKVRRIYGILERQFRNYYTEANRLKGNTGENLLVLLEGRLDN
                     VVYRMGFAATRAEARQLVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKAS
                     LELATQREKPTWLEVDATKMEGVFKRRPERSDLSADINEHLIVELYSK"
     gene            complement(7075..7464)
                     /gene="rpsK"
                     /locus_tag="PXB09_001699"
     CDS             complement(7075..7464)
                     /gene="rpsK"
                     /locus_tag="PXB09_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDL5233803.1"
                     /translation="MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAW
                     ATAGGSGFRGSRKSTPFAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(7481..7837)
                     /gene="rpsM"
                     /locus_tag="PXB09_001700"
     CDS             complement(7481..7837)
                     /gene="rpsM"
                     /locus_tag="PXB09_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDL5233804.1"
                     /translation="MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVK
                     IRELSEEQIEKLREEVGKFTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(7975..8088)
                     /gene="rpmJ"
                     /locus_tag="PXB09_001701"
     CDS             complement(7975..8088)
                     /gene="rpmJ"
                     /locus_tag="PXB09_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDL5233805.1"
                     /translation="MKVRASVKRMCRNCKVIKREGVVRVICSDPKHKQRQG"
     gene            complement(8113..9432)
                     /gene="secY"
                     /locus_tag="PXB09_001702"
     CDS             complement(8113..9432)
                     /gene="secY"
                     /locus_tag="PXB09_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDL5233806.1"
                     /translation="MAKQPGYQGSTQKGTGELKSRLLFVLGALIVFRIGSFIPVPGID
                     ASVLSELIRQQQGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLTAIHPPLA
                     ELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISLALPNMVHGLVPNPSILFYVTSVVS
                     LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPATIGQTIEQARQGELSFIVLL
                     LVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMMAPARTSHLPLKVNMAGVIPAIF
                     ASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLYVVLFTMAVIFFAFFYTGMQY
                     NPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIGALYIAFVCLVPYIITSLW
                     KVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSQQYDSVLKKANLKGLN"
     gene            complement(9435..9869)
                     /gene="rplO"
                     /locus_tag="PXB09_001703"
     CDS             complement(9435..9869)
                     /gene="rplO"
                     /locus_tag="PXB09_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDL5233807.1"
                     /translation="MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGG
                     GVRRGFEGGQMPLYRRLPKFGFTSLKSFHVAEIRLNDLAKVDGNEVTLETLKAANIIT
                     KDILSAKVILAGKIERAVVVKGLRVTKGAKAAIEAAGGSIEE"
     gene            complement(9874..10050)
                     /gene="rpmD"
                     /locus_tag="PXB09_001704"
     CDS             complement(9874..10050)
                     /gene="rpmD"
                     /locus_tag="PXB09_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDL5233808.1"
                     /translation="MAKIKVTQTRSSIARLPKHKATLKGLGLRHIRHTVELEDTPAVR
                     GMINQVSYMVKVEE"
     gene            complement(10057..10557)
                     /gene="rpsE"
                     /locus_tag="PXB09_001705"
     CDS             complement(10057..10557)
                     /gene="rpsE"
                     /locus_tag="PXB09_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDL5233809.1"
                     /translation="MSNIEKQAGELQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNG
                     RVGFGHGKAREVPAAIQKAMEKARRNMINVALNEGTLQHPVKGSHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALENMKSPEMVAAKRGKT
                     VEEILG"
     gene            complement(10572..10925)
                     /gene="rplR"
                     /locus_tag="PXB09_001706"
     CDS             complement(10572..10925)
                     /gene="rplR"
                     /locus_tag="PXB09_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDL5233810.1"
                     /translation="MDKKVARIRRASRARHLMREQGATRLVVHRTPRHIYAQVIAPNG
                     SEVLAAASTVEKVIKEQVKYTGNKEAAAVVGKIVAERAIAKGIKAVAFDRSGFKYHGR
                     VQSLADAAREAGLQF"
     gene            complement(10940..11473)
                     /gene="rplF"
                     /locus_tag="PXB09_001707"
     CDS             complement(10940..11473)
                     /gene="rplF"
                     /locus_tag="PXB09_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDL5233811.1"
                     /translation="MSRVAKAPVNIPAGVEVKLNGQLLTVKGKNGELSREIHNAVEVK
                     QEADALTFAPREGIANADAQAGTARALVNNMVIGVTEGFTKKLQLVGVGYRAQMKGNA
                     VALSLGFSHPVEHTLPAGVTGECPSQTEIILKSADKQLIGQVAADIRAYRKPEPYKGK
                     GVRYSDEVVRTKEAKKK"
     gene            complement(11490..11882)
                     /gene="rpsH"
                     /locus_tag="PXB09_001708"
     CDS             complement(11490..11882)
                     /gene="rpsH"
                     /locus_tag="PXB09_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDL5233812.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKVAISMPSSKLKVAIANVLAEEG
                     YIESVKVVEGVKPELEITLKYFQNKPVVESIQRVSRPGLRIYKRKDELPKVMGGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(11919..12224)
                     /gene="rpsN"
                     /locus_tag="PXB09_001709"
     CDS             complement(11919..12224)
                     /gene="rpsN"
                     /locus_tag="PXB09_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDL5233813.1"
                     /translation="MAKQSMIARDVKRAKLADKFYAKREELKKIISDVNASDEDRWAA
                     VLKLQTLPRDSSPIRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(12236..12775)
                     /gene="rplE"
                     /locus_tag="PXB09_001710"
     CDS             complement(12236..12775)
                     /gene="rplE"
                     /locus_tag="PXB09_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDL5233814.1"
                     /translation="MAKLHDYYRDTVVNELKAKFNYSSVMQVPRIEKITLNMGVGEAL
                     TDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLNAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA
                     KTDEEGQALLAAFNFPFRK"
     gene            complement(12793..13104)
                     /gene="rplX"
                     /locus_tag="PXB09_001711"
     CDS             complement(12793..13104)
                     /gene="rplX"
                     /locus_tag="PXB09_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDL5233815.1"
                     /translation="MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITK
                     HEKPVPALGKAGGLVKKEAAIDVSNVAIFNPETNKADRVGFRFEDGKKVRFFKSNEKT
                     I"
     gene            complement(13115..13486)
                     /gene="rplN"
                     /locus_tag="PXB09_001712"
     CDS             complement(13115..13486)
                     /gene="rplN"
                     /locus_tag="PXB09_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDL5233816.1"
                     /translation="MIQEQTMLDVADNSGARSVMCIKVLGGSHRRYAAIGDIIKVTVK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGAVIRFDGNACVILNNNTEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
BASE COUNT         3937 a         2992 c         2632 g         3981 t
ORIGIN      
        1 aactttaccc tatttcccca atagacatta caggatctgc attatttagt ttaaacgata
       61 aaaacatacc attattaaat tatacaccaa attcctatat gggacgctta gtgaatagaa
      121 agttagctaa tacgattcaa ttaaaaacaa aaacaaaatt tatttcatca atgtctgaat
      181 tattaaaaaa tatggtacta aatcatcaag gcattgcatg gctccctgaa tattctatta
      241 gtgaagaatt acacaataaa aaagtaatca tactagacaa aaatgaatta gttattccaa
      301 taaaaagtta tatttacaga atgaatacga gactaaataa tgcagcagaa aggttttgga
      361 ataatttaca aaatattcag tttataaatg aagatatatt aaataaaccc taacattcta
      421 taataagaaa aagcggtcga ttctctgcca aattttgcaa attttagaag aaaacagacc
      481 gcttgtcagg gttggaatta gagtaaccag ctgccaatca atgcacaggc aaaaccggtt
      541 aaaccgatgg cagtttcaag cattgtccac gttttgaggg tagttttttc gtccatttca
      601 aggaaacggc tcatcagcca gaaaccggag tcattgacgt gggaaagcac cgtcgcaccg
      661 gaggcgatag caatcacgat aaaacagagg tcgaactggc ttaaatcagt cgctgccgcc
      721 acagttggcg caatcaacgc tgctgtggtg gttaaagcaa cggttgccga gccttgtgcg
      781 acacggaata ccgtagcaat aataaaggcg gcaaccacaa tcggcattcc ggtgtctttc
      841 atcatttccg ataatacatc gccaatcccg ctggcacgca acacgccacc aaacattccg
      901 cctgcaccgg ttactaagac aatcgagcag attgggccaa gggcattgtt acagattttt
      961 tcgatttggt cgaaactgcg attatcccgc aacagcataa tcgccacaat taaggtaatc
     1021 agtaaagcaa caggggtttt gccgattaag cgaaggctct gcacccacat ttcactgcca
     1081 tcaatcactt tagcaacgga gagggtattc aagccggtat caaacaaaat caggataatc
     1141 ggcagcacca acaccgtgag taccttgcca aaacttggcg ggttttgtac tgccatttcg
     1201 tttgccgata agccgtttaa aaacgctttc ggcaaatcaa cgtgaatgcg tttgctgata
     1261 aattggctga acaggtaagt gccgatatac cacgttggga ttgcacaaac caagcccacc
     1321 aagactaaca gccccatatt cacaccaagc agatcgccgg aggcaaccgg gccggggtgc
     1381 ggaggtagaa aggcgtgcat taccgcaaac gcaccggcag acggaaacgc atagcgcaac
     1441 accgaaccgc cgaactgttt tgccacgcta aaaataatcg gtaacatcac caccaagccg
     1501 gcatcaaaga aaatcgggaa gccgaataac agcgaggcaa cgcccaacgc aaaaggcgca
     1561 cgttctttgc cgaatttatt gataagcgta tccgcaagca ctttcgcccc gccggtgatt
     1621 tcaagcaagc gaccaatcat cgccccaagc cccaccagta acgccactga tgccagcgta
     1681 ctaccaaaac cattcaacaa tgttggcagg attttatcta ccggaatacc ggcagctaat
     1741 gcagtgagca ggctcacaat aatcaatgcc acaaaagcgt ggactttaaa tttcataatc
     1801 agcaccagca ataaaatgat ggcagcaaac ataatgaaca gtaacatagg atctcctaag
     1861 gttgaattgt tatcggtaac ataaccaaaa agcagtttag agtaaacggt tgcagggctt
     1921 ttattttaaa aatgtgatct acttcaagtt ttctggaaat agcagatgat ttttcagcat
     1981 aacctgttac attaacggct aagttaacgt taccagtaac acaaggaaat tcaatggcaa
     2041 acggcaaagc atttattttg atgggcgtgt ccagcaccgg caaaaccagc gtgggaacgg
     2101 cagtcgcaca gcggttggga ataaaattga ttgatgggga cgacttacac cctcgtgcca
     2161 atatactgaa aatggcaagt ggcacgccac tcaatgatgc agatcgcaca ccgtggttgg
     2221 agcggattaa cgatgcagtg ttcagttttg aacaaaaaag cgaaaaaggg attatcgtct
     2281 gctcagcatt gaagaaaaag taccgagacc agatccgaca aggcaatgcc gatgtgactt
     2341 ttctattctt gcacggctcg tttgaactgg tgctggctcg aatgcaacaa cgcaaagggc
     2401 attttatgaa accggaaatg cttcaaagcc aatttaatac gctggaaatt ccgcaggcag
     2461 acgaaccaga tgtgatattt attgatattg acggcagttt tgacgaggtg gtggagcgtt
     2521 gcgtgaaagc agttgagccg ttgctttaat cacaagtggt ggattttgcg gatttttttg
     2581 caaatttaac cgcttgtccg ggctacacac tttcccccaa atggatctga tagcccaagt
     2641 taattatgga gctttgttgt ggtacgccgt gaatacggtt gagcagctct tgggcggcaa
     2701 ctctgcctat ttcaaggcga ggtgtgatga cgctggcaag ctgtggcgtg agggattgcc
     2761 cgacatcgtg tccgtgaaag ccggcgattt taatctgctg cggcacatga atgcctaacc
     2821 gttggcactc aaataatgcc ccgattgcca aatcgtcatt ggtgcaaaaa atgccgtcta
     2881 gctgcggaat gtgttgcagg gcttgtttta gctggcttgc gccaagcgtg aaagaagaat
     2941 gctctgcagt agtaatgctg tgtgggctta agccgtgttt gagcattgcc tgttcgtagc
     3001 cctgcatttt cagctgagag cgtttatcca ttctcgcccc gaaatacacc acctgtcggc
     3061 agcctcgatg aatcattgtc tcgaccattg cttgagccgc agaaatattg tcaatatccg
     3121 accgcttgtt gaatgccaca ttcgccgctt tccattatct caatcaccgg aatattcgcc
     3181 acttccagca ttttcaaggt gcggggcgag tggtgatttt ccgataagat aatgccgtca
     3241 atattgtacg aaagcagcga ctcaatccgc tgctcttcct tttgttcgct gtaaccatag
     3301 tgggcgagca tggtttgata gctggcttgg tcggtaatct gctcaatgcc tttaatcaca
     3361 tcggcaaaca cttgattggt aagcgaagga accagcacgc caattgcacg gcttttggca
     3421 ttcgagagaa tatccggtgc acggtttggg atatagccaa acagctcaat cgcttgtgca
     3481 atccgctcgc cggtctcctt ggcaacggtg tttggatccc gcaaaaagcg actgaccgtc
     3541 attttggtaa tgccgagatg ggtagcgatg tcttgcaaag ttgggcgttt cggttttctc
     3601 attggaatag ataacgaaaa aatttaattt cgctgattat aactgaagat aaggcaataa
     3661 ttgcaaaata ttcggtgaaa ttgaccgctt gttactactc ttgcctgaac tctttcgggg
     3721 ttttaccaaa ctctttttta aacacggcat agaaatattg taaagaggga taaccgcaca
     3781 cattggcaat ttcttgggtc gaaatctcgg taaatttgag catatatgtt gctcttgcta
     3841 atttttcctc gtgaatcacc tggtgaattg tcttattcat ttcctgctta aaacgctgtt
     3901 caaggttaga gcgggaaatt ttaagatgat ccagtacttg ctctacttta atgccttggc
     3961 aagctcggtg acgaataaag tgcatagctt ggattaccat tgggtcttgc aaagaacgat
     4021 aatcggtcga acggcgttct tccactttta ccggcgggat taaaatcggc ttggttgaaa
     4081 ccggtagatt atttaatttt cgatataata acttcacagc gtgatagccg atttgtgatg
     4141 ttccttgtgt gactgaagaa agagaaaccc gagagaggta ttgaatcaac tcttcgttat
     4201 caatgccgat cacgcaaagt tgttcaggta cagcgatttt taaatgctca caggtttgaa
     4261 gcaggtgtct tgcccttgcg tcagtaacgg caataatgcc cgtgtgggct ggtaaggttt
     4321 gtaaccactc gcctaatttg gcttgtaatt caacccaatt atctgaatga aattgatcac
     4381 caatataaca atttgggtga tgttcatatt tttccatcaa ctgaataaag gcattttttc
     4441 gctctatcgc ccaatgtttt tccgtttctg caggatagcc gtaaaacgca aattggttga
     4501 ttcctttttg ttttaggtgt aaaaatgctg cctcaactaa ggcgtaattg tcggtagcaa
     4561 cataaggaag gtcagggtaa tagtcagggt tttggtaaga accgcctact gctacaatgg
     4621 ggacgtcaat atctttaagt agctcaactg tttccaaatc gtcaaaatcg gcaataatgc
     4681 cgtcaatcga caggctttcg atactatttt tatgatagac aaaatcatct tccacaaaaa
     4741 tatcccaagt acattgtgat gcttgaataa actgcccaat gccctgcatt actcctctgt
     4801 cataaatttt gttagcatta aaaagtaagg caattttata agattgttct atcattactt
     4861 cctccagtac ccactttcaa aagtaactat aaaataaaat tattttttga tcaaaacgaa
     4921 taaaagaata aaaccccggt atttctacca gggttttaag ctcaattttg attaagatta
     4981 ttccgcagct gcttcagttg caacttctgg gcgatccact aactcaatgt aagccattgg
     5041 agcattatca cctgcacgga aaccacattt taaaatgcga gtgtaaccac ccgcacgttg
     5101 tgcaaaacgt ggacctaatt cattgaataa tttagcaact gtatcaacgt tgcgtgtacg
     5161 ggcaaaagct aaacggcgat ttgcaacgct gtctgcttta gctaaagtaa ttaacggctc
     5221 aactacacgg cgtaactctt tcgcttttgg taaagttgtc ttgatgattt cgtgttcaac
     5281 aagcgcactt gccatattac ggaacatcgc ttggcgatgg ctgctgttac ggtttaattg
     5341 acgtccactc ttacgatggc gcataaccta ttccttctta gaaaatctat accgaaaaac
     5401 tagtcttctg caatacttgc aggtggccag ttttcaaggc gcataccgag tgataaacca
     5461 cgagaagcaa gaacatcctt aatctctgta agagattttt tacccaagtt cggggtttta
     5521 agaagttcaa cttctgtacg ttgtactaaa tcaccgatat agtgaattgt ctctgctttc
     5581 aaacagttag cagaacgaac tgtcagctct aggtcatcta ctggacgaag aagaatagga
     5641 tcaaattccg gtttttcttc tttcacttca ggttgacgaa catcacgcaa atcaacgaat
     5701 gcagcaagtt gttctgctaa aatcgttgca gcacgacgga tagcttcttc aggatctaac
     5761 gttccgttag tttccatctc aataacaagt ttatctaagt ctgtacgttg ttcaacacga
     5821 gcagcttcga cattgtaagc aatgcgatct acaggtgaaa aacgtgcatc tactaataaa
     5881 cgaccgatag ggcggtcatc gttttgagta tgaagacgtg ctgatgcagg aacataacct
     5941 cgaccacgtt gaacacgaat gcgcatatta attgatgcat tcttatctgt taaatgacag
     6001 attacgtgat caggattcac aatttctaca tcgccatcgt gtgtgatgtc ggctgcagtt
     6061 acagggccaa ttccagattt atttagtgtc aaaataatat catctttatt ttgcactttt
     6121 accgctagac ctttaaggtt taataatacc tcaagaatat cttcctgaac gccttctttg
     6181 ctgctgtact catgcagtac accatcaatt tcaacttcag taactgcaca acccggcata
     6241 gatgaaagta aaatgcggcg aagtgcgtta cctaatgtat ggccaaaacc acgctctaac
     6301 ggctctaatg tcactttagc atgagttgaa ctaacttgtt caatatttac taagtgcggc
     6361 tttaaaaatt ctgtcacaga accctgcatt ttttcctctc tttgcggtta agctaactat
     6421 tatttagagt aaagctcaac gatcagatgt tcattaatat ctgctgatag atcagaacgc
     6481 tctggacgac gtttaaatac gccttccatt ttagttgcat caacttctaa ccaagttggt
     6541 ttttcacgtt gagttgctaa ttctaatgat gctttaatac gtgcttgttt tttcgatttt
     6601 tcacgaacag caacaacatc atcaacagaa acttggaatg aaggaatgtt tactacacga
     6661 ccgtttacta cgattgattt atggctaaca agctgacgtg cttctgcacg tgttgctgca
     6721 aaacccatac gataaactac gttatctaaa cgaccttcca ataatactag taagttttca
     6781 ccggtattac cttttaagcg gttcgcttct gtataataat tacggaattg acgctctaag
     6841 ataccataaa tacggcgaac tttttgtttt tcacgtaatt gactaccata gtcagataaa
     6901 cgtggcttgc gagcaccatg ttgaccaggc gctacatcaa gtctatttct acattttgat
     6961 tcaatcgcac gaacgcctga ttttaagaat aaatcagtac cttcacgacg gcttagcttg
     7021 agcttaggac ccaaatatct tgccattttc tttctccaat tcttttaacg tcaattaaac
     7081 acgacgtttt ttcggtggac gacaaccgtt atgtggaatc ggagtcacat cagtaatatt
     7141 cgtgatacgg aaacctgctg catttaatgc acggattgtt gactcacgac ctggacccgg
     7201 tcctttaacc ataacttcca aattctttaa accaaactct ttaaccattt ctgcacaacg
     7261 ctctgcagca acttgagcag cgaatggagt cgatttacga gaaccacgga aacctgaacc
     7321 acctgcagtt gcccaagcta gagcattacc ttgacggtca gtaatagtaa cgattgtgtt
     7381 attgaaagat gcgtggatat gagctacgcc atctgcaatc tgttttttta cgcgcttacg
     7441 tgcgcgaact ggtgttttag ccattattta tctactccga ctattttttg atcggtttgc
     7501 gtggaccttt acgggtacgc gcattagtct tagtacgttg accacgtacc ggtaaactac
     7561 gacgatgacg taaaccacgg tagcaaccta agtctaaaag acgtttgatg cttaaagtta
     7621 cttcacgacg taaatcccct tcgacagtaa atttaccaac ttcttcacgc agtttttcaa
     7681 tctgctcttc agacaattct ctgatcttta catcttcagc aatacccgtt gcagcacaga
     7741 tggcttttgc acgagtttta ccgataccgt aaattgcagt taatgcgatt acagtgtgtt
     7801 tttgatcagg aatgttaatg cctgcaatac gggccactat gcactcctat tatttaagtt
     7861 tattgatata ctgatcttga aaagcccgtt tcaggatact caaacagtat atcaggacga
     7921 atgagctgag cagtataact gctcagcggg ttctttgcaa gaaatatgcg taaattaacc
     7981 ttgacgttgt ttgtgtttag gatcgctaca aattacacga accacacctt cacgtttgat
     8041 tactttacaa ttacggcaca ttctttttac tgaagcacga actttcattg cttatccttt
     8101 attaacggcc tattaattta gaccttttaa gttagctttc ttcaacacag aatcatattg
     8161 ttgagacatt aaatgactct gaacctgtgc gatgaaatcc ataataacaa ccactacaat
     8221 caataatgat gtaccaccta attggaatgg caccttccat aacgacgtaa tgatgtaagg
     8281 aaccaaacaa acaaaagcaa tatataacgc accaattaag gttaaacgtg tcattacttt
     8341 atcgatataa cgagatgttt gttcgcctgg tcggtaacct ggtacaaacg cacctgattt
     8401 cttaagatta tccgctgtat cacgaggatt atactgcatt cctgtataaa agaaagcaaa
     8461 gaaaatcact gccattgtga ataatacaac atacagtggt tgacctggct gtaatagttg
     8521 tgaaaggtta aataaccact caaatccttc gctttgacca aaccattgag taatgcttgc
     8581 cgggaataaa ataatacttg aagcaaaaat tgccggtatt acccctgcca tattcacttt
     8641 taatggtaag tgagaagttc ttgcaggcgc catcattcga ccttgttggc gacttgcata
     8701 gtttacaact attcttcttt gtccacgttc aacaaaaaca acaaaataag ttactgcaaa
     8761 tgcaattatt gcaactagta gtaagacgat aaatgataac tcgccttgac gggcttgttc
     8821 tattgtctgc cctatcgttg ctggaagatc tgcaacaata cctgtaaaaa taatcaatga
     8881 gataccgttt ccgataccac gctcagtgat ttgttcgcct agccacatta ggaacattgt
     8941 tcctgtcact aagcttacta cagaggttac atagaataat atacttggat taggaactaa
     9001 tccatgtacc atattcggta gggctagtga aataccaata gattgaataa atgctaataa
     9061 cagtgtgcca tagcgtgtat atttactgat tttccgacga cctgcttcac cttctttctt
     9121 taattcagct agaggtgggt gaatcgctgt caataattgg ataataattg acgctgaaat
     9181 ataaggcata atacctagtg caaatataga tgcacggctt aaagcaccac cagagaacat
     9241 attaaacata tcaatgatgg tgccttgctg ttgtcgaatt aattcggata atacagaagc
     9301 atcaatgcca ggaacaggta taaaagaacc gatacggaaa acgattaacg cacctaaaac
     9361 aaacaatagt cttgatttaa gctcgccagt ccctttttgt gtactacctt ggtaccctgg
     9421 ttgctttgcc atctttattc ctcgatagaa ccgccagcag cttcaatagc agctttagcg
     9481 cctttagtta cacgtaagcc tttaacaact actgctcttt caattttgcc tgctaaaatt
     9541 actttagcag ataaaatatc tttagtaatg atgtttgctg cttttaatgt ctctaaagtt
     9601 acttcgttgc catctacttt agctaagtcg tttaaacgaa tttcagccac atggaatgat
     9661 tttaatgaag taaaaccaaa ttttggcaaa cgacgatata aaggcatttg accaccctcg
     9721 aaaccacgac gaacaccgcc gcctgtacga gatttttgac ctttatgacc gcgcccacca
     9781 gttttaccta aaccagaacc aataccacga cctagacgtt ttgcactgtg cttagcacct
     9841 tcagctggag aaagagaatt taaacgcatt ctattactcc tctactttaa ccatataaga
     9901 cacttgattg atcataccac gcactgctgg tgtatcttca agttctacag tatgacgaat
     9961 atgacgaaga cctaagcctt ttaacgttgc tttatgtttc ggtaaacgag cgatagagct
    10021 acgagtttga gttactttaa tttttgccat atccaattac cccaaaattt cttcaactgt
    10081 tttgccacgt tttgcagcaa ccatttcagg tgatttcatg ttctcaagtg catcgattgt
    10141 tgcacgaaca acgttaattg ggttagttga accatacgct ttagaaagaa cgttacgaac
    10201 acccgcaact tctaatactg cacgcattgc accaccagcg atgatacctg taccttcact
    10261 tgctggttgc ataaatacgc gtgaacctgt atgtgaacct ttaactggat gttgtaatgt
    10321 accttcattt aaagctacat taatcatatt gcgacgagct ttttccatcg ctttttggat
    10381 tgctgctgga acttcacgtg ctttaccgtg accaaaacct acacgaccgt taccatcgcc
    10441 cactactgtt aaagcagtga aactcataat acgaccacct tttacggttt ttgaaacacg
    10501 gttaaccgcg attagctttt cctgcagttc accagcttgt ttttcgatgt ttgacatctc
    10561 aaattcctct attagaactg tagaccagct tcacgagcag catctgctaa tgattgcaca
    10621 cgaccgtggt atttaaaacc agaacggtca aaagcaaccg ctttaatacc tttggcaatt
    10681 gcacgctcag caacgatttt acccactact gctgcggctt ctttattgcc ggtatattta
    10741 acttgctctt taattacttt ttcaacagtt gaagctgctg ctagtacttc tgagccatta
    10801 ggtgcaatca cctgcgcata gatatggcga ggtgtgcgat gcacaactaa acgtgttgca
    10861 ccttgctctc tcattaaatg acgtgcacgg cttgcacgac ggatacgagc tactttctta
    10921 tccatagtgt taccttactt tactttttct tcgcttcttt tgtacgcact acttcatcag
    10981 agtaacgtac acctttacct ttataaggtt caggtttgcg atatgcacga atatctgctg
    11041 ccacttgacc aattaactgt ttgtcagcac ttttcagaat aatttctgtt tgtgatggac
    11101 attcaccagt tacgcctgct ggcaacgtgt gttctactgg gtgagagaaa cctaaactta
    11161 aagcaacagc attgcctttc atttgtgctc tataaccaac acccactaat tgcaatttct
    11221 tagtaaagcc ttcagtaacc ccgattacca tattatttac tagtgcacga gcagtacctg
    11281 cttgagcatc tgcattagcg ataccttcac gtggagcgaa agttaatgca tctgcttctt
    11341 gttttacttc aactgcattg tgaatttcac gagataactc gccgttttta cctttaactg
    11401 ttaatagctg accgttaagt tttacctcaa caccggcagg aatattaaca ggtgcttttg
    11461 caacacgaga catttttcct acctctctat tatgctacgt aacagataat ttcaccgccg
    11521 aggcccgctt gacgcgcagc acggtcggtc attacacctt tagatgtaga aacaactgcg
    11581 atacctaaac cacccattac ttttggtaat tcgtctttgc gtttataaat acgcagaccc
    11641 ggacggctca cacgttggat actttctaca accggtttgt tttggaaata ttttaaagta
    11701 atttccagtt caggtttaac accttcaaca actttaacgc tttcgatata accttcttca
    11761 gctaaaacat ttgcaatagc aacttttaac ttagatgaag gcatactgat tgcaactttg
    11821 ttcgcagctt gaccgttacg aatacgggtc agcatatctg cgattggatc ttgcatgctc
    11881 atgtatttac tcccatgatt ccaaattaaa agaggttatt accagcttgc cttcttaaga
    11941 cccggaattt caccgcgcat agcagcttca cgaaccttaa tacggcttaa accaaactta
    12001 cgaagtacgc catgtggacg accagtttgg cggcaacgat tacgctgacg gattgggcta
    12061 gaatcacgag gaagtgtttg taattttaac actgctgccc aacggtcttc atcagatgca
    12121 ttcacatcag agatgatttt ctttaattct tcacgttttg cgtagaattt atcagctaat
    12181 ttagcacgtt ttacatcgcg tgcgatcatt gattgttttg ccacgataac ctaccttatt
    12241 tacggaatgg gaaattgaaa gcagctaata aagcttgacc ttcttcatca gttttcgctg
    12301 aggtggtgat agtaatatct aaaccacgaa cacgatctac tttatcgtag tcgatttcag
    12361 ggaaaatgat ttgttcacga acacccatac tgtaattacc acgaccatcg aatgacttag
    12421 cgtttaaacc gcggaagtca cgaatacgtg gaacagcgat agtaatcaat ctttcaaaga
    12481 attcccacat acgttcacca cgtagggtta ctttgcaacc gattggatac ccttgacgga
    12541 ttttaaagcc tgcaacagat ttgcgagctt tagttactaa aggtttttga ccgctgattg
    12601 ctgctaaatc cgctactgcg ttatctaaca gttttttgtc ggtcaatgct tcacccacac
    12661 ccatgttaag ggtaatcttt tcgattcgtg ggacttgcat gacagatgag tagttgaatt
    12721 ttgcttttaa ttcattaact actgtatctc tgtagtaatc atgcagtttc gccatcacat
    12781 tactccagtt aattaaattg ttttctcgtt agatttgaag aaacgcactt ttttgccatc
    12841 ttcgaatcta aatcctacac ggtcagcttt gttggtttca gggttgaaga tcgcaacgtt
    12901 tgaaacatcg attgcagctt ctttcttcac taaaccacca gctttgccta atgcaggaac
    12961 tggtttttcg tgtttagtga tgatgttgat accctcaaca aaaactttac catttggtaa
    13021 cactttagtt accttaccac gtttgccctt atctttaccg gtaagaacaa ttacttcatc
    13081 gttttgacgg atttttgcag ccattacatt ctccttatag tacttctgga gctaaagaga
    13141 tgattttcat aaacttctca gaacgaagtt cacgagtcac cggtccaaaa atacgagtac
    13201 cgattggttg ctcagtgtta ttgtttaaaa ttacacaagc attgccatcg aaacgaataa
    13261 ctgcgccatc tgggcgacga acacccttct tggtgcgcac aacaactgct tttaacacat
    13321 cacctttttt cactttaccg cgtggaattg cttcttttac agtaacttta atgatatcgc
    13381 caatagcagc gtaacgacgg tgcgatccac ctagaacctt gatacacatt acgctacgag
    13441 cccctgagtt atcagcaaca tccagcatag tctgttcttg gatcatatta gtgctccgtt
    13501 aaaataaaaa aacacccttt cgggacgaac ctatttatac aa
//
LOCUS       DANLTI010000077        13402 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.077, whole genome shotgun sequence.
ACCESSION   DANLTI010000077 DANLTI010000000
VERSION     DANLTI010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13402
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.077"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1076)
                     /locus_tag="PXB09_001713"
     CDS             complement(<1..1076)
                     /locus_tag="PXB09_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HDL5233817.1"
                     /translation="MMSFLSEVFSSFKPTKTEVISSEPNENSGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDVNPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAKNSAFSEEWLRVQAKHFKDIGKPEGLFIDERVTNTAWSGRIRSTKMVIYRYVDKS
                     NDTNENLIVEQLNNACSRINGALTTAGLQLQRLDGEQFRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLP"
     gene            complement(1076..1474)
                     /locus_tag="PXB09_001714"
     CDS             complement(1076..1474)
                     /locus_tag="PXB09_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5233818.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            complement(1487..2059)
                     /locus_tag="PXB09_001715"
                     /pseudo
     CDS             complement(1487..2059)
                     /locus_tag="PXB09_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
     gene            complement(2037..2543)
                     /locus_tag="PXB09_001716"
     CDS             complement(2037..2543)
                     /locus_tag="PXB09_001716"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233819.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            2563..2712
                     /locus_tag="PXB09_001717"
                     /pseudo
     CDS             2563..2712
                     /locus_tag="PXB09_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            2713..3306
                     /locus_tag="PXB09_001718"
                     /pseudo
     CDS             2713..3306
                     /locus_tag="PXB09_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(3460..4275)
                     /locus_tag="PXB09_001719"
     CDS             complement(3460..4275)
                     /locus_tag="PXB09_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL5233820.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(4611..5447)
                     /locus_tag="PXB09_001720"
     CDS             complement(4611..5447)
                     /locus_tag="PXB09_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL5233821.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(5447..6250)
                     /locus_tag="PXB09_001721"
                     /note="aph(3'')-Ib"
     CDS             complement(5447..6250)
                     /locus_tag="PXB09_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL5233822.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(6419..7264)
                     /gene="sul2"
                     /locus_tag="PXB09_001722"
     CDS             complement(6419..7264)
                     /gene="sul2"
                     /locus_tag="PXB09_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL5233823.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            7427..8719
                     /locus_tag="PXB09_001723"
     CDS             7427..8719
                     /locus_tag="PXB09_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5233824.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFYK
                     GKTETFKGFEFVDQLVAHLPPRRVQLLRRYGVYAGKVRKQWQERPNIYSLAPESWQKG
                     HPRESKIVPAIPQEKPETVQVSDAWSKLRKQSWARLLQKVYEVDPFVCPKCQGTMSVV
                     AIIEDPKELAKIINWAKQQEREQPVAVCARSPPELALV"
     gene            9059..9316
                     /locus_tag="PXB09_001724"
                     /pseudo
     CDS             9059..9316
                     /locus_tag="PXB09_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            9785..10231
                     /locus_tag="PXB09_001725"
                     /pseudo
     CDS             9785..10231
                     /locus_tag="PXB09_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            10508..11722
                     /gene="floR"
                     /locus_tag="PXB09_001726"
     CDS             10508..11722
                     /gene="floR"
                     /locus_tag="PXB09_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL5233825.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            11750..12055
                     /locus_tag="PXB09_001727"
     CDS             11750..12055
                     /locus_tag="PXB09_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233826.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            12167..>13402
                     /locus_tag="PXB09_001728"
     CDS             12167..>13402
                     /locus_tag="PXB09_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL5233827.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRV"
BASE COUNT         3119 a         3530 c         3524 g         3229 t
ORIGIN      
        1 ggcaacaagt caaataatgc attgatatta cgcccacgag taatctcgcc agtcatcaac
       61 cccacttccg gttgtttcct caaattattg actacaacaa cttcgtgcgg ttggtcatca
      121 aaataccaat agttgccttc atttttcggt tgagaataaa ataaatcttc actgaaatcg
      181 ttaaacgcta attctggaag cccgtcattt gaggtttgtt taccaaaaag atggtagcaa
      241 tcattgttgc ttaacccctc aaaattaata gaaggattgg gattaaacca acgtaacagc
      301 cattgacgaa attgttcgcc atccagtcgc tgcaattgta atccagcagt tgttagagct
      361 ccatttatgc gagaacaagc attgttcagc tgctcgacaa tcagattttc attagtgtca
      421 ttggatttat caacataccg atagatcacc attttggtac tacgtatacg accagaccaa
      481 gctgtatttg tcactcgctc atcaataaaa agcccctctg gtttaccgat atccttgaaa
      541 tgcttggctt gtacccgtaa ccattcttcg ctaaatgcac tatttttagc gataggcgag
      601 atataatttc gtagctgttc aatataaggc tgtaaatcat cgctgtcttg gcaataaaat
      661 tgaacaacgt acggatttac atccaattca tcaaagctgt cttgcaaggc atctttgaca
      721 agattacgta tccgacttaa aaattcaata ctacggccag cagtaccaat cggcttaata
      781 tcaaatactg ccccaacact acgggcatca tcaaggagta tcacaccgtg ctcattcaaa
      841 tattctcccc aaggtagatg atcgataaag gagggctctt gtgagtataa ccgacggtga
      901 tgctgtgact gggtgagttt tccactgcgt tttaattgtt gaacctcgtt atttacctca
      961 ctcattttat tttgaatgat gtcagactca cctgaatttt catttggttc acttgatata
     1021 acctctgtct tagtcggttt gaaagaggaa aatacctcac ttaaaaaaga catcatcaaa
     1081 gccctcttgt tcgatcaccc ggttgagcat attggactcg cccgtagaaa ggtaataccg
     1141 tagaatatcc tggaatacta agaggctctc cggaacgagt ttggtgtgga tacacataca
     1201 taatcagatc cggattaggt aaacgaggga acaagttatt aatttcattt tctgccgtac
     1261 gggtataggc tcgttgctca gtgttaggaa tataatcgac aggatcgagt gttcgtcctt
     1321 gttgtgaacg gtataagtgt agatcgttat tacctgctcc tttatcccaa atatctcgca
     1381 tcgtactgcc gttagcgggt aataattctt cagttgaagt tgtgcaacct gttatcaata
     1441 aggcactcat cattatgcaa tataaagctt tcattgtttg ttccttttaa tcaagttgtg
     1501 tattagttga tgtgtttccg tatttcactt tacgtccttt ggagttgtaa tcgatctcaa
     1561 tctctttctc gatatgaata gcgacacgat gtccaggtgg tacatagaca gcatcaaagt
     1621 tttcagcaaa acgctttcta aaccagtcgg cggattcttt taaaccaccg ccgatggctt
     1681 gccctaagat gaacttacct tgatcaccgg taacagctcc aacaacacta ttgccatcaa
     1741 ctactgtcgt tgtttgtgat tgtgaaaacc cttgggctgc ggcactggca gccgctaaga
     1801 agaaatttgt gcctaaatat tctggtgcat ttgtttttct ctccccggga acacaaggaa
     1861 tgcctgaact atcagataac caaccgatat tctcactatt ccctttgtta gtcgtgctga
     1921 caatacgccc atcattgaac acaaaggtca tactttttac atcgcctcgt acacaagata
     1981 gagtccagtc gccagtagct gtacccgaaa caatcgcacc ttctacatca agtaattcaa
     2041 taccattggc aatgagatgg tttagcctta gttctcaatg cttttagctg attttctagg
     2101 atattttggg cgatttgctc caatcggtcg ttaaattctc gcaaaaactc catagtctgc
     2161 cgatactgtt ctgatgacaa tagattagaa tttgcgttat tttgcgtttt aggcgtgttt
     2221 gttggtgtgg gtgctacctt actaccattt ttatttttga taggtcttgt aggctctatg
     2281 agagcgtttt cagacgtttt attagttaat ctttcgcctg attttgatat ttggcgatat
     2341 tcttggctag aattgcctga atatcctgtc cgctgttcgt tgctcgtttg gcgacttcct
     2401 gacgaaattt ctcgtccgtt gccattctct cgctcgcttt cgctgacttg ttcaaccact
     2461 cttgaaccca agagttgttt tgctcgttca tctgattttt cctgtgtctg tgattgtgtg
     2521 gattttaagg tttggtaagc caaaacttgc tcgttatacg ccaaggagga cacccggcgc
     2581 aaggtgctgg taggcgcgtg gatactcggc aaggttgaaa gcggcgagtg gccagaacag
     2641 cgcctgctcg atgggttgga tagctaccta gagcgcgacc atgatcgggc gctgttcgga
     2701 ctgccaccca aggggtcgat ttgcggccac acctttgcgg taaatgaaaa aggtatcgtt
     2761 aacacggtga ataacatccg tgcagtgtat cgtccgcagg gattaccgcg tcagatcctg
     2821 gctcgcgcct cgctgaatgc gaacaccctc gacgaggcca tcactatact taccggccag
     2881 ccgcgatccg gggcgtttca ccatacgctc gggcagctgg gcgatgcgcg gctgttcagc
     2941 gttgaggcca ccggtcaagg ctgttccgtt ctacccctga cgacggtaac cgggcatgcc
     3001 aaccatctgg tgcatgcggc actggctggc gttgagcaga tcgttaccga cagttcagcg
     3061 tcgcggcagt tacgcctcgt gcagtggcgg gaaacgcaac ctccgtttga cgccgcggcg
     3121 gcaaaaacca ttctctcaga tacccatgac gcagaactgc caatttaccg gctggctgcc
     3181 gacgatccgg atgaggagaa caccctcgcc acggcagttt tcaccctcga tgccaaccac
     3241 gtcaggtggc aaattttcga cattaaccgc gacgatgcta aatttcatgg agaagtgcgt
     3301 gggtgaaata gccggtcgtc agtcataaag ggcaggggag taccgttggc ccggcgttcg
     3361 atagtaccgt ccggatactg ccagatatcg gcgtccaggg agatgtcctg aagcgcggtg
     3421 tccggaattt caggtttgtg tctctacaaa gactaactat cagaaaaact catcgagcat
     3481 caaatgaaac tgcaatttat tcatatcagg attatcaata ccatattttt gaaaaagccg
     3541 tttctgtaat gaaggagaaa attcaccgag gcagttccat aggatggcaa gatcctggta
     3601 tcggtctgcg attccgactc gtccaacatc aatacaacct attaatttcc cctcgtcaaa
     3661 aataaggtta tcaagtgaga aatcaccatg agtgacgact gaatccggtg agaatggcaa
     3721 aagcttatgc atttctttcc agacttgttc aacaggccag ccattacgct cgtcatcaaa
     3781 atcactcgca tcaaccaaac cgttattcat tcgtgattgc gcctgagcga gacgaaatac
     3841 gcgatcgctg ttaaaaggac aattactaac aggaatcgaa tgcaaccggc gcaggaacgc
     3901 tgccagcgca tcaacaatat tttcacctga atcaggatat tcttctaata cctggaatgc
     3961 tgttttcccg gggagcgcag tggtgagtaa ccatgcatca tcaggagtac ggataaaatg
     4021 cttgatggtc ggaagaggca taaatgccgt cagccagttt agtctgacca tctcatctgt
     4081 aacatcattg gcaacgctac ctttgccatg tttcagaaac aactctggcg catcgggctt
     4141 cccatacaat cgatagattg tcgcacctga ttgcccgaca ttatcgcgag cccatttata
     4201 cccatataaa tcagcatcca ggttggaatt taatcgcggc ctcgagcaag acgtttcccg
     4261 ttgaatatgg ctcataacac cccttgtatt actgtttatg taagcagaca gttttattgt
     4321 tcatgatgat atatttttat cttgtgcaat ataacataag agattttgag acacaacgtg
     4381 gatttgttga ataaatcgaa cttttgctga gttgaaggat cagatcacgc atcttcccga
     4441 caacgcagac cgttccgtgg caaagcaaaa gttcaaaatc accaactggc ccacctacaa
     4501 taaaggggtc gtttgcggga gagggcgaaa tcctacgcta aggctttggc caacgatatt
     4561 ctccggtaag attgatgtgt tcccagggga taggataagt cgcttgatat ctagtatgac
     4621 gtctgtcgca cctgcttgat cgcggccgcg atagctagat cgcgttgctc ctcttctcca
     4681 tccgcgttcc aagctgcgga aaggcaccca taagcgtacg cctggtcgag caggcgacgc
     4741 ggatcgacgt ccagcgcacg agagaatgcg tccgccatct gtgcaatgcg tctaggatcg
     4801 agacaaaggt cgtctctgtc agccggatcg tagaacatat tggcggcgcc aaagcccact
     4861 tcaccgacca gaccgacggg atctatcacc agccagccgc gactggagaa catgatgttt
     4921 tcatgatgca gatcgccatg tagcccacgc agttccgagg cattgctcat catttgatcg
     4981 gctataatcg ccgcgtggac gtagtcagtt tgacaacctg cgttttgatc atcgcgcgcc
     5041 cgctgaaaca aagctgcaaa gcgatcccgg atcgggagaa gggcagaagg caggggttcc
     5101 tcagatgcgg catacagctt cgccatcagt tccgctgcaa tttcggtcgc ctggtagtcg
     5161 ccgtgctcgg caacgatgtg agagagcatt cgctccccgg catattcgag caacatcaga
     5221 ttgttctcac gaccgagcaa ccggactgct cccctcccat tgcgccatac cagatagtcg
     5281 gccccgcgca gttcatcagc aatgtcttct ataggtttca atcccttgac gattgcagga
     5341 gtcccgtctg gcaatgaaac tttccaaacg aggctggaaa aggtgtccgc aatgagaaca
     5401 ggttgcgaaa cgtgccaatg agcaggaaaa acaggcggca tgaacatcaa ccccaagtca
     5461 gagggtccaa tcgcagatag aaggcaaggc gttcgcggtc gggggcttcg atccccaata
     5521 cattgaatag gacagcgaag gcgcgctctg cttcatctgg cgctgcccag ttctcttcgg
     5581 cgttagcaat catgagtgcc aaatcggcat agcgatctgc tgttccgagc cgcccaaggt
     5641 cgatcagacc cgtgcattga agagttttag ggtccaccat gaagttcggc atgcagggat
     5701 caccatggca aacaaccata tcggtgcgct cttggtcgag ccgcaccggt agctctcgtt
     5761 cgacacgagc caaaagatcg agctgcggcg tactcttgtc ctcgtccggt aagaagtcgg
     5821 gattgacggc attgcgggac accacatcaa cggcgcgtcc gaacattcgc gacagcctgc
     5881 gctcaaacgg acattgatca accgataggc tgtgaacagc gccaagttgc tgccccattg
     5941 acggccacgc tttgagcaaa tccgctccag acagatcagc cgccggtact cccggaattg
     6001 ccgttatcac caagcatgca ccctcctgtt cctcctgcca gttgatcacc tcggggcaag
     6061 ccacacctcg acctttgagc caaatgaggc ggtcacgctc tccagcgagc tcaccgcggc
     6121 gggaagcagg tgcgattttc gcgaaggcat gcccgtcacc acgtcgaaaa acaaaatcac
     6181 cggattctcc gcctctgaca ggcaaccagt cagaatgcga ttcaccaaaa aaaatattag
     6241 ttcgattcaa tggaggttcc ttcagttttc tgatgaagcg cggaggtggc tttgccacga
     6301 ataccatctg tgccgaaata tttgcgcacc ataaggtcga ttatcctgtc gtcgggtcgc
     6361 cctcaaaggg gacatgcctg ctgaaccgcg aatatagaga aatatcccga atgtgcagtt
     6421 aacgaattct tgcggtttct ttcagcgccg ccaataccgc cagcccgtcg cgcaaggggc
     6481 gcggctcgtg tgtgcggatg aagtcagctc cacctgcggc ggcggcaagc tctgcagcga
     6541 gtgtcgcggc cccgacatcc cccggaccac ggcctgtgag cgcgcgcaga aaggatttgc
     6601 gcgaaacaga cagaagcacc ggcaaatcga agcgcagccg caattcatcg aaccgcgcca
     6661 gcaccgagag cgaggtttcg ggagcagccc ccagaaaaaa ccccatgccg ggatcaagga
     6721 caaggcggtt gcgtttgata ccggcacccg tcagcgccgc gatgcgcgcg tcaaagaacg
     6781 ccgcaatgtg atccatgatg tcgccagcgg gtgcctcgcg ccgatctgcc tgcccgtctt
     6841 gcaccgaatg cataacgacg agtttggcag atgatttcgc caattgcgga tagaacgcag
     6901 cgtctggaaa accgcggata tcattgagat aggccacacc acgcgacaag gcataggctt
     6961 gcgtcgcggg ttgataactg tcgagcgaga cgggaatgcc atctgccttg agcgcgtcca
     7021 gcaccggcgc gatacgcgcg atttctgtgt cggacgaaac aggcgcggcg tcgggattgc
     7081 tggatgccgg accgaggtcg atcacatctg ccccctcggc catcagctta cgcgcctgcg
     7141 caatggctgc gtctggcgcc agataccggc ctccatcgga gaaactgtcc gaggttatgt
     7201 tgacgatgcc gaaaatgatg agcgatttat ttcgagctat ttgtgattta cttgtatatt
     7261 ccattttcct ccgcgccgaa ggcgtcaacc taactttcgg ttgagctgcg aacgggcttg
     7321 tcccgtgagt ccgctcgaac cggttgttag gtggcgccag tccacatttt ccattatttt
     7381 cttcgcaatt gcaagcaaat gatcgttttc ctgcgtatgt ataggtatgg gaacttacat
     7441 tccccatcgg gaagggataa tccagaccat agtccgcaat tctctaaccc agtaccaagc
     7501 ctacgcaagt ccatcgcaaa ctatccttga ccgccttgag cattttgctg aatgtgccga
     7561 ttggaccaag ggtgttgttc gaatacgttg ccatgattgt ggacattcgt acttcaggcc
     7621 attttcgtgc aaggttttcc acctttgccc atcctgtgac caaaaacgga ccttactcta
     7681 tgctgaatac ctggccgagg atttgctcct tgatctaccg catcggcaat ttgtttttac
     7741 gattcccaag attctcagac catactttaa atcggataag cgactgtttg gcgaggtgtc
     7801 caggctggta ttctccttgc tttctgattt tttctccctg gcagccggtc aagaactact
     7861 atgtgcctgt gttgtcagct atcagtcgtt tggtgaattc gctcgattcc acccgcactg
     7921 gcatgttctg gttctggaag gtgggttcac caagtacgac cgctttgtat atttaccaat
     7981 tggagccgac gaagggatgc tcaaggtctg gcaagcagcg attatggctt tgtttctgcg
     8041 aaaggaacta atagatcaag cccgagtgaa catgctcaga gactggaagc attccggctt
     8101 tagcatcgag agcgaaacca gactattcaa caaggccgat cgagaagccc tcggccagta
     8161 tgtcgttcgc ggcgctacct gtgcagaaaa aattcagtat gatccagctt ccgacacgat
     8221 aatctggaca gctagcccaa agggattcta caaaggaaaa acagagacct tcaaaggctt
     8281 tgaattcgtc gaccagcttg tggcccattt accaccaagg cgggttcaat tgcttcgtcg
     8341 ctatggcgta tatgcgggca aagtccgcaa gcagtggcaa gagcgcccca atatttatag
     8401 cctggcccca gaaagttggc aaaaaggtca tccacgcgaa tccaaaattg ttccagccat
     8461 acctcaggag aaaccggaaa ctgtccaagt ttccgatgcc tggtccaagt tgcgcaaaca
     8521 aagttgggca cggttgttac agaaagtcta tgaagttgac ccgtttgttt gcccaaaatg
     8581 ccagggaaca atgtcggttg tggcgataat cgaggatccc aaggagcttg ccaagattat
     8641 taactgggca aagcagcagg aacgggagca gccagtggcc gtctgtgctc gttcacctcc
     8701 tgagcttgct ttggtgtagg tataataccc aaaaacgaag tttatgcgga acaggataac
     8761 acctcgaaat cggagtttat atggcttcgt gggggagtta tgtgtttgag ctttgtcgca
     8821 ttaacgcgaa tcaggggttg acggcagaaa tagactggaa ttacacttct tggagtcggc
     8881 gttgccggaa aattctgatt ggattagttg ttcggggtgc gaaaacagtc gtagttcggg
     8941 gaaaaaaccg aattttgacc cgaaaccgca aaaaacccga aatgacagtt cctataattt
     9001 atttatttgg gggcgtgcac ctgtagcctt agcgacttta aatgacagtt cctataattc
     9061 tgatgaaccg gcaacaccag cacaacggcg agcgtcgatg acatgggcgc aacggctcaa
     9121 gcgtgttttc aatatcgaca tcgagacctg cagcggctgc ggcggcgcca tgaaagtcat
     9181 cgcctgcatt gaagacccta tagtgatcaa gcagatcctt gatcacctga agcacaaagc
     9241 cgaaaccagc gggaccaggg cgttacccga aagccgggcg ccaccggctg agctgctcct
     9301 gggtctgttt gactgacgag cctgaaggcc aacgatacca atcaaaatgc tgcgttcaca
     9361 gcgccgcggc agggatccgc cgtgctggtt gtcggaaaag gagccgctag tgggaaagag
     9421 gagggtaaat tttcagcgtt gctggctccc cgtcagccgg attgggttgc atcgcagggg
     9481 tgtcgaaaga gtcaactgcg gtccaaagct gttggacttg ggtgaaaagg gcgtttattc
     9541 ttcctatacg tgccgcgttc caggcggcga ctatgagggc tatgtcgatg cccatgtgcg
     9601 ccggctggag gcgctacgcc gggccggtat cgtcgagcgg atcgacgccg accaatggcg
     9661 catccccgat gatctggtca gccgtgccgc cgcccatgac gccggccgag acagtcaggc
     9721 cagcgttcgc gtcctttccc cggtcgatct gaacaaacag atcggatcgg acggcgcgac
     9781 ctggctggac cggcggctga tccacggcga gacggccgac cttgcgccaa ccggcttcgg
     9841 gcaacaagtc cgcgaagcca tggaccagcg ccgcgagcac catatcgaac agggcgacgc
     9901 cacccgcagc cgggacagcc gcgtcttcta ccggcgcaac cttctcgcca tcctgcggga
     9961 gcgcgaggta gccggcgtcg gatcggatat ggctttgagt aagggcctgc cgttccgcgc
    10021 cgccacggac ggcgagagcg tcagcggcaa gtttaccgga accgtgcatc tatcgagcgg
    10081 caagttcgcc gtggtcgaga aatcccatga gttcaccctt gtcccgtggc ggccgatcat
    10141 cgaccgccaa ctcggccgcg aggttatggg catcgtgcag ggcgggtcgg tgtcgtggca
    10201 gttagggcgg cagagggggc tggaacgctg agtgcgccca tgccgcattg cgaagcaaaa
    10261 gataatcgga taaaatgtag caattcatat tcgtaagcgt ggagtaatca gatgggaaat
    10321 tccaagtcag cagacaagta agccgcaaca accagtattg ttgttgcggc gctctgtaag
    10381 gctagtctca tctgattgct gacgagcaga cgtcgcccgg tattccttaa tcgagggttg
    10441 attcgtcatg accaccacac gccccgcgtg ggcctaaaca aatatcaatc gcaaggagat
    10501 catattcatg accaccacac gccccgcgtg ggcctatacg ctgccggcag cactgctgct
    10561 gatggctcct ttcgacatcc tcgcttcact ggcgatggat atttatctcc ctgtcgttcc
    10621 agcgatgccc ggcatcctga acacgacgcc cgctatgatc caactcacgt tgagcctcta
    10681 tatggtgatg ctcggcgtgg gccaggtgat ttttggtccg ctctcagaca gaatcgggcg
    10741 acggccaatt ctacttgcgg gcgcaacggc tttcgtcatt gcgtctctgg gagcagcttg
    10801 gtcttcaact gcaccggcct ttgtcgcttt ccgtctactt caagcagtgg gcgcgtcggc
    10861 catgctggtg gcgacgttcg cgacggttcg cgacgtttat gccaaccgtc ctgagggtgt
    10921 cgtcatctac ggccttttca gttcggtgct ggcgttcgtg cctgcgctcg gccctatcgc
    10981 cggagcattg atcggcgagt tcttgggatg gcaggcgata ttcattactt tggctatact
    11041 ggcgatgctc gcactcctaa atgcgggttt caggtggcac gaaacccgcc ctctggatca
    11101 agtcaagacg cgccgatctg tcttgccgat cttcgcgagt ccggcttttt gggtttacac
    11161 tgtcggcttt agcgccggta tgggcacctt cttcgtcttc ttctcgacgg ctccccgtgt
    11221 gctcataggc caagcggaat attccgagat cggattcagc tttgccttcg ccactgtcgc
    11281 gcttgtaatg atcgtgacaa cccgtttcgc gaagtccttt gtcgccagat ggggcatcgc
    11341 aggatgcgtg gcgcgtggga tggcgttgct tgtttgcgga gcggtcctgt tggggatcgg
    11401 cgaactttac ggctcgccgt cattcctcac cttcatccta ccgatgtggg ttgtcgcggt
    11461 cggtattgtc ttcacggtgt ccgttaccgc gaacggcgct ttggcagagt tcgacgacat
    11521 cgcgggatca gcggtcgcgt tctacttctg cgttcaaagc ctgatagtca gcattgtcgg
    11581 gacattggcg gtggcacttt taaacagtga cacagcgtgg cccgtgatct gttacgccac
    11641 ggcgatggcg gtactggttt cgttggggct ggtgctcctt cggctccgtg gggctgccac
    11701 cgagaagtcg ccagtcgtct aaccgacgac tggtagcagg cccgctccga tgcggcgcac
    11761 taaccatcga aacctcgtga atgtcggtat cctgtctggc aggataccgc tcatttccct
    11821 tgttcagttc atcgccgtcg ccgagcatct gaattttcgg catgcggcca aggcacttgg
    11881 tatcagccag tcgagcgtca gcgcgcgtgt gaaagcgctg gaggataacc ttggtgtcct
    11941 gctatttgag cgccatgcgc ggggcgttcg gctaacagac gcaggcaggc acttcatgga
    12001 gcgtgtcacg gcgggtgtcg atcaactcga tcacgcagtg aagaccgcgg agtgacgggc
    12061 actggctggc aatgtctagc aacggcaggc atttcggctg agggtaaaag aactttccgc
    12121 taagcgatag actgtatgta aacacagtat tgcaaggacg cggaacatgc ctcatgtggc
    12181 ggccaggacg gccagccggg atcgggatac tggtcgttac cagagccacc gacccgagca
    12241 aacccttctc tatcagatcg ttgacgagta ttacccggca ttcgctgcgc ttatggcaga
    12301 gcagggaaag gaattgccgg gctatgtgca acgggaattt gaagaatttc tccaatgcgg
    12361 gcggctggag catggctttc tacgggttcg ctgcgagtct tgccacgccg agcacctggt
    12421 cgctttcagc tgtaagcgtc gcggtttctg cccgagctgt ggggcgcggc ggatggccga
    12481 aagtgccgcc ttgctggttg atgaagtact gcctgaacaa cccatgcgtc agtgggtgtt
    12541 gagcttcccg tttcagctgc gtttcctgtt tgccagccgg cccgagatca tggggtgggt
    12601 gctgggcatc gtttaccgcg tcattgccac gcacctggtc aagaaagcgg gccataccca
    12661 ccaagtggcc aagacgggcg cggtcaccct gatccagcgt tttggatcgg cgctcaatct
    12721 gaatgttcac ttccacatgc tgtttctcga cggtgtgtat gtcgagcaat cccacggctc
    12781 agcgcgtttc cgctgggtca aggcgccgac cagcccagag ctcacccagc tgacgcacac
    12841 catcgcccac cgggtgggtc gctatctgga acggcaaggc ctgctggaac gggatgtcga
    12901 aaacagctat ctggcctcgg atgcggtgga tgacgacccg atgacacccc tgctggggca
    12961 ctcgatcact taccgtatcg ctgtcggttc acaggcgggg cgaaaggtgt tcactttgca
    13021 aactctgccg accagtggtg atccgttcgg tgacgggatt ggcaaggtag ccgggtccag
    13081 cctgcacgcc ggcgtggcgg ccagggccga tgaacgcaag aagctcgaac ggctgtgccg
    13141 gtacatcagc cgcccggcgg tatccgagaa gcggctgtcg ttaacacgag gcggcaacgt
    13201 gcgctaccag ctcaagacgc cgtaccggga cggcaccacg cacgtcattt tcgaaccatt
    13261 ggatttcatt gcaaggctgg ccgccctggt accgaagccc agagtcaacc taacccgctt
    13321 ccacggggtg ttcgcaccca acagtcggca ccgggcgttg gtcacgccgg caaaacgggg
    13381 caggggcaac aaggtcaggg tg
//
LOCUS       DANLTI010000078        13383 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.078, whole genome shotgun sequence.
ACCESSION   DANLTI010000078 DANLTI010000000
VERSION     DANLTI010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13383
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.078"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            381..1025
                     /gene="rppH"
                     /locus_tag="PXB09_001729"
     CDS             381..1025
                     /gene="rppH"
                     /locus_tag="PXB09_001729"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDL5233828.1"
                     /translation="MIDFDGYRPNVGIVICNKHGQVLWAKRFGQNSWQFPQGGINEGE
                     NIEAAMYRELYEEVGLSKKDVRLLWASKYWLKYKLPKRLVRNEGSGPVCIGQKQRWFL
                     LQLIGDESLINLKTTKNPEFDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFAQVLQNNI
                     QKATDDKTGEKPRIERGETSPHTYKKTSQDSAKAYKREARKPYRPWHQHNQKGK"
     gene            1027..1815
                     /locus_tag="PXB09_001730"
     CDS             1027..1815
                     /locus_tag="PXB09_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5233829.1"
                     /translation="MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPP
                     EYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRL
                     DPQLMSRIFAVMVLYLAGKMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGA
                     FIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPAL
                     FGITATSFFTSKMGASAANALPVPMLKKAFAVLLVCIAINMFLK"
     gene            1823..2620
                     /gene="lgt"
                     /locus_tag="PXB09_001731"
     CDS             1823..2620
                     /gene="lgt"
                     /locus_tag="PXB09_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDL5233830.1"
                     /translation="MNEQFIQFPQISPIVFEIGPIALRWYGLMYLAGFAFAYWLGMRR
                     AKNSNGVWTTEQVDSLVYTCFWGVVLGGRIGDVFFYSFDRFLQDPLYLFRIWEGGMSF
                     HGGLIGVIVAMIWVSYRQKRNFWQTADFIAPLVPFGLGMGRIGNFINDELWGRVTDVP
                     WAVLFPSGGYLPRHPSQLYEAFLEGVVLLFILNWFIQKPRPAGAVSGLFLIGYGTFRF
                     IVEYFREIDHNVNTTADLITRGQLLSLPMIIGGILIMAWAYKVNKVK"
     gene            2707..3375
                     /locus_tag="PXB09_001732"
     CDS             2707..3375
                     /locus_tag="PXB09_001732"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDL5233831.1"
                     /translation="MSKKYKVIGFDLDGTLINTLPDLTLVANSMFLEAGLPTVTQEKV
                     LTWIGKGADIFFQNAVAHTGRIFQADELVKMRVSFDKYYATYVCEESTLFPNVKETLE
                     ILKANDYPLVVITNKPTKLVEPVLSAFGIYHLFDETLGGQSLPKIKPHPDPMFFICEK
                     FGITPSELLFVGDSENDVIAAKAAGCDVVGLTYGYNYNVPIEQSNPTFVTSEFKDVLK
                     IVGL"
     gene            3445..3705
                     /locus_tag="PXB09_001733"
     CDS             3445..3705
                     /locus_tag="PXB09_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5233832.1"
                     /translation="MPTIALRQVGGSVAMVIPPAFLEALKLSVGSKVDLSLNDNQLVI
                     NPARPKVKYSLEELLRQSDFEAARNEESQSWLSEPAIGKEIL"
     gene            3702..4034
                     /locus_tag="PXB09_001734"
     CDS             3702..4034
                     /locus_tag="PXB09_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDL5233833.1"
                     /translation="MKRGDIYWLDLDPTLGHEQSGFRPVVIVSATAFNLASKLPVVVP
                     ITNGGAFAERLGFAVSLKDAGLKTTGIIRCDQPRTVDIAQRHGKFIEALPESLLDEIM
                     ARVSVIFE"
     gene            4161..5192
                     /gene="trpS"
                     /locus_tag="PXB09_001735"
     CDS             4161..5192
                     /gene="trpS"
                     /locus_tag="PXB09_001735"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDL5233834.1"
                     /translation="MSKPIVFSGVQPSGELTIGNYLGALRNWVKMQDDYDCVYCIVDQ
                     HAITVRQDPESLRKSTLDVLALYLACGIDPNKSTIFIQSHVPEHAQLAWVLNCYTYFG
                     EMGRMTQFKDKSARYEENVNVGLFTYPVLMAADILLYQANQVPVGDDQKQHLEITRDI
                     ANRFNALYGKKDSEGNLIEPVFAVPEVFIAKSGARVMSLLEPTKKMSKSDDNRNNVIG
                     LLEDPKAVAKKIKRAMTDGDEPPVVRYDVQNKAGVSNLLDILSAITGKTIAELETEFE
                     GKMYGHLKTEVADKVSELLTNLQERYHHYRQDEALLEKIYREGAEKARAQAKATLDKV
                     YELVGFVRY"
     gene            complement(5256..6011)
                     /locus_tag="PXB09_001736"
     CDS             complement(5256..6011)
                     /locus_tag="PXB09_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDL5233835.1"
                     /translation="MKFIKKLSYSVFLATVITACATTESINQEAAQSYAQVKTQARQQ
                     NAIDNSSATAKRIHTVFHKMKPYAERANQTGVPFHWEITVLKSDELNAWAMPGGKMAF
                     YTGLVERLNLSNDEIAVVMGHEMAHALKEHGKSDRTVSAITSIVGAIADVAVTASTGV
                     STEGLLSTGVDLIATKPFSRSQETEADEVGLILMAESGYNPSAAPNVWVKMSKANGDS
                     GLSIFSTHPSNADRQENLARLVPEAMKIYNARK"
     gene            complement(6067..6594)
                     /gene="ppa"
                     /locus_tag="PXB09_001737"
     CDS             complement(6067..6594)
                     /gene="ppa"
                     /locus_tag="PXB09_001737"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDL5233836.1"
                     /translation="MGLELVPAGKELPDDIYVVIEIPANSDPIKYEVDKETGALFVDR
                     FMATAMFYPANYGYVNNTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGG
                     DAKVVAVPHTKLSKEYDHIKDVGDLPALLKAQIQHFFESYKALEAGKWVKVEGWGDVN
                     EARQEILESFERAKK"
     gene            6811..6886
                     /locus_tag="PXB09_001738"
     tRNA            6811..6886
                     /locus_tag="PXB09_001738"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6844..6846,aa:Lys,seq:ttt)
     gene            6909..6984
                     /locus_tag="PXB09_001739"
     tRNA            6909..6984
                     /locus_tag="PXB09_001739"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6942..6944,aa:Lys,seq:ttt)
     gene            7006..7081
                     /locus_tag="PXB09_001740"
     tRNA            7006..7081
                     /locus_tag="PXB09_001740"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7039..7041,aa:Lys,seq:ttt)
     gene            7174..8208
                     /gene="mltG"
                     /locus_tag="PXB09_001741"
     CDS             7174..8208
                     /gene="mltG"
                     /locus_tag="PXB09_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDL5233837.1"
                     /translation="MLKKILIALGLAGVIACGGLFYGYQKLTSLAEHPITVQPNQLFV
                     LEKGVSSQKLAALLEEQGIVTHDDADLIPYLMRLYPELSKFKAGAYSLAGLTTVKDLL
                     AHLSSGKEVQLNVQFIEGKTFKIWREQLAKADYLQHTLQGKSEKEIADLLGIPHEKIE
                     GWIAPDTYNYTPNSTDLALLKRAYQKQKTALEQAWKNRAENLPLATPYEMLILASIVE
                     KETGIATERPQVASVFINRLRNNMRLQTDPTVIYGMGDRYNGNIRRKDLEEATPYNTY
                     QIDGLPPTPIAMPSEASIKAVANPDNTPYLYFVADGTGGHKFSKTLNEHNKAVAEWIQ
                     IERKRKNEQK"
     gene            8219..8839
                     /locus_tag="PXB09_001742"
     CDS             8219..8839
                     /locus_tag="PXB09_001742"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDL5233838.1"
                     /translation="MRGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGT
                     PLAEKLRHLIKHETEEAINDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSS
                     QAYQGGGRKLDRHLLETLKESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQS
                     LDFFYRTRERYLELTQHNDKAVIINAEQPIEQVTADIQQVIRNWLK"
     gene            8839..9816
                     /locus_tag="PXB09_001743"
     CDS             8839..9816
                     /locus_tag="PXB09_001743"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDL5233839.1"
                     /translation="MYPWLESTYQQLTDSFLQGRGHHALLFKTDVGLGTDTLIYKVAE
                     WLLCSQKLRHQPCLECKSCLLMQSNNHPDFHILEPIEDKDIGIDQVRELIYKLQNFAQ
                     QGGNTVVYIRGVDRLTEASSNALLKTLEEPRENVYFLLEAPLQATVLATIQSRSQTWV
                     LYAPQASEVMAWLQTQFPAISTDDLEIALRLCHSRPLICKNFIENDRLQQRKTFLQTF
                     WRFYKSHDVFLLFQAFAQEKELILQQLEWLESFFSDALKAKMAISHGWLNPDLQNGIL
                     PFSQQLTTHGLLKGHQILQQTQRDLTEINAVNPELMLLDCLTKLVLVFE"
     gene            9947..10189
                     /locus_tag="PXB09_001744"
     CDS             9947..10189
                     /locus_tag="PXB09_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5233840.1"
                     /translation="MARTTSVTLGEPLNDFVNEMVASGRYGSTSEVVRTALRMLEEKE
                     QYLAQLRQAIDDGDASGYATETIDEMMLRVKAELNV"
     gene            10182..10466
                     /locus_tag="PXB09_001745"
     CDS             10182..10466
                     /locus_tag="PXB09_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5233841.1"
                     /translation="MYKLSAQALRDQEKLFRYSISQFGVQQTESYFADLKHILNLLAD
                     FPTMGTSAEYIRGGLRMHTHQSHTIYYRIKADHIFIVRILHNQMNHKRYI"
     gene            10471..11259
                     /locus_tag="PXB09_001746"
     CDS             10471..11259
                     /locus_tag="PXB09_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchF/TatD family DNA exonuclease"
                     /protein_id="HDL5233842.1"
                     /translation="MKDLFIIDSHCHLDSLDYETRHKNVDEVIENAKARGVHHFISVC
                     TTVGRFEAMKNLTAHRNDVSLSCGVHPLNVEDEPFDYDKLFQFAQDPKVVAIGETGLD
                     YHYTPETKALQQSLFVQQIEIANKLNKPLIIHSRSARQDTMDMLEQNNAEKCGGVLHC
                     FTEDWAMAKRALDIGFYISISGIITFRNAEELREVVRKVPLDRLLVETDSPYLAPIPY
                     RGKPNQPAYVRETCEYVATLKGVSTEELARITTENVQHLFNIKL"
     gene            11269..11790
                     /locus_tag="PXB09_001747"
     CDS             11269..11790
                     /locus_tag="PXB09_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HDL5233843.1"
                     /translation="MRAILKYFLILVSLSFFIVLGGAVNYAMPSYEDTVVTGMEVRRM
                     DKDGIISKANPADGEVRDVYFLFTEDPETKKVMVYRNEDTGWGLPPYFKFGSADIQAK
                     AQAYANEKQRVQIKYYGWRINWLNEFRNIVSIKPLEEAETVSKPIMSYVLYAVLAFLF
                     FLSVQFIRGIFKD"
     gene            11865..12566
                     /gene="lpxH"
                     /locus_tag="PXB09_001748"
     CDS             11865..12566
                     /gene="lpxH"
                     /locus_tag="PXB09_001748"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDL5233844.1"
                     /translation="MTYYFIADLHLNENQPEITHLFLQFMQEKALLAEAVYILGDLFD
                     FWIGDDEQSELISTVKQAIKTLTTSGTKCYFICGNRDFLIGKRFSEQTGMVILPDYHV
                     IDLFGTSTLLCHGDTLCTDDVKYQQFRKKVHQKWRQAIFLMFPLSWRIRIAEKIRSKS
                     KQEKRDKSAEIMDVNAEVTAQIVAKYNTTQLIHGHTHRQAIHQHNGFTRIVLGDWKEN
                     YASILSVTEQGAEFI"
     gene            12563..13353
                     /locus_tag="PXB09_001749"
                     /pseudo
     CDS             12563..13353
                     /locus_tag="PXB09_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT         3974 a         2848 c         2784 g         3777 t
ORIGIN      
        1 gctgatttga gttattcacg cctaatttga aaaactatca catctttatc cacaaatggt
       61 ggggataact ctgctttatt tgcgaagcaa aaattgccct gcttattcat tttaaaattt
      121 aaacttattt tgacgagaaa aaacgcaaca acttgatctt tatccagatc attgcttaag
      181 aaaaagatcg catttttaga tctgattaat tgctctgttt tacaacgttc cgcctgttta
      241 tcctcaactt ataccactta tattcaatag ttatccacaa agttattcac aagcggttat
      301 attttatggt ttttttgcaa atcaacccaa agtatgaaac aattctccca ttctagaatt
      361 tttatcaatt aggtggtcga gtgatcgatt tcgatggcta ccgcccaaat gttggaatcg
      421 ttatctgtaa taagcacggg caagttctgt gggcaaaacg gtttggtcaa aactcttggc
      481 aatttccgca aggtggaatt aatgaggggg aaaacattga agcagcaatg taccgtgagc
      541 tttatgaaga ggtcggctta agtaaaaaag atgtacgatt gctttgggcg tctaaatatt
      601 ggctaaaata taaactgcca aaacgcttgg tacgtaatga aggctctggt cctgtctgta
      661 tcgggcaaaa acagcgttgg tttctactgc aattaatcgg tgatgaaagc ctgattaatt
      721 tgaaaaccac gaaaaatccg gagtttgacg gctggcgttg ggtcagcttt tggtatccag
      781 tccgccaagt ggtctctttt aaacgagatg tttatcgcaa agcgatgaaa gagtttgcac
      841 aggttttgca aaacaatatt caaaaagcga ctgacgataa aaccggtgag aaaccacgca
      901 ttgagcgtgg cgagacttcg ccccatactt ataaaaaaac ctctcaggat tctgccaaag
      961 cctataaacg agaagctcgt aagccttatc gtccttggca tcaacataat caaaaaggaa
     1021 aataagatga ctattttatt aagctgcctt tttttagggg tgtttgtcgg ctttttagcc
     1081 ggcttgttcg gcattggtgg tgggttaatc atcgtgccga gtttggtctt cctactgccc
     1141 atggcaggtg taccgccgga atatataatg tccaccgcac tcggcacatc attttcaacc
     1201 attattatta ccgcctttgc atcggcacaa cgccatcata agttaggcaa tgtcgatatc
     1261 caaaccagta aatattttat tccagcgttg atggtttcgg tttttctatc gggcttggtg
     1321 gtaagccgcc tcgatccgca actgatgtct agaatttttg cggtaatggt actttacctt
     1381 gcaggtaaaa tgattttttc aataaaaaga gcaccgaaaa ataaaccact taccgttcaa
     1441 acgacgataa tcggaggttc aatcatcggt gcgttagcca gtatggcagg gatcgcaggt
     1501 ggagccttta ttgtaccatt tttaaacgat cgaggcttag aaatgaaacg tgccatcggc
     1561 acttcctcat tttgcggagc atttttaggt ttatctggca caatcagctt tattgtaagt
     1621 ggctggggct tagaaggaat gcctgattat tctctcggtt atgtttattt accggctctg
     1681 tttggtatta cggcaacttc atttttcacc tcaaaaatgg gggcaagtgc cgccaacgct
     1741 ctacctgtgc cgatgctgaa aaaagccttt gcggtgcttt tggtctgtat cgccatcaat
     1801 atgtttttaa aataaggaca ctatgaacga acaatttatc caatttccac aaattagccc
     1861 gattgtgttt gaaatcggtc cgattgccct gcgttggtat gggctaatgt atttagccgg
     1921 ctttgccttt gcctactggc tgggaatgag acgggcgaaa aattccaatg gagtttggac
     1981 aaccgagcaa gtggatagct tagtctatac ttgcttctgg ggcgtagtat taggtgggcg
     2041 tatcggcgat gtgttctttt atagcttcga ccgtttctta caagatccgc tctacctctt
     2101 tcgcatttgg gaaggcggaa tgtcctttca cggcggttta atcggcgtca ttgtagcaat
     2161 gatttgggtt tcctaccgcc aaaaacgcaa tttctggcag acagcagatt ttatcgcacc
     2221 gctagtaccg ttcgggctag gtatggggcg tatcggcaat ttcattaacg atgaactttg
     2281 ggggcgtgta accgatgtgc cttgggcggt gttatttcca agcggtggct atcttccccg
     2341 ccacccgtca cagctttatg aagccttttt agagggtgtg gtgttactct ttatcctcaa
     2401 ctggtttatt caaaagcctc gcccggcagg tgcggtttca gggttatttt taatcggcta
     2461 cggcacattc cgctttattg tggaatactt ccgagaaatc gaccataacg tcaataccac
     2521 cgcagattta atcactcgtg ggcaactact ctctttaccg atgattatcg gcggcatact
     2581 gattatggcg tgggcgtata aagtaaacaa agtgaaataa acgtaggggc aagtcaatat
     2641 ttgccctcat tacaaaaatt gcaaaaaatt tgcagaaaac gaccgcttgt gtttgaagga
     2701 tatactatga gtaaaaaata caaagtcatc ggtttcgact tagacggaac gctaatcaac
     2761 accctccccg atctcactct tgtcgccaat tcaatgtttc tagaagccgg tttgccaacg
     2821 gttacacaag aaaaagtgct gacttggatc ggtaaagggg cagatatttt cttccaaaat
     2881 gcggttgctc acaccggcag aattttccaa gccgatgagt tggtgaaaat gcgagtgagc
     2941 tttgataaat actacgccac ctatgtgtgc gaggaaagca cccttttccc aaatgtgaaa
     3001 gaaaccttag aaatcctcaa agcaaacgac tacccgctgg tggtgattac caacaaaccg
     3061 accaaattag tcgagccggt gctttccgct ttcggcattt atcatttatt cgatgaaacc
     3121 cttggtgggc aatcgctccc caaaatcaaa ccgcaccctg acccgatgtt ttttatctgc
     3181 gaaaaattcg gcattacccc atcagaatta ctttttgtcg gcgactcaga aaatgacgtg
     3241 attgccgcca aagccgccgg ttgtgatgtg gttggactaa cttacggcta taactacaat
     3301 gtgccgattg aacaatctaa cccgactttt gtgacatctg aatttaaaga tgtgttgaaa
     3361 attgtggggt tataaagaaa acatttgttt tcttttgatg tttgctttag actttccgaa
     3421 cctaaagatt taaaggagta aagtatgcca acaatcgcat tacgtcaggt cggtggctcg
     3481 gttgcaatgg tgattccgcc tgctttttta gaggcactca agctctccgt cggtagcaaa
     3541 gtggatttgt ctttaaacga caaccaactc gtgattaatc ctgcccgccc aaaagtgaaa
     3601 tacagcttag aggaattatt aagacaatcc gattttgagg cagcaaggaa tgaagaaagc
     3661 caatcgtggt tatccgagcc ggcaatagga aaagaaattt tatgaaacgt ggcgatattt
     3721 actggctcga tcttgatcca accttaggac acgaacaatc aggcttccgc cccgttgtaa
     3781 ttgtttccgc aactgcattt aatctagcca gtaaactgcc tgtggttgtg ccgattacta
     3841 acggtggagc ttttgctgaa agactgggct ttgccgtttc attaaaagat gccggcttaa
     3901 aaacaacagg gattattcga tgcgatcaac ctcgcacagt cgatattgca caacgccatg
     3961 gaaaatttat cgaagcctta cccgaaagcc tacttgatga aattatggca agggtttcag
     4021 tgatttttga gtaagataca agcggtctga tttgctctat tttttgcaaa atcatcaata
     4081 aatctgaccg cttgtacttt tatcccttcc caataaccgt taagataacc tatatttttc
     4141 aaatcaaacg agaagataaa atgagcaaac ctattgtatt tagtggcgtg cagccctcag
     4201 gtgaattgac tatcggtaac tacttagggg cgttacgcaa ctgggtgaaa atgcaagatg
     4261 attatgactg tgtatattgc attgtcgatc aacacgccat taccgttcgt caagatccgg
     4321 agtcgctacg caaatcaact ttagatgtgt tagccctgta tttagcttgt ggcattgatc
     4381 caaacaaaag cactattttt attcaatccc acgtgccgga acacgcccaa ttagcttggg
     4441 tgctgaactg ttacacctat ttcggtgaaa tggggcgtat gacgcaattt aaagataaat
     4501 cagcacgcta tgaagagaat gtcaatgtgg gcttatttac ttatccggta ttaatggcgg
     4561 cagatattct gctttaccaa gccaaccaag tgccggtagg cgatgaccaa aaacaacatt
     4621 tggaaatcac ccgtgacatt gccaaccgtt tcaatgcctt atacggcaaa aaagattccg
     4681 aaggcaacct gatcgagcct gtttttgcag tgccggaagt ctttattgcg aaatccgggg
     4741 caagagtgat gtcgctactt gagccgacca aaaaaatgtc aaaatcggac gataatcgta
     4801 acaatgtgat tggactattg gaagatccga aagcggtagc gaagaaaatc aaacgggcaa
     4861 tgaccgatgg cgatgaaccg ccagtagtgc gttatgacgt acagaataaa gccggtgtct
     4921 cgaatttatt ggatattctc tccgccatta ccggcaaaac cattgccgaa ttagaaaccg
     4981 aatttgaagg caaaatgtat ggtcatttga aaacagaagt agcagataag gtttccgaac
     5041 tattaaccaa tctgcaagaa cgttatcacc actaccgcca agatgaagca ttattggaaa
     5101 aaatctaccg tgaaggggca gaaaaagctc gagctcaagc caaagcaacg ttagataagg
     5161 tatatgaatt agtcggtttt gtgcgttact aacacttaat gaaaaatgct cttgaggatt
     5221 caagagcatt tttgcaaaaa agaaccgatt gtcaattatt tacgggcgtt ataaatcttc
     5281 attgcttccg gcacaaggcg ggctaagttt tcttgacggt cagcatttga tgggtgagtt
     5341 gagaaaatgg acaagcctga atcgccattg gctttactca tttttaccca aacattcggc
     5401 gctgctgatg ggttgtagcc tgattctgcc attaaaatta acccaacttc gtccgcctca
     5461 gtctcttggc tgcgagagaa tggcttggtg gcaatcaaat ccacgccagt gctgagtaaa
     5521 ccttcggtgc ttacgcctgt tgaggcagtc acagccacat ctgcaatagc acctacaata
     5581 ctggtaatag cgctaaccgt acggtctgat ttaccgtgtt ctttcagtgc gtgagccatc
     5641 tcgtgtccca ttaccactgc aatttcatcg ttcgataaat taagtctttc cactaacccc
     5701 gtgtaaaacg ccattttacc gcccggcatc gcccacgcat tgagttcatc cgatttcaat
     5761 acggtaattt cccaatgaaa aggtacacca gtctggttgg ctctttccgc ataaggcttc
     5821 attttatgaa aaacagtgtg aatccgctta gcggtggcag acgaattgtc aatcgcattt
     5881 tgctgacgag cttgggtttt cacttgagca taactttgag ccgcttcttg gttaatgctt
     5941 tctgttgtgg cacaagcggt aatcactgtt gctaaaaaaa ctgaataact taattttttg
     6001 atgaatttca ttttatatcc cacaaaaaat gccaaacaaa tttgcttggc attcaaaaat
     6061 aaataattat ttcttagcac gctcgaatga ttctaagatt tcttggcgag cttcgtttac
     6121 atcgccccaa ccttctactt tcacccattt gcccgcttct aatgctttat agctttcgaa
     6181 gaagtgctgg atttgtgctt ttaataacgc cggtaagtca cctacatctt tgatgtggtc
     6241 atactcttta cttaatttgg tgtgtggaac agcaaccact tttgcatcac cgccggcttc
     6301 atcggtcatt tttaacacac cgacaggacg gcaacgaatc accgaacccg gttgtaacgg
     6361 atatggtgtt ggcactaata catcaaccgg gtcaccgtct gatgataagg tgttattcac
     6421 ataaccatag tttgccggat agaacattgc ggttgccata aagcgatcca caaataatgc
     6481 cccggtttct ttgtccactt catatttgat tggatcagag tttgccggaa tttcaattac
     6541 aacataaata tcgtccggta attctttacc ggcaggaact aattctaagc ccattttggt
     6601 ttccttctat aataggtgaa ataaacggcg tgattatagc ctattttcag aaaaagataa
     6661 aagcccgttt ctcttttcat tttccgccaa caaatccggc taattttttg ctaaattgct
     6721 tacaaaccgc acactcaacc atttttcgat aaaaaaaact tgccaaagtt ttaaaaatcc
     6781 gtaagatatg ccctcgttac gcaagattat gggtcattag ctcagccggt agagcagcgg
     6841 acttttaatc cgttggtcga aggttcgaat ccttcatgac ccaccattaa tcttcaaaac
     6901 acctctaagg gtcattagct cagtcggtag agcagcggac ttttaatccg ttggtcgaag
     6961 gttcgaatcc ttcatgaccc accattaatt tcaaaactcc tctgagggtc attagctcag
     7021 tcggtagagc agcggacttt taatccgttg gtcgaaggtt cgaatccttc atgacccacc
     7081 atttactcaa atcccatttg caaatttttc tgaaaaaaca accgctttat agtagaattc
     7141 agtcaatttt tatcactttt attttattca tcaatgctaa aaaaaatcct tattgcatta
     7201 ggcttagccg gcgttattgc ttgcggtgga ctgttttacg gctaccaaaa actcacctct
     7261 ttagccgaac acccgatcac ggttcagccg aatcaacttt tcgtattgga aaaaggcgtt
     7321 tccagccaaa aattagcggc tctgttagaa gagcaaggca ttgtcaccca cgatgacgcc
     7381 gatcttatcc cttatttaat gcgattatac cctgagttaa gcaaattcaa ggctggtgct
     7441 tattcactcg caggcttaac gacagtaaaa gatttgctcg ctcatttaag ctccggcaaa
     7501 gaagtgcaac ttaacgtgca atttattgag ggcaaaactt ttaaaatttg gcgggaacaa
     7561 ctagcgaaag ccgattattt acagcacacg ctacaaggca aatcggaaaa agaaatcgct
     7621 gacttactcg gcattccaca cgaaaaaatc gaaggttgga tagccccgga tacttacaac
     7681 tacacgccca attccaccga tttagccttg cttaaacggg cttatcaaaa gcagaaaacg
     7741 gcgttggaac aggcttggaa aaatagagcg gaaaatctac cgcttgcaac accatacgaa
     7801 atgctgattc ttgcctcgat tgtggaaaaa gagaccggca ttgcgaccga acgcccacaa
     7861 gtggcatcgg tctttattaa ccgtttacgc aacaatatgc gactgcaaac cgatccaacc
     7921 gtcatttacg gaatgggcga tcgttataac ggcaatatcc gccgcaaaga tttagaagag
     7981 gcaacgccat acaatactta ccagattgac ggcttaccgc caacgccgat tgccatgccg
     8041 agtgaagctt cgattaaagc ggttgccaac ccggataata caccctacct ctattttgtg
     8101 gcagacggca cgggcggtca taaattcagc aaaacactga atgagcataa taaagcggtg
     8161 gcagaatgga ttcaaattga acgcaaacgc aaaaatgaac aaaaatagtg agaacaatat
     8221 gcgtggaaaa tttattgtaa ttgaaggctt agagggcgca ggcaaaacga ctgctcacca
     8281 agtgattctc aaagagttgg aacaagccgg cattaatgac gtagtaatga cccgagaacc
     8341 cggcggcacc ccccttgccg aaaagttacg ccatttaatt aaacacgaaa ccgaagaagc
     8401 cattaacgat aaggctgagc tgctaatgct ctacgctgct cgtgttcaat tagtcgaaaa
     8461 tgtgatcaaa cctgcccttg ccgaaggcaa atgggttctg ggcgaccgcc acgatatgtc
     8521 ttcccaagcc tatcaaggcg gtggacgtaa gttggatcgt cacttactcg aaaccttaaa
     8581 agaatcggta ctcggcacat tcgagccaga tttaacgatt tatctcgatc tcgatccggt
     8641 gattggttta gaaagagcca gaggcagagg cgaattagac cgcatcgaac agcaaagcct
     8701 tgacttcttc taccgcacac gagagcgtta tttagaatta acccaacaca acgataaagc
     8761 cgtgatcatc aatgccgaac aacccatcga acaggtgact gcggatattc aacaagtaat
     8821 tagaaactgg ctgaaataat gtacccttgg ctcgaaagca cttatcaaca acttaccgat
     8881 tcatttttac agggtcgagg tcatcacgcc ttactgttca aaacagatgt tggtcttggt
     8941 acagacacct taatctacaa ggtggctgaa tggttgcttt gcagccaaaa actccgccat
     9001 caaccttgtc ttgaatgcaa aagttgcctg cttatgcaaa gcaacaacca ccccgatttc
     9061 cacattcttg agccgattga agacaaagat attggtatcg accaagtgcg tgagttgatt
     9121 tataaactcc agaatttcgc ccaacaaggg ggaaatacgg tcgtttatat tcgaggagtt
     9181 gatcgtttaa ccgaggcaag cagtaatgcc ctgctcaaaa ccttggaaga gccacgtgaa
     9241 aacgtctatt tcttgctcga agcaccgctt caagcaacag ttttagctac cattcaaagc
     9301 cgcagccaaa cttgggtact ttacgcccca caagcctcag aagtaatggc ttggctacaa
     9361 acacaatttc cggcaatctc aaccgacgac ttagagattg cactccgcct ttgccactca
     9421 cgcccactaa tttgcaaaaa ttttatcgaa aatgaccgct tgcaacagcg aaaaaccttt
     9481 ttgcaaacct tctggcgttt ctacaaaagc cacgatgtct tcttgttatt ccaagccttc
     9541 gcccaagaaa aagagctgat tttacagcaa ctcgaatggc tggaaagttt ctttagcgat
     9601 gccctaaaag ctaaaatggc aatcagccac ggttggctaa acccggatct ccaaaacggc
     9661 attctccctt ttagccaaca actaacgacc cacggcttac ttaaagggca tcaaattctc
     9721 caacaaaccc agcgggattt aaccgaaatt aacgccgtca atccggaatt gatgttgcta
     9781 gattgcctga cgaagttggt tttggtgttt gagtaaaagc cctctctcat agaaggtagc
     9841 tttcaattag ccgtaaaaag aggcttctag ccctagaata tagtttataa cttgcaaaat
     9901 tatctatctt tgttattgta tgaataattc acacaaggag aatattatgg caagaacaac
     9961 cagcgtgact ttaggcgaac ctttaaatga ttttgtaaat gaaatggtgg caagtgggcg
    10021 ttatggctct accagtgaag tagtgagaac cgctttacga atgcttgagg aaaaagagca
    10081 atacttagct cagttgcgac aagccattga tgatggtgat gctagtggtt atgcaaccga
    10141 aacgattgat gaaatgatgt tgagagtaaa ggcggaactt aatgtataaa ctttctgctc
    10201 aagcactccg agatcaagag aaactttttc gttacagtat ctctcaattt ggtgttcaac
    10261 aaacagaatc ttattttgca gatctaaagc atattttgaa tttattagct gattttccaa
    10321 caatgggaac ttctgcggaa tatattcgtg gtggcttgcg aatgcacaca catcaatctc
    10381 atacaattta ttatcgaata aaagcagatc atatatttat tgttcgcatc ttacataacc
    10441 aaatgaatca taaacgctat atttagaaaa atgaaagact tatttatcat agactcacat
    10501 tgtcatctag attctctaga ctacgaaact cgtcacaaaa acgtggacga agtaattgaa
    10561 aatgccaaag cccgaggggt gcatcatttt atctcggttt gcactacagt tgggcgtttt
    10621 gaagcaatga aaaacttaac cgcccatcgt aatgacgttt cactttcttg tggcgttcac
    10681 ccgttgaatg tggaagatga accttttgat tacgataaat tatttcagtt cgctcaagat
    10741 ccgaaagtgg ttgccattgg ggaaactggt ttggattatc actacacacc ggaaaccaaa
    10801 gcgttgcaac aatcgctttt cgttcaacaa attgaaattg caaacaaact caataagcca
    10861 ctcattatcc attctcgttc ggcacgccaa gatacgatgg atatgttgga acaaaataat
    10921 gccgaaaaat gcggtggggt gttgcattgc tttaccgaag attgggcaat ggcaaaacgg
    10981 gctttagaca tcggctttta tatctcaatt tcgggcatta ttactttccg caatgcagaa
    11041 gaactccgag aagtcgtgcg aaaagtgccg ttagatcgct tattggttga aacagattcc
    11101 ccttatcttg ccccgattcc ttatcgtggt aagccgaacc agccggcgta tgtgcgggaa
    11161 acttgcgaat atgtggcgac attaaaaggc gtttcaactg aagaattagc tcgcattaca
    11221 accgaaaatg tgcaacactt attcaacatt aaattataag gaactaatat gagagcaata
    11281 cttaagtatt ttctgattct tgtctcacta tcatttttta ttgtattagg cggtgcagtt
    11341 aattatgcaa tgccaagtta tgaagatacc gtagtaacag gtatggaagt acgccgaatg
    11401 gataaagatg gtattatcag caaagcgaat cctgctgatg gcgaggtgcg cgatgtttat
    11461 ttcttattca cggaagatcc tgaaaccaaa aaggtaatgg tttatcgtaa tgaagatacc
    11521 ggctgggggt tgcctcctta tttcaaattc ggatctgccg acattcaagc caaagctcaa
    11581 gcctacgcta acgaaaaaca acgtgtgcaa attaaatatt acggctggcg aatcaattgg
    11641 ctaaatgaat ttagaaatat tgtttcaatc aagccattag aagaagcaga aacagtcagc
    11701 aaaccaatta tgagctatgt actttatgcc gtattggcgt tcttgttctt cctctcagta
    11761 caatttattc gtggcatttt taaagattaa tgccgattaa cctttgacaa acggttcgat
    11821 tttgtaaaaa attgaaccgt tttctttttt atcaacaata tcaaatgacg tactatttta
    11881 ttgccgatct ccacttaaat gaaaatcagc ctgaaattac ccacctcttt ttgcaattta
    11941 tgcaagaaaa agcactactt gcagaagcgg tttatatctt aggtgatctg tttgatttct
    12001 ggattggcga tgatgagcag tctgaactca tttcaaccgt taaacaggca atcaaaaccc
    12061 tcactacaag cggtacaaaa tgctatttta tttgcggaaa tcgtgatttt ttaattggca
    12121 aacgattcag cgaacaaacg ggtatggtta ttttgcctga ttatcacgtt atagatttat
    12181 tcggcacatc taccttgctt tgccacggcg atacgctttg tactgatgat gtgaaatatc
    12241 aacaatttcg taaaaaagtc caccaaaaat ggcgacaagc tatctttttg atgtttccgc
    12301 tttcttggcg aattcgtatt gcggagaaaa ttcgatccaa aagcaaacaa gaaaagcgtg
    12361 ataaatccgc tgaaattatg gacgtaaacg ctgaagttac cgctcaaatt gtcgcaaaat
    12421 acaatacaac tcaacttata cacgggcata cgcatcgaca agcaatccat cagcataatg
    12481 gatttacccg cattgtatta ggcgactgga aagaaaatta cgcctctatt ttaagcgtaa
    12541 ccgagcaagg agctgaattt atatgattaa tgtgattatt ccttgctata acgccgaaaa
    12601 cacccttgtt cgtgcagtgc aaagtgtatt aaatcagtct ggattaaatc tattgtggct
    12661 tattgatgat gcttcaacgg ataatacgct tgccttagct aaacatttac aagcccaagt
    12721 gcctgataaa attagagtgg aacaaatgcc tcaaaatggc ggtgttgcca aagcacgcaa
    12781 ctggggagca ttacaaagtg aaacagattt aattgccttt ttagatgctg atgatgctta
    12841 tgaaaacggg gcattgcaag ttgctgaaaa gatttttgag tttaaaccgg aaaccggctt
    12901 ggttcggtta gcattaaaac cggtaactta gatcaacgtt acagctctca ccctaatttt
    12961 gagttagctt ggcaatatat gcaaatgact ggtgcaggca acactgtatt tcggcgtagt
    13021 ttcttcctcg cttgtggcgg ctttccacaa catcagctct tccaagaatt aggtggagaa
    13081 gatggtgctt taggcatagc cactacacaa attagctctg tagctactgc atttaatgat
    13141 gtcggtgttt tacattactg ccgagagggt atgcacgcag aaagattatt aaatgcgatt
    13201 ttattcaacg aaaaagatcc caatgttact gaagaaaaag ttaaacaagc caacctaatt
    13261 accgaaaata ttgttaataa tattagaaat ctacaagact gtcttaatag taaagggatt
    13321 ggtattaagc cttatacgct tgaatggagc taaaaaagca tttgcagatt ttccctaaaa
    13381 aaa
//
LOCUS       DANLTI010000079        12585 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.079, whole genome shotgun sequence.
ACCESSION   DANLTI010000079 DANLTI010000000
VERSION     DANLTI010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12585
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.079"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            28..753
                     /gene="fkpA"
                     /locus_tag="PXB09_001750"
     CDS             28..753
                     /gene="fkpA"
                     /locus_tag="PXB09_001750"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5233845.1"
                     /translation="MLKTKLSLFTLIVGTLFSTNVMAEEKADPKFVDDSSYAVGVLMG
                     KNINGVIESQKDIFTYNQDKILAGVQDTLKKTGKLTDEDLQKQLKSLDAYLSAKEAKI
                     NEEKTKATVAAGDKFRADYKKQSGVKETASGLLYKIEKAGEGNSPKAEDTVKVHYKGT
                     LTDGTVFDSSYDRGEPIEFQLNQLIPGWIEAIPMLKKGGKMEIVVPPALAYGDRAAGK
                     IPANSTLKFEIELLDFKAADAKK"
     gene            850..1506
                     /locus_tag="PXB09_001751"
     CDS             850..1506
                     /locus_tag="PXB09_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5233846.1"
                     /translation="MTKKFTPFSDEDHAILASYFPMVDGIAALIGEHCEIVLHSLEFL
                     EHSAIYIANGHNTNRKIGSPITDRALKSLHHMATDSVSKPYFTKAKGGVLMKSITIAI
                     RNGKQHVIGLLCININLEVPTSQFLNSFIAPVDTASEVTFASSVEDLVSQTIQTTIDD
                     VMADRQISNNNKNRQIVISLFEKGIFDIKDSINQVAEKLDISRHTVYLYIRQIKQDND
                     "
     gene            1506..1883
                     /gene="tusD"
                     /locus_tag="PXB09_001752"
     CDS             1506..1883
                     /gene="tusD"
                     /locus_tag="PXB09_001752"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDL5233847.1"
                     /translation="MDYVLAIKSPVYGSQGAFLAYQVAEELLKANHTICQIFFFQEGV
                     SNANALVNPASDEVNLVEMWKKLAKLHRLPLHLCIAAAQRRGVVDEQISANATHNLAE
                     GFTLAGLGEFSQAVLKADRLLTF"
     gene            1885..2256
                     /gene="tusC"
                     /locus_tag="PXB09_001753"
     CDS             1885..2256
                     /gene="tusC"
                     /locus_tag="PXB09_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDL5233848.1"
                     /translation="MKKYKLAFLFTQPPFGSAVSREGLDALLAASAFCDEQEIAILFI
                     NDGVFNLIADQQPEKLLQKDHISTFKLLELYDLTECFICQESVSLRGLDNADWLLRML
                     QFKTHAEMIALLNQAEKVMTF"
     gene            2266..2541
                     /gene="tusB"
                     /locus_tag="PXB09_001754"
     CDS             2266..2541
                     /gene="tusB"
                     /locus_tag="PXB09_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDL5233849.1"
                     /translation="MLYTLSKANYDEETLNFFFSHLSENDAVVLWQDGVLQAVKSPQF
                     FAKLPRCYLLAQDVQARGLQEKLTAFQCISLSELVKLTAVYFPQVAL"
     gene            2657..3556
                     /locus_tag="PXB09_001755"
     CDS             2657..3556
                     /locus_tag="PXB09_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233850.1"
                     /translation="MVMAEENNTWVDKKHETVSTTLDRWANNINSWLGDADPDKPGTA
                     SLRVMLDSRWDKHDKFTYKPRVRGKIKLPILKKHLNVVFGDDELDNELTDKNHAGKLY
                     KNVNPNKRYNSREARDSNSSIGLRWSDGIKALGIETDLDAGIRSGSDIFGRLRISKDW
                     KITDQFSTRLEQIYRYGSESKHYLRTNFENKYTETDTTFIMNHTNFEYRHDVDEERSW
                     GNSLYRQHNFKPLTHISYGISMGGRLDKELSKFNYWGPFVSYRQPIWRNWLFIQPEIS
                     FYNDKDKDRKHFIQTFVRLEAIF"
     gene            3906..7931
                     /gene="rpoB"
                     /locus_tag="PXB09_001756"
     CDS             3906..7931
                     /gene="rpoB"
                     /locus_tag="PXB09_001756"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDL5233851.1"
                     /translation="MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPE
                     GQQGLEAAFRSVFPIVSNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRL
                     VSYDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTE
                     EILNLFFEKIKFEIADNKLLMTLVPERLRGETASFDIAANGKVYVEMGRRITARHIRA
                     LEKDNVTQIEVPVEYIVGKVAAQDYVDLSSGEVICPANMEISMEMLANLSQAGYNQIE
                     VLFTNDLDHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSA
                     ERYDLSAVGRMKFNRSLEIPEGVGSGILSNDDIIGVMKKLIEIRNGRGEVDDIDHLGN
                     RRIRSVGEMAENQFRIGLVRVERAVRERLSLGDLDGVTPQDLINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEG
                     PNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEESNNIIAQANSNLD
                     ENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQVVSVAAALIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKRGGTVQYVDASRIVVKVNEDE
                     TIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARGEILADGPSTDLGELALGQ
                     NIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPN
                     VGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDLAEELEILEAGLF
                     TRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEELRKEFERKLE
                     IKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYD
                     ENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAKLREYMQ
                     KAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLELGGLP
                     TSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKA
                     QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
                     SFNVITKEIRALAIDMELDEA"
     gene            8194..12477
                     /gene="rpoC"
                     /locus_tag="PXB09_001757"
     CDS             8194..12477
                     /gene="rpoC"
                     /locus_tag="PXB09_001757"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDL5233852.1"
                     /translation="MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPET
                     INYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRER
                     MGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
                     LTEEQFMDAEERWGDEFEAKMGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKI
                     TKRLKTLEAFLQSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLLDLVAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKG
                     KQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLENRGIA
                     STIKAAKKMVEREDPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQL
                     HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVV
                     LGLYYMTREKVNGKGEGMYFLDPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGELEA
                     KTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKKAISKLINESYRRLGLKESVVLADQ
                     IMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNK
                     VIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQ
                     LAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTDE
                     VLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCYGRDLARGHLINQGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIKLTNAKFVTNKEG
                     KIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVANWDPHTMPVIS
                     EVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDSNGKD
                     ILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLPRVADLF
                     EARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFEGEMV
                     QRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
                     KAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEA
                     GIAVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE"
BASE COUNT         3805 a         2427 c         2893 g         3460 t
ORIGIN      
        1 taacagttat ttttataagg aaaaattatg ttaaaaacca aattatcatt atttactctt
       61 attgttggca cactttttag tacaaatgtg atggcagaag aaaaagcaga tcctaaattt
      121 gtggatgatt cctcttatgc cgtgggtgta ttaatgggta aaaatattaa tggtgtgatt
      181 gagtcacaaa aggatatttt tacctataac caggataaaa tcttagccgg tgttcaggac
      241 accttaaaga aaaccggtaa attaaccgat gaagatttgc aaaagcagtt aaaatcgtta
      301 gatgcctatt tatctgcgaa agaagcaaag attaacgaag aaaaaaccaa agcaacggta
      361 gctgcaggcg ataaattccg tgctgattat aaaaaacagt ctggcgtaaa agaaacggct
      421 tcaggcctgt tatataaaat tgaaaaagca ggtgaaggca attcaccaaa agcggaagat
      481 actgtgaagg tgcattacaa aggcactttg actgatggca cggtatttga cagctcttac
      541 gaccgtggtg agccgattga atttcagtta aatcaattaa ttccgggttg gattgaagcg
      601 attcctatgt tgaaaaaagg cggtaagatg gaaattgtag tgccacctgc attagcttat
      661 ggtgatcgtg ccgcaggcaa aattccagca aattcaacct tgaaatttga aattgaatta
      721 ttagatttta aagcagcaga tgctaagaaa taattcgtta ttccttaatt attgaagata
      781 cgtaagcggt tagatttatt ataatatttg caaaaaatgt gataaaacta accgcttgta
      841 atttgtatta tgaccaaaaa atttacgcct ttttctgacg aagatcacgc cattcttgct
      901 tcttactttc cgatggtaga tgggattgcg gcactgattg gtgagcattg cgaaattgta
      961 ttgcattcgt tagagtttct ggaacattcg gcaatttata ttgctaacgg acacaatact
     1021 aaccgtaaaa tcggctctcc gattactgac cgtgcattga aatcgctgca tcatatggca
     1081 acggatagcg tctccaaacc ttattttacc aaggcaaaag gtggcgtttt aatgaagtct
     1141 atcactattg cgattcgtaa tggtaaacag cacgttatcg ggttactgtg cattaatatt
     1201 aatttggaag tgcctacctc acagtttctc aattctttta ttgcccctgt agataccgct
     1261 tcagaagtta cttttgccag ttcagtagaa gatttggttt cacaaacgat tcaaacgacc
     1321 attgatgatg tgatggcaga tcgtcaaatt tctaacaata ataaaaatcg tcaaattgtg
     1381 atttcgttat ttgagaaagg gatttttgat attaaagatt ccattaacca agtagcggag
     1441 aagctggata tttcacgcca tactgtgtat ctctatattc gtcaaattaa gcaggacaat
     1501 gattaatgga ttatgtatta gcgataaaat caccggttta tggttcacaa ggggcatttt
     1561 tagcctacca agtggcggaa gaattattaa aagccaatca tacaatttgc caaatattct
     1621 tttttcaaga aggcgtgagc aatgctaatg ccttagtgaa tccagcaagc gatgaagtga
     1681 atttagtcga gatgtggaaa aaattggcta aattgcaccg cttgcctctg catttgtgca
     1741 ttgctgctgc ccagcgtaga ggcgtggtgg atgagcaaat ctcagctaat gcaacacata
     1801 atttagccga aggatttacc ctagccgggt taggcgaatt tagccaagca gtattaaaag
     1861 cggatcgatt actgactttt taagatgaag aaatataaac ttgccttttt atttacccag
     1921 ccaccttttg gttcggcagt tagccgtgag gggctagatg ccttgcttgc agctagtgct
     1981 ttttgtgacg agcaagagat agctatcctc tttatcaatg atggcgtatt taatctcatt
     2041 gccgatcaac agccggaaaa actcttacaa aaagatcata tttccacctt caaattattg
     2101 gagttgtatg acttaactga atgttttatt tgccaagaaa gtgtaagttt acgagggctg
     2161 gataatgcag attggttact gcgaatgctt caatttaaaa ctcacgctga gatgatcgca
     2221 ttgctcaatc aagctgaaaa agtaatgacg ttttaaggaa tatttatgct ttataccctt
     2281 tccaaagcga attatgatga agaaacctta aacttctttt tctcacatct tagtgagaac
     2341 gatgcggttg ttctgtggca agatggcgtg ctacaagcgg tcaaaagtcc gcaatttttt
     2401 gcaaaattgc cccgttgcta tttattggca caagatgtgc aagctcgagg attgcaagag
     2461 aagctcactg catttcagtg catttcatta tccgaattag tcaaattaac agcggtttat
     2521 tttccccagg ttgcactgta acctagagag gatatttttt gtaataccaa ataatttaga
     2581 ttatgatgtg attcctaaaa aggagaatat tatgaaaaca aaatgtctta ttccgctact
     2641 agcacttaca cctgttatgg tgatggcaga agaaaataac acttgggtag acaagaaaca
     2701 tgaaacagta agcactacct tagatcgttg ggcaaacaat attaacagtt ggctaggtga
     2761 tgcagaccca gataaaccgg gaacggcttc tttacgggta atgttagata gccgttggga
     2821 taaacacgat aaatttactt ataagccccg tgttcgtggt aaaatcaaac tccctatctt
     2881 gaaaaagcat ctaaatgtcg tatttggtga tgacgaactg gataatgagc ttaccgataa
     2941 aaatcatgct ggaaaattgt ataaaaacgt caatccaaat aaacgctata actctcgtga
     3001 agcgagagat tcgaactctt ctatcggttt acgttggtct gatggcatta aggctttagg
     3061 gattgagacc gatttagatg ctggtattcg ttcgggaagc gatattttcg ggcgtttacg
     3121 catcagtaaa gattggaaaa tcaccgacca gttcagtacc cgcctagagc aaatttatcg
     3181 ttacggttca gagagcaagc actatttacg tactaacttt gaaaataaat ataccgaaac
     3241 ggataccacc tttattatga accacaccaa ttttgaatat cgtcatgatg tagatgaaga
     3301 aagaagttgg gggaatagtt tatatcgtca acataacttc aaaccactca cgcacatcag
     3361 ctatggtatc agtatggggg ggcgtttaga taaagagtta tcaaaattta actattgggg
     3421 tccatttgtc tcctatcgtc aaccaatctg gcgcaactgg ctctttatcc agcctgaaat
     3481 cagtttttat aacgacaaag ataaagatcg taagcacttt attcagacat ttgtacgttt
     3541 agaggctatc ttctagctat taagcctcaa gtagaatctt ggggcttgtt tttgcaagcg
     3601 gtcaatttct tgccaaaatt tacaaaatcc gctataattc ctaaccattt ttagcaaaaa
     3661 ttggctgacg gcttgaccgg tcagcctttt gtgcttgaac gcaagggctg attttgtcat
     3721 tttaatcagc aaaatttgca aatttcctgc ccaatttgac cgcttgcagt agcgatttct
     3781 gactgcttga ttggcgattg gaaaatgaca tctcgtacag tttttataat gccacttcca
     3841 accgagtctt tcgtgtcgga ttgtgtaatc tcaaccaaaa tatatttcag aggctatctt
     3901 aaaaaatggc atattcatat tccgagaaaa agcgtatccg taagagcttt ggcaaacgcc
     3961 cacaagttct gaacgtacct tatctattaa caattcagct tgattctttt gaaaaattta
     4021 tcgaaaaaga tcctgaaggg cagcaaggtt tagaagcggc attccgttct gttttcccga
     4081 ttgtgagcaa caatggtgca acagaattac aatacgtttc ttacgaatta ggcgagccgg
     4141 tgtttgacgt gcgtgagtgc caaattcgtg gtacaaccta cgctgcacca ttacgcgtga
     4201 aattgcgttt agtctcttac gatcgtgaag ccgcagccgg tacggtaaaa gacattaaag
     4261 agcaaaacgt gtatatgggc gaaatcccat taatgaccga taacggtact ttcgtgatta
     4321 acggcaccga gcgtgttatc gtttctcaat tacaccgtag cccaggtgtg ttcttcgatt
     4381 ctgacaaagg taaaacccac tcttcgggta aagtgcttta taacgcacgc attatccctt
     4441 accgtggttc ttggttagat ttcgagtttg atccgaaaga taacttattt gcccgtatcg
     4501 accgccgtcg taaattgccg gcaaccatta ttctacgtgc attaggctac accaccgaag
     4561 aaatcttaaa tttattcttc gagaaaatta aatttgaaat tgccgataat aaattattga
     4621 tgacgttagt gcctgagcgt ttaagaggcg agactgcatc atttgatatt gcagcaaacg
     4681 gcaaagtata tgttgaaatg ggtcgccgta ttaccgctcg tcatatccgt gcgttagaaa
     4741 aagacaatgt gacccaaatt gaagtgccgg tggaatatat tgtcggcaaa gtagcggctc
     4801 aagattacgt tgatttatct tcaggtgaag tgatttgccc ggcgaatatg gaaatctcga
     4861 tggagatgtt ggcgaattta tcacaagccg gttacaacca gatcgaagta ttatttacca
     4921 acgatttaga ccacggtcca tatatttctg aaaccttacg tgttgatcca acttacgacc
     4981 gtttaagtgc gttggttgaa atctatcgta tgatgcgtcc gggcgaacca ccaacgaaag
     5041 aagcggcaga agcattattc gataatatgt tcttctcggc agagcgttat gatttatcgg
     5101 cagtaggtcg tatgaaattc aatcgctcgt tagaaattcc ggaaggcgta ggcagcggta
     5161 ttttaagcaa cgatgacatc atcggtgtga tgaaaaaatt aatcgaaatc cgtaacggtc
     5221 gtggtgaagt ggatgatatc gaccacttag gtaaccgtcg tatccgcagc gttggtgaaa
     5281 tggcagaaaa ccaattccgc attggtttgg tgcgtgtaga acgtgcggtg cgtgagcgtt
     5341 tatctttagg cgatttagat ggtgtaacac cacaagattt aatcaacgct aaaccgattt
     5401 cagcagcagt gaaagagttc tttggttcat cacaactttc gcaatttatg gaccaaaaca
     5461 acccgctttc agaggtaaca cataaacgcc gtatctcggc attaggcccg ggtggtttaa
     5521 cccgtgagcg tgccggcttt gaagtgcgtg acgtacaccc gactcactat ggtcgtttat
     5581 gtccaatcga aactcctgaa ggcccgaata tcggtttgat caactcacta tcggtgtatg
     5641 ctcgtactaa taactacggt ttcttagaga ctccattccg taaagtggtg aatggtcaag
     5701 taaccgaaga gatcgagtat ttatctgcga ttgaagaaag caacaatatc attgcacagg
     5761 cgaactcaaa cttagatgag aacttccgtt ttaccgatac ttatgtaact tgccgtcagc
     5821 aaggcgaatc gggcttattc aaaccggaag aagttcaata tatggacatc tcaacccaac
     5881 aagtggtttc tgtggctgcg gcgttaattc cgttccttga gcacgacgat gcgaaccgtg
     5941 cgttaatggg tgcgaacatg caacgtcagg cagttccaac cttgcgtgcg gacaaaccat
     6001 tagtcggtac cggtatggaa aaaccaattg ctcttgactc aggtgtagcg attgtcgcaa
     6061 aacgtggtgg tacggtgcag tatgttgatg cgtcacgcat tgtagtgaaa gtaaatgaag
     6121 atgaaaccat tccgggcgaa gcgggtatcg atatttataa cttaatcaaa tacacccgtt
     6181 caaaccaaaa cacctgtatc aaccaagtac cttgtgtgaa cttgggtgag ccggttgctc
     6241 gtggtgaaat cttagcggac ggtccttcaa cagacttagg tgaattggca ttaggtcaaa
     6301 atatccgtgt ggcatttatg ccttggaacg gttataactt cgaagactca atgttagttt
     6361 ctgagcgtgt ggtacaagaa gatcgcttta ccactatcca cattcaagaa ttatcttgtg
     6421 tggcgcgtga taccaaatta ggtgcagaag agatcaccgc tgatattcca aacgtgggtg
     6481 aatctgcatt aagcaaatta gatgaatcag gtatcgttta catcggtgca gaagtgaaag
     6541 gtggcgacat cttagtaggt aaagtaactc ctaaaggtga aacccaatta acaccggaag
     6601 aaaaactatt gcgtgcgatc ttcggtgaaa aagcctctga tgtgaaagat tcatcattgc
     6661 gtgttccaaa cggtacttca ggtacggtta tcgatgttca agtatttacc cgtgatggcg
     6721 tagagaaaga taaacgtgcg aaagaaatcg aagagatgca actgtgtgaa gcgaagaaag
     6781 acttagcgga agagttggaa atcttagaag ccggtttatt tactcgtgtt cgcaacctat
     6841 taattgaagg cggcgtaaaa gaatctgcat tagatggcgt tgctcgtgaa aaatggttag
     6901 aacaaaccct tgaagacgaa gcgaagcaaa atcagttaga acagttagcg gaacagcacg
     6961 aagagttacg caaagaattt gaacgtaaac ttgagatcaa acgcaacaaa attatccaag
     7021 gcgacgattt agcaccgggt gtgttaaaag tagtgaaagt ttaccttgcg gtgaaacgcc
     7081 aaatccagcc gggtgataag atggcgggtc gtcacggtaa caaaggggtt atctcgaaaa
     7141 tcaaccctgt ggaagatatg ccatacgatg aaaacggtca gccggttgaa atcgtattga
     7201 acccgctggg cgtaccgtct cgtatgaaca tcggtcagat cttagaaacc cacttaggct
     7261 tagcggctca tggtatcggt gatcagattg ataagatgat caaacagcaa caagaagtgg
     7321 ctaaattacg tgaatatatg caaaaagcct acgatttagg tcacggctca caagtcgttg
     7381 atttaagcac tttctctgat gaagaagtga tgcgtttagc gcaaaactta cgcaaaggct
     7441 taccgcttgc tactccggta ttcgatggtg cacacgaaag cgaaatcaaa ggcttattag
     7501 agttaggcgg cttaccgact tcaggtcaga tcacacttta tgatggtcgt accggtgaga
     7561 aatttgagcg tccggtaacc gttggttata tgtatatgct caaattgaac cacttggttg
     7621 atgataaaat gcacgctcgt tcaaccggtt cttatagcct tgttactcaa caaccattgg
     7681 gtggtaaagc tcaattcggt ggtcagcgtt tcggtgagat ggaggtttgg gcattagaag
     7741 catacggtgc ggcttatact cttcaagaaa tgcttacggt gaaatcggac gatgtgaacg
     7801 gtcgtacgaa gatgtataaa aacattgtag atggtacaca ttatatggag ccgggtatcc
     7861 ctgaatcctt taacgtaatt accaaagaga tccgtgcatt agcaattgat atggagctgg
     7921 acgaagcgta atggtttcac tctccccctt gatgggggag agacaggcaa aggatttgtt
     7981 cagaatcctt tggcagagag agggtgatgc aagcggtgta aatttgctaa atttttgcaa
     8041 aaatcgaccg cttaccctct ccctgatttt gcttctgaac gaggcaaaat ctatccctct
     8101 cccacaaggg gagagggttt aaaatcgcaa ccaaattcgt agagtggata ttctttccac
     8161 caaacaaaac aacctcaaac taggggcaaa aaagtgaaag acttagtgaa gtttttaaaa
     8221 gcacaaacaa aatcgaacga agattttgat gtgattaaaa ttggtttagc atcaccggac
     8281 aagatccgtt cttggtcttt tggtgaagtg aaaaaaccgg aaaccattaa ctatcgtacc
     8341 ttcaaaccgg agcgtgatgg tttattctgt gcacgtattt tcgggccggt aaaagattac
     8401 gagtgcttgt gtgggaaata caaacgttta aaacaccgtg gcgtaatttg tgaaaaatgt
     8461 ggtgttgaag taacccaaac taaagtacgt cgtgagcgta tggggcacat tgaattagct
     8521 tgccctgtcg cacacatctg gttcttaaaa tcactaccgt cccgtatcgg tttaatctta
     8581 gatatgccgt tgcgtgatat tgaacgtgtg ctttattttg aatcttatgt agttactgaa
     8641 ccgggaatga ccgatttaga gaaaaatcag ttattaaccg aagaacaatt tatggacgct
     8701 gaagagcgtt ggggtgatga atttgaagcg aaaatgggtg cagaaggtat ccaagcatta
     8761 cttcgtgatt tagatttaga acaccaatgc gaaaccttgc gtgaagagtt acaagaaacc
     8821 aattcagaaa ccaagcgtaa aaaaatcact aagcgtttaa aaaccttaga agcattctta
     8881 caatccggca acaaaccgga atggatggtg atgacagtat taccggtact tccaccggat
     8941 ttacgtccgt tagtaccgct tgacggtgga cgttttgcga cttctgactt aaacgattta
     9001 taccgccgtg taattaaccg taacaaccgt ttaaaacgct tgttagattt agttgcaccg
     9061 gacatcatcg tgcgtaacga aaaacgtatg ttacaagagt cggttgatgc gttattagac
     9121 aacggtcgcc gtggtcgtgc gattaccggt tcgaacaaac gtccgttaaa atctttggca
     9181 gatatgatca aaggtaaaca aggtcgtttc cgtcaaaact tattaggtaa acgtgtagat
     9241 tactcaggtc gttcggtaat taccgtaggc ccatacttac gcttacacca atgtggttta
     9301 ccgaagaaaa tggcgttgga attattccgt ccgtttatct actcaaaatt agaaaaccgt
     9361 ggcattgctt caactattaa agccgcgaag aaaatggtag agcgtgaaga tcctatcgta
     9421 tgggatattc ttgccgaagt gattcgtgaa cacccgattc tacttaaccg tgcaccaaca
     9481 cttcaccgtt taggtatcca agcgtttgag ccgttattga ttgaaggtaa agcgatccag
     9541 ttacacccac tcgtgtgtgc ggcgttcaat gcggacttcg acggtgacca aatggcggtt
     9601 cacgttccat taacccttga agcacagtta gaagctcgtg cgttaatgat gtcaaccaac
     9661 aacgtacttt caccggcaag tggtgatccg attatcgtac cgtctcagga cgttgtactc
     9721 ggtctttact atatgacccg tgagaaagta aacggtaaag gtgagggaat gtacttcctt
     9781 gaccctcgtg aagcggaaaa agcataccgt accggtcagg ctgaattaca ttctcgtgtt
     9841 aaagtgcgtg ttactgaata tgagaaaaac gaagcaggcg aattagaagc aaaaacttcg
     9901 ttagtagata ccaccattgg tcgttcaatc ttatggatga ttgcaccaaa aggtatgccg
     9961 tttagcttgt tcaaccaaac cttaggcaaa aaagcgatct cgaaattaat taacgagagc
    10021 tatcgccgtt taggtttaaa agaatctgtg gttttagctg accaaattat gtacaccggc
    10081 tttgcttatg ctgctcgttc tggtgcctca gtaggtatcg acgatatggt aattccggag
    10141 caaaaatacg caatcattga agcggctgaa gcggaagtcg ctgagatcca agagcaattc
    10201 aacggcggtt tagtaacagc cggtgagcgt tataacaaag tgatcgatat ttgggctgct
    10261 gcaaacgaac gtgttgcgaa agcaatgatg gaaaaccttt caacggaaga agtaatcaac
    10321 cgtgaaggta atccggaaaa acaagcctca tttaacagta tctttatgat ggcggactcc
    10381 ggtgctcgtg gttctgctgc acagattcgt cagttagcgg gtatgcgtgg cttgatggct
    10441 cgtccggacg gttcgattat cgaaacccca attactgcaa acttccgtga aggtttgaac
    10501 gtattacagt actttatttc aacccacggt gcacgtaaag gtcttgccga tacggcatta
    10561 aaaacagcga actccggtta cttaacccgt cgtttagttg atgtggcaca agatttagtt
    10621 atcattgaag atgactgtgg tacgcacgaa ggtatcgtga tgacaccact tatcgaaggt
    10681 ggtgatgtga aagaagccct gcgtgatcgt gtattaggtc gtgtggtggc agaagatgtg
    10741 ttaaaaccgg gtacagatga agtattaatt ccacgcaaca ccttattaga tgaaaaatgg
    10801 tgtgatgtgg tggatcgtga atctgtggat gtgatcaaag tacgttcggt agtaacttgt
    10861 gatacagact tcggtgtgtg tgctaaatgt tacggacgtg acttggctcg tggtcactta
    10921 atcaaccaag gtgaagcggt cggtgttatt gcggcacaat ctatcggtga gccgggtaca
    10981 cagttaacga tgcgtacgtt ccatatcggt ggtgcggctt ctgcggcagc aaaagaatct
    11041 agcatccaag tgaaaaacgc aggtacgatt aaattaacca acgctaaatt tgtaaccaac
    11101 aaagaaggca aaatcgtatt aacttctcgt aatactgaat taactgtcat cgacaccttc
    11161 ggtcgtacca aagaaaacta taaagtgcct tatggtgcgg tgctttctaa acacgacggt
    11221 gcagaagtgg ctgtgggtga agtggttgcg aactgggatc cgcacacaat gccggtaatc
    11281 tcagaggtat caggtcgtat ccaatttagc gacatcgtag atggcttaac cgttactcgc
    11341 caaaccgatg aattaaccgg tttatcatct atcgtggtgc aagatgtggg tgaacgtgca
    11401 accgcaggta aagatttacg tccggcatta cgcttagttg atagcaacgg caaagacatc
    11461 ttaattccgg gtacagacgt tgcagcacaa tacttcttac cgggtaaagc aatcgtaacc
    11521 ttagacgatg gtgcagaaat tgaagtcggt gaagccttag cccgtattcc acaagaatct
    11581 gtggggacga aagatattac cggtggtctt ccacgcgtag cagacttatt cgaagcccgt
    11641 aaaccgaaag agccggcaat cttggcggaa atttcaggta ttgtgtcgtt cggtaaagaa
    11701 accaaaggta aacgccgctt ggtaattact ccggcggaag gcgaagcgtt tgaagagatg
    11761 attccaaaat ggcgtcagct caacgtattt gaaggcgaga tggtacaacg tggtgatgtg
    11821 atatcagacg gtgcagaaac tccgcacgac atcttacgct tacgtggcgt tcacgccgtt
    11881 accgactaca tcgtaaacga agtgcaagaa gtttaccgct tacaaggggt aaaaattaac
    11941 gacaagcaca tcgaagtgat tgttcgccaa atgttgcgta aagctgtgat caccaacgct
    12001 tacgactctg aattcttaga gggcgaacaa gtggaagtgg ctcgtgtgaa aattgccaac
    12061 cgcaaacgtg ctgaagaagg caaaccgttg gtagaatttg aacgtgaatt gcttggtatt
    12121 accaaagcat ctcttgcaac agaaagcttt atttctgcag cctcgttcca agaaaccact
    12181 cgagtgctta ccgaagccgc agtggcaggt aaacaagatg aattgcgtgg cttaaaagag
    12241 aacgtaatcg ttggtcgctt aatcccggca ggtaccggtt ttgcttacca ccaagcacga
    12301 gctaaaaaac gtgcccaact ggaagcagga attgcagttg tccctgaatt tgaagcaccg
    12361 gcagctaaag ccaattcatt cgttaccgat gcagacatcg aagctgaatt tgaatttgtt
    12421 gcagacgatg caacccaaag tttagcagcg ttgttaaatg cgggtgagga agagtaatag
    12481 ctcgtagggt atgataaatt aaaaaatctc ctagaatata atttctagga ggttttctac
    12541 ttgaatataa gggaaaaata tatagaatgt aagggcttat tcaat
//
LOCUS       DANLTI010000080        12042 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.080, whole genome shotgun sequence.
ACCESSION   DANLTI010000080 DANLTI010000000
VERSION     DANLTI010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12042
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.080"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(11..808)
                     /locus_tag="PXB09_001758"
     CDS             complement(11..808)
                     /locus_tag="PXB09_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL5233853.1"
                     /translation="MENFEKQFISLFQRIVPHYRRSEVFYDFITLSALDMYLVTYRDQ
                     AEPNLRERFAHAKARYSDSEFTQLAELLAVTVNALTQKRYDFLGSVFMNLNLGDGYRG
                     QYFTPSHIADLMAKVTLQDCDRIISQQGFVTLSEPTCGSGVMVIGCVNAMFDAKYNPQ
                     QQLWVHCQDVDFTAAMMCYIQLSLLHIPACIVVGDTLLNETKIQMYTLAHLMGNWSHK
                     LEQQIAPLVNSTTEKGCGNNIEKSVIVEDLSQISILDEIDDNELIFY"
     gene            complement(881..1627)
                     /locus_tag="PXB09_001759"
     CDS             complement(881..1627)
                     /locus_tag="PXB09_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233854.1"
                     /translation="MPNWCENKLQIFCDCIQAKQIIPKLFRKTESDKWCLDFELLVPM
                     PESICIESSSLGDRAMEFLKISPNRRLTRPLLKKYIYGSEIDRIYAKAKHHRWDVGHF
                     INWLIKRPEQQSILWLNLALGQQYLSNLAQHGYKDWYDWSNEQWGCKWNVCSDSCQVS
                     FNDNGSINCLFDTPWGPPDGWFQALCTAFPDIEFILSFFEPGMWFAGKYIANLDGSYC
                     NIYIDDRGIRSFAEEVFNEEFEDEFEEKLE"
     gene            complement(1767..2741)
                     /locus_tag="PXB09_001760"
     CDS             complement(1767..2741)
                     /locus_tag="PXB09_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5233855.1"
                     /translation="MNTQTKFDLYQHITDRIVAALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEYGYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDK
                     REKLDEEGNIVYDEEGNPEIEQHFFIKKHNLFNLDQCENLPEELYDPISEPKQPTSDP
                     NQYEIFADIRQIIKGMDLHVEMKPSNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHE
                     MTHATGAAKRLDREGITSGKAKFGNKVYAFEELVAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVIKEDKRAIVRASGKAREACQYMLDALNISQLADKNEVFEEAA"
     gene            complement(2986..3393)
                     /locus_tag="PXB09_001761"
     CDS             complement(2986..3393)
                     /locus_tag="PXB09_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5233856.1"
                     /translation="MKHDLDLLKYIWDNRNLNNKAYQYLFHICIEPMRKGDWNRYTIW
                     LNNNGNLVNISAVVYEIVSSQQLKDDIKLWQDMQFHCRPVKVETTGFISFLLHQFFNG
                     ITHVLLEQGMITETEAAEKSYHFIAANSFQRLL"
     gene            complement(3509..4351)
                     /locus_tag="PXB09_001762"
     CDS             complement(3509..4351)
                     /locus_tag="PXB09_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233857.1"
                     /translation="MSGSVLNTYFKHALVKAGFPNCLNIEYSLSHCQGDGVAFYGRLN
                     TETLINLFNKLNPQKRTQKMFSNLLNHIESWEPHYGVDFEIIRNSFGYRYSHCNTMEL
                     SVRTADDLAFFYDRDARKEWYFPTSKVEKYKALWDGFIQDLGQYIKDTSCALESNGYQ
                     IIEASPYQTETIFKFNTENYLIELKRKSSEFYSESVDWLCGDVCDFEAMIEEILQGKL
                     CYADFVATVTDKESGIQLGSDEITGVSYSPTDHSLSGYRQELISNAIASARSNAARFA
                     YLHA"
     gene            complement(4429..4824)
                     /locus_tag="PXB09_001763"
     CDS             complement(4429..4824)
                     /locus_tag="PXB09_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233858.1"
                     /translation="MARKKIQYTETDLHLYSVLWNLRHAHDLFSVKLERETKFGKAFS
                     VFSRFDVCPSYGEVDITYLVVKAGIRKTLRGFAYVGGNGFSHSRHLMSTFMYLVREIL
                     VEHNWISETELYDQPISVYKFRAINFDKW"
     gene            complement(4923..5168)
                     /locus_tag="PXB09_001764"
     CDS             complement(4923..5168)
                     /locus_tag="PXB09_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5233859.1"
                     /translation="MLVHIRLSCIGDVLPTKLNEWTSEHQALQQEISHRALEAWQNRD
                     KDIKSVRFMQQMPSRQGLNFRFLSVSEQNGKLIVSRA"
     gene            complement(5240..5593)
                     /locus_tag="PXB09_001765"
     CDS             complement(5240..5593)
                     /locus_tag="PXB09_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233860.1"
                     /translation="MSQQTAGWDVIPFESSKTVKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFWTLLAAIIAF
                     VCGMAAVFGTQLSLI"
     gene            5967..6410
                     /locus_tag="PXB09_001766"
     CDS             5967..6410
                     /locus_tag="PXB09_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233861.1"
                     /translation="MKVSRFLGYCSIVTGVFSPLAQAQPNIIVYTTKMYPIQNSQLAS
                     QIYYLDQVENFEESISRNLSKSPEIAEQEMRAFFNSADWKAQEQQLKDAYQGVISGWQ
                     NGIKKVPAVFFDNPQSSPSVIYGTTDVQKALDEWHKWVKQQGESK"
     gene            6407..7348
                     /locus_tag="PXB09_001767"
     CDS             6407..7348
                     /locus_tag="PXB09_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL5233862.1"
                     /translation="MKKTFLTILISASLAVPTTLYPQPARASLNTASIAASSASTSCL
                     EYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTELQALNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGNTGYYCKTQTTPFMPYFLSGLDFFA
                     WRENMPEMFYPEALTPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     SRTAQPHIYFPAAKTGGAGEWPPGPVEEGQARTHKWQILYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            7366..9378
                     /locus_tag="PXB09_001768"
     CDS             7366..9378
                     /locus_tag="PXB09_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5233863.1"
                     /translation="MKSHFNFKKSHLRITTALLSSVSGLSYADSITDKLEFSKSDSII
                     SDRVFYQIGGGMGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMVLQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSSQPDAKQAQKDLEDKKGKDGRVWIGGQKKGGENQ
                     EAINVVGDVVKAGFNLLNKRNALDTSTISGSSCDGNLCQTWDNPQTAADFLTKIIGEQ
                     SISTCKEDCGTKTSSKAGVGLSPEIEEEHVRTIVKLENVLNMDVPKAELLADLSSTTV
                     PVTRGLIESLRDDPDVEVLSQRLSAEIATSKIMEKMLLARRAVLAGMREPNVAQNADA
                     QVELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLD
                     KRVQGLENGNVALTDLEAGSNINLSRRNIALSIPNIPNVAALIPNLPNRGGSGVGGNF
                     PSLAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTIVKVTKDT
                     VITKEDAERDLARRTAIFANNVRKELGDSNWNALPPNAQAVLVSYAYNYGSLAKTKSV
                     LDAARRSAQSGDMNALATAIRNRQVDNNGINARRRNQEADYILGKN"
     gene            9399..9827
                     /locus_tag="PXB09_001769"
     CDS             9399..9827
                     /locus_tag="PXB09_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233864.1"
                     /translation="MRKLLGITVLTLCTTSAFATDKNVVFSCTSTEGKPLTVKRVGND
                     YEYSYDKTIFKNPIKKAVTNDGSIIARGSGFTTYALELKNDGLKYVVGFVQPNGNSKE
                     FIEPGATISRDNDQPSIGSVDCDPYKKIYYKFDVHLMNTL"
     gene            10043..10513
                     /locus_tag="PXB09_001770"
     CDS             10043..10513
                     /locus_tag="PXB09_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233865.1"
                     /translation="MDITTQNIELRYLSEQFYLDVAPHLKEILLKETRPYCVLLVRVK
                     NLDFALPLRSNLPEREGVGIKTIPNPQEYGKFKGIDFSKAILLTDKSYLKTDTVQLKN
                     KSELLNIQGNERRIVREFKKYVSEYITAHKNGYKLDHKFEYTTLINYHTELKIS"
     gene            10534..10875
                     /locus_tag="PXB09_001771"
     CDS             10534..10875
                     /locus_tag="PXB09_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233866.1"
                     /translation="MKFIDFGKQLANPVKFIKQNTAFLPKPIQQVVVFAVIFAGLPLF
                     ILGFFILRIWAYKHISLYSEYKDMANSEISSKDTDLKSLFSDDEEQEDDEYQYGYDGP
                     GIYLGNYRVDE"
     gene            complement(10921..>12042)
                     /locus_tag="PXB09_001772"
     CDS             complement(10921..>12042)
                     /locus_tag="PXB09_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5233867.1"
                     /translation="QMNSELGDQQARVPIWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQNSQLSLSPAQVRETSWLGGRILIA
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANNGLKDRLLDDVK
                     QNFSAKVIDFFSSKENSDESILRTVLRAENMDISRGKVYPGYGGNLDRSFTNEVTKTA
                     SMFGLSLGSIGAFPAFDSMRQALPMVHSFALMALIILTPLIMVMSGYSLKTLVTLTFV
                     NFALVTLTFWWELARWLDSWLLSVLYDSGTHSRINPYFLENTQDDIIVNFVMGSMFLV
                     LPAIWLGSMSWVGVKMGEFASHLTTGSRDSKTAGSKIGK"
BASE COUNT         3820 a         2349 c         2285 g         3588 t
ORIGIN      
        1 ctattatttg ttagtaaaat attagctcat tatcatcaat ttcatctaaa attgagattt
       61 gagataaatc ttccactatc actgattttt ctatattgtt accacagcct ttctcagtag
      121 tgctatttac aagtggtgca atttgttgct ccagtttatg agaccaattt cccatcaaat
      181 gagccagcgt atacatttga atttttgttt cattcaatag cgtatcacca actacaatac
      241 aagcaggaat atgtaataac gatagctgga tataacacat catggcagct gtaaaatcaa
      301 catcttgaca atgaacccaa agttgttgtt ggggattgta tttcgcatca aacatcgcat
      361 taacacaacc aatcaccatt acacccgaac cacaagttgg ttctgataaa gtaacaaatc
      421 cctgttgtga gatgattcta tcacagtcct gtagtgtaac tttcgccatt agatctgcga
      481 tgtgagatgg tgtaaagtat tgccctctat aaccatcacc aagattgaga ttcataaata
      541 ctgagcctaa gaaatcatag cgtttttgtg ttaaagcatt caccgtaaca gctaacaatt
      601 ctgctaattg agtaaactca gaatctgaat atcgtgcctt agcatgagca aagcgttctc
      661 gcaaattagg ttctgcttga tctcgatacg ttactaggta catatcaagt gcagagagtg
      721 taataaaatc ataaaacact tctgaacgtc gataatgtgg tacgatacgt tgaaataagc
      781 tgataaattg cttttcaaag ttttccatta gactactcct taaagtttac ggagtaatcc
      841 ccctagggaa ttacccctag ggtggaaaaa ttaattaagg ctattcaagt ttctcttcga
      901 actcatcttc aaattcttca ttaaagactt cctcagcaaa actgcgaata cccctatcat
      961 ctatgtaaat attgcagtat gagccatcaa gatttgcgat atatttgccc gcaaaccaca
     1021 ttcccggctc aaaaaatgaa agtataaact caatgtcagg aaaggcagta caaagtgctt
     1081 ggaaccaacc atcaggtggt ccccatggcg tatcaaatag gcaattaata gatccattat
     1141 cattaaagct aacttgacag ctatctgaac atacattcca tttacagccc cactgttcat
     1201 ttgaccagtc ataccaatct ttgtaaccat gttgagctag gttagacaga tattgctggc
     1261 ctaatgcgag gtttagccat aatatacttt gttgttcagg acgttttatc aaccagttga
     1321 taaaatgacc tacatcccag cgatgatgct ttgccttagc atatatccga tcaatttcgg
     1381 acccatagat atactttttg agtagagggc gtgttaaacg tctatttggt gaaattttta
     1441 gaaattccat tgctctatca ccaagactac ttgattcaat gcagattgat tctggcattg
     1501 gaacgagtaa ttcaaagtct aaacaccatt tatcactttc agtttttctg aaaagcttag
     1561 gaataatttg tttagcttgg atacaatcgc aaaaaatttg tagtttattt tcacaccagt
     1621 ttggcataat gtactcctaa ataaagtagg ggtacacttg ccttgaggca atgtacccca
     1681 agggttaaaa gataatcgat acataattcc taaaggatta tgtattacta tgaaagattg
     1741 tgttgaaagt acctttcagc aaagagttaa gctgcttctt caaagacctc gtttttatca
     1801 gccagctgtg agatatttaa tgcatctaac atatattgac aagcttcacg agctttacca
     1861 gaagcccgga caatagcccg tttatcttct tttataactc ttatccaact ttcaatatat
     1921 gccgcatttt gaggtaccgt atcaaatcca aggtaggcac acaaaaatgc tccccccatt
     1981 tcggcaacca actcctcaaa agcatagact ttgtttccaa attttgcttt tccggaggta
     2041 ataccctcac gatcgagcct tttagcagca ccagttgcat gagtcatttc gtgcaataac
     2101 acactatgaa acgcttgagc attttcaaac tgttttattt ccggcattac aactaaatct
     2161 gcactgggtt gataatatgc ccgattactc ggtttcattt ccacgtgtaa atccattcct
     2221 ttgataatct gccgaatatc agcaaaaatc tcgtattggt ttggatccga tgtaggctgt
     2281 ttaggttctg atataggatc gtacagttcc tcgggtaaat tttcacactg gtctagattg
     2341 aacagattgt gcttcttaat gaaaaagtgt tgttcaattt ctggattacc ttcctcgtca
     2401 tacacaatat ttccctcctc atcaagtttt tctctcttat caggacggta gttcattaca
     2461 acagtagctt tttcaccttt acggatatat ccgccgagct cgttagcttt ttttgctgta
     2521 atccacttac tctgtttgta accgtattct gcggtagcaa tccagagtaa tagtgtgttg
     2581 ataccagaat acaatcggtt agagaccgca ttacgaggta atgccatatt acattctgga
     2641 tgactccacg gttttaacca tggtgcagtc ccctgttcca gtgctgcaac aattcggtct
     2701 gtgatatgtt ggtataaatc aaatttagtt tgagtgttca ttagtgtttc tccaaagttc
     2761 aggtagaaaa tggggaaaca ctattaccct tatcgggcac tagtttcccc gatgggtggt
     2821 ttaaaatctc aacagagata gtttttctag gttcatcaaa accagtagaa ctgcctataa
     2881 tgcagtaact acagataatt tgttaatcag tattgattca agttaaacat aatcctcata
     2941 tcgaaaatta ctttggtaat acaaagttac attatttcag atccattaaa gtaaacgttg
     3001 aaagctatta gcagcaataa agtgataact tttttccgca gcttctgttt ccgtaatcat
     3061 tccctgctcc agcaaaacat gggtgattcc attgaaaaac tgatgtaata gaaatgaaat
     3121 aaaacctgtt gtttcaactt ttactgggcg acaatgaaac tgcatatcct gccaaagttt
     3181 aatatcatct tttaactgtt gagagctcac aatttcatat acaacagcag aaatattaac
     3241 taaattaccg ttgttattca gccaaattgt ataacgattc caatctcctt ttctcattgg
     3301 ctctatacaa atgtgaaata ggtattggta ggctttatta tttaaattgc ggttatccca
     3361 gatgtatttg agtaaatcta aatcgtgttt cataatgttt ctccaaaaga aaaaagtgga
     3421 gaaacatctt acctataggg aaaatatttc cccacagggt aaaaaacaat ctcgataagc
     3481 ggtcaaattg aaataaaaaa cctacaaatc aggcatgcaa gtaggcaaaa cgtgcggcat
     3541 tactacgagc agaagctata gcattactaa taagctcttg tcgataacca ctcaatgaat
     3601 ggtctgtcgg cgaatagctt acgcctgtaa tttcatcgct acctagttga atgccacttt
     3661 ccttatcagt aacggttgct acaaaatcag catagcaaag tttcccttgt aggatttcct
     3721 ctatcattgc ctcaaaatcg cagacatcac cacatagcca atcaacagac tctgaataaa
     3781 attcagagga tttacgttta agttctatca gatagttttc cgtgttaaat ttgaaaatag
     3841 tttccgtctg atacggtgag gcctcaataa tctgatagcc attcgattct aaggcacagg
     3901 aagtatcttt aatatactga cctaaatctt gaataaatcc atcccacagg gctttgtatt
     3961 tttccacttt tgatgtaggg aaataccact cttttcgggc atcacgatca tagaaaaatg
     4021 ccaaatcatc tgctgttcta acagaaagct ccatcgtatt acaatgcgaa tagcggtacc
     4081 caaaactatt tcgtatgatt tcaaaatcca cgccatagtg aggctcccaa gattcaatgt
     4141 gattcagcag attagaaaac attttttgtg tgcgtttctg aggatttagc ttgttgaaaa
     4201 gattaattaa cgtctccgta ttaagcctac cgtagaatgc tacgccatcg ccttgacaat
     4261 gagaaagtga atactcaatg tttaagcaat taggaaaacc agctttaaca agagcgtgtt
     4321 taaaataagt gtttaagact gagccagaca ttgcgcttct cctaaaatta gagggaaaca
     4381 cattaccctt ttccggaaat tgtgtttccc gaaagggtga aagattgatt accacttatc
     4441 gaagttaatc gctctgaatt tataaacgga tataggttga tcatagagtt ctgtttccga
     4501 aatccaattg tgttcaacca agatttctct gacaagatac ataaatgtac tcatcaaatg
     4561 acgactatga ctaaacccgt ttccaccaac ataagcaaac cctctcaggg ttttgcgaat
     4621 tcctgcttta acaacaaggt aagtaatatc aacctcgcca taagacgggc agacatcaaa
     4681 gcgagaaaaa acagaaaatg ctttgccaaa cttggtctca cgctctaatt tcacactgaa
     4741 tagatcatgt gcatggcgta aattccaaag tacactgtat aagtgcaaat ctgtttcggt
     4801 atattgaatt tttttacgag ccataatgtt tctcctaaaa aataaaaggg aaacattact
     4861 tccctctggg gataatgcct ccccttgtga ggtataagaa taggatgtga atatgaagtt
     4921 gcctatgctc gactaacaat tagcttgccg ttctgctcgg acacactcag aaagcgaaaa
     4981 ttaagtcctt gccgagacgg catttgttgc ataaatcgca cgcttttgat gtccttatct
     5041 cgattttgcc acgcttctaa agctctatga ctaatttctt gctgtaaggc ttgatgctct
     5101 gatgtccatt cattaagttt agttggtaaa acatctccaa tacaggaaag tctaatatga
     5161 actaacatac atttctccag aataagggga aatgcattcc ccttaaggga aacaacattt
     5221 ccccgatggg tgagttaaat tagattaaag agagctgagt accaaaaacg gcagccatac
     5281 cacatacaaa ggcaataatg gcagccaaca aagtccagaa aaacatctta cgcttaatgc
     5341 gggaaatttc ctgttcatat tcggctgctt gttcgtctaa gcacatttgc agttctaagg
     5401 ctcgcatttc atcttcttca gcaatccgtt gattgatgcc tttggtgact tcaacatact
     5461 tgcttttggc tttatgtttc gctgaaacaa aaatattacc tagcttgttg ccaagtttcc
     5521 aaaaaagaga aggttttacg gttttggatg attcaaacgg gataacatcc catcctgcgg
     5581 tttgttgact catagcgagt tctcctaaaa gttaagtgaa taaaattcct caggagatcg
     5641 caattccaag ggaattgaaa tatccctcgg aaggtaggtg tgtaggtagc attcctgcaa
     5701 atttgcagag ttccctttca gaatgctggg agacattttg ggtaaataac tcaactacct
     5761 ctaaggatag ccgccgcttt tcaagagtta tgcgactttt aagggctgta tctacagcgt
     5821 cttaatgctt aatatcatac gaattcctcc aataaaatca accgtttttt tgttcaaaaa
     5881 atatctcttt tttgaaaaga gtttttccta tcctcaacat aaaaatctcg ctaattttct
     5941 gcttatttgt tcgggaggag agcgtgatga aagtaagtag atttctggga tattgcagta
     6001 tagtaacagg tgtgttttcg ccccttgcac aagcacaacc caatatcatc gtctatacca
     6061 caaagatgta ccctattcaa aattcacaac ttgcttccca gatttattat cttgaccaag
     6121 tagagaattt tgaagagtca atcagtcgaa acctcagtaa atcaccagag attgccgaac
     6181 aagaaatgcg tgcattcttt aattcagcag attggaaagc ccaagagcaa caattaaaag
     6241 acgcttatca aggcgtgatc agtggatggc aaaatggcat taagaaagta cctgcggtgt
     6301 tttttgataa tccacaatct tctccgagtg tgatttatgg tacgactgac gtacagaaag
     6361 cattagatga atggcataaa tgggttaaac aacaaggtga atcaaaatga aaaaaacgtt
     6421 tcttacgata ctgatctctg ccagtttagc tgtcccaaca accttatatc ctcaaccagc
     6481 cagagcctca ttgaataccg cttccattgc tgcatcaagt gcctcaacaa gctgtttgga
     6541 atataaagtt gttggaacct gtttttggtt attttgtacc tactttggat gtaaggttcg
     6601 cacatcaacc aaaattaagc attatttacc tgaaatggtt gtttcatctt ataaccacga
     6661 tgggcaaacg ccatggacag aattacaagc tctcaatcct ggtgtaaaag gtggagaata
     6721 ccgttctcca caacgccaat actctcaact cactttcaaa aatgcggatg cgtttggaca
     6781 cccacaagga gctatcggtc aattattagg aaatacgggg tactattgta aaactcaaac
     6841 tacgccattt atgccttact ttttgagtgg gctggatttt tttgcctggc gtgaaaatat
     6901 gccggaaatg ttttacccgg aagctctgac tccgggaatg cgggaagttg gccgtgtagg
     6961 cgatagctgg ggaaatattt acccacgttc cggttgggta acccaagcac acgattataa
     7021 agcctctgcg accattgtgc agagagtggc agacattgtg agccgaacag ctcagccaca
     7081 catttatttc ccagcagcca aaacaggtgg tgcaggagaa tggcctccag gaccggtcga
     7141 agagggacaa gcaagaacac ataaatggca aatactttac cctcaaatgt caaatacctg
     7201 ctctgttttt cctaatggag ggcaaacaga tacctattct tctcaaattt caaatcaagg
     7261 tgattatgct tgggcattat ggcgacctta tagttgttgc aaacgccgtg ggcaaacatt
     7321 cctttacagt attgattggt cacactaata acattgggag caataatgaa atctcacttt
     7381 aacttcaaaa aatcccactt acggatcacg acagcattat tatcaagtgt atcaggacta
     7441 tcttatgccg attcgattac ggataaactg gaatttagta agtcggattc gattatttca
     7501 gaccgtgttt tttaccaaat cggcggtgga atgggttata tggctccacc tagtcgtggt
     7561 aataccaaag ttgttgattt aggaattggt tggaaagcga atttaacctg tggtaatttt
     7621 gatattaaaa cgaccattaa aaatgattta aacggtctca aagacggctt taaagattta
     7681 atggggaatg tcattgattc agcgaaaggt gcggttgcaa gtatgcctgc aatggtattg
     7741 caacgggcca accctcaact ctacgattta ctcacaaatg gtatgtacca aggtaagctg
     7801 gatttcaacc gtcttaaaac cagttgtgaa gaaatgtcca aagttttagc agatcataca
     7861 ctgggaggaa aatgggggca agcagctgat ttagaaagct ataagcaaat tacctcctct
     7921 caacctgatg caaaacaagc tcaaaaagac ctggaagata aaaaagggaa agatgggcga
     7981 gtttggatag gaggtcagaa aaaaggtggg gaaaaccaag aagctatcaa tgttgttggc
     8041 gatgttgtca aagctgggtt taatttactg aacaaacgta atgccttaga taccagtaca
     8101 atttcaggtt caagctgtga tgggaatctt tgccaaactt gggataatcc acaaacagca
     8161 gccgattttt taactaagat tattggtgaa caatctattt cgacttgtaa agaggattgt
     8221 ggcactaaaa ccagctcaaa agccggtgta ggcttgagtc cggaaattga ggaagaacat
     8281 gttcgtacta ttgtcaaatt agagaatgta ctgaatatgg atgtgcctaa ggctgaattg
     8341 ttagctgatt tgagttcaac tactgtacca gtaacaagag ggcttattga gagtcttcga
     8401 gatgatcctg atgttgaggt attaagccaa cgcttatctg cagaaattgc gactagtaag
     8461 ataatggaaa aaatgctcct ggctcggcga gcagtcttag ctggtatgcg tgagccaaat
     8521 gtcgctcaaa atgcggatgc acaagtagaa ctggaaagag tactcaatat tattgaccgt
     8581 gaaatttccc aagtaaaact agaaatggat atgcaaaaaa tgatcaccgg caatacggct
     8641 tcggtgattt tgcaaagcaa atccgaacga gaagctcttg ctggtgctca tagtttatct
     8701 caagacagtc tggataaacg tgttcaagga cttgaaaacg gtaatgttgc attaactgat
     8761 ttagaggcag gctctaatat taacctctct cgtagaaata ttgcattgag tatcccgaat
     8821 attccgaatg tagctgctct catacctaat ctgccaaatc gaggtggttc aggtgtaggt
     8881 ggaaatttcc catcactcgc acaaatcagc ggttcaacga tggatcaagc aacaggatta
     8941 ctacgtaatt ttgaaggctt tatctctaag gctcaatggg atgtaaatgc tcatcgagta
     9001 ggatatggtt ccgatacaat tacccgagct gatggtacga tcgtaaaagt aaccaaagat
     9061 acggtcatta ccaaagaaga tgcagagcgt gatttggccc gccgaacagc tatcttcgca
     9121 aataatgtga gaaaagagct tggagattca aattggaatg cgttaccgcc gaacgctcaa
     9181 gctgttttag tgtcttatgc atataattat ggttcacttg ctaaaacaaa aagcgtactt
     9241 gatgcagcca gaagatcagc tcaaagtggt gatatgaatg ctttagctac tgcaatcaga
     9301 aatcgccaag ttgataataa tggcatcaat gcacgtcgcc ggaatcagga agctgactat
     9361 attcttggta aaaattaacc tcataaggag ttacatttat gcgtaaatta ttaggtatta
     9421 ctgtacttac actttgtaca acttcagcat ttgcaacgga taaaaatgtg gtattttctt
     9481 gtaccagcac agaaggtaaa cctctcacag ttaaacgggt aggaaatgat tacgagtatt
     9541 cgtatgataa aactatcttc aaaaacccaa tcaaaaaagc ggtgaccaac gatggctcaa
     9601 ttatcgctag aggatcaggt tttaccacgt atgcattaga actgaaaaat gatggtttga
     9661 agtatgtagt tgggtttgtt caaccaaatg gtaactcaaa agagtttatt gagcctggag
     9721 caacgattag ccgtgataat gatcaaccaa gcattggctc tgtagattgt gatccttaca
     9781 aaaaaatcta ttataagttt gatgttcatt taatgaatac cttgtaatgc gataattcaa
     9841 taatatgggg gaatggcttg atttttcatc ccccatactc tattatatag atgtggtgct
     9901 agagccagcc cacgttaaaa aatacaaagc tcggtagatg aactattgtg gtgccagagc
     9961 cggcccacgt taaaaaatac aaagctcggt agatgaggcc ccttaagtcg taagatttaa
    10021 ggggttttgc ttaggatata aaatggatat tacaacacaa aatattgaac ttagatactt
    10081 atctgagcag ttttaccttg atgtcgctcc acatctgaaa gaaattttgc ttaaagagac
    10141 tcgcccatac tgtgttctat tagttagagt taaaaattta gattttgccc taccattgcg
    10201 ttctaattta cctgaaagag aaggagttgg aattaaaacg atacctaatc ctcaggaata
    10261 cggcaaattt aaaggaattg atttctcaaa agccattcta ctgacagata aaagctattt
    10321 aaaaacagat accgttcagc tcaaaaacaa atcagaattg ttgaatatcc aaggtaatga
    10381 gcgtagaatt gttcgtgaat ttaagaaata tgtgagtgaa tatatcactg cacataaaaa
    10441 cggttataaa ttagatcata aatttgaata tacaacttta attaattatc atactgagct
    10501 gaaaatcagc taattagaat aattggagga gctatgaaat ttatcgattt cggaaagcag
    10561 ctcgctaacc cagttaaatt tatcaaacag aatactgcat ttttacctaa gcctattcaa
    10621 caagtggtcg tttttgcggt aatttttgca ggattgcctc tatttatctt gggtttcttt
    10681 attctcagaa tatgggctta taagcatatt tctttgtata gtgaatataa agatatggct
    10741 aattcagaaa tatcgtctaa agatacagat ttaaaatcac ttttttctga tgatgaagaa
    10801 caagaagatg atgaatatca atatgggtat gatggaccag gtatatatct aggtaattac
    10861 cgtgttgatg agtaaaagta aatagagtgg tatataccac tctattattc agttgttaga
    10921 ttatttccct atcttggaac ccgctgtttt agagtctcta gaaccagtag ttaaatgact
    10981 tgcaaactct cccattttta ctcctaccca agacatactg cctagccaaa tcgctggtaa
    11041 gaccaagaac atagaaccca tcacaaaatt cacaataata tcgtcttgtg tattttcaag
    11101 gaaataaggg tttattctgc tatgtgtgcc tgaatcatag aggaccgaca gcaaccaaga
    11161 gtcaagccat ctagctagtt cccaccaaaa tgtgagtgta actaatgcga aattcacaaa
    11221 agttagcgta accaatgttt ttaacgaata accactcata accataatta aaggcgtgag
    11281 aataatcaat gccattaatg caaatgaatg caccatcggt aatgcttgcc gcatcgaatc
    11341 aaaagcaggg aatgctccga tactgcctaa tgacagacca aacattgaag ctgttttagt
    11401 cacttcattt gtaaatgatc tgtctaaatt tcccccatac ccgggataaa ctttccctct
    11461 cgaaatatcc atattctcag ctcgtaatac ggtacgaagt atggattcat cggaattttc
    11521 tttactgctg aaaaaatcaa tcacttttgc agagaagttc tgttttacat catctaataa
    11581 acgatctttt aaaccattat tcgccgtatc ccaccactct gcacaatttg gaaaaccacc
    11641 ctctccatta ttcggcaatc cattatcccg agaagcatta tagggaaata gactatgagg
    11701 ttgttgggct cgataacggg gataaagctc gctatttgca atcaaaatac ggccacctaa
    11761 ccagctagtc tcacgaacct gtgctgggct caatgaaagt tggctatttt gaattttctg
    11821 acgtgccggt acatagcatt gttgtacaaa taagcgaacc tctgtcaata atgctggatt
    11881 attgattttc tcgtgttgaa cttcaaaacg aacttgacgt aaatccggtt tgcagggaat
    11941 tgaagctgtt aaggcgtgtg ttaccccttt gttgatttga tgaaataatc cccaccagat
    12001 agggactctc gcttgttgat cacccaattc agagttcatt tg
//
LOCUS       DANLTI010000081        12015 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.081, whole genome shotgun sequence.
ACCESSION   DANLTI010000081 DANLTI010000000
VERSION     DANLTI010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12015
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.081"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(97..172)
                     /locus_tag="PXB09_001773"
     tRNA            complement(97..172)
                     /locus_tag="PXB09_001773"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(137..139),aa:His,seq:gtg)
     gene            complement(202..278)
                     /locus_tag="PXB09_001774"
     tRNA            complement(202..278)
                     /locus_tag="PXB09_001774"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(242..244),aa:Arg,seq:ccg)
     gene            complement(437..1159)
                     /gene="rffM"
                     /locus_tag="PXB09_001775"
     CDS             complement(437..1159)
                     /gene="rffM"
                     /locus_tag="PXB09_001775"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDL5233868.1"
                     /translation="MFDKVIIRGIALQAVKNREIFANWLMNEKRIQFGRLVAINAEKV
                     ILSEKNPLLRRVIDEAEFNYADGISVVQSIRKKYPNYKIERIAGADLWETLMQRAGAL
                     NVPVFLVGSSADTLTKVEAKLAQWKVNIVGRQNGYFKAEQEQDVIEQIKASGAKFISV
                     AMGTPKQELFIQQLQQQYPQALYMGVGGTYDVFAGKVKRAPKIWQNLGLEWLYRLLKQ
                     PTRWQRQLNLLKYAYYYLTNQL"
     gene            complement(1149..2420)
                     /locus_tag="PXB09_001776"
     CDS             complement(1149..2420)
                     /locus_tag="PXB09_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WzyE family oligosaccharide polymerase"
                     /protein_id="HDL5233869.1"
                     /translation="MNNLIPLGGFYLVSVGLFFSLLYQLYQKSGISFHLLFSLLYFVT
                     FYAGFPFSLIMAFGFDYPLPELKTQWQVFTAAGVGYLIYYVVYSRLWSAVSQPTALVA
                     NFQAKTTACILAAVAVVALLYFLYLNGFLLFKLEKYSQLFAKDRVILSALKRFFYFLL
                     PALLIFCFLYKNKTAWWALLIVGGAFGILSYVAVGGTWANLALAVGFFLLIGLQQGYL
                     SLSKVIAVSLIGVVAMFFLALARYKLTLSGSEMIYTFLYLSRDTFSPWENLARVFSNE
                     VEYQGLMPIVRDFYVYIPQSLWQERPEIVWNTANYFTKVILGNQSGLAISPTLLGSFY
                     IMGGFSVMALGMGIVAAMIKALDNLFAYAKACNSALLQAYCFGNLFNLIVLVREGIDA
                     FVSRFCFFTLIFMACYLLAKILSMGKNNNVR"
     gene            complement(2413..3483)
                     /locus_tag="PXB09_001777"
     CDS             complement(2413..3483)
                     /locus_tag="PXB09_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDL5233870.1"
                     /translation="MLPIYHILGSEIEHHNQQVLTFFQQELLPLLPDSEHFFYVVGKP
                     SLQTAFPHLRIKQFSSQKAIANALIAKKRQNPTACFLLHGQFNPWIWLAIALGRLPTT
                     NLIWHIWGADLYEMATSWKFKLFYPFRRVAQQKILQVWATRGDLDHLWRNMRTRSEQD
                     HLIYFPTKLGDQIKISPTQNDRLTILLGNSGDPANELIQALSEIHQRLGNNVRIIIPM
                     GYPENNESYIRQVEAYSKRLFLAENLQILRKKLSFEEYVTLLSHCDLGYFNFKRQQGI
                     GTISLLISHNVPCVLHSANPFGLDLQAEKVPYLLAENLTASQIQTTKQQLKSIDKNRI
                     AFFAPGYTKLWQQRLIELMQNE"
     gene            3670..5091
                     /gene="glnA"
                     /locus_tag="PXB09_001778"
     CDS             3670..5091
                     /gene="glnA"
                     /locus_tag="PXB09_001778"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDL5233871.1"
                     /translation="MSNAIANVSKLIQDNDIKFVLLKFTDIKGKEHGVSLPVSLVAND
                     LEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVVDPFARIPTLSIRCSIYDPNT
                     MQSYDRDPRSIATRAENYLKSTGIADSVMFGPEPEFFLFDDVRFSTEMNNVSYRIDDV
                     EAAWNTNRKFEEGNKAYRPLKKGGYCAVAPIDTAHDIRSEMCLLMEEMGLVIEAHHHE
                     VATAGQNEIATRFNSLTLKADETQIYKYIVQNVAVEHGKTACFMPKPFAGDNGSGMHC
                     NMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPTTNSYKRLVPGFEA
                     PVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPMANPYLCFAALLMAGLDGVINKI
                     HPGDAMDKNLYDLPPEELKDIPTVASSLESALDALSNDFEFLTQGGVFTKDFIDAYIG
                     IRRKEVERVNMTPHPVEFELYYS"
     gene            complement(5135..6278)
                     /gene="rffA"
                     /locus_tag="PXB09_001779"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /pseudo
     CDS             complement(5135..6278)
                     /gene="rffA"
                     /locus_tag="PXB09_001779"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
     gene            complement(6265..6909)
                     /gene="rffC"
                     /locus_tag="PXB09_001780"
                     /gene_synonym="wecD"
     CDS             complement(6265..6909)
                     /gene="rffC"
                     /locus_tag="PXB09_001780"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDL5233872.1"
                     /translation="MKPDQWLSDFFGREIVQVKVAADDFRQIARLQKQGFVLVEGELE
                     FELALATFSENMTACRPADMADLPDLNLLFGSAFPDSRFRSPYFSREENQRFYRTWIE
                     NAVKGKFDDIGLVQCNADGQIQGAVTVRLLAQQQAKIGLLAVKPDCRQQGIGSELLNA
                     AIAWAKQQNAKKLMITTQLSNQKAIRFYQAFGASIKAVYYWFYPALEKYDDEQS"
     gene            complement(6906..8153)
                     /gene="wecC"
                     /locus_tag="PXB09_001781"
     CDS             complement(6906..8153)
                     /gene="wecC"
                     /locus_tag="PXB09_001781"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5233873.1"
                     /translation="MMSKTEFNTICILGLGYIGLPTSVVFANAGKQVIGVDINPQVVA
                     SLNQGNIHIIEPDLQTAFTQAVKKGNFFATAKPQPADAFIIAVPTPLCGKQPDLTYIQ
                     NAAAMIAPCLRKGNLVVLESTSPVGTTENLAEWLSQARPDLAFPADVSIAYCPERVLP
                     GNIMTELVENDRIIGGLSEQCSQQAVDLYQIFAKGRCVTTTARTAEMCKLVENSFRDV
                     NIAFANEISMICDALKINVWELIELANLHPRVNILQPGAGVGGHCLAVDPWFIVSTSP
                     QQARLIRTAREVNDSKPQWVIEQVKTSVADCAMEQDCKPSELTIACLGLAFKPNIDDL
                     RESPALAITRQLAAWHQGSLLAVEPNIQQLAGEKITLVDLNTALSQADILVLLVDHTS
                     FKQISREQIRQRHIIDCRGVWVR"
     gene            complement(8194..9006)
                     /locus_tag="PXB09_001782"
                     /pseudo
     CDS             complement(8194..9006)
                     /locus_tag="PXB09_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248465.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPS chain length-determining protein"
     gene            complement(9017..10081)
                     /gene="wecA"
                     /locus_tag="PXB09_001783"
     CDS             complement(9017..10081)
                     /gene="wecA"
                     /locus_tag="PXB09_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDL5233874.1"
                     /translation="MWLTFLTVFIVSFLALIVMRPVAEFVGLVDKPNFRKRHQGLIPL
                     IGGIALFIGNLTFYFMQWQDMRLPELYLTAVTILLIIGVLDDRFDISPLLRAGIQAAL
                     AGAMIYSGLSLSSLGQIIAPFSIELGWLGIVFTVFITIGVINAFNMVDGIDGLLAGLS
                     SVSFAGLGTLMFINGEPSLGYWCFALIFVLLPYAMFNLSLFGAKWKVFMGDSGSMLIG
                     FTIIWILLLSTQGQGSPISPITGLWLIAVPLIDMVAVIIRRLKKGKSPFKPDRLHLHH
                     LMMRAGLTSRQALLVITLWAGFCSTIGVLGEVYYWNQWVMMLMFIGLFFLYAYSITHA
                     WRVTRFVRRLKRRAKRSKQL"
     gene            10223..11503
                     /gene="hemL"
                     /locus_tag="PXB09_001784"
     CDS             10223..11503
                     /gene="hemL"
                     /locus_tag="PXB09_001784"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDL5233875.1"
                     /translation="MSISEQLFEQAQKVIPGGVNSPVRAFKGVGGTPVFIEKAEGAYI
                     TDSDGKQYIDYVGSWGPMVLGHNHPAIIDAVLKAVPKGLSFGAPTAAEITLAELVCKL
                     VPSIEMVRMVSSGTEATMSAIRLARGYTNRDKIIKFEGCYHGHSDSLLVKAGSGALTL
                     GQPSGPGVPADFAKHTLTCTYNDLDSVKAAFEQYPNEIACLIVEPVAGNMNCIPPQEG
                     FLQGLRDLCTQYGAVFIIDEVMTGFRVALGGAQSYYGVTPDLTTLGKIIGGGMPVGAF
                     GGKKEIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKAGNETILAEKTKTLAEG
                     FKALADKHNVPLTVQYVGGMFGLFFTEQKAVNNFQEVMKCDAAKFNRFFHLMLEQGVY
                     LAPSAFEAGFMSLAHSDEDIARTLEAADKAFAQL"
BASE COUNT         3550 a         2792 c         2426 g         3247 t
ORIGIN      
        1 ggcgagatag gatttgaacc tacgacccac tggtcccaaa ccagttgcgc taccaagctg
       61 cgctactcgc cgtctgatac tcacaagagt attgaatggg gtggctaatg ggattcgaac
      121 ccacgacaac tggaatcaca atccagggct ctaccaactg agctatagcc accattgtgt
      181 tgatagtgcc gcattgacat ctggcgcgct cgacaagatt cgaacttgcg acctttggct
      241 ccggaggcca acgctctatc caactgagct acgaacgctt cgatttacat caattcaact
      301 taatgcgtcg caacggaggc gtatattata gatttcactt tcccttgtct agcacttttt
      361 aaaaaaaatg taaaaaaatg tattgtttgg ttttatttta ttcaaaacgt ttaataaata
      421 tcaaaaaatg cgttttttag agctgatttg tcagatagta ataggcatat tttagtaaat
      481 ttaattgtct ttgccagcgg gttggctgtt tcaatagtcg ataaagccat tccagcccca
      541 aattttgcca aattttaggt gctcgtttca ctttaccggc aaacacatcg taagtcccgc
      601 caacacccat atataaggct tgtggatatt gttgttgtaa ctgttggata aaaagttcct
      661 gttttggagt tcccattgcc acactaataa acttcgcgcc acttgcttta atttgctcta
      721 taacgtcctg ttcttgctcc gccttaaaat agccattctg cctaccgaca atattcacct
      781 tccattgtgc caattttgct tccaccttcg ttagggtatc cgccgagctg ccgaccaaaa
      841 acaccggcac atttaacgct ccggctcttt gcattaaggt ttcccataaa tcggctccgg
      901 caattcgctc tattttatag tttggatatt tttttcgaat cgattgaaca acactgatgc
      961 cgtctgcata gttgaactcg gcttcatcta tcactcggcg taacaacgga tttttttccg
     1021 acagaatcac tttctcagca ttaattgcca ctaatcttcc gaactgaatc cgcttttcat
     1081 tcatcagcca atttgcaaaa atttcccgat ttttgaccgc ttgtaacgca atgccccgaa
     1141 tgatcacttt atcgaacatt attatttttc cccattgaaa ggattttcgc cagcaaatag
     1201 caagccataa atatcagcgt gaaaaagcaa aaacgggaaa caaatgcatc gattccctct
     1261 cgcactaata cgatcaaatt gaataaattg ccgaagcagt aggcttgcaa caaggcggaa
     1321 ttgcacgctt tggcgtaagc gaataggtta tctaaggctt taatcatggc agctactatc
     1381 cccattccca acgccataac gctaaatccg cccataatat agaaagagcc gagtaaggta
     1441 ggcgaaatag ctaaccctga ttggttgcct aaaatcactt tggtaaaata attcgccgta
     1501 ttccagacga tctcagggcg ttcttgccat aaagattgtg ggatatatac atagaaatcc
     1561 cgcacaatcg gcattaaacc ttgatattcc acctcattag aaaatacacg agccaaattt
     1621 tcccaaggcg aaaaagtatc tcggcttaaa tataagaagg tgtaaatcat ctcgctaccg
     1681 gaaagggtaa gtttgtaacg ggctagagcg aggaagaaca tcgccaccac gccgattagg
     1741 cttacggcaa tcacctttga taacgacaga tagccttgct gcaatccaat caataagaaa
     1801 aagccaaccg ctagtgctaa atttgcccat gtgccgccca ctgccacata gcttaatatg
     1861 ccgaatgccc caccaacaat cagtaacgcc caccacgctg ttttattctt atataggaag
     1921 caaaaaatta acaacgccgg caataaaaag tagaaaaatc gttttaatgc cgaaagtatg
     1981 accctatctt tggcaaacag ttggctatat ttttcgagtt tgaaaagcag aaaaccgttt
     2041 aaataaagga aatatagcag ggcaacaact gccacagcgg caaggataca agcggtcgtt
     2101 tttgcctgaa aatttgcaac aagagcagtt ggttgcgaca cagcactcca caagcgtgaa
     2161 tagacaacgt aataaatcaa atagccaaca cctgctgccg taaaaacttg ccattgtgtt
     2221 tttagctccg gcagcgggta atcaaagcca aatgccatta ttaacgaaaa cggaaaaccg
     2281 gcgtaaaaag taacaaaata gagcaaacta aacagtaaat ggaaagaaat ccccgatttc
     2341 tgataaagtt gataaagtaa gctgaaaaat agcccgacag aaacaagata aaatccgcca
     2401 agtggtatta aattattcat tttgcattaa ttcgattaat cgctgttgcc atagtttagt
     2461 gtagcccgga gcaaaaaacg caatgcggtt tttatctatg ctctttagtt gttgtttggt
     2521 tgtttgaatc tgtgaagcag tcagattttc cgccaacaaa taaggcactt tttctgcctg
     2581 tagatccaac ccaaacggat tggctgaatg taacacacaa ggtacattat ggctaatcaa
     2641 aaggcttatc gtgccaatgc cttgctggcg tttaaaattg aaatagccga gatcacaatg
     2701 gctcaataac gtaacatact cttcaaagct cagcttcttc cgcaaaattt gcaaattttc
     2761 cgccaaaaat aaccgcttgc tataggcttc cacctgccga atatagcttt cattattttc
     2821 cgggtagccc attggtatga taatccgcac attgttccct agtcgttgat gaatctcgct
     2881 taaggcttga ataagctcat tcgctggatc gcctgaattg ccgagcaata tcgtcaagcg
     2941 atcattttgt gtggggctaa tttttatttg atcacctaat ttcgtgggga aatagattaa
     3001 atgatcctgt tctgatcttg tacgcatatt tcgccacaaa tgatccagat cgcctcttgt
     3061 tgcccaaacc tgtaagattt tttgttgggc aacacgccga aacgggtaaa acagcttaaa
     3121 tttccacgaa gttgccattt catataaatc cgccccccaa atatgccaaa tcaggttggt
     3181 ggtcggcaat ctgcctaagg ctatcgccag ccaaatccaa gggttaaact gcccgtgtaa
     3241 cagaaaacaa gcggtcggat tttgccgttt ttttgcaatt aaggcgttcg caatcgcttt
     3301 ttgtgaagag aactgcttaa tccgcaaatg aggaaaagca gtttgcagtg aaggcttgcc
     3361 taccacataa aaaaaatgtt cggagtctgg caataacggc aaaagctctt gctgaaaaaa
     3421 ggttaaaacc tgttggttat gatgctcaat ctcggagcct agaatatgat aaatcggcaa
     3481 cattacacgc ttttctctcc ccaccataca aacaatatgc aagcggtaag attttagcaa
     3541 aaatttgcaa cattactgca acttctttta gctttgaaac actaaaaaac atcacacact
     3601 tggttaaaaa atgctatgat aaccgagctt ttttattatt catttatccc aacgaggact
     3661 tattttacta tgtcaaacgc aatcgctaat gtatctaaac tgattcaaga caatgatatt
     3721 aaatttgtct tattaaaatt tactgatatt aaaggtaaag aacacggggt ttcgctccct
     3781 gtcagcttag ttgccaacga tttggaagac ttattcgagg aaggcaaaat gttcgacggt
     3841 tcgtccgtag aaggttggaa ggcaattaac aaagcagata tgttgttaat gccgattgct
     3901 gaaaccgctg tagttgaccc tttcgcccgt attcctaccc tttctattcg ttgttccatt
     3961 tacgacccaa acacaatgca gtcttatgac cgtgaccctc gctctattgc aacccgtgcc
     4021 gaaaactact tgaaatccac cggtatcgcc gatagcgtaa tgtttggacc tgagcctgaa
     4081 tttttcttat tcgatgatgt gcgttttagc accgaaatga acaatgtgtc ataccgaatt
     4141 gacgatgtag aagcggcttg gaataccaac cgtaaatttg aagaaggcaa caaagcctat
     4201 cgtccgttga aaaaaggcgg ctactgtgcg gttgcaccga ttgataccgc ccacgatatt
     4261 cgctccgaaa tgtgtttatt gatggaagag atgggtttag tgattgaagc tcaccaccac
     4321 gaagttgcga cagccggaca aaatgagatc gcaacccgat tcaacagcct gaccttaaaa
     4381 gccgatgaaa cccaaatcta taaatacatc gtgcaaaatg ttgccgtaga acacggaaaa
     4441 accgcttgct ttatgccaaa accgttcgcc ggcgacaacg gctcgggaat gcactgtaat
     4501 atgtcattaa gcaaagacgg caaaaatgtg tttatgggcg ataaatacgc cggcttatct
     4561 gaaactgccc tctactatat tggcggtatc attaaacacg caaaagcatt aaatgccttt
     4621 actaacccaa ccacgaactc ttataaacgt ttagtgccgg gttttgaagc accggtgtta
     4681 ttggcatatt ctgcaagtaa ccgctctgcc tctatccgta ttccggctgt gaccagtccg
     4741 aaagcgaccc gtgtagaagc acgcttcccg gatccaatgg caaacccata cctttgcttt
     4801 gccgccctgt taatggctgg cttagacggt gtgatcaaca aaatccaccc gggcgatgca
     4861 atggataaaa acttatacga tttaccgccg gaagagttaa aagatattcc aacggttgcc
     4921 tcgtctttag aatccgctct tgacgcatta agcaatgatt ttgaattctt aacacaaggt
     4981 ggcgtgttca cgaaagactt tattgatgct tatatcggta ttcgtcgcaa agaggtggaa
     5041 cgtgtaaata tgactccgca cccggtagaa tttgaacttt actattcata gtaacaacat
     5101 atagcaaaaa acggctgaaa cactcagccg ttttttattg attgaagaaa gcaagcactg
     5161 cttgaataac acgctcttgc tcctgcttac tcaaattata aaacagtggc aatcttacca
     5221 accgttcgct ttctaaggta gtaaagcgat catcacctgc taatcgacct aatttctgcc
     5281 ctgccggact gctgtgcaac ggcacataat gaaacacggt taagatattc tgtgccttca
     5341 taaaatcaat aaaagcagtt ctctgcttca agtcacttag ctttaagtag aacaaatgcc
     5401 cgttatggcg acaatattcg ccaatgcgag gaagctcgca cttagctgtt tgggcaagtg
     5461 gcaaaaaggc ttgatagtaa ttgtgccaaa gggttaaacg ctgttggttg attttatctg
     5521 cctctataag ctgagcatac aaataagccg cttgaatttc cgacattaaa aaacttgaac
     5581 caatatcctg ccagcgatat ttatctacct caccacgaaa aaattggcta cggttagtgc
     5641 ctttctctct gatgatttcc gctttttcca gcaaatgcct cattaatcac gatcgcccca
     5701 ccttcaccgc cagcggtata gtttttggtt tcgtgaaaac tatagcaacc aatatgcccg
     5761 atggaaccta acgccctacc tttataaaac gaattgactg cctgtgccgc atcttctacc
     5821 acataaagcc cgtatttttc ggctgttgcc attattgaat ccatatcaca agcaatgccg
     5881 gcataatgca ccggcacaat cactttggtt tttggggtaa tggcttgctc aattttgcgt
     5941 tcatcaatat tcattgtatc cggacgaata tccacaaaca caatctttgc cccacgcaac
     6001 gcaaacgcat ttgcagtaga gacaaaagta tagctcggca taatcacttc atcgtccggc
     6061 tgaatatcca gcagtattgc cgccatctct aacgcagccg tgcaagaagg ggtaagcaac
     6121 actttgctac gggccaggtt ttcaagccac tgctcacata agcgggtgaa tttaccaccg
     6181 cccgaaagct gccctgttgc catcgcctgt tctatatagg cttgctccgc ccccacaacc
     6241 gggggttgat taaacggaat aaaatcagga ttgttcatca tcgtattttt ccaaagcagg
     6301 gtaaaaccaa taatacaccg ccttaatgct tgcaccaaac gcttgataaa aacgaatcgc
     6361 tttctggtta ctcagctgag tggtaatcat cagttttttc gcattttgct gtttcgccca
     6421 cgctatcgca gcatttaaca attccgagcc aataccttgt tgtcggcaat caggctttac
     6481 cgccaataat ccgattttcg cttgctgttg ggcaagtaag cgaaccgtta ccgccccttg
     6541 aatttgcccg tcagcattgc attgaaccaa gccaatatca tcaaacttgc cttttaccgc
     6601 attttcaatc caagtccggt aaaagcgttg attctcttcc cttgaaaaat agggcgaacg
     6661 aaaccggcta tcgggaaatg ccgaaccaaa caataagttc aagtcgggca aatctgccat
     6721 atccgccggg cgacaagcgg tcatattttc agaaaatgtt gcaagtgcca gctcaaattc
     6781 caattctccc tccacaagta caaaaccttg tttttgcaac ctagcgattt gcctaaaatc
     6841 atcagccgct acttttactt gcacaatttc tctaccgaaa aaatcggaca gccattgatc
     6901 cggcttcatc ttacccacac tcctcgacaa tcaataatat gccgttgcct gatctgttcc
     6961 cttgaaattt gcttaaatga agtgtgatcc actaacaaga ctaaaatgtc tgcctgcgaa
     7021 agtgcggtgt tgagatcgac taaggtgatt ttttcgccag ccagctgttg aatatttggc
     7081 tcaaccgcca acaggctacc ctgatgccaa gcggcaagtt gccgggtaat cgctaatgcc
     7141 gggctttccc gcaaatcatc aatattcggc ttgaaagcta gccctaaaca agcgatggtt
     7201 agctcacttg gcttacaatc ttgctccatc gcacagtctg cgaccgatgt tttcacttgc
     7261 tcgattaccc attgcggttt gctgtcattc acttctcgtg ccgtgcgaat aaggcgagcc
     7321 tgttggggcg atgtggaaac gataaaccac gggtcaaccg ccaaacaatg tccgcccacc
     7381 cctgctccgg gctggagaat atttactctc gggtgaagat ttgccaattc aattagctcc
     7441 cacacattga tcttcaacgc atcacaaatc attgaaattt cattggcaaa ggcaatgttc
     7501 acatcacgaa agctgttttc caccaacttg cacatctccg ctgtgcgagc tgtggtggtg
     7561 acacaacgtc cttttgcaaa aatttggtat aaatcgaccg cttgttgact gcattgttcg
     7621 cttaatccgc cgataatgcg gtcattttca accaattccg tcattatatt acccggcaaa
     7681 acacgttcag ggcagtaggc aatagacaca tcggctggaa aggctaaatc agggcgagct
     7741 tggcttagcc attcggctaa attttctgtt gtaccgacag gcgaagtgga ctccagcacc
     7801 accaaattcc ctttacgcaa acaaggggca atcatagcgg cggcattttg aatataagtg
     7861 agatcgggct gcttcccgca aagtggggtt ggcacggcga tgataaaagc atcggccggt
     7921 tgcggtttgg cagttgcaaa aaaattacct tttttgaccg cttgtgtgaa ggcagtttgt
     7981 aaatccggct cgataatatg aatgttgcct tgattaaggc ttgccaccac ttgcggatta
     8041 atatccaccc caattacttg cttgccggca ttggcaaaaa cgactgaggt cggcaagccg
     8101 atatagccta accccagaat acaaatagtg ttaaattcag ttttactcat catcagttac
     8161 aaagagaaat ggcacactaa attgtgtgcc attttagatt aaagttccgc aggttgagct
     8221 ttcgctttca ccgcaaaact gagcataaag cccagcagta agccacttaa tgccccaatc
     8281 atcagccaaa ataggcggat caggcgattc tgatttaagt ggaacgctag gcgatttaac
     8341 caagcgataa gctgtaagtt ggttgtctaa cggctgaaca gaacgcatca tttgcagttt
     8401 agctgcccaa tcttgtgagc cttgcttacc gttaatattc aactccgaag cagttttaat
     8461 ttgctggaac aagactttcc atttcgcaat taaatcggcg tttaatttat ctcgagctta
     8521 ggtgtttacc aacggaataa aatcggctaa taatttttga gcctcttccg cattttctgc
     8581 aattaagctg acattatctg ccgaagttgc catatctttt tcaaaacgga attgttcaac
     8641 taattcagcc gccaccaccg ccggtgattt ctttgcaacc tgagctttta atttcaccgc
     8701 ttctgtttgt agcaaatagg cttgaagcaa gtcggcggac gtgaggttgc gtttaaattc
     8761 cgcataaacc tgctcacttg cctgttgctg tgccgtttgg ctattcgctt cttggctatt
     8821 actattcaaa aaatggtagg tggaaagtaa cgagtaataa ttacctaaat cgggaatagt
     8881 cggttgctca aattgagcgg tcactttcca tttttcaggt tgagtataac tcagcccata
     8941 accggcacct gccccgatag cagcaaataa aattagcact aaaagtcgat aaaataaggt
     9001 tttcacaaca tatcctttaa agttgtttgc tacgttttgc acggcgtttt agacggcgaa
     9061 caaaacgggt tacacgccaa gcgtgggtaa tggaataggc gtataggaaa aacagcccga
     9121 taaacattag catcatcacc cactgattcc aataatacac ctcgcctaat accccaatgg
     9181 tggaacaaaa tcccgcccag agggtaatca ccaataatgc ttggcgagag gtaagccctg
     9241 ctcgcatcat taaatggtgt aggtgcaagc ggtctggttt gaacggactt ttaccttttt
     9301 tcaaacggcg gataatcacc gcaaccatat caattaacgg cacggcaatc agccacaaac
     9361 cggtaatcgg gctaattggc gagccttgcc cttgggtgct taacagcaga atccaaataa
     9421 tggtaaagcc gatcagcata ctgcctgagt cgcccataaa cactttccat ttcgccccaa
     9481 acaggctcaa attgaacatt gcatacggca acaacacaaa gataagggca aagcaccaat
     9541 agcccaaact tggttcgcca ttaatgaaca ttaaagtgcc aagaccggca aaactcacgc
     9601 tggaaagccc tgctaataag ccatcaatcc catctaccat attaaacgca ttaataacgc
     9661 caatggtgat aaacacggta aagacaatgc cgagccaacc taattctata ctaaaggggg
     9721 caataatttg ccctaaactg ctgagcgaca agccactgta aatcatcgcc ccagctagtg
     9781 ctgcttgaat cccggcacgc agtaatgggc tgatgtcaaa tcggtcatct aacacgccga
     9841 taatcagcaa aatagttacc gctgtcagat acagttccgg cagccgcata tcttgccact
     9901 gcataaaata gaaagtgaga ttgccgataa ataatgcaat accaccgatt aacggaatca
     9961 acccctgatg gcgtttacgg aagttgggct tatctaccaa accaacaaat tccgccaccg
    10021 gacgcatcac aatcagggct aaaaaagaaa caataaatac ggttaaaaaa gtaagccaca
    10081 tacagggatt gcctcaaaaa atgagtcata aaataggaat gcagaatagc ataaggcaac
    10141 aaaatcgtaa attttttagc gaaaacaagg gcttttcagt acaataacag gcaaattttt
    10201 acatcaaaag aaaggaattg atatgtctat ttcagaacaa ctgtttgaac aagcccaaaa
    10261 agtgattccg ggcggtgtga actcccctgt gcgtgcattt aaaggcgtgg gcggcacacc
    10321 ggtttttatt gaaaaagccg aaggtgctta tattaccgac agcgacggca aacaatatat
    10381 cgactatgtc ggctcttggg ggccaatggt actcgggcat aaccacccgg cgattattga
    10441 tgcggtgcta aaagccgtgc caaaaggctt aagtttcggt gccccaacgg cagcagaaat
    10501 cacacttgcc gaattagtgt gcaaattagt accttctatt gaaatggtga gaatggtgag
    10561 cagcggaaca gaggcaacaa tgtctgccat tcgtttggct cgtggctata ccaaccgaga
    10621 taaaatcatc aaatttgaag gctgctacca cgggcattcc gattctctgt tagtaaaagc
    10681 cggttcaggt gctttaaccc tcggtcagcc aagcggcccg ggcgtacccg ctgatttcgc
    10741 caagcatacg cttacttgca cctataatga tttagattca gtaaaagcag catttgagca
    10801 atacccaaat gagatcgctt gtttaattgt tgagcctgtt gccggcaata tgaactgcat
    10861 tccgccacaa gaaggctttt tacaaggctt acgtgatctt tgcacacaat atggtgcggt
    10921 atttattatt gatgaagtaa tgaccggctt ccgtgtcgca ctcggtgggg ctcaatctta
    10981 ctatggggta acaccggatt taaccacact cggcaaaatt atcggcggcg gaatgccggt
    11041 gggggcattt ggtggtaaaa aagagattat ggaatacatc gctccaactg gcccggttta
    11101 ccaagccggc acgctctcag gcaacccgat tgcaatggct gcaggtttgg catgcttaac
    11161 tgaattatca aaagcaggaa atgaaaccat tttagcggaa aaaaccaaaa ccctcgctga
    11221 aggctttaaa gctcttgcag ataagcacaa tgtgccatta acggtacaat atgtcggcgg
    11281 aatgttcggc ttattcttca ccgaacaaaa agcagtaaac aacttccaag aagtaatgaa
    11341 atgtgatgcc gccaaattca accgtttctt ccacttaatg ctggaacaag gcgtgtattt
    11401 agccccatcg gcattcgagg cagggtttat gtctttagct cacagtgatg aagatattgc
    11461 tcgtacgcta gaggctgcgg ataaggcatt tgctcagctt tagaagaatg acaagcggtt
    11521 gggtttactc aataatttgc aagtttttga gggaatttga ccgcttgtag tgcaaatttc
    11581 tcttacgata gcaattatga tggtgttcgt ctctgacgag tgcttataca aactttcatt
    11641 atgcttaaac aagcacccgt ctggagacgg gcgctatcga gggaatagga ttgataaagc
    11701 aatatatggg cttccaacac ttgcaggcaa ggacaagtct tacactttct aatattacaa
    11761 atatatttct ttctttaatc tataccataa aggtttaagt tggttcttta taactttgga
    11821 atccatagat gaataagctc tctttccata agagataaaa ttagattttc cgaaatgaga
    11881 atacttagaa aatagctttc ttttataaat gcctttgata gctacccctc gtcttattct
    11941 tatcctatta tatttaccct gagtttgctt agctagacta acccctcgtt tcattttatt
    12001 tgaatatcgt gtaaa
//
LOCUS       DANLTI010000082        11947 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.082, whole genome shotgun sequence.
ACCESSION   DANLTI010000082 DANLTI010000000
VERSION     DANLTI010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11947
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.082"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(34..480)
                     /gene="dksA"
                     /locus_tag="PXB09_001785"
     CDS             complement(34..480)
                     /gene="dksA"
                     /locus_tag="PXB09_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDL5233876.1"
                     /translation="MTQAAKTSLGLLALAGVEPYELKKDEEYMNEAQREHFTKILKAW
                     HSQIMEEAERTKSQLQEDMTNFADPNDRASQEEEFSLELRNRDRERKLLKKIEQTLYK
                     IQEDEYGYCETCGVEIGIKRLEARPTADLCIDCKTLAEIREKQLGL"
     gene            complement(730..1683)
                     /gene="thiB"
                     /locus_tag="PXB09_001786"
     CDS             complement(730..1683)
                     /gene="thiB"
                     /locus_tag="PXB09_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDL5233877.1"
                     /translation="MKFILSSLALLSASVYANQPTLTVYTYSSFASEYGPAPKLEQNF
                     EKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADVVVGIDNFLQPEAEKSGLFAEFEAK
                     TKLETQQKIFFPYDTGSYAFIYDKEKLKNPPKSLKELVERQDLKVIYQDPRTSSVGRG
                     FLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHKW
                     HENTDKYVAAPFEEGHLVQVENAAIVKSSQQKALANQFLEFLHKPESQHIISYHNVMN
                     PVLTDGVDPAFAAMPTYKTIEFTPPTTETIQKWLADWSKSW"
     regulatory      complement(1727..1870)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2154..3140
                     /locus_tag="PXB09_001787"
     CDS             2154..3140
                     /locus_tag="PXB09_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDL5233878.1"
                     /translation="MSQLIRTLKGHIRDEIIKKGGWVNAHAHADRAFTMTPEKITVYQ
                     NANLQQKWDLVDEVKRNSSVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAII
                     AAHKAREVYKNDIILKFANQTLKGVIEPNAKKWFDIGSEMVDMIGGLPYRDELDYGKG
                     LEAMDILMDKAKSLGKMLHVHVDQFNSPKEKETEQLCDKSIEHGMQGRVVAIHGISIG
                     SHPKEYRKMLYQKMRDSQMMVIACPMAWIDSGRKEDLQPFHNALTPADELIPEGITVA
                     IGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLEEMANIASINGRKVLGLV"
     gene            complement(3194..3613)
                     /locus_tag="PXB09_001788"
     CDS             complement(3194..3613)
                     /locus_tag="PXB09_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDL5233879.1"
                     /translation="MLGNILGSLASSVLSGNNQSTATQLIQNLLASQGGIEGLIAKFQ
                     QGGLDDVLRTWISSDEDNAPVSGEQISNVFGQENIQNVAQEAGVDAADASDLLAQFLP
                     KIVDTLTPNGNVEDLKNFDANDLLAQAAKGILGNLFK"
     gene            complement(3691..4446)
                     /gene="kdsB"
                     /locus_tag="PXB09_001789"
     CDS             complement(3691..4446)
                     /gene="kdsB"
                     /locus_tag="PXB09_001789"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDL5233880.1"
                     /translation="MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASR
                     VIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEP
                     LIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI
                     PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALW
                     HGEKIHIEPAKEAPQVGVDTPEDLERVRAILAR"
     gene            complement(4456..5409)
                     /gene="trxB"
                     /locus_tag="PXB09_001790"
     CDS             complement(4456..5409)
                     /gene="trxB"
                     /locus_tag="PXB09_001790"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDL5233881.1"
                     /translation="MTTKHTKLLILGSGPAGYTAAVYAARANLNPVLVTGMQQGGQLT
                     TTDEIENWPGEFEQITGTELMNKMLKHAEKFETEIVFDHIHSVDLSKRPFTLNGDLYT
                     FTCDALIIATGASAKYLGLPSEEHFKGKGVSACATCDGFFYRNKPVAVVGGGNTAVEE
                     ALYLANLASEVHLIHRRDSFRAEKILLGRLQKRIEEGKIILHTDRTVDEVLGDNMGVT
                     GLRLKSTKEELSEEIKVDGFFVAIGHAPNTAMFEGQLELENGYIKVKSGLEGNATATS
                     VEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERFLDAQEA"
     gene            5576..6646
                     /gene="dhaK"
                     /locus_tag="PXB09_001791"
     CDS             5576..6646
                     /gene="dhaK"
                     /locus_tag="PXB09_001791"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDL5233882.1"
                     /translation="MKKLINSIETVLDEQLSGFVKAHSDLTLNTEPVYIYRTTPSNQP
                     KVALISGGGSGHEPMHAGFIGKGMLDGACPGAIFTSPTPDQMFECGLAVDRGEGVLLI
                     IKNYTGDVLNFETATELLADSGVKVATVLVDDDVAVKDSLYTAGRRGVANTVLIEKLL
                     GAAADKGYNLSELAKLGHQLNNNGHSIGIALSACTVPAAGKPSFTLAENEMEFGVGIH
                     GEPGIERRPFENLDSTVKQMFETLIAHGDYQRKIRHWNTQTQQWDEIEESKVALKKGD
                     RVIALVNNLGAVPLSELYAVYDALEKECQTFGLSIERSLVGSYCTSLDMQGISITLLK
                     VDEDILKLWDAPVNTPAMRWGE"
     gene            6667..7293
                     /gene="dhaL"
                     /locus_tag="PXB09_001792"
     CDS             6667..7293
                     /gene="dhaL"
                     /locus_tag="PXB09_001792"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDL5233883.1"
                     /translation="MTISKQQILKWLENCQQVMTEKRDYLTELDTVIGDGDHGLNMQR
                     GFSKALEKAHTVQDKDIGTLLKTVGMTLLSQVGGASGPLYGSFFIKAAQGATGKEQLS
                     FNELLALLQQGAEAIVQRGHAQVGDKTMCDLWLPLLEDLAQADSTQPIAQILLQAVEK
                     AENFANQTAPLMAKKGRASYLGERSIGHKDPGATSSYYIFKALAEALQ"
     gene            7303..7710
                     /gene="dhaM"
                     /locus_tag="PXB09_001793"
     CDS             7303..7710
                     /gene="dhaM"
                     /locus_tag="PXB09_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDL5233884.1"
                     /translation="MVNLVIVSHSAKLAEGVGEILAQMAQGGCKIALAGGIEDTSNPI
                     GTDAVKIMQAIESVFSPDGVIVFVDLGSAILSTQTAIDLLEPELAEKVIISYAPLVEG
                     AFAAVVAASAGDSLEAVLNEANEAAALKQEQAN"
     gene            complement(7750..8595)
                     /locus_tag="PXB09_001794"
     CDS             complement(7750..8595)
                     /locus_tag="PXB09_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HDL5233885.1"
                     /translation="MDYFVNVNEQNFSEVWAAAAQVPTVFHFISPREVASLEMDALLR
                     RISDENPNQFLLATVNCDEQQALAAQFRIQQIPTLYLFAGGQPIDAIQGAVSEQELRI
                     RLANILPKEEELKFQQALELLQDQRYTEALPLLKSAWEMTDKKNSDFALLYAETYIAM
                     KSVEEAREILKAIPIQDRDSRWHGLQAQIELLEQASESPELQQLQADYANSKTPEIAI
                     KLANQLHQAHKNEEALTLLFDWLKSDLNVANGEVKSQFLAILSALGTDPIVPKFRRQL
                     YSLLY"
     gene            complement(8639..8965)
                     /gene="glpE"
                     /locus_tag="PXB09_001795"
     CDS             complement(8639..8965)
                     /gene="glpE"
                     /locus_tag="PXB09_001795"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDL5233886.1"
                     /translation="METTFKEISPQQAWELIENEGAVLADVRDARRYVYSHPQDAFHL
                     TNQSYGKFLDEVDYDEPVVVICYHGVSSQSTAQFLIEQGFENVYSVKGGFEAWERNGL
                     PIETSY"
     gene            9116..9574
                     /gene="exbB"
                     /locus_tag="PXB09_001796"
     CDS             9116..9574
                     /gene="exbB"
                     /locus_tag="PXB09_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDL5233887.1"
                     /translation="MEQLFQFLEHHTDFVILGLLGLLSVICLWKAIERIMFYSKVDIS
                     KYDTLEELDIDLTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIM
                     VNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLKWLALQSKKPHQAV"
     gene            9611..10048
                     /gene="exbD"
                     /locus_tag="PXB09_001797"
     CDS             9611..10048
                     /gene="exbD"
                     /locus_tag="PXB09_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDL5233888.1"
                     /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIQVNVPKAST
                     TQPMKADDLAKLLTITENNEFFFNDQAITKEQLIAEVATWDKSQKVSLKVDGAVAFEK
                     FVELTDILSANEIKNVAIITKKETAPAPSSTPGSPAQVPAVAP"
     gene            10064..10975
                     /locus_tag="PXB09_001798"
     CDS             10064..10975
                     /locus_tag="PXB09_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDL5233889.1"
                     /translation="MKKKHSRIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSM
                     EMVAALLEQPQVAVAPDPITEEVKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPK
                     KEKPKEEKRKERHHHKHKHRHKEKREELQEQEKPKDKPKERPKHHHKHIKALERGPEI
                     KQGIVAKAIPNAAEGEKVVAGVVGGQKNGSPNSTSTTGSANTGASSGNASELAAYKVA
                     LQRALQRKANNSYPQREKMMRKTGTVTIKFTITSSGSITNVSVLNSSGNSNLDNAAVR
                     SAEGLSMPPPPAGFPPTVTVPVRFALE"
     gene            complement(11044..11925)
                     /gene="cysZ"
                     /locus_tag="PXB09_001799"
     CDS             complement(11044..11925)
                     /gene="cysZ"
                     /locus_tag="PXB09_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDL5233890.1"
                     /translation="MSSVFSEPQNQVGLGFHYFIYGWRLLLQRQFLPFVIFPILINTV
                     LMVGLIWGFFANIGGLLDMLLPSWLEWLSFVLIPLIFLMILVGFYFAFTTLANFVAAP
                     FNALLAEKVELQLTGEPLGDMSFGAMLKDVPRMLKREWQKMMYSIPRLIALFVLGFLP
                     VVGQTVAPVLTFIFGAWLIAIQYCDYPFDNHKISFQRMRNALSQSRTLNFTFGALVSL
                     FTMIPFVNLVVMPVAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTET
                     RTGEVSPNVRNGDIRKQ"
BASE COUNT         3620 a         2555 c         2398 g         3374 t
ORIGIN      
        1 gcctcttaaa aaagaggcac cctgtaaagt tgattataag cctagctgct tttctcgaat
       61 ttcagctaaa gttttacagt caatacataa atcagctgtt gggcgtgctt ctaaacgttt
      121 aatcccaatt tctacgccac aggtttcgca ataaccatat tcatcttctt ggattttata
      181 caaggtttgc tcaatttttt tcaataattt gcgttcacga tcacggttac gaagctctaa
      241 actgaactct tcttcttgac tggctcggtc gttcggatcg gcaaagttag tcatatcttc
      301 ttgaagctgg cttttggtac gctccgcttc ttccataatt tgactgtgcc acgctttcag
      361 aattttggtg aaatgctcac gttgagcttc attcatatat tcttcgtctt ttttaagctc
      421 ataaggctca acgcctgcta atgctaataa accgagtgag gttttagccg cttgagtcat
      481 agatatttac tccttgttcc ctgtttattg gaagttttat tgttaaaatt attgcccgaa
      541 tacagactaa cttccttgta accgcactat acgaaaaaat caacatcttc gggttttaaa
      601 taatggcggc tataaataac acaaaaacga ctcattaatc aaatgaattt gcaaaaattt
      661 tgcattcaaa ttgatttgat tgcacaaaaa aatagccgaa catccattcg gctatttttc
      721 aaacactttt taccagctct ttgaccaatc ggctaaccat ttttggatag tttcagtagt
      781 cggtggcgta aattcaatgg ttttataggt tggcattgcc gcaaaagccg gatcaacgcc
      841 gtcggttaaa accggattca ttacgttgtg gtaagaaata atatgttgcg attccggttt
      901 gtgcaaaaat tcaagaaatt gatttgccaa tgctttttgt tggctgcttt tgacaatagc
      961 cgcattttct acttgcacca aatgcccttc ctcaaacgga gcagccacat atttatcggt
     1021 gttttcgtgc cacttatgat ataaaggcga tgtagtatag cttagtacca aatccgactc
     1081 gccttttaag aacgctccat aagtttcaga ccaacctttg cctaccgtta ccgtatgttt
     1141 tgccaatgtt ttccaagcag ttggagcttc atcgccatac acttgattta cccacattaa
     1201 gaagccccgc ccaacgctgc tggtacgtgg gtcttggtaa atcactttta aatcttggcg
     1261 ttccaccaac tcttttaaac tttttggtgg atttttcagc ttctctttat cgtaaataaa
     1321 agcataagaa cccgtgtcat aagggaagaa aattttctgt tgggtttcta atttggtctt
     1381 tgcttcaaac tcggcaaaca agccactttt ttcggcttca ggttgcagga aattatcaat
     1441 accgaccacc acatcagctt tggtttttgc tccctccaaa cgcaagcggt tgaacatcgt
     1501 tacgctatcg tcaagcggaa caaatttgac atcacagcca cactctttct caaaattctg
     1561 ctctaattta ggagcaggtc catattccga agcaaacgag ctgtaagtgt aaacggttaa
     1621 ggtcggttga ttggcataaa cacttgcact taataacgca agtgaagaga ggataaattt
     1681 cataacaatt ccttctaaat taaatgaata gaaggattta agaaaggcaa gttgctatct
     1741 caaatcccta cgctgatatt aatcagatca ggttctatgg gtatttctca gccacaagcg
     1801 gttaaatttc ggcaaaaatt tgcaaatttt tacgcaaaaa caaccgcttg ttgcacccca
     1861 atgagaacgg cttcattgta aaaagtttgc aggcagattt caaccaaagc aaacgtttgc
     1921 tatttgtatt aaaaatccgt atactaccgc cctagtccaa acaaggaact agaaatgaat
     1981 tgcacaacat cggttaaatc aaattcccaa cagctacgct tcaactttag aggcgtagct
     2041 gtttttctat tcatttcaaa ccattcaaaa tcgctgttat agcgattttt tttcgcacgc
     2101 ttgcaattac cgcaagcggt tgagccacat taacagagag aaaaggaata aaaatgagcc
     2161 aattgattcg taccctaaaa ggacatattc gtgatgaaat catcaaaaaa ggcggttggg
     2221 taaatgcaca cgcccacgca gatcgtgcat ttacgatgac gcctgaaaaa atcaccgttt
     2281 accaaaatgc gaatctacag caaaaatggg atttggtcga tgaggtaaaa cgtaattcaa
     2341 gcgtagaaga ttactaccgc cgcttttccc aagcgattga attgatgatt tcacaagggg
     2401 taacggcatt tggtactttt gtggatatcg accaagtatg tgaagacaga gccattattg
     2461 ccgctcacaa agcccgtgaa gtatataaaa acgacatcat cttgaaattt gctaaccaaa
     2521 cgttgaaagg cgtgattgaa cccaatgcga aaaagtggtt cgatatcggc tcggaaatgg
     2581 tggatatgat tggtggcttg ccttaccgtg acgaactgga ttacggcaaa ggcttggaag
     2641 caatggatat tttaatggat aaagccaaat cgctcggcaa aatgctccac gtccacgttg
     2701 atcaatttaa ctcacctaaa gaaaaagaga ccgaacaact gtgtgataaa tcgattgagc
     2761 atggtatgca agggcgagtg gttgccattc acgggatttc catcggctcg cacccgaaag
     2821 aatatcgaaa aatgctttac caaaaaatgc gtgatagcca aatgatggtc attgcctgtc
     2881 cgatggcgtg gattgatagc ggacgtaagg aagatttaca accgttccat aacgctttaa
     2941 cccctgctga tgaactcatt cctgaaggca ttactgttgc tatcggcaca gataatatct
     3001 gtgattatat ggtaccgctt tgcgagggcg atatgtggca agaactcagc cttttatcag
     3061 caggctgtcg ttttactaac ctagaagaaa tggcaaatat tgccagtatc aatggtcgaa
     3121 aagtactggg tttagtctaa ctgaataaac gaaaggcgaa ccctaggttc gcctttaata
     3181 acagcataac cgattattta aacaagttac ccaaaatccc ttttgccgct tgagctaata
     3241 agtcatttgc atcaaagttt tttaagtctt caacattacc attcggggtt aaagtatcca
     3301 cgatttttgg caagaactgg gctaataaat cgctcgcatc agcagcatca acacccgctt
     3361 cttgagccac attttgaatg ttttcttgcc cgaacacatt actgatttgt tcgcccgaaa
     3421 caggtgcatt gtcttcatcg ctgctgatcc aagtgcgtaa cacatcatct aatccgcctt
     3481 gttggaattt ggcaatcagc ccttcaatcc caccttgtga ggcgagtaaa ttttgaatta
     3541 attgagttgc agttgattgg ttattgccac tcaatactga agaagccaat gaacctaaaa
     3601 tatttcctaa cataatttct cctatgcaag cggtacaatt ttgcgaaaat tttgcaaaaa
     3661 aacagcaaac ttcgaccgct tgtaatcact ttaacgagct aaaatggctc gcactctttc
     3721 caaatcttcc ggcgtatcca cccccacttg cggggcttct ttcgccggtt cgatatgaat
     3781 tttttcaccg tgccataagg ctcttagttg ctcaagggac tcaagctgtt ctaattgtgt
     3841 cggctgccac gccacatatt gtttcacaaa accggctcgg taagcgtaaa tgccgatatg
     3901 gcgtaaataa ccttgagcgg caacaaaact gtcatcacaa tccggaaaac tgtctctggc
     3961 aaacggaatg ctggctcggg aaaaataaag tgccattccg tttttgtctg ccaccacttt
     4021 caccgcattt gggttaaata gctcttctcg ggtcgctaat ttcacaccga gtgttgccat
     4081 attgacttga taagcatcta aattttgagc tacctgagta acaattaccg gtggaatcag
     4141 cggttcatca ccctgaatat tcacaataat ttcgctgtcg gcaatctgca ttttttcgat
     4201 cacttccgcc aaacgctcag tgccggaatt gtgtttttcc gaagtcatac agacttccgc
     4261 cccaaaagat tgagcgaggg cttcaatttc agggtgatcg gtggcaataa tcacacggct
     4321 tgcaccggca agctgagctt tttcccaaac gtgttgaatc atcggtttgc ctgcaatatc
     4381 caacaacggc ttacgaggca aacggctgga agcgtaacga gcaggaataa ttacagtgaa
     4441 tttcataggc tatccttatg cttcttgagc atctaagaaa cgttctgcat ccagggctgc
     4501 catacaacct gtgccggcag aggtaatcgc ttggcgatag ttatgatcca tcacatcacc
     4561 ggcagcaaat acgccttcca cagaagtggc agtagcattg ccttccaaac ctgatttcac
     4621 tttaatgtag ccgttttcaa gttctaattg accttcaaac attgccgtat tcggtgcgtg
     4681 cccaatcgcc acaaagaaac catcaacctt aatttcttcg ctcaattctt ctttggttga
     4741 ttttaaacgt aagccggtaa cgcccatatt atcgcctaac acctcatcaa ccgtacggtc
     4801 tgtgtgcaga ataattttgc cttcttcaat acgtttttgc agacgaccaa gcaagatttt
     4861 ttcagcacgg aagctatcac ggcggtgaat taaatgcact tcacttgcca aatttgccaa
     4921 ataaagtgct tcttccacag cagtattccc accaccgact accgcaaccg gtttattgcg
     4981 atagaagaaa ccatcacaag ttgcacaagc cgacacgcct ttgcctttga aatgctcttc
     5041 agaaggcaaa cctaaatatt tcgccgacgc accggtggca ataattaacg catcacaggt
     5101 gaaagtgtat aaatctccgt ttagcgtgaa tgggcgttta gataaatcca ctgaatgaat
     5161 atgatcaaac acgatttcag tttcaaattt ttcagcgtgc ttgagcattt tgttcattaa
     5221 ctctgtgccg gtaatttgtt caaattcccc cggccagttc tcgatttcat cggttgtagt
     5281 gagctgtccg ccttgttgca taccggtgac taaaaccggg tttagattgg cacgggcggc
     5341 ataaacagca gcggtataac cggcaggccc tgagcctaaa attaaaagtt tggtgtgttt
     5401 agtggtcata atgaatcctc tgaataaata ttaatgttta ttttagccta aatttcagtt
     5461 caactctatt ttcgttttcg ctcaactttt ttcaattttg tgacaaagtt aacagaaatc
     5521 cgactgtgtt tcttgtaaat tgtgacagtc taattcattt aaaaggggca aaaagatgaa
     5581 aaaattaatt aattcaatag aaaccgtctt agatgagcaa ctttctggtt ttgtgaaagc
     5641 acattctgat ttaacactta acacagaacc tgtctatatt taccgcacaa cgccaagtaa
     5701 tcaacctaaa gtagccctta tttccggtgg tgggagtggg cacgagccaa tgcacgccgg
     5761 ttttatcggt aaaggaatgt tagacggagc ttgccccgga gcaatcttta catctccaac
     5821 gccggatcaa atgtttgaat gcggtttagc ggttgatcgt ggcgagggtg tattgctaat
     5881 tattaaaaac tataccggtg atgtgctgaa ttttgaaaca gccaccgagc tacttgcaga
     5941 tagcggtgta aaagtcgcaa ccgtgttggt tgatgatgat gtggcagtca aagacagttt
     6001 atatactgcc ggccgccgcg gtgttgcaaa tacagtatta attgaaaagc tgttaggagc
     6061 tgcagcggat aaaggctata acttatccga attagccaaa ttagggcatc agttaaacaa
     6121 taacgggcat tctatcggaa ttgccttatc tgcttgtact gtgccggctg ccggtaagcc
     6181 atcatttact ttagctgaaa atgagatgga atttggggta ggtattcacg gagaaccggg
     6241 cattgaacgt cgcccctttg aaaatctgga tagtaccgtg aaacaaatgt ttgagacctt
     6301 aattgctcac ggcgattatc aacgtaaaat tcgccattgg aatacacaaa cccaacaatg
     6361 ggacgaaatc gaagaaagca aagtggcatt gaaaaaaggt gatcgtgtta ttgctttagt
     6421 taataactta ggagcagtgc cactatccga actttatgct gtttatgatg cgttagaaaa
     6481 agagtgccaa actttcggct taagcattga acgcagtctt gttggatcat attgcacctc
     6541 gctggacatg caaggtatct ctatcacatt actgaaagtt gatgaggata ttctcaaact
     6601 atgggatgct ccggtaaata caccggcaat gcgttggggt gaataattag attgaaagga
     6661 taagttatga caatatcaaa acaacagatc ttaaaatggc ttgaaaattg ccaacaggta
     6721 atgactgaaa aacgggatta tttaaccgaa ttggataccg ttattggcga tggcgatcac
     6781 ggtttaaata tgcagcgtgg atttagtaaa gcacttgaaa aagcccatac cgtgcaagat
     6841 aaagatatcg gcaccctgct taaaaccgtt ggaatgacat tattatcgca agtaggggga
     6901 gcgagcggcc ctctctatgg ttcatttttt attaaagcgg ctcaaggtgc tacaggcaaa
     6961 gagcaactga gctttaacga gttactggca cttctacagc aaggagcaga agctatcgta
     7021 caacgtggac acgcacaagt tggcgataaa acgatgtgtg atttatggct gccattactc
     7081 gaagacttag ctcaagccga tagcactcaa ccaattgctc aaatcttatt acaagcggtc
     7141 gaaaaagcag aaaattttgc aaatcaaacc gctccattaa tggcgaaaaa agggcgtgcc
     7201 agttacttgg gcgaacgcag tatcgggcat aaagatccgg gagcaacgtc cagctactat
     7261 atttttaaag ccttagctga agcattacag taggaggggt aaatggttaa tttagtgatt
     7321 gtttcacata gtgctaaact ggcggaaggc gtgggggaaa ttttggctca aatggcacag
     7381 gggggctgta aaatcgccct tgccggcggc attgaggata cctcaaatcc tatcggcact
     7441 gatgcggtaa aaataatgca agcgattgaa tcggtattta gcccagacgg tgtgattgtg
     7501 tttgtcgatt taggcagtgc aattttaagt acccaaaccg ccatagattt actggagccg
     7561 gaacttgccg aaaaagtgat cattagctac gctcctttag ttgaaggtgc ttttgctgct
     7621 gtagttgcag cctctgccgg cgatagttta gaagcggtat taaatgaagc gaacgaagcc
     7681 gctgctctta agcaggaaca agccaattag taaaaatgcc gtatcgaaaa atacggcatt
     7741 ttagttttat tagtacaata gtgaataaag ctgtcttcta aatttcggca caatcgggtc
     7801 tgtacccagt gcagataaga ttgccagaaa ttggcttttt acctcgccgt tcgctacatt
     7861 taaatccgat tttaaccaat caaaaagtaa cgtgagtgct tcttcatttt tatgagcttg
     7921 gtgtagctga tttgccaatt taatcgcaat ttcaggggtt ttgctgttcg cataatccgc
     7981 ttgaagctgt tgtaattcgg gcgattcgct ggcttgttcc aataattcga tttgggcttg
     8041 caaaccgtgc caacggctgt ctctgtcttg aatcgggatc gctttaagga tttcacgagc
     8101 ctcttccacg cttttcattg caatgtaagt ttcggcatag agcaaagcga aatcgctgtt
     8161 tttcttatcg gtcatttccc acgctgattt cagcagcggc aaggcttcgg tataacgctg
     8221 atcttgcaat aattccaagg cttgttgaaa tttcagctct tcctctttcg gtaaaatatt
     8281 tgccaaccga atccgtaatt cctgctcact tactgcacct tgaattgcat caatcggctg
     8341 accgccggca aacaaataga gcgttggaat ttgttgaatg cgaaattgag cagccaatgc
     8401 ttgttgctca tcacaattta ccgtcgccaa taaaaattgg ttagggtttt catccgaaat
     8461 acgacgtagt aaggcatcca tttccaatga agccacttcc cttggcgaaa taaaatgaaa
     8521 caccgtcggc acttgtgccg ctgctgccca tacttcacta aaattctgct cgtttacatt
     8581 tacaaagtag tccatacaaa accttcttaa gctaaaaatt actttttata ttgtagcatt
     8641 aataagaagt ttcaataggt agcccgtttc tctcccacgc ttcaaaacca ccttttacac
     8701 tataaacatt ctcaaaccct tgttcgatta aaaactgtgc tgtactttgg ctactcactc
     8761 cgtgatagca aatcacaacc accggttcgt cataatcgac ctcgtctaaa aacttaccat
     8821 aactctggtt ggttaaatga aacgcatcct gtgggtggct gtaaacataa cggcgggcat
     8881 cacgcacatc ggcaagcacc gcaccttcgt tttcgattaa ttcccaagcc tgttgcgggc
     8941 taatttcttt aaatgtagtt tccataatca ctttccctca aaaaacgtgc aactatacca
     9001 taaaattcta aaaagaatgg ctattattcc aagttgaaaa tttgatgttt gtcagatata
     9061 attgcaaact attttcaaat gcactgattt aaaactacca cagtttgagg attttatgga
     9121 gcaattattt caatttttag aacatcatac tgactttgtt atattaggat tactaggctt
     9181 attaagcgta atctgccttt ggaaagctat tgaacgtatt atgttttatt ccaaagtaga
     9241 tatttcaaaa tacgataccc tcgaagaatt agacatcgat ttaacccaca atttaactac
     9301 catttcgact atcggctcta atgcccctta tatcggctta ttaggaaccg ttgtcggtat
     9361 tcttttaact ttctatcatt taggtcaatc aggtggtgat attgatgcgg cctctattat
     9421 ggtaaacctt tctttagctc taaaagccac tgctgtcggt atcttagtgg caattattgc
     9481 aatggttttc tacaatggtt ttggtcgtaa agtggaagaa aacaaactga aatggttggc
     9541 attacaatca aaaaagcctc atcaagcggt gtgatttagt ccattttttg caaattaata
     9601 aggcagaaca atgaaaaaat tcgatgaaat caacatcatt ccatttattg atattatgtt
     9661 ggtattactg gctatcgtgt tagttaccgc ctctttcatt tctcagggta aaatccaagt
     9721 aaatgtaccg aaagcaagta caacacagcc aatgaaagca gacgatttag cgaagctttt
     9781 aaccattacc gaaaataatg agtttttctt taatgatcaa gcaataacta aagagcaatt
     9841 aattgctgaa gttgccactt gggataaaag ccaaaaagtg tcactcaaag ttgatggtgc
     9901 agtcgccttc gaaaaatttg tggaattaac cgatatcctt tctgcaaatg aaattaaaaa
     9961 tgtagcaatc attactaaaa aagaaactgc tccagcacct tcaagcacac ctggtagccc
    10021 tgcacaagtg ccagcagtcg caccttaaat agggtaaaca ggtatgaaaa aaaaacattc
    10081 tcgtatcggc ttattggcat ctttggctat tcacactgcc ttaattggtg gcacttttgc
    10141 ttggttacat aaccacaaag tggaaaaaat tgccgagcaa aactctcttt ctatggaaat
    10201 ggtggcagca ttattagagc aacctcaggt tgccgttgct ccggatccta ttaccgaaga
    10261 ggtcaaagaa atcgaaccgg agaaggcaga agtaccacct gaacctaagc ttactccgga
    10321 gccaactcca gagccggagg caattccaga tcctacgcta aatccgaaaa aggaaaaacc
    10381 gaaagaagaa aagcgtaaag agcgacacca ccataaacat aagcatcgtc acaaagagaa
    10441 aagggaagag ctacaagagc aagaaaaacc gaaagataag cctaaagagc gcccgaaaca
    10501 tcatcacaag catattaaag cattagagcg cgggccagag ataaaacaag gtattgtcgc
    10561 taaagcgatt ccaaatgcgg ctgaaggtga aaaagtggtt gcgggggttg ttggagggca
    10621 aaaaaacggt tcaccaaatt caacctcaac tacaggttca gcaaatactg gggctagcag
    10681 tggtaatgcc agtgaacttg ctgcttataa agtcgcatta cagcgagcat tacagcgtaa
    10741 ggcgaataac tcttaccctc agcgtgaaaa aatgatgcgg aaaaccggta cagttacgat
    10801 taaatttacc attacatcgt ccggttcaat tacaaatgta tccgtactca attcatcggg
    10861 aaatagtaat ttagataacg ctgcggtacg cagtgcagaa ggtttgagta tgcctccgcc
    10921 accggcaggc ttccctccta cggtaacagt accggtaaga tttgcccttg aataaaaaca
    10981 gccctcaaaa gcaatgtact tttgagggct ttttattgca aaaaattgac taaaaatgac
    11041 cgcttactgc ttgcgaatat cgccatttct cacattcgga ctcacttcac ccgtacgagt
    11101 ttctgtgctt aacgaggtag aatttacttt cgtaaaagta taatccgctt tgctgaattc
    11161 acctgtttga ttatttaaga agaaattgcg gtactctttt acccataatg ccgttgcgcc
    11221 acaaactgcc acaggcataa ctactaaatt cacaaatgga atcatcgtga ataggctcac
    11281 taaagcacca aaggtaaaat ttaaagtgcg agactgcgac aacgcatttc gcatacgctg
    11341 aaaactgatt ttatggttat caaacggata gtcacaatat tgaatggcga tcaaccaagc
    11401 accgaagata aaagtcagca caggtgctac ggtttgccca accacaggca aaaagcctaa
    11461 tacaaaaaga gcaatcagcc ttggaatgct atacatcatt ttttgccatt ctcgtttcag
    11521 cattcgaggc acatctttta acattgcacc gaatgacata tcgcccaaag gctcgccggt
    11581 aagttgcagt tcgacttttt ctgctaataa cgcattaaag ggagcagcaa caaagttagc
    11641 caaggtagta aaagcaaaat aaaatcccac taatatcatc aaaaaaatca gtggaatcag
    11701 tacaaagcta agccattcca gccagcttgg cagtaacata tccaacaagc caccgatatt
    11761 ggcaaaaaat ccccaaatca gccctaccat cagcacggta ttaataagaa ttgggaaaat
    11821 cacaaaaggc aaaaattgac gttgtaacaa taaccgccag ccatatataa aataatgaaa
    11881 gcctaatccg acttgatttt gcggctcaga aaaaactgaa gacataatga ttccttattt
    11941 tctatca
//
LOCUS       DANLTI010000083        11920 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.083, whole genome shotgun sequence.
ACCESSION   DANLTI010000083 DANLTI010000000
VERSION     DANLTI010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11920
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.083"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..580
                     /locus_tag="PXB09_001800"
     CDS             <1..580
                     /locus_tag="PXB09_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5233891.1"
                     /translation="NRKFIAVQYPEEIDIKSKNGKVAKQFCQRKNLPLYITEISKERI
                     RRAGKQILQNNPENRPLDVGFKVFKLTESHFKQWQSPTSENLADQLEMFIDPVSEKAD
                     TQAVLYELLLRLGLKLTAKVRLENKVFWVEENGLIFALLLNAADEEIIQTVIAQQPKK
                     VIALDRLFNGNDARKKNTELQMQDAGITFFVI"
     gene            590..3226
                     /locus_tag="PXB09_001801"
     CDS             590..3226
                     /locus_tag="PXB09_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5233892.1"
                     /translation="MELQFETLEYQLQAVNATVNLFVGQPNAATEFSLKAQNDMRFVP
                     NLGLQISDEQLQQNLANLQNRQKIDRTLLVEQGKNFTVEMETGTGKTYVYLRTIFELN
                     RQYGWQKFVIVVPSVAIREGVLHTLETTKSHFNTVFDNPSVNQKFEYKSNQTSRLKSF
                     ASANHIEILVMNIDAFTKESNVINTVNESGDAPIFYIQQANPIVIIDEPQNMETEIRR
                     NAIESLSPLFTLRYSATHKNAYNPIFSLNPVQAYEMGLVKQIEVDSVLAENEVNGAYL
                     SLKEIKTGAKSWSAKIEILFNDKKAMKKKVISVKPNQDLYELSNQNEMYRSGFILSGM
                     DTDSQMVSFSNGTQIFQGAEHSQLKEDVQKMQIRRTIGEHLQKEKKLRPLGIKVLSLF
                     FIDKVDNYRPSAQSPTGGKFAKWFEEIYLELAKEEPQGVHNGYFSQDKKGVAKDTNGT
                     TQADNETYQLIMRDKEKLLSLENPLRFIFSHSALKEGWDNPNVFQICTLNDTASEMKK
                     RQEIGRGLRLPVNQQGLRIYDRHLNTLTIIANESYEQFAATLQREIEEDCGVQFAKSN
                     VKKREDKKAVRYRKDFSLHPEFAAIWERIKHQTTYRVDFSNAELIESAVEKIRKMPDI
                     EATKIKHSKVKLEMNETGISTNYRSSNETAVNTQWAIPDLLSEIQKKTGLTRATLCKI
                     LQKSDRLQEVFRNPQRFIDLIAEKINLALQQIMTDGVEYHKIAGKTYEMTLFGDFDFY
                     LNQYTFEVQDKTKTIYEDYIALDSQTENIFARHCESSEQVEFYFKLPKRFKIPTPLGS
                     YNPDWAVVFKGENKIYLVAETKNTGKGIQAGVDEEKLDESERMKIDYARKHFKGLQRD
                     YKDLDYRVVQKVEELSAEYCKI"
     gene            3358..5790
                     /gene="gyrB"
                     /locus_tag="PXB09_001802"
     CDS             3358..5790
                     /gene="gyrB"
                     /locus_tag="PXB09_001802"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDL5233893.1"
                     /translation="MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHM
                     VFEVVDNAIDEALAGHCKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTV
                     LHAGGKFDDNSYKVSGGLHGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLA
                     IIGNTEKTGTSVRFWPSLDIFKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKE
                     EHFKYEGGIKAYVEYLNEGKTHIHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTN
                     NIPQRDGGTHLAGFRGALTRALKNYMDNSGVLKKADANIDASGDDAREGLVAVISVKV
                     PDPKFSSQTKDKLVSSEVRGAVESSMNEALSDYLAENPDDAKNIVTKIIDAARAREAA
                     RKAREMTRRKGALDLGGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRKNQAI
                     LPLKGKILNVEKARFDKMLSSQEVATLITALGTGIGRDDYNLEKLRYHKIIIMTDADV
                     DGAHIRTLLLTFFYRQMPELIENGYIYIAQPPLYKVKKGKQERYIQDNDEMSQYEIDI
                     ALEGAGLYVSEDAPALSGVALENLIAQYNGVQKLIERLSRRYPTLLLNELIYSKPLSV
                     EFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLFNEERQIYEPEIIVTTHGMDSTY
                     RLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERRQEISSFAEALDWLVKESRKG
                     LTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAADKLFSTLMGDEVEPRRDF
                     IETNALYAQLDI"
     gene            complement(5843..6805)
                     /gene="cmoB"
                     /locus_tag="PXB09_001803"
     CDS             complement(5843..6805)
                     /gene="cmoB"
                     /locus_tag="PXB09_001803"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005707797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDL5233894.1"
                     /translation="MIDFRPFYQQIATTDLSAWLETLPLQLKQWEKTTHADYAKWAKV
                     ADFLPNSTACINLKDKVESISSKPLSEGEVKQITHHLKQLMPWRKGPYHLHGIHIDTE
                     WRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFE
                     AVRKLLGNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVRGG
                     ELVLETLVIDGDINDVLVPADRYAKMKNIYFIPSVAALINWLEKVGFKNVRCVDEAIT
                     TLEEQRKTDWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANA"
     gene            complement(6902..8665)
                     /locus_tag="PXB09_001804"
     CDS             complement(6902..8665)
                     /locus_tag="PXB09_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDL5233895.1"
                     /translation="MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNV
                     WSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFV
                     HYPTEKWFPIDDEAIPPMEMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYV
                     RQSDNETVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLP
                     EIPQSVIDGYPTIKASIEKLEQEDFPILCYDASLGGEFPVICVILLNPNNGTCFASFG
                     AHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLETHFIDSSGLISWD
                     LFKRDADYPFVHWDFSGTTEQEFNNMMAIFNKHNQPVYIMDYEHLGVYACRILAPGMS
                     NIYPSDDLVYANNNMGMDWREILLDLPHFHHDAETYQELLDELDEQSIDDLTRVREFI
                     GVVAEKGSAMQTLRIGELKSMLHLALGNLEQASDWANWTANMNASVFSAERNNYYRCL
                     IQSIELFLDEERDSEQYRMVFEKMYGKQAVEAAWGAIQGGNPFHGLTASDESLENMTA
                     HQKLLNAYRKVQKAKVNPIAR"
     gene            8929..11217
                     /locus_tag="PXB09_001805"
     CDS             8929..11217
                     /locus_tag="PXB09_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
                     /protein_id="HDL5233896.1"
                     /translation="MEEHTIQSFYAHSGKLSDHSDWQTLLSHANNVGLLAAEFAAPFA
                     SQEIARCTGLLHDLGKYSERYQKRLHGGERVNHSTAGAKIAVERWGPLGKMMAFCIAG
                     HHAGLANGSGEGKNRSTLTQRLQEQFGYGHKDLPVLDAIWQQELNLPEKLPLPPLKPS
                     KNEPFFSYAFFIRMLYSCLVDADFLDTEAFYANLEKRPLERGNYPNLTALHQQFNQFI
                     AQFRERIATQTPNTQEAQRKAEVNRLRSEILDYAVSQAKQETGLFSLTVPTGGGKTFT
                     SMAFALEHAKQYGLCRIIYVIPFTSIIEQNAAEFRKAFGELGTEAVLEHHSTFDHDSL
                     PDKSSRDKLKLASENWDTPVVVTTAVQFFESLFADRSSRCRKLHNIVGSVIILDEAQM
                     LPLNLLRPIMAAIDELARNYQCSVVLCTATQPAIHQANGFYKGFENVREIAPNPTALF
                     EKLKRTTVKHIGIQTDVELQSKLADNPQMLIIVNNRRHARALYDSAKQLEGAYHLTTL
                     MCAKHRSQTLTEIRLRLKQNLPCRVIATSLIEAGVDVDFPLVMRAEAGLDSVAQAAGR
                     CNREGKRLSVESNVWVFQPEEQWKAPPELGLLSGCMRSTVQVHADDLLNPKAINHYFQ
                     AVYEAKGKELDKPNILKACHDAGQSLNFPFQKIAEDFRMITSHLIPVIIPFDQEAENL
                     IDRLRYADQVGGILRKLQPYTVQVPEKALAELYNAGRVETINETNFGKQFYCLIGMDL
                     YDEVAGLSWENVDFLESEKLVL"
     gene            11348..>11920
                     /locus_tag="PXB09_001806"
     CDS             11348..>11920
                     /locus_tag="PXB09_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233897.1"
                     /translation="MREPLLDEDELKKWLQTIFTDNLVIIVGSGLSCAEGLPGMGALA
                     DRLKERMPECLDDIDKVTWNTISDCLDSEGLEGALLKHQANETIEAAIIKITAEYVLS
                     EEQKAINKCIAENQKLKFSYLLPHISASNPKIARVITTNYDRLIEFAAEYENWGIDSM
                     MVGRYWGKHNPDLSRKLQIRDIRVKGKCPKL"
BASE COUNT         3752 a         2285 c         2565 g         3318 t
ORIGIN      
        1 taatagaaaa tttattgcgg ttcaatatcc tgaagaaatt gatatcaaga gtaagaatgg
       61 aaaagtagca aagcaatttt gccaaagaaa aaatttacca ctatatataa ctgaaatttc
      121 aaaagaacgt attcgccgtg ccggaaagca gattttgcaa aataaccccg aaaaccgacc
      181 gcttgatgta ggttttaaag tcttcaaact gacagaaagc cattttaaac aatggcaatc
      241 gcccacatct gaaaatttag ccgatcaact tgaaatgttt attgatcctg ttagtgaaaa
      301 agcggatacg caagccgttt tatatgagct tttattgcgt ttagggttaa aactcacggc
      361 aaaagtgcgg ttggaaaata aggtgttttg ggtggaagaa aacgggctga ttttcgcctt
      421 gctgttaaat gcagccgacg aagaaattat tcaaactgtt atcgctcaac aaccgaaaaa
      481 agtcatcgct ttagaccgtt tattcaacgg caatgatgcc cggaagaaaa acaccgaatt
      541 gcaaatgcaa gatgccggca ttacgttttt tgtgatttaa ggagaaaaaa tggaactcca
      601 atttgaaacc ttagagtatc aattacaagc cgttaatgcc acagtaaatt tgtttgtcgg
      661 acagccgaat gccgcaactg aattttcact caaagcccaa aatgatatgc ggtttgtgcc
      721 gaatttaggc ttgcagatta gtgatgagca gttacaacag aatttggcta atctgcaaaa
      781 caggcaaaaa atcgaccgca ctttgcttgt cgaacaggga aaaaatttta ccgtggaaat
      841 ggaaactggt acagggaaaa cctatgtcta tttacgcacg atttttgaat taaaccgtca
      901 atacggctgg caaaaatttg tgattgtcgt gccgagtgtg gcaattcgtg agggagtgtt
      961 gcatacgttg gaaactacaa aaagccattt taatacggta tttgataacc cgagcgtcaa
     1021 tcaaaaattt gaatataaaa gtaaccaaac ttcacgctta aaatcctttg ctagtgctaa
     1081 tcatattgaa attttagtga tgaatattga tgctttcacc aaagaaagta acgtgattaa
     1141 taccgtgaat gaaagcggtg atgctccgat tttctatatt caacaggcga atccgattgt
     1201 gattattgat gaaccgcaaa atatggaaac ggagattcgc cgtaatgcga ttgagagttt
     1261 aagtccgctt ttcactttgc gttattctgc cacccataaa aatgcgtata acccgatttt
     1321 tagcctcaat ccggtgcaag cctatgaaat gggattagtt aaacaaattg aggtagatag
     1381 cgtattggcg gaaaatgagg taaatggagc ttatctttcc ctcaaagaga ttaaaacagg
     1441 ggcaaaaagc tggtcggcaa aaatcgaaat tttatttaac gataaaaaag cgatgaaaaa
     1501 gaaagtgatt agcgtgaaac cgaatcagga tttgtatgag ctttccaacc aaaatgaaat
     1561 gtatcgttca gggtttatat taagcggaat ggataccgat agccaaatgg ttagcttctc
     1621 caacggcaca caaatttttc aaggggcgga acattcccaa cttaaagaag atgtgcaaaa
     1681 aatgcagatt cgccgcacta ttggcgagca tttgcaaaaa gaaaagaaat tacgaccgct
     1741 tgggatcaag gtgttgtctt tgttctttat cgataaagtg gataattatc gcccttctgc
     1801 acaaagccct acggggggaa aatttgcaaa atggtttgag gaaatttatt tggagctagc
     1861 caaagaagag cctcaaggcg tgcataacgg ttatttctca caggataaaa aaggcgtagc
     1921 aaaagatact aatggcacaa cgcaagcgga taacgagact tatcaactga ttatgcggga
     1981 taaagaaaaa ttgctttcgc tggagaatcc gttacggttt attttctcgc attctgcctt
     2041 aaaagaagga tgggataatc cgaatgtgtt tcaaatttgt actttaaacg atactgcaag
     2101 cgaaatgaaa aaacgccaag agattgggcg gggcttgcgt ttgcctgtga atcaacaagg
     2161 attgcggatt tatgatcgtc atctaaatac gctgacaatt atcgcaaatg aaagttacga
     2221 acaatttgcc gccacattac agcgtgaaat tgaggaagat tgtggtgtac agtttgccaa
     2281 aagcaatgtt aaaaaacggg aagataaaaa agccgttcgc taccgtaaag atttcagctt
     2341 acatccggaa tttgcggcaa tttgggaacg gattaaacac caaaccactt atcgggtaga
     2401 tttcagtaat gcggaattga ttgaaagtgc ggtggaaaaa atccgcaaaa tgcccgatat
     2461 cgaggcgaca aaaattaagc attccaaagt gaaattggaa atgaatgaaa cagggatttc
     2521 aactaattat cgctcatcta atgaaacagc ggtaaataca caatgggcga tacctgattt
     2581 attgagtgag attcaaaaga aaaccgggct gacgcgtgcg accctttgca aaattttaca
     2641 aaaatccgac cgcttgcaag aagtcttccg caatcctcaa cgctttattg atttaattgc
     2701 agagaaaatc aaccttgctt tacaacaaat tatgacagac ggggtggaat atcacaaaat
     2761 tgccggaaaa acctatgaaa tgacgttatt cggcgatttt gatttttacc tcaatcaata
     2821 tacttttgaa gttcaagata aaacaaaaac gatttatgaa gactatattg cactggattc
     2881 ccaaacagaa aatatcttcg cccgacattg tgaatctagt gagcaagtgg agttttattt
     2941 taaattaccc aaacgtttta aaattccaac gccattaggc agctataatc ccgattgggc
     3001 agttgtgttt aagggagaaa ataaaattta cttggttgcc gaaacgaaaa atacaggcaa
     3061 aggtattcaa gcaggagtag atgaagaaaa attagatgaa agtgaacgaa tgaaaatcga
     3121 ctatgcccgt aagcatttca aaggcttaca gagagattat aaggatttgg attatagggt
     3181 tgtacagaaa gtggaggagc tgtctgcgga gtattgtaaa atttaatctg tggtcttgta
     3241 gaattgagat agactgcaat ttcaactaaa atttaaccgc ttgttttgcg atacttttac
     3301 gcatttttct gctataatcg gcacaatttt ttcgatttca aattagtagg aataagaatg
     3361 tctgaacaaa ctcaagcaac aagttatgat tcttccagta ttaaggtgtt acgcggctta
     3421 gatgcggtgc gtaaacgccc gggaatgtat atcggcgata ccgatgacgg tacgggctta
     3481 caccatatgg tgtttgaggt ggttgataat gcgattgacg aagcattagc cgggcattgt
     3541 aaagacatta ttgtcacaat tcattccgat aattcggttt ctgtgcaaga tgacggtcgt
     3601 ggaattccgg tggggattca cccggaagaa ggcgtttcgg cagcagaagt cattatgact
     3661 gttcttcacg caggcggtaa atttgacgat aactcctata aggtttccgg cggtttgcac
     3721 ggtgtgggcg tatcggtggt gaatgcactt tcctctaaat tacaactcac tattcgccgt
     3781 gaaggacacg ttcacgagca attctatagc ttaggtgagc ctgatgcacc tttagcgatt
     3841 atcggcaata ccgaaaaaac ggggacgtcg gttcgtttct ggccaagttt ggatattttc
     3901 aaaaataaaa ccgaatttga atataaaatt ctgtctaaac gcttgcgtga actatcattt
     3961 ttgaattcag gcgtttcgat taaattaatt gatgaacgag acggcaaaga agagcatttt
     4021 aaatatgagg gcggtattaa agcctatgtt gagtatttaa acgaaggcaa aactcatatt
     4081 cacaatacgc cattctattt gaccactgag aaagacggca ttggcgtgga aatttcccta
     4141 cagtggaatg acagttacaa cgaaaatgtg tactgcttta ccaataatat tccacagcgt
     4201 gatggcggta cgcacttagc cggtttccgt ggggcattaa ctcgtgcgtt gaaaaactat
     4261 atggataaca gcggggtatt gaaaaaagcc gatgcgaaca ttgatgcctc aggtgatgat
     4321 gcccgtgaag gtttagtagc ggtgatttcg gtgaaagtgc cggatccgaa attctcctca
     4381 caaaccaaag ataaattggt gtcgtcagaa gtgcgtggag cagtggaaag ctcaatgaat
     4441 gaggctttat ccgactattt agccgaaaat ccggacgatg caaaaaatat cgttaccaaa
     4501 attattgatg cagcccgtgc aagagaagca gctcgtaaag cccgtgaaat gacccgccgt
     4561 aaaggggcgt tagatttagg cggcttaccg ggtaaattag ctgattgtca ggaaaaagat
     4621 ccggcgttat cggagcttta cttggtggag ggtgactctg ccggtggctc ggcaaaacaa
     4681 gggcgtgacc gtaaaaacca agcgattttg ccgttaaaag ggaaaattct gaacgtggaa
     4741 aaagcccgct ttgataaaat gctttcttca caagaagtag caaccttgat taccgcttta
     4801 ggcacaggca tcgggcgtga tgattataat ttggaaaaat tacgttacca caaaatcatt
     4861 attatgaccg atgcggacgt ggatggtgca catattcgta cgcttttatt aactttcttc
     4921 taccgtcaaa tgccggagct gattgaaaac ggctatattt atattgcaca gccaccgctt
     4981 tataaagtga aaaaaggcaa gcaagagcgt tatattcaag ataacgatga aatgtcgcaa
     5041 tatgaaattg atattgcatt agaaggtgca ggcttatatg tgagtgaaga tgctccagcg
     5101 ttaagtggcg tagcgttaga gaacttaatt gcccaatata acggcgtaca aaaattaatt
     5161 gaacgtttaa gccgtcgtta cccaacatta ttacttaacg aattaattta ttcaaaaccg
     5221 ctttcggtgg aatttgcaaa aaatcaagca aatatgaccg cttggagcga gcaatttgtc
     5281 gctacattga tggcaaaaga ggtgggcggc agtttctacc gtattaatac cttgttcaat
     5341 gaagaacgcc aaatttatga gccggaaatt attgtgacta cacacggtat ggacagtacc
     5401 tatcgtttag attacaactt tatcaacggt aatgaatacg ctcgcattgt ggcattaggc
     5461 aacgagctga acgatttact atctgattca gcctatgtgg tgcgtggtga acgtcgccaa
     5521 gaaatcagca gttttgctga agccttagat tggttggtga aagaatctcg taaaggctta
     5581 actattcaac gttataaagg gttaggtgag atgaatccgg aacaattatg ggaaaccacg
     5641 atggatccgg tggctcgtaa aatgctacag gtcaatatta ccgatgcgat tgcggcagat
     5701 aaactcttca gtacgctgat gggcgatgaa gttgaaccac gccgagattt cattgaaact
     5761 aacgctttgt atgctcagtt agatatttag ttaaaaaatc cgcatttgac atgcggattt
     5821 tttattctct taaactagca ttttaagcat tcgctaaaat caccgcccgc ttcggagcag
     5881 ggtagccttc aatggttttg ctatgatcgt ttggatctaa aaaatccact aaactttcat
     5941 tttccaacca atcggttttt cgctgctctt ctagtgtagt gattgcctca tcaacacaac
     6001 gcacattttt aaagccgact ttttccagcc aattaatgag tgcagcaaca gaaggaataa
     6061 aatagatatt tttcattttc gcatagcgat cagccggcac taaaacatca ttaatatcgc
     6121 catcaatcac cagcgtttct aacaccaatt caccgcctct gactaattgg gctttgagtt
     6181 gagaaagatg atcaagcggt gatttgcgat gataaagcac ccccattgaa aacacggtat
     6241 caaaagcagc aagcggttgc atttgctcaa taccaagtgg aatcagatta gcccgtctat
     6301 cattccctaa gagtttccgc actgcctcaa attggcacag gaacagctcg gtcgggtcaa
     6361 taccaactac catttttgcc ccttcgccta ccattcgcca catatgataa ccgctaccgc
     6421 agccgacatc taaaatggtg cggtctttta acggtgcaag atgcggaagc acacgatccc
     6481 atttaaaatc ggaacgccat tcggtatcaa tatgaatccc gtgtagatga taagggcctt
     6541 tacgccacgg cattagttgc tttaaatggt gggtaatttg cttgacttcc ccctcagata
     6601 aaggcttgct tgaaatagac tcaaccttgt cttttagatt gatacaagcg gtcgaatttg
     6661 gtaaaaaatc tgcaactttt gcccacttgg catagtcagc gtgggtggtc ttttcccatt
     6721 gtttgagttg taagggtaag gtttctaacc aagcagaaag gtcggttgtg gcaatttgtt
     6781 gataaaaagg acgaaagtca atcattttga aatttatgtc taggggagag acctatgccc
     6841 tcccgaaagg tagtaaatag aaaggacagg cacagaacct acccctacga aaaatataaa
     6901 attatctcgc aatcggattt actttcgctt tttgcacttt gcgataagcg ttcagtaatt
     6961 tctgatgtgc agtcatattt tcaagcgatt cgtccgatgc agttaaaccg tggaacgggt
     7021 taccgccttg gattgcaccc caagcagctt caaccgcttg tttaccgtac attttctcaa
     7081 acaccatacg atattgttcc gaatcacgct cttcatctaa gaacaactca atcgattgga
     7141 ttaagcagcg gtaataattg ttacgttctg ctgagaatac gcttgcattc atattcgctg
     7201 tccagtttgc ccagtctgag gcttgctcta agttacctaa agctaaatgc agcatcgatt
     7261 taagctcacc gatacgcaat gtttgcattg cagagccttt ctctgccacc acgccaataa
     7321 attcacgcac acgggttaaa tcatcaatgc tttgctcatc taattcatca agcagttctt
     7381 ggtaagtttc agcatcgtga tggaaatgtg gcaaatctaa caagatttca cgccaatcca
     7441 tacccatatt gttattggca tagaccaaat catcgcttgg atagatattc gacatacccg
     7501 gtgcaagaat acggcaagcg tacacaccta aatgctcata atccataata tacacaggct
     7561 gattatgctt gttgaaaatc gccatcatat tattaaattc ttgctccgtt gtgccggaga
     7621 agtcccaatg cacgaacgga taatccgcat cacgtttgaa aagatcccac gaaattagac
     7681 cgcttgaatc aataaagtgt gtctcaaggt tcgcatgatc tgctacatct tcattattaa
     7741 atgaaggtgg ggcaaacaca tctaaatcct ttaagctacg gccttgtaat aactcggtta
     7801 cggtacgttc aaacgccact tggaaattcg ggtgtgcacc aaaagaggca aaacaagtac
     7861 cgttatttgg gtttaacaag atcacacaaa taactggaaa ttctccgcct aatgaagcgt
     7921 catagcataa aatcgggaag tcttcttgct ctagtttctc gatagaggct ttgattgtcg
     7981 gataaccgtc aatcacactt tgcggaattt ccggcaagct gattgcctca gtaataatac
     8041 ggtttttgac aaaacgctcg aacacttcgg ataagccctg cactcgagct tcattttttg
     8101 tgttgcctgc cgacataccg tttgaaacaa acaggttgcc gataatgctt tgcggaatgt
     8161 aaaccgtttc attgtcagat tggcgaacgt aaggtagggt aacaattcca cgatcataat
     8221 ttcctgattg taaatcaacc aataattccg gcgtgatttc accattcgga tcaaaatatt
     8281 cccataaaaa ctcgtccatc atctccattg gtggaatggc ttcatcatca atcggaaacc
     8341 atttttcggt tggataatgc acaaattcac tattagcaat ctcttgacct aaataaaaat
     8401 ccgcccagaa atagttggta gataaacgct caaaatactc acctaatgca gaggcaagag
     8461 cggctttttt gcttgctccc ttaccgttag aaaaacattg cggacagtct gcatcacgaa
     8521 tatgcaccga ccacacattc ggaacaggat ttaaccaaga ggcttcttca atattaaaac
     8581 ctaaggtttt taatttatgc tgaaaggtcg caatgctgtc ttcaagtgca gcatctttac
     8641 cggtaataaa agtttgttct gacatgataa tacctttaac ttgtcgtaaa aatggcaaca
     8701 ttctagcaaa aatccccata gataagtaaa ttttttgtga aatttctgct gaaagaacag
     8761 atttcaaaac ttagaaaaaa tgattacaag cggtcaaatt ttacttgaat tttgcaagtg
     8821 aaatttgtgt ttgatttaga ttaagaaaat attatctagg atatatacag aataaaaggt
     8881 tagaggtagt attgcttgtg ttaggaagga aatattgaag gtataaaaat ggaagaacat
     8941 actattcagt ctttttatgc ccattcgggg aagctttcag atcattcaga ttggcaaact
     9001 ttactcagcc acgccaataa tgttggcttg cttgccgccg aatttgctgc gccgtttgct
     9061 tcacaagaaa ttgctcgctg cacggggcta ttgcacgatt taggcaaata tagtgaacgt
     9121 taccaaaagc gtttacatgg cggagaacgg gtaaatcact ctactgctgg tgcaaaaatt
     9181 gcagtggaac gttgggggcc tttgggcaaa atgatggcgt tttgtatcgc aggccaccac
     9241 gctgggttag caaatggttc tggagaaggg aaaaatcgtt ctacacttac acaacgtttg
     9301 caagagcaat ttggctatgg tcataaagat ctaccggtac ttgacgctat ttggcagcaa
     9361 gaacttaatt tgcctgaaaa attgccctta ccgccgttaa agccttctaa aaacgaacct
     9421 ttcttttctt acgccttttt tatccgaatg ctctattctt gccttgtcga tgccgacttt
     9481 cttgatacag aagcttttta tgccaatctc gaaaaaagac cgcttgaacg aggaaattac
     9541 cccaatttaa ccgcactcca tcagcaattt aatcaattta ttgcacagtt tagggagcga
     9601 attgccactc aaacgcctaa tacgcaggaa gcacaacgta aagcggaagt aaaccgcttg
     9661 cggagtgaaa ttttggatta tgccgtatct caagcaaaac aggaaacagg tctgttttct
     9721 ctgactgtgc caacgggcgg tggtaaaacc tttacttcaa tggcgtttgc ccttgagcat
     9781 gctaaacagt atggtttatg ccgcattatt tatgttattc cgtttaccag cattattgaa
     9841 caaaatgctg cggaatttcg taaagctttt ggcgaattag gaacagaggc ggtattggaa
     9901 catcacagca cttttgatca cgatagccta cctgataaat caagccgaga taagctgaaa
     9961 ttggcatcag aaaattggga tactcctgtt gtggttacaa ctgcagtgca attctttgaa
    10021 agtttgtttg ccgaccgttc ttcacgctgt cgcaaattgc ataatatcgt cggtagcgtg
    10081 attattttgg acgaagccca aatgctaccg ttgaatttat tacgcccaat tatggctgcg
    10141 attgatgaat tagctcgcaa ttatcaatgt tcggtagtgc tttgcacagc gacacaaccc
    10201 gctattcatc aagcgaacgg tttttataaa ggatttgaaa atgtgcgaga aattgcccct
    10261 aatccaaccg cactttttga aaaattgaaa cgtactacgg taaagcatat cggtattcaa
    10321 acagatgtgg agttgcaaag caaactcgca gataacccac aaatgctgat aatcgtgaat
    10381 aaccgccgtc acgcccgagc gttatatgat tcagcgaaac agttagaggg agcttatcac
    10441 ctcaccacgc taatgtgtgc taaacaccgc tcacaaacgc tgactgaaat tcgtcttcgc
    10501 ctaaaacaaa acctaccttg ccgagtgatt gccacttctt taattgaagc cggtgttgat
    10561 gtcgatttcc cactggttat gcgagctgaa gcaggactag attcagtggc tcaagcagca
    10621 gggcgttgca accgagaggg gaaacgttta tctgtagaaa gcaatgtttg ggttttccaa
    10681 cctgaagaac agtggaaagc accaccagag ctaggcttac tttctggctg tatgcgttca
    10741 acggttcagg ttcacgcaga tgatctactt aatccgaaag caatcaatca ttatttccaa
    10801 gcggtttatg aggctaaagg aaaagagctg gataagccaa atattttaaa ggcgtgtcac
    10861 gacgctgggc aaagccttaa tttcccattc caaaaaatag ctgaagattt ccgaatgatc
    10921 acaagccatt taattccggt gattatccct ttcgaccaag aagccgaaaa ccttattgac
    10981 cgtttacgct atgcggatca agtaggcggt attttaagaa aactccagcc ttacactgtg
    11041 caagtaccgg aaaaagcatt agccgaactc tataacgctg gcagagttga aaccattaat
    11101 gaaaccaact tcggcaaaca gttttactgc ttaattggaa tggatttgta tgatgaagtg
    11161 gcggggttga gttgggagaa tgtggatttt cttgagtcgg agaaattggt tttatagatg
    11221 aatgtttatt ttaacttctt tataagttta attttgcata gatatacttt aatataccaa
    11281 atagcctatg acgtctcgta gtaaacagct agtttgtaag aatagatatt tggaagggaa
    11341 acgtaaaatg agagaaccat tattagatga agatgaatta aaaaaatggt tgcaaactat
    11401 ttttactgac aatttggtca ttattgtcgg ttcgggtttg tcctgtgccg aaggtttgcc
    11461 gggaatggga gcattagctg atagattaaa agaacgaatg cctgaatgtc ttgatgatat
    11521 agataaggta acatggaata ccatttctga ttgtctggat tctgaaggct tggaaggtgc
    11581 attgttgaag catcaagcaa atgagacgat agaagccgct attattaaaa taacagccga
    11641 gtatgtactc tccgaagagc aaaaagcgat aaacaaatgt attgctgaga atcagaagct
    11701 caaattttct tatttgcttc cccatatttc agcttcaaat cctaaaattg cccgtgtaat
    11761 tactactaat tatgatagat tgattgagtt tgcggcagag tatgaaaatt ggggaataga
    11821 ttcaatgatg gtcggtcgtt attggggaaa acataatcct gatttgagta ggaaattgca
    11881 gataagagac attagagtaa aaggtaaatg tccaaaattg
//
LOCUS       DANLTI010000084        11828 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.084, whole genome shotgun sequence.
ACCESSION   DANLTI010000084 DANLTI010000000
VERSION     DANLTI010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11828
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.084"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            133..1110
                     /locus_tag="PXB09_001807"
     CDS             133..1110
                     /locus_tag="PXB09_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5233898.1"
                     /translation="MSRNLFQKRLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQ
                     DYRTTINDHERHVLTRAMLAISQVEVNVKRFWGELYCYFPKPEMDDVGGTFAESEVRH
                     KDAYSFLLEKLGLNEMFSQIHEIEPLMNRIRYMESFMKDKDAGKGEFVLSLVLFSLFV
                     EHISLFGQFIIMMSFNKHKNLFKGISNAVEATSKEEEIHGKFGIALYEILRDEHSELF
                     TPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITKATVENYIKNRYNNSLSILGLE
                     PPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSKKMKQITADDLF"
     gene            1097..2764
                     /locus_tag="PXB09_001808"
     CDS             1097..2764
                     /locus_tag="PXB09_001808"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5233899.1"
                     /translation="MTYFNTDRPDFHWLNEDSRLFLQRGYLLEGTTALDRIRFIAEHA
                     ERKLGIEGYADKFYHYMARGYFSLSSPIWSNFGLDRGLPISCFGSYIGDSIHEIMVTT
                     AEVGMMSKIGGGTSAYFGDIRPRGSLIKNNGKSDGSFNFSKLFDTVIDVISQGTSRKG
                     QFAGYIDIEHGDIDEWLDIHTEGNPIQLMYYGVCVGHDWLESMKAGDPYKRQLWAKLL
                     QRKTETGIPYLFFKDNANAGRPDVYKDKNMTIHASNLCTEIMLPSSNEESFVCCLSSM
                     NLLYFDEWKDTDAPETLTYFLDVVMSEFIEKSQSIPFLDRANRFARRHRALGLGVLGW
                     HSYLQANNIAFDSFQAMQKNNEIFKTLQAKTLKASQELAQRFGEPEILEGYGRRNTTL
                     MSIAPTKSSSFILGSVSPSVEPFKSNYYVKDLAKIKTVYKNPFLEKLLQEKGLDTEEI
                     WTSILQNDGSVQHLEQLSEHEKEVFKTFAEISQLSVIQQAAQRQKYIDQGQSINVMIH
                     PATPARDLNQLYLTAEELGLKSIYYQNSMSAAQVFNRNLLSCSSCEG"
     gene            2768..3187
                     /locus_tag="PXB09_001809"
     CDS             2768..3187
                     /locus_tag="PXB09_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233900.1"
                     /translation="MGNLSHTSPNTIVEVVGEFPEITSSGYTFDKGPIQLRIGKHTAP
                     NKGFGVKHIEAEHMQEILNLGFTSVNEFVKAIIVENAKIFCEFSDLKGNHRPIILKAS
                     IGIVVLERKFLESGTIYSVVTAYRRTNPHGIQIGTMK"
     gene            complement(3422..4183)
                     /gene="nudC"
                     /locus_tag="PXB09_001810"
     CDS             complement(3422..4183)
                     /gene="nudC"
                     /locus_tag="PXB09_001810"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDL5233901.1"
                     /translation="MNKGYWIIVSDFDIALEAGEIPFGSAEELGLSGREKLTIGQYQG
                     SPAYLVKALESDNQREFAYLRSQINRPPELSHLLHRAVSLNHFFQTHQFCGKCGEKTI
                     LASDEIAIYCNACGNRAYPTISPSIIVAVRKGRQILLANHLRHKGTIYTTLAGFVEAG
                     EAVETAVHREVFEETGIKVKNVRYFGSQPWAFPNSLMLGFLADYESGEIQLQEEEICD
                     AKWFDCEESLPEIPQQGTIAFELIQATLKLCRESK"
     gene            complement(4176..4859)
                     /locus_tag="PXB09_001811"
     CDS             complement(4176..4859)
                     /locus_tag="PXB09_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDL5233902.1"
                     /translation="MKQPTFKRMTNKRSNFAKNLQKNPQKRPLTFAETTLVLLNKPYD
                     VLTQFTDEQGRKTLKDFITMPNIYPVGRLDRDSEGLLLLTNNGEIQHRLAHPKFDKQK
                     TYWVQVEGVPQPEDLAKLAKGVELKDGLTKPAKVRAIATPDFAWNIAPQIRERKTIPT
                     SWIELIISEGKNRQVRRMTAHIGFPTLRLIRVGIGQFRLGNLGCGEFQVLSENEKRKL
                     FTQLGLKDE"
     gene            complement(4856..5704)
                     /locus_tag="PXB09_001812"
     CDS             complement(4856..5704)
                     /locus_tag="PXB09_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5233903.1"
                     /translation="MEKRTLALLKVHGTAVLFGASGIFGALIQSSAETIVLGRVMIAF
                     AIISLYFLWKKQPLVKLNLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASF
                     PAFVALFESLFFREKLRFREVVLLIAITVGLILVTPEFTFGNQATQGLLWGVLSALVY
                     GILAVANRRTMSKISGVQASWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCT
                     TLAYTLFISSLDTINARTASMIISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA
                     WANLKK"
     gene            complement(5704..6189)
                     /locus_tag="PXB09_001813"
     CDS             complement(5704..6189)
                     /locus_tag="PXB09_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDL5233904.1"
                     /translation="MPILAILFGIFFYIYCEISLLVNIGSIIGVLPTILLLVVISFLG
                     LWIVKLRGVYTLFSIKQDLSQGKIPTEAVGNSVMFIVAGILLIIPGFLSDILAILCVL
                     PFSRKWIQAFVINSVKNKVFMHFTAQTSSFSVTSAQDSNTFDAEFERKPDEQDQHNRI
                     K"
     gene            complement(6191..7513)
                     /gene="pepQ"
                     /locus_tag="PXB09_001814"
     CDS             complement(6191..7513)
                     /gene="pepQ"
                     /locus_tag="PXB09_001814"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDL5233905.1"
                     /translation="MKNLFSTHLARLQQTVQSLLENAFLDGLWIYAGKAKTLFLDDQT
                     APFKINPYFNYFFPYPQAENCWLFLDGKNKPKIYFYAPEDYWVSTLKVPTEAFFAAEF
                     EWVLLRAENEIATFIQNPTACAFIGEDVELAKKLGFSHINPQKVLNSLNFARSIKTEF
                     EIESIYQAQFSALKGHQVAKEAFFAGKSEFEINLEYLKATQQSDLNVPYGNIVAINQN
                     GAVLHYTALDFDTHAKRHSFLIDAGTTVNGYASDLTRTYAFDSGSEFAELVAKMEQLK
                     LQIIAELSIGVNYLHYHTRMQQMISQLLAEHQFIHLSAEQIFEQGISRTFFPHGLGHL
                     LGIQVHDVGGFQQNARGSHKAPPEVYPSLRCTRELQENMVLTIEPGFYFIEMLLKPWK
                     NSALSSAFNWQKIEAFKAFGGIRTEDNIVMRANGAENLTANAAATLGG"
     gene            7524..7766
                     /gene="tusA"
                     /locus_tag="PXB09_001815"
     CDS             7524..7766
                     /gene="tusA"
                     /locus_tag="PXB09_001815"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDL5233906.1"
                     /translation="MTQLTVNKELDTLGLRCPEPVMLTRKTIRNMEEGEILHIIADDP
                     ATTRDIPSFCEFMDHQLIQKEVDSTPYHYWIKKGLE"
     gene            complement(7833..8264)
                     /gene="rraB"
                     /locus_tag="PXB09_001816"
     CDS             complement(7833..8264)
                     /gene="rraB"
                     /locus_tag="PXB09_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDL5233907.1"
                     /translation="MYNLDELRTETDETISSLLADGSDPEALYIIEHHVAHHDFDKLE
                     KLVVDAYKLGYEISEAEEVEDENGKVIFVCDIVSEIHLNADLITAQQKELLPLIEKAG
                     AEYEGWGTYFEDPNADEDEYGDDGEFFDDENDDFEDEPRRH"
     gene            complement(8279..8890)
                     /locus_tag="PXB09_001817"
     CDS             complement(8279..8890)
                     /locus_tag="PXB09_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDL5233908.1"
                     /translation="MKLNYHKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNA
                     LTNQKSLARTSKTPGRTQLINLFKVETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYL
                     QKRECLGGVVILMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKM
                     VREAILPFQGDIQVEAYSALNKIGIDKLSNKLDSWFAPKLITE"
     gene            complement(8892..9308)
                     /locus_tag="PXB09_001818"
     CDS             complement(8892..9308)
                     /locus_tag="PXB09_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDL5233909.1"
                     /translation="MSWYKALFSFNGRLNRRGFWIGFGIHFLFLFMVAMWINLAELSL
                     LSVLPLIITGFSLSAIIIKRLHDRNRSAKALLMALVPIICYLAAPYSQGIMQILLGQV
                     MPAFIGMLLFLEWGVFAGNPEPNQYGEQGLSFKFRE"
     gene            complement(9312..10142)
                     /locus_tag="PXB09_001819"
     CDS             complement(9312..10142)
                     /locus_tag="PXB09_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDL5233910.1"
                     /translation="MFEYFLSLSPIWQAFLAGLFTWGCTIFGSSFVYFFKSVNRKLLD
                     SMMGFAAGVMIAASFWSLLAPSLEYAEADYGSLAWLPAAIGFLAGGAFIRLIDYVVPH
                     LHLSKPIEQAEGNDQLKQGLSKSTLLFLAITIHNIPEGLAIGVAFGALATQVSGVDAS
                     IMGAIGLAIGIGLQNIPEGSSLVLPIRGEGHSRKKAFWYGSMSAVVEPIAAVIGAVFV
                     LSMTAILPYALAFAAGAMIFVVVEELIPESQSSGNTDIATLSLMLGFVVMMVLDVALG
                     "
     gene            complement(10479..10594)
                     /gene="rrf"
                     /locus_tag="PXB09_001820"
     rRNA            complement(10479..10594)
                     /gene="rrf"
                     /locus_tag="PXB09_001820"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(10756..>11828)
                     /locus_tag="PXB09_001821"
     rRNA            complement(10756..>11828)
                     /locus_tag="PXB09_001821"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         3573 a         2658 c         2263 g         3334 t
ORIGIN      
        1 tttttcttta taaatcaata agctaccaaa gaccaataaa aaagagtgtt tgtcaagact
       61 tgtcttgaaa ctttttttgc atacaatcat ctaccagttc caaacataaa ctttaagata
      121 gagcctacga atatgtctag aaacctcttc caaaaacgct taaatattaa gccgtatgag
      181 tatcctgagc ttcttgaatt taaagatgca attcgccatt cttactggtt acacaccgaa
      241 tttaacttca ccggcgatat tcaagactat cgcaccacca ttaacgatca cgaacgtcac
      301 gtgttaaccc gagcaatgct tgcgatttca caagtagaag tgaatgtaaa acgtttctgg
      361 ggcgagctat actgctattt cccaaaaccg gagatggacg atgtaggcgg tacttttgct
      421 gaaagtgaag ttcgccataa agatgcttac tcgttcctat tggaaaaatt aggcctaaat
      481 gaaatgttca gtcaaattca tgaaattgaa ccattaatga accgcattcg ttatatggaa
      541 agttttatga aagataaaga tgctggcaaa ggcgaatttg ttttatcgtt agtgctgttc
      601 tctttatttg ttgagcatat ttcattgttt ggacagttta ttatcatgat gtcgttcaac
      661 aagcataaaa acctgtttaa agggatttcc aatgcggttg aagccacctc aaaagaggaa
      721 gaaattcacg gtaaattcgg aattgcgtta tacgaaattt tacgtgacga acacagtgaa
      781 ctattcacac cagaattttt tgaagatttg caaaccttgg caaatcaagc gtttgaagca
      841 gaacgtggca tcttagactg gattttcgaa gaaggtgatt taagctttat caccaaagcg
      901 acggtagaaa attacattaa aaaccgttac aacaattctt taagcatttt agggttagag
      961 ccgccacacg acatcgaccc tgaattatta aaagagactg agtggtttga tattgaaatt
     1021 ctttcaacca aagaaaccga tttctttaac aaacgtagca ccgattattc taaaaaaatg
     1081 aaacagatta ccgcagatga cttattttaa tacagaccgc ccggacttcc actggcttaa
     1141 tgaagacagc cgtttattct tacaacgtgg ctatttattg gaaggaacaa ccgcattaga
     1201 ccgcattcgt tttattgccg aacacgcaga gcgaaaactc ggcattgaag gctatgccga
     1261 taaattctat cactatatgg caagaggcta cttctcgctt tcttcgccaa tttggtcaaa
     1321 ctttggctta gatcgtggct taccgatttc ttgtttcggt agctacatcg gcgactctat
     1381 ccatgaaatt atggtgacta ccgctgaagt gggcatgatg agtaaaattg gcggtggtac
     1441 ttcggcctac tttggcgata ttcgtccgcg tggctcgtta attaaaaaca acggtaaatc
     1501 agacggctca tttaacttca gtaaattatt tgacactgtg attgacgtga tttcacaagg
     1561 aacatcacgc aaaggtcagt ttgccggtta tattgatatt gagcacggcg atattgacga
     1621 atggctggat attcacaccg aaggcaaccc aattcaatta atgtattacg gtgtgtgtgt
     1681 cggtcacgat tggttagagt caatgaaagc cggcgatcca tacaaacgtc agctttgggc
     1741 aaaattgtta caacgtaaaa ccgaaaccgg tatcccttat ttattcttta aagacaatgc
     1801 caacgcaggt cgtcctgatg tatataaaga taaaaatatg acgattcacg cctctaactt
     1861 atgtactgaa attatgttgc cttccagcaa cgaagaaagt ttcgtatgct gtttatcgtc
     1921 tatgaaccta ctctactttg atgagtggaa agataccgat gcaccagaaa cattaaccta
     1981 tttcctcgat gttgtaatga gtgaatttat tgagaaaagt caatcaattc cattcttaga
     2041 ccgtgcaaac cgctttgccc gtcgccatcg tgcattaggt ttaggcgtgt tgggctggca
     2101 cagctatcta caggcaaata atattgcctt tgacagcttc caagcgatgc aaaaaaacaa
     2161 cgagattttc aaaacgcttc aagcaaaaac cttgaaagcc tcgcaagaat tggctcaacg
     2221 cttcggcgag ccggaaattt tagagggcta tggtcgccgt aatactacat taatgagtat
     2281 tgctccgact aaatccagta gctttatttt aggcagtgtg tcgccatcgg tagagccgtt
     2341 taaatccaac tactatgtaa aagatttagc gaagatcaaa accgtgtata aaaacccgtt
     2401 cttagagaaa ttactccaag aaaaagggct agacaccgaa gaaatttgga cgtctatttt
     2461 acaaaatgat ggctcggttc agcatttgga acagctttcc gagcacgaaa aagaagtatt
     2521 taaaaccttt gccgaaatca gccaattaag cgtgattcag caagctgctc aacgtcaaaa
     2581 atatattgac caagggcaaa gtattaatgt gatgatccac ccagccacac cggctcgtga
     2641 tcttaaccaa ttatacttaa cagcagaaga gctgggctta aaatccatct actaccaaaa
     2701 ctcaatgagt gcagcacagg tatttaaccg taacctatta agctgctcaa gttgcgaagg
     2761 gtaaataatg ggaaatttat cgcatacttc acctaatact attgttgaag ttgttggtga
     2821 atttcctgaa ataacatcta gtgggtatac ctttgataaa ggtcctattc aattaagaat
     2881 cggcaaacat actgctccaa ataaaggctt tggtgtaaag catattgaag ccgagcatat
     2941 gcaagaaatt cttaatctag gatttacatc agttaatgaa tttgtcaaag ctatcatagt
     3001 agaaaacgct aaaatttttt gcgaattctc agatttaaaa ggcaatcatc gccctattat
     3061 tctgaaagca agtattggca ttgtggttct agagcgtaag tttttggaaa gcggtacgat
     3121 atattcagtt gtaaccgctt atagaagaac aaatcctcac ggaatacaaa taggcactat
     3181 gaaataaagt acgttagtgt tataatcagt tccacgcaag agcatttgta gaaaataaca
     3241 ggcggatttg gttttctact gtgggcggca ggtttccgct aacctgtaat agctatttaa
     3301 tttttatatt aaatcctgaa cttgaaacag actaagggat tgctgcggta gctaagaata
     3361 caaacctctc tataatcata tagagaggtt ttttcttatt gatgagcaca agttaagata
     3421 attatttact ctcccgacat aacttcaagg tagcttgaat cagctcaaaa gctattgtgc
     3481 cttgttgtgg gatttcaggt aagctttcct cacagtcgaa ccattttgca tcgcagattt
     3541 cttcttcctg tagctgaatt tcaccgcttt cataatccgc taaaaaacct agcattaatg
     3601 aattgggaaa cgcccaaggt tggcttccaa aataacgcac atttttcact ttaatgcccg
     3661 tttcttcaaa cacttcacga tgcaccgcag tttctaccgc ctcaccggct tcgacaaaac
     3721 cggctaaagt ggtataaatt gtgcctttat ggcgtagatg attggctagt aggatttgtc
     3781 tgccttttcg caccgccaca ataattgacg ggctaatcgt tgggtaagct cgattgccac
     3841 acgcattgca gtaaattgca atttcatcgc ttgccagtat ggttttctcg ccacattttc
     3901 cgcaaaattg gtgagtctga aagaaatggt taagcgaaac agctcgatgc aacaaatgag
     3961 acagttcggg tggtcggtta atttggcttc ttaaataagc aaactctcgc tgattatccg
     4021 attctaacgc cttcaccaaa taagccggcg agccttgata ttgcccgatg gttaatttct
     4081 cacgtccact taagcccagc tcttccgcac ttccgaatgg aatttcccca gcctccaagg
     4141 caatatcaaa atcgctgacg ataatccaat atcctttatt catctttcaa tcctaattgt
     4201 gtaaacaact tacgtttttc attttcagat agcacttgaa actcaccaca gcctaaattg
     4261 cctaatctaa actggcctat cccaacacga attaaccgta aagtcgggaa accgatatgt
     4321 gcagtcattc ttctgacttg gcgatttttc ccttcagaaa taatcaattc tatccagctg
     4381 gtcggaatgg ttttccgctc acgaatttgc ggggcgatat tccaagcaaa atcgggcgtt
     4441 gctattgctc tgactttcgc gggcttggtc aaaccatctt ttaactccac cccttttgct
     4501 aatttggcaa gatcttccgg ttgtggaaca ccctccactt gtacccaata ggttttctgc
     4561 ttgtcaaatt tcgggtgagc taaacggtgc tggatttcgc cattattagt caaaagcaac
     4621 aatccttcac tgtctctatc tagccgcccg accgggtaaa tattgggcat cgtaataaaa
     4681 tcttttagcg tttttcgccc ctgttcatcg gtaaattggg ttagtacatc ataaggctta
     4741 ttgagtaaca caagggtggt ttccgcaaag gtaagcggtc gtttttgcgg atttttttgc
     4801 aaatttttag cgaaatttga ccgcttgttt gtcattcttt taaaggttgg ttgtttcatt
     4861 ttttcaggtt cgcccacgca acagaaagta aaataattaa gccaccgata atcattttaa
     4921 gggttggcac ttcattaaag caaagccacg cgatcacaat cgcatacacc ggctcgaggg
     4981 aaataatcat tgaggcagta cgggcgttga tggtatcaag gcttgaaata aacagcgtat
     5041 aggcaagggt tgtacataaa aaaccgatac agaaaatcca aaaccaatct tgggtggaaa
     5101 cgcttggaaa ttcagtgatg gagagaggca acagaaaaag tgtagcaaaa atatactgcc
     5161 accagcttgc ttgcacaccg gaaattttgc tcatggtacg gcgattcgct accgccaaaa
     5221 taccatacac caaagcagat aacacgcccc acaataaacc ttgagtggct tgattaccaa
     5281 aagtaaattc aggggtaact aaaattaaac caaccgtgat ggcaattaat agcaccactt
     5341 cacgaaagcg taatttttca cggaagaaca ggctttcaaa taacgccaca aatgccggaa
     5401 agctggcaaa gcctaaggtt gctaccgcca caccacctac tttaaccgcc acaaaaaaag
     5461 taacccagtg ggcagctaat aaagctgcag aaaatgcaag ttgagccatt tgctgtaagt
     5521 tgagctttac aagcggttgt tttttccata aaaaatacaa agagatgata gcaaaagcaa
     5581 tcatcactcg cccaagcaca atggtttcag ccgagctttg aattaatgct ccgaagatcc
     5641 ccgaggcacc aaataaaacc gctgtgccgt gtactttaag tagtgcaagt gttcttttct
     5701 ccactatttg atcctattat gttgatcttg ctcgtccggc ttgcgttcaa attctgcatc
     5761 aaacgtgttg ctatcttgcg cagatgtaac agaaaaagac gaagtttggg cggtaaaatg
     5821 cataaacacc ttattcttta cgctattaat tacgaaggct tgaatccatt ttcggctaaa
     5881 gggtaacacg cataaaatcg ctaaaatatc acttaaaaag ccgggaataa tcagcaaaat
     5941 gccggctaca ataaacatca ccgagttgcc gactgcttca gtcggtatct tgccttggct
     6001 taaatcttgc ttgatggaaa agagggtata aacgcccctt aacttcacaa tccataaccc
     6061 taaaaatgaa atcacgacca gtaacaaaat cgtgggtaac acgccaatga tcgagccaat
     6121 attcaccagc agcgaaattt cgcaatagat ataaaagaaa ataccaaaca gaatcgctaa
     6181 aataggcata ttatcctccc aacgttgcgg cagcgtttgc cgtcagattt tctgccccat
     6241 tggctcgcat gacaatattg tcttcggtac gaatcccgcc aaaggctttg aaagcctcaa
     6301 ttttctgcca gttaaaggca gaagataagg cactgttttt ccaaggctta agtagcatct
     6361 caataaaata aaaacccggc tcaatggtaa gcaccatatt ttcctgtagc tcacgggtac
     6421 aacgcaaact tgggtaaacc tctggaggag ctttatggct gcctcgggca ttttgctgaa
     6481 aaccgcccac atcgtgcact tgaataccca ataaatgccc tagtccgtgt gggaagaacg
     6541 tacggctaat cccttgttca aaaatttgct cggctgaaag atgaataaat tgatgttccg
     6601 ctaataattg cgaaatcatc tgctgcattc gggtgtgata atgcaggtag ttcaccccaa
     6661 tactcagctc agcaataatc tgcaacttca actgttccat tttcgccacc agctcggcaa
     6721 attcagaacc gctgtcaaag gcataggtgc gggtgagatc ggaggcataa ccatttaccg
     6781 ttgtgccggc atcaattaaa aaactgtggc gttttgcgtg ggtgtcaaaa tctaacgccg
     6841 tataatgtag caccgcacca ttttgattaa tcgccacaat attgccataa ggaacattga
     6901 gatcagattg ctgcgtcgct ttcaaatatt caaggttgat ttcaaattcg cttttgccgg
     6961 caaaaaatgc ctcttttgct acttgatgcc cttttaaggc tgaaaattgg gcttggtaaa
     7021 tactttcaat ttcaaactcc gttttgatgg agcgggcaaa attcaggcta ttcagcactt
     7081 tctgcggatt aatatggcta aagcctaact ttttggctag ctcaacatct tcaccgataa
     7141 aggcacaagc ggtcggattt tggataaagg ttgcaatttc attctctgct ctcaacaaaa
     7201 cccactcaaa ttccgcagcg aaaaaggcct ccgttggcac ttttagagtg gaaacccaat
     7261 aatcttcagg ggcataaaaa tagattttcg gcttattttt gccatctaaa aataaccagc
     7321 aattttcagc ttggggatat gggaaaaagt aattaaaata agggttaatt ttaaacgggg
     7381 cggtttgatc gtctaaaaat aaggtttttg ccttgccggc ataaatccat aaaccgtcta
     7441 aaaaggcatt ttccagcaag ctttgcactg tctgttgcaa acgtgcgaga tgcgtagaga
     7501 atagattttt cataaggaat aaaatgactc aattaactgt aaataaagaa ttagatacct
     7561 tggggctacg ttgcccagag ccggtgatgc tcacccgtaa aacaatccgt aatatggaag
     7621 agggagaaat tttgcatatc atcgccgatg acccggccac tacccgtgat attccgagtt
     7681 tctgcgaatt tatggatcac caattaattc aaaaagaggt ggactccacc ccataccatt
     7741 actggattaa aaaaggcttg gaataaacca caagcggtcg attttagcca taaaattgca
     7801 aatttatgca caaaatcgac cgcttgtttt aattaatgac ggcgaggttc gtcctcaaaa
     7861 tcgtcatttt catcatcgaa aaattcaccg tcatcgccgt actcatcttc atcagcattc
     7921 ggatcttcaa agtaggttcc ccagccctca tactccgcac cggctttttc aattaatggc
     7981 agtaactctt tttgttgtgc ggtaatgaga tccgcattca agtgaatttc gctcacaatg
     8041 tcgcatacaa aaatcacttt accattttcg tcttccactt cttccgcttc ggaaatttca
     8101 tagcccagct tataggcatc aactactaat ttttccaatt tatcaaaatc gtggtgagca
     8161 acgtggtgtt caataatata aagggcttca gggtctgaac catcggctaa taatgatgaa
     8221 atggtttcat cggtttctgt gcgtaattca tcgagattgt acatattgaa ttccttactt
     8281 attctgtgat taattttggt gcaaaccagc tatctaattt gttcgacagc ttatcaatac
     8341 cgattttatt cagtgcggaa taagcctcta cttggatatc accttggaat ggtaaaatcg
     8401 cttctcttac catttttacc tgcttagagc gtgccgattg gcttaactta tccgctttgg
     8461 tcaacagcag taacaccggc aagttggctg acactgccca ttcaatcatc tgttgatcta
     8521 aatctttcaa cgggtggcga atatccatta aaatcaccac accgcctaaa cattcacgct
     8581 tttgtaaata ctcgcctaat gctttttgcc actggatttt catctgttca ggtactgctg
     8641 catagccata gccaggtaaa tccactaatt tacaattcgt ttcaacctta aacaagttaa
     8701 tcaactgcgt tcgccccggt gttttggaag ttcgggctaa acttttttgg ttagttaaag
     8761 cgttcaaagc agtcgattta ccggcatttg aacgcccggc aaaagcaatc tccacacctg
     8821 tatcttcagg taaatgacga atatccggtg ctgaagttaa aaaatgggtt ttatgatagt
     8881 ttaatttcat tttattctct aaatttaaaa gataagcctt gctcgccata ttgattcggt
     8941 tcaggattac cggcaaatac accccattct aaaaagagca acattccaat aaatgccggc
     9001 atcacctgtc caagcaatat ctgcataatt ccttgtgaat aaggagctgc aagataacaa
     9061 ataatcggca ctaatgccat taacagggct tttgccgaac gatttcggtc gtgtaatcgt
     9121 ttaataataa tagcagacag gctaaatcct gtaattataa gcggtagcac actcaataaa
     9181 gacaattcag ccaaatttat ccacatagca accataaaca ggaaaagaaa gtggattcca
     9241 aatccaatcc aaaaacctcg tctatttagc ctaccgttaa aactaaaaag tgctttatac
     9301 caactcattt tctaccctaa agctacatca agtaccatca ttactacaaa gcctaacatc
     9361 aggcttaaag tcgcaatatc agtatttccc gaactttgcg attccggaat cagttcttct
     9421 acgaccacaa aaatcatcgc tccggcagca aaggcaagag cataaggtaa aatagccgtc
     9481 atcgacagca caaaaaccgc cccaatcacc gccgcaatag gctcaaccac tgctgacata
     9541 gagccatacc aaaatgcttt cttccgacta tgcccttcgc ctcgaattgg caatacaagt
     9601 gacgagcctt cgggaatgtt ttgtaaccct attccgattg ccaaaccgat agctcccata
     9661 atggaagcat ctacgcctga aacttgggtt gccaaagcac cgaaagccac ccctatggct
     9721 aatccttctg gaatattatg aatggtaatc gcaagaaaaa gcaaagtaga ttttgataag
     9781 ccttgtttaa gttgatcatt tccttcagct tgctcaatcg gcttactcaa gtgcaaatgc
     9841 ggcacaacat agtcaattaa tcgaataaaa gctccaccgg caagaaagcc aatcgctgca
     9901 ggcagccaag ctaaagagcc ataatccgcc tcggcatatt ctaaagaagg tgcaagcaaa
     9961 gaccaaaacg aggctgcaat cattacacct gcggcaaagc ccatcatact gtctaataat
    10021 tttcgattaa ccgatttaaa aaaatagaca aatgacgaac cgaaaatcgt acaaccccaa
    10081 gtaaataaac ccgctaaaaa agcttgccat attggagaaa gtgaaaggaa atattcaaac
    10141 aagaaatagt accagctaaa ataaatattg gctcattcta tcaaagattc agggttatta
    10201 atatagtgta gccaaaggct caacgaagat ttcacttgta aaacttagca agaaaataac
    10261 cgcttgcatt tccctttcat aaatacaatg aaaatcctaa caagcggtca ttttccgtga
    10321 gttttttacc tttaccacaa caacaaaaaa ccgcctgtat ctctacaggc ggctctttct
    10381 tggattactt gtactttgtt tatttgtact tattttgctt ttgcttaagt tttcgctttt
    10441 gtaactttta gctttcgctt aagctcgctt aaattaaaac ccgacgatgc tctactctca
    10501 catggcgaat caccacacta ccatcgacgt tactgcgttt tacttctgag ttcggtatgg
    10561 ggtcaggtag gaccacagca ctcttgtcgt cgggaaaatt cttttctatt tttgaatttc
    10621 tttaagttaa cttcctaatc taactcttag ttcactttaa tagttagatt aacttcctta
    10681 acttcgattg atttcttctc tagtttcgtt cttcttctca atacaaaaac aagcctaaaa
    10741 acatttgagc gttgtatagt taagcctctc gggcaattag tactggttag ctcaatgtct
    10801 cacaacactt acacacccag cctatctacg tcgtagtctc caacaaccct tacacactta
    10861 tagtgtggga gaactcatct cgaggcaagt ttcgtgctta gatgctttca gcacttatct
    10921 cttccgcatg tagctaccca gcaatgcctc tggcgagaca actggaacac cagtgatgcg
    10981 tccactccgg tcctctcgta ctaggagcag cccctctcaa ttctccaacg cccacggcag
    11041 atagggaccg aactgtctca cgacgttcta aacccagctc gcgtaccact ttaaatggcg
    11101 aacagccata cccttgggac ctacttcagc cccaggatgt gatgagccga catcgaggtg
    11161 ccaaacaccg ccgtcgatat gaactcttgg gcggtatcag cctgttatcc ccggagtacc
    11221 ttttatccgt tgagcgatgg cccttccatt cagaaccacc ggatcactat gacctgcttt
    11281 cgcacctgct cgacttgtct gtctcgcagt taagcttgct tataccattg cactaacctc
    11341 acgatgtccg accgtgatta gcaaaccttc gtgctcctcc gttactcttt gggaggagac
    11401 cgccccagtc aaactaccca ccagacactg tccgagaccg cgttccgcaa tcttcgttag
    11461 aacatcaaac gttaaagggt ggtatttcaa ggacgcctcc acaatcactg gcgtgactgc
    11521 ttcaaaggct cccacctatc ctacacatca aaattcaatg ttcagtgtca agctatagta
    11581 aaggttcacg gggtctttcc gtctagccgc gggtacaccg catcttcacg gcgatttcaa
    11641 tttcactgag tctcgggtgg agacagcctg gccatcatta tgccattcgt gcaggtcgga
    11701 acttacccga caaggaattt cgctacctta ggaccgttat agttacggcc gccgtttact
    11761 ggggcttcga tcaggagctt ctcttgcgat aacaccatca attaaccttc cagcaccggg
    11821 caggcatc
//
LOCUS       DANLTI010000085        11824 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.085, whole genome shotgun sequence.
ACCESSION   DANLTI010000085 DANLTI010000000
VERSION     DANLTI010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11824
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.085"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..208)
                     /locus_tag="PXB09_001822"
     CDS             complement(<1..208)
                     /locus_tag="PXB09_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233911.1"
                     /translation="MSSIKEIFSTKNSPINVLMQTEWFLGFILIVVYLDAYFQLVHQV
                     PIYIAIQQKEIYLTKTIDYIAAIFF"
     gene            complement(278..1411)
                     /locus_tag="PXB09_001823"
     CDS             complement(278..1411)
                     /locus_tag="PXB09_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5233912.1"
                     /translation="MKTIKIGLVGTGYIGRCHAIAYAQAPTLFPLKGKIQLEYLAEIN
                     QALADQKAREFGFQRATDDWRKLVTDPNVDVVDICTPNFLHKEIALEAIKHGKHVYSE
                     KPLALTAQDAKEMVIAAQQAGVKTLVGFNYIKNPTTQLARQIIQNGEIGEVVHFYGTH
                     NEDYLANPNTPIDWHCYKAKAGLGTLGDLAAHIVSIAHYLVGSDIERVIGDMQTVIEE
                     RPSPHNPAEKIKVENEDQASSLIRFANGVMGTLESSRISCGRKMGLTYVVTGTKGTLS
                     YTQERMAELKLYLHDDDKSRQGFKTILVGPEHPDYAAFCVSAGHGIGFNDQKAVEIRD
                     LINGIAADDPMYPDFEEGYKISRVLEAIAKSAEEKRWVEVSEI"
     gene            complement(1542..2570)
                     /locus_tag="PXB09_001824"
     CDS             complement(1542..2570)
                     /locus_tag="PXB09_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5233913.1"
                     /translation="MTTQFLKNMGMVDDKGKIDFIAFFERFGVLIFLILLIIFFTSQN
                     GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAGIDLSVGSILAVTAMFAAYIIKGDN
                     TVTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGLT
                     LVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFALHKTRWGRYVYSVG
                     GNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIASV
                     VIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAYYQQIIMGLIIILAVAFDTY
                     AKSRRGAL"
     gene            complement(2582..4126)
                     /locus_tag="PXB09_001825"
     CDS             complement(2582..4126)
                     /locus_tag="PXB09_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5233914.1"
                     /translation="MSTPLLEVKDLTKSFSGVMALNGVKLTVGKGEVHALLGENGAGK
                     STLLKALSGAQPQTSGEIIFNGETLSLSDSPFDRQLKGIVTIYQEFNLLPNMTVAENF
                     FLGREPVKGLFVNEKAVNEEAQLVLDNLGLNIKPDTQVSRLSVAQQQMVEIARAMTLN
                     AKLIIMDEPSAALSDKEVETLHQIVRDLKSRGISVIYVTHRLNEVFALCDRFTVFQDG
                     RYSGEGEVKNVNVDQIIKMMVGREVAFTRRPPEETHHTHRPIRLAVKNLHREKPAFDP
                     HGIALHGVSFNIHEGEVLGIAGLVGAGRTEIARCLFGVENYTADEISLDGKPYAATSP
                     LDALEKGVALVPEDRKKEGLVLGLPIKTNMTLPILSKLLKGNLFVDNQKEDDLIETYR
                     QALRIKMASSELEARKLSGGNQQKVILARCMALNPKVLIVDEPTRGIDVGAKSEVHQV
                     LFDMAKQGVAVLVISSDLPEIMAISDRIITLSEGRVTGEIHGDDATEEKLMSMMAVGV
                     QRKAAA"
     gene            complement(4177..5115)
                     /locus_tag="PXB09_001826"
     CDS             complement(4177..5115)
                     /locus_tag="PXB09_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDL5233915.1"
                     /translation="MKKRIKFVLSALTLGLAMNSFAKDELVVFSLPNLSSPFEVQLQK
                     VAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGIIISPNDVNAISGAVEEII
                     KEKIPAATLDRKVESSKPVPHFGANNYTGGQEVAKAVKAKYPNGAKIILLTGQPGSTS
                     NIERTKGIRDELAAGGDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKPEVIISANDD
                     MALGAIEALRSQGLKAGDILVTGFDSTPEALARVKDGWLYLTADQRPSFAVSTALEQV
                     VGNIRESKEVSGADYPPKIILKDNLQEAERFAEISE"
     gene            complement(5447..6958)
                     /locus_tag="PXB09_001827"
     CDS             complement(5447..6958)
                     /locus_tag="PXB09_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5233916.1"
                     /translation="MSQFVQNFINGAVVESQSQRVTSVFNPATGEETKKVKLSLPNEV
                     DAAIAAADQAFKSWSQQSPLRRARILFKFKELLEANFDELARLISSEHGKIYSDAIGE
                     LTRGLEVVEFATGIPHLQKGEFSANAGRGIDIHSIQQPLGVVAGITPFNFPAMVPMWM
                     FPVALACGNTFVLKPSEKDPSVSIRLAELLKEAGLPDGVFNVVQGDKEAVDILLTDSR
                     IQAVSFVGSTAIAQYIYEKGSANGKRVQALGGAKNHALIMPDADVQGTINALLGAAFG
                     AAGERCMALSVAVVVGDELADKIIEELIPKVKALKIGSGLLPQGVLENDMGPVISKEH
                     KAKIESYIDQGVAQGAKLCVDGRGYKVEGFENGYFVGGTLFDNVTPEMTIWQDEIFGP
                     VLSVVRVKDYAEGIALINSHQYGNGSAIFTADGDSARQFTQDVQAGMVGVNIPIPVPM
                     AFHCFGGWKASIFGPLNVYGTDGVRFYTRMKTITTRWPDSSVRSQAAFNFPTL"
     gene            7177..8001
                     /gene="iolB"
                     /locus_tag="PXB09_001828"
     CDS             7177..8001
                     /gene="iolB"
                     /locus_tag="PXB09_001828"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HDL5233917.1"
                     /translation="MSSPLLSKPNFNQHEGLIQHITPENAQWEYVGFDVYQLSKQQIT
                     LESGENELCLVFVTGFGSVYVDDYAFENIGNRTTPFEKIPPYAVYIPPHKSVLVKTEL
                     NLELAVCKAPSQGNYPVRLISPNHIGVEKRGFGNNQRLVHNILPETEAADSLLVVEVF
                     TDEGNTSSYPSHKHDDKHSTEETYLEETYYHRFDPPQGFAMQRVYTDDRTLDECMAVY
                     DKNVVKVPRGYHPVATIAGYNNYYLNVMAGPVRKWKFTWEQDHLWVNSETYKAKFE"
     gene            complement(8077..9528)
                     /locus_tag="PXB09_001829"
     CDS             complement(8077..9528)
                     /locus_tag="PXB09_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5233918.1"
                     /translation="MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVAD
                     LGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWFELIMQNQEELAQILSLEQGKPL
                     AESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN
                     AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDVEGVG
                     RELSTNPTVRKLTFTGSTRVGKILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVE
                     GVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLGSPFEEEVTIGALIS
                     ERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQAMKVAREETFAPL
                     APIFKFETEEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEI
                     APFGGWKESGLGREGSKYGIEEFLEIKYLCMKV"
     gene            complement(9706..11016)
                     /locus_tag="PXB09_001830"
     CDS             complement(9706..11016)
                     /locus_tag="PXB09_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5233919.1"
                     /translation="MIYAEIFVVLAAIYLGLRSGGLGIGLYGGLGLAILTLGFGLPMG
                     SIPVDVMLIIMTVVIGAAVLQAVGGMDLLVRYAEVLMRKNPKYINFIAPMITWLMTIM
                     AGTGFIVFSTLPVIAEVAKESGIRPSRALAGSVVSSQLAIAGSPLSAAMAAMIAVMEN
                     NSVTFFQVIAVCLPVSFIASMVAAFVASKQGCELQNDVVYLERLKAGIVSPSRKLASE
                     STYSKGAKLSIGIFLLATVLVVLLAAVPGLKPVYENGKSMSTRDIIIVMMLASSCLMM
                     LVGKIKPDTIVASPIFRSGMTSIAVIIGIVTLGMTFVDAHLIEIKASIGNILTEYPML
                     LAVVLFFTCALLYSQGSTSALIIPLAVSLGIPNWAILASFIAITGIFILPTYPTSLAA
                     MELDTTGSTRAGKYIIDHPFMLPALVGVAVGLAFGFVWAPMIVS"
     gene            complement(11032..11727)
                     /locus_tag="PXB09_001831"
     CDS             complement(11032..11727)
                     /locus_tag="PXB09_001831"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDL5233920.1"
                     /translation="MARNIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSI
                     PDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAHYWFEHLKAKSQVEM
                     LSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS
                     IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPMRYVDSTL
                     VLVKKAIDWYQTH"
BASE COUNT         3377 a         2760 c         2336 g         3351 t
ORIGIN      
        1 aaaagaaaat tgctgcaata taatcaatgg tttttgtgag atatatttcc ttttgctgta
       61 tcgcaatata gataggcact tgatgaacaa gttggaagta agcatccaaa taaacaacta
      121 tcaatatgaa gcctaaaaac cattctgttt gcataagaac attgataggg ctgttttttg
      181 tgctaaaaat ttctttaatt gaactcataa tttttcctta aatgtaaaaa aacgtacctc
      241 aaccaatttg agatacgttt ctattttaat gtaattatta aatctcactc acctccaccc
      301 accttttctc ctccgccgat tttgctatcg cttccaatac tctggagatt ttatagcctt
      361 cttcaaaatc gggatacatc gggtcatcag cggcgatgcc gttgatgagg tcacggattt
      421 ccaccgcttt ttggtcgtta aaaccgatgc cgtgaccggc actcacacaa aaagcagcgt
      481 agtcgggatg ttccgggccg actaaaatgg ttttgaatcc ttggcgggat ttatcgtcat
      541 cgtgcaaata gagtttgagt tctgccattc gttcttgggt atagctgagc gtgcctttag
      601 tacctgtaac gacataggtc agccccattt tacgcccgca ggaaatgcgg gagctttcga
      661 gcgtgcccat taccccatta gcaaatcgta tgagactact tgcctgatct tcgttttcta
      721 ctttgatttt ttctgctgga ttgtgcggac tagggcgttc ttcaatcact gtttgcatat
      781 cgccgataac acgctcaatg tctgaaccaa ccaaatagtg tgcgatactg acaatatgtg
      841 cggctaaatc tcccaacgta ccaagcccgg ctttggcttt gtagcagtgc caatcaatcg
      901 gggtattagg gttggcgaga taatcttcgt tatgcgtgcc gtagaaatgc accacctcac
      961 caatttcgcc gttttgaata atttggcgag ccagttgggt ggttggattt ttgatatagt
     1021 tgaaaccgac caaggtttta actcccgctt gttgagcggc aatcaccatt tctttggcat
     1081 cttgggcggt gagtgcaagc ggtttttctg aatagacgtg tttgccgtgt ttaatcgctt
     1141 ctaaggcaat ttctttgtgc agaaaatttg gtgtacaaat gtccaccaca tcgacattcg
     1201 gatcggtaac caattttcgc caatcgtcag tagcacgctg aaagccaaat tctcgggctt
     1261 tttgatcggc taatgcttgg ttgatttcgg caaggtattc cagttggatt ttgcctttaa
     1321 gtggaaacag ggttggggct tgagcgtagg caatggcgtg gcagcgaccg atatagccgg
     1381 tgccaactaa gccgattttg atggttttca taatactatc ccagtagggt gcgtttgcta
     1441 acgcaccatt agaattttca gtgcattggc aaacgcaccc tataagaaag cggtctggtt
     1501 ttgcaaaatt tttacaaaat cagaccgctt gtgttagcta tctataatgc tcctcgtctg
     1561 ctcttcgcat aggtgtcgaa ggcaacggca aggatgatga ttaagcccat aatgatttgt
     1621 tggtagtaag cggaaacgtc cattagtact aaaccgttaa tcaatacacc cataataatg
     1681 gagccgatga tggtgcctgt gactcgtccg tatcccccca ttagggaagt tccgccgata
     1741 accactgagg caattacacg tagctcaaaa gaaacgccgg caacggattc ggcactgcct
     1801 aaacgggcgg agagaatgaa accggcaagt cctgccaatg ctccgatcac cacataaaca
     1861 ctgactaagg tacggttaat attcacaccg gctaaacggg ctgcttccgg attgccacct
     1921 accgagtaca catagcgtcc ccagcgggtt ttatgcaatg cgaagtaacc gataatggcg
     1981 actacggcaa aaatcactac cggcaccggt acgcctaaaa tatcgccacg tccccaccag
     2041 cggtaacctt cgtcaaatcc ggcaattggc gagccgttat ttaacacaag tgttaaacca
     2101 cgccaaattg tcataccgcc aagcgtgata ataaacggtg gcagtttgag tttagtgacg
     2161 cctaagccgt gtaaccaacc aatgaaagtg cctaaaccta aacagatact caaacctatc
     2221 agccagctca ttccgcccca agcaccggct tctagcgtta ccgtattatc gcctttgata
     2281 atataggccg cgaacattgc ggtaacagca aggattgagc cgacagagag atcgatccct
     2341 gcagttaaga tgacgaaagt cattcctacc gccataatgc cgaaaatcga cacttcggtt
     2401 aaaacgttat agatgttgcg ttgcgataaa aatgccccgt tttgtgaagt gaagaaaata
     2461 atcagtaaga tcaagaaaat cagtacgccg aaacgttcaa agaaggcgat aaaatcgatt
     2521 tttcctttgt catcgaccat acccatattt tttagaaatt gcgttgtcat acaaacctct
     2581 cttatgctgc cgctttacgc tgaacgccaa cagccatcat tgacattaat ttttcttcgg
     2641 tggcatcatc gccgtgaatt tcgccagtta cccgaccttc ggaaagagtg ataatgcggt
     2701 cggaaatcgc cataatttcc ggtaaatcgg aggaaatcac taataccgca acaccttgtt
     2761 ttgccatatc aaacagcact tggtgaacct cagattttgc cccaacatca atacctcgtg
     2821 tcggctcatc aacaattagt actttcgggt tgagtgccat acaacgggct aaaatcactt
     2881 tttgctgatt accacccgat aatttgcggg cttcaagttc gctacttgcc attttgatgc
     2941 gtaacgcttg gcggtaggtt tcgattaaat catcttcttt ttgattatcg acaaacaagt
     3001 tacccttcaa taatttgctt aaaatcggca gggtcatatt ggttttaatc ggtaaaccga
     3061 gaactaagcc ctcttttttg cgatcttccg gcacaagggc aacccctttt tccaaagcat
     3121 ctaacggcga ggtggcagca taaggcttac cgtctaggct gatttcatca gccgtataat
     3181 tttctacccc aaacaagcaa cgggcaattt cagttcgccc tgcgccaact aagccggcga
     3241 tccctaatac ttcaccctcg tgaatgttaa aagagacacc gtggagagca atgccgtgtg
     3301 gatcgaatgc cggtttttcc cgatgcagat ttttcacagc taaacgtatt ggtcggtggg
     3361 tatggtgagt ctcttctggt ggacggcgag taaaggcaac ttcacgtcct accatcattt
     3421 taataatttg atcgacattc acatttttga cttcaccctc accagaatag cgcccgtctt
     3481 ggaaaacggt gaaacggtcg catagggcaa acacttcgtt taagcggtgg gtcacataaa
     3541 tcacgctaat gccacggctt tttaaatcac gcacgatttg gtgtagtgtt tccacttctt
     3601 tatcacttaa ggcagcggac ggttcgtcca taataatcaa cttagcgttt aaggtcattg
     3661 cacgggcaat ctcgaccatc tgctgttgtg ccacacttaa acgggaaact tgggtgtcag
     3721 gtttgatatt taagccgaga ttatccagca ctaattgtgc ttcctcattc accgcttttt
     3781 cattgacgaa taaacctttc accggctctc tgcccaaaaa gaaattttca gcaaccgtca
     3841 tattcggtaa caagttaaat tcttgataaa tcgttacgat gcctttgagt tggcgatcaa
     3901 acggggaatc gctcaaactt aaggtttcac cgttaaagat aatttcgcca cttgtttgtg
     3961 gctgagcgcc tgaaagtgct tttaataagg tcgattttcc tgcaccgttt tcacccaaca
     4021 atgcgtgaac ttcgcctttt cccacagtca gtttcacgcc attgagtgcc ataacaccag
     4081 agaaactttt tgtcagatct ttcacttcaa gtaagggagt agacatacaa cctccgtaaa
     4141 aaaacgccct ccggcctcag ccggaaggca gataaattat tcgctgattt ctgcaaaacg
     4201 ttctgcttct tgcagattat ctttcaggat aatttttggc ggatagtccg caccgctcac
     4261 ttctttgctc tcacggatat tgccaaccac ttgctctaat gcggtgctta ccgcaaaact
     4321 tgggcgttgg tcagcggtga gatacaacca gccatctttc acacgtgcaa gagcctcagg
     4381 ggttgagtca aagccggtta ctaaaatatc gccggctttc aaaccttggc tacgcaatgc
     4441 ttcaatcgca ccaagtgcca tatcgtcatt cgctgaaata atcacttctg gtttctcttt
     4501 taaggttggt aacacacttt caataatgcg taatccctca gaacggagcc agttaccggt
     4561 ttgatcaacc acgattttat atttgtcacc accggcagct aattcatcac gaataccttt
     4621 ggtacgttca atgttagagg ttgaacccgg ctggccggtt aaaagaataa tttttgcccc
     4681 attcgggtat ttggctttca ctgcttttgc gacttcttga ccgcctgtgt agttatttgc
     4741 cccaaagtgt ggaaccggct tactgctttc aacttttcgg tctaatgtcg cagcaggaat
     4801 tttttctttg ataatttctt ccactgcacc tgaaatcgca ttcacatcat tcggggaaat
     4861 gataatgcct ttagcaccac gggtaattgc attttctaag tcagaagcct gcttagtaga
     4921 agaactttgc ccgtctaata cttgcaattt gatctccaac tttttactgg tttctaccgc
     4981 tactttttgt agttgaactt caaacgggct ggataggttc ggtaagctaa ataccacaag
     5041 ctcatctttc gcaaagctgt tcattgctaa gcctaacgtt aaagcactca atacaaattt
     5101 aatacgcttt ttcattacaa aatcctcttt ttaagatggg aattgacggc gaatattgcc
     5161 aatgttactt caaactgcga aggaaactta agtcttattt caataataaa cctcaatgaa
     5221 ataaattttt caatttagaa tatatcattc aaaattttcc aaaccaaatg ctttgtttca
     5281 aatttgttac gtagatcaca tttttaggaa gagataaatg caagcggtca aaacaggtcg
     5341 cttttttgca aaaatttgaa taaaaatgac cgcttgtgag atgaaaacca ataaaaaagc
     5401 ggtgatttct caccgctaaa cactcaaaaa agaaatgtac tcgttattat aaggttggga
     5461 aattaaatgc cgcttggcta cgcaccgagc tgtccggcca acgggttgtg atggttttca
     5521 tacgggtgta gaaacgcacg ccgtctgtgc cgtacacatt gagaggcccg aaaatagagg
     5581 ctttccaacc gccaaagcag tggaacgcca ttggcacagg aattggaata ttcacgccca
     5641 ccataccggc ttgtacatct tgggtgaatt gacgtgctga atcgccatct gcggtgaaaa
     5701 ttgcactacc attgccgtat tggtgactgt taatgagtgc gatcccttcg gcataatctt
     5761 tcacacgcac aacagagaga accggtccga agatttcatc ttgccagatg gtcatttcag
     5821 gtgtcacgtt atcaaacagc gtacctccga caaagtaacc gttttcaaac ccttcgactt
     5881 tatagcctcg accatcgaca cagagtttcg ccccctgtgc caccccttga tcgatatagc
     5941 tctcaatttt ggctttatgc tctttggaaa tcaccggccc catatcattt tcaagcacgc
     6001 cttgtggtag taagcctgaa ccgattttca atgctttgac cttaggaatt agctcttcaa
     6061 tgattttatc ggctaattca tcaccaacaa ctaccgctac cgatagtgcc atacaacgtt
     6121 caccggctgc accaaatgct gcgcccagta aggcattaat tgtgccttgt acatcagcat
     6181 ccggcataat caaagcgtgg tttttcgcac cgcccaaggc ttgaacccgt ttgccgtttg
     6241 ctgagccttt ctcataaata tattgtgcaa ttgcagttga gccgacaaaa ctcaccgcct
     6301 gaatgcgaga gtcggttaaa agaatatcta ccgcttcttt atcaccttgc accacattga
     6361 atacaccgtc cggcaagccg gcttctttta ataattctgc caagcgaata gacacacttg
     6421 ggtctttttc agacggtttt aaaacgaaag tgttaccgca agcaagtgcc actgggaaca
     6481 tccacatcgg taccattgcc gggaaattga acggggtaat gcctgccact acgcccaacg
     6541 gttgctggat tgagtgaata tcaatgccac gccctgcatt ggcggagaac tcaccttttt
     6601 gtaagtgtgg aataccagtg gcaaattcca ccacttctaa accacgggtt aattcgccaa
     6661 tcgcatcgga atagattttg ccgtgttctg agctgattaa acgagccaac tcatcaaagt
     6721 ttgcttccaa taactctttg aatttaaata aaattctggc acggcgtagt ggtgattgtt
     6781 gtgaccagct tttgaaagcc tgatcggccg ctgcaattgc cgcatcgact tcgtttggca
     6841 ggcttaattt gacttttttg gtctcttcac cggttgcggg attaaatacc gaggtaacac
     6901 gctggctttg gctttcaacg actgcaccgt taataaaatt ttggacaaat tggctcattg
     6961 gaggctcctt atcaactgat tgagaggaaa aacggataaa atacagccga taaactaccg
     7021 ctaaaaatgg aaaatatcaa tacataatac taaaaaatga aaattttatt tcatttttgt
     7081 gatctaagta gcaagtttac agattgccgg tattaaaatg agacaaaatt tcgtatagtt
     7141 tgaaagcgta ttccatttcg ttaagcgagg tttcctatgt ctagtccatt attgtctaaa
     7201 cccaatttca accaacatga agggttaatt cagcacatta cccctgaaaa tgcacagtgg
     7261 gaatatgttg gatttgatgt ttatcagctc agtaagcaac aaattacgct ggaaagtggt
     7321 gaaaatgaac tttgtctagt ctttgtgacc ggttttggct ctgtctatgt tgatgattat
     7381 gcttttgaaa atatcggcaa ccgtaccacg ccatttgaaa aaattccgcc ttatgcggtc
     7441 tatatcccgc cacacaaaag cgtgttggtt aaaaccgaac tcaatttaga attggcagtg
     7501 tgcaaagcac caagtcaggg taattatccg gtgcgtttga ttagcccgaa ccatatcggt
     7561 gtggaaaaac ggggctttgg caacaatcaa cgcttggtgc ataatattct gccggaaacc
     7621 gaagcagccg acagtttgct ggtggtggaa gtctttaccg atgaaggcaa taccagttcc
     7681 tacccaagcc acaagcacga tgacaaacac tctaccgaag aaacctattt ggaagagacc
     7741 tactaccacc gcttcgatcc accacaaggt tttgcaatgc aacgggttta taccgatgat
     7801 cgcacacttg atgaatgtat ggcggtgtat gataaaaatg tggttaaagt gcctcgtggc
     7861 taccaccctg ttgctaccat tgccggctat aacaactact acctaaatgt tatggcaggg
     7921 ccggtacgca aatggaaatt tacttgggaa caagatcatc tttgggtgaa cagtgaaacc
     7981 tataaagcca aatttgagta atgcaagcgg tctttttcca ccaatttttt acaaaataag
     8041 ggattaaaaa tgggacgctt ttggcgtccc attcggttat actttcatac aaagatattt
     8101 tatttctaaa aactcttcaa taccgtactt cgaaccttcc cgcccaagtc cagactcttt
     8161 ccagccgccg aacggagcga tttcgttact gatgatcccc tcattaatcc cgacaatgcc
     8221 atattccaac tgctccgata ctcgccaaat tcgcccgata ttttggctga ataagtaagc
     8281 cgccaaacca aactcagtat cattcgccca ctggataacc tcttcttcgg tttcaaattt
     8341 gaaaatcggg gcaaggggag caaaggtttc ctcacgagcc actttcatcg cttgagtgac
     8401 atttttcaga atggttggct ggaagaatgt gccacccagt gcgtggcgtt caccgcctaa
     8461 caccagttct gccccaagtg aaagggcatc gttaatgtgg ctttcgactt tttccaccgc
     8521 tcgttcacta attagtgcac ctatcgtgac ctcttcctca aatggcgagc caagcttgat
     8581 ttgagccact ttctcactca attttgcaag aaattgctca taaatgcccg cttgcacata
     8641 aattcggtta gcacagacgc aggtttgccc accgttacgg aatttagagg caaacacgcc
     8701 ctcaaccgct gtatctagat ccgcatcatc aaacacaatc gccggtgcat taccgcctag
     8761 ctccaatgcc aattttttta ccgtccctgc cgattgttgc attaaaattt tgccgacacg
     8821 ggtggagccg gtaaaggtga gtttgcgtac ggtcggatta gtgctcaact cccgccctac
     8881 accttcgaca tcgctactgg taataatgtt aaatacccct ttgggaatac ctgcttgatc
     8941 cgctaattgg gctaatgcta aggcagaaag cggggtttct gccgccggtt taatcacaat
     9001 cgcacaacct gccgctaacg ccggtgccgc tttacgggta atcattgcat ttgggaaatt
     9061 ccacggtgta attgctgcca ccacgccaat gggttgttta gtcacaaaca agcggcgacc
     9121 ggctttatct tgtggcaaga catcgccata aatccgcttg ctttcttcgg caaaccactc
     9181 gataaaactg gctccatagg caatctcgcc tcgactttct gccaatggtt taccctgttc
     9241 tagacttaaa atctgggcga gttcttcttg gttttgcata atcagctcaa accatttacg
     9301 caaaatcacg gaacgctctt tgggcaataa tgcctgccat tttttctggg caactgcggc
     9361 tgcttcaatc gcttgagcgg tttcttccgt gcctaaatca gccacctcac cgattttctc
     9421 accattagtc ggattctgta ccgtaaaggt tttcccattt tggcttgaaa caaatttacc
     9481 gttaatatag gcttggaaac ggagtagcaa aaatttgtga tttggcataa tcactccttg
     9541 aatggttaaa aagagaacaa tattgactat aatccaattt cagtaaagag aaaagagctg
     9601 aaaaataact ttttactcaa taataaagca ccttagacaa gcgttcttct aaggtgcagc
     9661 catttattat tgagaattaa cttaaattct ctacatattt aataattaag atacaatcat
     9721 tggagcccat acgaatccaa aagcaagccc aacagcaacc ccaactaaag ctggaagcat
     9781 aaacggatga tctataatat atttgccagc acgagttgaa cccgtagtat ctaattccat
     9841 cgctgctaat gaagttgggt aggttggcag gataaaaatg cctgtaattg caatgaaaga
     9901 agccaaaatt gcccagttag ggatccccaa gcttactgct aatggaataa taagagcaga
     9961 agttgaccct tgtgaataaa gtaatgcaca agtaaaaaag agtactacag ctaacaacat
    10021 tggatattca gttaaaatat ttccaataga ggctttaatt tctattaaat gtgcatcgac
    10081 aaaagtcata cctaatgtaa caatcccgat aattaccgca atagaagtca ttcctgagcg
    10141 gaaaattgga ctagccacaa tcgtatcagg tttaattttt cctaccaaca tcattaagca
    10201 cgaagaggct aacatcatca caataattat atctcgggta ctcattgact tcccattttc
    10261 atatactggc tttaaccctg gaacggctgc aagtagaaca accaatacag ttgctagtaa
    10321 gaaaatgcca atcgatagtt ttgctccttt tgaataggta gattcactcg ctaacttacg
    10381 agatgggctg acgattcctg cttttaaacg ttctaaataa acaacatcat tttgcaattc
    10441 acagccctgc ttagaagcaa caaatgcagc aaccatagag gcaataaaag aaacaggtaa
    10501 gcatactgct attacttgaa aaaatgtaac actgttgttt tccattactg ctatcatagc
    10561 cgccattgca gcactcaatg gagaacctgc aatagctaat tgagaagaca caaccgagcc
    10621 ggctaatgct cttgaagggc gaataccact ctcttttgcc acttctgcaa tcacaggtaa
    10681 ggtggaaaag acgataaaac ctgtaccagc cataatcgtc attaaccaag taatcatcgg
    10741 tgcaataaag ttaatatatt taggattttt acgcatcaat acttccgcat aacgaacaag
    10801 taaatccata cctcctactg cttgtaacac agcagcacct attacaacag tcataataat
    10861 cagcattaca tcaactggaa tagaacccat aggtaaacca aaacctagag ttagaatcgc
    10921 aagccctaaa ccaccatata gtcctattcc taagccccca gaacgcagtc ctaaatagat
    10981 tgcagcaagt accacaaaga tttctgcata aatcatatcc atctccttaa attaatgagt
    11041 ttgataccaa tcaattgctt ttttaaccaa taccaacgtt gaatctacat aacgcattgg
    11101 ctcacgctct atttcttgag ctaaaataat aggtacttct gtacaaccta aaataattac
    11161 ttctgcacct aaacgaatga gttcatcacg ttgttgtaac attagctctg tggctttctc
    11221 taactcacct gattttaata aatagatact atccattact gccttttgac cattttctgt
    11281 cgggcaaata aaagtcagtc cttgtgcttc aagctgtttt ttgtataggt ctaccgccaa
    11341 agttgcatca gttgccaaca atccaacccg ccattttcca cacttcaaaa cctcatcaac
    11401 cacacaatca atcatactta gcatctctac ctgacttttg gccttcaagt gttcaaacca
    11461 ataatgtgca gtattacatg caataatgat gcaggttgcc cctgcactct caagcccttc
    11521 aatatatttt tccattaccg gagccggatt ctctccattt gctaaaatat agcgagttct
    11581 atctggtatg tcgggaatag aggaaatcaa taatggaata tgagcttgat cacaatcagc
    11641 tggtgttaag cggataaatt tttggaacat atctgctgtt gctgcaggtc ccattccacc
    11701 taaaatgcca ataatatttc ttgccataca cttctcctta taagatttaa tttactgcga
    11761 tgacttatac aaacaagtta tgcaaaaaag aaatgcaata aatcgaatca gtatgcaaaa
    11821 aatg
//
LOCUS       DANLTI010000086        11428 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.086, whole genome shotgun sequence.
ACCESSION   DANLTI010000086 DANLTI010000000
VERSION     DANLTI010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11428
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.086"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(1..503)
                     /locus_tag="PXB09_001832"
                     /pseudo
     CDS             complement(1..503)
                     /locus_tag="PXB09_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251101.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(756..1586)
                     /gene="fghA"
                     /locus_tag="PXB09_001833"
     CDS             complement(756..1586)
                     /gene="fghA"
                     /locus_tag="PXB09_001833"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDL5233921.1"
                     /translation="MQQFENYRCFSGEQQVWQHFSASLNCEMKFAIYLPQSAKTQKLP
                     VLYWLSGLTCTEQNFITKSGFQRYADEHHLIVVAPDTSPRGVNVANDEAYDLGQGAGF
                     YLNATQGEWTTHYQMYDYIVSELPTLINAHFPTNGKQSIFGHSMGGHGALTIAFKNPG
                     QYQSVSAFAPIVAPTQVPWGQKAFLAYLGEDQTAWKAYDSVALLEKYRPSLPILIDQG
                     SQDSFLSDQLKPEIFCETADRLGIPYQFNLRDGYDHSYYFISSFIGEHIAFHAKHLKD
                     "
     gene            complement(1666..2724)
                     /locus_tag="PXB09_001834"
     CDS             complement(1666..2724)
                     /locus_tag="PXB09_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDL5233922.1"
                     /translation="MAYPIKSYATFSATTPLAPHSFERRELLEDDVLIDILYCGVCHS
                     DLHMARNDWGWTQSYPLVPGHEIIGRIIKVGKNAKKFQIGDLVGVGCMVDSCRECSPC
                     QHGLEQYCEVGNIGTYGGIDRFDGTPTQGGYSTCVVVSEDFVLKVSENLDTKAVAPLL
                     CAGITTYSPLRHWNVKAGSKVAVVGLGGLGHMAVKLAKAMGAEVTLFTRSLGKADDAY
                     RLGASRVVLSTDEKQMADVANTFDLIIDTVPYTHDLKPYIPTLALDGTLVLVGLVGEL
                     EQTINTVPMILGRRSISASVIGGIQETQEMLDFCAEHNIVPDVEMIDMQNINDAYERM
                     LKSDVKYRFVIDMGSLKG"
     gene            complement(2911..3846)
                     /locus_tag="PXB09_001835"
     CDS             complement(2911..3846)
                     /locus_tag="PXB09_001835"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03571 family LLM class oxidoreductase"
                     /protein_id="HDL5233923.1"
                     /translation="MNTLSPIFSQVFGQNQLTLGLIAPFMGYQNHIPDNLTTIADNAR
                     LAENLGFSALWVRDVPFYDPHFGDVGQGLDPMVTLGFLSAHTQNIALGTAGLIAPLRS
                     PIHIAKMATSVDSLSHGRFLLGLSSGDRPVEYPAFGADFASRSERFRESIDLINTLTE
                     QDFPHFKGKHYADLTDNLDLLPKPKHRLPIVAIGRARQEMDWLANVPDAWIWHGVNPA
                     DTANIINTLADLRQKDTPTAFGYAQFVEVLDDKNAKAQLFNNIYLRGGAKGLADFWAK
                     EQEKGVKHLALNLKPTQRPADEVLTELAEYALTQF"
     gene            complement(4098..5153)
                     /locus_tag="PXB09_001836"
     CDS             complement(4098..5153)
                     /locus_tag="PXB09_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5233924.1"
                     /translation="MGRPRKQQNRYLPENLRPKTVTRKSGKTVIYWLYRTHGKTEISL
                     GTNRNEAFIKAAQLNIERESQTARITFGLVAKRYRDEVIPQKKASTAQTDLCKIKNLL
                     LFFNDAPLEEITPQHIREYMTWRKDTPGSANNEFSMFSHIWQYAREWGYTNLPSPNIG
                     MKRYPIRKREIYVENNIFQMVYEVADQDMRDLMDLAYITGQRPVDLVNIRKEHIFDGY
                     LHIVQQKTQAKLRIEIVGKLADIIQDRLEKATGTHLFSTKKGEKLTARKLGKRFTYIR
                     EQAVKNNPEYANEIMAFQFRDLRAKSGTDKALSLGEEAARQQLGHTSVQMTKTYIRKA
                     PIVTPIKESVPSSKHQS"
     gene            complement(5113..5388)
                     /locus_tag="PXB09_001837"
     CDS             complement(5113..5388)
                     /locus_tag="PXB09_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5233925.1"
                     /translation="MEQPTEFLTKDELADLTGYRQKKRQIEWLRERHYIIQDENKYKP
                     LVLYKDVYGHPRQQYPEAQSTGKWKSPAYLMGVKNGKTTQTTESLLT"
     gene            complement(5478..5984)
                     /locus_tag="PXB09_001838"
     CDS             complement(5478..5984)
                     /locus_tag="PXB09_001838"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDL5233926.1"
                     /translation="MRILPRNENYAATENGEIFSFLSNKILKPRPLKNGYLRVQLVDE
                     NGVKDYLIHRLVCETFHGYPDLHVNHKDRDKTNNRPENLEWCTRSENMLHCSRLGGFS
                     KQSERMKKMNIESCSVPVAAITLDGKLFKKYTSMTSAGKDGFSHSKISLCIQGKRKTH
                     KGYIWQKL"
     gene            complement(5962..6558)
                     /locus_tag="PXB09_001839"
     CDS             complement(5962..6558)
                     /locus_tag="PXB09_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5233927.1"
                     /translation="MPLSITANLTKAVQLKHQGEALSGGSETLVVHGTQDPIISQNKA
                     HCLGRNNGQENVLFEVKGAEAVRISEIQDKTPTLKARMGTGGNNIPCIALAGNTIGRQ
                     PQNDGNGNVFDESGVSYMLTRTDVHAVSAGTTIRKLTPTECERLQGFPDGWTKITYRG
                     KSAEECPDSPRYKAIGNSMCTNVMKWIGERLSAYLTSQ"
     gene            complement(6479..7798)
                     /locus_tag="PXB09_001840"
     CDS             complement(6479..7798)
                     /locus_tag="PXB09_001840"
                     /inference="COORDINATES: protein motif:HMM:NF024795.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HDL5233928.1"
                     /translation="MNNIIKFTYGSICSGIEAASVAWHDIGTPLWFSEIEPFPCAVLA
                     HRFPDVPNLGDMTALPEKILNRKIPAPDVLVGGTPCFTAGHMVLTDKGYMPIETLSVG
                     DLVVTHKGQLKPILRVGSEIKPVGKLTAVGLPESIVCTPEHPFYAQKWQTINTKRNGK
                     YHRKTIISKPEWIEAHKLEGYQWVSLTDFSVMPYGGFHSKLTDDEVLLIAGYYLGDGW
                     IRRWKGKNKKAVVISVNKEKYRKFSLSFAKLPHHITTENNSVIKITICDTELADFLYS
                     QFGEKAGGKTIPAWCLSHSFRSKIFEGYMITDGSFRNGVYTANSISKSLAYGIAALSQ
                     TLGYISSVSKVTVAPTKEIQGRIVNQNDYYQMRAFLQSTSRKSRLDENRLLRSVQSFE
                     ITGNEVVYNIEVADDNSYILNNAVVHNCQSDKGGTVKASGGGFEWRE"
     gene            complement(7795..8700)
                     /locus_tag="PXB09_001841"
     CDS             complement(7795..8700)
                     /locus_tag="PXB09_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5233929.1"
                     /translation="MQFQEHNNRKKADKFAEYITGEALRRYVAEKVKQYARNNVSVFD
                     GAAGSGQLEQFVRPTSFTAVEVQSESCDVLRHNFPTAQIYNQSFFLYPNGEPCDCVIM
                     NPPFSLKFKDLSQAEQAQIQSEFPWKKSGVVDDIFVLKGLANSHQWGFFILFPGVGYR
                     QTEKRFREEVGNQLVELNRIQNAFEDTPIEVLFLVVDKTKTTDDCSRELIDCAGGQIQ
                     QICADKWKIRPDHWESIQPPPPPQEEIKPLELEAFAREQAIERIVGEVRLSKLIAEFF
                     EPELRRTFNAFIDDICVAVQAEKIV"
     gene            complement(8934..9611)
                     /locus_tag="PXB09_001842"
     CDS             complement(8934..9611)
                     /locus_tag="PXB09_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5233930.1"
                     /translation="MSNQVQFPVFNFNSSAVRVIIDPNQEPWFCGADVCRILGYVNES
                     LTLQKHCKENGVSKRYLTDKMQRQQKAIFINEPNLYRLIIKSRKPEAEKFEAWVFEEV
                     LPQIRKTGKYALQNNQQNLPLAPPPKKYSFDFTEDELQSLIWAWFAFVRGIHTFRYIY
                     PMFQKLGSNIAPEIYGQGFEYSHTAQSAHKILERITKEFDYDPMTNWRVLKHVRGFDP
                     AFKKPTF"
     gene            complement(9859..10698)
                     /locus_tag="PXB09_001843"
     CDS             complement(9859..10698)
                     /locus_tag="PXB09_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HDL5233931.1"
                     /translation="MANSVMIVQGVEVKVTARDGEDYISLTDMCKAFGDSDQLIKNWL
                     QNKNTIEFLQVWEELNNPNFNLVELHQIKNNIGLNRFVMSVKKWTATGAIGLVAKAGR
                     YGSGTYAHKDIALEFGSWLSPEFKLYLIKEFQRLKQQEANESKLEWSVKRILSKANYR
                     IHTDAIKAHIIPALLNTKQHTFVYSSEADILNQALFGQTAKQWKDRNPNLKGNMRDHA
                     TVEQLTVLAALESQNALLIEQGYSQEERLAMLNRLAIQQMSSLLQTRAIEELKEKPLL
                     IEE"
     gene            10928..11305
                     /locus_tag="PXB09_001844"
     CDS             10928..11305
                     /locus_tag="PXB09_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233932.1"
                     /translation="MFSLLRDALTFAAMFTGILFPAIIHKYDLSLGTQIQLLSFVPAF
                     FVLCHFLIKRKYQRDFDRLSYLSAVVCVAMCAGVGAFSQSEMIELGFKVERVLDYVTI
                     KFLLYFWSLLLLPVVLRKLFGKD"
BASE COUNT         3111 a         2344 c         2383 g         3590 t
ORIGIN      
        1 aataaaaata tagaaaaaac cgaagcgttc ttcgcttaac attttttgaa tatctaagtg
       61 gaatacgcgg tggccccaat gtttgtgaaa taataatact gatagggtag ttgtccctag
      121 atagaggtag ttgtccctag atagagtagg tgtaaataca ttggcacttt gccaataaac
      181 agatagaaac tgatcattac tggcaagcta aaaatagtaa caagaacact cacccgtagc
      241 cagccaaggt atttaaagta atgcagctta aaaactttat taactaaagc gtatcctatc
      301 aaataaaaaa gaaagatagt taaaaatgtg ccaaaaacgt aggctagtgc gcgagctata
      361 ccggcattac caacctcaac atgccaccac gggtagccat gaaaagcagc aataccccaa
      421 gcataacagt aagcggtaga aaaagagatt aaagtaaaga aagcgagagt aagagaagag
      481 ttgatgaatt tctgattagt cataacagta aatagattgc acctacttag ttaaagatga
      541 aacacaagaa agcagactga gtttagcttc cacccaactc ctttgtttag aggagaactt
      601 tattaaagca cgacttttgt tgtatttcaa acctttgttt ttatacaaaa caaccgtgtt
      661 gtaaaaaatg atcgtaaact gaccgcttgt aatgcactct gaatatatcg aaacatgata
      721 aaaatgataa agcatgtttc gataatttac tgtctttagt cttttaaatg ttttgcatga
      781 aaggctatat gttcaccgat aaagctacta atgaaatagt agctgtgatc gtaaccatca
      841 cgtaaattga attggtaggg tattccaagt ctatctgcgg tttcacagaa aatttccggc
      901 tttaactgat cgctcaaaaa gctgtcttgg ctgccttgat cgattagaat tggcaagctt
      961 gggcgatatt tttccagcaa tgccacgcta tcatacgcct tccaagcggt ctgatcttcg
     1021 cctaaatatg ctaaaaatgc tttttgcccc caaggaactt gggttggggc gacaatcggt
     1081 gcaaatgccg atacactttg atattgcccc ggatttttaa atgcaatggt taaggcacca
     1141 tgtccgccca ttgaatgccc aaaaattgat tgtttaccgt tagtcgggaa atgagcatta
     1201 atcaatgttg gcagttcgct gacaatgtaa tcatacattt ggtaatgtgt tgtccattcg
     1261 ccttgcgtag catttaggta aaatccggca ccctgaccta aatcataagc ctcatcatta
     1321 gcgacattca cacccctagg gctggtatcc ggtgcgacca caatcagatg atgttcgtcg
     1381 gcataacgtt gaaagccaga tttagtgatg aagttctgct cggtacaggt taaaccagaa
     1441 agccaatata gtacgggtag cttttgtgtt ttagcagatt gcggcagata aatagcaaat
     1501 ttcatttcac agtttaagct ggctgagaaa tgttgccaaa cctgttgttc accgctaaaa
     1561 cagcggtagt tttcaaattg ttgcataata ttccttacaa gcggtttaat tccgctgatt
     1621 ttttgcaaaa ataaaggcgg aactcaccgc ctttatattg taatatcaac ctttcaaact
     1681 tcccatatca atcacaaacc gatatttcac gtctgatttc agcattcgtt cataagcatc
     1741 attgatgttt tgcatatcaa tcatttccac atccggcaca atgttgtgtt cggcgcagaa
     1801 gtcgagcatt tcttgagttt cctgaatgcc gccgatgaca gaggcggaaa tagagcggcg
     1861 gcctaaaatc atcggtacgg tgttgatggt ttgctccaac tcaccgacca agcccaccag
     1921 caccaatgtg ccgtccaacg ctaaggttgg gatataaggt ttcaagtcgt gggtataagg
     1981 cacggtatcg atgattaaat caaaggtatt tgcaacgtct gccatttgct tttcatcggt
     2041 agaaagcacc acacggcttg cgcccaaacg gtaagcatca tcggctttac ccagtgagcg
     2101 agtaaaaagc gtaacttccg ctcccattgc tttggcaagt ttaaccgcca tatgccccag
     2161 tccgccaagc cccacaacag cgacttttga gccagctttg acattccaat gacgcagggg
     2221 cgaataggtg gtaatgcctg cacacaaaag aggggcaacc gctttggtgt ccaagttttc
     2281 agagactttt aatacaaaat cttcactcac caccacgcat gtgctgtaac cgccttgtgt
     2341 tggtgtgccg tcaaagcggt caataccgcc ataagtgccg atgttgccca cttcgcagta
     2401 ctgctccaaa ccgtgctggc aaggactgca ttcacggcag gaatccacca tacaaccgac
     2461 accgaccaaa tcgccgattt ggaatttttt ggcgttttta ccgactttga taatacgacc
     2521 gatgatttcg tgccctggta caagcggata gctttgcgtc cagccccaat cattgcgagc
     2581 catatgcaag tctgaatggc acacgccaca gtacaaaata tcaatcaaaa catcgtcttc
     2641 aagcaattca cggcgttcaa aactgtgtgg ggcaagtggt gtggttgccg aaaaagtggc
     2701 gtaggatttg atagggtaag ccatttttgg ggtttaaatg gctgaaatgg caattactat
     2761 agtgccgatg atttattatt gaaaatcaag atttttgata aatcggtatc agttaaaatg
     2821 ataattgggg gttttcagac tgactgaaaa attattttgc ccattttaaa aacaaaaaca
     2881 ccgccctcat cacaaaagcg gtgtttttca tcaaaattgt gtcaaagcat actctgccaa
     2941 ttctgtaagc acttcatcag caggacgctg agtgggtttt aaattgagtg ccaaatgttt
     3001 cacgcctttt tcttgttctt ttgcccaaaa gtctgccaag ccttttgcac caccacgcag
     3061 ataaatgttg ttaaataact gtgctttggc gtttttgtcg tccaaaactt ccacaaattg
     3121 agcatagcca aatgctgtgg gggtgtcttt ttggcgtaaa tcggcaaggg tgttgatgat
     3181 gtttgcggtg tcggcaggat tcacaccgtg ccaaatccac gcatcaggta cattagcaag
     3241 ccagtccatt tcttgccttg ctcgtccaat cgccacaatg ggcaagcggt gtttgggttt
     3301 ggggagcaaa tccaaattgt ctgttaaatc ggcataatgt ttgcctttga aatggggaaa
     3361 atcctgctcg gttaaggtgt taatcaaatc aatgctttca cgaaaacgct cgctacgaga
     3421 ggcaaaatcc gccccaaatg cagggtattc cacaggtcta tcgccagagg ataagcccaa
     3481 taaaaaccgt ccatgactca aactatccac acttgtcgcc attttggcaa tgtgaatggg
     3541 actacgcaaa ggggcaatca gccctgccgt gccaagggcg atgttttggg tgtgggcgga
     3601 caaaaaacca agtgtaacca tcgggtcaag cccttgcccc acatcgccaa aatgagggtc
     3661 ataaaacggc acatctcgta cccacaatgc tgaaaagccc aagttttcag ccagccgtgc
     3721 attgtcggca atggtggtca aattgtctgg aatgtgattt tgatagccca taaagggggc
     3781 aattaagccc agtgttaatt gattttgccc aaaaacttgg gagaaaatgg gggaaagcgt
     3841 gttcattttg gcgtacctgt cttatttaag ataaggtatt ttaagggctt ttgagtttgc
     3901 ttaaaatggg ataaattgag aaagtgtttt gctaaattgg cataaataga cgctttcaag
     3961 ctgactgaaa atttgcaaaa tttttaataa atattatcag taataacgag taacaaaaat
     4021 tacttatctt tcaatctatt ataagtgatt tttatgtaaa cgttccgaaa aaatgcaaaa
     4081 tgttccgaaa ctgtctttta agactggtgt tttgaggagg gaacactttc tttgataggg
     4141 gttactattg gggcttttcg aatgtatgtt ttggtcattt gaacgctagt atgacctagt
     4201 tgttggcgag cggcttcttc acctagagaa agggctttat ctgttcctga tttagctctt
     4261 agatcccgaa attggaatgc cattatttca tttgcgtatt ccgggttatt cttgaccgct
     4321 tgttcccgaa tataagtgaa ccttttacct agttttctag cggttagctt ttcccctttc
     4381 ttagtgctga ataagtgtgt tccagtagct ttctccagcc tatcttggat aatatcagcc
     4441 agttttccca ctatctcaat acgtagtttg gcttgtgttt tttgctgaac aatatggaga
     4501 taaccatcaa aaatgtgttc tttccggata ttgaccaaat cgacaggacg ttgtccggtg
     4561 atataggcga gatccattaa gtctctcata tcctgatctg ccacttcata taccatctga
     4621 aatatattgt tctcaacgta aatttcacgc tttctgatag ggtagcgttt cattccgata
     4681 ttagggcttg gtaagtttgt ataaccccac tctcgagcgt attgccaaat atgactgaac
     4741 attgaaaatt cgttattagc agatcccggt gtgtcttttc gccaagtcat atactctcgg
     4801 atatgttgag gggtgatttc ttcgagagga gcgtcattaa agaatagcag tagatttttt
     4861 atcttgcaca aatctgtttg tgctgtgctc gcttttttct gaggtataac ttcatctcga
     4921 taacgtttgg ctacaagccc gaaggtaatt ctggcagttt ggctttctct ttctatattg
     4981 agttgagcag ccttaataaa agcctcattt ctatttgtgc ctagagagat ttccgttttt
     5041 ccgtgcgtgc gatatagcca ataaatgaca gttttgcctg attttcgtgt aactgttttt
     5101 ggacgtaaat tctcaggtaa gtagcgattc tgttgtttgc gtggtcttcc catttttcac
     5161 tcccattaaa taagcaggtg atttccattt cccagtggat tgagcttctg gatattgttg
     5221 gcgggggtgc ccatagacat ctttgtatag cactaatggc ttatacttgt tttcatcttg
     5281 aattatatag tgacgctccc tcaaccattc gatttgtctt ttcttttgac gatagcctgt
     5341 taaatcagca agttcgtctt tcgttaaaaa ttcagtaggt tgttccatat tctctccaaa
     5401 taaccccctc atttagaggg attgagttaa ataatcgtta agcctttgtc ctatccaccg
     5461 catacaaggg acggccatta taacttttgc catatgtaac ccttgtgcgt tttgcgttta
     5521 ccctgaatgc aaaggctgat ttttgaatgt gagaaaccat ctttacctgc acttgtcatt
     5581 gaggtgtatt ttttgaataa tttcccgtcc agagttattg cggcaacagg aactgagcaa
     5641 ctctcaatat tcattttttt catcctctcg gactgcttgc taaaacctcc aagtcttgag
     5701 caatgcaaca tattttctga gcgtgtacac cactctaaat tttcaggtcg gttatttgtt
     5761 ttgtctctgt ccttatgatt tacatgtaga tctggataac cgtgaaaagt ttcgcatacc
     5821 agtctatgga ttaaatagtc ttttactcca ttctcatcta caagctgaac tcttaaataa
     5881 ccattcttta aaggtctagg ttttaagatt ttgttgctca agaaactaaa aatttctcca
     5941 ttctcggtag ctgcatagtt ttcattgcga ggtaagatac gcacttaatc tctctcctat
     6001 ccatttcatt acatttgtac acatcgaatt tcctatcgcc ttatatcgtg ggctatcagg
     6061 gcattcttcg gcagatttgc cacggtatgt gattttcgtc cagccgtctg gaaagccttg
     6121 tagtctctcg cattcggtgg gagtaagttt tcgaatagtt gttccagcac tgacagcgtg
     6181 aacatcagtt cgggtaagca tgtaacttac accactctca tcaaatacgt tgccgtttcc
     6241 gtcgttttgt ggctgtctgc cgatagtatt accggcaagg gcaatacaag ggatattatt
     6301 tccacccgtc cccattcttg ctttcagtgt tggcgttttg tcctgaattt cgctaattcg
     6361 tacagcttca gcacctttta cttcaaataa gacgttctct tgcccgttgt ttcgacctaa
     6421 acaatgagct ttgttttggc tgataattgg atcttgcgta ccgtgaacaa ctagcgtctc
     6481 actcccgcca ctcaaagcct ccccctgatg ctttaactgt accgcctttg tcagattggc
     6541 agttatggac aacggcatta tttaagatgt agctgttgtc atctgccacc tcaatgttat
     6601 aaacaacttc atttccagtt atctcaaagg attgcacgct tctcaataat ctattttcat
     6661 caaggcgact ttttcttgat gtcgattgga ggaacgctcg catttgataa tagtcattct
     6721 gattgacaat tcttccttgg atttcttttg tcggagcaac agttactttg gaaacagatg
     6781 agatatatcc taaggtttgg gataatgcag caatgccgta agcaagggat ttcgaaatgc
     6841 tatttgcggt ataaactccg tttctaaaag agccatcggt aatcatatac ccttcaaaaa
     6901 ttttacttct gaaagaatga gataaacacc aagccggtat agtttttccg ccggctttct
     6961 caccaaattg cgaataaaga aaatcagcaa gttcagtgtc acaaatagtg attttaatta
     7021 ccgaattatt ttcggtagta atatgatgag gaagtttggc aaaagaaaga gaaaacttcc
     7081 gatatttctc tttatttaca gaaataacaa cagctttttt atttttgcct ttccatcttc
     7141 ttatccagcc atcaccaaga taataaccgg caattagaag gacttcgtca tcagtcagtt
     7201 tgctatgaaa accaccatag ggcataactg aaaaatcagt taatgatacc cattgatagc
     7261 cctctagctt atgagcctca atccactcag gtttggaaat gatagttttc ctatggtatt
     7321 ttccattcct tttggtgttt atcgtttgcc atttttgagc ataaaaagga tgttcagggg
     7381 tgcaaacgat tgattcaggt aagccaacag ccgttaattt tccaactggt tttatttcac
     7441 tgccaacacg caaaataggt tttagttgtc ctttatgagt aacaactaaa tctccgacag
     7501 aaagtgtttc gattggcata tatcctttat ccgttaaaac catatgccca gcggtaaagc
     7561 aaggcgtacc cccaaccaac acatcaggag caggaatttt acgattgagg attttttcag
     7621 gtagggcggt catatcgccc aagttcggca catcggggaa acggtgagca agcactgcac
     7681 acggaaacgg ctcaatctcg ctgaaccata acggcgtacc gatgtcgtgc cacgctacac
     7741 ttgctgcctc aatgccggag cagatagatc cataggtgaa ttttattatg ttgttcatac
     7801 aatcttctcc gcctgcaccg caacgcaaat atcatcaata aatgcgttaa aagtgcggcg
     7861 taattctggt tcaaaaaatt ctgcgatcag cttggataag cgaacctcgc cgacaattcg
     7921 ttcaatcgct tgctctcggg caaacgcctc taattcaagc ggttttatct cttcttgtgg
     7981 cggtggtggc ggttggatac tttcccaatg atcaggtcta attttccatt tatcagcaca
     8041 aatttgttga atttgcccac cagcacaatc gattaactcc cgagagcaat catcggtcgt
     8101 tttggttttg tctaccacca agaataggac ttcaatcggg gtatcctcaa aggcgttttg
     8161 gatgcggttg agttctacaa gttgattgcc aacttcttct cgaaagcgtt tttctgtttg
     8221 gcggtagcca acgccgggaa agagaatgaa aaatccccat tggtgactat ttgccagtcc
     8281 ttttaggacg aaaatatcat caaccacccc agattttttc cacggaaatt cggattgaat
     8341 ttgtgcttgt tcggcttggc ttaaatcctt aaatttaagg gaaaatggcg gattcataat
     8401 cacgcaatcg cacggttcgc cgttaggata gagaaagaag ctctgattat agatttgagc
     8461 cgtagggaaa ttgtgccgta acacatcgca gctttcggat tggacctcta ccgcagtaaa
     8521 agaggttggg cggacaaatt gctccaactg cccagaacct gccgccccgt caaaaacaga
     8581 aacattattt ctggcatact gcttgacctt ttcagcaaca taacggcgta gagcttcacc
     8641 tgtgatgtat tcagcgaatt tgtcggcttt tttgcggtta ttgtgttctt ggaattgcat
     8701 ttttcctcca aaaaataacc gcttgcggaa caagcggttg ggttaattag cgttgagctg
     8761 tacaaatttt gccatcgcag tcgttgcgta actctagatg gtcagcagca actgcaaagg
     8821 cggttaaaaa gagtatgatt tttgcgtatt tcatcgtcta atcctcaaaa tttgggtgca
     8881 ggaaaccgcc gcttgatgtt tcgcaagcgg tcgggtttta taattttttg tgattagaac
     8941 gttggctttt taaatgccgg gtcgaaacct cgaacgtgtt tgagtactcg ccagtttgtc
     9001 atcgggtcgt aatcaaattc tttggtaatc cgttcaagaa ttttatgagc cgattgtgcg
     9061 gtgtggctat attcaaaacc ctgtccgtag atttcaggtg cgatatttga gccgagtttt
     9121 tgaaacatcg ggtagatata gcggaaagtg tgaatgccac gcacgaaagc gaaccaagcc
     9181 catatgaggc tttggagttc atcttcggta aagtcgaaag agtatttctt tggcggtggt
     9241 gcaagcggta ggttttgctg attattttgc aacgcatatt taccagtctt gcgaatttgt
     9301 ggcagaactt cttcaaatac ccacgcttca aacttttccg cttctggttt gcgtgatttg
     9361 ataatcagtc ggtataggtt tggttcgttg atgaagatcg ctttttgttg tctctgcatt
     9421 ttatcggtga ggtatcgttt cgatacccca ttttctttac agtgtttttg cagagtaagg
     9481 ctttcattta cataacctaa aattcggcaa acatctgcac cgcaaaacca cggttcttga
     9541 tttggatcga taatgacacg aacagcagat gaattgaaat tgaaaacagg gaattgaact
     9601 tgatttgaca ttttttgtac cttttggatt taagtattta atccgatcat taagtgggtg
     9661 atcggggttc aacttaccct ccaaaagatg ggcggagctt attcagatgt attgtatatc
     9721 gctctctcgc cccgatcatt tcggattaaa cctaaaattt aggtacaaaa aaaccgcttt
     9781 atatcggagg cggaaaccgc ttttggaaag taagtgtggt tatcttagcc gaaagggcgg
     9841 ttttttgtca attagatttt attcttcaat tagcaatggc ttttctttca gttcttcaat
     9901 cgctctggtt tgtaacagcg agctcatttg ctgaatagcc aaacggttga gcattgccag
     9961 tcgctcttct tggctgtaac cttgctcaat tagtagggcg ttttggcttt ccaatgcagc
    10021 aaggacggta agttgctcaa cggtagcgtg gtctcgcata ttgcctttca ggttcggatt
    10081 gcggtctttc cactgttttg ccgtttgtcc gaagagagct tgattgagaa tgtccgcttc
    10141 gctggaataa acgaaagtat gttgttttgt attcagcaat gccggtatga tgtgagcttt
    10201 gatggcatca gtatgaatgc ggtagttcgc cttgcttaaa atgcgtttta cgctccattc
    10261 gagcttactt tcgttcgctt cttgctgttt gagtcgttgg aactctttga tgagataaag
    10321 cttaaattct ggactgagcc aagaaccaaa ttcgagagca atatctttgt gggcgtaagt
    10381 gccgctacca tatcgtcctg cttttgctac tagcccaata gctcccgttg cagtccattt
    10441 tttgacagac atcacaaagc ggtttaagcc gatgttgttt ttaatttggt gtaattccac
    10501 caaattaaaa tttggattat tcagctcttc ccaaacttga agaaattcaa tggtattttt
    10561 attttgaagc cagtttttaa tgagctggtc actgtctcca aaagctttgc acatatcagt
    10621 taggctgatg taatcctcac catcacgagc ggttactttg acctccacgc cttgtacaat
    10681 cattacgcta tttgccattt cgtttctccg tttttaggta caaaaaaagc cgttggtgga
    10741 cggcttgaaa gtgcggttat cttaatccga attgggggcg gtgtcaatta gattaatccg
    10801 tataagtatg gaaccaagtt aaagagtaga actacaacac ataaccaaaa aatgaaattc
    10861 atatcttgct cagttttgat tttgtgtaaa atacgcttaa gtttgttttt catttaggaa
    10921 acctttaatg tttagtttat tgcgtgatgc tttaaccttt gctgcaatgt ttacagggat
    10981 tttatttcct gcaattattc ataaatacga tctatcactt ggtacacaaa tccaattact
    11041 tagctttgtt ccagctttct ttgtgttgtg ccattttctt attaagcgaa aatatcaacg
    11101 tgattttgac agactttcgt atttatctgc tgtggtttgc gtagcaatgt gtgcaggcgt
    11161 tggagcattt agccaatcag aaatgattga gctaggtttt aaagttgagc gtgttcttga
    11221 ttatgtgact atcaaattct tactctactt ttggagcttg ctgttattgc cagttgtgct
    11281 aagaaaattg tttgggaaag attagttggt tatttaaaga gagctatttg tcaaacctca
    11341 atatctattt ttgcgatctg catcgaaaaa ataaattttc gttctgacag taaaacgctt
    11401 tcgtagtaat ctcataaaaa acataagg
//
LOCUS       DANLTI010000087        11404 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.087, whole genome shotgun sequence.
ACCESSION   DANLTI010000087 DANLTI010000000
VERSION     DANLTI010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11404
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.087"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(6..491)
                     /locus_tag="PXB09_001845"
     CDS             complement(6..491)
                     /locus_tag="PXB09_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233933.1"
                     /translation="MIQNDPRDAIILSLLANAVYGGHNNSQISYQETEEVNLYARLRQ
                     VEGDVREIKSNYLTKEAFYKAGGSTLIALVVTAGIALWTVYSHLDTKVEARFSKIDDK
                     FVQVETNIKNLDIRLTKVESRLDNVEQRLDNVEQRLGNMEKKIDGVDNKLDLLLQQFK
                     R"
     gene            complement(496..876)
                     /locus_tag="PXB09_001846"
     CDS             complement(496..876)
                     /locus_tag="PXB09_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233934.1"
                     /translation="MNNKRIKPEQFADFITQRTGRNLTCPICNSQEHYLHDGYDTFTE
                     LCGEKIIGVPTIPYRIEPSPDEVMKFAAPEFHSLHFNEREGTKYWLDQKARTAVIVTC
                     VCCNNMLFFDRERILEWIKGSQNE"
     gene            complement(927..1586)
                     /locus_tag="PXB09_001847"
     CDS             complement(927..1586)
                     /locus_tag="PXB09_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDL5233935.1"
                     /translation="MTTLGSRIKAYREQLGISQYEVAERCTSIDNRDKNNKWGQSRIA
                     NYERNNRTPDLDDIEILSKVLGVSPETLAFDTNVQLARPTKSNSYPLISNIQAGLWTE
                     AFDFKDSEGYDYIDTEIDAGPDAFFLRISGMSMEPKFSEGDLVLIDIRKRPHPGDYVA
                     AVNGTGEATLKRYRELGEWSESGNPHFELIPLNPDFPTLSSMKQDIRIIGVAVEHRSY
                     L"
     gene            1716..1922
                     /locus_tag="PXB09_001848"
     CDS             1716..1922
                     /locus_tag="PXB09_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5233936.1"
                     /translation="MNKIAEIRNQIGISQAQLAVQIGWGQPRIANYETGNRTPSIYVA
                     QKIVEGLNELGANVRIDDVFPVGN"
     gene            1943..2203
                     /locus_tag="PXB09_001849"
     CDS             1943..2203
                     /locus_tag="PXB09_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233937.1"
                     /translation="MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTF
                     ADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT"
     gene            2367..2537
                     /locus_tag="PXB09_001850"
     CDS             2367..2537
                     /locus_tag="PXB09_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233938.1"
                     /translation="MKNQRNDTQKSSLWQEFEYRKRLKNLIESGLSVAEIETRSQQIY
                     EELKSECTTEAN"
     gene            2512..3381
                     /locus_tag="PXB09_001851"
     CDS             2512..3381
                     /locus_tag="PXB09_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5233939.1"
                     /translation="MNAQPKQINPILKLHPKQSEAKKVSVDDGYTQIPNELLKAILRS
                     GVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTKYHINQLSAARKELIRE
                     NILFEDGKETGVNLSVFEWKMVYPEKVGSSRNNRELIPEKVGNGYPEKVGNTKETITK
                     EKINNEFTNVNSVQQPETSLPKKTKSEPVDYQGVMEEFNRAVEDTPIPQIRAMSDERK
                     RSVHALAKILRKEFGGYTRQHFADYFNDFVRQASSRKDRFYFGGLDGSAWVANFGYII
                     RSKTFYKTWEDSL"
     gene            3378..4739
                     /locus_tag="PXB09_001852"
     CDS             3378..4739
                     /locus_tag="PXB09_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HDL5233940.1"
                     /translation="MSQNLKNITYEVEYLLVGALLKSGLNSKARDVLSWLEPEMFATF
                     QLGVIYEAIRKQALKDNVIDMLLLNTDYGQDFATLAEIMKNTISGANLDGYAEKVRQY
                     HQRREAQRVFLDVAGELQNARDEQLDAITSTGLAHLSKLLQRGGKVKPIDMNDLLEGY
                     LELFQERAKPSFKERLLFTGIEALDGKLGGINDTDICIVAGRAGNGKTETAITFTKNI
                     IENKGSVLFFSLEMSKEQIMDRLIASASGVNSVKLRNPEMMNDEDFARMGTAIQPLQN
                     QQLYIVDKSGLTAEEIVAIAESHIQEYGKVSAVVIDYIGLVRHGKLDGKINRTYQIGE
                     SMERFKTFCKNNHTPMILLAQLNRNADGSRPTNADLRDSGSLEQDASQIIMVHNQRNK
                     DGEPAPYTEWIVTKNRFGANGTVYMQFQQGRFVECDQAEAREYFQPKETKTSSNKRYG
                     AMQ"
     gene            4736..5272
                     /locus_tag="PXB09_001853"
     CDS             4736..5272
                     /locus_tag="PXB09_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HDL5233941.1"
                     /translation="MTDFDKNIKYKIIYADPPWKYKDSGCNGSAENHYTTMNIKEICD
                     LPVQDISDKDSILFLWVTYPMLPEGLKLIEAWGFNYKTIGFQWVKTNKKNKNSFFFGL
                     GRWTRGNTECCLIATKGKPSRVSNKVSQLIIEPIQHHSKKPDIVREKIVELMGDLPRI
                     ELFARNKTQGWDVWGDEV"
     gene            5363..5578
                     /locus_tag="PXB09_001854"
     CDS             5363..5578
                     /locus_tag="PXB09_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233942.1"
                     /translation="MITYKCPKCNGELEDLSINDEWGWFLDEPYRCNGHYTGRFPNIS
                     RDSTLNRTKSCGYFSKEEVKKVNGTQR"
     gene            5562..6068
                     /locus_tag="PXB09_001855"
     CDS             5562..6068
                     /locus_tag="PXB09_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL5233943.1"
                     /translation="MAHSVNDIVKAHGRRYKARLKIQMIKMQGGVLVPLNEREAEALV
                     SLKNGEQYEIEVIRTRNPAFHRKVFAFLNFCFEYWSADKTEWEFFDERKQFDTFRKNL
                     TVLAGFKEITYTLDGRMRVEAQSLSYGNMEQDEFEQVYKALINAAIKHVFNNTKDENR
                     INQLYSFF"
     gene            6118..6330
                     /locus_tag="PXB09_001856"
     CDS             6118..6330
                     /locus_tag="PXB09_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233944.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLFFLVILTVRYVGYLLIYPLAFFAA
                     VGSFIVFCQWTYQEWLYYFKRGFAPI"
     gene            6376..6570
                     /locus_tag="PXB09_001857"
     CDS             6376..6570
                     /locus_tag="PXB09_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233945.1"
                     /translation="MTKFFETIAFVMLFGIIPSCLLAINTTLMNMNIKNAPWFMVIIQ
                     LGFNITCYWLWFISVMRNVI"
     gene            6698..7267
                     /locus_tag="PXB09_001858"
     CDS             6698..7267
                     /locus_tag="PXB09_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HDL5233946.1"
                     /translation="MANKPPKQHKCKECGSYYIKFQSTQQVCSVKCAMAMGKRKTEAK
                     RKKSAKIDRLEQRKRLEKLKSRRDFEKDLQKIFNKFIRLRDKDLPCISCGRYHQGKYD
                     AGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNLIEKIGLERVEFLERKD
                     HPPLKLTIEQIKDLIKVYKAKCKELERVT"
     gene            7257..7730
                     /locus_tag="PXB09_001859"
     CDS             7257..7730
                     /locus_tag="PXB09_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233947.1"
                     /translation="MLPRKIKNKWLEPEKQKWIEELLRLWGAWEFGGLDLESRVNMIY
                     RLMKSAEGVKSLSSREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIA
                     IYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSSNSTDKLKKYQFSP"
     gene            7958..8033
                     /locus_tag="PXB09_001860"
     tRNA            7958..8033
                     /locus_tag="PXB09_001860"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7991..7993,aa:Trp,seq:cca)
     gene            8050..8235
                     /locus_tag="PXB09_001861"
     CDS             8050..8235
                     /locus_tag="PXB09_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233948.1"
                     /translation="MYNLDDAIQECREKFGEDKPYFSEAGTLTFAGCKALSRLRDEKL
                     GIKAPPNFPFPRVEDLS"
     gene            8261..8431
                     /locus_tag="PXB09_001862"
     CDS             8261..8431
                     /locus_tag="PXB09_001862"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233949.1"
                     /translation="MTEQLNTQSKSGEEDQEKSQDRYAVGWPSRRISDCVQHFRSRKI
                     YPFASNNDVKQG"
     gene            8574..8819
                     /locus_tag="PXB09_001863"
     CDS             8574..8819
                     /locus_tag="PXB09_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233950.1"
                     /translation="MKLMKDMGTQSYIWSGFSTWLAWLGEQQNLMLLSLAIGIVTAIA
                     GLIQRFDEWRRRKREDERAEELHQAKMARLRKGLSDE"
     gene            8812..9381
                     /locus_tag="PXB09_001864"
     CDS             8812..9381
                     /locus_tag="PXB09_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5233951.1"
                     /translation="MSKSLKYGSGIVCGIAAIITLVQYQHPEIRTNQAGLEIIGNAEG
                     CRRDPYKCPADVITVGIGSTEFGGEKIDPNRIYSDKEIAERWAKDLKIAESCVNRHFN
                     GKDMNDNQFSGMTSAVFNMGCYNMRFYRNKQGQYVQTTIHKLAVNKQFEEMCHRLPDF
                     IRASGKVLNGLVIRREKEKALCLTGLVAR"
     gene            9354..9704
                     /locus_tag="PXB09_001865"
     CDS             9354..9704
                     /locus_tag="PXB09_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL5233952.1"
                     /translation="MLNWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLHQQNNHKH"
     gene            9709..9882
                     /locus_tag="PXB09_001866"
     CDS             9709..9882
                     /locus_tag="PXB09_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233953.1"
                     /translation="MYPPAAYLVPCGRTEFSGRTYGDTVEYLVKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            10274..10798
                     /locus_tag="PXB09_001867"
     CDS             10274..10798
                     /locus_tag="PXB09_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5233954.1"
                     /translation="MTKKGEVKATSKGVGKLTDKQKRFVEEYLIDLNATQAAIRAGYS
                     EKTAYSIGEENLRKPEIRSAIQEAQNKRSERTQITQDDVLNGLLEVIAMSTGKKIVTE
                     TDVAKNDNGELVGFDIAKTKFEPAAANKALELLGKHLGMFKDKVDLINSDGSLNRPMV
                     IELIAPSLDDESTD"
     gene            10782..>11404
                     /locus_tag="PXB09_001868"
     CDS             10782..>11404
                     /locus_tag="PXB09_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5233955.1"
                     /translation="MKAQIELPPKLLPVFAKDYRYKGAYGGRGSGKTRAFAKMSAVSA
                     YKRAMRGESGVILCGREFMNSLEESSLEEVKQAIKSEPFLANFFDVGEKYVRTKDGRI
                     SYVFSGLRHNLDSIKSKARILIAWIDEAETVSETAWRKLIPTVRENNSEIWVTWNPEN
                     RGSATDTRFRQNPPENSCIIEMSYQDNPWFPDVLEQERLNDKQRLDDA"
BASE COUNT         3653 a         1956 c         2581 g         3214 t
ORIGIN      
        1 ttattttatc ttttgaattg ttgtagtaac agatcgagtt tattatcaac cccatctatt
       61 ttcttctcca tattgcctag tcgctgctca acattgtcta gtcgttgttc gacattatcc
      121 aatctagatt caactttagt gaggcgaata tcaagatttt tgatattggt ctctacttgg
      181 acaaacttat catcaatttt cgagaatcga gcttcaactt tggtgtcaag gtgtgaatat
      241 actgtccata atgcaattcc agcagtaact actaatgcaa tgagtgtaga gccaccagct
      301 ttataaaaag cctctttcgt caaataattt gacttgattt ctcttacatc gccttcaact
      361 tgtcttaatc gagcatataa attcacttct tccgtctcct gataactaat ttgtgaatta
      421 ttatgcccgc cgtatactgc atttgcaagt aaggatagta tgattgcatc tctaggatca
      481 ttttgaatca ttggtctatt cattttgtga gcccttaatc cattctaaaa ttctctctct
      541 gtcgaaaaaa agcatattat tacagcaaac acaagtgaca ataacggctg ttctcgcttt
      601 ttggtctaac caatattttg ttccttcccg ttcattgaaa tgcaaagaat gaaattcagg
      661 agctgcaaat ttcataactt catcaggaga tggctctatt cggtatggaa tggttggaac
      721 accgataatt ttctctccgc ataattccgt aaaagtgtca tagccatcgt gtaaataatg
      781 ttcttggcta ttacaaatag ggcaagttaa attccgccca gtacgttgcg tgataaaatc
      841 cgcaaactgt tcaggtttaa tgcgtttatt attcatttta acttcctttc tacccaataa
      901 aattcaactg ttagctttgg tggactttac aaatagcttc tatgctcaac agcgacacca
      961 ataatacgaa tatcttgttt cattgagctg agtgttggaa agtcggggtt aagcggtatt
     1021 agctcaaaat gaggattgcc ggattcagac cattcgccta actcccgata acgttttaaa
     1081 gtagcctcac ctgtgccatt aaccgctgct acataatcgc ccgggtgagg acgtttgcga
     1141 atatcgatta acaccagatc gccttcacta aatttaggct ccatcgacat tccggaaatt
     1201 cttaaaaaga aagcgtccgg tccggcatca atttccgtat cgatatagtc gtagccctcc
     1261 gaatctttga aatcaaaggc ttctgtccat aaacccgctt gtatattgct gatcaacgga
     1321 tatgagttcg attttgtcgg tctggcaagc tgaacgtttg tatcaaaagc aagtgtttct
     1381 ggagaaacac caagcacttt gctgagtatt tcaatatcat caagatcggg agtacgattg
     1441 tttctctcat aattagcaat gcgagattgc ccccatttgt tatttttatc tcgattatct
     1501 attgatgtac atctttcagc aacttcatat tggctgattc ctagctgttc tctgtaagcc
     1561 ttaattctac tacctaaggt tgtcatagca ctctcctatt agattttcct cattttaaca
     1621 cgctccgtta tatccttgtg aatcacaaaa tgaaatttac aattagttca ttttgtgatt
     1681 taattaaaag atataaatca caaagagaaa tttgtatgaa taagatagct gaaatacgaa
     1741 accaaattgg tataagtcaa gctcagttag ctgttcagat tggttggggg caaccaagaa
     1801 tagctaacta tgaaactgga aatcgtaccc catctattta cgttgctcaa aaaattgttg
     1861 agggattgaa cgaattaggt gcaaacgtac gaattgatga cgttttcccc gttggcaact
     1921 aatttacccc aagaggcttg caatgccacg caatgaatta acaaaaaatg caagagcgat
     1981 tgcggatttg attcatcgaa aatccgcaac ggtgacgcat aagaaactag caagagcaat
     2041 cggactgagt gaatcacaat ttagccgtac atttgcagat aatgtggaaa tggtggcggt
     2101 gattattgat tacttaagta ttgagcttgc ggataaagac gagttactag agctgaaaga
     2161 gaaacgatat aagcgaataa atctcgaaga agcgacaaca tagaagttac caacaatgaa
     2221 aaatttttta gaaaaattca aatcattcta ccacagtaaa aattcaattt ttattagagt
     2281 ggcaattttt atgctgcttg cgtggtgggt ttttaacaat taaaaaacca ccgctggaac
     2341 ggtggtaatt tacaaggagt taccttttga aaaatcaacg caatgataca caaaaaagct
     2401 ccttatggca agagtttgaa tatcgaaaac ggttaaaaaa tctcattgaa agcggtttat
     2461 ccgtagccga aattgaaacc cgttcacaac aaatttatga ggagctgaaa agtgaatgca
     2521 caaccgaagc aaattaaccc aattttaaaa ttgcacccta aacaatcaga ggctaagaaa
     2581 gtgagtgttg atgatggtta tacacaaatt ccgaatgagt tattaaaagc aattttgcga
     2641 tcgggtgttt taggttggaa aggctcttac ttactggcta ccgtcttaaa aacattgtct
     2701 tggcataaag aaagtgattg gttcacgcat tcccaagtgt gtgaaatgat gaatattgag
     2761 ccgacaaaat accatattaa tcaactttcc gctgctcgaa aagaacttat ccgtgaaaat
     2821 atcttgtttg aagatggtaa ggaaacaggg gtaaatctca gtgtttttga atggaaaatg
     2881 gtatatcccg aaaaagtagg gagttcccga aataataggg aattaattcc cgaaaaagta
     2941 gggaatgggt atcccgaaaa agtagggaac acaaaagaaa ctattacaaa agaaaaaata
     3001 aataatgaat ttactaacgt aaattctgtg caacagcccg agacctcttt gccgaaaaaa
     3061 acaaaatctg agccggtcga ttatcaagga gtgatggaag aatttaatcg tgctgtggaa
     3121 gacacaccga ttccgcaaat tcgggcgatg agtgatgagc gaaagcgatc ggttcacgca
     3181 ttagcaaaaa tcttgcgaaa agaatttggt ggctacacca gacaacactt tgccgattac
     3241 ttcaatgatt ttgtccgaca ggcaagtagc cggaaagaca gattttattt tggcgggctt
     3301 gatggctcgg cttgggtagc aaatttcggc tacatcattc gttcgaaaac gttttataag
     3361 acttgggaag attcgctatg agccaaaatt tgaaaaatat cacttacgag gttgaatatt
     3421 tgctggttgg agcattgctg aaatccggtc ttaactcgaa agctagggac gtattgagct
     3481 ggttagagcc tgaaatgttc gctacctttc aacttggggt gatttatgag gctatccgca
     3541 agcaggcgtt gaaagataac gtgatcgata tgctgttact caataccgac tacggacaag
     3601 attttgccac gttggcagag ataatgaaaa acacgatcag cggtgcaaac ttagacggct
     3661 atgcagaaaa agtccggcaa tatcatcaac gccgagaagc ccagcgagtg tttttagacg
     3721 ttgcaggtga gttgcaaaat gcccgagacg agcagttaga tgctatcact tcaaccgggt
     3781 tagctcacct aagcaaatta ttacaacgtg gcggaaaagt gaaaccgatt gatatgaatg
     3841 atttgctcga aggttatttg gaattgttcc aagaacgtgc aaaaccaagt tttaaagagc
     3901 gtttgttgtt taccggtata gaagcattag atgggaaact aggcggtatt aacgataccg
     3961 atatttgcat tgtagcagga cgtgccggta acggtaaaac cgaaacagcc atcacgttta
     4021 ctaaaaacat tatcgagaat aaaggttcgg tgctgttctt ctcgctggag atgagcaaag
     4081 agcagattat ggataggctg attgccagtg caagcggtgt aaattcagta aaacttcgca
     4141 atccggaaat gatgaatgat gaagattttg cccgaatggg aacggcgatt cagcctttac
     4201 aaaatcagca gttgtacatt gttgataaaa gcggattaac cgcagaagag attgtggcga
     4261 ttgcagagag ccatattcaa gagtacggca aagtgagtgc ggtagtgatt gattatatcg
     4321 gtttggttcg acacggcaaa ctagacggca aaattaaccg aacctatcaa atcggtgaaa
     4381 gtatggagcg gtttaaaact ttctgcaaaa acaatcacac accgatgatt ttattggcac
     4441 agcttaaccg caatgcagat ggcagtcgcc caaccaacgc agatttgcga gacagtggca
     4501 gtcttgaaca agatgcaagc caaatcatta tggtgcataa ccaacgcaac aaagacggcg
     4561 agccagcccc ctatacagaa tggattgtta ctaaaaatcg ctttggagca aatggcacgg
     4621 tttatatgca attccagcag ggtaggttcg tagaatgcga ccaggcagaa gcgcgggagt
     4681 atttccagcc gaaagaaact aaaacatcat caaacaaacg ctatggagca atgcaatgac
     4741 agattttgat aaaaatataa aatacaaaat tatttacgca gatccgcctt ggaagtataa
     4801 ggatagtggc tgtaatggga gtgcagaaaa ccattacaca acaatgaata tcaaagaaat
     4861 atgtgattta cccgtccaag atatttcaga caaagattct attctgtttt tgtgggttac
     4921 ttaccctatg ttacctgagg gcttaaagtt gattgaggcg tgggggttca actataaaac
     4981 aatagggttt caatgggtga agacaaataa gaagaataag aattcttttt tctttggctt
     5041 gggacgatgg actagaggta ataccgaatg ctgtttaatt gcaacaaaag gaaagccatc
     5101 gagggtaagc aataaagtga gccaattaat tattgagcca atacaacatc atagtaaaaa
     5161 gcctgacatt gtcagagaaa agatagttga gttgatgggt gacttgccaa gaatagagtt
     5221 gttcgccaga aataaaaccc aaggttggga tgtttggggg gatgaggtgt gattgtttca
     5281 agctattgtt acccaaagtg cggtagggtt ttattaaaaa ggttggcggt tgtgaaggat
     5341 aacgaaggtt gggacggttt agatgattac ttataaatgc cccaaatgca acggagagct
     5401 tgaagattta agtattaatg atgaatgggg ttggttttta gatgagccgt atcgttgcaa
     5461 cggacactat acagggcggt ttccaaacat tagccgagat agcacgttaa atcgcacaaa
     5521 atcctgtggg tactttagca aggaagaggt taagaaagta aatggcacac agcgttaatg
     5581 acatcgtaaa agcccacggc aggcgttata aagcaagatt gaaaatacag atgataaaaa
     5641 tgcaaggagg cgttttagtc ccccttaatg agcgtgaagc tgaagcattg gtatcactta
     5701 aaaatggcga gcaatatgaa attgaggtta ttcgcactcg caatccagcc tttcatcgga
     5761 aggtcttcgc ctttttaaat ttttgctttg aatattggtc ggcagacaaa accgaatggg
     5821 agttttttga tgagaggaaa cagtttgata ctttccgaaa aaatctgact gttctggcag
     5881 gatttaaaga aatcacatac accctagatg ggcgtatgcg tgtagaagct caaagtctta
     5941 gttacggaaa tatggaacaa gacgagttcg agcaggttta caaagcattg attaatgcag
     6001 ctatcaagca cgttttcaac aataccaaag atgagaatag gataaatcag ttgtattcgt
     6061 ttttttaatt aaggcgaaat cgccatattt aattaggttt aattgcagga gattaaaatg
     6121 aaaaagaatg ttattagata ttggcttagc gtgccattca gaattattgc agtgcttttt
     6181 ttcttagtca ttcttactgt tagatatgta ggttatttat tgatttatcc attagcattc
     6241 tttgcagcag tcggtagttt tattgttttc tgtcaatgga catatcaaga atggctttat
     6301 tattttaagc gcggttttgc tccgatttag tgtgtgttta ttaattccct cgaattcggg
     6361 ggaaggagaa gtaagatgac aaaatttttt gaaactatcg cattcgtgat gttatttggc
     6421 attattccaa gctgtttgtt ggcgattaat actactttaa tgaatatgaa tattaaaaac
     6481 gcaccgtggt ttatggtgat tattcagtta ggttttaata tcacttgtta ttggttgtgg
     6541 tttatttctg ttatgcggaa tgttatttaa ggagattaat aagtgagcca gtgcaatgaa
     6601 ctgactgtaa ttttaatcgc catcgctatt cttagtgtat gtgccggttc actctttttt
     6661 attgagtggt ttgataagag agatggtgag ggttggaatg gctaacaaac cacctaaaca
     6721 acacaaatgc aaagagtgcg gcagttatta catcaaattt caaagcacgc agcaggtctg
     6781 ctctgttaag tgtgctatgg caatgggtaa gcgtaagaca gaggcgaaac gcaaaaaaag
     6841 tgcaaaaatc gaccgcttgg agcaacggaa gcggctggaa aaattgaaaa gccgtagaga
     6901 ttttgagaaa gatttacaaa agatatttaa taaattcatt cgcttgcgtg ataaagattt
     6961 accctgtatt tcctgtggcc gctatcatca ggggaaatat gatgcagggc attataaaac
     7021 cgttggtggt aatcctgagc tacgttttaa tgaagataat tgccacagtc aatgtgtgcc
     7081 gtgtaaccga catctgcacg gcaatattgt gaattatcga gtaaatctga ttgagaaaat
     7141 cgggcttgag cgtgtggaat ttttagagcg taaagaccac ccaccattaa aacttactat
     7201 cgaacaaatc aaagatttaa tcaaagtcta taaagcgaag tgcaaggagc ttgagcgtgt
     7261 tacctagaaa aattaaaaac aagtggttag agcctgaaaa gcagaaatgg atcgaagagt
     7321 tgctaaggtt atggggggcg tgggaatttg gcggattgga tttagaaagt cgggtaaata
     7381 tgatttaccg gctgatgaaa tctgcggagg gggttaaaag tctttcatct agagaggttt
     7441 gtaacgatag cctcggcacg ctgatcaatg agatttttac ggtagtcacc aaaagagacg
     7501 taatgttagc cgatatactc aaacaaaaat actggttcgg gcgttcggag cggcaaatcg
     7561 ctatttatta tcaactaagg gacagcgagg gtagaaaaga aagacgatgg caagaaatta
     7621 ttcaagataa atgcaaaaaa gcggaaagaa ttattgcaga tattcttgaa agcaagattt
     7681 catccagtaa ttctacagat aaactgaaaa aatatcaatt ttccccttga ttttagtgcg
     7741 taacaagtgt atattttgtg ctaatggtgg acgtagtata aatgatgttt accaatgtta
     7801 gttaaagacg cagcctgaag taatattcag ttcggaggag aataactaga aacgacgtcg
     7861 agtatagtta tttcagcgtt tgcgtggcag tatgccgacc gaattagttt aacagccctg
     7921 agcagaaatg cttggggctt ttttgtttac ggattttaag ggtgtagctc agttggtaga
     7981 gcagcggtct ccaaaatcgt tggttgttgg tttgagtcca accacccttt ccaaatgcga
     8041 gtaaatgtta tgtataacct tgatgatgca attcaagaat gcagagaaaa atttggtgaa
     8101 gataagcctt atttttctga agctggaaca cttacttttg ctggttgcaa agccctctct
     8161 cgattaagag atgaaaagtt aggaattaag gctccgccaa atttcccttt cccaagggtt
     8221 gaagatctat cttagctaca aaaatcaatg agggattgct atgacggaac aactaaatac
     8281 tcagtcaaaa agcggtgaag aagatcaaga aaaatctcaa gatcgctatg ccgtgggctg
     8341 gccatctcga cgtatatcag attgcgttca gcacttccga agtaggaaaa tttatccatt
     8401 tgccagtaat aatgacgtga agcaaggtta aatgcttctg gtggtacaga gtaaattcaa
     8461 tcatttttac cctctgctag tttatttgtt ggggaacagt attctagcag aatttttaac
     8521 caaagctcag tctcacgact gggctttttt attgcctcga aacggggtgg agtatgaagt
     8581 taatgaaaga tatgggaacg cagagctata tttggtcggg atttagcact tggctggcgt
     8641 ggctcggcga acagcagaat ttaatgttac ttagtcttgc tatcggtatt gttactgcca
     8701 ttgcagggct tattcagcga tttgatgaat ggcgtaggcg taagcgtgaa gatgagcgag
     8761 cggaagagct tcatcaagcg aaaatggcaa gattgagaaa ggggttaagt gatgagtaaa
     8821 agccttaaat atggcagtgg tatcgtttgt ggtatcgctg ccattattac attagtccaa
     8881 tatcaacatc ccgaaatccg cactaaccaa gctggattag agattatcgg taatgctgag
     8941 ggttgcagac gtgatccgta taaatgccct gccgatgtaa tcacggttgg cattggctca
     9001 acggagtttg gcggtgaaaa gattgaccca aatcgtattt attctgacaa agaaattgct
     9061 gagcgttggg caaaagattt gaagattgcg gagagttgtg tcaatcgtca ttttaatggt
     9121 aaagacatga acgataatca attttcggga atgacgtccg ctgtatttaa tatgggttgt
     9181 tataacatga gattttatcg gaataaacaa ggtcaatatg tgcagactac catccataaa
     9241 ctcgcagtga ataaacaatt tgaggagatg tgtcatcgac tacctgactt tattcgtgcc
     9301 agtggtaagg tattgaacgg attggttatc cgccgtgaaa aggagaaagc attatgctta
     9361 actggattag tggcacgata gccattgtga ttttgggctt gtgtgtatgg ttatggggtc
     9421 agtcacagat gatagatagc ttaagagctg agaaccgcgc acaagcccaa accattgagc
     9481 agcagcaaaa agccaatcaa cggctaaccg atagcttaga gcaagagcga caagcggtcg
     9541 aaaaaatcca aaaaattgca aatgagctgc ggaataaagt ggagatggcc aagaatgaaa
     9601 ttacatcaat actggcacaa gacagttgtg ctaaagctga tttgcctaat ggcgttgctg
     9661 atagcattaa gcggctgcac cagcagaaca atcacaagca ctgagtattt gtatccgccg
     9721 gcagcttacc ttgtgccgtg tgggcgaaca gaatttagcg gtagaaccta tggcgatacg
     9781 gttgagtatc tcgtcaaagt gatgggagag cgtgatttgt gtgctaatca aattgaccgt
     9841 atcagagaat ggcaagcaca aaccaaacaa gggtttaaat agctaattat ctaattaacc
     9901 gctattgaaa atgggagcgt aacagctccc tttttgtttt gatggaaagt aaatattaca
     9961 taatttagct atggtttcgg ggttggttgg ataaaacacc gaggaaatac ctaagtgatg
    10021 tgatttatat aaaacaaaac cccgaacatt tgcggtgttc gaggtttttt tattacccat
    10081 tgaaacggaa tgagtaacaa gttatggaaa ttattacatt tttaaccgta accatcaagg
    10141 agattcttat ggaatatggt ttatggcaaa taagcctagc agtaacagtc cctattttgg
    10201 cgttcgtgtc gccaaagctg attaatgcta ttgctaatct attaaatgca atgaagtaaa
    10261 ggaatttaac ccaatgacta aaaaaggcga ggttaaagcc acgtctaaag gcgtgggtaa
    10321 attaaccgat aaacagaaac gatttgtaga agagtatctg attgacttga atgcgactca
    10381 agctgcgatt agagctgggt acagcgaaaa aacagcatac tcaatcggag aagagaacct
    10441 gagaaaacct gaaatcagaa gtgcaattca ggaggctcaa aataaacgct cggagagaac
    10501 ccaaattaca caagatgatg tgctaaatgg gttgcttgaa gtgattgcaa tgagtactgg
    10561 taaaaaaatt gtgacagaaa ctgatgttgc aaaaaatgac aatggtgagt tggtcggttt
    10621 tgatattgca aaaacaaaat tcgaacctgc cgccgcaaat aaagctcttg agttactcgg
    10681 taaacattta ggaatgttta aagacaaggt tgatttaatt aattctgatg gttcactgaa
    10741 tcgaccgatg gtgattgaat taattgctcc gagtttagac gatgaaagca cagattgaac
    10801 taccacctaa actgttgcct gtttttgcca aagattatcg ttacaaaggt gcttatggtg
    10861 ggcgaggttc aggcaagact cgggcatttg ccaaaatgtc ggcagtgtct gcttataaaa
    10921 gagcaatgcg aggggaaagt ggcgttattc tttgcggtcg tgagtttatg aactcattgg
    10981 aagaaagctc tcttgaagaa gttaaacagg cgatcaagtc tgagcctttt ttagcaaatt
    11041 tttttgatgt cggcgagaag tatgttcgca ctaaagatgg gcggatttct tatgtgtttt
    11101 ccggacttcg gcataactta gatagcatca aatctaaagc ccgtattttg attgcgtgga
    11161 tagatgaagc agaaacagta agcgaaactg cttggcggaa attaattcca accgtgcgtg
    11221 agaataattc cgaaatatgg gtaacttgga acccggaaaa tagagggagc gcaacagata
    11281 ctcgcttcag gcaaaatcca cctgaaaaca gctgcataat tgaaatgagc taccaagata
    11341 atccttggtt tcctgatgtg ctcgagcaag agcggctaaa tgacaaacag cggcttgatg
    11401 atgc
//
LOCUS       DANLTI010000088        11255 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.088, whole genome shotgun sequence.
ACCESSION   DANLTI010000088 DANLTI010000000
VERSION     DANLTI010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11255
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.088"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            243..971
                     /gene="ttrB"
                     /locus_tag="PXB09_001869"
     CDS             243..971
                     /gene="ttrB"
                     /locus_tag="PXB09_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL5233956.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVMVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
     gene            973..2004
                     /gene="nrfD"
                     /locus_tag="PXB09_001870"
     CDS             973..2004
                     /gene="nrfD"
                     /locus_tag="PXB09_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL5233957.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            1994..5089
                     /gene="ttrA"
                     /locus_tag="PXB09_001871"
     CDS             1994..5089
                     /gene="ttrA"
                     /locus_tag="PXB09_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL5233958.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            5230..6075
                     /locus_tag="PXB09_001872"
     CDS             5230..6075
                     /locus_tag="PXB09_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5233959.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6188..7585)
                     /locus_tag="PXB09_001873"
     CDS             complement(6188..7585)
                     /locus_tag="PXB09_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5233960.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(7675..8298)
                     /gene="gmk"
                     /locus_tag="PXB09_001874"
     CDS             complement(7675..8298)
                     /gene="gmk"
                     /locus_tag="PXB09_001874"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5233961.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            complement(8411..8884)
                     /gene="gpt"
                     /locus_tag="PXB09_001875"
     CDS             complement(8411..8884)
                     /gene="gpt"
                     /locus_tag="PXB09_001875"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5233962.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            complement(9030..10439)
                     /locus_tag="PXB09_001876"
     CDS             complement(9030..10439)
                     /locus_tag="PXB09_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5233963.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            complement(10635..>11255)
                     /locus_tag="PXB09_001877"
     CDS             complement(10635..>11255)
                     /locus_tag="PXB09_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5233964.1"
                     /translation="ERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKETIEGKVTVRT
                     QSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEGTATYSGKAF
                     NHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQISSTVHGNNPL
                     NLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
BASE COUNT         3035 a         2628 c         2582 g         3010 t
ORIGIN      
        1 aggagattag cgatacctag taccccgagt gatattaatg cgtataaaaa ctttagatct
       61 aaactaaacc atcttattgc tttttaatta gtatcaatgc cctattatct acttgtatag
      121 ggcatttccc ttcatccttg acccaaatca actttcccct tgatatgtgg aaaaccacaa
      181 taccttgccg ttccctctcc gccttagaat acctttgtta tttttaaatt tgtgggggaa
      241 atatggattt aagcaaacgt tcctttttga aagagctttc cgccttgacg gtgggggcga
      301 gttttgtgcc gttgcaatcg gcccaggcgt ttatgccggc ttggcgtgag ggcgatgaga
      361 acaaacgcta tgcgatgctg attgatttgc gtaaatgtat cggctgtcaa gcgtgtaccg
      421 tgagctgttc ggtggagaac gccacgccgt tgcacagttt ccgcaccacg gtgcgtcaat
      481 atgaaatcac caacggcacg caggtggtga acaatgtggt gttgcctcgt ttgtgtaacc
      541 attgcgatca accgccgtgt gtgccggtct gcccggtgca ggcaaccttt caacgtaaag
      601 acggtgtgat ggtgattaac aatgagcagt gcatcggctg tggttactgc gtgcaagcct
      661 gcccgtatga tgcccgtttt atcaatgaag agaccaaaac cgccgataaa tgcaccttct
      721 gcactcaccg tttggaggta ggtctgctgc cggcgtgcgt ggaaagttgc gtgggcgggg
      781 caagggtgat tggcgatttg aacgacccga aaagtcaaat ttcccaactt tatcaagccc
      841 acaaagatga tttgaaagtc ctgaaaccgg aggccggcac cgtgccacac gttttctatg
      901 tggggctaga cgatgatgcc tttgtgagca aaattgacgg gcaaccaatg ctctggacgg
      961 gggaggcgta aaatgattcg tgaagtatta gtggaaccgc aacatatcgt ctggttgccg
     1021 tggattgtgc attatttctt cttcgtaggc gtggcggcaa cggcagtgtt taccgccgtg
     1081 ctgtttgcaa aaaaatcact gaaaccgacc gcttgcgagc tggcggcggt gacggtagcc
     1141 ttgattggct cgattgtcgc ccctgtggca ttgactgccg acctgcacca accgagccgt
     1201 attctgcatt tctacaccga ttttgcgtgg cgatctccaa tggcgtgggg agcgattatc
     1261 ctgcccctgt tcagcgtggc ggtagcgggt tattttgtgc tggcattggc tcaccatacc
     1321 cggccgaacc tgccgaaatg gttagcgtgg ctacagttgc cgatactgca aaatcaaggc
     1381 ttgctttggg cattccgcct gtttgccaca ctcaccgcta tcggcattat cggctacacc
     1441 gtgcttgaaa cctaccaaac cggcacaaga accttatggc acagtgcgtg gctgctgccg
     1501 attatgctct tttctgcgtg ggcggtggca ttggggctta cccaagcggt ctgcaaaatg
     1561 ctgttccaca cccaaaccaa cacggggcta tggacaaaac tctgcctgat tttaaccgca
     1621 ctttcgcttg tcggactagc attcagtagt ccacaagcca cacaagattt tgcccagctc
     1681 ttcaatggct caatcaccgc ttaccttgtc ggcattttct ggctaattgc cctcatttgc
     1741 aatttttctg ccaaaaacca ccgcttgcaa tggctcggcg tgcttgccct catcgctttc
     1801 ggctggctac tccgctgggt actggtgatc caagtccaaa ccattgccaa aaccaatgcc
     1861 ttgcaaaatc catatcattt cgattggaca gccgtcgatg gtggtttggg gattgtctcg
     1921 atttttgggc taacggtgct agtaagtatc gtggtatggc aactgatttt aataatttgt
     1981 gggggaagaa aaggtgaaca ataaacgcag aaatctgttg aaaggcgggc tggcacttgg
     2041 tggggcggcg gcgtttgggg ccgggtattc gccgaaggtg tcggagattg ccaaaggggt
     2101 gatgcacggc acatcgggcg agaaaacccg tgatgcaatt cacggtaatt cgctcacgcc
     2161 ggagtatcag gtaaaagacg gcaaactgct cagcaatcct gagcaaattg tgtgcaatac
     2221 acagtgtatg ggctgttgga cgcagtgtgg cattcgggcg agggtggatt tgaacaccaa
     2281 ccaagtgatt cgcatttcgg gcaatccgta tcacccgctt tcctccgaca aaaccctgcc
     2341 gttcggtatg ccgattgcca aggcggaact gttgctggcg ggcgaaagtg gcattgaaaa
     2401 tcgctccacc gcctgtgcta gaggggcggc gttcttggag ggggtgaaca gcccgtatcg
     2461 gattacccaa ccgttgaaac gggtcggaaa acggggcgaa ggcaagtggc agaccatcag
     2521 ctttgagcag ttggtggagg aaatcatcaa tggtggcaac ctatttggtg aaggcgaagt
     2581 ggagggcttg aagacgatcc gcaatctggt cgatccgatt aacccgaaac agcctgattt
     2641 gggaatgaaa gcaaaccagc ttttagttac ttttgccggc cccgaaggtc gtcagccgat
     2701 tttgcaacgc tttgcccaaa agagcttcgg cacgatcaac ttttccaacc acggggctta
     2761 ttgtggcgct gcgtaccgtg ccggttcggg tgcctttatg aaagattttg acaaccaaca
     2821 acacgccaag ccggactggg atcacgctga atttattctg tttatcggca cgtctccggc
     2881 acagtcgggc aatccgttta agcgtcaggc tcgccagctt gccaaacgcc gccctgatga
     2941 caatttcagc tatgtggtgg tttcccctcg tttggagatg acctcctccc tcgccaccca
     3001 aaacaaccat tgggtgccga ttaagcccga gggcgatttg gcgttggtaa tgggaatgtt
     3061 gcgttggatt atcgaaaacg agcgtttcaa tgctgactac ctctcccgcc caagtctggc
     3121 agcgatggaa aatgccggcc acgtcagcta tgccaatgcg tcacatctga ttatttgcga
     3181 accgaaccac ccgaaattcg ggcaggcgtt gcggattagc gatctgcaag atgtgcaact
     3241 cgaccccgaa gagaaagtgg aagaaaacct gattgtggta aaagatcagg caagcggcga
     3301 actcatttca gcaaaagatt gcttacaagc ggtcattttt gtcgaacaaa ttgcaaaact
     3361 gcttgatggc tcggaagtgt tggtgaaatc ctcaatgcag ttgctgaaag aggcgacaca
     3421 agagaaaacc cttgccgaat atagcgacat ttgtggcgtg ccggtgcaaa ccattgaaaa
     3481 cttagcgaaa aaattcactt cgcacggtca taaagccaat gccatcactc acggcggcac
     3541 gatgcacagc accggttttt ataccagttg ggcgattttg ttgctgaatg caatggtcgg
     3601 taacctcaac aaaaaaggcg gaatggcagt agccgcaggc aaattcaaag atttcgggga
     3661 cgggcctcgc tacaatttag cgaacttccc gaatgaagtg aagccaaaag gcacgaacct
     3721 tgcccgcagt aaaaaggcgt accaaaattc aagcgaattt aagcagaaag tgacgaaggg
     3781 cgaaaatccg tatccggcac aaggggcgtg gtatccgttc accggcgggc aaactaccga
     3841 gatgtttacc tcaatggtgc agggctatcc atactttgcg aaagcgtgga tcaaccatat
     3901 ggcgaacccc gtttacggct taaccgctat gaacccgatt gcgttggaga aattaaaaga
     3961 tccgaaaatt ctaccgctct ttgtctctat tgatgctttt atgaacgaaa ccactgcact
     4021 gacggactac atcgtgccgg acacccacaa ctttgagagc tggggctttt caacggcgtg
     4081 gggcggtgtg cctcaacgca ccagcaccgc acgccacccg attgtgccgt ccaaaaacgc
     4141 caaaactgcc gaaggcgaca ccatctgtat ggagaatttc gtgattgcgg tggcgaaaaa
     4201 aatgggcttg ccgggctttg gcgaaaatgc gattgccgat ttagaaggca accgctatcc
     4261 gctccaccgt accgaagatt acttcctacg ggcggcagcg aacattgcct ttgccggtga
     4321 gaaacctgca ccggacgcca gcgagcaaga tctgctgctc accggcgtgc aacggattat
     4381 gccgaaaatt gaacaaacgc taaaagccga agagcgatta aaagtggcga atgtgtattg
     4441 caaaggcgga cgttttgccc cacacgaaag tgcgtggaaa gaggagaata tggagttcca
     4501 gtggaaaaac tgcctgcaaa tttggaacga aaacgtgtat aaagcccagc accacagcaa
     4561 cggtgaacac tattggggct gccctcgtta tatgtcgcca cgttttgcgg acggctccac
     4621 gctggagcag cactatccgc agtcggaatg gggctttaaa ctgatttcgt ttaaatcgaa
     4681 cattatgagc agtattaccg ccccactgtt gcgtctgctc tcgatcaagc ctgagggctt
     4741 agtggcgatg aaccgtttag atgcggaaga aaaaggcatt aaacacggcg atgtggtgaa
     4801 actcagcacc ccaaccgccg gcttgacggt gcagattgtg gtgttggacg gtatcgcccg
     4861 aggcacaatc ggcatcgaac acggctacgg tcataaacag attggggcaa gttcctacac
     4921 cattgacggc gtggaaattc cagccaaccc gatgatcgcc aaagggatta acctcaacga
     4981 cctcggcatt atcgaccaca ccaaagcggt caaatccccg tgggtagatt gggtctgtgg
     5041 ctcagcggtg agaaatggca ttccggcgaa ggtagagaaa ttagcctagc cgaacaagcg
     5101 gttggttttg cagaaaaatg tgcaaaatcg accgctttta ttgatgtaag ggacactgtt
     5161 ccttatgcaa accagcattg cagagcgtaa aaaatcatac tctgcatttt aatttatttt
     5221 ggagaaccta tgacttttgt caaaaaaaca gcactgagcc tgattgcaac ggcacttttc
     5281 gctacatcaa gttttgccgc tgagcagagc caataccaac atattcgtaa tgcaacggcg
     5341 aaaattgaat atgccggcaa gacgtttttg gttgatccgt atttagcgga gaaagatcgc
     5401 tacttaccgc cgaatgcgaa aaaacgtaat ccgaccttgg atatgactgt gagcattgat
     5461 gaagtgttaa atggcgtgga tgcggtgatc gtaactcaca ctcaccacgc tcactgggac
     5521 gatgtagcac aacaacgtgt gccgaaaaat ctgccgattt ttgtgcagaa tgccggtgat
     5581 gcccgtttaa tccgttcaca aggctttacc gatgtgcgtg tggtcggcaa agataccccg
     5641 tttgaaggcg taaccttaac ccgaactcgt ggccagcacg gcaccgatgc gatgtatgcg
     5701 aacccgaaaa ttgccgaaat ggtcggcgat gcgatggacg tagtgatgaa agcggaaggc
     5761 aaaccgaccg tctatttggt gggagatacc atttggaacc acgaaatcga acattcgttc
     5821 aacacttaca aaccagactt tgtggtgctg aatgccggct gtgccaaact accaaacttt
     5881 gaaggcagcc cgattatgtg taccgaagat gtttccaaag cacacaaaat cgctccacaa
     5941 gcgaaaatct taactgtgca tatggacgcc ctgccacaaa cctcaatcag cagtgatcag
     6001 atgcgtgatt atgtacaaaa agagggatta aatcgtgtaa ctgtgccgaa aaacggtgat
     6061 gtgattaagt tctagtagct aaactaacat taccaaaatg gtttaagtag caataaatag
     6121 cgaagcgggt taagccatca agccttaacc cacttttacc aaccatagta tatagtttta
     6181 gatataatta tcttctgtat ttacctgcca ttgcttggta aaccgcattc tcgttggtca
     6241 aaatcgcata ttttgcattt aaaatcgcca actgagaatt aagctcggta ttcagtgcgg
     6301 taatccactc acggaactcc gacacccctt gttcataacg gtttttatag tatgaactga
     6361 tacgtttatt tttcgcattg gtatcttgaa ggatttttaa cgagcttctc gactgcgtat
     6421 aactgtaata ataacggtca atttcattta aggctgaggt aattttttgc tcatagttta
     6481 aacgggcagt cacataatcc gtttcagaaa tttttacgtt atttttaacc cgattccaat
     6541 ctaagaacgg taaatccaat ttaattaagc cgttacccac agggttatct gccacattgc
     6601 cgatattggt tgcactaccg gtaatagaac caccgatggt taaggttggg aaccagcttt
     6661 tctcggttgc ggttaaggtt ttaaatgcac tttgtaagcg ttgtaacgag cctactacat
     6721 cagggcgatt agcaatggct gacactggca catttaaatc taccccttgc aatttcacgc
     6781 tcataatatt cgggtaacga atgttaagcg gagtatttgg ctgaacattt aacaaattgc
     6841 gtaatgtttg ctcggcaatt ttttggttgg ttttcagatc aattacacta tttctggcgt
     6901 ttaagaccgc ttgttgagcc tgatcaaccg ctaaactatc aatcgcaccg gcattcattt
     6961 tgttagttaa aatacggctg atttgctcat aatggcgaat gctctcttcg gtaatacgaa
     7021 tcgcatcacg atagtaagct aactggtagt aagtagtcac aaccgcatta ataatagata
     7081 aacgggtagc ttttaagtct tcaatggtgg ctttatgcgt ccattctgcc gcactggcgg
     7141 tatcggctaa acgtcgccat aaatccacag tataacttaa attaaatgca gcttgagctg
     7201 cggttgttga aacaccggtc gaaacattat ttgaagaagc cgaacctaaa cctttagccg
     7261 cagaaacaga acctgaacca ctaaaggttg gcactaaatt tgcccctact aaattagcgt
     7321 tatacaaggc tttattgact gcaattccgc ttttggctaa atcaaggtta tttttgatgg
     7381 ctaaatcaac cacacggttt aattccgcat ccgtatagcc ttgccaccat tgctcgttaa
     7441 tttgatattg tttggtaatt tcatcatagc tttgataggt ttgctgtgct tgttgcaaag
     7501 tcccgtcatt gctcatattc cctgtggtac aagccgttac ggttagagcc aacgccacag
     7561 aaaatgctaa ttttgaaagt ttcattacat ttccttttga aaataaagag gggaaaatgg
     7621 gcgtattcta cccaaaaaca gattgccttt ccagttaaat gaacaactgt tcatttaatt
     7681 atttaacaaa tcagtaatca aatgctgatg acgaatttgt tgcgaaccta agctcaaacg
     7741 ctcggcaatt aaaatcgctt ttagctctgc caatgcctgt tggaaatcat cattaataat
     7801 cacataatcg aactcattgt aatggttcat ttccgacacc gcctctgcca tacgtttggc
     7861 aatggtttca gcggaatctt gcccacgccc gattaaacgt ttttccaatt ctgtttttga
     7921 cggtggcaaa ataaaaacgg ttttcacatt cggcactttt tcccgaattt gtctagcccc
     7981 ttgccagtca atatccaaaa agacatcaat gccctgctct aggctacgtt caatcatcgg
     8041 caatgatgtg ccgtaataat tgccaaacac ctccgcccat tctaaaaaat acccttgctc
     8101 aatcagctgc ttaaactcat cgtgcgaagt gaaataataa tgcacgccgt cctgttctgc
     8161 cggacgaggc tgacgggtag tgtgtgaaat cgaaagctgt acttccgaac ggggtaaatc
     8221 cgccaacaag gcgttaatta aggaagattt tcctgctcca cttggggcag aaataatata
     8281 aagattgcct aaactcatta tttgtatata cctatttgat tttgggaata gggcgaatga
     8341 tgattcgccc ctacatttca taggaataaa taaaaaataa tggacaactt tcattgtcca
     8401 ttacacaaaa ttatctacgt gccaaaggct gaacgaaggt aatgcctaaa tcccaaggct
     8461 gctcaatcca cgtttcttgt ggaatatcaa tcacataatc atcaaccaac ggtgcaccgt
     8521 gcggtttcgc aaacacggtt acaaaacgag ctttcgggta cattctgcga atttcttttg
     8581 ccgtgttgcc ggtatccact aaatcatcta ccacaataaa gccttcgcca tcggtatcgg
     8641 ctgcgtgtaa cacatttaac tcaccttggc tatcgtgatc gtagctggca atgcacactg
     8701 tttctacgtg gcgaataccc aactcacgtg ctaaaacggc tgccggaaac aagccgccac
     8761 ggctcaccgc aataatccct ttccactgtg tggcaggtaa taaattttct gccaacttgc
     8821 gagcgtgcat atggaacata tcccacgtca cgacatattt ttcatttgtg tatttttcac
     8881 tcatagaaac aacctaatat aaaattgggg gctaccccga tataaaaaat tgcactagga
     8941 taacccgaaa atgctttttt cgccatcatt tcatttattt ttttgtgccg gcagctacgc
     9001 aatcgtatgc ttagcacaaa aaaccaacac taaaatagct tttctaaagt gaaaaagact
     9061 tccttgtttt ggcgagagta aaaatcagca atattgctgt caattttttg ataacggaaa
     9121 ttcagcttcg gcacaatgcc ctgccaatgc caagtgcggt tccaaaccgc taaattggct
     9181 tgatattccg tgtctaaccg cttatagcca aacaaatagt gcttgtcggc aaaatatcgc
     9241 ttgccaaagc cgatacttgc ctgcgttgcc cagcgttcgc cttgaaaaac cgcccccact
     9301 cgagccagcc acttattcga gctttgtgct ttttcccgtg caatttcacg cacgccgtct
     9361 aaatttgcaa aaaaccgccc atttttgacc gcttgccact gcacaccgcc actgagttgg
     9421 tgctgatagc tgttataacg gcttgcggtt agctcctcaa aataccgttt ttgcaaatgg
     9481 gtaaaactcc ccgacaccaa ccattgcgaa ttaaggtaac gcaaaccgtt gagtgttgcc
     9541 ccaaattgaa cattataacg gctactcccc agccaatttt gctcaataaa aggcgaaaaa
     9601 gtcagccgat aagcgacggt gcggtagcta taattcggcg aaacggatac ggattgctca
     9661 cggtaatctc ggttatccca atagtaaatc ccgctataat tgagcgttaa accgacaaaa
     9721 tgattgcctt tcacgttgtg caatttactc aaccctaagc cataacgcac gccttttgct
     9781 gattgtggca aactgtctgc atttttgcgg aaaatccgcc catttacatt cacaatcggc
     9841 gaagatgagg cattattcac gttatctgtt tgggtatatt gcagataaaa atcgggctgc
     9901 cacgcctcat tttcagcaat ttggacttga gtattgcggg caattttagc aagttccggc
     9961 ggtaaatggg cttgaatagc cttaaattcc tgctctgccg cacgaaattg ctgatcttct
    10021 gccaaaatca acgccaaatc aaaacgaggg taaaccaaac tcgggggctt agctaacagt
    10081 tggcgatagt gaaaaactgc ggtttgatga tcttttttcg cataggcaag tgcggcttgc
    10141 gcatagtgcc acaacaacgg gtcaaaattt tcagtttgcg gataacggct taaaagcggt
    10201 tcaagcgttg cccaatcttg gctgagaatc gcttggttaa tttgctgttc aacattctga
    10261 ttgactgaat acgcaggctg ataagcggtc ggtttttgtg aattttttac aacattttgc
    10321 tcaaatttaa ccgcttgcgg ctgacgctca aaggaaatcg ggtcagtgtt gtgttcaatc
    10381 accttttctg cccatacaac ggggctgaac agcgaaaata aaaggggata ttttttcata
    10441 aagataaaga aaattggtag gggcggacct atatgttcgc ctctacggga tttatcactc
    10501 tctccccttg tgggagaggg ttattagaag ctgtaaattg aaatctaaac tattgtgtct
    10561 tatggtatct acaagcaata tcaagacaaa tgccgtttaa tttttcgtta aacggcattg
    10621 aacgttagaa aaggttattt ttggatatcg ccacgagtgc cggcaagtcc aaaattactc
    10681 acttccccag taagatttgc ttttgtctga atttcaccgg caatttcctc tgcattttta
    10741 ccgaaaaatt cgactgtata ttttccagaa aggtttaaag gattattgcc atgtactgtt
    10801 gaagaaatct gagtattatt aatcgtcccc tcttctaata cgattaagtt tccaaattct
    10861 ccctcaactc tacctgaacc ggtacgctta gagaaattaa cattataggt tagatcacca
    10921 ccattaaaac ctttagctcc atcgtggtta aatgcttttc ctgaatatgt tgcagtaccc
    10981 tctgttggta atttctctgt tttcaatcct ttaactgtaa ctgttccatc aactttatca
    11041 atataattac cgttttccca gccatttctt tgaactgctt gtgctgttac tacagaatat
    11101 ggctgattat ataaataact ctgtgttctg actgtgactt taccctcaat agtttcttta
    11161 ctattaccaa gttttaagcc gtaatttgta tcatcaatac cttttgcttt aataatagct
    11221 ataggatcta cttctttttc tgctgctaaa cgctc
//
LOCUS       DANLTI010000089        10867 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.089, whole genome shotgun sequence.
ACCESSION   DANLTI010000089 DANLTI010000000
VERSION     DANLTI010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10867
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.089"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            29..424
                     /locus_tag="PXB09_001878"
     CDS             29..424
                     /locus_tag="PXB09_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5233965.1"
                     /translation="MKKLMIFATTAMIVSNLAHAAGEQSDAREAHESTVKTSTVKYSC
                     QNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLYGDP
                     MEFTNHRKASVNIQSPASEILYKGCTPQK"
     gene            complement(634..2793)
                     /locus_tag="PXB09_001879"
     CDS             complement(634..2793)
                     /locus_tag="PXB09_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5233966.1"
                     /translation="MQIKQTVLAIAITPFISQLSLAQETKISSIELDTIEVNEQQENL
                     LKQQAVMSNEDLVRYSTDMGVPQTGRFGPQGFNIRGVEGNQVAVTVDGISQAASNNYA
                     TFSRYSYYNKSRPEIDTELMSDVTIEKGSSTKVGNGALGGSVNYKTKTVSDILMKGRQ
                     FGGMLKYTYNGQNKENIETAGIAADGQYADALVMYSHRQGHETQTTSKGPDIMGSGRG
                     LPNPYKNNQYSYLAKLGLKWNDENRLELKTSKQRSKNAGQELSYSTVTLRDFLDVQEI
                     ETYGVTYLYTPKNSILENIKVAVTKQDTEISGINDQITIARGTKTDNTKRAFNTKNVE
                     GSLGVTFKPVDLGNTEHKLSTELGYGVSDFSFDMQTYTAGITPTDQNMQSPAKTKSFH
                     ILMGDSILLTQNLSAHLNARLSSQKLHSDDNSLSDKTFNNWAGDIGLNYQLSPVWQIG
                     YKLSRGFRTPTASEMFFNREVQGRGASQTFLANTNLKPETSLGNEISLVGNGSLGSLS
                     VAAYHTHYRNLIDLATIGNNIYQSQNVNRAKIKGVDINGTLDLNTAWNAIPQGFELNG
                     GFGYARGKRNDGTDLLTVQPLKALFGIGYRAVNNDWAIHLNGTYTQGKKAKYAQQYAI
                     LANTGYLSYDKSLTTYPYLSNSATVFDLVAHKKFGERAIVKVGVYNLFNKKYWTWDSL
                     RTIGITSPGVANSITGEGLNRYLAPERYVMASVEFKF"
     gene            2900..3766
                     /locus_tag="PXB09_001880"
     CDS             2900..3766
                     /locus_tag="PXB09_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5233967.1"
                     /translation="MEYKMRTLLFSFIALSMCLNTTKAAEKIVSTAGYASEIVAALGK
                     ADKLVGVDTTSVKPQTIMEKKPKIGYRRQLSAEGILSLTPDLIILAPDAGPNAVIEQI
                     KASGIPLLHLGEKPSLAGIREDIQQIAKAIGAESEAKQLTETILADEKKLADIRSQHS
                     TDKEVLVLIDTASQGIFGLGKKSVGDHFLTLLNLNNSFNAEGNKPLANEALAASNADV
                     ILLASRNQAKESATISKLAESSPQYAQLTNTQAGKKGCVFAINILDALGFGPYTAQYA
                     HQILTTIQPCLK"
     gene            3777..4763
                     /locus_tag="PXB09_001881"
     CDS             3777..4763
                     /locus_tag="PXB09_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5233968.1"
                     /translation="MKLHLTLIFTLIISLVICTHLGAMSLPLSAWHCNNAECESAAYI
                     LWQIRLPRLLGALFIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQ
                     PLLPESISYYALPIAAFLGGWLVTFMLYLLSQRNGQLHIAIMLLIGIALAAFSGALTG
                     ILIYVADDNQLRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGE
                     EDAQYIGFDIAKVKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMRLLGGSNHRHLL
                     LNSLVCGAILLMIADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKHI"
     gene            4763..5569
                     /locus_tag="PXB09_001882"
     CDS             4763..5569
                     /locus_tag="PXB09_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5233969.1"
                     /translation="MSNLLTCQNLSIVHQQKKLLEIQEIAFEQGKFTAIIGPNGAGKT
                     TLLKALSGNNAQTNSAVFYQHQRLTDLNGYALAQKRAMLSQQSQIAFPLKVEELVQLG
                     REPYRQSEFAKFNEKITAWAMETMSLTALKERSSIQLSGGEQHRAHIARVLAQLVPEP
                     NADLSGSWLLLDEPTNHLDIHHQYQLFSLLQKLKQQGLTIIAILHDPALAINQADHIL
                     MLKNGEKFAEMSAKAIAESCLLDELYEMKMGCRYCPHSGQYYLCPALAES"
     gene            complement(5590..6228)
                     /gene="purN"
                     /locus_tag="PXB09_001883"
     CDS             complement(5590..6228)
                     /gene="purN"
                     /locus_tag="PXB09_001883"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDL5233970.1"
                     /translation="MKKFVVLISGNGSNLQAMIDAQKSADTSGQICGVICNKADAYGL
                     IRAKQAGIPTFVFSRKDYQSNVEMDLAIAEQIEQLGAELIVLAGYMKILTPEFTQHFA
                     GKILNIHPSLLPKYPGLNTYQRAIEAGESEHGTTIHFVNEEVDAGAVVLQAKVPIYPE
                     DEIEDVMARVVEQEHRYYPLVIEWFCSGRLVSQHGKAYLDGKLLPACGYAED"
     gene            complement(6335..8492)
                     /locus_tag="PXB09_001884"
                     /pseudo
     CDS             complement(6335..8492)
                     /locus_tag="PXB09_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(8546..9382)
                     /locus_tag="PXB09_001885"
     CDS             complement(8546..9382)
                     /locus_tag="PXB09_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDL5233971.1"
                     /translation="MLPRISSFLASLFMAFFLLGCSVSTQSLNEQNVDSIGQIIDLNT
                     NQTISFTELLSRLSSQDYVLVGEEHTQLIHHQIELYLFNQLTKKAKLHLIALEMLNVD
                     QQPAIDRIQFNRPVNLSATDLREAIQWQKWDWKMYQDLVVESLGSNSRVIATNLTDKE
                     VEILLNGAEPLKGSVSTSSEVKQKIAQLLLSMNHGMPYPMENMVAVQQFRDRRMAEKL
                     VKNALSTSLLIAGNHHVRKDLGVPLHIAEYDRTKKVAVLMLKTEREEITSSQADYLWV
                     TQ"
     gene            complement(9540..10802)
                     /locus_tag="PXB09_001886"
     CDS             complement(9540..10802)
                     /locus_tag="PXB09_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000919159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDL5233972.1"
                     /translation="MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQAN
                     AAVYMALLNPGDTILGMSLAHGGHLTHGASVSFSGKIYKAEQYGITDEGLIDYEALRK
                     QAQEVKPKMIVAGFSAYSQVMDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLP
                     HAHVVTTTTHKTLAGPRGGLILSASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCF
                     KEALEPEFKAYQQQVVKNAKAMVEVFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAAD
                     AALGAANITVNKNSVPNDPQKPFVTSGIRVGTPSVTRRGFKEAEVTALAGWMCDVLDS
                     IGKDNHEQVIAETKAKVLDICKRLPVYA"
BASE COUNT         3227 a         2304 c         1999 g         3337 t
ORIGIN      
        1 aagataacgc ttatttaaag gaaaatatat gaaaaaattg atgatattcg caacaactgc
       61 catgattgta agcaatttag cccatgcagc aggtgaacaa agtgatgcaa gagaagccca
      121 cgaaagcacc gtaaaaacct caactgttaa gtatagctgc caaaacggca aaaaattaag
      181 cgtgaaatac ggcttcaata aacaaggcat tccaacctat gctgaggcaa aattaagcgg
      241 taaaaaacgt tttatgccga tcaacctata cacgacagat gcaaccggca ctaactttgg
      301 tgacgaaaac aatttcagcc tttacggtga tccaatggaa tttaccaacc accgtaaagc
      361 atcagtaaat atccaaagcc ccgcaagtga aattttatat aaaggttgca cacctcaaaa
      421 atagataaaa agtaaaatga gtccgctctg ataagtggct ttttaatagc tgtttattgc
      481 agataggaaa gcattttgtt tttatctact atccagaaac aagcggttaa atttgtttaa
      541 ttttttacaa aaaatgggcc aaaattaacc gcttgtttat tactataaag aaataagtac
      601 gtaaaaatta actcttacat ttaatgctta tctctaaaat ttaaactcca ctgatgccat
      661 tacatagcgc tctggagcaa ggtaacgatt taagccttcg ccagttatac tgttggcaac
      721 tccaggacta gttataccaa tagttcttaa actatcccaa gtccaatatt ttttattaaa
      781 gagattataa accccaactt taacaatcgc tctttctcca aactttttgt gtgcaactaa
      841 gtcaaatacg gtggctgaat tacttaagta tgggtaagtg gttaatgatt tatcgtaact
      901 taaataccca gtattggcta aaatagcata ctgttgtgca tattttgctt ttttgccttg
      961 tgtgtatgtg ccgtttaggt gtatcgccca gtcattgttc acagctcgat aacctatgcc
     1021 gaacaatgct tttaacggtt gaaccgtgag taagtcggta ccatcattac gtttgccacg
     1081 agcataacca aatccaccat taagctcaaa gccttgtgga attgcattcc acgctgtgtt
     1141 taagtctaaa gttccgttaa tatcaacacc tttgatttta gctcggttaa cattttgcga
     1201 ttggtaaata ttgttaccaa tagtggcaag atcaatcaga tttctatagt gggtatggta
     1261 agcggctacg ctcaagctac ctaatgaacc attacctacc agtgaaattt cattacctaa
     1321 gcttgtttcc ggttttaagt tagtatttgc taagaaagtt tggcttgctc cacgcccttg
     1381 aacttcacgg ttaaagaaca tttcacttgc ggtaggtgtt ctaaaaccac ggctgagttt
     1441 atagccaatt tgccatacag gagagagctg ataatttaaa ccaatatctc ccgcccaatt
     1501 gttaaaggtt ttatctgaca aactattatc atcagaatgt aatttctgac tgctcaatcg
     1561 agcatttaaa tgagcagata gattttgtgt cagtaaaata gagtctccca tcaaaatatg
     1621 gaaagacttg gtttttgccg gagactgcat attttgatcg gttggcgtaa tacctgctgt
     1681 ataggtttgc atatcaaaac tgaaatcaga tacaccatag cctaattccg ttgacaattt
     1741 atgttcggta ttacctagat caacaggctt gaatgtaaca cctaagctac cttcaacatt
     1801 tttagtatta aaagcccgtt tggtattatc tgtttttgta ccacgggcaa tagtgatttg
     1861 atcgttaata cctgaaattt cagtatcctg tttggttacc gcaactttaa tattttcaag
     1921 aatactgttt tttggagtgt ataaataagt aacgccataa gtttcaattt cctgcacatc
     1981 caaaaaatca cgtaatgtga cggtagaata agaaagctct tgaccggcgt ttttactgcg
     2041 ttgcttagaa gtttttaatt caaggcgatt ttcatcattc cattttagcc ctaattttgc
     2101 caagtagctg tattgattat ttttgtaagg atttggtaaa ccacgaccac ttcccataat
     2161 atccggacct ttagacgttg tttgtgtttc gtgtccttga cggtggctat acataaccaa
     2221 agcatccgca tattgaccat ccgcagcaat acctgccgtc tcaatattct ctttattttg
     2281 accgttatag gtatatttca acatcccacc aaattggcga cctttcatta aaatatcact
     2341 tacggtttta gttttatagt tcacagagcc gcctaatgcc ccattgccta cttttgtgct
     2401 tgagcctttt tcaatggtta catcgctcat taattcagta tcgatttcag ggcgagattt
     2461 attgtagtaa ctatagcgac taaaggtggc atagttattt gatgctgctt gcgatatgcc
     2521 atcaactgtt actgccactt gattaccttc aacaccacgg atattaaacc cttgtgggcc
     2581 aaagcggcct gtttgcggaa cgcccatatc agtactataa cgtactaaat cttcattgct
     2641 catcaccgct tgctgtttaa gtaggttctc ctgctgctca tttacttcaa tagtatctag
     2701 ttcaatgcta ctaatctttg tttcttgagc taaggagagt tgagaaataa agggagtaat
     2761 cgctattgct aatacagttt gctttatttg catattttag atcctctagt tagtttaatc
     2821 cgtttaatgt taacactata tcattttaat tgaaaattga aataataata attattattt
     2881 aagtttagat aaaaatcaaa tggagtataa aatgagaacc ttactttttt ctttcattgc
     2941 cctatcaatg tgtttaaata ccacaaaggc ggcagaaaaa attgtttcaa ctgcgggcta
     3001 tgcttccgaa attgtcgcag cactaggaaa agctgataag ttagtcggtg tggataccac
     3061 ttcagttaaa cctcaaacga taatggagaa aaaacctaaa atcggttatc gtcgccagct
     3121 ttctgctgaa ggtattctct ctttaacccc agatttgatt attttagccc ctgatgccgg
     3181 ccctaacgca gttattgagc aaattaaagc cagcggtatt ccattacttc acttaggaga
     3241 gaaaccgagc ttagcaggga ttcgtgagga tattcagcaa attgccaagg cgattggtgc
     3301 agaatcagag gcaaaacaat taacagaaac cattctggca gatgaaaaaa aattagccga
     3361 cattcgtagc caacattcta ctgacaaaga agtcttagtg ctgattgaca ctgcatcgca
     3421 aggtatcttt gggctaggga aaaagagtgt gggtgatcat ttcttaacct tgttaaatct
     3481 aaacaatagt ttcaatgctg agggcaataa gccactcgcc aatgaggctt tagctgcaag
     3541 caatgccgat gttattttat tagcctcccg taatcaggca aaagaatctg caacgatcag
     3601 taaattagca gaatccagcc cacaatacgc ccaactcaca aatacacaag cgggcaaaaa
     3661 aggctgtgtt tttgcaatca atattttaga tgccttgggc tttgggcctt acactgctca
     3721 atatgcacac caaattctca ccactattca accttgttta aaataacgga tacgctttga
     3781 aactgcattt aaccttaatt ttcactttaa ttatcagctt agtgatttgt acccatttag
     3841 gggcgatgtc attaccccta tccgcttggc actgcaacaa cgctgaatgc gaaagtgcag
     3901 cctatatttt atggcaaatc cgcctgcctc gattactagg ggcattattc atcggggcag
     3961 ccctcgctat tagcggagca acaatgcaag ggctgtttcg caatccgtta gtagatccgg
     4021 ggattattgg tgtctcttca ggtgctgcat tggctgcggc attatatatt gtggtgattc
     4081 agccactact gccggaatca atcagctatt atgctctacc tattgccgcc tttttagggg
     4141 gctggctggt gacttttatg ctctatttac tttctcaacg taacgggcaa ctacatatcg
     4201 ccattatgct attaattggt attgctctag ctgcatttag tggcgcttta accggcatac
     4261 tgatttatgt tgccgatgat aaccaacttc gtagtttaac cttttggagt atgggatctt
     4321 tagcaggtat gaattggcaa atggtggcaa tgatggctgc ggttgtcttc atttgtagcc
     4381 cacttatttg gcgggaacac cgtgcgttaa acgccttaac attaggtgaa gaagatgcac
     4441 aatacattgg ttttgacatt gcaaaagtca aacgtcgtct tgtgttttac gttgccttat
     4501 taaccggcac aagcgttgcc tgtgttgggg ctatcggctt tgtcgggctg gttattccac
     4561 atttaatgcg tttactggga ggcagtaacc accgccattt attactcaat agtttggttt
     4621 gcggtgcaat cttattaatg attgcagata ctcttgccag aaccctagcc gccccggcag
     4681 aaatcccgat tggtattttt accgccttat ttggtgcgcc attccttgca gtaatggtat
     4741 ggaaaagtgg gaaacatatc taatgagcaa tttattaact tgccaaaatt taagcatcgt
     4801 tcatcaacaa aaaaagttgc tggagattca agaaattgcc tttgaacaag gaaaatttac
     4861 cgccatcatc ggtccaaacg gagccggcaa aacaaccttg ctcaaagcct taagcggtaa
     4921 taatgcacaa actaacagtg ccgtatttta tcaacatcaa cgcttaacag acttaaacgg
     4981 atatgctctg gctcaaaaac gggcaatgct cagccaacag agccaaattg cctttccctt
     5041 aaaagtagaa gaattggtac aactcggaag agagccatat cgccaaagtg aatttgcaaa
     5101 atttaatgaa aaaataaccg cttgggctat ggaaacaatg tctttaaccg cattaaaaga
     5161 aagaagtagc atacaacttt ccggtggaga acaacatcga gcgcatattg ctcgagtgct
     5221 ggctcaactc gttcctgaac cgaatgccga tttaagcgga agctggcttt tgcttgatga
     5281 acccaccaac catttggata ttcatcacca atatcagctt ttttccttac tacaaaagct
     5341 gaaacaacaa ggcttaacta tcattgcgat tttgcacgat cctgcattgg caataaatca
     5401 agccgatcat atcttaatgc taaaaaatgg agaaaaattt gctgaaatgt ccgctaaagc
     5461 cattgcagaa agttgtttat tagatgagct gtatgaaatg aaaatgggct gtcgctattg
     5521 ccctcacagc gggcaatatt atctttgccc tgcattagct gaaagttagg gtgcgatgca
     5581 ccctatcgtt taatcttctg catatccaca agcaggcagt agtttaccgt ctaaatacgc
     5641 tttgccgtgc tgagaaacta atctacccga acagaaccac tcaatcacca acggataata
     5701 tcgatgttct tgctcaacca ctcgagccat tacatcttca atctcatctt caggataaat
     5761 cggcacttta gcttgtaata ccaccgcacc agcatccact tcttcattca cgaaatgaat
     5821 agtcgtgccg tgttcacttt ccccagcctc tatcgctctt tgataagtgt ttagccctgg
     5881 gtatttaggt aataaggaag ggtgaatatt gagtattttg ccagcaaaat gttgcgtaaa
     5941 ttcaggcgtt aaaattttca tatagccggc taatacaatt aactcagctc ctaactgctc
     6001 aatttgttcg gcaatcgcaa gatccatttc cacattgctt tggtaatctt tacgagaaaa
     6061 tacaaatgtc gggattcccg cctgtttagc tcgaatcagc ccataggcat ctgccttatt
     6121 gcaaattaca ccgcaaattt gaccgcttgt atccgcagat ttttgcgcat caatcattgc
     6181 ttgtaggtta gaaccattcc ctgaaattaa aaccacaaat tttttcatat tacacaccgg
     6241 ctgaatattc atcgttctgg atattatgcc ttgaatctca acatcagtac aggaaagaaa
     6301 aagggcgtat tggttaaaat aagccacttt caagctagaa acgcacctct gcccctagtg
     6361 tgtaagttcg acctctggca ctatttgtga aacgataggt gtctgtatca tagtcatact
     6421 cttctgcggt ggaagagtta tacgcattta aggcatcaag ataatttcgg ttcatcacat
     6481 tttgtacccc ggcttttaag gttaaatgtt tattcacttt gtaatttgca tataaatcga
     6541 taatcaccgg aatattcggt aactgctcgt gaataatgtt gccatcttcg tctaaatcaa
     6601 taccgacacg tttcgctttg cctgtatatt taaaaatgct agacagtgtt aattttttat
     6661 ccagcaattt agcccctagc tccaaagtcg cataatcttt tggtagctgg gtataagctt
     6721 cagtgccaaa tccataaaga atagtcgcac cttttgaagt gggtgctgtg ctttcagttc
     6781 gggtataact accattgaca aaaaaagcat cggaatcgta agccagctca acttcccaac
     6841 ctcgattttt aaccttttca gggtgattca cataaatttg gaactgtata gcattggtag
     6901 catcacttga atttcgacat actgttggcc cacaaccata caacgagagg ttatacaaat
     6961 agtctttaat gcgtgagtta aaatataccg cttttagccc caagatatca ttattgagta
     7021 atacattatc ttgatgaata ttaaacccaa tctcataggt tttcgcactt tctggtttca
     7081 aaaacgggtt cacactcaag ccatttcgac tggtattaaa catttcttgc acattaggcg
     7141 aacgggaggt ttgtttgtaa ctgacaaaag gttgaaacca atcagcaacc tgaaatgcta
     7201 aagtggcaga aggattcaac ttataatgtt ttttattaac atcaaaccca aaagaaggga
     7261 aacaataatc catatcatcg ctatcgcatt ctggcttata tccttttaac tgatagcgtg
     7321 aatagtgaag acttgaattt aaagtgacaa tgccgtattt ccattcggtg tctaggtaaa
     7381 gggaatcaat attttgctta cctgccggcc caaaagcggc attgctaatc gctccatcat
     7441 tattcttact ttccggtaaa tcacgggaat atttatttcc ctgactcaaa acggctggtg
     7501 ttattcaaat caaacatcca cattttgttt ttggttgagg catcttctaa tgtccatagt
     7561 tttgcatcat cgtggaaatc ttgcttagtt tctgttactg ctgttaggaa tttcagatca
     7621 atccaatcag attgaggctg gtaactggat tctaaggaat aggtcacact atcaatatta
     7681 cgccccacta agctattttt atattgacgt ccggacaatt taaactctga atcttgattt
     7741 ggcttaaagg caatttttcc catataagat tcagggtgat tttttaaccc ttgcatataa
     7801 gcagaatccg ttgccattgt gccattacct cggcgataat tttgactgat actacttttg
     7861 ctaaaagcca ataaactgcc aagagaacca ctttccagca catcaacttt tccggctagt
     7921 gcaagcattc cgttttttcc cagatcatta ttgccataat taaaacggct taatacgccg
     7981 actttatgtt gttctagtag aatatcttcg acatcaatcg ttttaaaatt agcactaccg
     8041 gctaaagcat tcaatccggc tgcaccattg ttgtagcctt tcgcaatatc aactcgggtt
     8101 aaaaaatttt gatcaattaa agtgctgaat tggctcattg gcccgttacc atcagtgtgg
     8161 aacttaccac ctccgtttgc tgatgtacca agctgtgttt gtggcacgcc atcaactaag
     8221 gtatttaccc gaccaagacc actcatatta cgaatattca cactcacgcc cccttgcccc
     8281 gggtcaattt gggtatagcc acctgcgaca gaacggacaa tactatctaa actttgcatt
     8341 gcattcacat tcattgctcg agaactcacc gagccggctt tactgaaatt ctcaaaatta
     8401 gggttttcca cagtgccata aaccgtcaca gtatcaagct ccgcaatatt tttcgccttt
     8461 tcctctgcca atgcagtttg cgatcctccc atacacaaaa ccggaaacaa aatgcgtgtg
     8521 attatattaa atttcataat tctccttatt gagtgaccca aagataatct gcctgtgaag
     8581 aagtaatttc ttctctctct gttttaagca ttagcaccgc tacttttttt gttcggtcat
     8641 attccgcaat atgcaacgga acgccaagat ctttgcgaac gtggtggtta cctgcaatca
     8701 gcaagctagt cgataacgca ttttttacta atttttctgc cattctgcga tcacggaatt
     8761 gttgtactgc caccatattt tccatcgggt aaggcattcc gtgattcatt gacagcaaca
     8821 gttgtgcgat cttttgctta acttcagagg aagtggatac agaacctttt aatggctccg
     8881 ccccatttaa taaaatttca acctctttat ctgttaagtt agtggctata acacgactat
     8941 ttgaacctaa gctctctacc actaaatctt gatacatctt ccaatcccat ttttgccatt
     9001 gaattgcctc tcttaaatcc gtggctgata aattaaccgg tcggttaaac tgaatgcgat
     9061 caatcgcagg ctgctgatcc acatttaaca tctccaacgc aattaaatgt aacttggctt
     9121 tcttcgtaag ttgattaaat aaatacaatt caatttggtg gtgaattaac tgagtatgct
     9181 cctcaccaac taaaacgtaa tcttgagaag atagacggga aagtagttca gtaaatgaaa
     9241 tcgtttgatt ggtattcaga tcaataattt ggccgataga gtccacgttt tgttcattaa
     9301 gggattgcgt tgaaaccgag cagcctaaaa gaaaaaaagc cataaaaagg ctagctaaaa
     9361 aagaggaaat acgaggtaac ataacaaaaa ataaattaat gagaattatt atcattatgt
     9421 tatgtaaaaa aagaaaaatc aatccatttt cagaaaacag ataaagaaaa tgattgataa
     9481 aacaaaaagc ggtaatattt ctaaaaaata ttaccgcttg aaaaagtgta aagttgagat
     9541 tatgcgtaca ctggtaaacg tttacaaatg tctaaaactt tcgctttagt ctctgcaatc
     9601 acctgttcgt gattatcctt accaatgcta tctagcacat cgcacatcca gccggctaat
     9661 gctgtcacct ctgcttcttt aaaaccacgg cgggtcacag aaggcgtacc cacacgaata
     9721 cctgaagtca cgaatggttt ttgagggtcg ttcggcaccg agtttttatt cacggtaatg
     9781 ttcgcagctc ctaatgcagc atctgccgct ttgccggtta aaccttgttt tacaaagcta
     9841 acaaggaata aatggttttc cgtaccgttt gaaaccacat caaaaccacg ttgcttaaat
     9901 acctcaacca ttgcttttgc attttttaca acttgttgct gatatgcctt aaattccggc
     9961 tctaaagctt ctttaaaaca aaccgctttt gccgcaataa cgtgcatcaa tggtccacct
    10021 tgaccagcag ggaatacggc agattgcagt ttcttataca tttcttcatc gccagatgca
    10081 gataaaatca aaccacctcg agggccggct aaggttttat gggttgttgt cgtcacgacg
    10141 tgagcgtgag gaagcggatt tggataaact cccgccgcaa ttaagcctgc aacgtgagcc
    10201 atatccacaa ataaatatgc cccaacttca tcggcaatct cacgcatttt tgcccaatcc
    10261 ataacttgag aataagcaga gaaaccagca acaatcattt tcggtttcac ttcttgggct
    10321 tgtttgcgta atgcttcata atcaattaag ccttcatcag taatgccgta ttgttctgct
    10381 ttataaattt taccagagaa gctaactgaa gcaccgtggg ttaaatgccc gccgtgcgct
    10441 aaactcatac ctaaaatagt gtcacccgga ttaagcaacg ccatatatac ggctgcattc
    10501 gcttgtgagc ctgaatgcgg ttgaacgttg gcataatctg ccccgaacaa tgctttcgca
    10561 cggtcaatcg caagttgttc tacaatatcc acatactcac aacccccata gtaacgttta
    10621 cccggataac cttctgcata tttattggtt aattgtgagc cttgagcctg cattacacgt
    10681 gggcttgcat agttttcaga tgcaattaat tcaatatgtt cttcttgacg gcgatcttca
    10741 tcttgaatgg cttgccataa tactgcatcg taatcagcga tattcatatc acgttttaac
    10801 atttttggac tcctaataag cttaagtaaa cgtttgcgta agttgatttc acgttatttt
    10861 acgcatt
//
LOCUS       DANLTI010000090        10820 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.090, whole genome shotgun sequence.
ACCESSION   DANLTI010000090 DANLTI010000000
VERSION     DANLTI010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10820
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.090"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..168
                     /locus_tag="PXB09_001887"
     CDS             <1..168
                     /locus_tag="PXB09_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233973.1"
                     /translation="THATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTTLRQY
                     QPKGLGGLVRI"
     gene            404..895
                     /locus_tag="PXB09_001888"
     CDS             404..895
                     /locus_tag="PXB09_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5233974.1"
                     /translation="MQTKPILDACCGSRMFHFDKQNPLVLFADNRQIETTMKDRDKIR
                     HLEIKPDVLHDFTNMPYENESFWHIVFDPPHLVQGGENSWLVKKYGKLPCNWREVLKK
                     GFDECMRVLKPNGTLIFKWNETQIPVSEILKVIDCQPIYGHKSGRLNQTHWLAFVKIE
                     QSL"
     gene            922..1179
                     /locus_tag="PXB09_001889"
     CDS             922..1179
                     /locus_tag="PXB09_001889"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233975.1"
                     /translation="MEQIKLSEKAERALILSQLNENSAMIIDLDDVALILNCGYDYVQ
                     SKISKKPGFPEPVQGINGKSVLFKSGDVIRWVNRQARTRKN"
     gene            complement(1176..2165)
                     /locus_tag="PXB09_001890"
     CDS             complement(1176..2165)
                     /locus_tag="PXB09_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5233976.1"
                     /translation="MASIRKRGSKYQVEISKKGVRKSATFRTKAEAQAWAYEEERKIE
                     IISKGGVVDILFAEALERYQNEVSINKRTWRREIGRINNILKEPIANRYVQDIKRDDI
                     EDWIEARLKRGLKGSSVERDLSILSNVFTYCLKRWGYISENPMIGVIHPNKVPPRKQR
                     YSQEDIDKILEVSKYREDIKRSNARLAAAMLFAIETAMRAGEISGLTWDNVNFEKRIA
                     HLPMTKNGSSRDVPLSSKAIEILKRLETIKKDNSVFQLPQGNGLSARFFELKEKAGLS
                     YLNFHDTRREALSRLAKKVDVMTLAKISGHKDVKILLNTYYAPNMEEVAHLLD"
     gene            2638..4041
                     /gene="asnS"
                     /locus_tag="PXB09_001891"
     CDS             2638..4041
                     /gene="asnS"
                     /locus_tag="PXB09_001891"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDL5233977.1"
                     /translation="MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYD
                     GSCFDPIQAIINNDLPNYNAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLG
                     WVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYW
                     VATPVITASDTEGAGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAE
                     TYACALSKVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK
                     AVLAERKDDMEFFVKHVDKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSW
                     GIDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII
                     GGSQREERLEVLDQRMNEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQ
                     NIRDVIPFPRAPRNANF"
     gene            complement(4141..5133)
                     /gene="epmB"
                     /locus_tag="PXB09_001892"
     CDS             complement(4141..5133)
                     /gene="epmB"
                     /locus_tag="PXB09_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDL5233978.1"
                     /translation="MQPIQIKPLWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKL
                     FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPLEEQQSPAPNILHKY
                     HNRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAVWQQGLTYIAEHPELEEVILSGGD
                     PLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVT
                     HINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPY
                     YLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVPKLAREIAKEPNKILKG"
     gene            complement(5187..5756)
                     /locus_tag="PXB09_001893"
     CDS             complement(5187..5756)
                     /locus_tag="PXB09_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5233979.1"
                     /translation="MKKLITLSAILAVSVATVAEAKRGGGSFRSVSPSKAVATKPVAS
                     QKSTTNQQTQQKDATFANTPNSATAQPQVRQGSTMANVAMGAAAGYILGDMMSSNAHA
                     NQPSQPADANAQAVNSAQNVANGAVPAIAEFKSIGGQIDPFLVEKTDGYRRYCISGVQ
                     YLVAAQGVQTSPTVMVNPNGTPLQCNLIP"
     gene            5923..6489
                     /gene="efp"
                     /locus_tag="PXB09_001894"
     CDS             5923..6489
                     /gene="efp"
                     /locus_tag="PXB09_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDL5233980.1"
                     /translation="MASYSTNDFKKGLKFIQDGEPCVIVENEFVKPGKGQAFTRTKIR
                     KLISGKVLEINFKSGTSVEAADVVDSNYNYSYSDGDFWYFMHPETFEQISVDEKALGD
                     NVKWLVDNAECIVTLWNGSAIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGA
                     VVNVPLFVQIGEVIRVDTRSGEYVSRVK"
     gene            complement(6556..7446)
                     /locus_tag="PXB09_001895"
     CDS             complement(6556..7446)
                     /locus_tag="PXB09_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5233981.1"
                     /translation="MKENLNDLRAFLLVAQTSSFTKAAAQMGVSQSALSHSIRGIEER
                     LQIKLFHRTTRSISTTEAGERLYQRLLPLFDEIDQEVNGLSEFRNALKGGLRINGNEH
                     VFRDVLADKFAEFVKRYPEVALELVAEDRFVDIVAERFDAGIRLGADVAKDMIALRIS
                     PDVKMTAAASPNYLAQHGTPKTPFDLTEHHCLKHRLATLGGILAWEFRDPITKKIVKF
                     QPQGNLTANNGFLLQHYAKQGLGILWSPQDSIQTELDNGSLVPILTDWAMQYEGYHLY
                     YPNRRQNSPLLKALIDVLRG"
     gene            7553..8128
                     /locus_tag="PXB09_001896"
     CDS             7553..8128
                     /locus_tag="PXB09_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDL5233982.1"
                     /translation="MKQILILGASGSLANVVIPELLKDNNVQLTLFARRPQSVAKFET
                     ERVKIVQGDVLDFHALTQAMQGVDAVYAGLAGDLKAMAGNVVNAMNEAQVKRLVWISS
                     MGIYGETGEDHGAILEPYRQSAAVIEASELDYTVVRPGWFTNGSEVQYQLTHKGEPFK
                     GHSVSRKSIADFVARILRENSEIRESVGIAA"
     gene            8179..8622
                     /locus_tag="PXB09_001897"
     CDS             8179..8622
                     /locus_tag="PXB09_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5233983.1"
                     /translation="MNLQQIQDRLALKDLVDTFSNLADEKKVAEQMPLFTQDAVVNTY
                     IGGKLVFEMHGVAEIEQVFTTFLTPFHSVYHLNGQHTVPFIDENNATAINYCAVKLVE
                     TKEGKEILHDHSVRYADTYVKQEGKWRIAKRIANFMISESREIRQ"
     gene            8783..10453
                     /gene="glnS"
                     /locus_tag="PXB09_001898"
     CDS             8783..10453
                     /gene="glnS"
                     /locus_tag="PXB09_001898"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDL5233984.1"
                     /translation="MSEEILTAETGTRANFITHIIDEDLASGKHNNVYTRFPPEPNGY
                     LHIGHAKSICLNFGIAQDYNGLCNLRFDDTNPVKEDVEYVDSIKQDVEWLGFKWEGEP
                     RYASDYFDQLYGYAIELINKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRSVEENL
                     ALFEKMKNGEFAEGKACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGDKWCIYPMYD
                     FTHCISDAIERITHSLCTLEFQDNRRLYDWVLDNISIERPLPHQYEFSRLNLEGTLTS
                     KRKLLKLVTDGIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSAL
                     EACIREDLNENAPRAMAVINPVRVVIENFGEKEILKAPNHPNRPELGERDLPFTREIY
                     IDEADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDASGRISTIFCTYDPDTLGK
                     NPADGRKVKGVIHWVSAEDNKPAEFRIYDRLFTVPNPGAEEDINAVLNPESLVVKHGF
                     VESSLAHAKPEQDYQFEREGYYCLDSKDGSADNLVFNLTVSLKESVAF"
BASE COUNT         3212 a         2271 c         2232 g         3105 t
ORIGIN      
        1 acgcacgcta ccgagtatca aaccacgctt ggcgtaatga agcggatact tgaaccgatg
       61 ttagccgact tcgaggtcga tccgtttgaa gaggctcact accacaaagc cctaactacc
      121 ttaaggcaat accagccgaa aggcttaggc ggcttagtcc gaatttaatt tgcaaaaaaa
      181 tcacacaatc cgaccgcttg tgaaacaaca agcggcggat ttccataccc aaattttgag
      241 gacaagccga tgaaatacgc aaaaatcatt ctatttttaa ccgcctttgc agttgctgct
      301 gaccatctag agttacgcaa cgactgcgat ggcaaaattt gtatggctca acgctaatta
      361 acccaaccgc ttgttccgca agcggttatt ttttggagga aaaatgcaaa caaaaccgat
      421 attagatgcg tgttgtggtt cccgtatgtt tcattttgac aagcaaaatc cactcgtcct
      481 gtttgctgat aatcgacaaa tagaaaccac aatgaaagac cgagacaaaa tccgccattt
      541 agaaatcaaa cctgatgttt tacacgattt cacgaatatg ccatacgaaa acgagagttt
      601 ttggcacatt gtttttgatc cgccacattt agttcaaggt ggagaaaata gctggcttgt
      661 aaagaaatac ggcaaattac cttgcaactg gcgagaagtc ttgaagaaag gctttgacga
      721 atgtatgcga gtgctaaaac caaacggcac gcttattttc aagtggaatg aaacacaaat
      781 ccccgtttca gaaattttaa aagttattga ttgtcagccg atttatggac acaaaagcgg
      841 acgcttaaac caaacacatt ggctggcgtt tgtgaaaatt gagcaatccc tctaaatgag
      901 gggtttattt ttggagagaa tatggaacaa attaaacttt cagaaaaagc ggagagagcc
      961 ttaattcttt ctcagctcaa cgaaaattca gcaatgatta ttgatttaga tgatgttgcc
     1021 ctgattttga attgcggata tgactatgtg caatccaaga tcagtaaaaa gcccggtttc
     1081 ccagagccag tgcaaggcat taacgggaaa tcagttcttt tcaaaagtgg cgatgttatc
     1141 cgttgggtca accgtcaagc acgaacacgc aaaaattaat ccagcaaatg agcgacttct
     1201 tccatatttg gggcgtagta agtgttaagc aaaatcttca catctttatg ccctgaaatt
     1261 ttggctaagg tcatcacatc gacttttttt gccaagcgtg aaagagcctc tctcctcgtg
     1321 tcgtgaaaat tcaaataaga aagcccagcc ttttctttta actcaaagaa tctagcactt
     1381 aaaccattcc cttgtggaag ctgaaaaacg gaattatcct ttttgatggt ttccagtctt
     1441 ttcaagatct cgattgcctt tgatgataac ggaacgtctc ttgatgaacc gttttttgtc
     1501 ataggcaaat gagctattct tttctcaaaa ttcacattat cccacgttaa acccgaaatc
     1561 tcaccggcac gcattgccgt ttcaatcgca aataacatag ccgcagccaa tcgagcatta
     1621 gagcgtttaa tatcttctcg gtatttgctg acttctaaga ttttatcaat atcttcctgg
     1681 gaataacgct gttttcttgg tggcactttg tttgggtgaa taacaccgat catcggattt
     1741 tcactaatat agccccagcg ttttaagcag taggtaaata cattgcttaa aatagacaaa
     1801 tccctctcaa cacttgagcc ttttaaccct ctcttcaatc tagcttcgat ccaatcttca
     1861 atatcatctc gcttaatatc ttgtacataa cgattcgcaa taggctcttt caatatgtta
     1921 ttgattcgac ctatctctcg tcgccacgtc ctcttattaa tcgatacttc attttgatac
     1981 cgctctaacg cttccgcaaa taaaatatca actaccccac ctttcgagat gatctctatt
     2041 ttacgctctt cttcgtaagc ccatgcctgt gcctctgctt ttgtgcggaa ggtagctgat
     2101 tttctcaccc ctttcttcga gatttcgact tgatatttac tgccccgctt gcgaatgctc
     2161 gccatatttt tacctgcctt ttgtcgtaaa tttgtcgtaa tttataccat acaataaccg
     2221 acaataacag ataataaccg attttatgaa atcatcttaa ggcaaagaag agaggaaaaa
     2281 cttaagataa cctattgaaa taactataat aaacgataat aaccgacaaa aaacggaaat
     2341 aaaaaaaagc ccctaatcaa aaaagcgaaa aggggcggaa gtcttaccta aggaaatatg
     2401 aaaaaaactt gcataaatct gttacatata ctcagactgc ctaactgaac gaaagttcat
     2461 taaaaaataa aaaatttttt aacaccaagc aaaatcagat ttaactactt gcaatgctta
     2521 tatagactca caaatttgca aataattccg taaaattatt atatttcccc ctattttctt
     2581 gtagaatacg gaacgtttct tatattaaaa ctcacaacaa agaatttgag gtattcaatg
     2641 tctaaatttc caacagtttc ggaaatccta tccggcaaga tagcggtagg tgaagaagcg
     2701 acagtgcgtg gttgggtgcg tacccgccgt gattcaaaag ccggtttatc tttcttgagc
     2761 gtttacgatg gttcttgctt tgacccaatt caagcgatta ttaataacga tctaccaaat
     2821 tataatgccg aagtattaca tttaaccgca ggttgctctg tggtggtgac cggtaaagtt
     2881 gtggaatccc ctgctgaagg tcaagccgtt gaattacaag caagtaaagt ggaagtgctt
     2941 ggttgggtgg aagatcctga tacctaccca atggcagcga aacgccactc tatcgaatat
     3001 ctgcgtgaag tcgctcactt acgccctcgt acgaacttaa tcggtgcagt tgctcgtgtt
     3061 cgtcactgtt tagctcaagc tatccaccgt ttcttccacg agcaaggttt ctattgggta
     3121 gcaacacctg taattaccgc ctcagatact gaaggtgcag gtgaaatgtt ccgtgtttct
     3181 acgctggatt tagaaaatct acctcgtggc gaaaacggca aagtggattt taaccaagat
     3241 ttcttcggta aagaatcgtt cttaaccgta tccggccagt taaatgcgga aacctatgcg
     3301 tgtgccttaa gtaaagttta tactttcggt ccgacattcc gtgcagaaaa ctcaaacaca
     3361 actcgccatc ttgcagaatt ctggatgatg gagccggaag ttgcctttgc cgacttaaac
     3421 gacaatgcaa aattagccga agatatgctg aaatatgtgt ttaaagcggt gcttgcagaa
     3481 cgtaaagatg atatggaatt tttcgttaaa cacgttgata aagaagcgat tagtcgttta
     3541 gaaaacttta tcaattcgcc atttgctcaa gtagattaca ccgatgcgat tgagatctta
     3601 ttgaaatccg gcaaagaatt tgaattcccg gtgtcttggg gaatcgatct ttcctctgaa
     3661 cacgagcgtt tcttagccga agaacacttt aaatcgccgg tggtcgtgaa aaactatcca
     3721 aaagacatta aagccttcta tatgcgttta aatgatgacg gcaaaacggt tgccgcaatg
     3781 gacgttttag ctccgggaat cggtgaaatt atcggtggtt ctcaacgtga agaacgttta
     3841 gaagtgttag atcagcgtat gaatgaaatg ggcttaaacc ctgaagatta ctggtggtat
     3901 cgtgatttgc gtaaatacgg tacagtgcca cactcaggtt tcggtttagg tttcgagcgt
     3961 ttaatcgtgt atgtaaccgg gttacaaaac attcgtgatg taatcccatt cccacgtgct
     4021 ccacgcaatg cgaacttcta atttgcaaaa aagtaagaga atttaaccgc ttgcaacaag
     4081 cggttaaaaa aggcgaaaat tttaccattt tcgccttttg tttcttgatt tctgtttaag
     4141 ctaacctttc aaaattttat ttggctcttt cgctatttct cttgccagct ttggcacaag
     4201 atagcctgaa gtgatacgct gtaattctcg gtaaatctca ccagcctgtt catcttcaat
     4261 atagaaatgg ctcgcccctg ccactttatc aaataaatgc aaatagtaag gcaaaatccc
     4321 atattcaaaa agtttatcac ttaacctttt taaggtttga gcattatcgt ttacaccttt
     4381 taacatcacc gattgattca gcaatacaac gccggctttt ttcagttgag ccattttgtt
     4441 tgcaaaaaca gcatcaattt cattggcgtg attaatatgg gtaaccaaca cgacattcaa
     4501 gcgagatttt gataaccgtt cacataattc tgtcgtaatt cgattgggaa taacgaccgg
     4561 caagcgtgaa tgaatacgca gggttttgat atgcgaaatc tgctctaatt gcgttaatat
     4621 ccaatctaag tcctgatctt ttgccatcag cggatcacca ccggacagaa tcacttcctc
     4681 cagctcggga tgctcagcaa tataagttag tccctgttgc cacacagctt taccgctttt
     4741 cacttcctca taagggaaat gacggcgaaa acagtaacgg cagttaatcg cacaactgtt
     4801 ttttagcata aataacaaac ggttatggta tttatgtaaa atattcggtg ctgggctttg
     4861 ttgctcttcc aatggatcta ccacaaaccc ttctgcctca ataaattccg cctgtaaaga
     4921 cattgcttgc aaaaaaagcg gatcgtttgg gttacccttt tccatttttt cggcgaacat
     4981 tcttggcact cgaagagcaa ataatttacg ggcagctata tcgccctcaa aatcatttgg
     5041 attgagttca agaaattgta ataagtcgat agggttatta aaggcttgag ccagctcggt
     5101 tagccaaagc ggtttgattt gaattggttg cattgaatat tgtagataca aggggcaggt
     5161 ttttgcctgc ccgcaaataa aaataattat ggaattaagt tacattgtaa tggcgtgcca
     5221 tttggattaa ccattacagt tggtgaggtt tgtacacctt gtgcagcgac taggtattgc
     5281 acgcctgaaa tacaataacg gcgataacca tcggtttttt ctactaaaaa cggatcgatt
     5341 tgaccgccaa tactcttaaa ttctgcaata gcaggaactg ctccatttgc aacattttgt
     5401 gcagaattga ccgcttgtgc atttgcatcc gcaggctggc taggctgatt tgcatgtgca
     5461 tttgatgaca tcatatcacc taaaatataa ccggctgctg cccccatcgc tacatttgcc
     5521 atcgtgctgc cttgacgcac ttgtggctgg gcagttgcac tgtttggcgt attggcaaaa
     5581 gtagcatctt tttgttgcgt ttgctgattt gtggttgatt tttgagaagc taccggctta
     5641 gttgctaccg cttttgacgg gctaactgaa cggaagctcc caccgccacg ttttgcctct
     5701 gccacggttg caacagaaac ggctaaaatc gcagaaagag taatcagttt tttcattcgc
     5761 attccttatc aataaagttt gaaaaattat agcaaaaatc gcaagagatc tttcgctaat
     5821 tttgtgaatt taggttatta tatggctctt tttgacaaac ccaatagggt tgggttcaaa
     5881 atttgttaat ttattgttat tttttaaata attgaggaaa taatggctag ctacagcact
     5941 aacgacttta aaaaaggttt aaaatttatt caagatggcg aaccttgtgt aattgttgaa
     6001 aacgaattcg taaaaccggg taaaggtcaa gcatttaccc gtactaaaat ccgtaaatta
     6061 atctctggca aagtattaga gatcaacttc aaatcaggca cttcggttga agcagcagat
     6121 gtagtagatt ctaactacaa ctactcttac agcgatggtg atttctggta ctttatgcac
     6181 cctgaaacct ttgaacaaat ctcggtagat gaaaaagcgt taggcgacaa cgtaaaatgg
     6241 ttagttgata atgcagaatg tatcgtgact ttatggaacg gttcagcaat tgcagtcaca
     6301 ccaccaaact tcgttgagtt agaaatcgtc gaaaccgacc cgggcttaaa aggcgatact
     6361 gcaggtacag gcggtaaacc ggcaacatta agcaccggtg ctgtggtaaa cgtgccttta
     6421 ttcgttcaaa tcggtgaagt tatccgtgtg gatacccgtt caggcgaata tgtttctcgt
     6481 gtgaaataat ttagcttctc tacaagtggt cgttttttgg tcaatttttt gctaaaaacg
     6541 accgctcatt tttacctatc ctctcagcac atcaattaac gctttcagca aaggcgaatt
     6601 ttggcgacgg ttggggtaat agagatgata gccctcatac tgcattgccc agtcggttaa
     6661 aatcggcacg aggctgccgt tatccagctc ggtttgaatg ctgtcttgcg gactccaaag
     6721 aatgcctaaa ccttgtttgg catagtgttg cagcaagaag ccgttattgg cagtaagatt
     6781 gccctgcggt tgaaatttaa cgattttctt ggtgatggga tcccgaaatt cccacgccag
     6841 aatgccgccc aatgtcgcaa gacgatgttt gagacaatga tgttcggtta aatcaaaggg
     6901 cgttttcggc gtgccgtgct gtgccaaata gttggggctg gcagctgcgg tcattttcac
     6961 atcgggcgaa atgcgtagtg caatcatatc tttcgccaca tctgccccaa gccgaatacc
     7021 ggcatcaaaa cgctcggcga caatatctac aaagcgatct tccgccacta gctccaatgc
     7081 tacttcaggg taacgtttga caaactcagc gaatttatct gccagcacat cacggaaaac
     7141 gtgttcatta ccgttaattc tcagcccgcc ttttaacgca ttgcgaaact cactcagccc
     7201 atttacttct tggtcgattt catcaaacag cggtaacagc cgttgataca gcctctcccc
     7261 tgcctcggtg gttgaaatgc tacgagtggt gcgatgaaac agcttgattt gcaaccgttc
     7321 ttcaatcccc cgaatgctgt gcgacaacgc cgactgcgac acgcccatct gtgctgctgc
     7381 tttggtaaaa ctgctcgttt gtgctaccaa caaaaaagct cttaaatcgt tgaggttttc
     7441 tttcatttaa ccaccttatt aatgaatttt tctcattact tcaagcgatt ttaccctact
     7501 aatcaaatgc aatctacacc gctatactga cttcattcaa tggagaacag caatgaaaca
     7561 gatcttaatt ttaggagcaa gcggtagcct agcgaatgtc gtgattcctg aactgctaaa
     7621 agacaataat gtgcaattaa ccctttttgc ccgtcgtccg caatcagtag cgaaatttga
     7681 aactgaacgc gtcaaaattg tgcaaggcga tgtgttggat ttccacgcat taacccaagc
     7741 aatgcaaggc gttgatgccg tttacgctgg acttgccggc gacttaaaag cgatggcggg
     7801 aaatgtggtg aacgcaatga atgaagctca ggtaaaacgc ttggtttgga ttagctcaat
     7861 ggggatttat ggcgaaaccg gcgaagatca cggggcaatt ttagagcctt accgccaatc
     7921 ggcagccgtg attgaagcca gcgagttgga ttataccgtt gtccgcccgg gctggtttac
     7981 caacggttcg gaagtgcaat atcagctgac tcacaaaggc gaaccgttca aaggacacag
     8041 cgtttcccgc aaatccattg ccgattttgt ggctcgcatt ttgcgtgaaa acagcgaaat
     8101 ccgtgaaagt gttggtattg cagcctaaca agcggtgaaa aaccaaagaa aatttgcaaa
     8161 aatcagaagg aaaacacaat gaacttacaa caaatccaag atcgtttagc actaaaagat
     8221 ttagtagata cattctctaa ccttgccgat gaaaaaaagg ttgccgagca gatgccgctt
     8281 ttcacgcaag atgccgtcgt aaacacctac atcggcggaa aattggtgtt tgaaatgcac
     8341 ggcgtggcag aaatcgaaca ggtgtttacc acctttttaa ccccgtttca cagcgtttat
     8401 catttaaacg gtcagcatac cgtgcctttt attgatgaaa ataacgccac agcgatcaac
     8461 tattgtgcgg tgaaactggt agaaaccaaa gagggcaaag agatcttgca cgatcacagc
     8521 gtgcgttatg ccgataccta tgttaaacaa gagggtaaat ggcggattgc caaacggatt
     8581 gcgaatttta tgatcagcga aagccgtgaa atcaggcaat aacaagcggt taaatttagc
     8641 taaaaatttg caattccatt gcatcttact aaaacagcaa aattctttgg aggaaaccga
     8701 ggaattttgc tttagtcttt aagtctgttt caattaagtg tagaataatc cgttattttt
     8761 attgatacat ttagagagaa ctatgagcga agaaatttta acggcagaaa ctggcactcg
     8821 agccaatttt attacccata ttattgatga agatttagca agcggaaagc acaacaatgt
     8881 ttacactcgt tttccacctg aaccaaacgg ttatttgcat atcggacacg ctaaatctat
     8941 ctgtttaaat tttggtatcg ctcaagatta taacggttta tgtaacttgc gttttgatga
     9001 taccaacccg gttaaagaag acgtggaata tgtagattca attaagcaag atgtggagtg
     9061 gctaggtttt aaatgggagg gtgagcctcg ttatgcctca gactattttg accagcttta
     9121 tggctatgcg attgagttaa tcaacaaagg attagcctat gttgatgaat tatcgcctga
     9181 tgaaatgcgt gaataccgtg gtactttaac cgagccgggc aaaaacagcc cttaccgtga
     9241 tcgtagcgtg gaagaaaact tagcgttatt cgaaaaaatg aaaaacggag agtttgcgga
     9301 agggaaagcc tgcttgagag caaaaattga tatggcgtcc ccgtttattg tgatgcgaga
     9361 tccggtgctt taccgtgtga aatttgctca ccatcatcaa accggtgata aatggtgcat
     9421 ctacccgatg tacgatttta cccactgcat ttccgatgcg attgagcgaa tcactcactc
     9481 gctatgtacg ctagagttcc aagataaccg ccgcttatat gattgggtgc tggacaatat
     9541 ttcgattgaa agaccgttac cgcaccaata cgaattttca cgtttaaatt tagaaggtac
     9601 tttaacctct aagcgtaaat tattaaaatt agtcacagac ggcattgttg atggttggaa
     9661 tgaccctcgt atgccaacca tttccggctt acgccgccgt ggttataccc cagcgtcttt
     9721 acgtgaattt tgtcgccgta ttggggtaac caagcaagat aacgtggtgg aatactctgc
     9781 ccttgaagcg tgcattcgtg aagacttaaa tgaaaacgca ccacgcgcga tggcggtgat
     9841 taacccggtt cgagtggtga ttgaaaactt cggtgaaaag gaaatattaa aagcccctaa
     9901 tcacccaaat cgtccagagc ttggcgagcg tgatttaccg ttcacccgtg agatttatat
     9961 tgatgaagcc gacttccgtg aagaagccaa taagcaatat aaacgtttag tcttaggcaa
    10021 agaagttcgt ttacgcaatg cctatgtgat taaagctgag cgtgtggaaa aagatgcaag
    10081 cggtcgaatt tcaactattt tttgcacata cgacccggat acattgggca aaaatccggc
    10141 tgatggtcgc aaagtaaaag gcgtgattca ttgggtatct gctgaagata acaaaccggc
    10201 agagttccgc atttacgacc gcctatttac agtaccaaac ccgggggcgg aagaagacat
    10261 caatgcggtg ctaaatcctg aatcattagt ggttaagcat ggttttgttg agtcaagttt
    10321 agctcacgcc aaaccggaac aagactacca attcgagcgt gaaggttact actgcttaga
    10381 cagcaaagat ggttcggcag acaaccttgt atttaactta actgtcagct taaaagaaag
    10441 cgtagcgttc taatctaact ctcttcattc aaataccagc aaatatgctg gtattttttt
    10501 actctcaaaa cgactcatca agcataaaaa aagccccaat tcttggggcc actcggaaag
    10561 caaatttatg tgttaggttg ctaggtacaa cacttattct tgttacctta aggttaagcg
    10621 aatttgccgg cagtttcaaa caaaatctct caaaaataca gaccaatgtt taaatttgtg
    10681 atctcagtca caaaatccac tttttccaat tgaaacgttt cattttaaat tatgaggtag
    10741 tgtattattt gagctttcta taatctttgg aaaccaaaag tgatgctctt ttatgatagc
    10801 attgtcttct cgaagaatag
//
LOCUS       DANLTI010000091        10785 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.091, whole genome shotgun sequence.
ACCESSION   DANLTI010000091 DANLTI010000000
VERSION     DANLTI010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10785
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.091"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..261
                     /locus_tag="PXB09_001899"
     CDS             <1..261
                     /locus_tag="PXB09_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233985.1"
                     /translation="ARKAQRRLSFLRVFSLAFAAFIVNTTEFIPIALLSDIASSFQME
                     PSSAGIMMTVYAWVVFLLSLPLMLLTANMERKRLLLMLFMGE"
     gene            258..959
                     /locus_tag="PXB09_001900"
     CDS             258..959
                     /locus_tag="PXB09_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5233986.1"
                     /translation="MIGQALGWRATFGIIGIIALIVLMMIWRLLPYLPSKNAGSIKSL
                     PLLFKRPMLIGIYLLVALIVSGHFTAYSYIEPFMIKISSVSVENTTFILLVFGLAGVV
                     ASFLFGRLYGKAPNKFILSGIAIIMCSQLCLLFLSDSTVAMFMVAFVWGIGITGMSIA
                     LQMKVLELAPDATDVATAIFSGTYNLGIGGGALLGSIAIQQLGLANIGFAGGSIAFVA
                     MVWFVFVSLKYRQLR"
     gene            complement(1026..2759)
                     /locus_tag="PXB09_001901"
     CDS             complement(1026..2759)
                     /locus_tag="PXB09_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDL5233987.1"
                     /translation="MFARLRSLLPTNSRQYREETSQKITWGHWFALFNIVLALLISSR
                     YAFNADWPNTLVGKLYFFVSLFGHFSFVVFAGFLLILFPLSFIVKNHRTYRGLSVILA
                     TIGQTVLLVDTEVFKQFYLHLSPLVWDLLVNPEEGELTRKWQLLFVPMPLLLLAEMLY
                     SRWCWQKLRSFSRQKWGKYVALFFVISFTATHLIYAWADMNAYRPITAQRANYPLSYP
                     MTARNFLEKHGFIDRVEFNQEIEESGRLDTFYLNYPKSPLIATKTPSTNILLINLSGL
                     SKQIINAETMPKLTEISQQSHRFMQHYSSGDSASAGALGLFYSLSGKYLDSVLADKTV
                     SPLIEIARKSDYQLGLFSHNGFADPIYHQAIFSGILLPTAHSNVGAIGQWKNWISSRS
                     LENPFFSYLDLRMPFAHTAQEQAKLLDWQFAEIWQHLTQNALLANTLVIITADISNEV
                     GAENSFDKQHIQVPMMFYWQGESKEYHFLSSHLDIMPTLLSQFFGVQNPLNDYAQGMD
                     LSTQNQRLWVSSSNHKWNVAIMPNGDQYQIDRKGNFKHFNSNGEHEKDARPPLALFLQ
                     MIQQSNQFIEK"
     gene            complement(2764..2985)
                     /locus_tag="PXB09_001902"
     CDS             complement(2764..2985)
                     /locus_tag="PXB09_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1414 domain-containing protein"
                     /protein_id="HDL5233988.1"
                     /translation="MATKSKYHTKQFEQLLADLIATIEKHKAPVDLSLMALGNMITNI
                     LIENIQSPAQREALADAFADALKQSLKTK"
     gene            3224..3796
                     /locus_tag="PXB09_001903"
     CDS             3224..3796
                     /locus_tag="PXB09_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDL5233989.1"
                     /translation="MSRRSEPKEEMVNRILSATESLIVQEGLQNLSMRSIAKEAGIAS
                     GTLYLYFKTKDDLLHSLAAQLLECYNGYMHFEFKPEMALFEQYKALVNKKWQFLIERL
                     DLVKQFQAVIGIDELIRETIADETSFWNKLILEGKKQRIIADLSNELLYGLSIGTLVD
                     IQYLQNLNQENQFDGYLDEIILRTWKAITF"
     gene            3827..5032
                     /locus_tag="PXB09_001904"
     CDS             3827..5032
                     /locus_tag="PXB09_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5233990.1"
                     /translation="MTTETQKLGKGRKFLIVLTLLIVLIVFAAIVGLQKIGAMKKAEA
                     AANMPEAVSEVTAMQVTTQEWTPTISAVGYIRPNQGAMLSAETSGVVSRVLVTSGQRV
                     KKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSASKAEFDNAQSTYNQ
                     LLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVEDQSSMKVRFTLP
                     QTNLEQISIGQKVTAVIDALPAQTFPAKIVAIDPAVDRLTGLINVEAVIEEGQEKLLS
                     GMFARLNVALPTETGQIVVPQISIAYTMYGETVYVLQPLSDEDKEMVNKMAVQNPSLD
                     VNKMYRAKQMEVKTADRKGNYSQLSKGVKAGDLIVTGGLQRLSNNALVKVSDTEAVGI
                     TTPAKNSKL"
     gene            5046..8213
                     /locus_tag="PXB09_001905"
     CDS             5046..8213
                     /locus_tag="PXB09_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDL5233991.1"
                     /translation="MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSI
                     VTVSVNYSGADARLMQTLVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPN
                     AALSDISAKVNAVRSNLPSGIDDPSIRVSTGSNDALMYIRFVSDELNTSQVTDYINRV
                     VKPQFFTVNGVSSVDVYGSVFGLRIWLDPDKMASNNLSGAAVLSALSANNLQTAAGNS
                     NGYYTVYRNKVLSTTPSVTELEEVTVSTTKDGKTIKLKDIATVELDKYQDAARATVGG
                     KDAVVLAVSVAATANSLTVAKDIYPMFEQVLKNLPSTIQGDIVYDKTIAIDSSIKEVI
                     KTIGEATVIVLVVIILFLGSLRAMIVPVITIPISLIGVLFFLQMFGFSINLLTLLALV
                     LAIGLVVDDAIVVLENVERHVKEGKTPFDAAIIGTREIALPVISMTITLGAVYSPMAL
                     MTGVTGTLFKEFALTLAGAVFISGIAALTLSPMMSSRILKEHKEGEESAFARVVHRSL
                     DKMTSCYTNMLSGIMAVRGFVLFFAVLIFASLPMLFGSLSSEVAPTEDRGFVVGISNG
                     PSNTNLDYTEAALAQFNQEVTKLPEVSSLMTVSGFNGANSALSIIALKDWNDRSRERA
                     AISNDVAAIGKKVVGMDVNAIAFPEISTGENDLPFSLVITTADSYEKLAIVASEFLKK
                     AQTSGQFFFANLDLKFDTVTMNMKFDREKMGAYGVTMQQVSGTLGAFLSGAIITRVDI
                     DSRAYPIVSQAVRNDRLNPEDLMNYYVTTATGQSIPLGSFVTMELKTSPSSLPRMSQL
                     NSATIGGVVSGSIGDAVNWAKAELDRTLPSGYQYDFRGESRQFVQEGNAMAMTFALAV
                     IIIYLVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPTAMKGLFMGIAAGTGSKDMM
                     AFANGIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLLHGKSRYEAIFHAA
                     TIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTLFTLFILPVIY
                     TFLGQEHKPLREFDEEKYFPTTKEA"
     gene            8441..9904
                     /gene="guaB"
                     /locus_tag="PXB09_001906"
     CDS             8441..9904
                     /gene="guaB"
                     /locus_tag="PXB09_001906"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDL5233992.1"
                     /translation="MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIVSEPVTISP
                     DMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTRFVTDLSKTVREFMTPKDRLV
                     TVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKAESKPNACKDEFGRL
                     RVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGHSEGVLQRVRETRAKYPDLPIVAG
                     NIATAEGAIALADAGASAVKVGIGPGSICTTRIVTGVGVPQITAIAEAAAALKERGIP
                     VIADGGIRYSGDISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRIAYKGYLKEIIHQQMGGLRSCMGLTGCATI
                     EELRTKAEFVRISGAGIKESHVHDVTITKEAPNYRMG"
     gene            10025..10696
                     /locus_tag="PXB09_001907"
     CDS             10025..10696
                     /locus_tag="PXB09_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDL5233993.1"
                     /translation="MLQAIIFDMDGVIVDTEYLEFSLQKQFIEDIKEHSRPITLEQQS
                     EVVGKCLKEIPVIIKKLSESSLPIEEIRARYYAFFQDLFSKVDFKTIFRADIQQIIQF
                     AKQNQIKLAVASSSALSHIENILTVCGIKDEFDLIVSGEQFEHSKPDPTIYRYTCEKL
                     GVEPQNAVAIEDSYYGMLAAKTAGLTVIGYEEKRILIDQSLADYMGKDMKEILKILQK
                     CNTPS"
BASE COUNT         3140 a         2009 c         2448 g         3188 t
ORIGIN      
        1 gctcgaaaag ctcaacggag attatcgttc cttagagtat ttagtcttgc ctttgcggct
       61 tttatagtaa acaccaccga atttattcct attgcattgc tttcagacat tgcaagcagt
      121 ttccaaatgg agccttcatc ggcaggcatt atgatgacgg tttatgcgtg ggtggtattt
      181 ttattatcgt taccgttgat gttactcacg gcgaatatgg aaagaaaacg gctgttgctg
      241 atgttattta tgggcgaatg atcgggcaag ccttaggctg gcgggcaacc tttggcatta
      301 ttgggattat cgctttgatt gtgctaatga tgatttggcg gttgctgcct tatttaccaa
      361 gcaaaaatgc aggctcgata aaaagtttgc ctttgttatt taaacgcccg atgttaatcg
      421 gcatttattt gctggtggca ttgatcgttt caggacattt taccgcttac agctatattg
      481 agccgtttat gattaaaatc agttcggtga gtgtggaaaa caccaccttt attttgctgg
      541 tttttggctt ggcaggtgtg gtggcaagtt ttttatttgg tcggttatat ggcaaagccc
      601 cgaataaatt tatcttaagc gggatcgcca ttattatgtg cagccagctt tgtttactgt
      661 ttttgagtga ctcaacagtg gcaatgttta tggtcgcttt tgtctgggga attggcatta
      721 ccggaatgag cattgcgttg caaatgaagg tgcttgaact tgcccctgat gcgactgatg
      781 tcgcaactgc aattttttcc ggcacttata atttaggcat tggcggtgga gcattactgg
      841 ggagcatcgc tattcagcaa ctgggattag ccaatatcgg atttgccggt gggagtattg
      901 cttttgtagc aatggtttgg tttgtatttg ttagcttgaa atatagacag ctcagatagt
      961 gacaagcggt catattttgc tgaaattttg caaattttcc tgcaaaaatg accgcttgtt
     1021 gaacattact tttcaataaa ttgattgctt tgttgaatca tttgtaagaa caacgctaat
     1081 ggtggtcgag catctttctc gtgttcgcca ttgctgttaa agtgcttaaa gttgccttta
     1141 cgatcaattt gatattgatc gccattcggc ataatcgcca cattccattt gtgattagaa
     1201 ctggataccc ataaacgttg gttctgggtg cttaaatcca taccttgtgc ataatcattc
     1261 agcggatttt gcacgccgaa gaattggctc agtaaggttg gcataatatc taaatggctt
     1321 gaaaggaaat ggtactcttt gctttcgcct tgccagtaga acatcatcgg cacttgaatg
     1381 tgttgtttat cgaagctatt ttctgctcca acttcattac taatatcggc ggtaatgatt
     1441 accagcgtat tcgccaatag tgcattttgg gtcaaatgtt gccagatttc agcgaattgc
     1501 caatctaata attttgcctg ctcttgagcg gtgtgggcga agggcattct taagtctaaa
     1561 tagctaaaga acggattttc caatgagcga gagctgatcc agtttttcca ttgcccaatc
     1621 gcccctacat tactgtgcgc cgtaggcaat aaaataccag agaagatcgc ctgatgataa
     1681 atcgggtcgg caaaaccatt atgtgaaaac agccctaatt gatagtccga ttttctagcg
     1741 atttcgataa gcggtgacac ggttttatcg gctaaaacgg aatccaaata tttaccgctt
     1801 aaactgtaaa atagacctaa tgcaccggca gaggctgaat caccactact gtaatgctgc
     1861 ataaagcggt ggctttgttg gctgatttct gtcagcttag gcattgtttc ggcatttatt
     1921 atctgtttag ataaacctga taaattaatc agtaaaatat tagttgaggg cgttttggtc
     1981 gcaatcaagg gagattttgg ataattcaga tagaaagtat ctagtctgcc actttcttca
     2041 atttcttgat taaattctac tcggtcaata aaaccgtgtt tttctaagaa attacgagcc
     2101 gtcatcgggt aagaaagtgg gtagtttgct cgttgagcgg taatcgggcg gtaggcattc
     2161 atatctgccc acgcatagat taaatgagta gcggtaaagc tgatcacgaa aaagagagcg
     2221 acatatttgc cccatttttg gcggctaaaa ctacgcagtt tctgccagca ccagcgagag
     2281 tagagcattt ctgccagcaa aaggagtggc attggtacaa acagcagttg ccatttacgg
     2341 gtcagttccc cttcttccgg attaactaac agatcccata caagcggtga taaatgcaga
     2401 taaaattgct tgaagacttc agtatccacc aataacacgg tttgcccgat ggtggctaaa
     2461 atcacggaaa gcccacgata ggtgcgatga ttcttaacaa taaaactgag cggaaacaga
     2521 attaatagaa atcctgcaaa gaccacaaag ctgaaatgcc cgaacaggct gacaaagaaa
     2581 taaagtttgc ctacaagcgt gttcggccag tctgcattaa atgcgtaacg agaggaaatg
     2641 agtagtgcca acacaatatt aaatagtgca aaccaatgcc cccacgtgat tttctgtgag
     2701 gtttcttctc gatattggcg agaattggtc ggcaataaac tgcgtaggcg tgcaaacatc
     2761 atcttatttg gtttttagtg attgttttaa tgcatcggca aaggcatcag cgagagcttc
     2821 tctttgtgcc gggctttgaa tattttcaat taaaatgtta gttatcatat tgcctaatgc
     2881 cattaacgat aaatccaccg gtgctttatg cttttctatg gtggcgatga ggtcagccaa
     2941 tagctgctca aattgtttgg tgtggtattt agatttcgtt gccatattga aataaagatg
     3001 atcctataat taggtacaaa tagtagcaca aaaataataa taaagtagcg ttaagcgtta
     3061 ttgtttgagt gatttttgca aagttttagc caaaaatgac cgcttgttca ataaatgagg
     3121 aattttgcaa ctattttatt ttaatttgat aggtgttttc tgctttcttt tttcataaaa
     3181 aaagctataa tgaacggctg ttcattatag gtaaggagat aaaatgtcta ggcgaagcga
     3241 gccaaaagaa gagatggtaa accgtatttt atcggcaacc gagtcgctga ttgtgcaaga
     3301 aggtttgcaa aacctttcaa tgcgtagtat tgcaaaagaa gcagggatcg cttccggtac
     3361 attatatctt tactttaaaa ccaaagatga tttattgcac tcattggctg cccaattact
     3421 cgaatgttat aacggttata tgcattttga gtttaagcct gaaatggcgt tatttgagca
     3481 atataaagcg ttggtcaata aaaaatggca gtttttaatc gagcgtttag atttggtaaa
     3541 acagtttcaa gcggtgatag ggattgatga attgattcgg gaaaccatag ctgatgaaac
     3601 ttccttttgg aataaattaa ttttagaagg gaaaaagcaa aggattattg ctgatctatc
     3661 taatgagttg ctttatggat taagcatcgg cacattggtg gatatccaat atctgcaaaa
     3721 tctgaatcaa gaaaatcagt ttgatggata tttagacgag attattttac gcacttggaa
     3781 agcaatcact ttttaagttt ctttttatta gttttatgga gaatgtatga caacggaaac
     3841 acagaagctg ggtaaaggca gaaagttttt aattgtactc acattgttaa tcgtattgat
     3901 tgtgtttgct gcaatcgtag ggttacaaaa aatcggggca atgaaaaaag ccgaagcagc
     3961 ggcaaatatg ccggaggcgg tgagcgaagt tactgctatg caagtgacga cccaagaatg
     4021 gacaccaacc atttctgcgg tcggttatat tcgcccaaat caaggggcaa tgttaagtgc
     4081 tgaaacttca ggcgtggtta gccgtgtttt ggtcacttca ggacagcgtg tgaaaaaagg
     4141 tgatctgtta gtagaatttg acagcagtgt tgaaattgct aacttgagag cctctgaagc
     4201 gcaattaccg aatgccaaag caaatttaga gcgttaccgt aatctgattg cctcaaacag
     4261 tgcttctaaa gccgagtttg ataatgctca atctacctac aaccaattat tagccaatat
     4321 cgaggcattg cgtgctacga ttaaacgccg tcaaatttat gctccgttta gtggtttagc
     4381 gggtatcgtg aatgtgaatg ttgggcaata cattacaatg ggtacggaaa ttgtgcgtgt
     4441 ggaagatcaa tcttcaatga aagtacgttt taccttgccg caaactaatt tagagcaaat
     4501 ctcgattggg caaaaagtga cagccgtaat tgatgcgtta ccggcacaaa ccttcccagc
     4561 taaaattgtg gctattgatc cggctgtgga tcgtttaacc ggcttaatta atgtggaagc
     4621 ggtgattgaa gaagggcagg aaaaattgct ttcaggtatg tttgcccgct taaatgttgc
     4681 tttaccaaca gaaaccggac aaatcgtcgt accacaaatt tctatcgctt acactatgta
     4741 tggtgaaacg gtatatgtgc tgcaaccatt atctgatgaa gataaagaaa tggtgaacaa
     4801 aatggcggta caaaacccaa gtttagatgt aaacaaaatg taccgtgcaa aacagatgga
     4861 agtgaaaacg gctgaccgca aaggaaacta ttcacaatta tccaaaggcg tgaaagcagg
     4921 tgatctgatt gtaacaggcg gtttacaacg tttaagtaat aatgcgttgg ttaaagtttc
     4981 tgatacagaa gccgtaggca ttaccacacc ggcgaaaaac agtaaactgt agtggagtga
     5041 gttaagtgaa atttactgac atctttatta aacgtcctgt tttggcagtt tgtatcagcc
     5101 tattgattac gatcctaggc ttgcaagcaa tcgaaaaatt gcaggtgcgt gaatatccgg
     5161 agatgacggt ctcgattgta accgtgagtg ttaactattc aggtgcagat gcacgtttaa
     5221 tgcagacact ggttacctca cagttagaag aggctgttgc tcaagcggat aatattgact
     5281 atatgacttc atcaagctct ccaagtacca ctacggtaac ggcaaaaatg aagttaaata
     5341 ccgatccgaa tgccgcactt tccgatattt cggcaaaagt gaatgcggta cgctcaaatt
     5401 taccgagcgg tattgatgat ccgtcaatta gagtctcaac cggttcaaat gatgcgttaa
     5461 tgtatatccg atttgtctct gatgaactta atacatcaca agttaccgat tatattaacc
     5521 gtgtagtaaa accacagttc tttacggtaa atggtgtttc tagcgttgat gtgtatggct
     5581 ctgtttttgg cttacgcatc tggcttgatc cggataaaat ggcgagcaat aacctatcag
     5641 gggcggctgt attatcggca ttaagtgcca ataacttgca aaccgctgcg ggtaattcta
     5701 acggttacta tacggtttat agaaacaaag tactttctac cacgccttct gtgacagagt
     5761 tagaagaggt tacggtttca accaccaaag atggaaaaac catcaaatta aaagatattg
     5821 cgactgttga gctggataaa taccaagatg cagcaagagc aacggttggc ggtaaagatg
     5881 cagttgtgct tgctgtttcg gtagccgcaa cggcaaactc tttaaccgta gcgaaagata
     5941 tttatccgat gtttgagcag gtattaaaaa atctaccaag caccattcaa ggagatattg
     6001 tttacgataa aaccattgcg attgatagtt ctatcaaaga agtaattaaa actattggtg
     6061 aggcaaccgt cattgtattg gtagtaatta tcctgttctt aggttcatta cgagcaatga
     6121 ttgtaccggt gattaccatt ccgatttcct taatcggggt attattcttc ctgcaaatgt
     6181 ttggtttctc gatcaacttg cttactttgc tggcgttggt attagcgatc ggcttggtag
     6241 tggacgatgc gattgtcgta cttgaaaacg tagaacgtca cgttaaagaa ggtaaaacgc
     6301 catttgatgc agcgattatc ggtacacgtg aaattgcttt accggttatt tcaatgacta
     6361 ttactctggg tgcagtatat tcaccaatgg cattaatgac cggggtaaca gggacactat
     6421 ttaaagagtt cgctttaacg cttgccggtg cggtatttat ttcggggatt gcggcattaa
     6481 ccctttcgcc gatgatgtct agccgaatat taaaagaaca taaagaaggg gaagagtcag
     6541 catttgcccg cgtggtgcat agatcactag ataaaatgac cagctgctat accaatatgc
     6601 taagcggtat tatggctgtt cgtggtttcg tcttattctt tgcggtgctg atcttcgcca
     6661 gtttaccgat gttatttggc tcactttcca gtgaagttgc accgacagaa gaccgtggct
     6721 ttgtggttgg tatttctaat ggaccttcaa acaccaattt agattatacc gaagcagcgt
     6781 tagcccaatt taatcaggaa gtaactaaat tacctgaagt atcttcctta atgacagttt
     6841 caggctttaa tggtgcaaat agtgcattat cgattattgc attaaaagat tggaatgatc
     6901 gtagccgtga acgtgctgcg atttctaatg atgtggctgc aatcggtaaa aaagtggtgg
     6961 gtatggacgt gaatgcaatt gcattccctg aaatttcaac cggtgaaaat gatctaccat
     7021 tctcattagt gattactacc gctgatagct atgaaaaatt ggcaatcgtt gcctctgaat
     7081 tcttgaaaaa agcccaaact tccggtcagt tcttctttgc gaatttagat ttgaaatttg
     7141 atacggtcac gatgaatatg aaattcgacc gtgaaaaaat gggtgcttat ggcgtgacaa
     7201 tgcagcaggt gagtggcaca ttaggggcat tcttatccgg tgcgattatt actcgtgtcg
     7261 atattgactc tcgtgcttac ccgattgtgt cgcaagcggt gcgtaatgat cgtttaaatc
     7321 ctgaagattt aatgaattac tatgtcacga ctgcaacagg gcaatctatc ccgttaggtt
     7381 catttgtgac gatggaatta aaaacatcac catcttcttt acctcgtatg agccaattaa
     7441 actcggccac cattggtggg gtagtatctg gctcaatcgg cgatgcggta aattgggcga
     7501 aagcagaatt agatcgcact ttaccatcag gttatcaata tgacttccgt ggtgaatctc
     7561 gccagttcgt tcaagaaggt aatgcgatgg caatgacttt cgctctagca gttatcatta
     7621 tctatcttgt acttgcaatt caatttgaat cttggcgtga cccattagta attttggttt
     7681 ctgtgccgtt agctgtgagt ggtgcattgt tggtaatgaa cattccaacc gcaatgaaag
     7741 gcttgtttat ggggattgca gcaggcactg gctcgaaaga tatgatggca ttcgccaacg
     7801 gtatttggac ggcaggttat accttaaata tctattcaca agtaggtcta attacccttg
     7861 tcggcttaat tactaaacac ggtatcttga tgtgtgaagt ggcgaaagaa gagcagttac
     7921 tgcacggcaa atcacgctat gaagctattt tccacgcagc cacgattcgt ttacgcccaa
     7981 ttatgatgac aacggcagca atgattgcag gcttaattcc gcttctgttt gcggtgggtg
     8041 ccggtgcaat cgcccgcttc agtatgggta tggtaatcgt agcaggcttg gcaatcggga
     8101 cattgtttac tctgtttatc ttgccggtta tctacacttt cttagggcaa gaacacaagc
     8161 cattacgtga atttgacgag gaaaaatatt tcccaacgac aaaagaagca tagttttaaa
     8221 tagcaaaaga gcgtagcgat acgctctttt ttgttggctt acaagcggtc gttttttatt
     8281 tattgtttgc taaaaaatca caaaatttaa ccgcttgaaa gtatattttc agatagcgta
     8341 aacgtttccc tatttacaga aacctagttc ctctgtataa tccgctcgca attttccagt
     8401 acagattttc aatttaatca ttttttaagg aataattgca atgctacgaa ttaaacaaga
     8461 agccctcact tttgatgatg ttcttctcgt cccggcacat tctactgtgc ttcctaatac
     8521 tgctgatctt tctactcaat taactaaaac cattcgttta aacattccga tgctttctgc
     8581 tgcaatggat accgttacag aaactaagct tgcgatctcc cttgctcaag aaggcggcat
     8641 tggttttatc cataaaaata tgtcgattga acgccaggca gaccgtgtgc gtaaagtgaa
     8701 aaaatttgaa agtggtattg tttctgagcc agtgacgatt tctcctgata tgacattagc
     8761 ggaattggct gaattggtga aaaagaacgg ttttgcaggc tatccggtga ttgatgaaaa
     8821 ccaaaattta gtgggaatta ttaccggacg tgatacccga tttgtcacgg atttaagcaa
     8881 aacagtgcgt gaatttatga caccaaaaga ccgtttagtg acggtaaaag aaaacgcaag
     8941 ccgtgaagaa attttccact taatgcacga acaccgagtg gagaaagtgc tggtagtgaa
     9001 taatgaattt cagttaaaag gaatgattac cctaaaagac taccaaaaag cggaaagcaa
     9061 accgaatgcc tgtaaagatg agtttgggcg tttgcgtgtg ggggcggcag tgggagccgg
     9121 tccgggcaat gaagaacgaa ttgatgcttt agtaaaagcg ggtgtcgatg tgctattaat
     9181 cgactcttcg cacgggcatt ctgaaggtgt attacaacgt gtgcgtgaaa cccgtgcaaa
     9241 ataccctgat ttaccgattg ttgccggtaa tattgccact gcagaaggag cgattgcgtt
     9301 agctgatgca ggagccagtg ctgtgaaagt aggaatcggc ccgggttcaa tttgtaccac
     9361 cagaattgta acaggcgttg gcgtgccaca aatcacggca atcgcagaag cggcagctgc
     9421 gcttaaagaa cgaggcattc ctgtgattgc tgatggtgga attcgttatt caggcgatat
     9481 ttcaaaagct attgccgccg gtgcaagttg cgtaatggtc ggttcgatgt ttgccggcac
     9541 agaagaagcc ccgggtgaaa ttgagcttta tcaaggcaga gcattcaaat cctaccgtgg
     9601 aatgggatca ttaggtgcaa tgagtaaagg ctcgtcagat cgctatttcc aatctgataa
     9661 tgccgccgac aagctcgtac cggaagggat tgaagggcgt atcgcttaca aaggctactt
     9721 gaaagaaatt atccaccaac aaatgggcgg cttacgctcc tgtatgggat taaccggctg
     9781 tgccactatt gaagaactcc gcaccaaagc agaatttgtc cgcattagtg gtgctggtat
     9841 taaagaaagc cacgtccacg atgtgacaat taccaaagaa gcaccgaact accgaatggg
     9901 ttaatagcct ttctcactct ctccccttgt gggagagaga ccgttttaaa ttacgttcag
     9961 taatttaaaa cagagagagg gaataagtgg ttagattttc ttaaaatttt acaaaagagg
    10021 ctatatgctc caagctatca tttttgatat ggacggcgtg attgtggata ccgaatatct
    10081 ggaattttcc ttacaaaaac agtttattga agacatcaaa gaacacagcc gcccgattac
    10141 tttagaacaa caatcggaag tggtaggcaa atgtttaaaa gaaattccgg tgattatcaa
    10201 aaaactaagc gaatccagtt tgccgattga ggaaattcgt gcacgttact acgccttttt
    10261 ccaagatctg tttagcaaag tggattttaa aaccattttc agagccgata ttcagcaaat
    10321 tattcaattt gccaagcaga atcaaattaa gcttgcggtt gcctcttctt ccgccctttc
    10381 gcatattgaa aatattctca cggtttgcgg cattaaagac gaatttgatt taatcgtcag
    10441 cggtgaacag tttgaacaca gcaagccaga cccaaccatt taccgctaca cctgcgaaaa
    10501 attaggcgtt gagccacaaa atgcagtggc gattgaagac tcctactacg gaatgctcgc
    10561 cgccaaaacc gcaggcttaa cggtgattgg ttacgaagaa aaacgaatac tgattgacca
    10621 aagtttagcg gattatatgg gcaaagatat gaaagagatt ttgaagattc ttcaaaaatg
    10681 taatactcca agttaataaa cggtcgattt ttatagaaat tttgtcaatg tttctacttc
    10741 aagtacttgg aacagtctat cggcttgagt aacctagaaa tgaga
//
LOCUS       DANLTI010000092        10673 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.092, whole genome shotgun sequence.
ACCESSION   DANLTI010000092 DANLTI010000000
VERSION     DANLTI010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10673
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.092"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..858)
                     /gene="pdxY"
                     /locus_tag="PXB09_001908"
     CDS             complement(<1..858)
                     /gene="pdxY"
                     /locus_tag="PXB09_001908"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HDL5233994.1"
                     /translation="MKNILSIQSHVVYGYAGNKASTFPMQLLGVDVWALNTVQFSNHT
                     QYGKWGGMVMPKEQIGSIVDGIHNIGELHRCDAVLSGYIGSAEQVAEIIQAFHKVKAE
                     NPNAIYVCDPVMGHPDKGCIVADGVKEGLINLAMAQADIITPNLVELRELTGLTVENF
                     EQAVEAVKVILTKGPKKVLVKHLSRVGKESNKFEMLFANQDGIWHISRPLYQFAKEPV
                     GVGDLTAGLFVANLLNGKSDLEAFEHTANAVNEVMEQTARSGLYELQIIASRDRIVNP
                     QCSYQAVKIA"
     gene            977..1052
                     /locus_tag="PXB09_001909"
     tRNA            977..1052
                     /locus_tag="PXB09_001909"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1010..1012,aa:Thr,seq:tgt)
     gene            complement(1147..2100)
                     /gene="accA"
                     /locus_tag="PXB09_001910"
     CDS             complement(1147..2100)
                     /gene="accA"
                     /locus_tag="PXB09_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDL5233995.1"
                     /translation="MSQEFLDFELPIAELEAKIESLRAVSEQDDKINLDDEIKRLQKK
                     SEELTKKTFANLDAWQISRMARHPNRPYTLDYIEHIFTEFDELAGDRAFADDKAIVGG
                     IARLDGRPVMVIGHQKGRTVKEKVKRNFGMPAPEGYRKALRLMEMAERFNMPIITFID
                     TPGAYPGIGAEERGQSEAIARNLREMSQLSVPVICTVIGEGGSGGALAIGVGDKVNML
                     QYSTYSVISPEGCASILWKSADKASTAAEVMGLTAPRLKELELIDNIVPEPLGGAHRN
                     VEQIAQNLKQRIVEDLAGLDQLNKEDLLERRYQRLMNYGYV"
     gene            complement(2154..3578)
                     /locus_tag="PXB09_001911"
     CDS             complement(2154..3578)
                     /locus_tag="PXB09_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HDL5233996.1"
                     /translation="MKKQITRRQFLQGSALAAGFATVPTPLLAAERPQLNIPPLMDIG
                     RGKPVRLDLRPAQTQFDKGKLVDVWGVNGQYLAPTVRVKSGDFVKLTYLNNLPQKISM
                     NIQGLQASSEMIGTVHRSLDPKSSWSPIVSINQPACTCWYHADTMLNSAFQVYRGLAG
                     LWMIEDEQSKKATLPNKYGVNDIPLILQDQLLNKDGVQVLDKNTSQFFGKRLFVNGQE
                     SPYFNVPRGWVRLRIVNASLSRAYELRLDNEQPLYLIATGLGMLAEPLETESVQLAPS
                     ERVEVLVDLSEGKAVSLISGQKRDIFYKIGQVFADNDELNDNVILELRPEGMAAVLNN
                     KPSLPAFNLEEFNLKISQERRFAIRPADYLINQKRFDPKRIDFTAQKGSVERWYLHST
                     QAVGFTLQGAKFIIETLNRKQYPIKQLAWRDTVWLEAEQEITLLVRFDNTAPEQLPFT
                     FGVSDFMLRDRGTMGQFSVIENGQ"
     gene            complement(3580..4314)
                     /locus_tag="PXB09_001912"
     CDS             complement(3580..4314)
                     /locus_tag="PXB09_001912"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDL5233997.1"
                     /translation="MLKIFRILIVALAAIFISIFGTIYALLRLRHPSSVGVVARWFGA
                     LHKLVGLELITRKKPEINYPVVYIGNHQNNYDMVTISSMVAEKTVSIGKKSLIWIPFF
                     GLVYWATGNIFIHREKRSSAIETMNKAGQIVKERNVSVWMFPEGTRSRGRGLLPFKTG
                     AFHLAISAGVPIVPVVCSNLHNKVDLNRSNNGTVICEMLDPIDTSGYSRENVKELMEK
                     CHQIMLAKFEQLNQEVEQLENTAKNA"
     gene            4461..4958
                     /gene="tpx"
                     /locus_tag="PXB09_001913"
     CDS             4461..4958
                     /gene="tpx"
                     /locus_tag="PXB09_001913"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDL5233998.1"
                     /translation="MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDG
                     KRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVLCISADLPFAQARFCGAEGIENA
                     KVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
                     ALAVL"
     gene            complement(5043..6668)
                     /gene="yidC"
                     /locus_tag="PXB09_001914"
     CDS             complement(5043..6668)
                     /gene="yidC"
                     /locus_tag="PXB09_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDL5233999.1"
                     /translation="MNNRGLLLMGLFLVSILIFTQWQQDFDPEIQAQKQAQVAAQTQQ
                     AGDLPSASNANNPIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNT
                     PFKLLQQDGDKIYVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEK
                     EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTG
                     GAYSSSETNYKKYSFQDMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTN
                     NGVATIGYRGPLTTIAPNAEANLNSKLWTGSKDQKEMGESANHLDLTVDYGWAWFIAK
                     PLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRER
                     FGDDRQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW
                     IQDLSAQDPYYILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFPSG
                     LVLYWLTSNLITIAQQWLIYRNLEKKGLHSRKK"
     gene            complement(6821..7246)
                     /locus_tag="PXB09_001915"
     CDS             complement(6821..7246)
                     /locus_tag="PXB09_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDL5234000.1"
                     /translation="MTIWKQTATCEQLNTLSQKSAVSHLGIEFTAIGEDWIEAQLQVD
                     ERTQQPFGVLHGGVSAALAETTANAGALMVCEPHQIAVGMELNISHLKSIPAGTKAIA
                     KATPLKLGREVQVWNIDIKDEQGNLCAVARLSTKTLDKR"
     gene            complement(7575..10667)
                     /locus_tag="PXB09_001916"
     CDS             complement(7575..10667)
                     /locus_tag="PXB09_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDL5234001.1"
                     /translation="MIPRLSEVPQLDKATQSYLTELVNQHFSGEIASNYADRLSLATD
                     NSVYQQIPQAILFPKSVSDVVILTKLAQKPEYQHLTFTPRGGGTGTNGQSLNNNIIVD
                     LSRHMNQILELNVEERWVRVQAGVVKDQLNQFLKPHGLFFSPELSTSNRATLGGMINT
                     DASGQGSLQYGKTSDHILAIKSVLINGDILETQAVKSADFFAHIEGLNLSALGKTLHR
                     EIFNRCKTLRPKVLNELPQLNRFITGYDLKNVFNHGESEFNLTRILTGSEGSLAFICE
                     AKLNLLPIPKYRTLINIKYNSFDAALRSAPFMLEAKALSVETVDSKVLNLAKQDIVWH
                     SVSDLLTEDPANPILGINIVEYASSDQTQIETQVKALCQSLDQKMANNEAGIIGYQLT
                     SDVNSIEKIYAMRKKAVGLLGNAKGWAKPIAFVEDTAVPPENLADYIVEFRALLDRYN
                     LPYGMFGHVDAGVLHVRPALDLCDKAQVETFKQISDQVVELTAKYGGLIWGEHGKGMR
                     SYYGERFFGETLWQELRYIKTLFDPYNRLNPGKICTPLESETSLYPIDSQMRADFDRQ
                     IPIQVREEFKGAMNCNGNGLCFNFDVHSTMCPSMKVSGNRLYSPKGRATLVREWLRLL
                     TEQNVSPDDLIFKPRKQAVKLADFVAKIRNTLNKNKEYDFSHEVKAAMDTCLACKACA
                     SQCPIKIDVPTFRSQFNELYHSRYLRPLKDYVVSNLEFIAPLMAKQPRFFNFFSTSTF
                     AEKAANKTIGMTYLPALSVPNLQHQLVEVGYQGESLESLEQQATSGDFSAKNCKTLFI
                     VQDPFTSYYDAKVVADFIALIKKLGFKPIVLPFKPSGKAQHVKGFLHKFAKTAKNQAD
                     FLNRVAKLGLPMVAVDPALTLLYREEYKEILKEARGDFKVLLAHEWLREVIKNGELEN
                     CKKSANSDRLPWYLFAHCTESTALPSSMKEWQAIFTHFGETLLNENVGCCGMAGTFGH
                     ETKHVEMSKAIYQQSWQIKLKNKPLERCLATGYSCRSQVKRFEQQGIKHPIQALLDVI
                     "
BASE COUNT         2839 a         2288 c         2294 g         3252 t
ORIGIN      
        1 ggcaatcttt acagcttggt aactacactg tggattaaca atccgatcac gagaagcaat
       61 aatttgtaac tcataaagcc ctgatctagc ggtttgttcc attacctcat tgaccgcatt
      121 tgcagtgtgt tcaaaggctt ctagatcgga ttttccattt aataagttcg ccacaaatag
      181 ccctgcggtt aaatcgccta caccgacagg ttctttggca aattggtaga gtgggcggct
      241 gatgtgccaa atgccatctt ggttggcgaa cagcatttca aatttgttgc tctctttgcc
      301 gactcggctt aaatgtttaa ccaatacttt tttcgggcct ttggttaaaa tcactttcac
      361 tgcctcgacc gcttgctcaa aattttccac cgttaaaccg gttaattctc ttaattccac
      421 taaatttggt gtgataatgt cggcttgtgc cattgccaga ttgatcaatc cctcttttac
      481 gccgtctgcc acaatgcagc ctttgtcggg gtgtcccatt accgggtcgc atacataaat
      541 tgcgtttgga ttttccgctt tcactttatg aaaagcctga ataatttcgg ctacttgttc
      601 tgccgagccg atatagccag agagtacggc atcgcaacga tgcagttcac cgatattgtg
      661 aatgccatca acaatgctac cgatttgttc ttttggcatc accataccgc cccattttcc
      721 atattgggta tggttggaaa actgtacggt atttaacgcc catacatcaa cacctaacag
      781 ctgcatagga aaagttgaag ccttattgcc ggcatagccg tagacaacgt gcgattgtat
      841 ggatagtatg tttttcattc attcactcct ttaaaatttc aatatgtgtt gttttttagt
      901 catttgaagt tgcaaggact tgaagctcat caagaaatct ctataatccc gcctcgttct
      961 cttatccatt caatatgccg acttagctca gtaggtagag caactgactt gtaatcagta
     1021 ggtcaccagt tcgattccgg tagtcggcac catcaccttt attttctgat gagtcccctt
     1081 taatgtaaaa tggcaagatt ttgcaaattt tcacaaaaat cttaccgctt gtagggtgaa
     1141 attgaattag acgtaaccgt aattcattaa gcgttgataa cggcgttcca gtaaatcctc
     1201 tttattaagt tgatctaacc ctgccaaatc ttcaacaata cgctgtttaa ggttttgggc
     1261 gatttgttca acattgcgat gagcaccgcc taagggttcc ggcacgatgt tatcaatcag
     1321 ctcaagctct tttaaacgag gggcagttaa acccattact tctgctgccg ttgaggcttt
     1381 atcggcactt ttccacagaa tcgaggcaca gccttcaggt gaaattaccg agtaagttga
     1441 atattgcaac atattgacct tatcgcccac accgatcgct aatgcaccgc ccgagccacc
     1501 ttcgccaatt accgtacaga ttactggcac ggaaagttga gacatttcac gcaggttacg
     1561 ggcaatcgct tctgactgac cacgctcttc cgcaccaatg cccggataag ctcccggtgt
     1621 gtcgataaag gtgatgattg gcatattaaa gcgttctgcc atttccatta aacgtaacgc
     1681 tttgcgatag ccttcaggag caggcatacc aaagttacgt ttcactttct cttttacggt
     1741 acgacctttc tgatgaccga taaccatcac cggacgtccg tccagacggg caataccacc
     1801 gacaatcgct ttatcatcgg caaaggcacg gtcgcctgcc agttcgtcaa attcggtgaa
     1861 aatatgctca atataatcta aagtgtacgg gcgattgggg tggcgtgcca tacgggaaat
     1921 ttgccacgca tctaaattag caaaggtttt cttggttaat tcctcgcttt tcttttgtaa
     1981 acgcttgatt tcatcatcaa gattaatttt gtcatcttgc tcgctgactg ctcttaaaga
     2041 ctcgatcttg gcttccaatt cagcaatcgg caattcaaaa tctaaaaatt cttggctcat
     2101 tctattttcc tttttatggg caaaattatg gggcattatc gcttatcagt cggttattgt
     2161 ccattttcaa ttacgctaaa ttgacccatc gtacctctat cacgcagcat aaaatcgctc
     2221 acgccaaagg taaatggcag ttgctcaggg gcagtattat caaagcgaac caacagcgtg
     2281 atttcttgct ccgcctcgag ccaaacggtg tcccgccacg caagttgttt gatagggtat
     2341 tgcttgcggt ttagggtttc aataatgaat tttgcacctt gtagcgtaaa tccgaccgct
     2401 tgtgtgctat gtaaatacca acgctcaacg ctgccttttt gcgcggtaaa atcaatgcgt
     2461 tttgggtcaa accgcttttg gttgattaaa taatcagccg gacgaatggc aaaacgtctc
     2521 tcttggctga ttttcaggtt aaattcctct aagttgaaag ccggtaaact cggtttatta
     2581 ttcaataccg ctgccattcc ttcagggcga agctctaaaa tcacgttatc attcaattcg
     2641 tcgttgtcag caaagacctg cccgattttg taaaaaatat ctcttttttg accgcttatc
     2701 agcgataccg ctttcccttc gcttaaatcg accaacactt ccaccctttc actcggtgca
     2761 agttgaaccg attcggtttc aagtggctct gccagcattc ctaagccggt ggcgattagg
     2821 tacaacggct gctcgttatc taagcgtaat tcataagcac gggaaagtga ggcattgacg
     2881 atccgcaatc tgacccagcc acgaggcacg ttaaaataag gcgattcctg cccgttgaca
     2941 aataatcgct taccgaaaaa ttgtgaggtg tttttatcta acacctgtac gccgtctttg
     3001 ttgagcagct ggtcttgcag aattaacgga atgtcgttca cgccatattt attcggtaaa
     3061 gtggcttttt tgctctgttc atcttcaatc atccacaagc cggctaagcc acgatacact
     3121 tggaatgccg agttgagcat tgtatcggcg tgataccaac aagtacaagc cggttgattg
     3181 atagaaacaa tcggcgacca gctacttttg gggtcaaggg aacgatgcac cgtgccaatc
     3241 atctcacttg aggcttgcaa tccttgaata ttcattgaga ttttttgcgg taaattattg
     3301 agataagtta atttgacaaa atcccccgat tttacccgta cggttggggc aagatattgc
     3361 ccgttcacac cccatacatc aaccaatttg cctttatcaa attgggtttg tgcggggcgt
     3421 aaatccaacc gaaccggctt tcctcgccca atatccatta aaggcggaat gttcagttgc
     3481 ggtcgctctg ctgctaatag cggtgttggc actgttgcaa atccagccgc aagggcagag
     3541 ccttgtaaaa attggcgtcg ggtgatctgt tttttcatat taggcgtttt ttgcagtgtt
     3601 ttctaactgt tcgacttctt gattaagttg ttcaaatttt gccaacataa tttgatggca
     3661 cttttccatc agttctttga cgttttcacg ggaatagcct gaagtatcaa tcggatcaag
     3721 catttcacag attactgtgc cgttatttga acggttcaaa tccactttat tgtgtaaatt
     3781 agagcaaact accggcacaa tcggcacgcc ggcagaaatg gctaaatgga atgcaccggt
     3841 tttaaatggc agtaaaccac gcccacggct acgagtacct tccgggaaca tccacaccga
     3901 cacattgcgt tctttcacga tttgccctgc tttattcatt gtttcaatcg cactggaacg
     3961 cttttcacgg tgaataaaaa tattgccggt tgcccagtaa accaaaccga aaaacggaat
     4021 ccaaatcagg ctttttttgc cgatactcac cgtcttttct gccaccattg aggaaatcgt
     4081 taccatatcg taattgtttt gatgattgcc gatatagaca accggatagt taatttccgg
     4141 ctttttgcgg gtaattaatt ccaacccgac taatttatgc aaagcaccaa accaacgagc
     4201 taccacaccc acgctacttg ggtgacgtaa acgcagtaac gcataaatag tgccaaaaat
     4261 agaaatgaaa atagcggcaa gggcaacaat taaaatacga aaaattttta acataatgga
     4321 ataaccttaa aaataaattg tctaggagta tagcaaaata aggttatttt ctaaaggcta
     4381 tccacattaa attgatagtt tcctattttg caaaaaatcg gtatatttaa accgcttgtt
     4441 tatttgataa ggagaaaaaa atgagtaaag tgactttagc aggaagcccg attgatgttg
     4501 caggcacatt tccacaaaaa ggcgatgtgg ttgccgattt taccttagtc aacagtgatt
     4561 taagtgatgt ttcgctttcc gattttgatg gcaaacgcaa agtgttaaat attttcccaa
     4621 gtattgacac cggcatttgt gccacttctg tgcgtgtgtt taatcaaaaa gcggctgatg
     4681 tagcgaatac ggttgtcctt tgtatttcag cggatttacc ttttgcccaa gcacgtttct
     4741 gtggagcaga aggaattgaa aatgccaaag tattatccag tttccgtcat cgtgatttac
     4801 acaacaaact gggggtagat attatttcag gtccgttggc aggcttaact tcacgttcag
     4861 taattgtgtt agatgaaaac aacaaggtat tacacagcga attagtgccg gaaattaaac
     4921 aagagccgga ttatgaggcg gcgttagcgg tattataatt tgcagaatta tgctggaaaa
     4981 taaccgcttg taaagcaaca aaaagcccgt tgattcaatt caacgggctt tgtttttagt
     5041 gattatttct tacgagagtg taagcctttt ttctcaaggt tacggtaaat caaccattgc
     5101 tgtgcaatcg tgattaagtt tgaggttaac cagtaaagca ctaagcctga tgggaaccat
     5161 aagaagaaca cggtaaagat aaccggcata aaggtcatta ctttttgttg taccgggtca
     5221 gctaccggtg ttggcgacat tttttgtaac aagaacatcg aaccacccat taataaaggc
     5281 aaaatgtagt atgggtcttg tgccgataag tcttgaatcc agccgaagaa aggtgcgtgg
     5341 cgtaattcta ccgcttccat aaatgtccaa tataaagcaa tgaaaatcgg catttggatt
     5401 aaaattggta agcagccacc cattgggttc actttttctt ctctgtagag tttcatcatc
     5461 tcttggctca tacgttggcg gtcgtcgccg aaacgttcac gcatttcagt aatgcgaggt
     5521 tgtaacatac gcatttttgc catcgaggtg tattgtgctt tggttaatgg gtaaagaatg
     5581 gttttcacta caatagtgac accgataatt gccaagcccc agttgcttac gattttttga
     5641 attgcggtta gtaaccagaa aagcggttta gcgataaacc acgcccagcc gtaatctacg
     5701 gttaagtcta ggtgatttgc tgattcgccc atttctttct gatctttaga acctgtccaa
     5761 agtttgctat ttaaattagc ctctgcattt ggcgcaatcg tagttaaagg gccacggtaa
     5821 ccgatagttg ctaccccatt attggtgcgt gaataaaggc tgttatccgc atcttggttt
     5881 ggcacccaag cagacacgaa atagtgctgt aataccgcaa tccaacccgc tttggtgtcc
     5941 acgcttaagt tggctttttc catatcttgg aaactgtatt ttttgtagtt ggtttctgaa
     6001 gaagaataag ccccgccggt gtaagtcggc atggttaaat tgccggaact ttcaactata
     6061 gagtgtttta attgcccgta aggctgaact tcaatcgctt gtgcagtatt atttttgata
     6121 ttgaagttta ccccaacatc gtagctacca cgttttagcg tgaaagtttt ggtgtaaacc
     6181 acaccctctt tttcaaaggt taatggtaca gaaatttcat tttgcccttc ggctaatttg
     6241 aagctatctg ccgttaccgc atattgtggg cgaccggcat tggtatcaat cccgttttta
     6301 cccactaaac cgctttgagc aacgtagatt ttgtcgccgt cttgctgtaa tagtttaaat
     6361 ggcgtgttag agtgtaattc agcattgtgt tttaacaaat ctgagccgat gacatcaccg
     6421 cctaaggtat caatagtcag acgtaataca tcgctttcca cggtaatggt tttaccttgc
     6481 gtgatgctat ctgcgattgg attattggca ttggaagcag acggaagatc acccgcttgt
     6541 tgggtttgtg ctgccacttg agcttgtttt tgtgcttgaa tttcaggatc aaaatcttgt
     6601 tgccattgtg taaaaatcaa aatagacaca agaaataaac ccattagcag taagccacga
     6661 ttattcatgt tggaattctc ttgttagtaa tggataaaaa gaaaggtatt ttataatagg
     6721 ttagcttgtt ttccaaacgc cttttatgaa caagcggtcg gattttccaa gttttttgca
     6781 aaattttcgg agaatttgac cgcttgtgga gaataagaaa ctagcgttta tctaaggttt
     6841 tggtggaaag gcgagcaact gcacacaggt taccttgttc gtctttaatg tcgatattcc
     6901 aaacctgtac ttcacgccct aatttcagcg gtgtagcttt ggcaatcgct tttgtgcctg
     6961 ccggaatcga ttttaaatgg ctgatgttta gctccattcc caccgcaatt tgatggggtt
     7021 cacacaccat taacgcccct gcattggcag tagtttccgc gagtgctgcc gatacaccgc
     7081 cgtgcaatac gccaaacggc tgttgagtgc gttcgtccac ctgaagctgt gcttcaatcc
     7141 aatcttcacc gatagcggta aattcaatcc ctaagtgtga caccgccgat ttttggctga
     7201 gtgtgtttaa ttgttcacaa gttgctgttt gcttccaaat ggtcattatt atttcctgtc
     7261 taataaaaaa gctgtctatt tagacagctt tcattatctc tttgagcgaa acatactacg
     7321 ccaatagtac attgtttggt cgcccatatt accttaagcc atatagcact aaggaggtga
     7381 tttatgtgag aaaatcagaa gttttctttc tggttgcgtt gctaatatta ttagcaactt
     7441 ccgctagcat taaagtactc accatacttg atgtgctagt ttggttattc gctagataac
     7501 ctaaaatcag acagaggcag gctggttacc tgcctcgctt tttattctaa gtacttttag
     7561 gttacatttc aaccttaaat cacgtccagc aacgcttgaa ttgggtgttt aatgccttgt
     7621 tgttcaaaac gtttgacttg cgagcggcag gagtagccgg ttgctaggca acgctcaagc
     7681 ggtttatttt ttaatttaat ttgccatgat tgctgataaa tcgctttcga catttcaacg
     7741 tgtttggttt cgtgtccgaa cgtgcctgcc attccacagc aaccgacatt ttcattgagt
     7801 aaggtttcac caaaatgggt gaaaatagct tgccactctt tcattgagct tggcaaggcg
     7861 gtggattcgg tgcagtgagc aaataaatac cacggcaagc ggtcggaatt tgccgatttt
     7921 ttgcaatttt ccagctcgcc gtttttaatc acttccctta accattcgtg tgccaataag
     7981 actttgaaat ccccccgagc ttctttgagg atctctttgt attcttcacg ataaagcaaa
     8041 gttaaggcag gatcgacagc caccatcggt agccccaatt tcgccacacg gtttaaaaaa
     8101 tcggcttggt ttttcgctgt tttcgcaaat ttatgcaaaa agcctttaac gtgttgtgct
     8161 ttaccgcttg gcttgaatgg caacacaatc ggcttaaagc ctaatttttt aatgagagcg
     8221 ataaagtctg ccaccacttt ggcatcgtaa taagaggtaa acggatcttg cacaataaac
     8281 aaggttttgc aattttttgc agaaaaatca ccgcttgtag cttgttgttc aaggctttct
     8341 aagctctcgc cttggtagcc gacttccacc aactgatgtt gcagatttgg cactgacaat
     8401 gccggcaaat aggtcattcc aatggttttg tttgcagctt tttcggcaaa agttgaggtg
     8461 ctgaaaaagt taaaaaaacg tggttgtttc gccattaaag gggcgataaa ttctaagttt
     8521 gagaccacat aatctttcag tggtcgcaaa tagcggctgt ggtaaagctc gttaaattgc
     8581 gatctgaacg tcggtacgtc aattttgatt gggcattggc tggcacaggc tttgcaggca
     8641 aggcaggtgt ccatcgccgc tttgacttcg tgtgaaaaat catactcttt gtttttattg
     8701 agcgtgttgc gaatttttgc aacaaaatca gctaatttga ccgcttgttt gcgaggtttg
     8761 aagatcaaat cgtccggcga aacgttttgt tcggtaagta atctgagcca ttcacgcaca
     8821 agagtagccc gccctttcgg tgagtaaaga cggttgcccg agactttcat tgaagggcac
     8881 atcgtgctgt gtacatcaaa gttaaaacat agcccgttgc cgttacaatt cattgctcct
     8941 ttaaattctt ctcgcacttg gattggaatt tggcggtcaa aatcggctcg catttgtgag
     9001 tcaatcgggt agagcgaggt ttcgctttct aatggtgtac aaattttacc tgggttcaag
     9061 cgattgtacg ggtcaaataa ggttttgatg taacggagtt cttgccacaa agtttcgcca
     9121 aagaaacgtt cgccgtagta agaacgcata cctttgccgt gttcgcccca aatcaagcca
     9181 ccgtatttgg cggtgagttc gactacttgg tcggaaattt gcttaaaggt ttccacttgg
     9241 gctttgtcgc ataagtcaag agcagggcga acgtgtagca cgccggcatc aacgtggccg
     9301 aacattccgt aaggcagatt atagcgatct aataaagctc gaaattccac gatgtaatcg
     9361 gcaaggtttt ccggtggcac agcggtgtct tctacaaagg cgatcggttt tgcccagcct
     9421 ttggcattgc ctagcaggcc tacggctttt ttccgcattg cgtagatttt ctcgatagaa
     9481 tttacatcac tcgtgagttg gtagccgata atcccggctt cattatttgc cattttttga
     9541 tcaaggcttt ggcagagtgc tttcacttgg gtttcaattt gagtctgatc gcttgaggca
     9601 tattcaacaa tgttaatccc taaaatcggg ttggctgggt cttcggttaa taaatctgac
     9661 accgaatgcc agacgatatc ttgcttggca agattgagca ctttggaatc aaccgtttcc
     9721 accgataagg cttttgcctc taacataaaa ggagcggagc gtaaggcggc atcaaaggaa
     9781 ttatatttaa tattaattaa ggtgcgatat ttgggaatcg gcagtaaatt cagtttggct
     9841 tcgcaaataa aggcaagcga accttcagaa ccggttaaaa tacgggtaag gttaaattcg
     9901 ctttcaccat ggttaaacac attttttaaa tcatagccgg taataaaacg gttaagctga
     9961 ggcagttcgt tcagcacttt ggggcgtaat gttttgcaac ggttgaaaat ttcacggtgc
    10021 aaggttttgc cgagagcgga gagatttaac ccttcaatat gtgcaaaaaa atcggcagat
    10081 ttgaccgctt gtgtctctaa aatatcgccg ttaataagca cagatttgat ggcaagaata
    10141 tgatcagatg ttttgccata ttgcaaagaa ccttgcccag aggcatcggt gttgatcatt
    10201 ccgcctaaag tcgctcggtt actggtagaa agttcggggg aaaagaaaag tccatgtggt
    10261 tttaaaaatt gattgagctg gtctttcacc acgccagcct gcactcgaac ccaacgctct
    10321 tccacattca gttccaaaat ctgattcata tggcgggaga gatcaacaat aatattattg
    10381 ttaagagatt gcccgttagt gcctgtgcca ccgcctcgtg gagtaaaagt taaatgttga
    10441 tattctggct tttgggcaag tttggttaga attacgacat cagaaacgga tttcggaaac
    10501 agaatagctt gcggaatttg ctgatacacg ctgttgtctg ttgccagtga aagcctatct
    10561 gcataatttg atgcaatttc cccactaaaa tgctgattga cgagttcagt taaataggat
    10621 tgggtggctt tatccagttg cggtacttca gagagtctag gtatcataag ctg
//
LOCUS       DANLTI010000093        10628 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.093, whole genome shotgun sequence.
ACCESSION   DANLTI010000093 DANLTI010000000
VERSION     DANLTI010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10628
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.093"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            59..805
                     /gene="znuC"
                     /locus_tag="PXB09_001917"
     CDS             59..805
                     /gene="znuC"
                     /locus_tag="PXB09_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDL5234002.1"
                     /translation="MVSLENIEVSFNGQKALQNINLSIYPNSITTIVGPNGGGKSTLL
                     KILLKLLSPNKGKVIHQKGLKIGYVPQKLHLEPSMPITVYRFLALKPHTTKEMINQAL
                     DLFSITHLTENSMQKLSGGELQRVLLARAILDRPQLLVLDEPMQGVDIIGQTELYQLL
                     NKTRDLLNCAILMVSHDLNIVMANTDEVLCINKHICCAGSPEVITHDPSFIHFFGDQF
                     ARNVAFYSHKHNHHHNLHGDICLGECSCEH"
     gene            970..3783
                     /gene="sucA"
                     /locus_tag="PXB09_001918"
     CDS             970..3783
                     /gene="sucA"
                     /locus_tag="PXB09_001918"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDL5234003.1"
                     /translation="MQYTHFDDWLASSALGGANQSYIEEIYEQYLENPANVDESWRNI
                     FDSFPKTPQVEQAHTPIRDYFRKLAREQQPQSVTIIDPEAGAKQVRLLQWINAHRFRG
                     YLEAKLDPINYYRWKTSSVPELDYKYHGFTDEDLNETFTVGRYVYDKDTMKLSELDKA
                     LKETYLGPIGLEFMHVQDIEQRNWLQAKMESVLNKPLFTKAEKLNLLSELTAADGLER
                     YLGAKFPGAKRFSLEGSDAFIPMMKEIIRHASRQGMTDVVLGMAHRGRLNMLVNVFGK
                     RPAELFDEFAGKHADESRTGDVKYHQGFSSNFAVDDKNVHLTLAFNPSHLEIVSPVVI
                     GSVRARQERMRDIEHEKVLAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVIN
                     NQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRD
                     IFIDLISYRRHGHNEADEPLATQPMMYSIIKKHPTPRKVYADRLITEGVLTNEQEIEM
                     LNLYRDALDNGECVVPEWREMDMAAVDWLQYLNYDWTALYESKFPEERFLTIAKRVCE
                     YPASLKAHSRVEKIYTDRKEMYEGKKLFDWGMAETMAYATLLDEGTHVRLSGEDAGRG
                     TFFHRHAVIHNQNDGTGYVPLTQLHANQGRFQVWDSVLSEEAVLAFEYGFATTDPKTL
                     TIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARVERY
                     LQLCAQQNIQVCVPSTPAQVYHMLRRQAIRKMRRPLVAITPKSLLRHPLAVSSLDELI
                     NGSFQNVIGELDNIDPKQVKRVVMCSGKVYYDLIEKRRENNQTDVAIIRIEQLYPFPL
                     EEMQQILEPYAHVKDFVWCQEEPLNQGAWYCSKHNFEASLPEDAKLTYAGRPASASPA
                     VGYPSLHAKQQKQLVEDALTIAE"
     gene            3886..5115
                     /gene="odhB"
                     /locus_tag="PXB09_001919"
     CDS             3886..5115
                     /gene="odhB"
                     /locus_tag="PXB09_001919"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDL5234004.1"
                     /translation="MTIEILTPDLPESVADATVATWHKKVGDNVKRDEILVEIETDKV
                     VLEVPASSDGILAEITQEQGATVVSKQSLGKLVVAKAGDISSATIEQKTESTPSDRKH
                     AAIENSHANADDQGPAIRRLLAEHDLQAADIQGSGVGGRITREDIEKEIAKRVQINQV
                     KGSATSQNTVSTVAFNSRSEKRVPMTRLRKRIAERLLEAKNTTAMLTTFNELDMQPIM
                     NLRKTYGEKFEKQHGVRLGFMSFYIKAVVEALKRYPEINASIDGDDVVYHNYFDISIA
                     VSTPRGLVTPVLRDCDKMSMADIEKKIKELAEKGRDGKLTVEDLTGGNFTITNGGVFG
                     SLMSTPIINPPQSAILGMHAIKDRPVAIDGQVVIRPMMYLALSYDHRLIDGKESVGFL
                     VAVKELLEDPTRLLLEI"
     gene            5408..6568
                     /gene="sucC"
                     /locus_tag="PXB09_001920"
     CDS             5408..6568
                     /gene="sucC"
                     /locus_tag="PXB09_001920"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDL5234005.1"
                     /translation="MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWA
                     IKCQVHAGGRGKAGGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETC
                     NIDRELYLGAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQG
                     RELAFKLGLKGDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSI
                     DSNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLYGGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIA
                     AVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAELAVKSAN"
     gene            6577..7446
                     /gene="sucD"
                     /locus_tag="PXB09_001921"
     CDS             6577..7446
                     /gene="sucD"
                     /locus_tag="PXB09_001921"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDL5234006.1"
                     /translation="MSILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKG
                     GTTHLGLPVFNTVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPT
                     LDMLQVKQRLNQTGVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYE
                     AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEA
                     AAFIKENVTKPVVSYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRS
                     LAEIGSALRKILG"
     gene            complement(7517..8962)
                     /locus_tag="PXB09_001922"
     CDS             complement(7517..8962)
                     /locus_tag="PXB09_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDL5234007.1"
                     /translation="MDSIILFFESVLTWIVNTIDGPLWDVTIILLLGAGLFFTLTTGF
                     VQLRLLPQSLREMWGGRSTEGKSLTPFQAFTTGLASRVGVGNIGGVATAIALGGPGAV
                     FWMWITALMGMSSAFAESSLAQLYKTKDPNGMFRGGPAYYITRGLKLPSLAIAFAVTL
                     IFTFGFAFNAVQSNSIVEATKNAWDWNPVYVGMTLVVITGLIISGGVKRIGKVSAQVV
                     PMMALFYLIIAVIILGMNIEKVPSIISLIIESAFDFSAAAGGTFGALVSKTMLMGIKR
                     GLFSNEAGMGSAPNSAATSDAKHPASQGLIQMLGVFVDTIVVCTCTAVIILMSNNYGG
                     ETLRGISLTQSALQFHLGEFGLHFLAFVILLFCFTSIIGNYAYAETNIRYIKNSPWFV
                     WGFRAIVLFFVYFGAVRDGGIVWAFADTVMASMAVINLVAILILAPIVWIILKDYLRQ
                     VKSGKEPVFRIEEHQDLIHKGVDPLIWKSKE"
     gene            complement(9067..10053)
                     /locus_tag="PXB09_001923"
     CDS             complement(9067..10053)
                     /locus_tag="PXB09_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HDL5234008.1"
                     /translation="MRLKATYWGMIVIGFLSLFALYQLYPMILFKVMEWQKNFNLQLS
                     ASLNELAENQSKAGITLVFISFLYGVFHAVGPGHGKFILSSYLSFEKTKLNQAMKITF
                     ASALVQGLVAISLVTVIVVIFTLSRQYFNLTLKWVERGSFGLMILFGIYWCYQVYRTV
                     NRARKPIIKSIRISQKKAGKLPLVTQKGHIHTENCSCRHKHLPTSNEMQQVRDWKAQL
                     MLVLSIGSRPCSGAILVLFLSYTLNLYAWGVISALAMAVGTGLTLSLFAYLVIIARNK
                     AVKVSQWYFSAQINRNIVWILKFTLGLALILFGMVLFHSSFIDAGTGVFFKR"
     gene            complement(10044..>10628)
                     /locus_tag="PXB09_001924"
     CDS             complement(10044..>10628)
                     /locus_tag="PXB09_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDL5234009.1"
                     /translation="FSHPHSFVDLKTNVIVEGSMLKSFQMEWMLDEIASSELIYEVKN
                     SQDKEKTQQNITAEMVQTALQNHYFSTLYDSQNQPIKFTTKPTATRFEIKNNRVIFYI
                     TFHLAKPHELKQSKVRFYTYEPSYYIAMEYNRPADVNTSNASCKATLVQPQVDSKLRL
                     YASGLDKNQSLDMPENGDYSLGAQFAQKVEIICD"
BASE COUNT         3357 a         2262 c         2149 g         2860 t
ORIGIN      
        1 accgaatcta aataccacta catttgaact attcaaacag aatttatccg cgacatcact
       61 ggtttctctt gagaatattg aagtgtcttt caatggacaa aaagcattac aaaatattaa
      121 tttatctatt tatcctaact ctatcacgac gatagtcggg ccaaatggtg gaggaaaatc
      181 taccctgctt aaaattttgc taaaattact tagcccaaat aaaggaaagg ttattcatca
      241 aaaaggactc aaaattggct atgtaccaca aaaattgcat ttagaaccct cgatgcccat
      301 tactgtttat cgatttcttg cgctaaaacc acatactacc aaagaaatga ttaaccaagc
      361 actagatctg ttttctatta cccatctcac tgaaaatagt atgcaaaaat tatcgggtgg
      421 tgaacttcaa cgtgtattgc tggctcgggc aattttagat cgtccgcaac tcttagtgtt
      481 agatgaacca atgcaaggcg ttgatattat aggccaaacc gaactctatc aattacttaa
      541 taaaacaagg gatctcctta actgtgctat tttaatggtc tcacacgact taaatattgt
      601 gatggcgaat acagatgaag tgctttgcat caataaacat atttgttgtg ccggaagccc
      661 cgaagtcatt acacacgatc cgagctttat ccattttttt ggcgaccaat ttgcacgtaa
      721 tgttgcattt tattcacata aacataacca tcaccataat ttacatggcg atatctgcct
      781 tggtgaatgt agttgtgagc actgataggc gtccttttta ccaaatgttt aaaatttgta
      841 aaaataatgc taaaaataac cgcttgcagc acaagattta tctaaaaatc agacttactt
      901 cacattttat ttgcttaaat tggagtataa taagggcgtg atttcatacc acaaacaggt
      961 caggtcttta tgcaatatac acattttgat gattggcttg catcatctgc attaggcggt
     1021 gcaaaccaat cttatataga agaaatttat gaacagtatc tagaaaatcc agcaaatgtt
     1081 gatgaaagct ggagaaacat ctttgattca tttcctaaaa ctccccaagt tgaacaagct
     1141 cacaccccta ttcgtgacta tttccgtaaa ttagcccgtg aacagcaacc tcaatccgtc
     1201 actattattg acccagaagc aggggcgaaa caagttcgct tactgcaatg gattaacgct
     1261 caccgtttcc gtggctattt agaggcaaaa ctagacccaa ttaactatta ccgttggaaa
     1321 acctccagcg tgcctgaatt ggactacaaa tatcacggct tcaccgatga agatctcaac
     1381 gaaactttta cggtcggtcg ctatgtctat gataaagaca caatgaagct cagcgaactg
     1441 gataaagccc taaaagaaac ttatttaggg cctattggtt tagaatttat gcacgttcaa
     1501 gatattgaac aacgcaactg gcttcaagcc aaaatggaaa gcgtgctaaa caaaccgctg
     1561 ttcaccaaag cagaaaaact gaatttatta agcgaattga ccgctgccga tggtttagag
     1621 cgttacttag gggcaaaatt cccgggggca aaacggttct cattggaagg tagtgatgcc
     1681 tttattccga tgatgaaaga aattatccgc cacgcttccc gtcaaggtat gaccgatgtg
     1741 gttttaggta tggcacaccg tggtcgtttg aatatgttag tgaacgtatt tggtaaacgc
     1801 ccggcagaat tgtttgatga atttgccggc aaacacgctg atgaaagccg cacgggcgat
     1861 gtgaaatacc accaaggttt ctcctcaaac tttgccgtag atgataaaaa cgttcacctt
     1921 acccttgctt tcaacccatc gcatttagag attgttagcc cggtggtaat cggctcagtg
     1981 cgtgcaagac aagaacgtat gcgtgatatc gaacacgaaa aggtgcttgc ggtgaccgtt
     2041 cacggtgact ctgcagtggc agggcaaggt gtagtgcaag aaaccttaaa tatggcaaat
     2101 gttcgtggct ataaagtagg aggcactatc cgtattgtga tcaacaacca aatcggattt
     2161 accacctcta acccaaatga cacccgctcc accgaatttt gtaccgacat tgccaaaatg
     2221 attcaggcac cgattattca cgttaatggt gatgatccgg aagctgttgc ctttgcagcg
     2281 agaatggctg tggaatatcg tactaaattt aaacgtgata tttttattga tttaatctct
     2341 taccgtcgtc acggtcataa tgaagccgat gagcctttag caactcagcc aatgatgtat
     2401 agcatcatca aaaaacaccc gacacctcgc aaagtctatg cggatcgttt aattaccgaa
     2461 ggtgttttaa ccaacgagca agaaatcgag atgttaaacc tgtatcgtga tgccttagac
     2521 aacggcgaat gcgttgtgcc ggaatggcgt gaaatggata tggcagcggt cgattggcta
     2581 caatatctca attacgactg gactgcccta tacgaaagta aattccctga agaacgattc
     2641 ttaaccattg ccaaacgggt gtgcgaatat ccggcttcgc ttaaagctca ttctcgggtt
     2701 gaaaagatct acactgatcg caaagagatg tatgaaggca agaaattatt cgactggggt
     2761 atggctgaaa caatggcata cgctactttg ttagacgaag gcacacatgt tcgcctttca
     2821 ggagaagatg ccggacgtgg cactttcttc catcgccatg cggtaatcca taaccaaaat
     2881 gatggaacag gctatgtgcc acttactcaa ctgcacgcca atcaagggcg tttccaagta
     2941 tgggattccg tactctctga agaagcggta ctcgcctttg aatatggctt tgccactacc
     3001 gacccgaaaa cactgaccat ttgggaagct caatttggag atttcgctaa cggagctcaa
     3061 attgttatcg accaatttat cagctcaggc gaacaaaaat ggggcagaat gtgcggttta
     3121 gtgatgttat taccacacgg ctatgaaggt caagggccgg aacactcctc tgcccgagtg
     3181 gaacgctatt tacagctttg tgctcagcaa aatattcaag tttgcgtgcc atcaacaccg
     3241 gcacaggttt accatatgtt acgccgtcaa gcgatccgca aaatgcgtcg cccattggtt
     3301 gcaatcacac caaaatcatt gctacgccac ccacttgcgg tgtcatctct tgatgaattg
     3361 attaacggtt cattccaaaa tgtgattggc gagctcgata atatcgatcc taaacaagtc
     3421 aaacgtgtgg tgatgtgttc gggtaaagtg tactacgact taattgaaaa acgccgtgaa
     3481 aataaccaaa cggacgttgc cattattcgt atcgaacagc tctacccgtt cccacttgaa
     3541 gaaatgcaac aaattctcga gccttacgct cacgttaaag actttgtctg gtgtcaagaa
     3601 gagccactaa accaaggtgc gtggtattgc agcaagcaca attttgaggc ttctctgccg
     3661 gaagatgcaa aattaactta cgcaggcaga ccggcttctg cttcaccggc ggtgggttat
     3721 ccatcgttac acgcaaaaca acaaaaacaa cttgttgaag atgctttaac gatcgctgaa
     3781 taataaaatg ggcgtatata cgccctacaa gcggttcact tttaaccaaa ttttacaatt
     3841 tacgctgtcg gagttttaaa actctctcga aaaaaggaat aagttatgac cattgaaatt
     3901 ttaacccccg atttacccga atctgttgcc gatgcgaccg ttgccacttg gcataaaaaa
     3961 gtgggcgaca atgtaaaacg tgatgaaatt ttagtcgaaa ttgaaacaga caaagtcgtt
     4021 ttagaagtac cggcttcaag cgatggtatt cttgcagaaa ttacccaaga acaaggtgct
     4081 actgttgtat ccaagcaatc tctgggtaaa ttagtagtag ctaaagccgg tgatattagc
     4141 tctgcaacta ttgagcaaaa aacagaatcc acgccatcag accgcaaaca cgcagcaatt
     4201 gaaaacagcc acgcgaacgc tgatgatcaa gggcctgcga ttcgccgttt attagccgaa
     4261 cacgacttac aagccgctga tattcaaggc agtggtgtag gcggcagaat cacccgcgaa
     4321 gatattgaaa aagagattgc caaacgagtg caaatcaacc aagtaaaagg gtctgcaacc
     4381 agccaaaaca ccgttagcac tgtagcattt aacagccgta gcgaaaaacg tgtgccgatg
     4441 acacgactcc gcaaacgtat tgccgaacgc ttactagagg caaaaaacac cactgcaatg
     4501 ctcactactt ttaacgagct ggatatgcaa ccaattatga atttacgcaa aacctatggc
     4561 gaaaaattcg aaaaacaaca cggtgtgcgt ttaggcttta tgtcgttcta cattaaagcc
     4621 gtggttgaag cattaaaacg ctaccctgaa atcaatgcct ccattgatgg cgatgatgtg
     4681 gtttatcata actatttcga catcagcatt gcggtttcta ccccacgagg cttagtcaca
     4741 cctgtgttgc gtgattgcga caaaatgagt atggcagata ttgagaagaa aattaaagaa
     4801 cttgccgaaa aagggcgtga cggcaaatta accgttgaag acttaaccgg cggtaacttt
     4861 accatcacca acggcggggt attcggttca ttaatgtcca ccccaattat caacccgcca
     4921 caaagtgcga ttttgggtat gcacgctatt aaagaccgcc ctgtcgccat tgacggacaa
     4981 gtagtgatcc gcccgatgat gtacctagcc ttaagctatg accaccgttt aattgacggt
     5041 aaagaatctg tcggtttctt agtggcagtt aaagagttat tagaagaccc aacccgtctt
     5101 cttttggaaa tttaatcgaa aatatgaccg cttgtacttt tagctacaag cggtctgttt
     5161 ttaataaaat ttgacaaaat ccgataaacg ctctatttga gttcccttct gagccacctg
     5221 agcgactttg aatttgtagg aaaaatttag tgtttgagct tacaaggcaa gcgagttata
     5281 aatttttccg tcaagcaaat tcaaactaag cgaagaaagt ggcgaagcag ggtgtgcttt
     5341 cttttggtta cttttctttg cacaagcaaa gaaaagtaac ataaaaaaaa ccaaacgagg
     5401 aaactctatg aatctacacg aatatcaagc aaaacaaata ttcaaacaat acgggcttcc
     5461 cgtaagccaa gggattgctt gcaaaacggc agaggaagcc gttgaggcaa ttaaacaact
     5521 acaaggtgaa caatgggcga taaagtgcca agttcacgct ggtgggcgtg gcaaagccgg
     5581 cggggtgaaa ctggttcgca atgaagccga agtgcgtgaa tttgccgata aatggctcgg
     5641 caaacgctta gttaccttcc aaaccgatgc taatgggcaa ccggttaata ccttatattt
     5701 agaagaaacc tgcaatatcg accgtgaatt gtacttaggt gcagtggttg atcgctccgc
     5761 tcaaaaagtg atttttatgg catcaagtgc cggtggtatg aatattgaag aagtagcgga
     5821 gaaaacccct gaattaattc acaaagcggt aattgaccca ctcaccggtg ggcagggtta
     5881 tcaagggcgt gaattagcat ttaaattagg cttgaaaggt gatgaagtta aacaatttgc
     5941 ggatattttc gtgaaactgg ctaacctatt tgttgaaaaa gatttagctt tattagaggt
     6001 aaatccactt gtcatcacta aagaagggca actactctgc ttagatgcaa aaatgtcgat
     6061 tgacagcaat gctctctacc gccacccaga acttaaagag ttgcaagacc catcgcaaga
     6121 tgacgaacgt gaagctgaag cggaaaaatg gaatctcaac tacgttgcac tagatggcaa
     6181 tatcggctgt atggtaaacg gtgcggggct ggcaatgggg acgatggata tcgtcaaact
     6241 ttatggtggt aaaccggcta acttcttaga cgttggcggt ggtgcaacca aagagcgtgt
     6301 agcagcagct tttaaattga ttttatctga tccgaatgtg aaagccgtgt tagtcaatat
     6361 ttttggtggt atcgtccgct gcgatttgat tgctgatggc gtcattgctg ctgtaaacga
     6421 agtcggcgtg aatgtgcctg ttattgtgcg tttagaaggc actaatgccg cacaggggcg
     6481 tgagatttta gccaatagcg ggctgagtat tctagcggca tcatcattaa aacaagcggc
     6541 tgaattagcg gtaaaatctg caaattagga ggaaaaatgt cgattttaat tgataaaaac
     6601 acaaaagtaa tttgccaagg tttcaccggc ggacaaggta ctttccacag cgaacaagcc
     6661 cttgcttatg gcacacaatt agtcggcgga gtttcgccga ataaaggtgg cacaacccat
     6721 ttaggcttac cggttttcaa caccgtacgc gaagcggtag aagcaaccgg tgcaactgca
     6781 accgttatct acgttccggc tcccggctgt aaagatgcta ttttagaagc cattgatgcc
     6841 ggcatccaac taattgtctg tattactgaa ggcattccaa ccttggatat gctacaagtt
     6901 aaacaacgtc taaaccaaac cggcgtgcga atgatcggtc cgaactgccc gggtgtgatt
     6961 acccctgatg agtgcaaaat cggcattatg ccgggcaata tccacaaaaa aggcaatatc
     7021 ggtattgttt ctcgttcggg tactttaacc tatgaagcag ttaaacaaac aactgacgaa
     7081 ggctttggtc aatctacttg tgtcggtatc ggtggtgatc cgattccggg atctaacttt
     7141 attgacattt taaaactgtt ccaagacgat cctgaaactg aagcaattgt gatgattggt
     7201 gaaatcggcg gctctgccga agaagaagcg gcagctttca tcaaagaaaa tgtcaccaag
     7261 cctgtagtca gctatattgc cggtgtcacc gcaccaaaag gcaaacgaat gggacacgcc
     7321 ggtgcgatta tcagcggcgg caaaggaacc gccgatgaaa aattcaaaat ccttgaagat
     7381 gccggtgtga caaccgtcag aagtttagcc gaaatcggtt cagctcttag aaaaatttta
     7441 ggctaaacta aaagttcaag cagtcatatt tacccatttt tttgtaaata tgaccgcttg
     7501 tttttttgct attaaattac tctttcgatt tccaaattaa tgggtcaaca cctttatgga
     7561 taaggtcttg atgttcttca attctaaaca ctggctcttt gccacttttc acttggcgaa
     7621 gatagtcttt taaaataatc cagacaatcg gagcaagaat taagatagcc accaagttaa
     7681 ttaccgccat tgatgccatc actgtatcgg caaatgccca tacaatccct ccgtctctta
     7741 ctgcaccgaa gtacacaaag aataaaacga tggcacggaa tccccacaca aaccacggac
     7801 tgtttttaat gtagcggata ttagtttctg cataagcata gttaccgata atggatgtga
     7861 agcaaaacag taaaatcaca aatgctaaaa agtgtaaacc aaattcacct aaatggaatt
     7921 gtaacgcact ttgagtaagt gaaatacctc ttaaagtttc accaccatag ttatttgaca
     7981 taagaatgat cactgcagta caagtacaga ctacaattgt atctacaaat acgcccaaca
     8041 tttgaattaa gccttgactt gccgggtgtt tcgcatcaga agtcgctgca gaatttggtg
     8101 cagatcccat accagcttcg tttgagaata agccacgttt aatccccatt agcatagttt
     8161 tggataccaa tgctccaaac gttccacctg cagcagcaga aaaatcaaag gcgctttcaa
     8221 taattaaaga gattatactt ggcacttttt caatattcat acctaaaata attactgcaa
     8281 taatcaagta gaataatgcc atcattggaa caacttgggc agaaacttta ccaatacgct
     8341 tgacccctcc agaaataatt aaccctgtaa tcaccactaa tgtcatgcct acgtagactg
     8401 ggttccaatc ccacgcattt ttggttgctt ccacaataga gttagattgc acagcattaa
     8461 aagcaaaacc aaaggtgaag ataagcgtca ctgcaaaagc aatagcaaga gaaggcagtt
     8521 ttaaaccacg agtgatgtaa taggctggcc caccacgaaa cattccgttt ggatctttgg
     8581 ttttatacaa ctgagccagt gaagactcag caaaggcgga actcattccc attaaggcgg
     8641 taatccacat ccagaatacc gcacccggcc cacccaaagc gattgcagta gctaccccac
     8701 caatattacc aaccccaaca cggctggcta atccagtagt aaaggcttgg aacggagtta
     8761 atgatttccc ttccgtagaa cgtcctcccc acatttcacg taaactttgc ggaagaagac
     8821 gcagctggac aaaacctgtt gtaagagtga aaaataaccc tgcaccgagc aataggataa
     8881 tcgttacatc ccaaagtgga ccgtcgattg tgttcacaat ccaagtcagt acactctcaa
     8941 aaaatagaat aattgaatcc ataaagacct cttaattgaa aataaaactt ccacattgta
     9001 accgatttaa tatttttaaa aagttttttt aatactttta ataaaaattt ttaataactt
     9061 attaatttag cgtttgaaaa aaacgcctgt accagcatca atgaaactac tgtgaaataa
     9121 taccattcca aatagaatta atgcgagtcc aagtgtaaat tttaatatcc aaacgatatt
     9181 tcgattaatt tgagctgaaa aataccattg gctaacctta actgccttat ttctcgcaat
     9241 gataacaaga taagcaaata agcttaaagt cagccctgtt cctactgcca tagctaatgc
     9301 tgaaataacc ccccaagcat agagattgag cgtataagaa agaaataaaa caagaatagc
     9361 gccagagcaa ggtcttgagc caatacttaa taccaacatc agctgtgctt tccaatctct
     9421 cacttgttgc atttcatttg aagtcggtaa atgtttatgc ctacagctac aattttcggt
     9481 atgaatatgc cctttctgcg tgacaagcgg taattttcca gctttttttt gcgaaatacg
     9541 aatggattta atgataggct ttcgcgctct gttcaccgtt cgatacacct ggtaacacca
     9601 gtaaatgccg aacaagatca tcaaaccaaa gctcccccgc tcaacccatt ttagggttaa
     9661 attaaaatat tggcgagaga gagtaaaaat caccacaatc accgtcacca atgaaattgc
     9721 cactaagccc tgcaccaatg ctgaggcaaa agtgattttc atcgcctgat ttaattttgt
     9781 tttttcaaaa gaaagataac tgctcagaat aaattttccg tgaccaggcc caactgcgtg
     9841 aaatactcca tataaaaaac taataaatac taaggtaata ccggctttac tttgattttc
     9901 agctaattca ttgagcgaag cggaaagctg taaattaaag tttttttgcc attccatcac
     9961 tttaaacaat atcattggat aaagctgata aagagcaaat aggctcaaaa atcctatcac
    10021 tatcattccc caatatgttg cttttaatcg catataatct ccactttttg agcaaattgg
    10081 gcaccaagag agtaatctcc attttcaggc atatccagtg attggttttt atccaaaccg
    10141 gaagcatata agcgtaactt actatctact tgaggttgca ccaatgttgc tttacaactt
    10201 gcattactgg tattgacatc agcagggcga ttatattcca tcgcaatata ataactcggt
    10261 tcataagtat agaatctcac tttactctgc tttaattcgt gaggtttagc taaatgaaaa
    10321 gtaatataaa aaatcactct gttattcttg atttcaaagc gagtcgctgt gggctttgtc
    10381 gtaaatttta tcggctgatt ttgactatca tataaggtgc taaaataatg attttgcaat
    10441 gcggtttgca ccatttctgc agtgatattc tgctgagttt tttctttatc ttggctattt
    10501 ttcacttcat aaattaactc agaagaagca atttcatcta gcatccattc catttggaaa
    10561 gatttcaaca ttgagccttc cacaataaca ttcgttttca aatcaacaaa tgaatgtggg
    10621 tgagaaaa
//
LOCUS       DANLTI010000094        10586 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.094, whole genome shotgun sequence.
ACCESSION   DANLTI010000094 DANLTI010000000
VERSION     DANLTI010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10586
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.094"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            20..676
                     /locus_tag="PXB09_001925"
     CDS             20..676
                     /locus_tag="PXB09_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234010.1"
                     /translation="MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTT
                     KPNSENILDLSTVLQCDISWLLRGNGESNVLPASLGMTKVPLISYIQAGQWTGIDDFR
                     ETCGDYEYILTDLEVSEDAFALEIKGDSMEPDFIEGDRVIIDPDVQPHAGEFVAAING
                     DYEATFKKYRPLEDLDEYGRQHFELIALNPDYHKLSTLKQEIRIIGTMVEHRIYRRKR
                     "
     gene            688..1062
                     /locus_tag="PXB09_001926"
     CDS             688..1062
                     /locus_tag="PXB09_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234011.1"
                     /translation="MTEFKDVKQAIVEAQLASTPKDKVVNDIMKGSAELLSANDIINR
                     LGIGADEFQELVNLPNHYLRINGGLGAAVYNTRRMFDTHVELVNQELEKNISFPKPDL
                     YILGKARWKKETFKKWLEEQCR"
     gene            1214..1951
                     /locus_tag="PXB09_001927"
     CDS             1214..1951
                     /locus_tag="PXB09_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5234012.1"
                     /translation="MLSKQVLSISESRLSTYLFCFFRNDPTKQKEAIAIYTALQHRTG
                     IYFSLIQEIEVALRNEVSQLLRFAAPNHNLYEFFHFLANDSNAPLNAESKRQLQKAIS
                     ECGRNYNENDIISHISFGFWVNLFNYDIKRNQYVAYWQSVLKPIFGHRFSNFKDLYNT
                     LKQIMRFRNRLYHQEVVWNKRIAKKPTHALENLEKTYKQFELALQKIAPERFAFRQLS
                     QALIWQRQIFFDQQIFEAEIVILPQHI"
     gene            complement(1987..2583)
                     /locus_tag="PXB09_001928"
     CDS             complement(1987..2583)
                     /locus_tag="PXB09_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234013.1"
                     /translation="MKKLLMTLCCLPAFALANETGESCSKIEDSAKRLECYDSVFVKK
                     DTGKDEATDEKSNWEYEQKKDELRNATTYFAKIRSTNTIDFGFPYNSSSMNLMLRKDP
                     KYGNDVIFSVHGQFNGCMIESCKITVKFDDGKLESYRMIGADGGSNDTLFIENAKAMK
                     TFVDKLKKSKKLIVEASFYNYGKGQFTFDTQGLEWKHF"
     gene            3229..3414
                     /locus_tag="PXB09_001929"
     CDS             3229..3414
                     /locus_tag="PXB09_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234014.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGFWQ
                     MESNGNQYCGGKYGTKN"
     gene            3398..3595
                     /locus_tag="PXB09_001930"
     CDS             3398..3595
                     /locus_tag="PXB09_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234015.1"
                     /translation="MARKIDAGVEIVEVDKRFIAKFFYDGKLQHTTYPQYNRQNAIML
                     INRKIERFNIGRDKPIKLYKE"
     gene            3598..4572
                     /gene="ssb"
                     /locus_tag="PXB09_001931"
     CDS             3598..4572
                     /gene="ssb"
                     /locus_tag="PXB09_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5234016.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKTS
                     GEKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSNSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIRVRWITKEQA
                     KQFINNISTDWMKTICSFALLTGARRTEILSMTWDKIDFIRKVAIVSNDIAKSEKARS
                     LLLNDDAIELLQKQRGKNPKYVFVGSKGQALQDINRKIFNKATEKCLLVDFHFHDLRH
                     TWASWHVQAGTPLFTLKELGGWETLEMVKKYAHLNADHLLNHANSVKF"
     gene            complement(4659..4735)
                     /locus_tag="PXB09_001932"
     tRNA            complement(4659..4735)
                     /locus_tag="PXB09_001932"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4699..4701),aa:Arg,seq:tct)
     gene            complement(4760..4836)
                     /locus_tag="PXB09_001933"
     tRNA            complement(4760..4836)
                     /locus_tag="PXB09_001933"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4800..4802),aa:Pro,seq:tgg)
     gene            5006..5866
                     /gene="folD"
                     /locus_tag="PXB09_001934"
     CDS             5006..5866
                     /gene="folD"
                     /locus_tag="PXB09_001934"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDL5234017.1"
                     /translation="MTAQIISGSEVSSQIKKKVSEKIAHYLEQGKRNPGLAVILVGND
                     PASQVYVGSKRKSCAEIGIASKSYDLPEETTEAELLALIEKLNQDDSVDGILVQLPLP
                     KQIDSTKVIEAILPHKDVDGFHPYNVGRLSQRIPTLRPCTPYGVMKLLETTGVDLYGQ
                     HAVIVGASNIVGRPMALELLLGGCTVTVTHRFTKDLEHHVRQADILVVAVGKPEFIPG
                     EWVKDGAIVIDVGINRGADGKLKGDVEYSVASQKAAFITPVPGGVGPMTVAMLMQNTL
                     QTYENHLQAV"
     gene            5980..7431
                     /gene="thiI"
                     /locus_tag="PXB09_001935"
     CDS             5980..7431
                     /gene="thiI"
                     /locus_tag="PXB09_001935"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDL5234018.1"
                     /translation="MKFIIKLFPEIMIKSDSVRKRFIKILTSNIRNVLLKETENVSVV
                     RHWDFIEVRAKVDEETALVLDLLKRTPGIHHILEVEETPFTDMHDIFEQTYAAVKAEL
                     EGKTFSVRVRRKGKHDFRSLDVERYVGGGLNQRIETAKVKLTNPDVTVRIDIEHDKML
                     LIKARHEGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEI
                     GVKQMAYHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRIA
                     ERFDIQAIVTGEALGQVSSQTLTNLRLIDKASDTLVLRPLITHDKEQIIAMAKAIGTD
                     DIAKSMPEFCGVISKNPTVKAIETKILEEEGNFNFEVLEQAVQTASYLDIREIAQQTE
                     KEVVSVETTTELSKNDVVLDIRSPEEVDEKPFRLDGVEVKELPFYKLSSQFSTLDQSK
                     TYLLYCQRGVMSKLQALYLKENGYSNVKVFRVK"
     gene            complement(7476..8183)
                     /locus_tag="PXB09_001936"
     CDS             complement(7476..8183)
                     /locus_tag="PXB09_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HDL5234019.1"
                     /translation="MFKEKPVISNQHGALAMAMLPFLYAVIESGFSTLHIFFGLSWLF
                     LYFFSYPFLSLFSKKPTERNKKWAKIYFGLSILFALPLIYAQPSILQFLPIILPLGLV
                     QVHYAKQKDERNLWNDIAGILTFGIMGMAAYYLVTKQYQFEILLHPTLFFIATTFYIK
                     SMVRERRNPIYMEISIAIHLVLAMLYILCSLQAVFFAYLIATARAIIVPSFGWNVKQV
                     GMLEFPVILLFLASLIW"
     gene            complement(8251..9225)
                     /gene="pfkA"
                     /locus_tag="PXB09_001937"
     CDS             complement(8251..9225)
                     /gene="pfkA"
                     /locus_tag="PXB09_001937"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDL5234020.1"
                     /translation="MSKKIKKIAVLTSGGDAPGMNAAIRGVVRTALNEGLEVCGIQDG
                     YYGLYHDKVIPLDRRSVSETINRGGTFLGSARFPDFKRPEVRKHCVETLKKYSIDALV
                     VIGGDGSYMGAKLLTEEFGYPCIGIPGTIDNDIVGTDYTIGYQTALETALDAIDRLRD
                     TSSSHQRISIVEIMGRHCGDLTLSAALAGGCEYVIVPEKGLDKDALMRSIEEGFHKGK
                     RHSIIAITELMTDVHALAKEIEARFGNETRATVLGHIQRGGSPCAFDRILASRMGVYA
                     VELLLQGFGGHCVGIQNEQLVHHDIIDAINNMRRPFKEELFEASRKLF"
     gene            complement(9332..10528)
                     /locus_tag="PXB09_001938"
     CDS             complement(9332..10528)
                     /locus_tag="PXB09_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDL5234021.1"
                     /translation="MLNTQFRTHFPFFEKSDGWTYLDSAATTLKPDVLIEATSEFYAS
                     AGSVHRSQYDLPQTEQYELARDLVAKRFNVETREAVIWTSGTTQSINTVAYGLEHQIA
                     AGDEIVISVAEHHANFIPWQQLAQRTRAKLVVLPLNDKYEIELETLKNALSEKTKIVA
                     FNLVSNVTGVRQPAEQIIPLIRQSCSAKIVLDIAQAVCSEQVDVQKLDADFYAFSAHK
                     MYGPNGVGVLTGKLQSLEQIQPLVFGGKMLKNITESELTVAELPYRLEAGTPNIAGII
                     GFGQVLAWLEKWDFVALNHQLYDLAEYTCKRLNSYQNLQIIGQQNTPTISFVVKNQHP
                     ADIAAFLTQSKIAIRQGEHCAKPYLRHLEEVGTVRLSLAHYNNQQDVEHFFNALDFTL
                     EILQES"
BASE COUNT         3345 a         2016 c         2199 g         3026 t
ORIGIN      
        1 ttacctttaa ggggatacta tgaatactca gaccttgggc gatagaatta aaagccgtag
       61 aaaagaatta aaattgacac agaaagatct tgctactgcg ttaaaagggg tctcacacgt
      121 tgcagtatct caatgggaaa gtagtacgac taagccaaat tcagagaata ttttggattt
      181 atctacagta ttgcaatgcg atattagttg gctcttgcgt ggtaatggag agtctaatgt
      241 tctacctgct agcctcggta tgactaaagt cccattaatt agctatattc aagccggaca
      301 atggacggga attgacgatt ttcgtgaaac ctgtggggat tatgaatata tcctaactga
      361 tcttgaggtg tctgaagatg cttttgccct agaaatcaaa ggggactcga tggagcctga
      421 ttttattgaa ggagaccgag taattattga tcctgatgta caacctcacg ccggtgagtt
      481 tgtggcagca attaatggcg attatgaagc cactttcaaa aaataccgtc cgttagaaga
      541 cttagacgaa tacggaagac aacattttga gcttatcgct cttaatccgg attaccataa
      601 attatcaacg ctaaagcaag aaatcagaat tatcggcaca atggtagagc atcgtattta
      661 tcgtagaaag agataggaat tgataatatg acagaattta aagatgtaaa acaggcgatt
      721 gtagaagctc aattagcttc gacacctaaa gataaagtcg ttaatgacat aatgaaagga
      781 agtgcggaac tgctttcagc aaatgatatt atcaataggt taggtattgg ggcagatgag
      841 tttcaagagt tggttaattt acctaaccat tatttgcgta taaatggagg gttaggtgct
      901 gctgtgtata atacaagaag aatgtttgat acccatgttg agttagtcaa tcaagagtta
      961 gaaaagaata tttcatttcc taaacctgat ttatatattt tggggaaagc tcgttggaaa
     1021 aaagaaacat ttaagaaatg gttggaagaa cagtgtagat aaagaaaagg taggttaaaa
     1081 aacctacctt ttctgaaccg caaataagcg attctcacac tttacaaagc aatccagctc
     1141 ctacgtctgg ggcttcgggt ccgttgccag tgcaagtatt attacattaa actaaacttg
     1201 agtaaaggaa aatatgttgt ccaaacaagt gctaagtatt tcagaaagtc ggctgagtac
     1261 atatttattt tgctttttcc gaaatgatcc cacaaaacag aaagaagcta ttgcaattta
     1321 taccgccttg caacatcgaa caggaattta tttttcattg attcaagaaa tagaggtggc
     1381 actaagaaat gaagtcagcc agttgttacg ctttgctgca cctaatcata atttatacga
     1441 attctttcat tttctagcga acgatagtaa tgctcctctt aatgcagaat ctaaacgcca
     1501 gctacaaaaa gccattagtg aatgcggacg taactataat gaaaatgaca taatttctca
     1561 tatttctttt ggattttggg taaatctgtt taattatgat ataaagcgta atcaatatgt
     1621 tgcttactgg caaagcgtat taaagcctat ttttggacat agatttagta attttaagga
     1681 tttatacaat acattaaagc aaattatgcg ttttagaaat cggctgtatc atcaagaagt
     1741 ggtttggaat aagcgaattg ccaagaaacc aacgcacgca ctagagaatt tagaaaaaac
     1801 ttacaagcaa tttgagttag cactacaaaa gatagcacct gaacgatttg cgtttcgtca
     1861 gctttcacaa gcacttattt ggcaacgcca aatctttttc gaccaacaaa tttttgaagc
     1921 tgaaatcgtt attttgcccc aacatatcta agcaaaaagc tacgcatcta tgtagctttt
     1981 tcttaattaa aaatgtttcc actctaaccc ttgtgtatca aaggtaaatt gccctttgcc
     2041 ataattgtaa aaactcgcct ctacaattag ttttttcgac tttttcaact tatctacaaa
     2101 ggttttcatt gcttttgcat tttcaatgaa aagcgtatca ttgctgccac catccgcccc
     2161 aatcattcga taactttcca atttaccatc atcaaacttc acagtaattt tacagctctc
     2221 aatcatacag ccattaaatt gaccgtgtac gctaaaaatt acatcattgc catatttagg
     2281 gtctttgcgt aacattaaat tcattgatga tgaattatac gggaaaccaa aatctattgt
     2341 gttagttgat ctaattttag caaagtaagt cgttgcatta cgcaattcat ctttcttttg
     2401 ttcatattcc caattagact tttcatcggt agcttcatct ttaccagtat cttttttcac
     2461 aaagacacta tcataacatt ctaagcgttt tgcactatct tcaatcttag agcaactttc
     2521 tccagtttcg ttagctaaag caaaagcggg caaacaacat aaagtcatca gtagtttttt
     2581 catataacct ccatagaaat cccttcttat tttctcaaaa gcgtggtttt cggtctgtga
     2641 tcaagctcgc aatctcaata attatatttt aatggtttaa aaaacaatca attaagaaat
     2701 cataactaat tgaaatttaa gaaatcttaa aaatacttat taaataagct taaattttga
     2761 ttgacttgta atttaagttt tcttaaactt aattcatcaa aacgagctac ggctcaatgc
     2821 tctttaacaa ttcggtgctt gtgcggacga tattaacaac ctcgggcagt tgtaaagtaa
     2881 tgctttataa ctcagtaagg ttggttagac cctgacatac aaatttgaac gacttgccaa
     2941 aaagaggtgg caaggtttag gcaacacact cgcaaggtgt ggagagctga aaaggcaaca
     3001 ctggtatcag tcctaagcaa tcacgcttat ctcaagtttg agtaagtacg gatacaagca
     3061 gcacccgacg gaatggcgaa agccgggcgg gcgacggcgt gggcagacac gcatttattc
     3121 caaagctcat ttcaccaagt gtgtttcgga atacccacaa ctagacgcaa gtcgctccat
     3181 ttgcccaccg taaaacgtgg gcttttttta accctaaagg acaatcctat gaacaaaatg
     3241 aaacaacttg ccccatttgc cttgctaatt ttgctattag gcattgtcgg gcgaatggat
     3301 tatgacgacc acatacaaat gcaacgttac aaatgcgaac gaaatcaagg cttttggcaa
     3361 atggaaagca acggcaacca atactgcgga gggaaatatg gcacgaaaaa ttgatgccgg
     3421 tgttgagatt gttgaggtag ataaacgatt tatcgccaag tttttttatg acggcaaatt
     3481 acagcacaca acctatccac aatacaaccg ccaaaacgca attatgttga ttaaccgcaa
     3541 aattgagcgg ttcaacattg gcagagacaa accaatcaaa ctttataagg aataacaatg
     3601 gcaggaatta acaaagtgat tattgtcggt cgcctaggta acgacccgga actacgaaca
     3661 atgccaaatg gcgattcagt cgccaaaatc agtgtagcaa cttcaaccga atggacggat
     3721 aaaacctcag gcgagaaaaa acaagccaca gagtggcata gcattatcgc ctttcggaat
     3781 ttagctgaca ttatcggcaa atacctgaaa aaaggctcgc aagtgtatgt ggaaggcaag
     3841 ctacgcactc gcaaatggca agcccaagac ggcacagacc gctggacgac cgaaatcatc
     3901 gccgatcagc tacaaatgct cggtagctca aacagcggaa acagcaataa taattgggca
     3961 accgaaccgg caggaaaccc accaccaacc aatccatata accacgtaat gacggattca
     4021 gaatcacgag attttgatga tgatatccgg gttcgttgga ttaccaaaga acaagccaag
     4081 cagtttatta ataatattag tactgattgg atgaaaacta tctgctcttt tgctttatta
     4141 acaggagcaa ggcgaacaga aatactttct atgacttggg ataaaataga ttttatccgt
     4201 aaagtagcga ttgtttcgaa tgatattgcc aaatctgaaa aagcgagatc gcttttactt
     4261 aatgatgatg caattgaatt attacaaaag cagagaggga aaaatcctaa atatgttttt
     4321 gtaggaagca aagggcaggc attacaagat attaaccgca aaatatttaa caaagcgact
     4381 gaaaaatgtt tattggttga tttccatttc catgatttaa ggcatacttg ggccagttgg
     4441 cacgttcagg ccggcacacc attatttacc ttaaaagaat tgggtggctg ggaaacatta
     4501 gagatggtaa agaaatatgc ccatcttaat gcagaccatt tactcaacca cgctaactca
     4561 gttaaattct agtcacaaat tagtcacaaa gtatttttga cataggaaat taataactga
     4621 tatttaaatg taactatttg aaatataagg gtaattaatg gcacgcccta aaggattcga
     4681 acctttgacc cacgccttag aagggcgttg ctctatccag ctgagctaag ggcgcagatg
     4741 aagataatat aaaaagaagt ggtcggcgag ataggatttg aacctacgac ccactggtcc
     4801 caaaccagtt gcgctaccaa gctgcgctac tcgccgacat aagatgttgt tgattataga
     4861 tttctttgca caacagtcaa tctttttttg tgaatgtcgg cttaaatgat tgaagtttat
     4921 ccgttattca aaattagctt atcaaaaagg ctattttttg agagaatgac gaatgttttg
     4981 ccaagtgata tttcgggagg tagtaatgac tgcacaaatt atttcgggga gtgaggtttc
     5041 ttcacaaatt aaaaaaaagg tgagtgagaa aatcgctcat tatcttgaac agggtaaacg
     5101 taaccctggt cttgcggtca ttttagtggg gaatgaccca gcctctcaag tgtatgtggg
     5161 gagtaaacgc aaaagctgtg ccgaaattgg gattgcgtcg aaatcttatg atttacccga
     5221 agaaaccaca gaggctgaat tattagcact gattgaaaag ttgaatcaag atgattcggt
     5281 cgatgggatt ttagtccaat taccgttacc taaacagatc gattcgacta aagtgattga
     5341 agccatctta ccacataaag atgttgatgg attccaccct tataatgttg ggcgtttatc
     5401 tcagcgtatt cccactttac gcccttgcac gccatacggt gtgatgaagt tgcttgaaac
     5461 aactggggta gatttatatg gtcaacacgc agtgattgta ggtgcgtcta atattgttgg
     5521 tcgcccgatg gcgttagaat tgttgcttgg tggttgtaca gtcacagtta ctcatcgctt
     5581 taccaaagat ttagagcatc acgttcgcca agcagatatt ttagttgtgg cagtcggcaa
     5641 gcctgaattt attcccgggg agtgggttaa agacggtgct atcgtgattg atgtagggat
     5701 taaccgtgga gcagacggca aactaaaagg tgatgtagag tattcagttg cctcacaaaa
     5761 agcggcattt atcacccctg tccccggtgg ggtaggcccg atgacggtgg caatgttaat
     5821 gcaaaatacc ttgcagacgt atgaaaacca tttacaagcg gtctaatttt acggatattt
     5881 tgcaaatcct cggcattggt cgaggatttc tttttctggg ctttttcagc agaaaaggct
     5941 aaaatacttg ccatttttat tacacgatcc ttattaaata tgaaatttat catcaaactt
     6001 ttccctgaaa ttatgattaa aagcgactct gttcggaaac gctttatcaa aattttaacc
     6061 tcaaatattc gcaacgtatt attaaaagag actgaaaatg tgtctgtggt tcgccattgg
     6121 gactttattg aagttcgggc gaaagtggac gaagaaacgg cattagtgct ggatttgctt
     6181 aaacgcacgc cgggtattca ccatatttta gaagtggagg aaaccccttt tacggatatg
     6241 cacgatattt ttgagcagac ttatgccgca gtgaaagctg aactagaagg caaaacgttt
     6301 agcgtgcggg ttcgccgtaa aggaaagcac gatttccgtt ctcttgatgt agagcgttat
     6361 gtcggtggtg ggctgaatca gcggattgaa acggcgaaag tgaaattaac caacccagat
     6421 gttacggtca gaattgatat tgaacatgat aaaatgttgc tgattaaagc tcgccacgaa
     6481 gggttaggcg ggtatccaat cggcacacaa gaagatgtgt tgtcattgat ttcgggtggt
     6541 tttgattcgg gtgtatcgag ctatatgctg attcgcagag gttctcgtgt gcattactgt
     6601 tttttcaatt taggtggtgc cgcacacgaa attggcgtga aacagatggc atatcatatt
     6661 tggagccgtt atagtacctc gcacaaagtc cgttttatcg ccattaattt tgaaaatgta
     6721 gtgggtgaga ttttagaaaa agttgataac ggacaaatgg gcgtggtatt aaaacgtatg
     6781 atggtgcgag cggcaagccg tattgccgag cgttttgata ttcaagcgat tgtgaccggt
     6841 gaggcgttgg ggcaggtctc tagccaaaca ctgactaatt tacgtttaat tgataaggca
     6901 tcagatacgc tggtattacg tccgctcatc actcacgata aagagcagat tattgcaatg
     6961 gcaaaagcga taggcactga cgatattgct aaatcaatgc cggagttctg tggagtaatt
     7021 tctaaaaatc cgacggttaa ggcaatcgaa actaaaattt tggaagaaga aggcaacttt
     7081 aattttgagg tactagaaca agcggttcaa acggcgagtt atttagatat tcgtgagatc
     7141 gctcagcaaa ccgaaaaaga ggttgtttcg gttgaaacca caacagaatt gagtaaaaac
     7201 gatgttgtgc tagatattcg cagcccggaa gaggttgatg aaaaaccatt ccgtttagac
     7261 ggggttgaag taaaagaact cccgttttat aaactttcca gccagtttag tacgcttgac
     7321 caaagcaaaa cctacttgct ctattgccaa cgtggggtaa tgagtaaact gcaggctctt
     7381 tatttgaaag agaatggcta cagcaatgta aaagtgtttc gagtgaaata atgcctcttt
     7441 gattgcacct taatgattga ttaaggtgca attttttacc aaataaggct tgctaaaaag
     7501 agtaagatca caggaaattc aagcattcca acttgtttaa cattccagcc aaagcttggc
     7561 acaataatgg ctcgggcagt tgcaattaaa taagcaaaaa agaccgcttg tagagagcag
     7621 agtatgtaaa gcattgctaa aaccaaatgt attgcaatac tgatttccat ataaattggg
     7681 tttcttcgct ctcgcaccat actctttata tagaaagtcg tagcaataaa aaatagggta
     7741 gggtggagca gaatctcaaa ctgatattgt ttcgttacca gataataagc tgccattccc
     7801 attatgccaa aggttagaat gccggcaata tcattccata aattgcgttc atctttttgt
     7861 ttggcgtagt gaacttgcac taacccaagc ggtagaatta tcggtaaaaa ttgcaaaatc
     7921 gaaggctgag cgtagatcaa aggtaatgca aatagaatgc ttaagccaaa gtagattttc
     7981 gcccattttt tattgcgttc agttggcttt ttactgaaaa gtgagagaaa agggtaggaa
     8041 aagaagtaga gaaacagcca cgacagccca aagaaaatat gcaaagtgct aaaaccactt
     8101 tcaataacgg cgtagagaaa cggcaacatt gccattgcta atgcaccgtg ttggttggat
     8161 ataacgggtt tttctttgaa cattcaattt ccctcttaat gtggcaaata aaaaggcgac
     8221 taaacagccg cctttaaatt gtaagaaaag ttagaataat tttctagagg cttcaaataa
     8281 ttcttctttg aacggacgac gcatattatt gatcgcatca ataatatcgt ggtgaaccaa
     8341 ctgctcgttt tgaataccga cacagtgacc gccaaagcct tgcagtaata attccaccgc
     8401 atagacgccc atacgggagg ccaaaatacg gtcgaaggca caaggcgaac caccacgttg
     8461 aatatgacct aatacggttg cacgggtttc attgccgaaa cgtgcttcaa tttctttcgc
     8521 taatgcgtga acatcggtca tcaattctgt aattgcaata attgaatggc gtttaccttt
     8581 gtggaaacct tcttcaatgc ttcgcattaa tgcatcttta tctaagcctt tttccggtac
     8641 gatcacatat tcgcaaccac cggcgagggc agcacttagg gttaaatcac cacagtggcg
     8701 acccataatt tccacaatcg aaatacgttg gtgtgaactt gaagtatcac gcaggcggtc
     8761 aatcgcatct aatgcggttt caagggcagt ttgatagccg atggtgtaat ccgttcccac
     8821 aatatcgtta tcaatcgtac ccggaatacc gatacaaggg taaccaaatt cttcggttaa
     8881 taatttagcc cccatataag aaccgtcgcc accaataacc actaatgcat caatgctgta
     8941 tttttttaag gtttcgacac aatgtttgcg aacttctggt cttttaaaat cagggaagcg
     9001 ggcagaacct aagaatgtac cgcctcggtt gatggtttca gacacggaac ggcggtcaag
     9061 tgggatcact ttatcgtggt aaagcccata gtagccgtct tgaataccac aaacctctaa
     9121 accttcatta agtgcggtac gaaccacacc acggattgcc gcgttcattc ctggtgcatc
     9181 accaccactg gttaatactg caattttttt gattttttta ctcatttaaa aacaccttgt
     9241 tgataaatta aagttaaatt ggaaactggt gcaaggttac aatattcagc cttttcgttc
     9301 tactaaaaaa tacgtatttt tttgatttag cttagctttc ttgcaaaatt tcaagggtaa
     9361 aatctagagc gttgaaaaaa tgctcaacat cttgttgatt attgtaatgg gcaagtgaaa
     9421 gtcgaactgt tccgacctct tctaaatggc gtaaataagg cttggcacaa tgctcccctt
     9481 ggcggatcgc aattttactt tgggttaaga aagcggcaat atcggcaggg tgctgatttt
     9541 tcaccacaaa gctaatagtc ggtgtatttt gttgcccgat aatttgcaaa ttttgataag
     9601 aatttaaccg cttgcaggtg tattcagcca agtcataaag ctgatgatta agagcgacaa
     9661 aatcccattt ttcgagccaa gctagcactt gcccaaagcc gataatgccg gcgatattcg
     9721 gcgtgccagc ttccaagcga taaggtaact ctgccacagt taattcactt tccgtaatgt
     9781 ttttcagcat tttgccgcca aatacaagcg gttgaatttg ctccaaactt tgcaatttgc
     9841 cggtaagcac gcccacaccg tttggaccat acattttatg ggcggaaaaa gcgtagaaat
     9901 ctgcatctaa tttctgaacg tccacttgct ctgagcaaac tgcttgagca atatctaaca
     9961 caattttagc agagcaagat tggcggataa gcgggattat ttgttccgct ggctggcgaa
    10021 ctcctgttac gttagaaact aaattaaagg caacaatttt ggttttttcc gataacgcat
    10081 ttttaagggt ttcaagctca atttcatact tatcattaag tggcaacacc acgagtttcg
    10141 cccttgtacg ctgtgccaac tgctgccaag gaataaaatt agcgtgatgt tccgccactg
    10201 aaattacaat ttcatcgcct gctgcaattt gatgctccaa gccataagcc acggtgttaa
    10261 tactttgggt tgtaccgctt gtccaaatca ccgcttcacg agtttccaca ttgaaacgtt
    10321 ttgcgactaa atctcgagct aattcatatt gttcggtttg tggcaaatcg tactgactgc
    10381 gatgcaccga ccccgcagaa gcgtaaaact cacttgttgc ttcaatgagt acatcaggtt
    10441 tcagcgttgt agcggcagaa tctaaatacg tccatccgtc agatttttca aaaaaaggga
    10501 aatgggtgcg aaattgggtg ttaagcataa gttaattcct aagagttgtg gaaaattgag
    10561 ttaccaagaa aatacctatt ataaag
//
LOCUS       DANLTI010000095        10565 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.095, whole genome shotgun sequence.
ACCESSION   DANLTI010000095 DANLTI010000000
VERSION     DANLTI010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10565
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.095"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            15..242
                     /locus_tag="PXB09_001939"
     CDS             15..242
                     /locus_tag="PXB09_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL5234022.1"
                     /translation="MILEIINALGNKENIKQVEACLTRLRVVLHNNGLLNKSALKKLG
                     AVDVIKVGDTQQIIFGAKAGQYRDEINALIG"
     gene            complement(286..1110)
                     /locus_tag="PXB09_001940"
     CDS             complement(286..1110)
                     /locus_tag="PXB09_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5234023.1"
                     /translation="MNGPTQLAHFQEQIRKEYDGLSKRLKQVAQYVLDNGNSVVFDTV
                     STIAERADVPPSTLIRFANAFGFSGFNEIKQLYRQDMMEGTSRYTERVQLFRQIEPLD
                     EQNSELNHILDVFVQGNTQALQQLSTQVSEEQLAQTVDILHNAKRIFIVGLKRSFSIA
                     NYLNYALHHLDYDVFMIDGSGGMFDEQLSRIREGDAVIAVSFSPYANETLNVVTATAR
                     PGVKHIAITDSQLSPLLSFSDVSFIIKEAQVSGFRSQCATMTLAQTIAVSLALKKA"
     gene            complement(1248..2588)
                     /locus_tag="PXB09_001941"
     CDS             complement(1248..2588)
                     /locus_tag="PXB09_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5234024.1"
                     /translation="MSVSQRFIDFMNAHVAPVARRMENQPHISAIRDGFIVVLPFLIV
                     GSFIMILLIPPFDENTQNAFGQAWWRFANWASPYGWNFFQMSFNAISLFTSASIAYNL
                     AKAYKREPLPAAFLSVMAFLLVAAPVKDGMMDIKFFGGIGLFSAIFIAIYSVEMTRLL
                     EFLKIKIRLPKEVPHAVAESLNIVIPILAILLTLYPFAIWVESATGRNIPQLIMDFMA
                     PLIAVSDSLGAICLFVIATHLLWFLGINGSLVLMQLWTPFLLQNMAANLAAFQAGEPL
                     PFIITNSFWDFYIVHGASGGVIALAFLLVRSKSAHLRSIGKIGLVPSFFSIGEPIVYG
                     VPMVVNPLFFIPLIFAPLANAVIAYLILDFNLIHRVYLMAPWTTPAPIGAYLVSAGDI
                     WAPILSIALIILDIVIYYPFFKMYEKVCVEKEKAQNLDEKAQQELLEKARMAAQ"
     gene            complement(2591..3937)
                     /locus_tag="PXB09_001942"
     CDS             complement(2591..3937)
                     /locus_tag="PXB09_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HDL5234025.1"
                     /translation="MSCNTSPKRFHASWESIKQHQVPEWYEDAKFGIFIHWGIYSVPA
                     FAPPTCQLGEIDIDIDEQWFCNNPYAEWYFNSINVKKGPTYEHHIKTYGESFAYNDFL
                     PLWKAEKWQPAEWAKLFAKAGAKYVVLTTKHHDGFCLYPSKYTDFNCMQAGPKRDLMG
                     ELTENVREQGLKMGAYYSGIIDWTYSSAPIFTESQNFSNACPTYEYADYAYKQVVELI
                     DRYKPDVLWNDIGWPKVGEHMLPHLFAHYYNSVQEGVVDDRWNKLWCDFTSKEYKHGV
                     ASRDKKWEMCRGMGLSFGYNQVEDESHLISVKDLISLLVETVADNGNLLLNIGPKADG
                     TIPQEQVERLLALGSWLEINGEGIYKSRCSQHQTEQIGDVTYRYTKVGADLYLYIDGL
                     TEAQISLPLSVYGELQALNTELKFTIENTAQGRVLHIQNYQPDWYVLGFKIADGEK"
     gene            complement(4226..6142)
                     /gene="iolC"
                     /locus_tag="PXB09_001943"
     CDS             complement(4226..6142)
                     /gene="iolC"
                     /locus_tag="PXB09_001943"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HDL5234026.1"
                     /translation="MATVNHQDRPLDLICLGRVAVDFYGQQIGSRLEEMTTFSKYLGG
                     SSGNVAYGTAVQGLRSSMLARVGDEHMGRFLREELQSVGVDTSHLITDKERLTALVIL
                     GIKDKETFPLIFYRDNCADMAITKDDFSEAYIASSRCLAITGTHLSNPKTREAVLTAL
                     EYAGRNEVKRALDIDYRPVLWGLTSLGDGETRYIDSAEVTKSLQEVLHHFDLIVGTEE
                     EFHIAGGSTDTLTALKNVRKVSNAVLVCKRGALGCSVFEGELPNDLDGGLNVYGVRVE
                     VLNVLGAGDAFMSGLLRGYLNNEGWEQACHYANACGALVVSRHGCSPAMPTKRELDDY
                     LTRAESVPRPDLDERLNHLHRVTTRKKQWENLCIFAFDHRKQLVDMANKVGADLARIP
                     KLKQLLLKAMEQTATQSGLPQNQAGILADTTFGQDVLNEITGKDYWIARPIEEPSSRP
                     LELEYGDLGSQLASFPRDHVIKCLAFYHPNDESGLKARQDRKLKEVYQACCRTGHELL
                     LEIILPADMPQSEAFYNQAIAHFYQLGIKPEWWKLPDVSRAQWQAISATIEANDPDCR
                     GILILGLDAPLEVFKDTFEQAKGCEKVKGFAVGRTIFGEPSEKWLAGELDDNTLISAV
                     SEKYRTLIDLWQQR"
     gene            6410..8344
                     /gene="iolD"
                     /locus_tag="PXB09_001944"
     CDS             6410..8344
                     /gene="iolD"
                     /locus_tag="PXB09_001944"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HDL5234027.1"
                     /translation="MQTTRLTVAQALVQFLDNQYLDVDGKEIKFVHGVAAIFGHGNVL
                     GIGQALAQNAGGLTLYQGRNEQGMAHLAMGFAKQNLRQRIIACTSSVGPGAANMVTAA
                     ATATANRIPLLLLPGDVFATRQPDPVLQQIEQPYDLSISTNDAFRAVSKYWDRVQRPE
                     QLMSACINAFRVLTDPAETGAVTIALPQDVQAESFDFPNSFLQKRVHRLERTPPTTAM
                     IKQAVTLIQTKKKPLIVCGGGVRYSQAGQILQKFAKQFGIPFAETQAGKSAVVSDHAL
                     NVGGVGETGCLAANRLAKEADLVIGIGTRYTDFTTSSKWIFQNPNVQFLNINVARFDA
                     YKLDGVQLVADAKTALEALSQAIPTDYQAQWENEISQAKADFADEIQRLRAVQYHPDF
                     TPEINDNLDHKAVHNEFIQLTGSQLTQTQVLGIVNETIDNNAIIVAAAGSLPGDLQRT
                     WLSKGEETYHLEYGYSCMGYEVSAAVGVKIARPEQEVYALLGDGSYLMAHTELVTSIQ
                     EGKKINVVLFDNMANGCINNLQIGNGMDSFGTEFRFRNGETNQLNGGLVPIDFAKNAE
                     AYGCKTYRVTNEAELRAALDDAKKQTVSTLIDIKVLPKTMAHGYGCWWHVGVAEVSES
                     ERIQQARQRSEEQLAKARKY"
     gene            8471..9367
                     /gene="iolE"
                     /locus_tag="PXB09_001945"
     CDS             8471..9367
                     /gene="iolE"
                     /locus_tag="PXB09_001945"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011817366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HDL5234028.1"
                     /translation="MKAENIQLGIAPIGWTNDDLPELGAENTFEQCVSEMALAGYTGC
                     EVGNKYPRDVAVLKHKLDVRGIQICNAWFSTFFVDGKREETIAEFIKHRDFLHAMGAK
                     VIGCSEQSRSIQGTTKSVFKEKPIFNDEDWKRMAEGYNELAKLAAEKGMKVCLHHHMG
                     TGIQTPEEVDRYMAEVNDDVYLLFDSGHLYYSEGCQKAMLGVLEKYIDRIIHVHLKDV
                     RDEVMAEVKAKDLSFLEGVKKGTFTVPGDGVIDFRPIFDILEKHDYKGWMVVEAEQDP
                     ALANPFEYALKGRKYIRETAGV"
     gene            9369..10379
                     /gene="iolG"
                     /locus_tag="PXB09_001946"
     CDS             9369..10379
                     /gene="iolG"
                     /locus_tag="PXB09_001946"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HDL5234029.1"
                     /translation="MLKVGIIGAGRIGRVHSESISKYVKGAEIKAISDVKITEELTAW
                     AKSMGIPEVYDDYKKILQDPEIDAVLVCSSTNTHAPISIEAAQAGKHVFCEKPVDADP
                     AKIREVLSAVEKAGVKFQVGFNRRFDHNFKAIKDRVAAGDIGEPHVIRVTSRDPEAPP
                     IEYVKVSGGMFFDMTIHDFDMIRYLSGSEVEEVFAVGTVLVNPEIGKAGDIDTAVITL
                     KLKNGAIGVIDNSRKAAYGYDQRAEVFGSKGAIHITNDTGSTAVFSGENGVVAEKPKY
                     FFLERYMQSFADEISCFVDSVVNDKPTLVNGNDGLQPVLIALAAKKSLEENRPVKLSE
                     VA"
BASE COUNT         3022 a         2326 c         2362 g         2855 t
ORIGIN      
        1 tgtctgataa atctatcatt ctagaaatta ttaatgcttt aggaaacaaa gagaatatca
       61 agcaagttga agcttgttta acccgtttac gtgtggtgtt acataacaac ggtttattaa
      121 ataagtcggc actgaaaaag cttggggcgg ttgatgtcat taaagtcggt gatacgcaac
      181 aaattatttt tggtgcaaaa gccgggcagt atcgtgatga aattaacgct ttaatcggtt
      241 aatagacaaa gacctgtatt tacgcaggtc tttcactttc ttaatctagg cttttttcaa
      301 cgccagtgaa acggcaatcg tttgtgcgag cgtcattgtg gcacactggg atcgaaaacc
      361 actcacctgt gcttctttaa taataaacga cacatcgcta aatgaaagga gtgggctaag
      421 ttggctatca gtgatcgcaa tatgttttac ccccggtctg gcagttgctg tcaccacgtt
      481 gagtgtttca ttcgcatacg gggaaaagct cacggcaatc accgcatcac cttcacggat
      541 tcggcttaat tgctcgtcaa acataccgcc cgaaccatcg atcataaaga catcatagtc
      601 caaatggtgc aacgcatagt ttaggtagtt cgcaatgctg aatgagcgtt ttaaacccac
      661 aataaaaatg cgtttggcat tgtgtaaaat atctaccgtt tgtgctaact gctcttcgct
      721 gacttgtgtc gataactgtt gcagtgcctg cgtattaccc tgtacgaaca catctaaaat
      781 atgattgagc tcactgtttt gctcatcaag cggttcaatt tgacgaaaaa gttgcacacg
      841 ttcggtgtaa cgtgatgtgc cttccatcat atcttggcga taaagctgtt taatttcatt
      901 aaaaccgcta aatccaaacg cattcgcaaa acggattaag gttgaagggg gaacatcagc
      961 tcgttcagca atggtagaaa ccgtatcaaa caccacgctg ttgccattat ccagcacata
     1021 ctgtgccact tgttttaaac gtttacttag tccgtcatac tcttttcgga tttgttcttg
     1081 aaaatgtgct aattgagtag gtccattcat ttcaaattat ctctgcttga attttttatt
     1141 tcattatacg cttttcttgt ttacaagcgg ataaattttg tcaatttttt gcaaaaataa
     1201 gggctaatct ttcgattagc ccctctcaat tacgctagaa ataagtgtta ttgtgctgcc
     1261 attcgtgctt tttctagcaa ctcctgttgt gctttttcat ctagattttg tgctttttct
     1321 ttctcgacgc agactttttc atacattttg aagaatggat agtagatcac aatatccaaa
     1381 ataatcagtg caatacttaa aattggtgcc caaatatcac cggcagaaac cagatatgcc
     1441 ccaatcggtg ccggtgttgt ccacggtgcc atcaagtaaa cacggtgaat aaggttaaaa
     1501 tctaaaatca ggtaggcaat aaccgcattc gctagtggtg cgaaaatcag cgggataaag
     1561 aacagcggat taaccaccat tggcacacca tacacaattg gttcaccgat agagaagaag
     1621 gacggaacca agccgatttt accgatagag cgtaagtgtg ccgatttact gcgtaccagc
     1681 aggaatgcca aggctattac accaccactt gccccgtgta cgatatagaa atcccagaag
     1741 gaattggtga tgataaaggg gagcggttca ccagcttgga atgctgctaa gtttgccgcc
     1801 atattttgca gtaggaatgg tgtccaaagt tgcattagta ccaatgagcc gttaatgcct
     1861 aagaaccaga gcaaatgggt agcaataacg aacaagcaaa ttgcccctag cgagtcactc
     1921 acagcaatca atggcgccat aaagtccata attagttgtg gaatattacg acctgtggca
     1981 ctttccaccc aaatggcaaa cggatagaga gtcagtaaaa tcgctaaaat tggaatcacg
     2041 atattcagag attctgctac agcgtgcggc acttctttcg gtaagcggat tttaattttt
     2101 aagaactcca acaagcgggt catttctacc gaataaatgg caataaaaat cgcagagaat
     2161 agcccaatac cgccaaagaa tttaatatcc atcattccgt ctttgaccgg tgcagccact
     2221 aacaaaaatg ccattaccga gagaaatgcc gctggcaggg gctctctttt ataggctttg
     2281 gcaaggttgt aggcgatact ggcagaggta aataatgaaa tcgcattaaa cgacatttgg
     2341 aagaaattcc aaccgtaagg gcttgcccaa ttcgcaaaac gccaccaagc ttgcccgaaa
     2401 gcattttggg tattttcatc aaatggcgga attagcaaaa tcataataaa gctgccgaca
     2461 attaagaatg gtaacactac aataaaaccg tctcgaatag cggaaatatg cggttgattt
     2521 tccattcgac gtgctactgg agcaacgtgg gcattcataa agtcaataaa acgttgtgaa
     2581 acggacatac ctatttctcc ccatctgcaa ttttaaagcc taatacatac caatccggct
     2641 ggtagttttg aatatgtaac actctgcctt gtgcggtgtt ttcaatggta aatttcagct
     2701 cggtattgag tgcttgtagc tcaccataaa ctgacagtgg caagctgatt tgggcttcgg
     2761 ttaagccatc aatgtaaaga tagagatccg ccccaacttt ggtataacga taggttacat
     2821 caccgatttg ctcggtttgg tgttggctac aacgggattt atagattccc tctccattta
     2881 tttccagcca gctccccagt gctaataagc gttcaacttg ctcttgcgga atagtgccat
     2941 ctgctttcgg gccgatattc agcaataaat tgccgttgtc ggctacggtt tctaccaata
     3001 gggaaatcaa gtctttcacc gaaatcaaat ggctttcgtc ttctacctgg ttatagccga
     3061 acgataagcc cataccacgg cacatttccc atttcttatc acgggaagcc acgccgtgtt
     3121 tgtattcttt ggaggtgaaa tcgcaccata gtttgttcca gcggtcgtcc actacgccct
     3181 cttgaacgct gttgtaataa tgagcaaata ggtgtggtaa catatgctcg cccacttttg
     3241 gccagccaat atcattccac aatacatctg gtttatagcg gtcgatcagc tctaccactt
     3301 gtttataggc gtagtcagcg tattcgtaag tcgggcaagc gtttgagaag ttttgacttt
     3361 cggtgaaaat cggggcagag gaataagtcc aatcgataat gcccgagtag taagcgccca
     3421 tttttaagcc ttgctcccgc acattttcag tcagctcgcc cattaaatcc cgcttcggtc
     3481 cggcttgcat acagttgaaa tcggtatatt tacttggata gagacagaaa ccatcgtgat
     3541 gtttggtggt taataccaca tatttggcgc cagctttggc aaacagtttc gcccattctg
     3601 ctggttgcca tttttccgct ttccatagtg gcaggaagtc gttataggca aaggattcgc
     3661 cataagtttt gatatgatgt tcgtaggtcg ggcctttttt gacattgatg gaattaaaat
     3721 accattctgc ataagggtta ttacagaacc actgttcatc aatatcaata tcaatttcac
     3781 ctaactgaca ggtcggtggg gcaaaggcgg gtacggagta aatcccccag tgaataaaaa
     3841 tcccaaactt agcatcttca taccactctg gtacttggtg ctgtttgatc gactcccaac
     3901 tggcgtggaa acgttttggt gaagtgttgc aactcataca cagactccta ttgaatctaa
     3961 atagaactaa actgaaatac attttccatt ttgataaaaa taaaacaatt tgtttcgata
     4021 aaaagggggg ggtttatgta tgaaatgtga acttcatcac acttattttg tgataagcag
     4081 attgaggaat gcccgatatt cgctttttta ggaaaattcg ggcattttta cggctagcaa
     4141 gcggtctgtt tagccggatt ttttgcaaaa caaaacccct tgcttaatat cataagctaa
     4201 ggggttttca cttaaagcaa tatgattaac gttgttgcca gagatcgatt aaagtgcgat
     4261 atttctccga taccgcagaa atcaaggtat tgtcgtccaa ttcaccggca agccattttt
     4321 cggacggttc accgaaaatg gtgcggccga ctgcaaagcc tttcactttc tcacagcctt
     4381 ttgcctgttc aaaggtgtct ttaaacacct ctaacggggc atctaaacct aaaattaaaa
     4441 taccacgaca gtccggatcg tttgcctcaa tggtggcgga aatcgcttgc cattgtgcgc
     4501 gagaaacatc cggcaatttc caccattccg gcttaatgcc aagttggtag aaatgtgcta
     4561 tcgcttggtt atagaaagcc tcactctgtg gcatatcagc aggcagaata atttccaaca
     4621 atagctcgtg accggtacgg caacaggctt gatacacctc ttttaacttg cgatcttggc
     4681 gggcttttaa accgctttca tcattcgggt ggtaaaatgc caagcatttg atgacgtgat
     4741 cgcgtgggaa tgatgctagc tgagagccta aatctccata ctctaattcc agcgggcggg
     4801 aagacggctc ttcaatcggg cgggcaatcc agtaatcttt gccggtaatc tcattaagta
     4861 catcttgccc gaaagtggta tcggctagga tccctgcttg attttgtggt aagccggatt
     4921 gagttgcggt ttgttccatc gcttttaata gcagctgttt cagtttcggt atgcgagcaa
     4981 gatctgcacc gactttattt gccatatcca ccaactgttt gcggtgatca aaagcaaaaa
     5041 tacagagatt ttcccactgt tttttgcggg tggtgacacg gtgtaagtgg tttaaacgct
     5101 catctaaatc cggacgtggt acactctctg cacgggttaa ataatcgtca agttcacgtt
     5161 tggtcggcat tgccggtgaa cagccgtgac gagataccac taacgctccg cacgcattgg
     5221 catagtggca cgcttgttcc caaccttcgt tatttaagta gccacgcagt aagcccgaca
     5281 taaaagcatc gcctgcaccc agcacattca gcacttctac acgcacgccg tacacattca
     5341 agccaccgtc taaatcattc ggcagctcgc cttcaaatac tgaacaccct aatgccccac
     5401 gtttgcacac taatacggca ttagagactt tacgcacatt tttgagtgca gtgagagtat
     5461 cggtcgaacc gcctgcgata tgaaattctt cctctgtgcc gacaatcaga tcgaaatggt
     5521 gcaatacttc ttgtagcgat ttggtgactt cggcactgtc tatataacgg gtttcgccat
     5581 caccgagtga ggttaatccc cataacacag ggcgataatc aatatctaac gctcgtttta
     5641 cctcatttct acccgcatat tcgagtgcgg tcagcacagc ttcacgggtt ttagggtttg
     5701 acaggtgcgt gccggtaatt gctaagcaac ggctggaagc aatataggct tcgctaaaat
     5761 cgtctttggt gattgccata tccgcacagt tatcacgata gaaaatcagc ggaaaagtct
     5821 ctttatcttt aatgccgaga ataaccagtg cagttaagcg ttctttatcg gtaattaaat
     5881 ggctggtgtc cacgcctacg ctttgtagct cttcacgtag aaaacgcccc atatgttcgt
     5941 caccgaccct tgccagcatt gaagaacgta aaccttgcac cgccgtaccg taagccacat
     6001 tgcctgacga gccgccgagg tattttgaaa atgtggtcat ctcttccaaa cgggaaccga
     6061 tttgttgccc ataaaagtcc accgccacac gccctaaaca gataagatcc aatggacgat
     6121 cttgatgatt aactgttgcc ataaccgctc cttacaacaa gtaaatttga atacacacta
     6181 tacatcatac aaaaatgaaa tttttatttc aaatttattc tatttaaatt atcatttctg
     6241 tgatctagct ctcactttga aaaataaggc aataacttcg cagaaatgag aactggatca
     6301 catctttttt tcgatttcct tgctattata aatgaaataa atttttcatt tgtaaaaatc
     6361 agtagaaaac cgaccgcttg caaaagcgat gtaagccaga ggaggcttta tgcagactac
     6421 tcgtttaacg gttgcacagg cgttagtgca atttttggat aatcaatatt tagacgtgga
     6481 cggcaaagag attaaattcg ttcacggtgt tgccgctatt ttcggccacg gcaatgtgct
     6541 gggaataggt caggcgcttg ctcaaaatgc cggtggttta acgctctacc aaggcagaaa
     6601 tgagcaaggt atggcacatt tggcgatggg ctttgctaag caaaatctgc gtcaaagaat
     6661 tattgcctgt acttcctcgg tcgggccggg ggcggcaaat atggttacgg ctgcggcaac
     6721 ggcaacagcg aaccgtattc ctcttctttt attaccgggc gatgtgtttg cgacccgcca
     6781 gccggatccg gtactgcaac aaatcgaaca accttacgat ttaagcatta gcactaacga
     6841 tgcgttccgt gccgtcagta aatattggga tagagtgcaa cgccctgagc agttaatgag
     6901 tgcttgtatc aatgcgtttc gtgtgctgac cgaccctgct gaaaccggtg ctgtcaccat
     6961 tgctctgccg caagatgtac aagcggagag ttttgatttc ccgaacagct tcctgcaaaa
     7021 acgagtgcat cgcttagagc gtacaccgcc gacaacagcg atgattaagc aagcggtaac
     7081 attaattcaa accaagaaaa aaccgctgat tgtctgcggt ggcggtgttc gctactcgca
     7141 agcgggtcaa attctgcaaa aatttgctaa acagttcggc attccatttg ctgaaaccca
     7201 agcgggtaaa agtgcggtgg tgtccgatca cgcattgaat gtaggcggag tgggagaaac
     7261 cggttgttta gcggcaaacc gtctggcaaa agaagcggat ttagtgattg gcattggtac
     7321 acgctacacc gacttcacga cttcttccaa atggattttc caaaacccaa acgtgcagtt
     7381 tttgaacatt aatgtggcac gttttgatgc gtacaaatta gacggcgtgc aactggttgc
     7441 cgatgcaaaa actgcattag aggcgttaag ccaagccatt cctactgatt atcaagctca
     7501 atgggagaat gaaatttcac aggcgaaagc ggattttgct gatgaaattc aacgcctgcg
     7561 cgctgtgcaa tatcaccctg atttcacccc tgaaattaac gataatcttg atcataaagc
     7621 ggttcacaat gaatttattc agctcaccgg ttcccagctc acccaaaccc aagtgctggg
     7681 tattgtgaat gaaaccattg ataacaatgc gattattgtt gccgccgccg gaagtttgcc
     7741 gggtgattta caacgcactt ggttaagtaa aggtgaagag acttaccacc ttgaatatgg
     7801 ctactcctgt atgggctatg aagtgagtgc ggcagtcggc gtgaaaattg cccgccccga
     7861 acaagaggtc tatgccttgc tgggggacgg ctcttactta atggcacaca ccgaattagt
     7921 gacctcaatt caagagggca aaaaaatcaa cgtggtgctg ttcgacaata tggcaaacgg
     7981 ctgtatcaac aacctgcaaa tcggcaacgg tatggacagt ttcggtacgg aattccgctt
     8041 ccgcaatggc gaaactaacc aactcaacgg cggtttagtg ccgattgatt ttgccaaaaa
     8101 cgccgaagca tacggctgca aaacctatcg ggtaactaac gaagccgaat tgcgtgccgc
     8161 ccttgatgat gcgaaaaaac agaccgtttc taccttaatc gatattaaag tgttgccgaa
     8221 aacaatggct cacggctatg gctgctggtg gcacgttggt gtcgcggaag tgtcagagag
     8281 cgagcgtatt caacaagccc gccaacgctc cgaagagcag ttagctaagg ctcggaagta
     8341 ttagttaaaa aaacaactcc ccactttgag ctacgagggg agaatatcaa gcggtcaaat
     8401 ttgcaaaatt tttgataaaa ataaccgctt gcatccaaat ttatctctat aaatcaaacg
     8461 aggtttctct atgaaagctg aaaacattca attaggcatt gccccaatcg gttggacgaa
     8521 cgatgacctg ccggaactgg gagcggaaaa cactttcgag cagtgtgtga gtgagatggc
     8581 acttgccggc tacacgggct gtgaagtggg taataaatat ccgcgtgatg ttgccgtgtt
     8641 aaaacacaaa ctggacgtgc gtggcattca aatctgtaat gcgtggttca gcaccttctt
     8701 tgtggacggt aaacgggaag agaccattgc cgagttcatc aaacatcgtg atttcttgca
     8761 tgcaatgggg gcaaaagtga tcggctgttc cgaacagagc cgtagtattc aaggcacaac
     8821 caaatctgtg ttcaaagaaa aaccgatttt caacgatgaa gattggaaac gtatggcaga
     8881 aggctataac gaattggcga aacttgccgc cgaaaaagga atgaaagtct gcctgcatca
     8941 ccatatggga accggtattc aaacacccga agaggtcgat cgctatatgg cagaagtgaa
     9001 tgacgatgtc tatctgttgt tcgattcagg gcatttgtac tattccgaag gctgccaaaa
     9061 agcgatgctc ggcgtactgg aaaaatatat cgaccgtatt atccacgttc acttaaaaga
     9121 tgtgcgtgat gaagtcatgg cggaagtaaa agcaaaagat ttaagctttt tagaaggcgt
     9181 gaaaaaaggc acctttactg taccgggcga tggtgtcatt gatttccgtc cgattttcga
     9241 tattttagaa aaacacgact acaaaggctg gatggttgta gaagccgaac aagatccggc
     9301 acttgccaac ccgtttgaat acgccctcaa aggcagaaaa tatatccgtg aaaccgcagg
     9361 agtttaatat gttaaaagta ggtattattg gtgcaggccg tattggacgt gtgcattctg
     9421 aaagtattag caaatatgtc aaaggtgctg aaatcaaagc aatctctgat gtaaaaatta
     9481 ccgaagaatt gaccgcttgg gcaaaatcga tgggtattcc ggaagtttat gatgactata
     9541 aaaaaatcct gcaagatccg gaaattgatg ctgtattggt ctgctcttcc accaacactc
     9601 acgctccgat ttcgattgag gcagcacagg ctggcaaaca cgttttctgt gaaaaaccgg
     9661 tagatgcaga cccagctaaa atccgtgaag tattgagtgc agtcgaaaaa gccggtgtaa
     9721 aattccaagt gggctttaac cgccgcttcg accacaactt caaggcgatt aaagaccgtg
     9781 tggcggcagg cgacatcggc gaaccgcacg ttatccgagt aacctctcgt gatccggaag
     9841 ccccgccaat cgaatatgtg aaagtctccg gcggaatgtt ctttgatatg accattcacg
     9901 acttcgatat gattcgttat ttatccggca gcgaagtgga agaagtgttt gcagtcggca
     9961 ccgtattagt aaaccctgaa atcggcaaag cgggcgatat tgatactgcc gttatcacgt
    10021 tgaaactgaa aaacggagca atcggcgtaa tcgacaacag tcgcaaagct gcctacggct
    10081 acgaccaacg tgcggaagtg ttcggctcga aaggggcaat ccatatcact aatgataccg
    10141 gctcaactgc cgtattctca ggtgaaaacg gcgtggtggc ggaaaaacca aaatacttct
    10201 tcttagaacg ttatatgcaa tctttcgccg atgaaatcag ctgtttcgta gattctgtgg
    10261 taaacgacaa accaacgtta gtaaacggca atgacggctt acaaccggta cttattgcct
    10321 tagctgcgaa aaaatcactg gaagaaaacc gaccagtgaa attgagtgaa gtggcgtaat
    10381 tgatcataaa tacaagcggt cggttttact cgctacactc gcacttcgtg ccatcggcat
    10441 agccgatgtt caaacgcaag cattttgcag aaaaatttgt aaaactgacc gtttgagttt
    10501 ttatttatta tcttttggga aataaatata atcgtgctca atttttattg attgtttaaa
    10561 taaat
//
LOCUS       DANLTI010000096        10284 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.096, whole genome shotgun sequence.
ACCESSION   DANLTI010000096 DANLTI010000000
VERSION     DANLTI010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10284
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.096"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            184..561
                     /locus_tag="PXB09_001947"
     CDS             184..561
                     /locus_tag="PXB09_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDL5234030.1"
                     /translation="MEYQFTHSIHGVVAKCSMDHEAFARWLNAEITENPSQLAPIFAE
                     IEKCRAAFPNHYECVFEGREYSLYFDYDEVMAKANNLDAAFDDEEMEEGFQFYNEESI
                     AFCGLDDFEKFLKAYQHFVQTYH"
     gene            650..1237
                     /gene="yihI"
                     /locus_tag="PXB09_001948"
     CDS             650..1237
                     /gene="yihI"
                     /locus_tag="PXB09_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDL5234031.1"
                     /translation="MSRTKKTRRITDIMPARKTDKPKQPMPKLGGGKNRKLTRYELDA
                     QAREEKRKRKHKGLPTGSRNADPAEQKKAVVKEVKDPRIGSRKKVPLMVEFVNQPEKG
                     RTIKAVPVEPIKPTLSPEQELEQLENNECLNQLLDDLEAGKTLSAEDQKFMNECLDRI
                     DELMTELGIEYEDEEGDNGDALLRQFETMDINKFR"
     gene            1251..1718
                     /locus_tag="PXB09_001949"
     CDS             1251..1718
                     /locus_tag="PXB09_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HDL5234032.1"
                     /translation="MLRIFLMVLAALILISLGGYALHLMLKVRAQKKHEQALIEQAKQ
                     AQKDRYIRILDSIEVIARAMISEQCDFSEGVLRLKPLLDVLGRKLSDYTAMWALYGVV
                     ENMPILDERKNLKRNERMKLDLEREAKEAELESDIKNECYQLLKDIEEMRKAI"
     gene            1718..3085
                     /gene="hemN"
                     /locus_tag="PXB09_001950"
     CDS             1718..3085
                     /gene="hemN"
                     /locus_tag="PXB09_001950"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDL5234033.1"
                     /translation="MSEIIWDLALIQKYNHSGPRYTSYPTALEFNENYTNEDFIRAAA
                     RYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRL
                     VTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAI
                     GFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVE
                     SFMYTLKRVVELNPDRMSVFNYAHLPSRFAAQVKIKEELLPAPETKLTILQNSIEFLG
                     KNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTY
                     AQNRKELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYGI
                     DFKRYFAEDLAFLAPLAEDELLTMNDDSIVVSPRGRLLIRNICLCFDVYSRQLARRQQ
                     FSRII"
     gene            3159..5492
                     /gene="lptD"
                     /locus_tag="PXB09_001951"
     CDS             3159..5492
                     /gene="lptD"
                     /locus_tag="PXB09_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDL5234034.1"
                     /translation="MKQRYSLLSLAVMAACYSNSAAADLKQQCLLGVPHFQGEVVEGD
                     QLRMPVTIEADSAVINQPRDATYTGDVTIKQGNRSIWADQVRVEQDGENARMAYLQGN
                     FNYQDNLIQATGSDATINLLSKDANLANANYQLIGRQGRGTAESGEFGNSKHTLKNAS
                     FTSCLPNDNSWQIEANEMIQHVDEEYAEMWHARFKVLGMPVFYSPYLQFPIGDRRRSG
                     LLIPSFERSSKNGWTYSQPFYWNIAPNMDSTITPTYYSRRGWQISPEFRYLTKIGQGL
                     VATEYMAKDRLSEYQPGNDDRKRYLFHWRHAMSFLTDWRFSVDYTKVSDRRYFSDFDS
                     DYGSSTDGYATQNFKLGYYQPNYNISISGKKFQTFDELDIGPYRVLPQIDFNYYKNDL
                     IKGGDFKFFAQAARFENDSKLMPKAWRFHAEPTLNFPLANRYGSLNLETKLYATYYQQ
                     TKGSESTEEIKKSVSRVLPQIKLDFKTVLESDKQLFSGYTQTLEPRVQYIYRPYKDQS
                     DIGSKAHRSVSLGYDSALLQNDYFSLFNDRRYSGLDRISSANLVTAGGTTRFFKEATG
                     EEVFNFSLGQTYYISPSKIDDTSDNSTKGHTTSWAAESNWKFHKNWNWHGSYQYDTRL
                     NQTALANMSLQYKPQSDKLIQLNYRYASKDYINQNLNTNKYGQSIKQVGGVLGWELTD
                     KVSVMTSYYHDLALKKPVEGQISLNYNTCCWAANVYVARRLVSTPVGSSDTINDFYYD
                     NKFGINFELRFGTNYSNGVTRMLKRGIIPYTEPYSIN"
     gene            complement(5634..8273)
                     /gene="ppc"
                     /locus_tag="PXB09_001952"
     CDS             complement(5634..8273)
                     /gene="ppc"
                     /locus_tag="PXB09_001952"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDL5234035.1"
                     /translation="MNQQYSTIQHNIHMLGEFLGETIRDAQGNYILELIESIRVLSRN
                     SRAGDENAREQLLDKLANISNDDVLPVARAFSHFLNLTNIAEQHQTVSRHHIDESLGS
                     RSLDSLFLRLKSQNIPVEKVIKTVESLMIDLVLTAHPTEVTRRSLGHKHVEINKCLNL
                     LEHDDLTEAESYKIKRRLMQLIALAWHTNEIRTQRPTPVDEAKGGMAVIENSLWKAVP
                     EFCRQLNFYLEKHFGVQYPVNLAPVRFSSWMGGDRDGNPFVTAETTRRVLRMNRWKAT
                     ELFLQDIKNLAEELSITQCTPAFRAKYGNHLEPYRVLLKVLRQKLINTEIYYAELLEG
                     KISTIDESDILTSDQQLWEPLFDCYESLQACGMRIIANGALLDCLRRINCFGLGLSRL
                     DIRQESTRHEMAIAEITRYIGLGDYAHWTEDDKQAFLVRELSSRRPLIPTNWTPSPET
                     KEVLDTCKIVAEQPEGVISAYVISMAREASDVLSVHLLLKEAGCKFTIPVAPLFETLG
                     DLDHSEKVMTDLFNIGWYRGVINNYQMIMIGYSDSAKDAGMFAAGWAQYRAQEALVNL
                     CEKYNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPA
                     VAVESLELYASAILEANIFPPPEPKQQWRDVLAKASDISCQIYRDMVRGELDFVPYFR
                     SATPEQELSRLPLGSRPAKRNPKGGVESLRAIPWIFAWMQNRLMLPAWLGAGQALQQL
                     IDEGNETLLKEMCNEWPFFSTRIGMLEMVFSKADIWLAEYYDQRLVEPKLHRLGNMLR
                     TQLQADLKTVLALAHDGQLMADLPWIAESIALRNIYTDPLNLLQVELLDRIRKQGENA
                     DPVLEQALMITITGIAAGMRNTG"
     gene            8398..9366
                     /locus_tag="PXB09_001953"
     CDS             8398..9366
                     /locus_tag="PXB09_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family transporter"
                     /protein_id="HDL5234036.1"
                     /translation="MCLKLLFGFDNLPVVYVLFTVIQVGLSINGFKGIKWLENVSCVF
                     LIGILAYMLYVVNTKFSVEIGERFANIEGTWGMPFWAATTAFLGIYSTMILNASDYSR
                     HVKKGTTPTATGVIYVLSILPVTLFMGLIGLLVTAATGNSDPIEVFATAMDNKFLTVI
                     TLLFIAFAQVTTNVLNNIVPPSYILMDSFKMKWSHATILVGILSICVMPWKLVTAESA
                     DGLSLFIKIYSAFLGPIFAVMVVDYYILRKRTLNVNDLYNKEGIFKGINWAAIIAIAI
                     GSFCSLIVVDLSWYVSLIPSGLSYYILMRVLKSSEAFRKGTVLEHQ"
     gene            complement(9415..9585)
                     /locus_tag="PXB09_001954"
     CDS             complement(9415..9585)
                     /locus_tag="PXB09_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5234037.1"
                     /translation="MLKCKQITELVSLSQEQKLTLKQRVNVQVHLMLCSRCRAFSQNC
                     KTVDKLMKEFNS"
     gene            complement(9586..10167)
                     /locus_tag="PXB09_001955"
                     /pseudo
     CDS             complement(9586..10167)
                     /locus_tag="PXB09_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252416.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
BASE COUNT         3096 a         1960 c         2186 g         3042 t
ORIGIN      
        1 tggcatagta gttccttttt gatgtatcaa tactaaaaat aacctgtatt attctagcag
       61 atttctgggt aatcgaggag ttgataacat ttaaaaatta gcgttttgca aaattttcca
      121 aaaaaagacc gcttgttagg ctataatagc caaccaaaca gaccaattca aaggagaatc
      181 ggtatggaat atcaatttac ccatagtatt cacggggtgg tggcaaaatg ttcgatggat
      241 cacgaggcgt ttgctcgttg gttgaatgcc gaaataacgg aaaatcctag ccagttagcc
      301 cctattttcg ctgaaataga gaagtgtcga gccgcatttc cgaatcatta tgaatgtgtg
      361 tttgaagggc gggagtatag tctctatttt gattatgatg aagtgatggc aaaagcaaac
      421 aatttagatg ctgcttttga tgatgaggaa atggaagaag gctttcaatt ttacaatgaa
      481 gagagcatcg cattttgtgg cttagatgac tttgagaaat ttttgaaagc ctaccaacat
      541 tttgtgcaaa cttatcattg attgaaatga ttaattgaaa ccaaagctat taagggaatc
      601 taattccttg tagaatagcc gtttatagca attttaagat attaaattta tgagtcgtac
      661 taaaaaaaca cgtcgtatta ccgacattat gccggcaaga aagaccgata aacctaaaca
      721 gcccatgcct aaattaggtg gggggaaaaa tcgcaaactg acccgttatg agttagatgc
      781 tcaagcccgt gaggaaaaac gtaagcgtaa acataaaggc ttgccgacag gctcacgcaa
      841 tgctgatccg gcagagcaga aaaaagcagt ggtgaaagag gtgaaagatc cgcgtatcgg
      901 tagccgtaaa aaagtgccgt taatggtgga atttgtgaac cagccggaaa aagggcggac
      961 gattaaggct gtgccggttg agccaatcaa accaacgctt tcaccggaac aagagctgga
     1021 gcagttagaa aataacgaat gtttaaatca gttgttagat gatttggagg cgggcaaaac
     1081 cttatccgca gaagatcaga aatttatgaa tgaatgttta gatcgcattg atgaattaat
     1141 gactgagctt ggcatcgaat atgaagatga agagggcgat aatggcgatg cgttattacg
     1201 ccaatttgaa acgatggata ttaataaatt ccgctaggta gccgattatg atgctaagaa
     1261 tattcctgat ggtgcttgcc gctttgattt taatttcgct gggcgggtat gcactgcact
     1321 taatgctgaa agtgcgagct cagaaaaagc acgaacaagc actgattgaa caggcaaagc
     1381 aagcacaaaa agatcgttat attcggattt tagacagcat tgaagttatt gctcgggcaa
     1441 tgatttcaga acagtgcgat ttttcggaag gcgttttacg tttaaaaccg ctattagatg
     1501 ttctcggcag aaaattaagc gactatacgg cgatgtgggc gttgtatggc gtggtagaaa
     1561 atatgccgat tttagatgaa cgcaaaaatt taaaacgtaa cgaaagaatg aagttggatt
     1621 tagagcggga agcaaaagaa gcggagcttg aatcagacat caaaaatgag tgttaccaat
     1681 tattaaaaga tattgaagaa atgagaaagg caatctaatg tcagaaatta tttgggattt
     1741 agcccttatt caaaaatata accattcagg gcctcgttat acctcttacc caacagcgtt
     1801 ggagtttaac gaaaattaca ccaatgaaga ttttattcgt gctgcagctc gttaccctga
     1861 gcgtccgctt tcgctttatg tgcatattcc gttttgccat aaactgtgct atttctgtgg
     1921 ctgtaataaa gtgattactc gtcatcgcca taaagttgaa atttatttag attatttaga
     1981 gcgtgaaatt aaaactcgcg cacctctgtt tcaaaatcgt ttagtgaccc aaatacactg
     2041 gggtggcggt acgccgactt atttagacga agatcaatcg gcacgtttaa tgcaaatgct
     2101 acgagccaat tttgatgtga gcgatgatgc ggaaatcagc attgaaatgg atccgcgtga
     2161 aatcgaatta agtatgttgg atcacctgcg tgctatcggt tttaaccgtc tgagtatggg
     2221 tattcaggat ttcgataaag aagtgcaacg tttggtgaat cgtgagcaag atgaagagtt
     2281 tatttttgcc ttgatgaaac gggcaaaaga acttggtttt gtttcaacta atgtggattt
     2341 gatttacggc ttgccaaaac agaatgtgga aagctttatg tacaccttaa aacgtgtggt
     2401 agagctaaac cctgatcgta tgagcgtatt taactatgcc cacttgccaa gccgttttgc
     2461 tgcacaagtg aaaattaaag aagagttgtt gccggctccg gaaaccaaat tgacgatttt
     2521 gcaaaattcc atcgaatttt taggcaaaaa cggttataag tttatcggta tggatcactt
     2581 tgctaaacct gatgatgagt tagctattgc acaagaaaaa ggcattttac accgtaactt
     2641 ccaaggctat accactcaag aagagtgtga tttattggga atgggcgtat cggcaatcag
     2701 cttactcggc gatacttacg cccaaaaccg caaagaatta caacaatact atgctgatgt
     2761 tgaaaccaac ggtattgcgt tgcataaagg cattgcgtta acccaagatg attgcattcg
     2821 ccgtgatgtg ataaaagcct tgatttgtaa tttcaaatta gattttgcca ccattgaaaa
     2881 gcaatatggt attgatttta aacgttattt tgccgaagat ttagctttct tagcgccgtt
     2941 ggcggaagat gaattattaa cgatgaatga cgacagcatt gtggtttccc cacgagggcg
     3001 tttattgatc cgtaatattt gcttatgctt tgatgtctat tcaagacaat tagcgagaag
     3061 acagcagttt tcccgtatta tttaatgagc aagcggtcga ttttggtaaa aattttgcaa
     3121 aaacagaccg cttgttcccg gcttataaag gaaaaatgat gaaacagcgt tatagcttac
     3181 tttctcttgc tgtgatggca gcttgttata gcaacagtgc cgcagctgat ttaaagcaac
     3241 aatgtttact tggcgtgccg cattttcagg gcgaagtggt agagggcgat caacttagaa
     3301 tgcctgttac cattgaggct gacagtgcgg tcattaacca gcctcgtgat gccacctaca
     3361 ccggtgatgt aacgatcaaa caaggtaacc gttcgatttg ggcggatcag gtgcgggttg
     3421 agcaagatgg cgaaaatgcc cgaatggcgt atttgcaggg taattttaac taccaagata
     3481 atttgattca ggcaaccggt tcagatgcga ccatcaatct gctttccaaa gatgcgaatt
     3541 tagctaatgc taattaccaa ttaattggca gacaagggcg tggcacggca gaatccggtg
     3601 aattcggcaa cagcaaacac acgctgaaaa atgccagttt cacttcgtgc ttaccgaatg
     3661 ataattcgtg gcaaattgaa gcgaatgaaa tgattcagca cgttgatgaa gaatatgcgg
     3721 aaatgtggca cgcccgtttt aaagtgctgg gaatgccggt attttattcg ccttacttac
     3781 aatttccgat tggcgaccgc cgccgtagtg ggttattaat tccaagtttt gagcgttcaa
     3841 gcaaaaacgg ctggacatat tcgcaaccgt tttattggaa tatcgcaccg aatatggact
     3901 cgaccatcac tccaacttac tattcacgcc gtggttggca aatcagcccg gaatttcgtt
     3961 atttaacgaa aatcgggcaa ggcttagtgg caaccgaata tatggcgaaa gatcgtttaa
     4021 gcgagtacca accgggaaat gatgatcgta aacgctattt attccactgg cgtcacgcaa
     4081 tgagtttttt aaccgattgg cgtttctcgg tcgattacac caaagtgagc gacagacgtt
     4141 atttctctga ttttgattcg gattatggta gcagtactga tggctatgcg acgcagaatt
     4201 ttaaattagg ctactatcag ccgaattata atatctcaat ttcaggtaaa aaattccaaa
     4261 ccttcgatga gttggatatc gggccttatc gcgttctgcc acaaattgat tttaactatt
     4321 ataaaaacga tctaattaaa ggcggagatt tcaaattctt tgcccaagca gcccgttttg
     4381 aaaatgatag taaattaatg ccaaaagcgt ggcgtttcca cgctgagcca acactgaatt
     4441 tcccattagc gaaccgctat ggtagcttaa atttagaaac caagctctat gcaacctact
     4501 atcaacaaac gaaaggtagt gagagtacgg aagaaattaa gaaaagtgta agtcgtgtac
     4561 tgccacagat taagctcgat tttaaaaccg tgttggaatc cgataaacag cttttctctg
     4621 gctatactca aacgcttgag cctcgggtgc aatatattta tcgcccatat aaggatcaaa
     4681 gcgatattgg ctcgaaagca catcgaagtg tgagcttagg ctatgactct gcattattgc
     4741 aaaacgacta tttctcactg tttaatgaca gacgttatag cggtttagat cgtatttcgt
     4801 cagcaaattt agtcaccgca ggtggcacaa cccgtttctt taaagaggca accggtgaag
     4861 aggtgtttaa tttcagctta ggacaaactt attatataag cccgtctaaa attgatgata
     4921 cctcagataa cagcactaaa ggtcatacga cttcatgggc agcggaatct aactggaaat
     4981 tccataagaa ttggaattgg catggtagct atcaatatga tactcgttta aaccaaacgg
     5041 cgttagcgaa tatgtcattg caatacaaac cacagtcaga caaattgatt cagcttaatt
     5101 accgctatgc aagtaaagat tacatcaatc aaaacttgaa cacgaataag tatgggcaat
     5161 ccattaaaca agtgggcggt gtgctaggtt gggaattaac cgataaagtg tcggtaatga
     5221 ccagttatta ccacgacctt gcattgaaaa aaccggtgga agggcaaatt tcgcttaact
     5281 acaacacttg ctgttgggcg gcaaatgtgt atgtggctcg tcgcttagtt tcaacgccgg
     5341 taggttcatc tgatacgatc aatgatttct actatgacaa taaattcggc attaactttg
     5401 agctacgctt tggcacaaac tacagcaatg gtgtaacccg tatgctaaaa cgaggtatta
     5461 ttccttacac cgagccgtat agcattaatt aacaaagtaa aaacaaataa gtaaaaatac
     5521 aaatcggggc gaaaaatatt tgccccgatt tttttatatt tggctgataa gcggttaaat
     5581 tctgttggaa ttttgcaaat cttccgctaa attcaaccgc ttgccatcga aacttaacct
     5641 gtatttcgca tacctgcggc aatacctgtg atggtgatca tcaatgcttg ctctagtaca
     5701 ggatcagcat tttcaccttg tttgcgaatc ctatctaaca attctacctg aagtagattg
     5761 agcggatcgg tataaatatt gcgtagtgca atcgattctg cgatccaagg taaatcggcc
     5821 attaattgtc catcgtgagc cagtgcaagt acggttttaa gatcagcctg tagttgcgta
     5881 cgcaacatat tgcctaaacg gtgtagtttt ggctcgacta ggcgttggtc gtaatattcc
     5941 gccagccaaa tatcagcttt actaaatacc atttccagca ttccgatacg ggtcgagaaa
     6001 aacggccatt cgttacacat ttcttttagt aaggtttcat taccttcatc aatcaactgt
     6061 tgcaatgctt gccctgcacc taaccaagca ggtagcatta agcggttttg catccaagcg
     6121 aaaatccaag gaattgcacg caaactctcc actccgcctt ttggattacg ttttgcaggg
     6181 cgtgagccaa gcggcagacg ggaaagttct tgctctggtg tagcagagcg gaaatacggt
     6241 acgaagtcta gctcgccacg caccatatca cggtaaattt ggcaagaaat atcggaggct
     6301 tttgctagca catctcgcca ttgctgcttt ggctccggtg gtgggaaaat attcgcttct
     6361 aaaatcgcac tggcatagag ttctaaactt tcaactgcca cggcaggtaa gcctaattta
     6421 aagcggatca tttctccttg ttcggtcact cgtaagccat ttttgagtga gcgaggtggc
     6481 tgagaaagta aggctgcgtg agccggtgcg ccaccacgcc cgatagtacc accacgaccg
     6541 tggaataagg ttaattcaat attatatttt tcacataaat taaccagagc ttcttgcgcc
     6601 cgatattgcg cccagccggc agcaaacatt ccggcatctt tggcggaatc agagtagccg
     6661 atcataatca tttggtaatt gttgatgacg ccacgatacc agccgatatt aaataaatcg
     6721 gtcatcactt tttcactatg atctaaatcg cctagcgttt caaataatgg ggcaaccgga
     6781 atagtaaatt tgcaccccgc ctctttgagt aaaaggtgaa ccgagagtac atcagaggcc
     6841 tctcttgcca ttgaaatgac ataggctgaa atgacacctt caggttgctc ggcaacaatt
     6901 ttacaagtgt ctaacacttc tttagtttca gggcttggag tccagttggt tggaatcaat
     6961 gggcggcgag aactgagttc acgcactaag aatgcctgtt tatcatcttc cgtccagtga
     7021 gcataatcgc ctaagccgat atagcgggta atttctgcaa tcgccatttc gtggcgggta
     7081 ctttcttggc gaatatctaa gcgtgataaa cctaaaccaa aacagtttat acgacgtaag
     7141 caatctagta atgcaccatt tgcaataatt cgcataccac aggcttgtaa tgactcatag
     7201 caatcaaaaa gcggttccca caattgctga tctgaagtta aaatgtcact ttcatcaata
     7261 gttgaaattt taccttccaa taattccgca tagtaaattt cggtattaat taatttctgg
     7321 cgtaatactt ttagtaatac gcgatatggc tctaaatggt tgccatattt agcacgaaat
     7381 gcaggggtac actgtgtaat cgataattct tcagcaagat ttttaatatc ttgtaagaac
     7441 aattccgtgg ctttccaacg gttcattctt aatacacggc gagttgtttc tgccgtgacg
     7501 aacgggttac cgtcacggtc tccgcccatc caagaagaaa aacggacagg ggctaaattt
     7561 accggatatt gcacaccaaa gtgtttttct aaatagaagt taagctgacg gcaaaattcc
     7621 ggcacggctt tccataaact attttcaatg actgccatac cgcctttggc ttcatcaaca
     7681 ggggttgggc gttgggttct gatttcatta gtatgccaag caagggcaat cagttgcatt
     7741 aaacggcgct tgattttata gctttctgcc tcagttaaat catcatgttc caacaaattc
     7801 aaacatttat tgatttcaac gtgtttatgc cccagcgaac ggcgggttac ttccgttggg
     7861 tgagctgtta gcactaaatc aatcattagg ctttccacgg ttttaatcac tttttcaacg
     7921 gggatatttt gtgattttag acgaaggaac agagagtcta atgagcgact accaagtgat
     7981 tcatcaatat gatggcgaga aacagtttga tgttgttcag caatatttgt tagatttaga
     8041 aaatggctaa atgcacgtgc aacgggtaag acatcatcgt tagaaatatt ggctaattta
     8101 tctaatagct gttcacgggc gttttcatcg ccggcacgag aattgcgaga taacacacga
     8161 atgctttcga tgagttctag aatgtaattt ccttgcgcat cacgaatcgt ttctcccaaa
     8221 aattcaccta acatatggat attatgctga attgttgaat attgctggtt cataaaaaat
     8281 tcctatggta aacataaatt aaattaggtc taaatatgcc gaaaatcgct gaaaatagca
     8341 aatagattta atttaatttt tgaattaaat gataaaacgc aaaaaatagc tgtcaatatg
     8401 tgtttaaaac tgttgttcgg ttttgataac ttgcctgttg tttatgtgct attcactgtt
     8461 attcaagttg gcttatccat taatggtttt aaaggtatta aatggttgga aaatgtttct
     8521 tgtgtgttcc tcatcggtat tcttgcttat atgctttatg ttgtgaatac aaaattctct
     8581 gtagaaatag gcgagcgctt tgccaatatt gaaggcactt ggggaatgcc attctgggct
     8641 gcaactacag cattcttggg tatttattca acaatgattt taaatgcttc cgattattct
     8701 cgccacgtta aaaaaggaac aaccccaaca gcaacaggtg tgatttatgt attatcaatc
     8761 ctccctgtaa ccttatttat gggtttaata gggttgttag ttacggcagc tacaggcaat
     8821 agtgacccaa ttgaagtatt tgcaactgca atggataata aatttttaac agtaataacg
     8881 ttattattca ttgcttttgc acaggttacg acaaacgtgt tgaataatat tgttccgcca
     8941 tcttacattt taatggattc atttaaaatg aaatggtcgc atgccaccat tttagtgggc
     9001 attctttcta tatgtgtaat gccttggaaa ttggtaactg ctgaatcagc agatggatta
     9061 tctttgttta ttaaaattta ctcggcattc ttaggcccta tttttgcggt aatggtcgtc
     9121 gattactaca tcttaagaaa acgtacttta aacgtaaatg acttatataa taaagaaggt
     9181 attttcaaag ggattaactg ggcagcaatt attgcgattg ctatcggttc gttttgctca
     9241 ctgattgtgg tggatctctc ttggtatgtc agtttaattc catcaggctt gagctactat
     9301 attttgatga gggtgttaaa aagttccgaa gctttccgta aagggacagt gctagaacat
     9361 caataagatg acaagcggta aaatttatta aaaattttac cgcttgcttt tacgctaaga
     9421 gttaaattct ttcattagct tatctacggt tttgcagttt tggctaaagg ctctgcaacg
     9481 agaacaaagc attaaatgaa cttgcacatt aacacgttgt tttaatgtca gtttttgttc
     9541 ttgggacaga gaaactaatt cggtaatttg cttacatttt aacatttaac ctccaaacca
     9601 tttttgactt aaacagacct gtaactgcaa tcttgcccga tacagtaagg tatgcacatt
     9661 tgctggtgaa atctcacatt ctgcgcaaat ttcttcggtt tccatttcca aatgggaacg
     9721 catcataaac acccttgctt gatttgccgg cagattattt aggcaaaatt caaatacttg
     9781 ccagaattga gcggaatagg tatggctttc ggtgttcttc cactcattag attgataagc
     9841 atctttatcc caaccgccat tttcgttaaa caatttatcg gcaagatcgt gatcgtcttc
     9901 ttccatcagc tcagatactg ccaccaattt gcctttggct ttcactaaat ctacgatctt
     9961 gttttttaaa attgcaaaaa tctacgtttt taacgcactt tcacctttga agctgtcggc
    10021 atatttataa gcgctgacaa acgcctcttg caccacatct tcggcaagtt cgttattttt
    10081 taactgtaaa aaggcaaact tcaccatttg cagacgaata tcttctagct gcgaggggga
    10141 aatttgccgt aaagccggtt ggctcattgc gtgatccttt ggtaaaaaat tgagagaaac
    10201 taaccgcttg tatcctattt cataaggttt tacccaactt aggggatatt ggtatgaagt
    10261 atttttaaac ctaacatact aatc
//
LOCUS       DANLTI010000097        10228 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.097, whole genome shotgun sequence.
ACCESSION   DANLTI010000097 DANLTI010000000
VERSION     DANLTI010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10228
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.097"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            153..833
                     /locus_tag="PXB09_001956"
     CDS             153..833
                     /locus_tag="PXB09_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00153 family protein"
                     /protein_id="HDL5234038.1"
                     /translation="MALNNILGLFAQSPLKPLQKHSNKVTECSELLESFFEATFEHDW
                     EKAAEVRGKIVDLERRADALKREIRLKLPRGLFMPVERGDLLELVTQLDKLANYSRDI
                     SGRIIGRKLIIPTEMQPLFKKFLSRSIDASRQVRKVLDEMDQLLETGFRGRELDFVNK
                     MILELDQIEDDTDQYQITLRHTLLELEKNLNPIDVMFLYKCIERISVLADQAQRIGSR
                     IELMLAKS"
     gene            845..2113
                     /locus_tag="PXB09_001957"
     CDS             845..2113
                     /locus_tag="PXB09_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDL5234039.1"
                     /translation="MELLNQYGSILVIITAIVGFMMAFGIGANDVSNAMGTSVGSGTI
                     TIKQAILIAMVFEFAGAYLAGGEVADTIKSGIIDPAQFANSPDILVLGMMASLCAAGM
                     WLIIATKMGWPVSATHTIIGAVIGFALITIGSDAIQWDALGGIVGSWFVTPILAGIVA
                     YSIFINSQKLIFNRSNPFKQAKKYGPMYMGITIFILVIVTVSKGLKHVGLHLDTAETL
                     GISFALALLAFIIGYFYFRSKSFAMKARAEEKGFAGVEKIFSILMLITACAMAFAHGS
                     NDVANAIGPLAAVESIVRSGGMIEGKTTLAPWILPLGALGMMIGLAIMGKNVMATVGT
                     GITDLTPSRGFAAQFACAVTVVIASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVI
                     RNIVISWVITLPVGAVLSIIIYYILSAIFY"
     gene            2168..2779
                     /locus_tag="PXB09_001958"
     CDS             2168..2779
                     /locus_tag="PXB09_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDL5234040.1"
                     /translation="MKKLSSALLSCFLLGLSSPALTADTYITENLSTFMRKGAGDQFR
                     ISGAIQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIPQLKQQVQDL
                     TNRLSKIDTEWQQRTAEMQRRTQDSVQKSSDLVEENAQLKRELEILKNKNRDLETMHD
                     SEKREIVIQWFIYGGAVLGAGLLLGLLVPFLIPRRRRNNSGWA"
     gene            complement(2833..4131)
                     /gene="aroA"
                     /locus_tag="PXB09_001959"
     CDS             complement(2833..4131)
                     /gene="aroA"
                     /locus_tag="PXB09_001959"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDL5234041.1"
                     /translation="MEKLTLTPISRVEGEINLPGSKSLSNRALLLAALATGTTQVTNL
                     LDSDDIRHMLNALKALGVKYELSDDKTVCVVEGIGGAFKVQNGLSLFLGNAGTAMRPL
                     AAALCLKGEEKSQIILTGEPRMKERPIKHLVDALRQVGAEVQYLENEGYPPLAISNSG
                     LQGGKVQIDGSISSQFLTALLMSAPLAEGDMEIEIIGDLVSKPYIDITLSMMNDFGIT
                     VENRDYKTFLVKGKQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQG
                     DRLFADVLEKMGAKITWGEDFIQAEQSPLKGVDMDMNHIPDAAMTIATTALFAEGETV
                     IRNIYNWRVKETDRLTAMATELRKVGAEVEEGEDFIRIQPLALENFQHAEIETYNDHR
                     MAMCFSLIALSNTEVTILDPNCTAKTFPTYFRELEKLSVR"
     gene            complement(4177..5271)
                     /locus_tag="PXB09_001960"
     CDS             complement(4177..5271)
                     /locus_tag="PXB09_001960"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5234042.1"
                     /translation="MQFINIANEGVKSLSPYQAGKPIEELERELGIQNIIKLASNENP
                     FGFPESAKKAILNQLDDLTRYPDSNGFELKTTIAQKFGVQANQITLGNGSNDLLELFA
                     HTFAGEQDEIIYSQYAFIVYPLVTKAINAVAREILAKNWGHNLDAFLAAITEKTKLIF
                     IANPNNPTGNFLTQAEIEGFLAKVPANVIVVLDEAYTEFTAPQERVDSFGLLAKYPNL
                     IVSRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALASAIAVMNDDEFVK
                     KVAENNRLEMARYEAFCQANGLEYIPSKGNFITIDFKRPAAPIYEALLREGVIVRSIA
                     GYGMPNHLRISIGLPQENERFFTALLKVLA"
     gene            5543..6862
                     /locus_tag="PXB09_001961"
     CDS             5543..6862
                     /locus_tag="PXB09_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDL5234043.1"
                     /translation="MNHLLYSVEDKPPFGLSLLLASQHLLAALGGIIAVPLVLGNVLK
                     LSTADTIILVNAALLISGIVTIIQCRGIGPIGIRLPSVMGTSFTFVAAALAIGFSESG
                     IAGIMGASLVGSLVMIIGSFFMPYIRKLFPPVVTGTVIMMIGLSLIPVAVDWFAGGQR
                     TDPHYATPENLIMASFVLIIVVALVQWGKGIFSAAAIVIGMMIGYIVSLALGWVSFNG
                     VKEAQLFALPQPLHFGLEFPISGIIGMSIAYLVTIVESSGNFLALGNATKTEITGKHL
                     RGGVLCDGLGSAFAAIMSTTPFSSFSQNIGVISLTGVASRYVVAFTGALLVLAGLFPV
                     FGALIVSIPLPVLGGAGLMMFAMIIAAGIQMLDNIQRSKRNGLIIAISIGCGLAVTTR
                     PELLDKLPHFFKEVFGSGITVGSLLALILNLVLPEDKITKKENKSDE"
     gene            complement(7032..8975)
                     /gene="ftsH"
                     /locus_tag="PXB09_001962"
     CDS             complement(7032..8975)
                     /gene="ftsH"
                     /locus_tag="PXB09_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDL5234044.1"
                     /translation="MVKNILLWVVIAIVMMTAYEGFNSNFSGSSNTVPYSTFLSDIKE
                     NRLKGVDFKQNDDTILVTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLL
                     SQILISWFPMLLLIGFYVFYMRQMQGGGGRGAMGFGKNKAKMLTADEVKTRFSDVAGC
                     DEAKEEVGEVVEFLRDPTKFQKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFT
                     MAGSDFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDERE
                     QTLNQMLVEMDGFEGSEGVIIIAATNRADVLDDALTRPGRFDRQVTVDLPNVKGREQI
                     LKVHLKKVPLAEGVDPMQIARGTPGYSGAQLANLVNEAALFAARKNKRVVMMEDFEEA
                     RDKINMGPERRSNTMTEKEIINTAYHEAGHVIVGYLMPEHDPLNKVTIVPRGQALGFA
                     QFLPEGDRVSETFTKLESQLSTLFAGRIAEGLIFGEDKITTGASSDIHRATQIARAMV
                     TQWGFSKELGPIFYQNEDGMGAIKGVSEESQKLIDVEMRKIIDRNYQRAKQTLEENMD
                     ILHAMKDALLKYETLDSKQIDDLMARRPVGEPSGWTDTPTKDDNATPPSGEQAADVSS
                     TLEDNPNKDNNIGDSLADTKAEH"
     gene            complement(9096..9722)
                     /gene="rlmE"
                     /locus_tag="PXB09_001963"
     CDS             complement(9096..9722)
                     /gene="rlmE"
                     /locus_tag="PXB09_001963"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDL5234045.1"
                     /translation="MGRKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQT
                     DRLFKPGMTVVDLGAAPGGWSQYVVTQIGSKGRVIACDILDMNPIVGVDFLQGDFREE
                     SVLNALLERVGEDKVNVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSF
                     VVKVFQGEGFDEYLREIRSLFSVVKVRKPEASRDRSREVYIVATGYKG"
     gene            complement(9843..>10228)
                     /locus_tag="PXB09_001964"
     CDS             complement(9843..>10228)
                     /locus_tag="PXB09_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595-like element ISMha4 family transposase"
                     /protein_id="HDL5234046.1"
                     /translation="GLLKRDGKVYTVVVPNTQFATLLPIIREKVKPDSIVYTDFYRSY
                     DVLDVSEFNHFRINHSTHFAENQNHINGIENFGSQAKRHLRKFNGIPKVHFELYLKEC
                     EWRFNHSDLKSQISFLKQLVKGSLG"
BASE COUNT         2881 a         2183 c         1973 g         3191 t
ORIGIN      
        1 tttcttccat tttttgcaaa aaaattatta aaacaaaccg cttgtcttaa aaacataatt
       61 taatttcgtg atctttacta atacatcaag taaaatacgc cggactttac agtaagaagt
      121 cattgtcaat attatcacta tggagatatt ttatggcatt gaataacatt ttaggtttat
      181 tcgcccagtc cccacttaaa ccgttacaaa aacactcaaa taaagtgact gaatgtagcg
      241 agttattaga atcttttttt gaagcgactt ttgaacatga ttgggaaaaa gcagctgaag
      301 tgcgcggtaa aattgttgat ttagaacgcc gcgcagatgc ccttaaacgt gaaatccgct
      361 taaaactgcc tcgtggttta tttatgccag ttgaacgcgg tgatttatta gaactagtca
      421 cacaattaga taagttagca aactattcaa gagatatttc cggtcgcatt attggtcgta
      481 aattaatcat tcctaccgaa atgcaaccac ttttcaaaaa attcctttct cgtagtattg
      541 atgctagccg tcaggtacgc aaagttttgg atgaaatgga tcagttatta gaaactggtt
      601 ttagagggcg agagcttgat ttcgtcaata aaatgattct tgaacttgac caaattgaag
      661 atgataccga ccaatatcaa attacattac gtcatacact tcttgagtta gaaaaaaacc
      721 tgaaccctat tgatgtgatg tttttataca aatgtattga aagaatcagc gttctagctg
      781 accaagccca gcgaattggt tctcgtattg aacttatgct ggcgaagtca taggagaaaa
      841 ttaaatggaa ttactcaatc aatatggctc aatactggtg attattactg ctattgtagg
      901 gtttatgatg gctttcggta ttggtgctaa tgatgtttca aatgccatgg gaacatccgt
      961 cggctctgga acaattacga ttaaacaagc tattttaatt gctatggtat ttgaatttgc
     1021 tggtgcttat ctggcaggcg gtgaagtcgc agatacaatt aaaagtggca ttattgatcc
     1081 ggcacaattc gccaatagcc ctgatatcct ggtacttgga atgatggcat ctctctgtgc
     1141 tgccggaatg tggctaatta ttgcaactaa aatgggttgg ccggtttcag caactcacac
     1201 aatcattggt gccgttattg gttttgcatt aatcactatt ggttcagatg caattcaatg
     1261 ggatgcatta ggtggaattg ttgggagttg gtttgtgacc cctattcttg cggggatcgt
     1321 agcatattcg atctttatta actcacaaaa actgatcttt aaccgctcaa acccattcaa
     1381 acaagcgaaa aagtatggcc cgatgtacat gggaattact atttttattt tagttattgt
     1441 aaccgtgtca aaaggcttaa agcacgtagg attacatcta gatacagctg aaacattggg
     1501 aatttcattc gcgcttgcct tacttgcttt tatcattgga tatttttatt tccgcagtaa
     1561 aagctttgca atgaaagctc gtgcagaaga gaaaggcttc gctggcgttg agaaaatttt
     1621 tagtatttta atgcttatta cggcctgtgc tatggctttt gctcatggct ctaatgatgt
     1681 tgctaatgct attgggcctc tagctgctgt tgaatctatt gtaagaagtg gtggaatgat
     1741 tgaaggtaaa acgactttag ccccttggat tctcccacta ggcgccttag gtatgatgat
     1801 tggtttagct attatgggca agaatgtaat ggctacagta ggtactggta ttaccgacct
     1861 tactccaagc cgtggctttg ctgctcaatt tgcctgcgcc gtcacggttg tcattgcatc
     1921 aggtactggt ttaccaatat caacaaccca aacgcttgta ggagcagtat taggtgtggg
     1981 attcgcccgt ggtattgctg cacttaactt aggcgttatt cgtaatattg ttatatcatg
     2041 ggtaattacc ttgcctgtag gtgctgtgct ttcaattatt atctattata ttttaagcgc
     2101 tattttctat taatttttca aaaagaatac aggcaactgt attcttccta gctttagagg
     2161 aatatatatg aagaaattat catcagctct tctgtcttgt tttttactcg gcctatctag
     2221 ccctgcttta acggcagaca cttacattac tgaaaatctg agtacattta tgcgcaaagg
     2281 tgctggtgat caattccgca tttcaggcgc tattcaagca ggtgaaaaag tcacagtatt
     2341 agatcgtaaa gagcgctaca gtctgattcg agatagtcgt aaccgtgaag gttgggtact
     2401 taattcagac ttaagcgata ctgctagtcc aaaagagctg attcctcaat taaaacaaca
     2461 ggttcaagat ttaaccaatc gcctgagcaa aatcgatacc gaatggcaac aacgtaccgc
     2521 agaaatgcaa cgtagaacgc aagattcagt gcagaaaagc agtgatttgg ttgaggaaaa
     2581 tgcacaacta aaacgtgaac tggaaatcct gaaaaacaaa aatcgtgatt tagaaacaat
     2641 gcacgattcc gagaaacgtg aaatcgtgat tcagtggttc atctatggtg gtgctgtgtt
     2701 aggcgcaggt ttactacttg ggttactcgt gcctttcctg atccctcgcc gcagacgtaa
     2761 caacagcggt tgggcttagt ctgccacaat aaaacgtaaa aaggattcag ttttctgaat
     2821 ccttttttac ttttatctga ccgataattt ttccaactcc ctaaagtaag tcgggaacgt
     2881 tttagcggta caatttggat ctaagatcgt cacttctgta ttcgataacg caattaatga
     2941 aaaacacatt gccatacggt gatcgttata ggtttcaatt tcagcgtgct ggaagttttc
     3001 taacgcaagc ggttgaatcc gaataaaatc ttccccttct tctacctctg ccccgacttt
     3061 acgcaattcg gttgccattg ctgtcaagcg gtcggtttct tttacccgcc agttataaat
     3121 attgcggata actgtttctc cttcggcaaa taaagcggtt gttgcaatcg tcattgccgc
     3181 atcaggaata tgattcatat ccatatctac gccttttagc ggggattgct cggcttgaat
     3241 aaaatcctct ccccaagtga tttttgcccc cattttttcc aacacatcgg caaacaagcg
     3301 gtcgccttgg atcgattttt taccaatgcc cgttactttt accttgcctt taatcgcacc
     3361 ggaggctaag aaataagagg cagaagaggc atctccctcc accaaataat taccttgtgg
     3421 agcaacatag ccttgtttac ctttaactaa aaaggttttg taatctcgat tttcaaccgt
     3481 aataccaaaa tcgttcatca tcgaaagggt aatatcaata taaggttttg ataccagatc
     3541 accgataatc tcaatttcca tatcgccttc cgctaatggg gcagacatca gcaatgcggt
     3601 tagaaattgg ctggaaatcg agccgtcaat ttgcactttt ccgccctgca aaccgctatt
     3661 gctaattgcc aacggtggat agccttcatt ttctaaatac tgtacctctg cccctacttg
     3721 gcgtaaagca tcgactaagt gtttaatcgg gcgttctttc attcttggtt caccggtaag
     3781 aatgatttgg gatttttcct caccttttaa acacaatgct gctgcaagtg gtcgcattgc
     3841 cgtgcctgca ttgccgagaa acagtgataa gccgttttga accttaaaag ctccaccaat
     3901 cccttcaact acacagacgg ttttatcgtc cgatagctca tatttcacgc ctaacgcttt
     3961 taaggcattg agcatatgtc gaatatcatc actatctaat aaattggtca cttgagtcgt
     4021 accggtggct aaggcggcta ataataaggc tcggttagac aggcttttag aaccaggtaa
     4081 attgatctcg ccttctactc gggaaatcgg ggttaaagtt agtttttcca tttttctctt
     4141 taaatttgta aaattttcat aaaaggtaac cgcttgttaa gctaacactt tcaataaggc
     4201 agtaaaaaat ctctcgtttt cttgcggtaa accgatacta atgcgtaaat gattcggcat
     4261 tccataacct gctatcgagc gaacaatcac gccttcacgc agtaatgcct cataaatcgg
     4321 agcggcagga cgtttgaaat caatagtaat aaaattgccc ttagaaggga tatattccaa
     4381 gccgtttgct tggcagaaag cctcatagcg agccatttcc aagcggttat tttctgccac
     4441 ttttttgaca aattcatcat cattcattac cgcaatcgct gaagctaagg caagactatt
     4501 gcagttaaac ggctggcgaa cacgatttaa taaatccgca atttcagggt ttgaaaccgc
     4561 ataaccaatc cgaagcccgg ctaagccgta agccttagag agtgaacgtg acacaattaa
     4621 attcgggtat tttgccaata agccaaacga atccacccgt tcttgaggcg cagtaaactc
     4681 ggtataagct tcgtccagca ccacgattac atttgccggc actttagcta aaaagccctc
     4741 aatttccgct tgggttaaaa aattaccggt cggattattc gggttggcaa taaaaattaa
     4801 tttagttttt tcggtaattg cagccaaaaa ggcatctaaa ttgtgtcccc aatttttagc
     4861 cagaatttca cgggcaacgg cattaatcgc tttcgtcacc aacggataca caataaacgc
     4921 atactgagaa tagataattt catcttgctc accggcgaag gtgtgggcaa acagctctaa
     4981 taaatcgttt gagccattgc ctaaggtgat ttgattggct tgtacgccaa atttttgggc
     5041 aatagtggtt tttaattcaa agccgtttga atccggatag cgggttaaat cgtcaagctg
     5101 attcagaatc gccttttttg cactttcagg aaaaccaaat gggttttcgt tcgaggctaa
     5161 tttaatgata ttttgaatcc ctaattcacg ctctagctcc tcaatcggct ttcctgcttg
     5221 gtaaggcgaa agggatttca cgccctcatt tgcgatgttg ataaattgca taataacctc
     5281 tgattattct tataaaatat aagttcggat tgtagtaaag aatgattgcc tttaccagta
     5341 aattttttgt tacaactgga aagaaattgg tacaaacatt cggattagct ttgcaaaaag
     5401 cgtaaaaaat cttaccgctt gtcatttatc agttagggaa aataaaaaat cactctctta
     5461 tataaaaaca attacgcaaa cgattgctta ttaaaaaaac ttcagtataa tgccgacatt
     5521 ttttaactct cgaggaatca ctatgaacca tttactttat tctgtcgaag acaaaccgcc
     5581 tttcgggctg agcttattgc ttgcctcaca acatttatta gccgctttag gtggcattat
     5641 cgctgtacct ttagtgctag ggaatgtact caaactctct actgcggata ctataatctt
     5701 agttaatgct gcacttttaa tttcaggcat cgtcactatt attcaatgtc gaggtattgg
     5761 cccaatcggg attagactac cgagtgtaat gggaactagc tttacgtttg ttgcagcagc
     5821 attagcgatt ggtttcagtg aaagtggcat tgccggcatt atgggagcct ctttagttgg
     5881 ctctctagtg atgattatcg gcagtttttt tatgccttat atccgtaagc tttttccacc
     5941 cgtggtaaca ggtactgtca taatgatgat tggcctaagt ttaattcctg ttgcagtaga
     6001 ctggtttgct ggtggtcagc gtactgatcc acactatgca accccagaaa atcttataat
     6061 ggctagtttt gtattaatta ttgtcgttgc tttagtacaa tgggggaaag gtattttttc
     6121 agctgctgct attgtgattg gtatgatgat aggttatatc gtttcgctag ctctgggttg
     6181 ggtaagtttt aatggcgtga aagaagcaca actttttgcg ttaccacaac ctctacattt
     6241 tggcttagaa tttccaatct ccggtatcat cggaatgtca attgcttatt tagttaccat
     6301 tgtagaatct agcggaaatt tcttagcact aggcaatgca actaaaactg aaattaccgg
     6361 aaaacactta cgtggaggtg tattatgtga tggtttaggc tcagcatttg cggcaattat
     6421 gtccacaact cccttttctt ctttctcaca aaatattggg gtcatttcat taaccggtgt
     6481 agccagtcgc tatgttgtag catttacagg cgcattactt gtactagccg gtttatttcc
     6541 tgtatttgga gcattaatcg tgtctatccc gttacctgtg cttggcggtg caggcttaat
     6601 gatgtttgcc atgattatcg cagccggtat ccaaatgtta gataatattc aacgtagcaa
     6661 acgaaacggt ttaattattg ctatctctat cggttgtggg ctggccgtaa caactcgacc
     6721 tgagctattg gataagcttc cacacttctt taaagaagtt tttggctcag gtattacggt
     6781 cggctcctta ttagcactta ttttgaattt agttttacct gaagataaaa taaccaagaa
     6841 agaaaataag agtgatgaat aaatcaccct aaaaaaacaa ggacagctca caatacaact
     6901 ttgatgctgt cctttattcc catagagagc atatttaaat ttaggttaat aaaaaaatct
     6961 gcactctata ttggtgttta cctttagagt acagatttct tcttattcta actttctagc
     7021 aaacaattag attaatgttc cgctttggta tcggctaacg aatccccaat gttattatct
     7081 ttatttggat tatcctctaa agttgaactt acatccgctg cctgttcacc acttggtgga
     7141 gtggcgttat cgtctttagt tggggtatct gtccaacctg atggttcacc caccggacgg
     7201 cgtgccatta aatcatcaat ttgcttgctg tctaaggttt cgtatttcaa taaggcatct
     7261 ttcattgcgt gtaagatgtc catattttct tccaaagttt gcttcgctcg ttgatagttg
     7321 cggtcaatga tcttacgcat ttccacatca atcaattttt gcgactcttc cgatacgccc
     7381 ttaattgcac ccattccatc ttcattttga tagaaaatcg ggcctaattc ttttgagaag
     7441 ccccattgag taaccattgc tcgtgcaatt tgggttgctc gatgaatatc agaggaagcc
     7501 cctgtggtaa ttttatcttc accaaaaatc aagccctcag caattcgccc tgcaaatagg
     7561 gtggaaagtt ggctttccaa tttggtaaat gtttcgctta cacggtcacc ttccggtaag
     7621 aattgagcaa aacctaacgc ctgaccacga ggcacaattg tcactttatt cagcggatcg
     7681 tgttccggca ttaaatagcc aacaataacg tgtccagctt cgtggtaagc agtattgatg
     7741 atctcttttt ccgtcattgt atttgaacgg cgttccggcc ccatattgat tttgtcacgg
     7801 gcttcttcga aatcttccat cattaccaca cgtttattct tacgggcagc aaataaggca
     7861 gcttcgttca ccaagtttgc taattgagca ccagagtaac ccggcgtacc acgagcaatt
     7921 tgcatcgggt caactccctc tgcaagcggt acttttttca agtgaacttt caaaatttgc
     7981 tcacgccctt tcacgttcgg caaatcgacc gtgacttggc ggtcgaaacg ccccggacga
     8041 gttaaggcat catctaacac atcggcacgg ttggttgcag cgatgataat cacaccttca
     8101 gagccttcaa agccgtccat ctcaactaac atttggttga gggtttgttc acgctcatcg
     8161 tgtccaccgc tgaaacctgc accaccacgt ttacgcccta ccgcatcaat ttcatcaata
     8221 aaaataatac aaggggcatt tttcttggct tggtcgaata aatcacgcac ccgtgaagca
     8281 cccacaccta caaacatttc cacgaagtcg gaacctgcca ttgtaaagaa tggcactcgt
     8341 gcttcacctg caatcgcttt cgccaataag gttttacccg tacccggagg gcctaccatc
     8401 aagatccctt ttggaatgcg cccacctaat ttttgaaatt tagttgggtc acgcaaaaac
     8461 tcaacaactt cgcctacttc ttctttggct tcatcacagc cggctacatc agaaaatctg
     8521 gtcttaactt cgtctgcggt caacattttg gctttatttt tcccaaagcc cattgcacca
     8581 cgtcctccgc caccttgcat ttgtcgcata taaaacacat agaaaccgat taacagcaac
     8641 attgggaacc aagaaatcaa aatttgcgag agcaagccac gacgctcagc aggctgaccg
     8701 gtaatcactg cattggtttt tgctaaatct gccattaagt actcatcata catcggcatt
     8761 acggtttggt aggttgcacc atcatttttc gtcaccaaaa tggtgtcatc attctgtttg
     8821 aaatcgaccc cttttaaacg attttcttta atatcgctta aaaaagtcga atatggcact
     8881 gtatttgagc taccactgaa attagaatta aaaccttcat aggctgtcat catcacaatg
     8941 gcaatcacca cccaaagtaa aatattttta accatatcgt tcaaggttaa tcccctatct
     9001 gctgaataaa aaactgttca agattactat aaaagcggtc gaattttcca atttttttgc
     9061 aaaatgttaa taaaaaatga ccgcttgctt gttttctagc ctttataacc tgtcgctaca
     9121 atataaactt ctcgagaccg atctcgagac gcctccggtt ttctgacttt taccacacta
     9181 aagagcgagc ggatttctcg aaggtattca tcaaatcctt cgccttggaa taccttaacc
     9241 acaaaactgc ctttggttgc taatacttgg cgacacatat ccaatgccaa ttccactaaa
     9301 tacattgcac gaggaatatc aaccgacggc ataccgctga aattgggagc catatccgac
     9361 atcaccacat tcactttgtc ttcgcctact cgctcaagta acgcattcag caccgattct
     9421 tcacggaagt cgccttgtaa gaaatccacg cctacaatcg ggttcatatc taaaatatca
     9481 caagcgatta ctctgccctt actgccgatt tgcgtcacca catattgcga ccaaccgccc
     9541 ggtgcggcac cgagatccac caccgtcatt cccggtttga ataaacggtc ggtttgttga
     9601 atttcatcta acttaaaata cgcccgtgaa cgcaattttt gtttatgtgc tttttgcaca
     9661 aattgatctt taaaatgttc tgcaagccaa cgtgatgaac tcgcacttcg ttttctaccc
     9721 atttgttctt ctatcttaat taattcaacg atttataata agggttaaat tagcaaattc
     9781 aagagatgtt ctaaaattta gctcggctta ttatgcttaa ttaatggggc tgtcctagat
     9841 aactaaccta aactaccctt aaccaattgt tttaaaaagg atatttgaga ttttaagtca
     9901 ctgtgattaa aacgccattc gcattctttc aaatacagct caaaatgcac tttgggaatg
     9961 ccgttaaact tacgcaaatg gcgttttgct tggctcccaa aattctcaat tccattaatg
    10021 tgattttgat tttcagcgaa gtgtgtgctg tgattaatgc gaaaatggtt aaattcactc
    10081 acatcaagca catcataact tcgatagaaa tcggtgtaaa caatactatc gggtttcacc
    10141 ttttcccgaa taatcggcaa aagtgtggca aattgcgtgt ttggtactac cacggtataa
    10201 acctttccgt cccgctttaa aagcccga
//
LOCUS       DANLTI010000098         9901 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.098, whole genome shotgun sequence.
ACCESSION   DANLTI010000098 DANLTI010000000
VERSION     DANLTI010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9901
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.098"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(40..729)
                     /locus_tag="PXB09_001965"
     CDS             complement(40..729)
                     /locus_tag="PXB09_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005577085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDL5234047.1"
                     /translation="MFMYLSHPLDPKDLAWPGEPVVEVTRCTDVGEETPFSSFITKLP
                     NHCGTHMDAPRHFVKDGLSINELPIEYFCHKEVALIEIPKGEAEGITKEDLLPYVDIL
                     SKVSFAFLRTGFEKYRTENPAIYQNECPYISTGAGQYLSDTFPNLKGVGIDFLALGSP
                     SSRVPDAENPKNCHRAILGYYTGRFTTVIEDMHLAELPKNANIKQFFNAPWRIKGLDS
                     SQVTCIVELQQ"
     gene            complement(741..2081)
                     /locus_tag="PXB09_001966"
     CDS             complement(741..2081)
                     /locus_tag="PXB09_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HDL5234048.1"
                     /translation="MLKKTLLFTLLLSHSLYAEDMIQENKSANITLLAEITAQGQKIN
                     GVALEYPDNVLSGSDLRQLYQVKTALDSAEKENRSVLKAYVNNEPKVTALPQAGKFVI
                     IELDTADKNAATYSVKDANKAPMKFKSKDENGNIVETEKVQAVKIPEFFANRLIYSVE
                     QKGLLKLTSGTTLGKTEWTQTAEPDKIKTPYLDDFVAKQVSLDQSGNKLNYRLYSPLQ
                     KNGEKYPLVIFLHGSGQVGSDNLAHLLSSKGAIATLPYAPSFVLAPQYDQVFDPFDNA
                     AKGQKGGIHWQTENRINLVLKMIDETLKANPQIDTTRIYINGLSRGAEGGLNLLLARP
                     NFFAGALLMSGREAYTNEWVDGNATKTNLAAIKHIPIWFFHSKEDKVSPVKGSRINYR
                     ILKDELNAPNVKYTEFTFEQAGDNGIVNNNPHNTWDAVYNSPEVIGWLLQQKRH"
     gene            complement(2143..3501)
                     /locus_tag="PXB09_001967"
     CDS             complement(2143..3501)
                     /locus_tag="PXB09_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntT protein"
                     /protein_id="HDL5234049.1"
                     /translation="MSNEMLILIGLASVVALLVIMIKGKVHPFLALGLVSIAVALTAG
                     IPMSKVIPTLISGMGSTLGSVALIVGLGAMLGKIIEKSHGADVLANWLLQRFGEKNAP
                     FALGMTGFIFGIPVFVDVGFIVLLPIIFSVARRLGGNILVYSLPIGLAMLLVHVLVPP
                     HPGIVAGAQNLNADIGFVLGIGLVAALPAYLIGQKFIPFFTKNNFVKVVTSTDLLQHQ
                     KDLIKEKGIELPSFGKVLAMISFPLILIMLGTVTATTLPKEHIVREVFSMVGSSPFAL
                     FVAVCLSAYVLGFRYGWTKHKLEEVLESALAPIAGIILITGAGGMFGKVLDASGVGKA
                     LADVLANTGLPLLVLSFILSALLRAAQGSATVATITTTTILAPAAVAAGYNDLQLALL
                     TAAIGAGSMTLSHVNDSLFWVWTKFFNVPVSVGLRTWTFLTTIFGVIAFAVVGIIWML
                     FV"
     gene            complement(3554..4330)
                     /locus_tag="PXB09_001968"
     CDS             complement(3554..4330)
                     /locus_tag="PXB09_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005547735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase family protein"
                     /protein_id="HDL5234050.1"
                     /translation="MPKFAANLTMMFNEVPFLDRFEAAANAGFKYVEYLWPYDYPAAE
                     LKAKLEQYGLKQVLFNTAAGDVAQGEWGVSAIPGREADSHRDIDLALEYALALGCENV
                     HVMAAVVPEGEDREAYKQTFIKNVQYAADKFKPHGINVLLEALSPEVKPNYLLKSQFD
                     TLEIVEAVNRDNVFVQLDYFHAQNVDGNLSRLTDKLKGKFAHIQIASVPDRHEPDEGE
                     INYQYIFNKLDEIGYEGYVGCEYKPRAETTSGLGWFEQYK"
     gene            complement(4332..4964)
                     /locus_tag="PXB09_001969"
     CDS             complement(4332..4964)
                     /locus_tag="PXB09_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDL5234051.1"
                     /translation="MTEQEQKIEMVNLARSLFERGYTVGGAGNLSVRLDENRILVTPT
                     GSSLGRLEADRLSVLDMQGNVLSGDKPSKESVFHLAMYQKNPACQAIVHLHSTYLTAL
                     SCLENLDTDNAMRAFTPYYVMRVGKLPVIPYYRPGDINIARELGERALDGKAFLLANH
                     GVVVTGSDLRDAVDNTEELEETSKLYFILQGQKVRYLTDDEVNDLKNRGK"
     gene            complement(4961..6202)
                     /locus_tag="PXB09_001970"
     CDS             complement(4961..6202)
                     /locus_tag="PXB09_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005754893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5234052.1"
                     /translation="MLGIIADDFTGASDIASFLTENGLKTVQMNGVPKTTLNSQVDAI
                     VISLKSRSNPVEEAIQQSLQALDWLKQNGCSQFYFKYCSTFDSTEKGNIGPVTDALMA
                     ALDTDFTVVTPALPVNGRTIFNGYLFVGDVLLNESGMRNHPITPMKDANLVRLMDAQS
                     QGKTGLVAYADVIQGAERVKARFAELKQQGYKYAVVDAADNSQLAVLAEAVADFQLVT
                     GGSGLGAYMAAYRSGGKKGTNAFVPSKGKTVVLSGSCSVMTNTQVAAYQQKAPSYFLE
                     AEKAIQDPNYVETLYQWVIANLDGDFAPMVYATVPPEKLKEIQTQFGGDKASHAIENT
                     FAKLAEKLQAAGVTNFITAGGETSSIVVQQLGFSGFHIGKQIAPGVPWLQAVEKPIFL
                     ALKSGNFGKEDFFSFAQEMFV"
     gene            complement(6204..7109)
                     /locus_tag="PXB09_001971"
     CDS             complement(6204..7109)
                     /locus_tag="PXB09_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5234053.1"
                     /translation="MSQKYSVAVIGLGAMGMGAAKSCIAAGLDTYGVDLNPNYLETLK
                     AAGAKKVGTSAVDFAAELDAVLLLVVNANQVNAVLFGENGLAQHLKQGTVVMVSSTIS
                     AQDAKNISQKLTDLGLVMLDAPVSGGAAKAAQGEMTVMASGSSEAFEKLKPVLDAVAG
                     KVYNIGEEVGLGATVKIIHQLLAGVHIAAGAEAMALAARAGIPLDLMYDVVTNAAGNS
                     WMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLRFPLHLASTAYSMFTEASNA
                     GYGKEDDSAVIKIFSGIELPKKEGK"
     gene            7283..8041
                     /locus_tag="PXB09_001972"
     CDS             7283..8041
                     /locus_tag="PXB09_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5234054.1"
                     /translation="MIPLERQREILRLINNNGVASINFLAEQLKVSHMTIRRDIQKLE
                     EQGKVSLVSGGVQSLERLIMELPHDDKSMLFQEQKSAIGSLASQLIPSNTTIYLDAGT
                     TTLEIAHRIIDRNDLLVVTNDFVIAHYLSNSGKCDLIHIGGSVCKENLSTTGSLAAEF
                     LKNLSIDMAFISTSSWNLKGLTTPNENKIPVKKAILEASKQNILVTDSSKYGKVATFF
                     VCPLTVFDQIICDKGLFENVRDALKGLSIKLDLG"
     gene            complement(8181..9572)
                     /gene="ffh"
                     /locus_tag="PXB09_001973"
     CDS             complement(8181..9572)
                     /gene="ffh"
                     /locus_tag="PXB09_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDL5234055.1"
                     /translation="MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVA
                     LPVVRDFINKVKERALGVEVNKSLTPGQEFLKIVQSELETAMGEANEELNLAAQPPAV
                     ILMAGLQGAGKTTSVGKLAKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFF
                     PTETSQKPVAIAEAALKHAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHAVLNPIETL
                     FTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVG
                     EKTDALEPFHPDRVASRILGMGDVMSLIEDIQRSVDQEKAEKIAAKFKKGDEFTLEDF
                     REQLIEMKKMGGMMSMLDKLPGAKNLPDHVKSQVDDKMFMKMEAIINSMTLKERANPD
                     IIKGSRRRRIALGSGTQVQDVNKLLKQFDDMQRMMKKMRKGGMAKMMRGVKGMMGGGL
                     GGLGGLGSMFGKR"
BASE COUNT         2824 a         2217 c         1985 g         2875 t
ORIGIN      
        1 atagtaaata gcctctccta aaatgaatat atctgtggtt tattgctgta attccacaat
       61 acaagtcact tgactggaat ctaacccttt aattcgccac ggtgcattaa aaaactgctt
      121 aatgttggca tttttaggga gttccgctaa gtgcatatct tcaatcacag tggtaaacct
      181 gccggtatag tagcctaaaa tcgctcgatg gcaattttta gggttttccg catcaggcac
      241 tcgggaagaa ggagacccta gtgccaagaa atcaatgcct actcctttca aattcgggaa
      301 agtatcagat aaatactgcc cggcaccggt tgaaatatag gggcattcat tttgataaat
      361 agcagggttc tcggttctat atttctcaaa ccccgttcgt aaaaaggcaa aagacacctt
      421 ggagagaata tcgacataag gcaataaatc ttctttggtg atcccttctg cctctccttt
      481 gggaatttca attaaagcga cctctttatg gcagaaatac tctatcggca attcattgat
      541 acttaaaccg tctttcacaa agtggcgagg agcgtccata tgtgtgccgc aatgattcgg
      601 tagtttcgtg ataaaactgc taaatggcgt ttcttcacct acgtctgtgc agcgagtcac
      661 ctcaacaaca ggttctcccg gccaagctaa atctttagga tctaacgggt gagacaaata
      721 cataaacaca gtgagcctcc ttagtggcgt ttttgctgaa gtaaccaccc aatcacctca
      781 gggctgttat acacagcgtc ccaagtatta tgagggttat tattgacaat gccgttgtcg
      841 ccggcttgtt caaaagtgaa ttcggtatat ttcacattgg gggcatttaa ctcatctttg
      901 agaatgcggt agttaatgcg agaacctttt accggcgaga ctttgtcctc tttactatgg
      961 aaaaaccaaa tcggtatatg tttaattgcc gccaaattcg ttttggtggc attgccgtcc
     1021 acccattcgt tggtgtaggc ttcacgaccg ctcattaata atgctccggc aaagaaattc
     1081 gggcgagcca acaacagatt taagccccct tcagcacctc gagataagcc attgatataa
     1141 atgcgtgtgg tatcaatttg aggattggct tttagggttt catcaatcat ttttaacacg
     1201 agattgatac gattttccgt ttgccagtga ataccgcctt tttgcccttt ggcggcatta
     1261 tcaaatgggt cgaatacttg gtcgtattgc ggagcaagta caaaacttgg ggcataaggc
     1321 agggtggcaa tcgccccttt actggaaagc aggtgagcaa ggttatccga accgacttgc
     1381 cctgaaccgt gtaggaaaat cacaagcggg tatttttcac catttttttg caaaggcgaa
     1441 tagagacggt agttcagttt atttccagac tggtctaagc tcacttgttt tgcgacaaaa
     1501 tcatcgagat aaggggtttt gattttgtcg ggttcagcgg tttgtgtcca ttcagtcttg
     1561 cctagagttg tgccgctggt taatttaagc aagccttttt gttccaccga atagattagg
     1621 cgatttgcaa aaaactctgg aattttgacc gcttgtactt tctctgtttc tacaatgttg
     1681 ccgttttcat ctttggattt aaatttcatc ggcgctttat tagcatcttt tacgctataa
     1741 gttgccgcat ttttatctgc cgtatccaat tcaataatca caaatttacc ggcttgcgga
     1801 agtgcggtca cttttggctc attattgaca taggctttga gcaccgaacg gttttctttc
     1861 tccgcactat ctaatgccgt tttgacctga tacagttggc gaagatcgct gcctgataag
     1921 acattatcag gatattccaa tgccacgccg ttaatttttt gaccttgagc ggtgatttcg
     1981 gcaagcaacg taatattcgc tgatttattt tcctgaatca tatcctctgc atagagggag
     2041 tgagaaagta atagcgtaaa taaaagtgtt tttttcagca taggtttctc ctaaaaaaat
     2101 ccacctcata agaggtggat tttaagcagt aacagagtga tattaaacga ataacatcca
     2161 aataatgcca acaacggcaa aggctattac accgaaaata gtcgttaaaa acgtccaagt
     2221 tcttaagcct acggatacag gaacattgaa gaatttcgtc catacccaga agagtgaatc
     2281 attcacgtgg gataatgtca tagaacctgc accaatagct gcagtaagaa gtgctaattg
     2341 cagatcatta taacctgctg ctacagctgc aggagctaga atagttgtag tagtaatagt
     2401 tgccaccgtt gcagaacctt gtgctgcacg caataatgca gaaagtatga aagaaagaac
     2461 caataacggt aagcccgtgt tggctaatac atctgctaat gctttaccta cgccactggc
     2521 atctaacact ttaccgaaca taccgcctgc accggtgatt aaaataatcc ccgcaatcgg
     2581 tgctaacgca gactccagta cttcttctaa tttatgctta gtccaaccgt atctaaaacc
     2641 taatacataa gcagaaagac aaacagccac aaataaggca aacggagagc ttcctaccat
     2701 actgaatact tcacgcacga tatgttcttt cggcaaggtt gttgccgtta ctgtacctaa
     2761 cataatcagg attagcggga aagaaatcat tgctaacact ttaccaaaag aaggtagttc
     2821 aatgcctttc tctttaatca aatctttttg gtgctgtaaa agatcggttg aagttactac
     2881 ttttacgaaa ttattttttg taaagaacgg aataaatttt tgaccgatta aatatgcagg
     2941 tagcgctgct actaagccaa ttcccaatac aaagccaata tctgcgttta agttttgagc
     3001 acccgctaca atacctggat gaggtggaac taaaacgtga acaagtaaca tcgcaagccc
     3061 gattggcaaa gaataaacaa ggatatttcc ccctaaacgt ctcgctacac taaaaataat
     3121 cgggagcaat acgataaaac caacatcaac gaaaacagga ataccgaata taaaacctgt
     3181 catacctaat gcaaagggag cgtttttctc accaaaacgc tgtaacaacc aatttgctaa
     3241 tacatccgca ccgtgagatt tttcaatgat tttccctaac attgctccca aacctactat
     3301 gagtgcaacg ctacctaaag tacttcccat acctgaaatc aaggttggga tcactttact
     3361 cattggaata cctgcagtta aggcaactgc gatactcact aaccccaatg ctaagaatgg
     3421 gtgtacttta cctttaatca taatgaccag aagagcaact acgcttgcta atccaatcaa
     3481 aattaacatt tcatttgaca taaagtttcc ttctaaatgt tgtattcacg tatttatccg
     3541 ctaatcatcg tggttattta tactgctcaa accaacctag tcctgaggtg gtttccgctc
     3601 gtggtttata ctcgcaacct acatagcctt catacccgat ttcatcgagt ttgttgaaga
     3661 tatattggta gttaatttcc ccttcgtccg gttcgtggcg atctggcaca gaggcaattt
     3721 gaatgtgggc aaatttaccc ttgagtttgt cggttaggcg agataagttg ccgtccacat
     3781 tctgtgcgtg gaagtagtca agctgtacaa acacattgtc tcggtttacc gcttccacaa
     3841 tttctagcgt atcaaactgg cttttaagca gataattcgg tttcacttca gggcttaggg
     3901 cttcaagcaa gacgttaatg ccgtgcggtt tgaatttatc ggcggcatat tgcacgtttt
     3961 tgataaaggt ttgtttatag gcttcacgat cttcgccttc tggcacgacc gctgccataa
     4021 cgtgaacatt ctcacaacct aaggcgaggg catattccaa cgctaaatca atatcacgat
     4081 ggctatcagc ttcacgcccc ggaatggcag aaacacccca ttcaccttga gcaacatctc
     4141 cggctgcggt attgaacaac acctgtttta agccatattg ctcaagtttg gctttcaatt
     4201 ctgctgccgg ataatcataa ggccataaat actcgacata tttaaatcca gcgttggcag
     4261 ccgcttcaaa acgatctaaa aacggcactt cgttaaacat catcgtaagg tttgctgcaa
     4321 atttaggcat tttattttcc tctgtttttc agatcattga cttcgtcatc ggtgagataa
     4381 cggacttttt gaccttgtag aataaaatag agcttggagg tttcttccaa ctcttctgtg
     4441 ttatccaccg catcacgcaa gtctgaacct gtgactacca ccccgtgatt tgccagtaaa
     4501 aaggctttgc cgtctaaggc tcgttccccc agctctcggg caatgttgat gtcgcccgga
     4561 cggtagtaag gaatgaccgg caattttcct acccgcatca catagtaagg ggtgaaagca
     4621 cgcatagcgt tgtcggtatc caaattttcc aagcaagaaa gtgcggttaa ataagtggaa
     4681 tgcagatgca ctattgcttg gcaagccgga tttttctgat acatcgccaa gtggaatacc
     4741 gattcttttg aaggtttatc tcctgaaaga acattaccct gcatatccaa tacggaaagg
     4801 cggtctgcct ctaaacgccc gagcgaagag ccggttgggg taactaaaat gcgattttca
     4861 tctaaacgca cggagaggtt gcccgcaccg ccaacggtat agccccgctc aaacagcgag
     4921 cgggcaagat tgaccatttc aatcttttgt tcttgttctg tcatacaaac atctcctgag
     4981 caaaactgaa gaaatcttct ttaccgaagt tacccgattt caatgcaaga aaaatcggtt
     5041 tttcgaccgc ttgtaaccac ggcacgcccg gtgcaatttg tttgccgatg tggaaaccgc
     5101 tgaatccaag ttgctgaacc acaatgctcg aagtttcacc gcctgcggta ataaagttag
     5161 ttacgcctgc ggcttgtaat ttttcggcta atttggcaaa ggtattttca atggcgtggc
     5221 tggctttatc gccgccgaat tgggtttgaa tctctttcaa tttttcaggg ggaacggtgg
     5281 cataaaccat tggggcaaag tcaccgtcta ggtttgcaat cacccattga taaagcgttt
     5341 ctacatagtt cggatcctga atggcttttt ccgcttctaa gaaataactt ggggcttttt
     5401 gctggtaagc cgccacttgg gtattggtca ttaccgagca agaacccgaa agcacaacgg
     5461 ttttgccttt gcttggtaca aacgcattcg tgcctttttt gccgcctgaa cggtaagccg
     5521 ccatataagc ccctaagcct gaaccgcctg tgactaattg aaaatcggca accgcttcgg
     5581 caagcaccgc aagttgtgaa ttatcggcag catctactac cgcatatttg tagccttgct
     5641 gtttcaattc agcaaaacgg gctttcacac gctctgcccc ttgaatcaca tcagcatagg
     5701 caaccaagcc ggttttgcct tgagattgtg catccattaa acgcaccaag ttggcatctt
     5761 tcatcggggt aatcgggtgg ttacgcatac cagattcatt cagtagcaca tcgcccacaa
     5821 acaaatagcc gttgaaaatg gttctgccat tgacaggcag agccggtgtg actacggtaa
     5881 aatcggtatc taatgccgcc attagggcat cggttaccgg cccgatattg cctttctccg
     5941 tgctgtcaaa agtggaacaa tatttaaagt agaattgcga gcaaccattt tgtttcagcc
     6001 aatctaaggc ttgtaatgat tgttggattg cttcttccac agggttagag cgagatttca
     6061 ggctaatcac aatcgcatca acttgactgt taagtgtagt tttcggcaca ccattcattt
     6121 gcaccgtttt tagcccgttt tcggttaaga aactggcgat gtcactcgca ccggtgaaat
     6181 cgtctgcaat aatgcctaac atcttatttc ccctcttttt taggtaattc gataccactg
     6241 aaaattttaa tgaccgcact atcatcttcc ttgccgtaac ctgcgttgct ggcttcggta
     6301 aacatagaat aagcggtgct ggctaagtga agcgggaaac gcaaagattt tgcggtgtcg
     6361 ttcaccaatc ccaaatcttt cacaaaaata tccaccatag agagtggggt gtaatcgccc
     6421 tcaacaacgt gtttcattcg gttttcaaac atccaagaat tgcctgccgc attggttaca
     6481 acgtcataca ttaaatcaag cggaataccg gcacgagccg ccaatgccat tgcttctgca
     6541 cctgcggcaa tatgcacacc ggcaagtaat tgatggataa tttttaccgt tgcacccaag
     6601 ccgacttctt cgccaatgtt atacactttg cctgcaaccg catctaatac cggttttaat
     6661 ttctcgaatg cctcgctgga acctgatgcc atcacagtca tttcaccttg tgctgctttt
     6721 gctgccccac ccgaaaccgg agcatctaac atcaccaagc ctaaatctgt taacttctgt
     6781 gaaatatttt ttgcatcttg tgcagaaatg gtggaagata ccatcaccac cgtaccttgt
     6841 ttcaaatgtt gggctaagcc gttttcaccg aataacaccg cattcacttg gttggcatta
     6901 accaccaaca acaacaccgc atctaattca gcggcaaaat cgaccgcact tgtgccgact
     6961 ttcttagcac ctgctgcttt taaggtttcc agataattcg ggttaagatc cacaccgtat
     7021 gtgtctaatc cggcagcgat acaagatttt gctgctccca tacccattgc tcctaagccg
     7081 atgacggcta cgctatattt ttgactcatt gtttattccc tcaaataaat taatgaactt
     7141 gatggcggta tattaaccaa tagaaaagat aaaatctgtg atgaagatca caaatattaa
     7201 caataaatgt gaatttttgt gattttaatt ttggaaacta aatctgatat aatctctttt
     7261 aacaattaaa ataggttaaa aaatgatccc cttagagaga caacgagaaa tactacgact
     7321 tattaataat aatggtgtcg caagtattaa ttttctggca gaacagctaa aagtatcaca
     7381 tatgacaatt cgccgtgata ttcaaaagct ggaagagcaa ggtaaggtat ccctagtatc
     7441 tggtggagtt caatctcttg aacgattaat catggaatta ccacacgatg ataaatcaat
     7501 gttattccaa gagcagaaat cagctatagg atctttagca tcacagctaa ttccctcaaa
     7561 cacaactatt tatcttgatg ctggaactac tacattagaa atagctcatc ggataatcga
     7621 tagaaatgac ttactagttg taacaaacga ttttgttatt gctcactatc ttagtaattc
     7681 aggaaaatgt gatttaattc atataggagg aagtgtctgt aaagaaaacc tatcgacaac
     7741 tggttcactt gcagcagaat ttctgaaaaa cctatcaatc gatatggcat ttatatctac
     7801 ttcatcctgg aatttaaaag gtctaacaac gccgaacgaa aataaaatcc ccgttaaaaa
     7861 agcaatttta gaggcatcca agcaaaacat tttagtgaca gactcttcaa aatatggaaa
     7921 agtcgcaact ttttttgttt gccctcttac tgtatttgac cagattattt gtgataaagg
     7981 attatttgag aatgtacgag acgcactgaa agggctaagt attaaattag atttaggata
     8041 atcttcttac caattttttc tgagaacgac aagcaatcaa aaagtattat ttttgcaaat
     8101 aagatattaa tagggaaagt taacaatcct agcaacggat tgttaactga ttttcggctg
     8161 gtactaataa aataggaata ttaacgttta ccaaacatac tgcctaagcc accgagaccg
     8221 cctagaccac cacccatcat acctttaaca ccacgcatca tttttgccat tccgccttta
     8281 cgcatttttt tcatcatacg ttgcatatca tcaaactgct tgagcagctt atttacatct
     8341 tgcacctgtg tgccggagcc aagtgcgata cggcggcggc gtgagccttt aataatatcc
     8401 ggatttgccc gctcttttaa ggtcatagaa ttgatgatgg cttccatttt catgaacatt
     8461 ttatcatcaa cctgactttt aacgtggtca ggcaggtttt tcgcccccgg tagtttatcg
     8521 agcatcgaca tcattccacc catttttttc atttcgataa gctgctcacg gaaatcttcc
     8581 aaggtaaatt catcgccttt tttgaatttg gcggcaattt tttccgcttt ttcttgatca
     8641 accgagcgtt gaatatcttc aattaaagac attacatcgc ccatacctaa aatgcgggaa
     8701 gccacacggt cagggtggaa cggctcaagg gcatcagttt tttcacccac acctaagaat
     8761 ttaatcggtt taccggtgat ttggcgaata gaaagtgccg caccgcctcg ggcatcgcca
     8821 tcgactttgg taagaataac accggtaagc ggcaacgctt cgttaaaggc ttttgcggtg
     8881 ttggcggcgt cttgaccggt catcgcatca accgtaaata gcgtttcaat cggattcagc
     8941 acagcgtgga tttgttggat ctcttccatc atttcgccat caacgtgtaa acgaccggca
     9001 gtatccacaa tcaatacatc aaagaaatta agcttagcgt gcttcagtgc cgcttctgca
     9061 atcgctaccg gtttttggct ggtttcggtc gggaagaagt ccacttttaa cgcttcagca
     9121 agggtctgta gctgcttgat agcggcaggg cggtaaacat cggcagaaac taccaacacc
     9181 tttttcttgt ggcgttcttt caggaatttt gccaatttgc cgacagaggt ggttttaccc
     9241 gcaccttgca aacctgccat taaaattacc gcaggcggtt gggccgcaag attcagctcc
     9301 tcgttggctt ctcccattgc cgtttctaat tcgctttgta cgatttttaa gaactcttgc
     9361 cccggcgtga ggcttttgtt tacctcaacc cctaacgcac gctctttgac cttgttgatg
     9421 aaatcacgca caacagggag ggcaacatcc gcctccaaca atgccatacg aacttcacgc
     9481 agggtatctt taatattatc ttccgttagg cgacctttgc ccgtaatgtt acgcagcgtt
     9541 ttagacagtc tgtcagagag gttttcaaac atatcagctt tctcaatttg caaaatttta
     9601 ggaaaaaagt accgcttgtg agcggaaagt tgccgccatt atacaaaaaa aagcgttacg
     9661 gttataggga aataaaaaaa cggcatagcg attaaactat gccgtaaaat ttgacgatat
     9721 tcgaggaatc attatttagt tatattgtgc gatcataata ctccgaattg cgtataaaag
     9781 tgaagtgata ttttcaaatt tatgttagaa atgagaggta aattacaaaa ttaaagggga
     9841 tattattgtt tgaaaaaata agagcgaaaa gaaaaccctg atgattgctc atcagggctt
     9901 c
//
LOCUS       DANLTI010000099         9865 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.099, whole genome shotgun sequence.
ACCESSION   DANLTI010000099 DANLTI010000000
VERSION     DANLTI010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9865
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.099"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            171..1877
                     /locus_tag="PXB09_001974"
     CDS             171..1877
                     /locus_tag="PXB09_001974"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDL5234056.1"
                     /translation="MNTSSFNRTWAKVILSALMRYGVKHFCIAPGSRSTPLTLAAVQL
                     QQTQYAECHTHFDERGLGFYALGIAKATDSPVAIIVTSGTAVANLYPAVIEASLSHQK
                     LIILSADRPTELIGCGVNQAIHQQGIFANYPVASVNLPKANEAYHASWLVSTIEQACT
                     TQAQQGGVLHINVPFEEPLYEADINEILNTPWLRPIQGWLNNAQTKWIDQQAIQSEVS
                     MHENWDYWRTKRGVIVVGKLPPEQGTGLKTWAETMGWCLLSDVQSCIEASLPYADIWL
                     SNETVKQRLLQADIVIQFGTQIVSKRVNEFLKAFQGEYWVVEQSHDYHNPNAHHQTRF
                     IAKAHHFLRVHPPLRQKPWLLEPLALSQFCSTFIEQQVGGSLSEASLAHNIQDVLAIN
                     GNLFIGNSLFVRLVDALCKLPEGYPVYTNRGASGIDGLIATMAGIAKGSDRPTVGVVG
                     DISALHDLNSIALLTKINQPTILFVVNNSGGALFDMLPVDSKAKDQYYRLAHNFEFAQ
                     VATMFGLEYIRPFTWADLKTKLKHAYARKGVTIVEIKVNEHDGSNMYKSLLKQISQAE
                     IA"
     gene            1926..2765
                     /gene="menH"
                     /locus_tag="PXB09_001975"
     CDS             1926..2765
                     /gene="menH"
                     /locus_tag="PXB09_001975"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDL5234057.1"
                     /translation="MLSYQWHAQQGTPVVFLHGLLGSQQDWQAVLQHLQNFPQIRPLT
                     IDLPFHGNSKHITCADFANLRQQLHATLESLIGSRPFYLVGYSLGGRAALDYVLNMEN
                     PNLQGVVLEGANIGLSTENDRQIRRQNDRHWANRFRQEPIEQVLEDWYKQPVFADLSD
                     TERECYIDSRKHNQGEQIAQMLEATSLAKQPDYTEKLKQTDKNIVFFIGEKDQKFRKM
                     ASSHQLPTQLIANAGHNAHRANAKNFVEKLGLLILHSDSDLRSQSVKHNGAALLHKSP
                     SGA"
     gene            complement(2814..3491)
                     /locus_tag="PXB09_001976"
                     /pseudo
     CDS             complement(2814..3491)
                     /locus_tag="PXB09_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251475.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            3577..4239
                     /locus_tag="PXB09_001977"
     CDS             3577..4239
                     /locus_tag="PXB09_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HDL5234058.1"
                     /translation="MRKTHSFQQVRKIKPTWMSVSGHIPFRNGVSIPYESTLERDFLM
                     YFTYLPSVDEVVSQPTTLPFVKNGITYTYTPDFFLSFTDGRKPMLIEVKPKAKWQKHW
                     KEWKEKWKAAIRFCQENGYVFHVYDEDRIRHLALFNLNYVQRYKRIQHEQEDIDAILA
                     QVKLMGNTTIDYLLSRFFAGSLYRMKGLQIIYHLLATKQLHCNWFLPLNEFTEVWGNN
                     DE"
     gene            4229..6157
                     /locus_tag="PXB09_001978"
     CDS             4229..6157
                     /locus_tag="PXB09_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDL5234059.1"
                     /translation="MMSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYM
                     DEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSVDVTAISNEYWEKAQQKYEAIK
                     PLLGMDQHRPYAVKARAEDVGVNPRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLT
                     PEQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEE
                     RLRKRGQREKARNKFKPKPNSFPDADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLT
                     VAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGLQGSEWNAFGYPVK
                     VHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTF
                     SNIKERDSYDSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDE
                     NEVGCGYPQLPVDEQTLLLDFLPSITRTIQHNGVTIDGLRYYDVALNMYISDSDESGK
                     SKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIANKGDKY
                     INEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVV
                     TSNLLALDDESLSFGEVD"
     gene            6157..7044
                     /locus_tag="PXB09_001979"
     CDS             6157..7044
                     /locus_tag="PXB09_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HDL5234060.1"
                     /translation="MQYEHVHEKFRHLVTADNQERIAFLDEPRWLGYGVAKDIMDNLV
                     SLMNKPKRPRMLNLLIVGDSNNGKTTLIRRFFDLYGQAYIDSDSNAIYPILLAEAPPS
                     ANEKELYISLLERFYVPYKPTDTIAKLRYQTIHLFREFRVKMLVIDEFHSLLVGTPRL
                     QRQVMNAIKMLCNELQIPIVGVGTRDAIRVLHTDRQHASRFDVAELPIWKLDKEFQKL
                     LFQFQGILPLRESSNLQSPELATKIHTISGGNLGNVHRLLTACAVQAITSGTEKITLD
                     IIEKNSWVQPTNGYRKIIG"
     gene            7002..8108
                     /locus_tag="PXB09_001980"
     CDS             7002..8108
                     /locus_tag="PXB09_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HDL5234061.1"
                     /translation="MGTTNKRLSQNNRIKKGVIHTPIYSNESISSWLIRASFDCGTDP
                     LTFTGFYWEKHRLWTLDLDRGLENIEPTIYDDVQALSGKIQLSEYSLFRRLYPINADE
                     TLAKGQVRWVIPRSARNRTHHIGQQYCPLCLDESPHLRNDWRLAWNFGCLKHNMMLAN
                     RCFCCGTLYQPHLLSAEKRHLNHCHQCGGKLEQGTMEMSLAEKLTLQGINQVLEKDSG
                     ICFGYKVSGKVWFDMLRYCINLLRRASDRPNHALAKFVVNLQIDVENICSPKTGLSFE
                     QLPLGERTNLLVNAYHILGMEADSIRSAIYLCGGTQKTFMFEKYPDFWQEFMALAPAG
                     PNRTRKRTKPQNESITAINRRWERLKRKLHLNNE"
     gene            8105..9529
                     /locus_tag="PXB09_001981"
     CDS             8105..9529
                     /locus_tag="PXB09_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234062.1"
                     /translation="MKINVIKPQEEPCSACGKISRIWRRYNGEGYCANCYAKWFPKKE
                     CSCCHQPKRIYLSSTVCWDCEKQTDCVRCGKAAGTFKIGKITRYGAVCNVCSRYFREE
                     RECFECGQLSRTMLRASESGHSELLCLKCFQKYRFATCKNCRRYRKVHDRDNQLCRKC
                     SEQRTSQCPKCKQDMPAGYGNICADCSRRTLLFNLIRMNVHLFRHKKVKRAYKKFIFW
                     YLAKCGVSVVLKKSDDHVLFFMRCDENWGNIPDYRELVTFFKPNGLRTHLTVLRWLLD
                     TNQVKVDESLKEEMAGLERIQSLFNKLSNSVPCIANYYTQLQHKYEAGKTSLKSVRLA
                     LQPAIDFISSESVSLLPTQVQLNSYLVAKTGQIAAITGFINHLNREYHCELEIDRSLI
                     QKMKEKQLKQQAKQRLAILYKQEKLSIKEQNELLSVVLLNLHNIWIKSPKKLSISEID
                     GIAYYVDNEKKYFIPKDIHIRLME"
     gene            9644..9850
                     /locus_tag="PXB09_001982"
     CDS             9644..9850
                     /locus_tag="PXB09_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HDL5234063.1"
                     /translation="MTLKAQFREWLKKEQEHDEMIGFAHIPCILSKVDSKLAIVSGNA
                     YEKKYLRYWIKCFRFDRNISKYIK"
BASE COUNT         3051 a         1989 c         2127 g         2698 t
ORIGIN      
        1 gctcttaaaa aagagagagt ttactaagta aagtgttgct caatagatag aaattttcac
       61 gaagttttac aaaaacattc caattttctc ctaaaaaact tcccacaata atttcacttt
      121 ttgctacaat cctaaccatt tatcgaattt atcaatcagt agagaagaat atgaatacca
      181 gttcttttaa tcgcacttgg gcaaaagtga ttttaagtgc attaatgcgt tatggcgtaa
      241 aacatttttg tattgctccg ggttctcgct caacaccgct cacattagcg gcagtgcaac
      301 ttcaacaaac gcaatatgca gagtgccaca ctcattttga tgagcgtggt ttaggttttt
      361 atgcgttagg gattgctaaa gcaaccgaca gcccggttgc tattattgtc acttccggca
      421 cagcagtagc gaacctttat cctgcggtga tagaggcaag cctgagccac caaaaactga
      481 ttattctttc tgccgaccgc ccaaccgaat taatcggctg tggggtaaac caagccattc
      541 atcagcaagg tatttttgcc aattacccgg ttgccagtgt caatctaccg aaagcgaacg
      601 aggcttacca cgcaagctgg ctggtttcga ccattgagca agcctgcact acccaagcac
      661 aacaaggcgg tgtgttgcat atcaatgtgc cttttgaaga gccgctttac gaagcagaca
      721 ttaatgaaat tctaaataca ccttggttac gcccaatcca aggctggttg aataacgctc
      781 aaaccaaatg gatagaccaa caagcgattc aaagcgaagt ctcaatgcac gaaaattggg
      841 attactggcg aactaaacga ggggtgattg tggtcggcaa actgccgccg gaacaaggca
      901 caggtttaaa aacttgggcg gaaaccatgg gttggtgctt gctaagtgat gtgcaatctt
      961 gcattgaagc cagcctgccg tatgccgata tttggctctc caacgagact gtcaaacagc
     1021 gtttattgca agcggatatc gtgattcaat tcggcacgca aattgtcagc aaacgggtga
     1081 atgaattttt aaaagcattc caaggggaat attgggtggt ggaacaatcg cacgattacc
     1141 ataatccaaa cgctcatcat caaacccgtt ttattgccaa agcacatcac tttttgcggg
     1201 tacacccacc acttcgccaa aagccatggt tgcttgagcc attggcatta tcgcaattct
     1261 gctccacttt catagagcaa caagtgggtg gcagcttaag tgaagcctca cttgcacaca
     1321 acattcaaga tgttttagca attaatggca acttatttat cggcaatagc ttatttgttc
     1381 gattggttga tgctctgtgc aaactgccgg aaggctaccc tgtttacacc aaccgtggtg
     1441 caagcggtat tgatggctta atcgcaacaa tggcaggcat tgcaaaaggt agcgaccgcc
     1501 cgactgtcgg tgtggtaggt gatatttccg cattacacga tcttaactca attgcattgc
     1561 tcaccaaaat taaccagccg accattttat ttgtggtgaa taacagcggt ggtgcgttgt
     1621 ttgatatgtt gcctgttgat agcaaagcga aagatcaata ttaccgcctt gctcacaact
     1681 ttgaatttgc tcaagtcgcc acaatgttcg ggcttgaata tatccgcccg tttacttggg
     1741 cagatctaaa aaccaaactc aaacacgcct atgctcgtaa aggtgttacc attgtggaaa
     1801 tcaaagtaaa tgaacacgac ggcagcaata tgtataaatc attgctaaaa caaatttcac
     1861 aggcggaaat tgcctaatca caactgcccc tcgccaatcc tgcgaggggt aaaaatgtat
     1921 cgactatgct ttcctatcaa tggcacgctc aacaaggcac acccgtggtt ttccttcacg
     1981 gcttgctcgg ctcacaacaa gactggcaag ctgttctcca acatttgcaa aattttccgc
     2041 aaattcgacc gcttaccatt gaccttcctt ttcacggaaa tagtaagcac attacctgtg
     2101 ccgattttgc caacctgcga caacaactac acgccaccct tgaaagccta atcggctcac
     2161 gacctttcta tttagtcggc tactcactcg gtggacgagc ggcactcgat tatgtgttaa
     2221 atatggagaa tccgaatctg cagggcgtgg tgttagaagg ggcgaatatc ggcttaagca
     2281 cagaaaacga ccgccagatt cgccggcaaa atgaccgcca ttgggcaaac cgtttccgtc
     2341 aagaacccat cgaacaagtg cttgaagatt ggtacaaaca gcctgttttt gcggatttaa
     2401 gcgatacgga aagagaatgt tatattgata gcagaaagca caatcaagga gagcaaattg
     2461 ctcaaatgct ggaagccacc agcctcgcca aacagcctga ctacaccgaa aaactcaagc
     2521 agacggataa gaatattgtc ttttttatcg gtgaaaagga tcagaaattt cgcaaaatgg
     2581 catcaagcca ccaactacca acacaactga ttgctaatgc agggcataac gctcatcggg
     2641 ctaatgctaa aaattttgtg gagaaattgg ggttattgat actccactcc gacagcgacc
     2701 tacggtcgca atcggttaag cataacggtg cagctctgct gcacaaaagc cccagtgggg
     2761 cttaatcagc cgtaggctaa atataaccta gtacggctca gccgtgctag gtgttagggc
     2821 tccccctgca accgttgcaa taagcgatcc atcgcccgat aaccaagtgc ttccgctaaa
     2881 tgcagttgtt gaatattcgc ctcgccggct aaatcagcaa tagtccgaga aactttcaaa
     2941 atacggtggt aggctcgtac cgataaaccg agctttgtca atgcagtttc taaaaatagg
     3001 gcatcttgtg ccgataattg gcaatctcgc tcaatttctc gggtggtgag ttgagaattg
     3061 attttacctg ctcgctcaaa ttgcattttt ctggctaaaa acactcgctt gcgaacctgc
     3121 tcggtggtct ctcctcgatt ctccgtccca ctttgcaatg ctccttgtgg caaaagtggc
     3181 acttctatag agagatcgaa acggtctaag aaaggtccgg aaaggcggtt taaataccgc
     3241 attacctgtt ggggcgaagt gcggttatgc gtgccttgat aatgccctgt cgggcttggg
     3301 ttcatcgctg caattaattg aaagcgtgcc ggaaattgta ctttagcgtt ggctcgggaa
     3361 atcacaattt cgcctgcctc caacggctga cgtaacgcat caagcacttt acgttcaaat
     3421 tcaggcaatt catctaagaa cagcacaccg ttatgggcaa gtgaaatttc ccccggtttg
     3481 gggatcgagc cactgtaaaa actagaaata aatgtcataa aaactagaaa tagctgtcag
     3541 attatttaga aaacaagaaa taggtgtcaa attattatga gaaaaacaca tagttttcaa
     3601 caggttagaa aaattaaacc cacttggatg agtgtatcgg ggcatattcc atttagaaac
     3661 ggagtcagta ttccctatga atcgacttta gagcgtgatt ttttgatgta tttcacttat
     3721 ctaccttcag tagatgaagt cgtctctcaa ccgactaccc tacctttcgt caagaatggg
     3781 atcacttata cctatacacc agatttcttc ttgtcattta cagacggtcg aaagccgatg
     3841 ttaatcgagg tcaaaccgaa agcaaaatgg cagaagcact ggaaagaatg gaaagaaaaa
     3901 tggaaagctg caatacgttt ttgccaagaa aacggttatg tattccatgt gtatgatgaa
     3961 gatcggattc gacatctagc gcttttcaat ctcaactatg ttcagcgcta taagcgaata
     4021 caacatgaac aagaagatat agatgctatt ctagcccaag taaagctgat gggaaatacc
     4081 actattgact atttactctc tcgatttttt gcaggttctc tatatcgcat gaaaggccta
     4141 caaatcatct atcacttact ggcaacgaaa caactacatt gcaattggtt tctaccactt
     4201 aatgaattta ccgaggtatg ggggaataat gatgagtaac tctggattta cagaaaagcg
     4261 ctatcatcac cgattagatc ggggacgtat tattttgcaa aaaggtaata tttacctaaa
     4321 tagagaagat ggagaacagt atgaattggt tgattatatg gatgaaccct cccaactgct
     4381 cgtacgaaat ctcaacactc gtacaaccaa agtcgtcagt attcatcagc ttgaaaattt
     4441 caaaatgaac gagcgaacgg atctttctgt ggatgtaacc gctattagta atgaatattg
     4501 ggagaaagcc caacaaaaat atgaggcaat taaaccgtta ttagggatgg atcaacatcg
     4561 gccttacgca gttaaggctc gtgcagaaga tgttggggtg aaccctcgta cattataccg
     4621 ttggttacaa gcctataatt ccataggatc tatcgcaggt ttagtcgatc aaaaacgtgg
     4681 atggcaacaa ggaaattccc gtttaacgcc agagcaagac aagctgatcg tgcaggtaat
     4741 caatgagttt tacctacata aacaacgccc aactactgag caaactatta gagaaattcg
     4801 ccgccgatgc aaaattgaaa aagtggaaag cccaagcaaa gaaaccatcc gtatgcgcat
     4861 tttgcatatt tcagaggaag agcgattacg gaaacgcggg caacgagaaa aggcacgcaa
     4921 caaatttaag ccgaagccaa atagctttcc tgatgcggat tatccattga gtgtggtaca
     4981 aattgaccat acaccagttg acctaattat tgtggatagt aagtatcgta aaccgattgg
     5041 ccgaccgttt ttgacggttg cgatagatat atacagcaga atgattgttg gttattacct
     5101 ttcacttgat gcgccttctg taacttcggt ggcgatgtgt attgcacgtg gtattttgcc
     5161 gaaagaacgc ctactgcttg atttaggttt gcaaggctca gaatggaatg cttttggcta
     5221 cccagtgaaa gtgcatgtgg ataatggccc agattttcag gctttggatt tatctaaatc
     5281 ttgttctgca cacggaatcc atcttgaatt tagaccgatg gggcgacctg aatatggcgg
     5341 acatattgag cgtgttatcg gtacatttat gaaagaagtt cacagtttag caggaacaac
     5401 attctccaac atcaaagagc gtgactctta cgattcggaa aaagaggcca ttatgactct
     5461 cgatgagttt gaaaaatggt tggtacatta cattgtgaat gtttaccaca aacgtgtgca
     5521 ttctgcttta ggcatttctc ctgaacaaaa atggaagatt ggtatttttg gagatgaaaa
     5581 tgaagtggga tgtggttatc cgcaacttcc tgttgatgaa caaacactac tacttgattt
     5641 cttgccaagt atcactcgta ccattcagca taatggtgta acaattgacg gacttcgtta
     5701 ttacgatgtt gcgctaaata tgtatatcag tgattcagat gaaagcggta aatctaagga
     5761 atttctgttt cgccgagacc cgcgaaatat cagcaaaatt tggttttatg atccgaaatt
     5821 aaaacgttac ttcccaattc catttgcaaa tcaggcaatg cccgaaatga gcatttggga
     5881 atatagagag gttcgtagcc gaattgcgaa taaaggtgat aaatatatca acgagcaaca
     5941 agttttagac ggtttaaccg agatgcgtga aatggttgct gaatcggctc aacggacgaa
     6001 aaaagcacgc cgtcaggctg aacgacaaaa aatgcacaaa gcaagtaagc caattattga
     6061 aacaaaagtg gaaactaagg ctgttgtacc agtcgtagta acatcgaatt tgcttgcttt
     6121 agatgatgag agcttatctt ttggtgaggt ggactaatgc aatacgaaca tgttcatgaa
     6181 aaattccgcc atcttgtgac agcggacaat caggagagga ttgcgttctt ggacgagcca
     6241 agatggttag gttatggtgt cgccaaagac attatggata atttggtttc tttaatgaat
     6301 aaaccaaaac gcccacgaat gttgaatttg ttgattgtcg gcgattccaa taatggaaaa
     6361 accacactga tccgccgctt cttcgacttg tacggtcagg cgtatatcga cagtgattct
     6421 aatgcgattt accctattct tcttgccgaa gccccaccaa gtgcgaatga aaaagaattg
     6481 tacatctcat tattagagcg gttctacgta ccatataagc cgacagatac gatagccaaa
     6541 cttcgttatc agactatcca tttgttccga gaatttcgtg tcaaaatgtt ggttattgac
     6601 gagtttcatt ctctgttggt tggtacacca cgcttacaac gacaggtgat gaacgcaatt
     6661 aagatgcttt gtaacgagct acaaattcca attgtcggtg ttggtactcg tgatgcaatt
     6721 cgggtattac atacggatcg acaacatgcc agtcgttttg atgttgcgga attgccaata
     6781 tggaaactag ataaggaatt tcaaaaactc ctatttcaat tccaagggat tttacctttg
     6841 agggagagtt caaatctgca atctccagaa cttgctacga agatccacac catttcaggt
     6901 gggaacttag ggaacgtgca tcgcttacta acagcttgtg cagttcaagc cattacaagt
     6961 ggcacggaaa aaatcacctt agacatcatt gagaaaaatt catgggtaca accaacaaac
     7021 ggctatcgca aaataatcgg ataaaaaaag gtgttattca tacccctatt tattcaaatg
     7081 aaagtattag ctcgtggtta attcgtgcat cctttgattg tggtacagat ccactgactt
     7141 ttacagggtt ttattgggaa aaacatcggt tgtggacatt agatttagat cgtggcttgg
     7201 aaaatattga gccaactatc tatgatgatg tacaggcatt atcgggtaaa atccaacttt
     7261 cagaatattc cttgtttcgc aggctttacc ctataaatgc agatgaaacc ttagctaaag
     7321 gtcaagtaag atgggtgatt ccacgttcgg caaggaatag aacccatcac attggtcaac
     7381 aatattgtcc tttgtgcttg gatgagtcgc cacatttacg caatgattgg cggttagcgt
     7441 ggaattttgg ttgtctcaag cataatatga tgttggcgaa cagatgtttt tgttgtggta
     7501 cattgtatca accccattta ctatcagcgg aaaagaggca tttgaatcat tgtcatcaat
     7561 gtggtgggaa actggaacaa ggcacaatgg aaatgagtct agctgaaaag ctgacattgc
     7621 aaggtattaa tcaggtactc gaaaaagatt caggcatctg ttttggatac aaggtgtcgg
     7681 gtaaggtgtg gtttgatatg ctccgctact gcatcaactt attgagacgt gcatcagaca
     7741 gaccaaatca tgccttagca aaatttgtag ttaatctaca gattgatgtt gaaaatatat
     7801 gtagccccaa aacaggactt tcttttgaac aacttccgct aggtgaacgt acaaatttac
     7861 ttgtgaatgc ctatcatatt ttgggaatgg aagcagattc tattcgtagt gcaatttatt
     7921 tgtgtggcgg aacacaaaaa acctttatgt ttgaaaaata tcctgatttt tggcaagaat
     7981 ttatggcact agcacccgca ggcccaaata gaacacgaaa acgcaccaag ccccaaaatg
     8041 agtctatcac agcaattaat cgccgttggg agcgtttgaa acgcaaacta cacttaaata
     8101 acgaatgaaa attaatgtaa taaaaccaca ggaagaacct tgctccgctt gtggcaaaat
     8161 ttctcgcatt tggcgcagat ataatggcga aggctactgt gccaattgct atgctaagtg
     8221 gtttccgaaa aaagagtgca gctgttgcca tcaaccaaag cgtatctatt tgagttcaac
     8281 agtatgttgg gattgcgaaa aacagactga ctgtgtacgt tgcggtaagg ctgcgggtac
     8341 attcaaaatt ggtaaaatta cccgttatgg tgcagtttgt aatgtgtgtt cacgttattt
     8401 tcgtgaagaa cgagaatgtt ttgagtgtgg tcaactatct agaactatgc ttcgagcatc
     8461 agagtcaggt catagcgagc tactctgctt gaagtgtttt caaaaatatc ggtttgcgac
     8521 ttgtaaaaac tgtcgccgtt atcgcaaagt tcatgaccgt gataatcagc tttgtcgaaa
     8581 atgtagtgag caacgaactt cacaatgccc gaagtgcaaa caggatatgc ctgcgggata
     8641 tggtaatatt tgtgcagatt gttctaggcg aactctactg ttcaacctta ttcgaatgaa
     8701 tgtgcattta ttccgccaca aaaaagtgaa aagagcatat aaaaagttca ttttttggta
     8761 tctcgcaaag tgtggcgtga gtgttgtgct gaaaaaatca gacgaccacg tcctcttttt
     8821 tatgcgttgc gatgaaaatt ggggcaacat tccagactac cgtgagttgg ttacattctt
     8881 taaacccaat ggattacgga cgcatttgac tgtgttgcgt tggttgcttg ataccaatca
     8941 agtcaaagta gatgagagct taaaagagga aatggcgggg ttggaacgta ttcaatccct
     9001 atttaacaaa ttaagtaact ctgtaccttg tattgcaaac tactacacgc agttacaaca
     9061 taaatatgag gcgggcaaaa catcactgaa atctgttcga ttagctttac aacctgcgat
     9121 tgatttcatc agttcagaat ctgtctcgtt actgccgact caagtacaac tgaatagcta
     9181 tcttgtggca aaaacgggac agattgctgc tattacaggc tttataaacc acctgaaccg
     9241 agaatatcat tgtgaattag aaattgaccg ctccctcatt caaaagatga aagaaaagca
     9301 gttgaagcag caagcaaaac agcgattagc gatactctac aagcaagaaa aactaagtat
     9361 caaagagcaa aatgagctac tctcagtcgt attactgaat ttgcacaaca tttggataaa
     9421 atcaccgaaa aaattaagta tttcagagat agacggtata gcctactatg ttgataatga
     9481 gaaaaaatac tttataccaa aagacattca catacgcctg atggaataag ctgtcgtcaa
     9541 tttttatttt tgcgatctgt gtcgagaaaa taatatttat gaatcgacag atgaaataat
     9601 attgataaag tctctttgtg tgttcaacaa acaggagata aatatgacat taaaggctca
     9661 atttcgtgaa tggcttaaaa aagagcaaga acatgatgaa atgatagggt tcgcccatat
     9721 cccttgcatt ttatctaaag tggatagcaa actggcgatt gttagcggaa atgcttatga
     9781 gaagaaatat ctcagatatt ggatcaagtg ttttaggttc gatagaaata tcagcaagta
     9841 tattaaatag gttaaatatc tagct
//
LOCUS       DANLTI010000100         9759 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.100, whole genome shotgun sequence.
ACCESSION   DANLTI010000100 DANLTI010000000
VERSION     DANLTI010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9759
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.100"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..576
                     /locus_tag="PXB09_001983"
     CDS             <1..576
                     /locus_tag="PXB09_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5234064.1"
                     /translation="GAYLEASEAQIFRGKYQEMEFVPNPDFDGPYYGLDFGFAQDPTA
                     AVKCWVFNGDLYIEFEAGKVGLELDDTADFIAKGVPQIADHVVRADSARPESISYLKR
                     HGLPRIIGVEKWKGSVEDGIEHIKSYGKVFIHPRCQQTLNEFRLYSYKTDRLSGDVLP
                     VVIDAHNHFIDALRYALTPLMQVKSAKGVLL"
     gene            573..1949
                     /locus_tag="PXB09_001984"
     CDS             573..1949
                     /locus_tag="PXB09_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HDL5234065.1"
                     /translation="MSLEQDRLAFLAEALGLGNIKRRTLWKEFGYPNTLTFNHFLKAY
                     KRNSIAFAAINRLLDGCWVDCPVIVEGEQKNESKQTTEWESKVERFMKRYWSAIKEAD
                     RRNLVGNYSALLLQVRDGQQWDQPILQGALSSIGEFGLVKLIPVWQSQLSVTEFQEDV
                     TADNYGEPLMYQFSESAFGKKSVSRNIKVHASRVILLNEGGDFNSPHSGVPLLEAGYN
                     KLVDLEKTSGGSAEGFLKNASRQLGIKLTKDVDLRQLEDSAKALGFSSFSDALNDKIK
                     KINSGTDSALITHEGDASVLSVAPADPKPTWEISANEFAASVQIPFTILFGQQTGRLA
                     SDEDKTDWANRCNGRRNGFLTDVITQLLNRLWFIGVLPMPKNSDVTVSWSDLLAPSEK
                     EKIANAQALASVATTSQSAFGFAAVTANEIRESLGFEPLPDNLIPPTIDDENEDQDEN
                     QATADSDK"
     gene            1903..2841
                     /locus_tag="PXB09_001985"
     CDS             1903..2841
                     /locus_tag="PXB09_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5234066.1"
                     /translation="MKIKTKIKPLRIPTNKADPLNMGVSVAKLFRHIDVIYSQIKRSI
                     KQQILQKMSLRLQANNFEYFPSYLTATELADLLETLQKIIDKEILSNGSQGENLWFDS
                     YIDEAALKGTQSAVTDLGLQSEAYRSQRNLSSIVFSPAYFNRLAIAHMASYSEWQGLS
                     DELRKSLAGVITEAVLNGKNVKETAREIRQKLDVSSKRAKRIAQSSQLAAYRRAEWQE
                     AEEAKEELGLNTKLLHFSALKATTRLAHAQRHGKYFDVAEVREWYSRDGNQFNCYCKQ
                     SVVVVNADGKTDIEPLLVGLAKERKQWVGALKNVKK"
     gene            2828..4198
                     /locus_tag="PXB09_001986"
     CDS             2828..4198
                     /locus_tag="PXB09_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HDL5234067.1"
                     /translation="MSKNNVNIVTVINSKNISTESIDGDQHLIIRGVVPIVDDVVMND
                     GLYPADEINKSYNSLEGNFMPLGHPKIEGKYVSAQDVRAVNKHHVGAWAKNVRKESGK
                     VLVDMYINRRFAEGSEQGKTLLERLDGMVTNTNAEPIHVSTGLILNKVKQSGKSKGKK
                     YSWIATNMSFDHIAILLDVPGAATPDDGVGIFVNQDGSEMGVENVNLTQAADYRTEKL
                     FDKVRFYLMANSDLSFEEIHRALREAIRPEGKDKWSFWVEAVYPKYFIYSDDNSGKKY
                     KRSYFIDENDNVQLTSEPVEVVKKIGYEEITTNEEHNPMKTKILAVLNAANVKTEGLN
                     DDQLLEAYNKLQADKGKEPEKPKNEDDSEIDEKIKKAVNAAIEPLQQALQANTDKEQA
                     AMRAAVKAKFNMSDAAVNALQGEVLTELYAQTQQSVGLNNNSANGNGDNQWDGYSLNQ
                     EEKGNE"
     gene            4191..4625
                     /locus_tag="PXB09_001987"
     CDS             4191..4625
                     /locus_tag="PXB09_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234068.1"
                     /translation="MSNVIYRGSVKREPQTVNIVINDTSAPGAVVKLHNGKLEAAADL
                     KGRRFLLGNNRFKGQTIEQAYAKGDTATAFRLEPEQEYYAQIADGTYNFGDELTVKQA
                     GGKLTKAETGDVVLFFFDEESQRVISGGKGYADVVVANAYTK"
     gene            4640..5629
                     /locus_tag="PXB09_001988"
     CDS             4640..5629
                     /locus_tag="PXB09_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HDL5234069.1"
                     /translation="MLKFTKEQERFVINERINYDKKHALMAANSAGLLGNAMTLPKDV
                     WAEWDRDAVQIQREELVVFNDLAGISKSMPIGKLIHHFQTVSDSGSVNISLDGRSSAK
                     TDNVVLNYHGTPLPIIDSTFSFGWRDMSAAQSEGYQIDGAARANSLRKVAEKMEDLAL
                     NGDSSIVVGNAKLYGLRTAPNRMTNTHNLDLATATPKEIYDVFRDLISKFHAKNYYSP
                     VTLYVNYGDYFAMSTRDYSEQKSEGSILNKVMTIPQIAKIVPASRVPQNEILGLCKRS
                     DVYQVLNGMPLVTRPIARHNETDDYSFQIMAAVAVEFKFDDKGNAGYIQYTKS"
     gene            5641..5892
                     /locus_tag="PXB09_001989"
     CDS             5641..5892
                     /locus_tag="PXB09_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234070.1"
                     /translation="MKWLLTHDSHELKKGDVYEGETLPLWLVGKAIEIEEKSFEVATP
                     SDHADGETGETGETGETGETGETGETGETGQKGKKDKGK"
     gene            5895..6272
                     /locus_tag="PXB09_001990"
     CDS             5895..6272
                     /locus_tag="PXB09_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234071.1"
                     /translation="MAAEIELSEARTTLDELGFTSPNSLLELYVQQTNTLDQALNKSG
                     YSEETQKLIKLYLVAILAISSGARRIKSEGAPSGASRTFEYDPNALDNLKSAIRSIDP
                     KGCAESLLPKDKVVGFFDVVGGC"
     gene            6272..6616
                     /locus_tag="PXB09_001991"
     CDS             6272..6616
                     /locus_tag="PXB09_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234072.1"
                     /translation="MSNLSNWSYTAKATLWQAKGKNDDGVLVFSTPQIISCDYGADRK
                     RARFEIGREQAVKNVIWTEFAHAKLGDYVLIGESEQADPILAGAEEIIHIQRFADTFD
                     RNRDDFALITGG"
     gene            6618..6986
                     /locus_tag="PXB09_001992"
     CDS             6618..6986
                     /locus_tag="PXB09_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5234073.1"
                     /translation="MGIKVKGIRQVKQRLNQVVGEVQSQKATRAMFRILNAVAPLAAH
                     YTPVDTSTLINSQFTEMEVNGTRLIGRVGYSANYAAYVHDPNIKQNFRKPSAKKEFLT
                     SALNESKATIKSIVKEELSL"
     gene            6983..7363
                     /locus_tag="PXB09_001993"
     CDS             6983..7363
                     /locus_tag="PXB09_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234074.1"
                     /translation="MISYVKAFKQWLEAHSLADGYVVQLYQWEDTQKAKPVIVIQPNS
                     GSPQVSDLSSEHYLLISLVAGKNSGYTIEERARAIMSKILVEPFASFGYIESMGGLPA
                     PIFTEDNRMIFRLPLRIISTNQEE"
     gene            7367..7849
                     /locus_tag="PXB09_001994"
     CDS             7367..7849
                     /locus_tag="PXB09_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234075.1"
                     /translation="MGSPSPQNNAENLVVGRAVVLEYGTTDAKPQESEWKVAGAMTTK
                     SWDFSPNSVTSEADDAGGFPETLITNSDFSISGDGEWRKRPKSKELGIKDLVVLYANA
                     VKNRTQPYIWVRLKYAGLTILGKMVITALSSEAPTNDLVKFSIEFKVGDSSTIEIAAA
                     "
     gene            complement(7889..8305)
                     /locus_tag="PXB09_001995"
     CDS             complement(7889..8305)
                     /locus_tag="PXB09_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5234076.1"
                     /translation="MFYPALFTPAEEGGFVVTFPDLPEAITQGDTFEEAMEMAEDVLL
                     SCVEIYFDEDRRFPLTRPVNTDEVPVFMPESIYAKVLLHNTMQEQAVSKAEIARLTNI
                     RPPEVQRILAPRHITKIDTIGRILASLGKPLQLSLG"
     gene            complement(8361..8537)
                     /locus_tag="PXB09_001996"
     CDS             complement(8361..8537)
                     /locus_tag="PXB09_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010848235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5234077.1"
                     /translation="MKQSEFLRWLKANGVEVENGSKHLKLYYKGKRSHLPKHPSQELK
                     TGLVEGVKKQLGLK"
     gene            8633..9304
                     /locus_tag="PXB09_001997"
     CDS             8633..9304
                     /locus_tag="PXB09_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234078.1"
                     /translation="MKMVSYPITEIGEMLIATDGRDFLFRPSFKNIYKIGSPQEIVKI
                     YALLHGCEIREILPHILTKSESHQSYFWSVLNSPVFGRKILQNAMIVMSCCCDDDISL
                     LIGEWLPSKSGVRYKLGKMPPETIINFAKNLMGHGVIGCCELPKKEQSAKNEFSESFD
                     AVEYISLARTHFNMSREDAENLTMTELQQLLKSQMPAENNSYGQFTEEEYDRIMAEYE
                     KRRAA"
     gene            complement(9319..9552)
                     /locus_tag="PXB09_001998"
     CDS             complement(9319..9552)
                     /locus_tag="PXB09_001998"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234079.1"
                     /translation="MKKDCTKQDFANWLNENQEVCWIKEVSIERILSCVDDYVAICNA
                     RSKDEFELLNDIRELFYSAHYKDFTPVLSGRFF"
BASE COUNT         2895 a         2040 c         2331 g         2493 t
ORIGIN      
        1 ggtgcttatt tggaagcgag cgaagcgcaa atctttcgcg gtaaatatca agaaatggaa
       61 tttgtgccga accctgattt tgatggccca tattacggct tagattttgg tttcgcgcaa
      121 gatccgacgg cggcggtcaa atgctgggta tttaatggcg atctgtacat cgagtttgaa
      181 gcaggcaaag tgggcttaga acttgacgac accgcagact ttattgccaa aggcgtgcca
      241 caaattgccg atcacgttgt gcgtgcagat tcggcgcgtc ctgagtcaat tagttacctc
      301 aaacgtcacg gcttaccgcg cattatcggt gtggagaagt ggaaaggctc ggtggaagac
      361 ggcattgagc atattaagtc ctacggcaaa gtctttattc acccacgctg tcagcaaacg
      421 ctcaacgaat ttcgccttta ttcgtacaaa accgaccgct tatcgggcga tgtattgcct
      481 gtcgtgattg atgcccataa ccactttatt gatgcgctac gctacgcatt aacgccgttg
      541 atgcaagtta aaagtgccaa aggagtttta ctatgagcct agagcaagac agactggctt
      601 ttttagccga agccctaggg cttggcaata tcaaacgaag aacgttatgg aaggagtttg
      661 gctaccctaa taccttaaca ttcaaccatt tcttaaaagc ctataagcgc aatagtatcg
      721 cttttgcagc gattaaccgc ttacttgacg gttgttgggt tgactgcccc gtaatcgttg
      781 agggtgagca aaagaacgaa tcaaagcaga caaccgaatg ggagtccaaa gttgaacgtt
      841 ttatgaaacg ctactggtcg gcaatcaaag aggcagatag acgaaacctt gtcggtaact
      901 attcggcgtt attacttcaa gtaagagatg gtcaacaatg ggatcagcct attttgcaag
      961 gcgcgctatc tagcattgga gagttcggac tggttaaact gatccccgtg tggcagtcac
     1021 agctttcagt gacagagttt caagaggatg tgaccgccga taattacggc gaaccgctga
     1081 tgtatcaatt cagcgaatct gcctttggca aaaaaagcgt gtcacgaaat atcaaggttc
     1141 acgcaagtcg tgtaattttg ctcaatgagg gtggcgactt taattcccct cattctggag
     1201 ttcctctgct tgaggcgggt tacaacaagc tagttgatct cgaaaaaaca tcgggcggca
     1261 gcgccgaagg ttttctgaaa aacgcaagcc gacaattagg gatcaaatta acaaaagatg
     1321 ttgatttgag acagctcgaa gacagcgcaa aagcccttgg gttttcttca ttttctgatg
     1381 cgttgaacga caagatcaag aaaatcaact caggaacaga ctcagccttg attactcacg
     1441 aaggtgatgc ctctgtgttg tcagtcgcac cagcagatcc gaagccaacg tgggaaattt
     1501 ctgcaaatga gtttgccgcc tcagtacaaa tccctttcac gattttgttc ggacagcaaa
     1561 cagggcgatt ggcaagtgac gaggacaaaa ccgactgggc aaaccgttgc aacggtcgtc
     1621 gaaatggttt tctcaccgat gtgataacac aactacttaa tcgcttgtgg ttcatcggtg
     1681 tgctacctat gccaaaaaat agcgatgtca cagtgtcttg gtctgactta cttgcaccaa
     1741 gcgaaaaaga gaaaatcgca aacgcacagg ctttggcttc agttgcaact acatcgcagt
     1801 ctgcctttgg ttttgccgcg gtaacagcga acgaaatccg cgaatcttta gggtttgaac
     1861 ctctgcctga taatctgatt ccgccaacaa ttgacgacga aaatgaagat caagacgaaa
     1921 atcaagccac tgcggattcc gacaaataaa gccgatccgc tcaatatggg agtgtcggtt
     1981 gccaagctat ttcgtcacat tgatgtcatt tactcacaaa ttaagcgctc cattaagcaa
     2041 caaatcttgc aaaagatgtc actgcgactg caagcaaata attttgagta ttttccttcg
     2101 tatcttactg cgactgagtt ggcggatttg cttgaaacct tgcaaaagat tatcgacaaa
     2161 gagattttgt cgaatggttc tcaaggcgaa aatctctggt ttgactccta tatcgacgaa
     2221 gcagcactaa aaggcactca gtctgcggtc actgatttag gtctgcaatc agaggcttat
     2281 cgcagtcagc gaaacttatc atcaatcgtt ttcagtcctg cgtacttcaa ccgattggcg
     2341 attgcacaca tggcaagtta tagcgagtgg caaggtttaa gcgacgagtt gcgaaaatct
     2401 ttggcggggg tgatcacgga ggcggtttta aacggcaaaa acgtgaaaga aactgcccgt
     2461 gagattcggc aaaaacttga tgtgtcatca aaacgggcga agcgaatagc gcaatcaagc
     2521 cagttggcgg catatcgtcg ggcagaatgg caagaggcgg aagaggcaaa agaagaactt
     2581 gggctaaaca ccaagctctt acatttttca gcgctcaaag ctactacgcg attagcacac
     2641 gcccaacgcc acggcaaata cttcgatgtt gcagaggtgc gcgaatggta tagccgagac
     2701 ggcaaccaat tcaactgtta ctgcaagcag tctgtggttg tggtcaacgc cgacggtaaa
     2761 acagatattg agcctctcct tgttgggttg gctaaagaac gtaaacaatg ggtaggagca
     2821 ttaaaaaatg tcaaaaaata acgtgaacat cgtcaccgtc attaacagca aaaatatcag
     2881 cacagaatct attgacggag atcaacacct gattatccgc ggcgttgtgc cgattgttga
     2941 tgatgttgtg atgaacgacg gactttatcc tgcggatgaa atcaataaaa gctacaacag
     3001 cttagagggc aactttatgc cgcttgggca tccaaaaatc gaaggtaaat acgtttcagc
     3061 ccaagatgtt cgagcggtga acaaacatca cgtcggtgcg tgggcgaaga acgtacgcaa
     3121 ggaaagtggc aaagtgctgg tcgatatgta tatcaaccgc cgctttgcgg aaggttcaga
     3181 acagggcaaa accttgcttg aacgacttga cggaatggtg acaaacacca acgctgaacc
     3241 tattcacgtt tccacagggc tgattctaaa caaagtcaag caatcgggta aatccaaagg
     3301 caagaaatat agctggattg cgacaaatat gtcgttcgat catattgcaa tattgcttga
     3361 tgtgccgggc gcggcgacac ctgatgatgg cgtggggatt tttgtaaacc aagacggaag
     3421 cgaaatgggg gtggaaaatg taaacctaac acaagcggcg gattaccgca cagaaaagct
     3481 gtttgacaaa gtacgatttt acctgatggc gaactcagat ttatcgtttg aagaaattca
     3541 tcgcgcgctg cgtgaagcta ttcgccccga aggcaaagat aagtggtcat tttgggtcga
     3601 agctgtttac ccgaaatact tcatctattc ggacgataac agcggcaaga aatacaagcg
     3661 gagctatttt attgacgaaa atgacaatgt gcagctcact agcgaacctg tcgaagttgt
     3721 caagaagatt ggctacgaag aaattacaac caatgaggaa cataatccaa tgaaaaccaa
     3781 aatcttagcc gtgttgaatg cggcaaacgt gaaaacggaa ggcttaaatg acgatcagct
     3841 cttggaagcc tacaacaagc tgcaagcgga taagggtaaa gagcctgaaa agcctaaaaa
     3901 tgaagatgac agcgaaattg atgagaaaat caagaaagca gtcaatgccg cgattgagcc
     3961 actccagcaa gccttgcaag ctaatactga caaagagcaa gcagcaatgc gtgcggcggt
     4021 gaaagccaag ttcaatatga gcgatgccgc agtcaatgct ttgcaaggcg aggtattaac
     4081 tgagttgtat gcgcaaacgc aacaatcggt cggattaaac aataattcgg caaacggcaa
     4141 cggcgacaat caatgggatg gttactcact caaccaagag gagaaaggca atgagtaatg
     4201 taatttatcg cggttcggtc aagcgtgaac ctcaaacggt gaatatcgtg atcaacgata
     4261 cttcggcacc gggtgcagta gttaaactcc acaacggcaa attagaggcg gcggctgatt
     4321 taaaaggtcg ccgtttttta ttgggcaaca accgctttaa ggggcagaca atcgaacaag
     4381 cgtatgcgaa gggcgatact gcaacggcgt ttcgtttaga gcctgaacag gagtattacg
     4441 cgcaaattgc cgacggcact tataactttg gcgatgaact cacggtaaaa caagcgggcg
     4501 gcaaactgac caaagcggag acgggcgatg tagtgctatt tttcttcgac gaagaatcgc
     4561 agcgtgtaat cagtggcggc aaaggctatg ccgatgtcgt ggtggcaaac gcctacacta
     4621 aataagaggt aacaaagcaa tgttgaaatt cacaaaagaa caagaacgct tcgtgattaa
     4681 cgagcggatc aattacgaca aaaaacacgc gctaatggca gcaaattcgg cggggttatt
     4741 gggcaacgcg atgactttgc cgaaagatgt ctgggcggaa tgggatcgtg atgcagtgca
     4801 aattcagcgc gaagaattgg tggtgtttaa cgatttagcg ggcatttcaa aatcaatgcc
     4861 gattggcaaa cttattcacc atttccaaac ggtatctgat agcggttcgg ttaatatctc
     4921 attagacggt cgttcatcag cgaaaaccga taacgtggtg cttaactacc acggtacacc
     4981 gttgccgatt attgattcca ctttctcttt tggctggcgc gatatgtcgg cagctcaaag
     5041 cgaagggtat cagatcgacg gtgcagcacg cgcgaacagt ctccgcaagg tggctgaaaa
     5101 aatggaagat ctcgctttaa atggtgattc ctctattgtg gttggcaatg ccaagcttta
     5161 cggcttgcgt actgcgccaa atcgtatgac taacacacac aatctggatt tagccactgc
     5221 gacaccgaaa gaaatttacg atgtgttccg tgacttgatt agcaaattcc acgcgaagaa
     5281 ctactactct cctgtaacgc tttatgtgaa ctatggcgac tatttcgcaa tgagtacacg
     5341 tgattactcc gagcagaaat ccgaaggatc tatcttgaac aaagtgatga cgattccgca
     5401 aattgcgaaa atcgtgccag caagccgtgt accgcaaaat gaaattctcg gcttgtgcaa
     5461 gcgttcggat gtgtaccaag tgcttaacgg tatgccgtta gtgactcgtc cgattgcgcg
     5521 ccataatgaa accgatgatt actcgttcca aattatggca gccgttgccg tggagttcaa
     5581 attcgacgat aaaggcaatg ctggctatat ccagtacact aaatcctaag gcggtgcaaa
     5641 atgaagtggc tattaacaca cgatagccac gagttgaaga aaggcgatgt ttacgaaggc
     5701 gaaacattac cgctttggct tgtgggcaaa gctatcgaaa tcgaagaaaa atcctttgaa
     5761 gttgcaacgc cttctgatca cgctgacggc gaaactggcg aaactggcga aactggcgaa
     5821 actggcgaaa ctggcgaaac tggcgaaact ggcgaaactg gtcagaaagg caaaaaagat
     5881 aaaggcaaat aactatggca gcagaaatag agctatccga agcgcgaaca acgcttgacg
     5941 aactgggttt cacttcgccg aactctctgc ttgagcttta cgttcagcaa acgaacacct
     6001 tagaccaggc gttgaacaaa tcggggtaca gcgaagaaac acagaaactg atcaagctct
     6061 atctggttgc tattcttgca atttcatctg gggcgcgccg tataaagtca gaaggtgcgc
     6121 ctagcggtgc aagccgaacg tttgagtatg atccaaacgc gctagacaac cttaagtcgg
     6181 cgattcgctc aattgatccg aaaggttgcg ctgaaagttt gctacccaaa gataaagttg
     6241 tcggcttttt cgatgtggtc ggaggctgct aatgtcaaat ttatcgaatt ggtcctacac
     6301 cgcaaaagcc acgctttggc aggctaaagg aaagaacgat gacggcgttt tagttttttc
     6361 tacgccacaa atcatttcct gtgactacgg tgcagataga aagcgcgcac gttttgagat
     6421 tgggcgtgaa caagcggtca aaaatgtgat ctggacggag ttcgcccacg ccaaattagg
     6481 cgattatgtt ctgattggcg aaagcgagca agccgatccg attttggctg gcgcagagga
     6541 aattattcat atacagcgct ttgctgatac gttcgaccgc aatcgtgatg attttgcgct
     6601 gataacaggc gggtaaaatg gggatcaaag taaaaggcat aagacaggtc aagcagcggc
     6661 tgaatcaggt tgttggcgag gttcagagcc aaaaagcaac tcgggcaatg tttcgcattt
     6721 tgaatgcggt tgcccctctt gcggcgcact atacgcctgt tgatacctca acgttgatca
     6781 acagtcaatt cactgaaatg gaagtgaacg gcacacgctt gattggaaga gtgggttatt
     6841 ctgctaatta tgcggcttac gttcacgatc ctaatatcaa gcaaaacttc cgcaagcctt
     6901 cagcgaagaa agagtttttg acttccgcgc tgaacgaatc aaaggctacg atcaaatcca
     6961 ttgttaaaga ggagttgtca ctatgatttc ttatgtcaaa gccttcaaac aatggttaga
     7021 ggctcactct cttgcagacg gctatgttgt gcagctttac cagtgggagg atacgcaaaa
     7081 agccaagcct gttattgtta ttcagccaaa tagtggttcg ccgcaagttt ctgacctgag
     7141 cagcgaacac tatctgctaa ttagccttgt tgcaggtaaa aattcaggtt acacaatcga
     7201 agagcgagca agggcgatta tgtcaaagat tttagttgag cctttcgctt cctttggtta
     7261 catcgaatca atgggcggat tacccgcccc aattttcacc gaagataatc gaatgatttt
     7321 tcgcttacca cttcggatta tttcaacaaa tcaagaggag tagtttatgg gttctccatc
     7381 tccacaaaat aacgcagaaa atctcgtggt ggggcgtgcc gtagttttag agtacggtac
     7441 gactgatgca aagccacaag aaagcgaatg gaaggttgcg ggcgcaatga cgacaaagag
     7501 ttgggatttt agcccaaatt cggttacatc agaggctgat gatgctggcg gcttccctga
     7561 aaccttaatt acaaactcag actttagtat ttctggtgac ggtgagtggc gcaaacgacc
     7621 aaaatcgaaa gaactaggca tcaaagatct agttgtgtta tacgcaaatg cggtaaaaaa
     7681 tcgcacccaa ccttacattt gggttcgttt gaaatacgca ggcttaacaa ttctcggaaa
     7741 aatggttatc actgcattaa gtagcgaagc cccaaccaat gacttagtga aattctctat
     7801 agagttcaag gttggcgatt caagcactat cgaaattgct gcagcgtaaa aaatcccacc
     7861 ctctataaca agagcggtgg gattatcatt atcctaggga tagttgtagg ggctttccta
     7921 agctagccaa aatacgacca atagtgtcga tttttgtaat atggcgaggg gctaaaattc
     7981 gctgtacttc tggcggacgg atattagtta atcgggcaat ttctgccttg cttaccgctt
     8041 gttcttgcat tgtattatgc aaaagcactt ttgcgtagat gctctctggc ataaacacag
     8101 gcacttcgtc ggtatttact gggcgagtga gcggaaagcg tctatcttca tcgaaataaa
     8161 tttcaacaca agatagtagc acgtcttctg ccatttccat tgcttcttca aatgtatcgc
     8221 cttgggtgat agcttctggc aaatcaggaa atgtcactac aaagccccct tcttcagcgg
     8281 gggtaaataa cgctggataa aacatatttt ctccttattc aagggtgtag tgaaagcccc
     8341 ttaacatcag gggctttata ttattttaag cctagttgct ttttaacccc ttccactaag
     8401 cctgttttta actcttggct tgggtgtttg gggaggtggc ttcttttgcc cttgtagtag
     8461 agtttcaaat gctttgatcc attttcaacc tctaccccat tagcctttag ccaccttagg
     8521 aattcgcttt gcttcactac ctcctcctat ttgtttaact tgggttcatt atatgcaaaa
     8581 atgctaactt tgtcaacaga aagttagcaa aaatgctaat ttttttgttg aggtgaaaat
     8641 ggttagctat ccaattactg aaattggtga aatgcttatt gcaaccgatg ggcgagactt
     8701 tttattcaga ccgagtttca aaaatatcta caaaattgga agcccacaag aaattgtaaa
     8761 aatctatgca ctattgcacg gctgtgagat tcgagagata ttgccgcaca ttttaaccaa
     8821 atcggagtct catcaatctt acttttggtc agtgctgaat tcgcctgttt ttggcagaaa
     8881 aattctgcaa aacgcaatga tcgtgatgtc gtgctgttgc gatgatgata tttccctgtt
     8941 gattggcgag tggttgccgt caaagtctgg cgttaggtac aagttgggta aaatgccacc
     9001 tgagacaatt atcaattttg caaaaaattt aatgggtcac ggagtgattg gttgctgcga
     9061 attgccaaag aaagaacaat ctgcaaaaaa tgaattttca gaaagttttg atgctgttga
     9121 gtacataagt ttagcccgaa ctcatttcaa tatgagccgc gaagacgctg aaaatctcac
     9181 gatgaccgaa ttgcagcaac ttctaaaaag tcaaatgcct gccgaaaata atagctatgg
     9241 acagttcacc gaagaagagt acgacagaat tatggcggaa tatgagaaaa gaagagcggc
     9301 ttaaatagcc gctaacattt aaaagaacct acctgataga acgggagtga aatccttgta
     9361 atgtgctgaa taaaaaagct ctcttatgtc attgagtagc tcaaattcat ctttggatct
     9421 tgcgttgcag attgccacat agtcatctac gcaggataaa atacgttcaa tactgacttc
     9481 ttttatccag catacttctt ggttttcatt cagccagttg gcaaagtctt gtttagtgca
     9541 gtcttttttc ataagttctc ctttttgatt atttgcaaaa aaaatcatat caaatcatcc
     9601 gttgttatct attggcgaaa ataatttttg cgacacagat cgcaaaaata ggttttgacg
     9661 gtggaaaaac gaatcttaat tcgtagaatg gtaaaatttc tttattttta aggtattttt
     9721 atgaaaaaaa tgattgtttt tgtagcttct gttttgtca
//
LOCUS       DANLTI010000101         9669 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.101, whole genome shotgun sequence.
ACCESSION   DANLTI010000101 DANLTI010000000
VERSION     DANLTI010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9669
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.101"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..476
                     /locus_tag="PXB09_001999"
     CDS             <1..476
                     /locus_tag="PXB09_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234080.1"
                     /translation="FICFIRKYPKALPFGIMMIFIIPPMIMLIKSYIEVNHILKNIEN
                     DKINFNHQQNKYDSIINKAKNQNSQENNLTEINSNIQILAEKHQLTIESLQWNLEQGK
                     SIELSIIGNSRSLFDFIHSVKQIPYLKYNAISLIKSRQDRKVEMNTTLVILANKE"
     gene            479..892
                     /locus_tag="PXB09_002000"
     CDS             479..892
                     /locus_tag="PXB09_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234081.1"
                     /translation="MRNWFLFITLFISFSVKANDPFFGEKQETQASGNIAESNVEFAK
                     NTENITACKVPDNLSAKNIVTDFDKMTLIGLVKINEVMRALFIDEKQQLLALKENDLL
                     NNEIEIKHINLKSITYINWKLTKDCNIPYEINIKL"
     gene            901..2214
                     /gene="pilQ"
                     /locus_tag="PXB09_002001"
     CDS             901..2214
                     /gene="pilQ"
                     /locus_tag="PXB09_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HDL5234082.1"
                     /translation="MWRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNM
                     VLDDNIETKSTLRLENKSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPI
                     MNLQNNGQNTPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSN
                     SLIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGH
                     YKFGGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEI
                     IASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQIL
                     LDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPI
                     LGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK"
     gene            2295..2708
                     /gene="nusB"
                     /locus_tag="PXB09_002002"
     CDS             2295..2708
                     /gene="nusB"
                     /locus_tag="PXB09_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDL5234083.1"
                     /translation="MKISPRRRARECAVQAIYSWYISQNTVEEVELAFVTDQDMKGVD
                     MPYFRKLFRGVVDNVEAIDEALRPYLDRKESDVDPIERSILRLSTYELKFEHDVPFRV
                     VINEGIEVAKVFGSDDSHKYINGILDKLAPALGRK"
     gene            2771..3751
                     /gene="thiL"
                     /locus_tag="PXB09_002003"
     CDS             2771..3751
                     /gene="thiL"
                     /locus_tag="PXB09_002003"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDL5234084.1"
                     /translation="MGEFDIIERYFNASQRPPRKDVLLSIGDDCALTSLKPNQQLAIT
                     TDTLVCGTHFLPTISPADLAYKSVASNLSDLAAMGAEPAWISLALTLPEINHDWLAEF
                     SEHFFEILDHYNVDLIGGDTTCGPLSLTITAQGIVPQDRGLFRHNAKVGDWIYVSGTL
                     GDSAGGLQLLLNQQSEQVNWNKEQSYLIQRHLRPTPRVLLGLTIASIANAAIDISDGL
                     LSDLSHILKRSDCGAVLNLENFPLSDVLLSCYSRTEAEYFALNGGEDYELCFTVPNDN
                     KAKLDKALANIGVTYTCIGQIRSAKEGLTLLRHNQPVTLPSQRGYDHFKK"
     gene            3756..4229
                     /locus_tag="PXB09_002004"
     CDS             3756..4229
                     /locus_tag="PXB09_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDL5234085.1"
                     /translation="MKPINLKNPIHFFAFGFGSGLLKPAPGTWGSLAGLIVAIALWSI
                     TQSALFFGLLTLVSFIAGCVICTKASQDLEVHDDGRIVWDEIVAIFLMFTCLPEYNLL
                     GYLLAFISFRIFDILKPFPIRYFDEKLESGLGIMFDDILAAIFALISLHLLYYFI"
     gene            4236..4859
                     /locus_tag="PXB09_002005"
     CDS             4236..4859
                     /locus_tag="PXB09_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDL5234086.1"
                     /translation="MLTILFIHFAGLISPGPDFFYVVRQSASHSVKSGVLAATGISIG
                     IIFWAAFAIFGLAWLSNSIGSLFQYAIMIIGGCYLVYIGSQMVRVTENIIFVENKAQL
                     TPLNPWQEIKKGLLINIFNAKAGVYFTSVISAYVDNLSNTLQMFELLLLFVVSTFIYF
                     CVVALLFSRRPVRLFYAKYSRYIDNISGVIFILFGSMLIYEGFSHFI"
     gene            4971..5576
                     /gene="ruvA"
                     /locus_tag="PXB09_002006"
     CDS             4971..5576
                     /gene="ruvA"
                     /locus_tag="PXB09_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005686751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDL5234087.1"
                     /translation="MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQIGEE
                     ATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNGVGPKLALAILSAMSVSQFATAI
                     ENEELAKLTKIPGIGRKTAERLLVELKGKFKGMAQSDFFVEVSHEQIVASNTPDPANE
                     ALDALIALGYKPADAEKMIKKVNKSGATSEQLIREALKNSL"
     gene            5713..6717
                     /gene="ruvB"
                     /locus_tag="PXB09_002007"
     CDS             5713..6717
                     /gene="ruvB"
                     /locus_tag="PXB09_002007"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDL5234088.1"
                     /translation="MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVHDQMEIF
                     IKAAKLREEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLT
                     NLEPYDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
                     TTRAGSLTSPLRDRFGIVQRLEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRG
                     TPRIANRLLRRVRDYADVRNNGIITSDIAKQALAMLDVDSEGFDFMDIKLLQAIVERF
                     DGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSRTYAHLGITQID
                     "
     gene            complement(6816..7499)
                     /gene="artM"
                     /locus_tag="PXB09_002008"
     CDS             complement(6816..7499)
                     /gene="artM"
                     /locus_tag="PXB09_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDL5234089.1"
                     /translation="MWWDYLVEISQGIGTSLQLTFVALIIAFILAIILTFILSLENRP
                     LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNS
                     AAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTLKILVPYALKRALPSYSNEIVLVFK
                     GTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLA
                     FERFETEKA"
     gene            complement(7499..8170)
                     /gene="artQ"
                     /locus_tag="PXB09_002009"
     CDS             complement(7499..8170)
                     /gene="artQ"
                     /locus_tag="PXB09_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDL5234090.1"
                     /translation="MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVLETSKIAC
                     IRKPTSIIITLLRGLPEILVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAA
                     YASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKD
                     TALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRF
                     ERGVA"
     gene            complement(8170..8895)
                     /locus_tag="PXB09_002010"
     CDS             complement(8170..8895)
                     /locus_tag="PXB09_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDL5234091.1"
                     /translation="MKKLLLASAIAFATLSANAQETITFAMEPSYAPFETTNEKGEVI
                     GFDVDIAKALCEELKATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVAFTN
                     AYLENSVSYVAMKGKFTPETAKNVGVQNGTTFQQYLSKNAKQYNLKPYASLQSAVLDL
                     KNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALLEKLN
                     SALATIKTNGKYEQIYNTWMAGK"
     gene            complement(8921..9655)
                     /gene="artP"
                     /locus_tag="PXB09_002011"
     CDS             complement(8921..9655)
                     /gene="artP"
                     /locus_tag="PXB09_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDL5234092.1"
                     /translation="MAIRIQNVNFFYGSNQALFDINLEIEKGDTVVLLGPSGAGKSTL
                     IRTLNLMEVPQSGTLAIANHQFDLTAKTDSKAVSLLRREVGMVFQQYHLWPHLTVMQN
                     LIEAPMKVLGLSKEEAVARAKGHLARLRLSEFAERFPLHLSGGQQQRVAIARALMMQP
                     QVLLFDEPTAALDPEITAQVVDIIKELQSTGITQVIVTHEVGVARKVASKVVYMEKGT
                     IIEQGDASCFESPKTEQFAQYLSHSE"
BASE COUNT         3003 a         2005 c         1818 g         2843 t
ORIGIN      
        1 agtttatttg ctttatccga aaatatccta aagcattacc atttggcatt atgatgatat
       61 tcatcattcc acctatgatt atgttgataa aatcctatat tgaggttaat catattttaa
      121 aaaatataga aaatgacaag attaacttta atcatcaaca aaacaaatat gactcaatta
      181 tcaataaagc taaaaatcag aacagccaag agaataattt aaccgaaata aacagcaaca
      241 tacaaatatt agctgaaaaa caccaactaa ccattgaaag tttacaatgg aatttagaac
      301 aaggtaaaag tattgaattg agtattatcg gcaatagccg atctttattt gattttatcc
      361 attcagttaa gcaaatacct tatttgaaat acaatgcgat tagcctcatc aaatctcggc
      421 aagacagaaa agttgaaatg aatactacct tagtcatatt agctaataag gaataacaat
      481 gcgtaattgg tttttattta ttactttatt tatcagtttt tctgtaaaag caaatgatcc
      541 tttctttgga gaaaaacagg aaactcaagc ctcaggcaac atcgctgaaa gcaatgtgga
      601 atttgcaaaa aatactgaaa acatcaccgc ttgtaaagta cctgataacc tttctgcaaa
      661 aaatatagta actgattttg acaaaatgac actgatagga ttagttaaaa tcaatgaagt
      721 aatgcgtgca ttatttattg atgaaaaaca acaattactt gctctaaaag aaaatgactt
      781 gcttaacaat gaaattgaaa taaaacatat taatcttaaa tccattactt atattaactg
      841 gaaattaact aaagattgta atatccctta tgaaattaac atcaaattat agaggttgat
      901 atgtggcgaa tttttatata tttcttatgc ggtttttcat tagcctatgc gaataccatt
      961 tccatagttt taaaaaatgc tccaacttcg cttattttta cttatttagc ggaagaaacc
     1021 ggtaaaaata tggtgcttga tgataatatt gaaaccaaat caacactacg attagaaaat
     1081 aaatcggttg acgagatttt taaaacgctt ggcaaagtca ataaattatc cttaacgcaa
     1141 gaagatgata ttgtttatat tcacaaaaaa gaggaaaaag cggctgactt aacgcctctg
     1201 ccaataatga atttgcaaaa taatgggcaa aatacaccgc ttgtcaccgc ccctaagtta
     1261 atcacaaaaa ccttgaaact acattatgca aaggcttcag aggtgattga gtcgttaacc
     1321 aaaggcagcg gaacgttttt atcggaaaac ggttatattc actttgatga aagaagcaat
     1381 agcctgattg tgaaagacag tgcaaaatcg cttaaaaata tcgagaattt agtaaaacag
     1441 ctcgaccaac ccaccgagca aattgcgatt gaggctagaa ttgtcactat cagtagcgag
     1501 catttgcaag agcttggcgt tcgctgggga attttttctc gtggggctgg gcactataaa
     1561 tttggcggac ggctggaagg caatggactc aacaatgtca ccaataactt aaatgtaaat
     1621 tttccgatta ctggtggagc atctgccgta ttacaggttt cgtccattaa tagcagagtg
     1681 cttgatttag aattaagtgc attagaacaa gaaaatagtg tggaaattat tgccagccca
     1741 cgcctgttaa ccaccaataa aaagccggca agtatcaagc aaggcacgga aattccttat
     1801 gtgatgtaca acaccaaatc ggaagccacc gatgtcgaat ttaaagaagc ggtattaggg
     1861 cttgaagtcg ttccacacct ttcaacccaa aatcaaattc tactcgatct gatcgttacc
     1921 caaaattcgc caaattccca atccggcagt agtggcttaa ttacgattga taaacaagag
     1981 ctaaatacgc aagtatttgc caaacacggc gaaaccattg tacttggtgg tatttttcaa
     2041 catttaaccc aaaaaggcga agataaagtg ccgattttag gctcaattcc cttcatcaag
     2101 cggttattta gtcaaactcg agataaaatc agcaaaagag agctagtcat ttttgtgacg
     2161 ccttatatcc ttcaatctaa tgaaaagagc agcaaccgca aaaaatcaaa atagcacatc
     2221 ataaacgcaa gcaaaaatag gggaagtgtg atagaatcag ccgtcatttt ttgagttaaa
     2281 gatttagagg ttttatgaaa atttccccac gtcgccgtgc aagagaatgt gcggtgcaag
     2341 ccatttattc ttggtatatt tcccaaaaca cggttgaaga agtggaattg gcgtttgtga
     2401 ccgatcaaga tatgaaaggc gttgatatgc cttatttccg taaacttttc cgtggcgttg
     2461 tggataatgt agaagccatt gatgaagcat tacgccctta tttagatcgt aaagagtcag
     2521 atgttgatcc tattgaacgt tctattttgc gtttatcaac ttacgaatta aaatttgaac
     2581 acgatgtgcc tttccgtgta gtcatcaatg aagggattga agtcgctaaa gtgttcggct
     2641 ctgatgacag ccacaaatac attaacggca ttttagataa attagcccca gcattaggca
     2701 gaaaataata agattcccca atttatacat aaattgggga ttttgattat aacgctcaag
     2761 gagatttttt atgggtgaat ttgatattat cgaacgctat tttaatgctt ctcaacgccc
     2821 acctcgcaaa gatgttttac tttctatcgg cgatgactgt gcgctcacat cactcaaacc
     2881 aaatcagcaa cttgcgatca caaccgatac ccttgtttgc ggcactcatt ttctaccgac
     2941 tatttcacct gccgatctcg cttataaaag tgtggcgtcc aatttaagcg atcttgccgc
     3001 aatgggtgca gaacctgcat ggatctcttt agccttaacc ttacctgaaa ttaatcacga
     3061 ttggctagct gaatttagtg aacatttctt tgagattctt gatcactata atgttgattt
     3121 gattggaggg gatactactt gtggaccact atctttgaca atcacagctc aagggattgt
     3181 gccacaagat agaggcttat tccgccataa tgctaaagta ggcgattgga tctatgtttc
     3241 cggcacactc ggtgacagtg caggtggttt gcaacttctg ctaaatcagc aaagcgagca
     3301 agtgaattgg aataaagagc aaagctacct gattcaacgc catttacgcc caacacctcg
     3361 agttttactt ggcttgacta tcgcctctat tgctaatgca gcgattgata tttcagatgg
     3421 tctattgtct gatttaagcc atattttaaa gcgcagtgac tgtggtgcag tattaaacct
     3481 tgagaatttc cccttgtctg acgtcttact tagttgttat tctcgaacag aggcagaata
     3541 ttttgcctta aacggtggcg aagattacga actctgcttt accgtgccaa atgacaacaa
     3601 agccaaatta gacaaagcat tagccaatat cggagtaact tatacatgta ttgggcaaat
     3661 tcgttcggct aaagaaggtt taaccctatt acgtcataat cagcctgtca ccttgccctc
     3721 acaacgaggc tacgatcatt ttaaaaaata acgcaatgaa accaattaat cttaaaaatc
     3781 cgattcattt ttttgccttt ggctttggtt caggcttatt aaagcctgct cccggcacct
     3841 ggggtagcct cgccgggcta attgtagcaa tagccttgtg gtctatcaca caatccgccc
     3901 tgtttttcgg cttactcacc ctagtttctt ttattgccgg ttgtgttatt tgcaccaaag
     3961 ccagccaaga tctagaagta cacgatgacg ggcgaattgt ttgggacgaa atagttgcca
     4021 tctttttgat gttcacctgt ttgcctgaat acaatcttct tggctacctg ctcgccttta
     4081 tcagctttcg catttttgat attttgaagc cttttccaat ccgctatttt gatgaaaaat
     4141 tagaaagcgg tttaggcatt atgtttgatg atattctcgc agccattttt gccctgattt
     4201 cacttcatct tttatattat ttcatttaaa aatttatgct cactatttta tttattcatt
     4261 ttgccgggct tatcagcccc ggccccgatt tcttctatgt cgtcagacaa tccgccagcc
     4321 actcagttaa aagtggggta cttgccgcaa ccggaatctc aatcggcatt attttttggg
     4381 cagcctttgc gatttttggt ttagcgtggc tcagtaatag tattggctcg ctgtttcaat
     4441 atgccattat gattatcggt ggctgttacc tggtttatat tggctctcaa atggtacggg
     4501 taaccgaaaa tatcattttt gttgaaaata aagctcaact cacgccgcta aacccttggc
     4561 aggaaattaa aaaaggctta ttaatcaata tctttaatgc caaagctggc gtttacttta
     4621 ccagcgtcat ttcagcctat gtagataatt taagcaatac cctacaaatg ttcgaactac
     4681 ttctactctt tgtggtaagt acctttattt atttctgtgt ggtggcacta ctcttttctc
     4741 gccgaccggt cagactgttc tatgccaaat atagtcgcta tattgacaat atctcaggcg
     4801 taattttcat cttattcggc tcgatgctga tttatgaagg attcagccac tttatctaat
     4861 cacaagcggt ctgatttcac taaaaatttg caaattccgc tatcaataaa tagtgttatt
     4921 ttatacagtt tctgctatgc tactgccaat tttaactctg agagaacaaa atgattggac
     4981 gattacacgg caaaattatt gaaaagcaac cgcctgaaat tttattagac gtgcaagggg
     5041 taggctatga actactgctc ccgatgacca gtttctacag cctgccacaa attggcgaag
     5101 aggcgactat tttcacccat ttagtggtgc gagaagatgc tcacttgcta ttcggctttg
     5161 cccaaaaaca agatagaact ctattccgtg aattaattaa aaccaacggt gtcgggccga
     5221 agctcgcgtt ggcaattcta tcagcaatgt cggtgtcgca atttgccacc gcgattgaaa
     5281 atgaagagct ggcaaaatta accaaaattc cgggaatcgg tcggaaaacc gcagaacgct
     5341 tattggtgga actcaaaggc aaatttaaag gaatggcaca gagtgatttc tttgtggaag
     5401 tatcgcacga gcaaattgtg gcaagtaata cgccagaccc ggcaaatgaa gcccttgatg
     5461 ccttaatagc cctaggctac aaacctgccg atgcggaaaa aatgattaag aaagtgaata
     5521 aatccggtgc aacgagcgaa cagcttattc gtgaggcgtt aaaaaattca ttatgatatt
     5581 gatagtatag ggcgaaagat atttcgcccc tacaatctca tttttaaaaa tatatgtgta
     5641 ggggcaaatc aatatttgcc ctcatgagta atatagggta ataccattcc actacaacaa
     5701 taatctaaat gtatgattga agcagataga atcatcagtg cctcgcctaa gcgtgaggaa
     5761 gaagttatag accgagcaat ccgcccgaaa ctgcttgccg actatgtcgg gcagccttct
     5821 gtgcatgatc aaatggagat cttcatcaaa gccgctaaat tgcgggaaga ggcattagat
     5881 cacttgctca ttttcggccc gcccggtttg ggaaaaacta cccttgccaa cattgtggca
     5941 aacgaaatgg gggtgaatat tcgcacaact tcagggccgg tgctggaaaa agcaggcgat
     6001 ttggcagcaa tgctgaccaa ccttgaacct tacgatgtgc tgtttattga tgagattcac
     6061 cgcctttctc cagcgattga agaagtgctt tatcctgcaa tggaagatta ccagctcgat
     6121 attatgattg gggaaggacc tgctgctcgt tccatcaagc tcgatctacc gccttttacc
     6181 cttgtagggg caaccacccg tgccggctca ctgacctcac cgttacgaga tcgttttggg
     6241 attgtacaac gcttagaatt ttactcagtg gacgatctta ctctgattgt caaacgcagc
     6301 gccgattgct taaatctcaa tttgtcggca gacggtgctt atgaagtggc tcgccgctcc
     6361 cgtggcacac cccgtattgc caaccgctta ctccgccgag ttcgggatta cgccgatgtg
     6421 cgtaataatg gcattattac ctcagacatt gccaaacaag ctctggcaat gctcgatgtg
     6481 gattcggaag gctttgattt tatggacatt aaactgttgc aagcgattgt agaacgcttt
     6541 gatggcgggc cagttggatt agacaatctt gcggcagcta tcggcgaaga acgagatacg
     6601 attgaagatg tgctagagcc ttatctgatt cagcaaggct ttctacaacg cacaccaaga
     6661 ggcagaattg ctaccagcag aacctatgcc catttaggta taacccaaat agattagtca
     6721 tatttctaaa ggcattgata cataaataaa aagcggatag ttagtactat ccgctttcat
     6781 ttgcaaaaaa tcaataaaat ttgaccgctt atccgctagg ctttttcagt ctcaaaacgc
     6841 tcaaaagcta atactctgct ttctaatttt ctgagaacga ttgtcataat gccggtaatt
     6901 accaagtaaa taacccctgc cataccataa attgataatg cgtcatactc tgtaccataa
     6961 agctggcgag catagcccat aatatccata atcgtaatgg ttgaagcaag cgatgtgcct
     7021 ttaaaaacta gcacaatctc attactataa gaaggtaaag cacgttttaa tgcgtaaggc
     7081 actaaaattt tcagtgtatc taaacggctc aaaccaaggg ctgcgcaagt ttcccattgc
     7141 cccttcggaa tcgcttttac cgcaccgtgg aacaacaatg tcgaataggc agcactgttt
     7201 aacgctaaag ccaacattgc acagaaccaa gcgtcggata ataataccca agccgcactt
     7261 tctgtaatcc attcaaattg ccccgggcca ctataaatca agaaaaattg aattaataaa
     7321 ggcgttccgg taaaaagcgt aataaatccg tttaccaacc actttaacgg acgattttct
     7381 aacgagagaa taaacgtaag aatgatcgct aaaataaagg caatgatgag cgccacaaaa
     7441 gtgagctgta ggctggtgcc aataccctgt gaaatttcaa ctaaataatc ccaccacatt
     7501 aagcaactcc tcgctcaaaa cgggtaaatc taccttctaa tactttaatc actcgctggc
     7561 taattagagt aatcgctaaa taaataagtg ctgctatccc ataccaagta aaaggttgat
     7621 gagtattagc attaattaac tccgattgac gcattaaatc atctacccca attaacgata
     7681 ccaatgccgt atcttttaac agcactaacc actgattgct taagcctggt aaagcgtgtc
     7741 gccagacttg agggagaata atgcgaacaa atacttgcgc tcggcttaac cctaacgccg
     7801 taccagattc ccactgccca actggaatag ctttaattgc accacgtaaa gattgggaag
     7861 cataagcagc aaaaataata cccagcgcaa tagccccaca ccagaaagca tttaactccg
     7921 caaactcatc ggtgatcaag aaaataactt ggataagacc aaaatagatc aaaaatacca
     7981 ctaaaatctc cggcaaccca cgcaataatg taattattat actagttggt ttacggatac
     8041 atgcaatctt actggtttca agtaccacaa aaaagattga caataacatt ccaatcaaga
     8101 ggcttgccag cgcaatccct aaggtcatca gggttgcgtt gacaagtaag tttaaaatat
     8161 cgctagacat tatttcccag ccatccaagt attataaatt tgctcatatt taccatttgt
     8221 tttgatggta gctaaagccg aatttaattt ttcaagcaat gcagtgttag atttatttac
     8281 cgcaatacca tatccattac caaaaaaggc tttatcgact actttttcac ccacgaaatc
     8341 taactctttt tcggttttta gccactctgc caatactggt gtatcaccaa ataccatatc
     8401 aacacgtcca ttttttaaat ctaacactgc tgattgtagg ctagcgtaag gttttaaatt
     8461 atattgtttg gcatttttgc ttaagtattg ttgaaaagtt gtaccatttt gcacgccgac
     8521 attcttagct gtttccggtg taaatttccc cttcattgcg acataactta ctgagttttc
     8581 taaataagca ttggtaaagg caacctgttt ttgacgcgct tcagtaatat ccatgcctga
     8641 aataattgca tcaaaatttt taaattttaa tcccgcaatt aagctatcga atgattgcgt
     8701 tttaaattcg caagttgctt ttagttcttc acataatgct tttgcaatat ctacatcaaa
     8761 gccaataact tcaccttttt catttgttgt ttcaaaaggg gcgtaagaag gctccatcgc
     8821 aaaagtgata gtttcttgtg cattggcaga aagcgttgca aatgcgatag cggaagctaa
     8881 taataatttt ttcattgttg tgtccttttg ttgttataga ttactctgag tgagataaat
     8941 attgagcaaa ttgctctgtt ttcggtgatt caaaacaact tgcatcacct tgttcaataa
     9001 ttgtaccttt ttccatgtac accactttgc ttgccacctt acgagcaacg cctacttcgt
     9061 gagtcacaat cacctgagta atgcctgtag attgcaattc tttaataata tcaactactt
     9121 gtgcagtaat ttccgggtca agtgctgcgg taggttcatc aaataataag acctgtggct
     9181 gcatcatcag tgctctggca atcgccaccc gttgttgctg accacctgaa agatgcagtg
     9241 ggaaacgctc ggcaaactcg ctcaaacgca aacgtgccaa atgtcctttt gctctggcaa
     9301 ccgcttcttc tttgcttaac ccaagcactt tcatcggggc ttcaattaag ttttgcatta
     9361 cggttaaatg cggccataaa tgatactgct ggaacaccat tcccacctca cggcgtaaca
     9421 aactcaccgc tttgctgtcg gttttagcag ttaaatcaaa ttgatgattt gcaatcgcca
     9481 aagtgcctga ttgcggtact tccattaagt ttaaggttcg aattagggta cttttacctg
     9541 ccccactcgg gccaagcaat acaacagtat cccctttttc aatctctaag ttaatgtcaa
     9601 ataaggcttg gtttgagcca taaaaaaaat tgacattttg aatacgaatt gccattcgtt
     9661 aaaatccta
//
LOCUS       DANLTI010000102         9660 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.102, whole genome shotgun sequence.
ACCESSION   DANLTI010000102 DANLTI010000000
VERSION     DANLTI010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9660
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.102"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..645
                     /locus_tag="PXB09_002012"
     CDS             <1..645
                     /locus_tag="PXB09_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5234093.1"
                     /translation="KQQVLDAFHFRSACRSYDPNKKINKEDMDYILELGRLSPSSVGS
                     EPWKFLVLQNPETRQKIAPVSWGIKHPMEEMSHLVVILTKKNVRYDSVYMRDMLAKRG
                     LTYEQIEASLVRYKSFQEEDMKLLSERELFDWSTKQTYIALGNMMTGAALIGIDSCPI
                     EGFHYDTVNQILSDEGLFDLNEYGVSCMITFGYRNKEIKKKSRKPTEEVIAWIE"
     gene            complement(705..2030)
                     /locus_tag="PXB09_002013"
     CDS             complement(705..2030)
                     /locus_tag="PXB09_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDL5234094.1"
                     /translation="MLIFNLIVFAAILFLLAKIYKSTQKLGQTVFIGLFLGLASGAFL
                     QTFYEKATVDATLDWINLIGNGYVRLLQMIVMPLVFVSILSAITRLKEAGSLGKISFS
                     VLSVLLVTTAIAAAIGIALVYLFDLSAEGLVAGSRELAAQEKVVGRVEQVSNLSVPSM
                     LLSFIPKNPFLELTGANPTSIINTVIFSALLGIAALSLGKEDKALGERIAQGVETLNK
                     LVMRLVRFVIRLTPYGVFALMIKMAATSQWSDIVNLGSFIVASYIAIGLMFIVHGILL
                     FVAKINPLDYYKKVLPTLSFAFTSRSSAATIPLNIETQTNKLGNNSVIANFSATFGAT
                     IGQNGCAGIYPAMLAVMVAPTVGMDPFSLNYILTLILVVAISSFGIAGVGGGATFAAI
                     VVLSTLNLPIELVGLLISVEPIIDMARTALNVNGAMVAGTLTNKWVKAE"
     gene            complement(2131..2883)
                     /locus_tag="PXB09_002014"
     CDS             complement(2131..2883)
                     /locus_tag="PXB09_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon-containing protein"
                     /protein_id="HDL5234095.1"
                     /translation="MYQAIVHFSYHNFEQDPVTAISQILNQWLYNGQVIGREMPITFH
                     QNEFQARVCVPTQESLLPQYNSDEVNEALQQAVEIGVIFASFELVGRDYQGEESSHNR
                     SPAFQILYTTHLDTCSPLYDGEQFAPIPLYSLQDQSLSEAILEWQQNWQACDLLQMNG
                     NLLECHALVQISDETSDLAMIGRDLCQQIEQKTHIPTFYYLYRLGRDESEYQRKCPCC
                     GGEWKLTEPLHDIFHFRCEPCRLISNLSWELL"
     gene            complement(2883..3788)
                     /locus_tag="PXB09_002015"
     CDS             complement(2883..3788)
                     /locus_tag="PXB09_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDL5234096.1"
                     /translation="MNEKYSKLVKNAANLAIIVAILLIVIKAFAWWKTGSISILAAMT
                     DSVVDLFASLTNILVLRFALQPADENHAFGHGKAESLAALAQSAFISGSAVFLLLQGF
                     HKLTNPELIAQSSIGVIVSIVSIVITALLVFYQRYVVTLTKSPAIEADSLHYQTDLLM
                     NAAILVAMLLNSAGFVYADAVFAIGIALYIAFNAVKMFWCAVQTLLDQALPDEEIERI
                     KEIASQHPNILGIHDILTRRAGAVRFIQLHLELDDHLTLLVAHEITDSLEQKLLAAFP
                     MSHVIIHQEPTTVVKQEFQDMAENI"
     gene            complement(3797..4360)
                     /locus_tag="PXB09_002016"
     CDS             complement(3797..4360)
                     /locus_tag="PXB09_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATPase"
                     /protein_id="HDL5234097.1"
                     /translation="MSAIKKGITLVALSLAGCVSQSPQFAVPDAIHFGQDTFVKVTHS
                     QIDEMQHLLYLPEKSEKNPENWQKGILFFLDKNSKNQTLEQRAAFRQASFAKKPELEA
                     KVEIQQNELHSSVIYPPIERFNNVMLEVTRGRNLACGYGQIQFADKREVGKTVAKKSP
                     NLTAYSQEIARLSLELNQLGWQVQCSK"
     gene            complement(4360..5136)
                     /gene="yaaA"
                     /locus_tag="PXB09_002017"
     CDS             complement(4360..5136)
                     /gene="yaaA"
                     /locus_tag="PXB09_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDL5234098.1"
                     /translation="MLAIISPAKTLDFKTNIDGFAFSQPNLTACSQELIDICKQLSPA
                     ELGSLMSISDKLAALNVARFAEWQLEHNEQNAKAALFAFKGDVYTGLEAETLSKAQVE
                     YAQQHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNIITENLQQAID
                     EQGDDILVNLASDEYYGAVKPQNLNATIIKPVFLDEKNGKYKVISFYAKKARGMMVRF
                     ILDTQPTSIEQLKQFNYGGYWFDADSSSESELVFKREEQA"
     gene            complement(5325..7045)
                     /gene="ltrA"
                     /locus_tag="PXB09_002018"
                     /pseudo
     CDS             complement(5325..7045)
                     /gene="ltrA"
                     /locus_tag="PXB09_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341372.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            complement(8727..9122)
                     /gene="rpsI"
                     /locus_tag="PXB09_002019"
     CDS             complement(8727..9122)
                     /gene="rpsI"
                     /locus_tag="PXB09_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDL5234099.1"
                     /translation="MTAANQNYGTGRRKSSSARVFIKPGSGNITINQRSLEVYFGRET
                     ARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAA
                     GFVTRDARRVERKKVGLHKARRRPQYSKR"
     gene            complement(9139..9567)
                     /gene="rplM"
                     /locus_tag="PXB09_002020"
     CDS             complement(9139..9567)
                     /gene="rplM"
                     /locus_tag="PXB09_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDL5234100.1"
                     /translation="MKTFVAKPETVQRDWYVVDATGKTLGRLATELARRLRGKHKPEY
                     TPHVDTGDYIIVINADKVAVTGKKQTDKIYYWHTGYVGGIKDATFKEMIARRPEAVIE
                     IAVKGMLPKGPLGREMFRKLKVYAGSEHNHQAQQPQVLDI"
BASE COUNT         2751 a         2166 c         1784 g         2959 t
ORIGIN      
        1 aaacagcaag ttttagacgc ttttcacttc cgttcggcct gtcgcagtta cgatccaaac
       61 aaaaaaatca acaaagaaga tatggattat attttggaac tcgggcgtct ctcaccaagc
      121 tctgtcggtt ctgaaccgtg gaaattttta gtgctacaaa acccggaaac ccgtcagaaa
      181 atcgccccgg tttcgtgggg aattaaacac ccaatggaag aaatgagcca tttagtggtg
      241 attttaacca aaaagaatgt ccgttatgat tctgtctata tgcgtgatat gttagccaaa
      301 cgaggcttaa cctatgagca gattgaagcc tcgctggtac gctataagtc gttccaagaa
      361 gaggatatga aattgcttag tgaacgtgaa ttattcgatt ggagtaccaa gcaaacctat
      421 attgcattag gcaatatgat gaccggtgcg gctctgattg gtattgactc ttgcccgatt
      481 gaaggttttc attacgatac cgtaaaccaa attttatcgg acgaaggctt atttgaccta
      541 aacgaatatg gtgtgtcttg tatgataact tttggctatc gcaacaaaga aattaagaaa
      601 aaatcccgca aacctaccga agaagtgatt gcgtggattg aataatcacc ttaacttata
      661 aaaacgggcg aattaatcgc ccatttttat atctttagtt ttgactactc ggctttcacc
      721 catttattgg ttaatgtgcc cgccaccatt gcaccattca cgtttaaggc ggtgcgagcc
      781 atatcaataa tcggctcaac tgaaatgagc aagcctacta actcaatcgg cagattcaag
      841 gttgatagca ccacaatcgc cgcaaaagtt gcaccaccac ctacaccggc aatgccaaat
      901 gaggaaattg ccaccaccaa aatcaaggtt aaaatatagt ttaagctaaa cggatccatt
      961 cccactgttg gagcgaccat caccgccaac attgccggat aaattcccgc acagccattt
     1021 tgcccgatgg ttgccccaaa ggttgcagaa aagttggcaa tcacactgtt attacctaat
     1081 ttattggttt gcgtctcaat attcaacgga atggttgccg cactggaacg agacgtaaaa
     1141 gcaaaactta atgtcggcaa cacttttttg tagtaatcca acgggttgat tttagccaca
     1201 aagagtaaaa taccgtgcac aataaacatc aaaccaatcg caatgtatga tgccacaata
     1261 aagctaccta aatttacaat atcgctccat tgagaagttg ccgccatttt gatcatcaac
     1321 gcaaatacgc cataaggggt taggcgaatc acaaaacgta ctaaacgcat aaccagttta
     1381 tttaaggtct ctacaccttg tgcgatacgt tcgcccaacg ctttatcttc tttgcctaag
     1441 ctcagtgcag caatgcctag cagagccgag aaaataaccg tgttgatgat cgacgttggg
     1501 tttgcaccgg ttaattctaa aaacggattt ttcggaatga aagaaagcaa cattgaaggc
     1561 acagataagt tgctcacctg ctccacacgc cctaccactt tctcttgagc ggcaagctca
     1621 cgggagccgg cgactaaacc ctcggcagat aaatcaaaca gatacactaa agcaatacca
     1681 atcgctgcgg caatcgcggt ggtcactaat aacactgata gcacactaaa actaattttg
     1741 cctaaagatc ctgcctcttt taagcgggta attgccgata aaatagagac aaacaccaat
     1801 ggcattacga tcatttgtag caagcgaaca taaccgttac caattaagtt aatccaatca
     1861 agagttgcat caacagtagc tttttcgtaa aaagtttgca aaaaagcacc gcttgcaagc
     1921 cctaaaaata acccaataaa cactgtttga ccgagttttt gcgtagattt ataaatttta
     1981 gccaataaaa ataatattgc cgcaaagaca attaagttga aaataagcac agaacctcca
     2041 aagtaaaacc gcttattata aaaatgccgc aagggtatta cgcttgcggc attcattcaa
     2101 gatgatttat tactttggta taactaaaag ttataataat tcccagctta gattagagat
     2161 caaacggcaa ggctcacatc taaaatggaa aatatcgtgc aacggctcag ttaatttcca
     2221 ttctccgcca caacaagggc atttgcgttg atattcactt tcatcacgcc ctaaacggta
     2281 gaggtaataa aaggtgggaa tgtgagtttt ctgctcaatt tgctgacata gatctcgacc
     2341 gatcattgca agatcgcttg tttcatcact aatttgaaca agtgcgtggc actccagcag
     2401 attgccgttc atttgtagca gatcgcacgc ttgccaattt tgctgccatt ccaatatcgc
     2461 ttcgctaaga gactgatcct gtaaagaata aagcggaatt ggggcaaact gctctccatc
     2521 ataaagtggc gagcaggtat ctaaatgggt ggtatataat atttgaaacg ctggcgagcg
     2581 gttatgactg ctttcttcgc cctgataatc tcgcccgaca agctcaaaac ttgcaaaaat
     2641 tacgccgatt tcgaccgctt gttgcaacgc ttcatttact tcatcactat tatattgtgg
     2701 caaaaggctt tcttgtgtag gcacacaaac ccgagcttga aactcgtttt gatgaaaagt
     2761 aatcggcatt tctctgccaa tgacttgccc gttatataac cattgattta agatttggct
     2821 aattgccgtc accggatctt gctcaaaatt atgatagctg aaatgcacta tcgcctgata
     2881 cattaaatat tctccgccat atcttgaaat tcttgtttga ccaccgtagt cggctcttga
     2941 tgaataatca cgtgagacat cggaaatgcc gccagcaatt tctgctcaag gctatcagtt
     3001 atttcgtgag ctactagcag cgttaagtga tcgtctaatt ccaaatgtaa ttggataaaa
     3061 cgcactgcac ctgcacggcg ggttagaata tcgtgaatcc ctaaaatgtt cggatgttgc
     3121 gaagcaatct ctttaatccg ctcaatttct tcatcgggca aagcttggtc tagcaaggtt
     3181 tgcaccgcac accaaaacat ttttactgca ttgaaagcaa tgtagagggc aatacctatt
     3241 gcaaaaactg catcggcgta cacaaaaccg gcactattaa gcaacattgc cactaaaatt
     3301 gccgcattca ttaataaatc agtttggtaa tgtaacgaat ccgcttcaat cgccggactt
     3361 ttcgtaagcg tgacaacata acgctgataa aagactaaaa gtgcagtaat cacaattgat
     3421 acaatactga caattacccc aatactcgat tgagcaatta attccggatt ggtgagttta
     3481 tggaaacctt gtagcagtag gaaaaccgcc gagccggaaa taaacgcact ttgggcaagt
     3541 gccgccaaag actccgcttt gccgtgccca aacgcgtgat tctcatctgc cggttgtagt
     3601 gcaaaacgca gcactaaaat attggttagc gaagcaaaca gatccactac cgaatccgtc
     3661 attgctgcca agattgaaat cgaaccggtt ttccaccatg caaaggcttt aatcacaatc
     3721 agtaagatcg caacaataat cgctaaattc gctgcatttt tgactaattt gctgtatttt
     3781 tcgttcattt actacattat ttactgcatt ggacttgcca acccagttgg tttaattcaa
     3841 gagaaagtct agcaatttct tggctgtaag cggtcaaatt cggcgatttt tttgcaactg
     3901 tcttgccaac ttcccgctta tctgcaaatt gaatctgccc gtaaccacaa gctaaattcc
     3961 gcccacgggt tacttctaac atcacattgt taaaacgttc tataggtgga taaatcacac
     4021 tgctgtgtaa ttcattttgc tgaatttcca ctttcgcctc aagctccggc tttttcgcaa
     4081 aacttgcttg gcggaatgca gctcgttgct ctaaggtttg atttttactg tttttatcta
     4141 agaaaaataa aatgcctttt tgccaatttt ccggattttt ctcactcttt tctggcaaat
     4201 aaagtaaatg ttgcatttca tcaatttggc tgtgggtgac ttttacaaaa gtatcctgcc
     4261 caaagtgaat agcatcaggc actgcaaatt gtgggctttg gctgacacaa cctgccaatg
     4321 ataacgcaac caaagttatt ccctttttga tagccgacat tatgcctgct cctcacgttt
     4381 aaagactagc tcgctttcac tagaactgtc tgcatcaaac caatagcccc cgtagttaaa
     4441 ctgtttgagc tgttcgatgc tagtcggttg ggtgtctaat ataaagcgaa ccatcattcc
     4501 acgggctttt ttggcataga agctgatcac tttatattta ccgtttttct catctaaaaa
     4561 caccggcttg ataatagtcg catttagatt ttgtggctta accgcaccat aatattcatc
     4621 agaggcaaga ttaactaaaa tatcatcgcc ttgttcatca atcgcttgct gcaaattttc
     4681 agtaataata ttgccccaga aagcataaag atctttgcct ttcggattgg ctaacttagt
     4741 gcccatttct aaacgataag gctgcattaa atctaacggc tttaataaac catacaagcc
     4801 tgaaagcata cgcaaatgtt gttgagcata ttcaacttgt gctttgctta acgtttctgc
     4861 ctctagtccg gtataaacat cacctttaaa ggcaaagagg gcggctttgg cattttgttc
     4921 gttatgctca agctgccact cggcaaagcg agccacattt aaagcggcta atttatcgct
     4981 aattgacatc aaactaccta attcagcagg tgaaagctgt ttacaaatat caattaattc
     5041 ttggctacaa gcggtcaaat ttggttgaga aaatgcaaaa ccgtcaatat tggttttaaa
     5101 atcaagggtt ttggcagggg aaataatggc taacataaat gcctctatca aatagttaat
     5161 cagggcggtt attctaccac agtcataaag acaaaaaagg caggaaaccc tgccttcttg
     5221 aaaacgaaaa gaaaagtcgg gtagcgaaag tacattactg cacctccgcc ccctaagaac
     5281 tgtacaagca aatttctctg catacagctc aagcctttca tcagctatat agccggcttc
     5341 acgacctcca agttcaaagt atgaatcttt atgtgacaag tcggatgtac caaacaacga
     5401 ttgcttaatg catcgcttcc tcctaacatt ttgtacacga tatgatgatc gtgccagcct
     5461 gtttctttgg ttattggcaa cccacataat gcacattttc cacgctggtc tttatacagt
     5521 gcctgccatt gtcgtctgtg tgattgttct tcatacagac gttcttggct cagtttttcg
     5581 ccgtacaact cccattcagg caaaaacgga ttatattcag acttaatttt aacgtgtcgt
     5641 ttgattttaa catagccaca atagaataag tctatcggct tagtttctcc tttttcattg
     5701 gtataaactg tgccaaatac ccaatttcga gtcgctgtgg tacaaaagta tttctctttt
     5761 atccacataa tacctttatt gtgatgacgg cgttcacacc atttccaaag tactttccaa
     5821 actaatgcgt ccattcgtcc gaatgcctta cttgcaactt ggcttcgatg ataatttgcc
     5881 caacctcgta acattgggtt tagcaccatt ataagatctt cctgtttagc cattttcatt
     5941 tagaaattac ctcttttacc ttgttgtaga acgctttcac attcttttga cttggtctgt
     6001 tcagtatttt tcctttgaaa cgtctcacat tccaacctag aaaatcaaaa ccttcttcaa
     6061 tatgtaccac tttcgtcttt tctgttgata aggataaacc tcgttcattc agaaagttct
     6121 ggataagtgg gataacttga ttttcaagta actctttcgt tttacctgat atgataaagt
     6181 catctgcata acgtactaag taagttttat tttctcgaat tgtccgactg ccttttcctc
     6241 caaaatgagt ttctaacagt ttttccaatc catctaatgc catatttgca agcgttggcg
     6301 agataatccc accctgtggt gtaccttcct ctgttcgttt caaccgtcca aattccacta
     6361 cacctgattt tagccatttc cgcaatatcc gtttattcat tggaatatgc tttaatagcc
     6421 agtcgtggct tatgtggtca aaacaacctg caatatccgc atcaagtacc cactcaacag
     6481 gttgattagt tttcttgcct ttatgcgaat aaatttagtg tatatgagta atagcatcta
     6541 ccgttgaacg gtttaatcta aatccataag aacctttatc cgcagttgtt tctgccacag
     6601 gttgtattgc caataaataa agggcttgca ttgctctatc tcgcattgtt ggaataccca
     6661 acggacgttt ctttccattc ggtttgggga tatacactcg tcttaatgga ctaggtttat
     6721 accctttttc cgtcaatgat agtgcggctt gccattttgt ctctggggtc tcccaaagct
     6781 ctttatcgac accacttgtt cgcttacctt gattttcagt cactcttctt actgcaacta
     6841 atttagcata atgtgagtgg gttagcattc gttgtaagtt tttaacctta cgccaattgc
     6901 cttccagtgt tgccttcgca atccgaattt gcattccttt cacatacgtt tcagctttat
     6961 gccaatcgac ataatgccat ttggagatgt gcgaggtcgc tggattgcaa gctaactttt
     7021 cagtataatg cttacgctct ttcataccta cctctgatat tacaagataa gtcgaaagtc
     7081 tcagcaagtg ggtagatcct tcaagtaaac aaatccctat tgagataaac tatccttagt
     7141 ttattccctt tggttacaag aggatcttac cgttttaccg ataatttcaa ccgctcttgt
     7201 aaccgattgg gttaaagagt cgagcgctag gttatgatga gcctaacgct catttcttta
     7261 atttgttttt gtacctattc aacattgtat tccttgataa cattcaattt ctcttctgtt
     7321 atctacaatc tctttcggtg ttacccttaa aggaaacgct attcatctta cgatgaaaga
     7381 ccagttagaa gtctgcaccc tttcgggtta ggctatgttt cacaccctat ctatgccatt
     7441 acagcatagc attcgctttt tctaacctcc cttacctgca ttcccaacag tatcgcttac
     7501 gctttacttg ccttttcctc ttttaccttc gccatctatt tcaaacggtt tgagtattgt
     7561 gggcaaggca gaaatacagg cttaccaagt tccattacta tcacacgagt agtgaagata
     7621 cagtctctcc cccgacagtg ctttgatggc gtatcctcac gttaaagaag aataaccgac
     7681 tgcctacctt ttggtcagag cctatcaata gctttggctc tctctcgata acgaggttta
     7741 tcaactgttc acttacgttt atctttctac ccagtctagc cccttgaagg tgtgctattc
     7801 actttctccc aatgtcctct cacgatttca ttgactgatt ttcatcaggg gttcattgtc
     7861 aggaagctcc gcaccacacc gttaccggtg tcgcactatc cctagactac tgttagccat
     7921 ataacaggtt accttatcat tccctccgta ctactcatat cttcggattg tttgaccgta
     7981 acaatgacag taatagctta cgcatactta ctaagtcagt atcctatact gcataaataa
     8041 gtccgaacct ttacaaaata aattcactta tgcgactaaa gtcgctttgt ctatatccaa
     8101 attttcccgc aaatagccta taacctgtcc aataggcgaa ggtagctaac cctagctaat
     8161 gtgagtatta gaggtgattt taacgagaat ttaaggtata attatcccta gctcataaaa
     8221 acgaataaac aagagtttat ccttagtgtt tttattcact attgaggagc attctacgat
     8281 taccgtagat tgcgagtgtg aaaagtataa gtaaagatgg cactccttcc ctaagattta
     8341 ccaagtctta gttctgatgt cttttctgag tgctgaggcg atctattgga ctttatttat
     8401 agtaggtgtt gtaaattttc tctgctctgg ggtatgggta actccggtct gcggatcttg
     8461 ctttcttact ctatcttggt attaagaaaa aaaccaagta catcaaagtg aagatcatac
     8521 cttacagcct ttcgagttgg ttcatttact ttcccaactt agaacaagag tgcttgggca
     8581 aagccccttt tctcttgcct gtctttccaa gcactccgaa gagtgcttgg aaagtcggaa
     8641 gcaggtgata agaataccac ccacttccag caataactcc ttgatatata aggagttatt
     8701 gccataagta cgacaacttg tcgcacttaa cgttttgagt attgtggacg acgacgtgct
     8761 ttgtgtaaac ccactttttt acgttcaacg cgacgtgcgt cacgagtaac gaagcctgct
     8821 gcacgaagtg ctgggcgtag cgtttcatcg tattccatta atgcacgagt gataccgtga
     8881 cggattgcac ccgcttgacc agaaatacca ccacctttaa cagtgatgta aaggtctaat
     8941 ttatcagtta attcaaccaa ttctaacggc tgacgtacga tcatacgagc tgtttcacga
     9001 ccgaagtaaa cttcaagtga acgttggttg atagtaatgt tacctgaacc cggtttgata
     9061 aatacacggg ctgaagagct tttgcggcga cctgtgccgt agttttgatt tgctgctgtc
     9121 atttttatgc tccgtgaatt agatatctaa aacttgtggt tgttgtgctt ggtgattgtg
     9181 ttctgaacct gcgtaaactt ttaatttacg gaacatttca cgaccaagtg gaccttttgg
     9241 taacatacct ttcactgcga tttcaatcac agcttcagga cgacgagcaa tcatttcttt
     9301 gaaggttgca tctttgatgc cacctacata gccagtgtgc cagtagtaga ttttgtcagt
     9361 ttgtttttta cctgttactg ctactttgtc tgcattgatc acgatgatgt aatcaccggt
     9421 atcaacgtgt ggagtgtact caggtttatg tttaccacga agacggcgtg ccaattcagt
     9481 cgctaaacga cctaatgttt tacccgtcgc atctactaca taccagtcac gttgtactgt
     9541 ttctggtttt gctacaaaag ttttcattaa ttaaatacca aatttaaagt ttaaaaccca
     9601 atacctcatt gaggtatttc ctattatttt acggtgaacc cgaccccttc gagtctgatt
//
LOCUS       DANLTI010000103         9525 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.103, whole genome shotgun sequence.
ACCESSION   DANLTI010000103 DANLTI010000000
VERSION     DANLTI010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9525
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.103"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..363
                     /locus_tag="PXB09_002021"
     CDS             <1..363
                     /locus_tag="PXB09_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234101.1"
                     /translation="VQAELKYSGSNIPSEYSKFNLENVLIDFPNKTNSVAYQNLVIHN
                     AKTRAGKLKTQYANAHDLGNLVLVEDIQKIFSGLLEIIYQVRCHLVHGSLSPTPENHE
                     VVKYCYLILWDCLKGFCD"
     gene            complement(631..1368)
                     /locus_tag="PXB09_002022"
     CDS             complement(631..1368)
                     /locus_tag="PXB09_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5234102.1"
                     /translation="MIKIENLTLAHGIQHLSCYLPKGKLIGIMGANGAGKSSLLKAIA
                     GILRPTSGEIWLENCKLHALSAVERSRQFAYLAQQLNVAWQLSVYDVIALGLPAPLPP
                     EQERQKVRSVAEQLAISHLLDNTYQQLSGGEQTRVQLARCLMKQAPILLADEPIAALD
                     PYYQIDIMQQLKALTPTQTCVVVIHHLPLAYRFCDEIILLKNGNLLVSGNTQAVLNAE
                     NIATAFGVKAEMDWEKREMWGIEKLEV"
     gene            complement(1365..2333)
                     /locus_tag="PXB09_002023"
     CDS             complement(1365..2333)
                     /locus_tag="PXB09_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5234103.1"
                     /translation="MKKLNIVLGSLLLLIVSNAAFYQLSDFALLKNAEGVLSDLRWLV
                     LGEIRLPRIGLAVLTGASLALAGNAMQGVFKNPLASPGLLGSSSGATAVSVFLLYYFS
                     APMGWLLFGGVAGALGAFLLVWLISFRHGTTMMILSGVAVNVLLGAAVTLLLSNAESP
                     WALAELYRWLQGSLVWATAEAVCWALPLILLGIVCLYRERRYLDLLTFGEETAATMGI
                     NLQRSFFTVSIGVALLVGATIPQTGTIGFIGLIAPHLARIWLKKPPSQLYLTSALIGA
                     LLLLIADLAVQYVPFFARIYIGTLTAILGVPFLIWILFTQQWRLAQ"
     gene            2514..2849
                     /locus_tag="PXB09_002024"
     CDS             2514..2849
                     /locus_tag="PXB09_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5234104.1"
                     /translation="MYHIERTEIFDQWLENLKDPLAVVTIARRIERAESGNFGDTKYI
                     AEGISEMRLNVSKGYRLYYAQKGSIIYILLNGGHKGTQQADIDKAKMLWAEIKQHMAE
                     QEKKNERII"
     gene            2833..3156
                     /locus_tag="PXB09_002025"
     CDS             2833..3156
                     /locus_tag="PXB09_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5234105.1"
                     /translation="MNELYDAPIPQATREKFGIQPFDAAEYLANDELIALYLAETLKD
                     GTDEEFIQALNTVARAKGMNELAKKAGIGRESLYQSLSSSKPRFETIRKIISALNLEL
                     SVVKA"
     gene            complement(3146..5032)
                     /locus_tag="PXB09_002026"
     CDS             complement(3146..5032)
                     /locus_tag="PXB09_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5234106.1"
                     /translation="MTQLDSVTVYSAYATPINQDKTASSVTVLTEKDFAARNATYVSD
                     VLKTVPGVAIGQQGGRGTLTSLFLRGAESRHTAVVIDGVKVNPINIGNFDFGGLPISN
                     IERIEVLRGEQSALWGSSAMGGVVYITTKSGLYKEKPFNAEVDLGLGSNNTRDASATL
                     SGFHNGFYYALHGDSHRTKGISALSKNHFSYTTETGSEVKTGGASERDGFHRDNGSLR
                     LGYDLGNKGVEVLAAQSSQTVHIDGYNSDVSGEYSRTRNQTFKLGGYWGNEQELLKHQ
                     ANISQFNSKATHFGSNARYSNEKQLNANYQLDVNFDREGEVTQAVSLLTDYAKTRYTS
                     DKYLREKTLSEKSAALEYRLFTEQDHSFSISGRYTDNSQFKNSITGRISGAYRLSPNL
                     CSDRLLLELAEPQQIRAMSPYSQKPLMMLDKLNTDKPTVEPELTALLPYADSTILLNE
                     TFYPQLTARLKQLGFKLVALNDSPQTPEQLFTLILQLGELTQNQAKAEKLVERLRLQK
                     IPLKQPLAETLILSETGMIEPHFPQYQTLLDLLGLSPLKSDLTPQNFSLEKLLLAQPK
                     QLLFLTDNQSYNNQAELLKHPALQKIWQKMSQNPPLVLPMKYTYCFDHGVWQGIQLMH
                     KLTP"
     gene            5062..5862
                     /gene="metF"
                     /locus_tag="PXB09_002027"
     CDS             5062..5862
                     /gene="metF"
                     /locus_tag="PXB09_002027"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDL5234107.1"
                     /translation="MQQKWRMLWDSIDRLSPLKPKFVSVTYGANSGERDRTHSIVKSI
                     QEKTGIISAPHLTGIDATPEELKVIAKDYWDSGIRRIVALRGDIPKGYDKALFYASDL
                     VALLKSVADFDISVAAYPEVHPEAKSAQADLLNLKRKIDAGANHVITQFFFDVESYLR
                     FRDRCVSIGIDCEIVPGILPVTNFKQLQKMAAVTNVKIPTWMGKMYEGLDDDQTTRNL
                     VAASIAMDMVKVLSREGVNDFHFYTLNRSELTYAMCHTLGVRPDLTTA"
     gene            complement(5911..7071)
                     /locus_tag="PXB09_002028"
     CDS             complement(5911..7071)
                     /locus_tag="PXB09_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234108.1"
                     /translation="MKKSILLILSLFSASLFADVQLSPLPLPQIGKVSQFDLSEQGEL
                     VVINQQKQLWRVTQQAQKLADGVSTEIEPKAQYQRIALADQNGHFMLWTADKIYTSNI
                     PLAPKATMTALNFATIAVTKQNGQFKLARIETQGNQATITATAETEVLPDAHPLQIDF
                     DAETPNQGHIAVLAKPDDFTYQHGVLGDDVEAGEIQFLERHTLNPLAEKLTQQGRVFE
                     ANRWATFTENGKTKIVSVISGDGNGASTVVIGVKDGKLSIEAESEPLSTNRWQSPFIF
                     NRKLYAIQMPHLKGNLVEYSLKGNQLAERFITSGLSNHRYGDHETNLVATTETFALIP
                     QMGYQQVVVLDKTGKITELPTALPAGIKQTKADSNKAYLLLKNGEIWVAEEK"
     gene            complement(7131..8147)
                     /gene="galE"
                     /locus_tag="PXB09_002029"
     CDS             complement(7131..8147)
                     /gene="galE"
                     /locus_tag="PXB09_002029"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDL5234109.1"
                     /translation="MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERV
                     KQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGESVREPLRYYQNNVT
                     GSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERIL
                     EDTVKAFPQLSAVVLRYFNPVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVF
                     GGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAF
                     EAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPN
                     GYKG"
     gene            complement(8235..8396)
                     /locus_tag="PXB09_002030"
     CDS             complement(8235..8396)
                     /locus_tag="PXB09_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDL5234110.1"
                     /translation="MNETLLNNLVCPVSNEKLEWDKENNRLINPKLNIAYPIKNGIPE
                     LLPEAGVAL"
     gene            complement(8374..9375)
                     /gene="lpxK"
                     /locus_tag="PXB09_002031"
     CDS             complement(8374..9375)
                     /gene="lpxK"
                     /locus_tag="PXB09_002031"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDL5234111.1"
                     /translation="MKIWQTKSLITWLLSPLSLLFWLISQARKRLYSLNILQSYRSPL
                     PMLVVGNISVGGNGKTPVVVWLVEQLQQRGVKVGVISRGYGGKAKTFPQLVTRESSAE
                     MVGDEPVLIVQRTNVPLAISPNRQQSIELLLNQFEPDIIITDDGLQHYALQRDMEWVV
                     VDGVRRFGNGFVLPAGGLRELPSRLNSVQAVICNGGTPQANEHLMTLEPSDAINLVTN
                     QRKPLSEFTQPCVAIAGIGHPPRFFTMLEKLGIPLAKTQGFADHQAFDKAQLAQFADS
                     QTPLLMTEKDAVKCHDFAQPNWWYVPVSATFSEKSTACLLAPILQKLGKEDERNTTQ"
     gene            complement(9377..>9525)
                     /locus_tag="PXB09_002032"
     CDS             complement(9377..>9525)
                     /locus_tag="PXB09_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5234112.1"
                     /translation="GNGVEEIQRLQLIISHKDELLAHKEEIIENQKRELALLRDLVET
                     LKNK"
BASE COUNT         2611 a         2072 c         2114 g         2728 t
ORIGIN      
        1 gttcaggcag agttaaaata ttcaggtagc aatattccaa gtgaatattc taaatttaac
       61 ttggaaaatg tgcttattga ttttcctaac aagacaaatt ctgtagcata tcagaatcta
      121 gttattcaca acgcaaaaac gcgtgcagga aaattaaaaa cacaatatgc aaatgctcac
      181 gatttaggca atttggtttt agtagaggat atccaaaaaa tattttccgg gttattagaa
      241 ataatttatc aagttcgttg ccatttggta catggtagct taagtccaac acctgaaaac
      301 cacgaagttg ttaaatattg ctatttgatt ttgtgggatt gtttaaaagg attttgtgat
      361 tagttattgt caataaagct acaagcggtc aattctccca aaactttgca aatttccccg
      421 caaaactgac cgcttgttct cctctatcca ttcacctcaa ccaacttttc tctctacccc
      481 tactcaaaat cggttaaaca atctgttgag gtaaatgttg tgtcggaatg ggatttaatc
      541 ttaatgaaac tgaaaaaatc ttctgccaag caaatttccc taaaattgga agttcatttc
      601 caatttctca aaaaatcacc caaaccggaa ctacacttcc aatttttcaa tcccccacat
      661 ttcccttttc tcccaatcca tttcagcttt caccccaaaa gccgttgcaa tattttcggc
      721 atttaagacc gcttgtgtgt tgccgctgac gagtaaattg ccgtttttaa gcagaatgat
      781 ttcatcacaa aaacggtagg caaggggcaa atgatgaatc accaccacgc aggtttgtgt
      841 tggagttagg gctttgagct gctgcataat atcgatttgg tagtaggggt cgagggcggc
      901 aatcggttca tcggcaagca agatcggggc ttgtttcatc aaacaacggg cgagttgcac
      961 tcgggtctgt tcaccgccgg agagctgttg gtaagtgttg tccagcaggt gagaaatcgc
     1021 caattgttcg gcaaccgaac gcaccttttg acgctcttgt tcaggcggaa gcggtgcggg
     1081 caagccgagt gcaatcacat catacaccga aagttgccac gccacgttga gctgttgggc
     1141 gaggtaggca aattgtcggc tcctctcaac ggcggaaagg gcgtgcagtt tgcaattttc
     1201 cagccaaatt tcaccgcttg tcgggcgtag aatgccggca atcgctttga gcaacgagga
     1261 tttccctgcc ccgtttgcgc ccataatgcc gatcaatttg ccttttggca gatagcaaga
     1321 gaggtgttga ataccgtggg caagggtgag attttcaatc ttgatcattg tgccaatctc
     1381 cattgctggg tgaataaaat ccaaatcaaa aacggtacgc ccaaaattgc cgtgagcgtg
     1441 ccgatgtaaa ttcgggcaaa aaacggcaca tattgcaccg ccagatctgc aatcagcagt
     1501 aacaacgccc cgattaaagc ggaggtaaga taaagctggg acggcggttt tttcagccaa
     1561 atacgggcaa gatgaggggc tatcaagccg ataaaaccga tggtgccggt ctgtggaatc
     1621 gttgctccga ccaacagcgc cacgccaatg ctaacggtaa aaaaactgcg ttgcaggttg
     1681 atgcccattg ttgctgccgt ctcttcgcca aaggtgagca ggtcgagata acgccgttcc
     1741 cgatagaggc agacaatgcc gagcaagatc aacggtaacg cccaacatac tgcctctgcg
     1801 gttgcccaga ctaatgagcc ttgcaaccag cggtagagtt ccgccaacgc ccacgggctt
     1861 tcggcattgg aaagcagtaa agtcaccgct gccccgagca acacgtttac cgccacgcca
     1921 cttaaaatca tcattgttgt gccgtggcga aagctaatca gccacaccag caaaaatgcc
     1981 cccagcgccc ctgccacacc gccaaacagt agccagccca tcggggctga aaaatagtag
     2041 agcagaaata cgctcaccgc cgttgccccc gaactgctcc caagcaaacc ggggctggca
     2101 agcggatttt taaacacgcc ctgcatcgca ttgccggcaa gcgcaaggct ggcgcccgtc
     2161 agcaccgcca agccaatacg gggcagtcga atttcaccca gcaccagcca gcgcagatcg
     2221 cttagcacgc cttccgcatt tttaagcaag gcaaaatcgc tcagttggta aaaggctgcg
     2281 ttgctaacaa tcagcaacaa caagcttcca agcacaatgt ttaatttctt cattcttctt
     2341 tctctcatca aacgtgcaaa ttataccata gcgccaaagt caagctgaaa acgctatttt
     2401 tgcgatcatc atcgaaaaac tagcgtttgc cgaatgtaac ccacgacagg ctttgctata
     2461 ttccttcaat cagcctaagt tttgtattta aaacattaca gattgggggt agaatgtacc
     2521 atattgaacg cactgaaatt ttcgaccaat ggcttgaaaa tttaaaagat ccacttgctg
     2581 tggtgaccat tgcaagacgt attgaacgtg ccgaaagcgg aaattttggc gataccaaat
     2641 atatcgcaga aggaatttcc gaaatgaggc taaacgtcag caaaggttat cgcctttact
     2701 atgcgcaaaa aggtagcatt atttatatac tactaaatgg cggacataaa ggcacgcaac
     2761 aagctgatat tgataaagct aaaatgctat gggcagaaat taaacaacat atggcagaac
     2821 aggagaaaaa gaatgaacga attatatgac gccccaattc cacaagctac tcgtgaaaaa
     2881 tttggcattc aacctttcga tgccgctgaa tacctcgcca atgacgagct aatcgccctt
     2941 tatttggcgg aaacattgaa agacggcacg gacgaggagt ttattcaagc attgaatacc
     3001 gtggcacgag cgaaaggaat gaatgagtta gcgaaaaaag cagggatcgg gcgtgaaagt
     3061 ttgtatcaaa gcctttccag cagtaagccc cgttttgaga ctatccgcaa aattattagc
     3121 gcattaaatt tggagttgtc ggtcgttaag gcgtaagttt gtgcattaat tgtatcccct
     3181 gccaaacccc gtggtcgaaa cagtaggtgt atttcatcgg taggacaagc ggtggatttt
     3241 ggctcatttt ttgccatatt ttttgtaatg ctgggtgttt gagcagttcg gcttggttgt
     3301 tatagctttg gttatcggtg aggaacaata actgtttggg ttgcgctaac agcagttttt
     3361 ctagcgagaa attctgtggc gtgaggtcgc tttttaatgg tgacagaccg agaagatcca
     3421 acaacgtttg atattgcgga aaatgcggtt cgatcatacc cgtttcgctt agaattaaag
     3481 tttcagcaag cggttgtttt agcggaattt tttgcaaacg tagccgttcc accagctttt
     3541 ccgctttggc ttgattttgg gttagctcgc ccagttgtaa aatcagtgtg aaaagctgtt
     3601 cgggtgtttg cggactgtcg tttaatgcga ctaacttaaa gccaagctgt ttcagccgtg
     3661 cggtgagttg cggatagaag gtttcattca gcaaaatggt gctgtcggca tagggcaaca
     3721 gggcggtgag ttcaggctca acggtgggct tgtccgtgtt cagtttatcc aacatcatca
     3781 acggcttttg ggaatagggc gacatcgccc gaatttgctg tggttcggca agttccagca
     3841 acagacggtc gctacacaaa tttggcgata aacggtaagc tcctgaaata cgcccagtga
     3901 tagaattttt aaactgtgaa ttatcggtgt aacggccact aatagaaaaa ctgtgatctt
     3961 gttcggtaaa taagcgatat tctagtgccg cacttttttc ggataaggtt ttttcacgca
     4021 aatatttatc agaggtatag cgtgtttttg cataatctgt cagtaaactg accgcttgtg
     4081 tcacttctcc ttcacggtca aagtttacat ctaattgata attcgcatta agttgttttt
     4141 cgttgctgta gcgagcattt gaaccgaaat gtgttgcttt actattgaat tggctgatat
     4201 ttgcttggtg tttcagcagc tcttgttcat ttccccaata accgcctaat ttaaaagttt
     4261 gattgcgagt acgggaatat tcaccgctaa cgtctgaatt atagccatca atatgaacgg
     4321 tttgggaaga ttgagcggca agaacttcta cccctttgtt accgaggtca taacctaaac
     4381 gtaaagagcc gttatcacga tgaaagccat ctcgttcgct tgcaccaccg gttttcactt
     4441 ctgagcctgt ttctgtggta tagctgaaat ggtttttact cagtgcggaa atgcctttgg
     4501 tacgatggct atcaccgtgt aaggcatagt agaaaccgtt gtgaaatccg gaaagtgttg
     4561 cgctggcatc acgggtatta tttgagccta aaccaagatc gacctccgca ttgaatggtt
     4621 tctctttgta taaaccgctt ttagtggtga tataaactac accacccata gcactgcttc
     4681 cccaaagggc ggattgctcg ccacgcaaca cttcgatacg ttcgatattg ctaatcggta
     4741 agccaccaaa atcgaaattt ccaatattaa tcggattgac ttttacaccg tcaatcacaa
     4801 ccgcagtatg gcgagattct gcccctcgta aaaataagct agtaagagta ccacgcccac
     4861 cttgttgccc aatcgccacg cccggcacag tctttaacac atcactcaca taagtcgcat
     4921 tgcgtgcggc aaaatctttt tcggtaagaa ccgtcacgct ggaagcggtt ttgtcttggt
     4981 tgattggggt tgcataggcg gaatagactg ttacggaatc aagctgagtc atctcatttt
     5041 gtgcaaaagc tgtacttgct agtgcaacag aaatggcgaa tgctgtggga ttctattgat
     5101 cgcctaagtc ctttaaaacc gaaatttgtt tcggtaactt atggagcaaa ttctggtgag
     5161 cgagatcgta cacacagtat tgtgaaatca atccaagaaa aaacagggat catttcagct
     5221 ccgcacttaa caggcattga tgcaacaccg gaagaattaa aggtaattgc caaagattat
     5281 tgggatagtg gtattcgccg aattgttgct ttgcgtggcg atataccgaa aggttatgat
     5341 aaagcactat tttacgcctc agatttagtc gctttattaa aatcagtagc agatttcgat
     5401 atttccgtgg ctgcctaccc tgaagttcac cctgaagcaa aatcagcaca ggcagattta
     5461 cttaacttga aacgtaaaat cgatgcgggt gcaaaccacg ttattacgca attctttttt
     5521 gatgtagaga gttatttacg ttttcgtgat cgctgtgttt ctattgggat tgattgtgaa
     5581 attgtgccgg gtattctgcc ggtgacaaat ttcaagcagt tgcaaaaaat ggcagcagtg
     5641 actaatgtta agatcccgac ttggatgggt aaaatgtacg aagggttaga tgatgatcaa
     5701 accaccagaa acttagttgc agcaagtatt gcaatggata tggtgaaagt gctttctcgt
     5761 gaaggggtga atgatttcca cttctatacc ttaaatcgta gtgaactcac ttatgcaatg
     5821 tgccatactt taggcgtaag acctgattta acaactgcat aatcgaacat taaggctgta
     5881 tagctaaatg agctatacct ccttatagtt ttacttctct tcagccaccc aaatctcgcc
     5941 attttttaat aataaatagg ctttgttgga atcggctttg gtttgtttaa ttccagccgg
     6001 cagggcggtt ggcaattcag tgatcttgcc tgttttatcc aacacaacaa cttgttgata
     6061 gcccatttgg ggtatcagtg cgaaagtctc tgttgtcgcc actaaattgg tttcgtgatc
     6121 accatagcgg tgattgctta agccggaggt aataaaacgt tcagctaatt ggtttccttt
     6181 caggctgtat tcaaccaaat tgccttttag atgtggcatt tggattgcat agagcttgcg
     6241 gttaaagata aacggcgatt gccaacggtt agtcgacagc ggctcacttt cggcttctat
     6301 tgataatttt ccgtctttaa cgccaatcac aacagtgctg gccccattgc catcgccaga
     6361 gataacagaa acgatcttgg tttttccatt ttctgtgaaa gtcgcccagc ggttggcttc
     6421 aaatactcgc ccttgttggg tgagtttttc tgctaagggg tttagggtat ggcgttctag
     6481 aaattgaatt tcgcctgcct ctacatcatc gcctaataca ccgtgttgat atgtaaaatc
     6541 atcaggcttt gcaagtacag caatatgccc ttggttaggt gtttcggcat caaaatcaat
     6601 ttgcagaggg tgagcatcag gcaacacctc ggtttctgcg gtggcagtaa tagtggcttg
     6661 gtttccttgc gtttcaattc tggctaactt aaattgtccg ttttgtttgg tcacggcaat
     6721 ggtggcaaaa ttaagggcgg tcattgtagc tttcggggca aggggaatgt tggaggtata
     6781 gattttatca gccgtccaca gcataaaatg cccgttttga tccgctaacg caattcgttg
     6841 gtattgagct ttaggttcaa tctcggtgga aactccatct gccagttttt gagcttgttg
     6901 tgtgactctc cataattgtt tttgttggtt aattaccact aattcgcctt gttctgaaag
     6961 gtcaaattgg cttactttgc caatttgggg aagtgggagt ggagaaagct gaacatcagc
     7021 aaacaaagaa gcggagaaca agcttaagat taacagaata gattttttca ttagcgttac
     7081 ctaaaaagaa gatttaaatg ataaagggag atgttatctc cctttacgct ttagccttta
     7141 taaccattcg ggttattttt ttgccaattc caagtgtctt tcatcatttg ttctagccca
     7201 cgctcggttt cccaacccag ttgctctaac gctttttgtg gagcggagta gcaaacggca
     7261 atatcgcccg ggcggcgatc taccactttg tatggaatag taatgccatt tgcggcttca
     7321 aaggctttta ccatatctag caccgaataa cctgttcctg tgcctaaatt gtaaacgtgg
     7381 aaaccggcat cattttggtg cttgtctaag gcttttaagt gaccaagtgc taaatctacc
     7441 acgtggatat aatcacgcac acctgtgcca tcgtgagtat tataatcgcc accaaacacc
     7501 gataattgag gtaatttgcc cacagccact tggctgataa acggcattaa gttatttggg
     7561 ataccgtttg gatcttcacc gattaaaccg ctttcgtgag cccctaccgg gttgaagtaa
     7621 cgcaatacta ccgcacttaa ttgtgggaag gctttaacgg tatcttcaag aatgcgttca
     7681 accatatatt tggacgtacc gtaagggttg gttgtgccac cgacagggca agattccaca
     7741 atcgggataa tctgcggatc accataaacg gtcgccgatg aactaaacac aatggtattc
     7801 acattggctt ttagcatctc ttctaccaat acaatcgagc cggttacatt gttttgatag
     7861 taacgtagcg gttctctgac gctttcgcct acagctttta aaccggcaaa gtgaattacc
     7921 gattcaatct gattttccgc aaaaattttg cgtaaaatat cacgatctaa aatatcgcct
     7981 tgatagaatt ttacgctctt gccggtgatc tgcttcacac gctcaagtga tacttcagag
     8041 gaattagaaa gattatctaa caccacgatt tcacgatttt cgtttaataa ttcaactaat
     8101 gtatgtgaac cgatgtagcc tgcaccacct gtaactaaaa ttgccatttt atgttcctct
     8161 ataaaattaa tacgaaccaa ggttattgtt gctattttac ccgatttaat caggcttgct
     8221 aatatttatt cagtttataa tgccactccg gcttccggca gtaattccgg aatgccgttt
     8281 ttaatcgggt aagcaatatt gagcttaggg ttaattaatc ggttgttctc tttgtcccat
     8341 tctaattttt cattagagac agggcagacg aggttattga gtagtgtttc gttcatcttc
     8401 ttttcctagt ttttgtagaa tcggggctaa caaacaagcg gtcgattttt ctgaaaatgt
     8461 tgcagaaacc ggtacatacc accaatttgg ctgtgcaaaa tcgtggcatt ttaccgcatc
     8521 tttctcggtc attaataacg gcgtttggct atcagcaaat tgagccagct gagccttatc
     8581 aaaggcttga tgatcggcaa agccttgagt tttggcaagc ggaatgccta atttttctaa
     8641 catcgtaaaa aagcgtggtg ggtgaccgat accggcaatc gccacacagg gttgggtaaa
     8701 ttcgcttaat ggcttgcgtt gattggtgac taaattaatt gcatcagacg gttcaagcgt
     8761 cattaaatgc tcgttagctt gcggtgtgcc gccgttgcaa ataaccgctt gcacggagtt
     8821 taaacggctc ggtaattcac gcaatccgcc cgccggcagc acaaaaccgt taccgaaacg
     8881 ccttacgcca tcaaccacca cccattccat atctcgctgt agggcatagt gttgcaagcc
     8941 atcatcggtg atgatgatgt ccggctcaaa ctgatttaat agtaattcaa tgctttgttg
     9001 gcggtttgga gaaatagcca aaggcacatt ggttcgctga acaatcagaa ccggttcatc
     9061 acccaccatt tcagcagaac tttctcgggt aactaattgc ggaaacgttt tcgctttacc
     9121 gccatagcct cgagaaatca cgcctacttt tacgccacgc tgttgcagtt gttccaccag
     9181 ccaaacgacc actggcgttt tgccgttgcc tccaaccgag atattaccga ctaccagcat
     9241 aggcaaaggc gaacggtacg attgcaaaat attcagagaa tataaccgct tgcgagcttg
     9301 actaatcagc caaaacagca acgaaagcgg cgaaagcagc caagtgataa gggattttgt
     9361 ttgccagatt ttcatattat ttatttttaa gtgtttcaac taaatctcgt aataaggcta
     9421 attcacgttt ttggttttcg ataatttctt ctttatgggc taataattca tctttgtggg
     9481 agataataag ttgtaaacgt tgaatttctt ctactccatt tccta
//
LOCUS       DANLTI010000104         9444 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.104, whole genome shotgun sequence.
ACCESSION   DANLTI010000104 DANLTI010000000
VERSION     DANLTI010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9444
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.104"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            36..2102
                     /gene="glyS"
                     /locus_tag="PXB09_002033"
     CDS             36..2102
                     /gene="glyS"
                     /locus_tag="PXB09_002033"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDL5234113.1"
                     /translation="MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEK
                     VEWFAAPRRLAVKVLSLAESQPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITV
                     EQAERIATDKGEWLVHRAVIEGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTEQFVRP
                     VHTVTLLFGAELIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVAD
                     FNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEA
                     LVYTMKGDQKYFPIYSKDGKLLPHFIFVSNINPEDPSKIIEGNEKVVRPRLTDAEFFF
                     KTDLKQKLEDQLPRLETVLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVAC
                     SVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA
                     QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRA
                     VSHFRTLDSAEALAAANKRVSNILAKADIAIGDIDVSACVEPAEKALAEAVIALKAEV
                     QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVA
                     DISLLQ"
     gene            complement(2207..3508)
                     /locus_tag="PXB09_002034"
     CDS             complement(2207..3508)
                     /locus_tag="PXB09_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDL5234114.1"
                     /translation="MNIHCEKLVQSILHAVNHEVVPALGCTEPISLALASAIARQYLG
                     HLPERIEAKVSPNLMKNGMGVAVPGTATVGLPMAAAIGAIGGEPDGGLEVLKNITPEQ
                     VKQAKAMLNTDKVSVSIFETEHILYSEATLFHQANRVCVRIAEHHTNVIYIEKNGQTI
                     LSKPCAVNNDNTTEIFASLSAKDIFNFSMQIELEKIRFIEQAAQLNSALSQEGLRADY
                     GLHIGRTLQKQIGLGLISDDLLNRIVIETTSASDARMGGASLPAMSNSGSGNQGITAT
                     MPIVVVARHLNVTDEQRIRALFLSHLMAIYIHSKLPKLSALCAVTTAAMGSCAGIAWL
                     LTGKFENISMAISSMIGDISGIICDGASNSCAMKVSTSVTSSYKSILMSMDNSQVTGN
                     EGIVEHDIDRSINNLCSIASRSMQYTDRQVIEIMVNKPKLK"
     gene            complement(3522..4799)
                     /locus_tag="PXB09_002035"
     CDS             complement(3522..4799)
                     /locus_tag="PXB09_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234115.1"
                     /translation="MDTQKLSPAEFKQATKFDSTDFGWIIMSIGMAIGAGIVFLPVQV
                     GLMGMWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPTVISGYLGKNWGIFLGVL
                     YFIMLVIWMFVYSTAITNDSASYLLTFGITNTLLSDNPFYGLVLICILVALSSRGEKL
                     LFKISTFMVLTKLFVVAALGLAMIGMWQLHNIGAMPPFGKLIKDAIITLPFTLTSILF
                     LQTLSPMVISYRAKEQSREVARYKALRAMNIAFAILFITVFFYAVSFTLAMGREEALK
                     AYEQNVSALAIAAQFFPGSWATYVGVALNIFAVMTAFFGVYLGFREATQGIVMNLLLR
                     KFPAEKINPNYVQKGIMLFSILLAWSAIVLNAPVLSFTSICSPIFGLVGCLIPAYLVY
                     KVPALFKYKGLALNIIIITGILLCISPFLTFLE"
     gene            complement(4828..5496)
                     /locus_tag="PXB09_002036"
     CDS             complement(4828..5496)
                     /locus_tag="PXB09_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDL5234116.1"
                     /translation="MPDKLEYLHDLDKEIMLSYFSLSEAIAGLLGEFCEVVIHSLNAY
                     EKSVIKIINGHHTNRKIGSPITDKGLQLLKCYQKDQSNTELVYFSRLNNGNLVKSTTH
                     IIIGHEGKPIGLFCINLNLSTPLDKTVSSFMNYDPIPPHYKSENFITHPKELIEETFL
                     KAVTHIEQHTTKHSKLYKKSIIFYLFENGIFELKEAVPIVAEKLSLTSHAIYKHLREF
                     KNNT"
     gene            5730..6020
                     /locus_tag="PXB09_002037"
     CDS             5730..6020
                     /locus_tag="PXB09_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5377 domain-containing protein"
                     /protein_id="HDL5234117.1"
                     /translation="MSVKTEVLFSNHWNVRVSDPGFEGSPSHYFETVYLTLEAFINGE
                     NVHYEFTRKVEQEVKTHRSFTDVNELFEFLGEYLSPVALGNVGVRIGQLGLA"
     gene            6087..6998
                     /gene="xerC"
                     /locus_tag="PXB09_002038"
     CDS             6087..6998
                     /gene="xerC"
                     /locus_tag="PXB09_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDL5234118.1"
                     /translation="MTTSNPLFQQTRPYWDFLRIEKQVSPHTLSNYQRQLMAVSELFS
                     QAGIENWEEVESSSVRWMLSQSHKQGLSAKSIGLRLVALRQWFVYLIKIGRMSANPTL
                     GVKSPKVGKHLPKNIDAEQVGQLLAIESDEPSDIRDIAMMELMYSSGLRLSELQGLDL
                     GDMDLSAREVRVQGKGSKERIVPIGSQALKALNRWLEMRLQFKPQDNAVFLNKRGGRL
                     SHRSIQLAMKKWGERQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSSLSTTQ
                     IYTHLDFQHLAKIYDSAHPRARRKQED"
     gene            complement(6995..7366)
                     /locus_tag="PXB09_002039"
     CDS             complement(6995..7366)
                     /locus_tag="PXB09_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDL5234119.1"
                     /translation="MKYLYIICGFICIGLGIIGAVLPGLPTTPFLLLALFCFTKGSER
                     IRQWFIQTKLYKKYLQEYDEKRAMTMKQKITILAISFPFTLFAFFALPHIGGKIALVV
                     LVIIQYWYFFCKMKTLEPENA"
     gene            complement(7522..7611)
                     /locus_tag="PXB09_002040"
     tRNA            complement(7522..7611)
                     /locus_tag="PXB09_002040"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7575..7577),aa:Ser,seq:tga)
     gene            complement(7703..8794)
                     /gene="trmA"
                     /locus_tag="PXB09_002041"
     CDS             complement(7703..8794)
                     /gene="trmA"
                     /locus_tag="PXB09_002041"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDL5234120.1"
                     /translation="MTLPIEQYSDLLAKKTENLTALLKPFNPPAIEVFASKPSHFRMR
                     AEFRVWHEEGELYHIMFNPETKARYRVDSFPIASELINHMMTALLAEIKGNELLTRKL
                     FQIDYLSTLSGEIAVSMLYHKSLNEEWVEQANALKSRLEQQGFKVQIIGRANKQKIAL
                     DCDYVEEILPVHGKNYVYRQVENSFTQPNAEMNIKMLEWARNCTKNSEGDLLELYCGN
                     GNFSIALAENFRKVLATEISKSSVQSAQYNIEKNGIVNLQIIRMSAEEFTQAMNGVRA
                     FYRLKGIDLNAYECNTIFVDPPRAGLDQATLNMVQAYERILYISCNPETLAENLQQLS
                     QTHRIEKAALFDQFPYTHHIESGVWLIRK"
     gene            complement(8859..9191)
                     /locus_tag="PXB09_002042"
     CDS             complement(8859..9191)
                     /locus_tag="PXB09_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF413 domain-containing protein"
                     /protein_id="HDL5234121.1"
                     /translation="MADSFSVTRRFFDDKNYPRGFSRHGDYTIRESQTLEQFGQACLA
                     LESGERKPATQEEKRFVAVMKGEEVAETDIEKAWLKYRTLTSKTKRIYTLSGNAGSDA
                     GDDFSAAE"
BASE COUNT         2788 a         1851 c         2095 g         2710 t
ORIGIN      
        1 aaagaacatt tatataaaaa ttggtaattt aaacaatgac aacacaaaac ttccttgccg
       61 agatcggcac agaagagctg ccaccgaagg cactcaaaaa attagcgacc gcatttgcgg
      121 agaatgtaga aaacgaatta aaccaagcag gtctttcgtt tgagaaagtg gaatggtttg
      181 ctgctcctcg ccgtttggcg gtgaaggtgt tgagccttgc ggaaagccag ccgagtaaag
      241 aggttgagaa acgagggccg gcggtgtcgg cagcgtttga tgccgaaggc aagccgacta
      301 aggcagcgga aggctgggcg aagggctgcg ggattaccgt agagcaagct gagcgtattg
      361 ccaccgacaa aggcgaatgg ttggtgcatc gtgccgtgat tgaaggtcag ccgactaaaa
      421 atctgttggt cgatattatc gccaaatcgc tggcgaactt gccgattcca aaaacgatgc
      481 gttggggcga taaaaccgag cagttcgtcc gccctgtgca taccgtgaca cttttattcg
      541 gggcggagtt gatcgaaggt gagatcttag gcgtgaaaag cggccgtact attcgtggtc
      601 accgtttctt aggtgaacgt gagttccaaa ttgagaacgc cgatcaatat ccgcaactgt
      661 tgaaagatcg tggatctgtg gtagcagatt tcaatgagcg taaagcctta attcttgcaa
      721 aatcacagga aaaagcaacc gctttgggtg gcgttgccga tattgaagaa gatttgctgg
      781 acgaagtgac ctcgttggtg gaatacccga acgtactcac cgccaagttt gaagagcgtt
      841 tccttgctgt gccggcggaa gccttagttt acaccatgaa aggcgaccaa aaatacttcc
      901 cgatttattc aaaagacggc aaattgttac cgcactttat ttttgtgtcg aacatcaatc
      961 cggaagaccc aagcaaaatc atcgagggta acgaaaaagt ggttcgccca cgtttgaccg
     1021 atgcggagtt cttcttcaaa accgacttaa aacagaagtt ggaagaccaa ctgccacgcc
     1081 ttgaaaccgt gttgttccag caacagcttg gcacattgcg tgataaaacc gctcgcattg
     1141 aagcgttggc aggtgaaatt gcgaagcaaa tcggggcaga tgaaaccaaa gcgaaacgtg
     1201 caggtctcct ctcaaaatgt gacctgatga ccaatatggt gtttgaattt actgataccc
     1261 aaggcgtgat gggtatgcac tatgcccgcc acgacggtga agatgaagaa gtggcggtgg
     1321 cgttaaacga gcagtatatg ccacgttttg ctggcgataa cttgccaaat tcattggtgg
     1381 cttgctcggt ggcgttggcg gacaaatttg acacgctaac agggattttc ggcattggtc
     1441 aagccccgaa aggcagtgcc gacccgttcg ccctacgccg tgcggcactt ggctcgttgc
     1501 ggattattgt ggagaaaaat ttaccgcttg atttaaccga tttagtggcg aaatctgctc
     1561 aattatttgg cgataaactc accaacaaag acgtggttga ggacgtggtg gactttatgc
     1621 tcggccgctt ccgtgcgtgg tatgagagcg aaggcattgc ggtggacgtg atccaagccg
     1681 ttctcgcccg ccgtccgacc aagcctgccg acttcgatgc ccgtgtgcgt gccgtgtctc
     1741 acttccgcac ccttgacagt gccgaagcct tagccgcagc gaataaacgg gtgagtaaca
     1801 ttcttgccaa agccgatatt gcaattggcg acattgatgt ttcagcttgc gtagagccag
     1861 cagaaaaagc attagccgag gcggttattg cgttgaaagc cgaagttcaa ccgctgattg
     1921 cacagggcga ctacaccgct gtgctggata aattagcgaa cctccgccaa ccggttgatg
     1981 ccttctttga cggagtaatg gtaaatgcag aagaccaaaa actgcgtcaa aaccgcctcg
     2041 ccattttaag cacgctacaa ggcttgttcc tgcaagtggc ggatatttcg ctgttgcaat
     2101 aacaataagt ttgcaataat tgcaaaattt taatgaaaat agaccgcttg cagtaattgt
     2161 gatctgcaag cggtcttttt tgcttgaaat tttaccaaag gcgggattat ttaagttttg
     2221 gtttattcac cataatctcg atgacttggc ggtctgtgta ttgcatacta cgagaggcaa
     2281 tgctgcataa gttattaatt gaacgatcaa tatcgtgttc gacaattcct tcgttgcctg
     2341 ttacttggct attatccata gacatcagaa tggatttata gcttgatgtt acgctggtgg
     2401 agactttcat cgcacaactg tttgaagcac catcacagat aataccgcta atatcgccga
     2461 tcatactact aattgccata ctgatattct caaatttccc tgtgagcagc cacgctatgc
     2521 cggcacagct tcccatagcc gcggttgtta cggcacagag tgcagataat ttcggtaact
     2581 tgctgtgaat ataaattgcc atgaggtgtg ataaaaagag tgctctaatg cgttgctcat
     2641 cagtgacatt taaatggcgg gcaacgacaa caatcggcat agttgctgta attccttgat
     2701 tacctgaacc cgaattgctc atagcaggta aacttgcacc gcccattcta gcatcagagg
     2761 cagaggtggt ttctataaca atgcgattaa gcaaatcatc actgattaga cctagaccaa
     2821 tctgtttttg caatgtcctt ccgatatgta gcccataatc ggcacgtaat ccttcttgtg
     2881 agagtgcgga atttaattgt gctgcttgct caataaagcg aattttttcc aattcgattt
     2941 gcatagaaaa attaaatata tcttttgccg aaagtgaagc aaagatctca gtagtattat
     3001 cgttattgac ggcacaaggt ttgcttaaaa tagtttgccc gtttttttca atgtaaatga
     3061 cattggtatg gtgttcagca atacgaacac atactcgatt cgcttggtga aatagtgttg
     3121 cttcagaata tagaatatgt tctgtttcga aaatagagac agacacttta tcggtattta
     3181 acatagcttt agcttgctta acctgttctg gcgtaatatt ttttaatact tctaatccac
     3241 catcaggctc ccctccgatt gctccaatag ctgccgccat aggcaatccg acggttgcag
     3301 ttcccggtac tgctactccc atcccatttt tcatcaagtt aggggaaact tttgcctcaa
     3361 tacgttctgg taaatgacct aaatattggc gtgcaatggc ggatgcaagg gcgagagaaa
     3421 taggttctgt acagcctaat gcagggacaa cttcatggtt gactgcatgt aaaatggatt
     3481 gtactaattt ttcgcagtga atattcatag ataaaacctt attactctaa aaatgtgagg
     3541 aatggagaaa tacataataa aatgccggta atgataataa tattgagtgc tagcccttta
     3601 tatttgaata atgcaggcac tttatagact aaataggccg gaatcaagca cccaactaag
     3661 ccaaaaatag gactacagat tgaggtaaag cttaaaaccg gtgcatttaa tacaatcgca
     3721 ctccaagcca gcagaatgga aaataacata atccctttct gcacataatt aggattgatt
     3781 ttttcagccg ggaattttct taataatagg ttcatcacaa tgccttgagt ggcttctcta
     3841 aaacctaaat ataccccgaa aaaggctgtc ataacggcaa aaatatttaa tgcaacacct
     3901 acataggttg cccaactacc agggaaaaat tgggctgcaa ttgctaatgc ggaaacattt
     3961 tgctcgtatg ctttgagcgc ttcttctctc cccattgcaa gtgtaaaaga gacagcgtaa
     4021 aaaaaaacgg taataaataa gatagcaaat gcaatattca tcgctcgtag ggctttatag
     4081 cgcgcaactt cacgagactg ttctttagca cggtaagaaa ttaccattgg gctgagagtt
     4141 tgcaagaaga gtatagaggt tagggtgaaa ggaagggtaa tgatggcatc ttttataagt
     4201 ttgccgaaag gaggcattgc accgatatta tggagttgcc acattccaat cattgcaagc
     4261 cctaaggcgg caacgacaaa tagcttagtt aataccataa atgtagatat tttaaacagt
     4321 agcttttcgc ctcgagaaga taaggcaact aatatacaga ttagcactaa gccataaaat
     4381 ggattatcag agagtagtgt attggtaatg ccgaaggtaa gaagatagga ggcactgtcg
     4441 tttgtaattg cggtagaata aacaaacatc caaatcacta acataataaa ataaagtaca
     4501 cctaaaaaga ttccccagtt tttgcccagg tagccactaa taacggtggg gtaatctttg
     4561 cattccggag attctgctaa agtattaatg aacagacgct gaaaaaggta catcgccggg
     4621 tatccgataa tagaagaaag tagaaaaacc cacatgccca taagtcctac ttgtaccggt
     4681 aaaaagacga tgcctgcccc gatagccata ccaatactca taatgatcca gccgaagtcg
     4741 gtagaatcaa attttgttgc ttgtttaaat tcggcaggcg agagtttttg agtatccata
     4801 gagtctcctt aaatcgtaac agtataatta agtgttattt ttgaattctc ttaaatgttt
     4861 ataaattgcg tggctggtta gggagagttt ttctgccaca ataggtactg cctcttttag
     4921 ctcaaagatg ccattttcaa acaaatagaa gataatggat ttcttataga gttttgaatg
     4981 tttggtagtg tgttgctcaa tgtgagtaac tgcttttaga aaggtttctt caataagttc
     5041 ttttgggtga gtaataaagt tttcactttt ataatgaggc ggaataggat cgtaattcat
     5101 aaaagagcta acggttttat ctaatggtgt cgataaattt aaattaatac aaaataatcc
     5161 gataggtttg ccctcatgcc cgataataat atgcgtggtg gacttaacta agttaccgtt
     5221 atttaaccgt gaaaagtaaa ccagctcagt attagattga tctttttggt aacattttag
     5281 taactgtaat cctttatctg taataggcga acctattttt cggttagtat gatgtccgtt
     5341 aatgatttta ataacggatt tttcataggc attcaatgaa tgaataacca cctcacagaa
     5401 ttctcctaat aaccctgcta ttgcttcact taatgagaaa taagacagca taatttcttt
     5461 gtctaaatca tgaagatact ctaatttatc tggcataact tttactccaa tttttgtgaa
     5521 ttataagaat gagtaaattt taaagtcaat tatatttaac tttattaaga gttaaaagtc
     5581 agtatttttt gaccaagatc atattttgag ggaaagatat aagaggacaa accaaataag
     5641 atttgcctcg attctgacta ggaaaagtgg caaattcaat ctatcttgat taaaataatg
     5701 tacgtactta taggaagaag gaaaacacaa tgtcagtaaa aaccgaagtt ttatttagta
     5761 atcattggaa tgttcgagtg agtgatccgg gctttgaagg ctcgccaagc cactattttg
     5821 aaaccgtata tttaacgctg gaagccttta ttaacggcga aaatgtacat tatgaattta
     5881 ctcgtaaagt ggagcaagaa gtgaaaactc atcgcagttt tactgatgtg aatgaattgt
     5941 ttgaatttct cggcgaatat ttaagccctg ttgcacttgg taatgttggc gtgcgtatcg
     6001 gtcagttggg gctagcctaa tctcaaaggg caaatctttt gcccttgcaa cattttccta
     6061 aaaattaacc gcttgttatt acgtttatga ccacttccaa ccctcttttc caacaaaccc
     6121 gcccctattg ggatttctta cgcattgaaa agcaagttag cccgcatacc ttaagcaatt
     6181 atcaacgcca attaatggcg gtgagcgagc ttttttcgca agcaggcatt gaaaattggg
     6241 aagaggtcga aagtagctcg gtgcgttgga tgttaagcca aagccataag caagggttga
     6301 gtgcgaaaag tatcggctta cgcttggtgg cgttacggca atggtttgtc tatttgatta
     6361 aaatcgggcg aatgtcggca aacccgactt taggggtgaa atcgccgaaa gtaggtaagc
     6421 atttgccgaa aaatattgat gcggagcagg tcgggcagtt gctggcgatt gagagtgatg
     6481 agccgagcga tattcgagat attgcgatga tggagctgat gtatagttcc ggcttgcgtt
     6541 tatcggaatt acaagggctg gatttaggcg atatggattt atcggcacga gaagtacggg
     6601 tgcaaggtaa gggtagcaaa gagcgaattg tgccgattgg ctcgcaagcg ttaaaagcgt
     6661 taaatcgctg gttagaaatg cgtttgcaat ttaagccgca agataatgcg gtgtttctga
     6721 ataagcgagg tgggcggtta tctcatcgtt ccattcagtt ggcaatgaag aaatggggtg
     6781 agcgacaagg gctggaaagc catctgcatc cacataaatt acgtcactct tttgcgactc
     6841 atatgttaga ggcaagcggt gatttgcgag cggttcagga attattgggt catagtagcc
     6901 tgtccaccac tcaaatttat acgcatctgg atttccaaca cttagctaaa atttatgact
     6961 ctgcccaccc aagagcaagg cggaagcagg aagattaggc attctccggt tcaagggttt
     7021 tcattttgca gaagaaatac caatattgaa ttatcactaa cactactaac gcaattttcc
     7081 caccgatatg gggcagtgca aagaaagcaa atagtgtaaa cggaaacgaa atcgctaaaa
     7141 tcgtgatttt ttgcttcatc gtcattgccc gtttctcatc atattcttgc agatattttt
     7201 tgtataattt ggtttgaata aaccactggc ggattctctc cgagccttta gtaaagcaga
     7261 acagagccaa aagtaagaac ggtgtggtcg gcaagcccgg taatactgcc ccgatgatgc
     7321 ctaaaccaat acaaataaaa ccacagataa tataaaggta tttcataata attaagttat
     7381 tgataatgaa tcgcaattat cctaaagcaa ctttaggctg atttcaacca gtttatagcg
     7441 atggattcaa gcggtggttt tatctgattt tcttgcaaat gaaataaaaa aacctgctga
     7501 ttgctcaaca ggtttaaaga ctggcggagg aagtgagatt cgaactcacg gagggcgtta
     7561 accctcgccg gttttcaaga ccggtgcatt caaccgctct gccattcctc cgttgaaaac
     7621 gttgcaataa tagagattat tgcgaacatc gtcaagtaat aaatcttaaa agctgcttat
     7681 tcgttctttt tttcagcaca atttattttc taattaacca aacgccactt tcaatatggt
     7741 gggtgtaagg gaattggtca aaaagagcgg ctttttcaat ccgatgggtt tggcttaatt
     7801 gttgtaaatt ctcggcaagg gtttccggat tgcaagagat atagagaatc cgctcatacg
     7861 cttgcaccat atttaatgta gcttgatcta accctgcacg aggtggatca acaaaaatgg
     7921 tattgcattc gtaggcgttt aaatcaatcc cttttaagcg ataaaaggct cgcacaccgt
     7981 tcatcgcttg ggtaaattct tctgccgaca ttcggataat ttgtaggtta acaatgccat
     8041 ttttttcaat attgtattga gccgattgca ctgaagattt tgagatctcg gttgccagca
     8101 ctttgcggaa gttttccgcc aaggcaatcg aaaaattgcc gttgccgcag taaagctcaa
     8161 gcaaatcgcc ttcactattt tttgtgcaat ttctcgccca ttccagcatt ttaatattca
     8221 tttccgcatt cggctgggta aagctgtttt ccacttggcg atacacataa tttttgccgt
     8281 gtaccggtag aatttcttcc acataatcgc aatccagtgc gattttttgt ttattggcac
     8341 gcccgataat ttgcactttg aaaccttgtt gctctaaacg gctttttaag gcgtttgcct
     8401 gttcaaccca ttcttcattc aggcttttgt ggtaaagcat tgagactgca atttcaccgc
     8461 ttaaggtgct taaataatcg atctggaaca gcttgcgagt cagtagttca ttgcctttaa
     8521 tttccgccaa taatgcggtc atcatatggt taatcagctc actggcaata gggaagctat
     8581 ccacacgata acgagctttg gtttcagggt tgaacataat gtggtacagc tcgccttcct
     8641 cgtgccacac tcgaaattct gcccgcatac ggaaatggct tggctttgag gcaaatacct
     8701 caatcgcagg cgggttaaac ggcttgagta aagcggtcaa attttcggtt ttttttgcaa
     8761 gaagatcgga atattgttcg ataggaagag tcatttttta ccacaaatag caaatgaaaa
     8821 aacaaaccac gaattacttc gtggttttaa attagaaatt attcagcagc actgaagtca
     8881 tcgccggcat cgctacctgc attgcctgaa agggtgtaga tgcgttttgt tttactagtt
     8941 aatgtgcggt attttaacca cgctttttca atgtcagttt ctgctacctc ttcgcctttc
     9001 attaccgcaa cgaaacgttt ttcttcttga gttgccggct tacgttcacc actttctaaa
     9061 gccaagcaag cttgaccgaa ttgttctaaa gtttgtgatt cacgaatggt gtaatcgccg
     9121 tggcgagaga aaccacgtgg ataattttta tcgtcaaaaa agcggcgcgt aacgctgaaa
     9181 ctgtctgcca taataatgcc tcgttgtttg aaattaggga aaataaaatc ggcatacatt
     9241 aaacaaaaac agcgaataaa tcaatgcctt aatgtaaaaa agcggtcaaa tttggcaaat
     9301 tttttgcaaa aaactcttta aggagaaata ttgatccttt taaaatagac aatgcagtct
     9361 gaggtatatt ttttatattt gttaaggtat attacctaaa tgtattgagt tttgattaac
     9421 tttaatattt ggagatatac tgtg
//
LOCUS       DANLTI010000105         9410 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.105, whole genome shotgun sequence.
ACCESSION   DANLTI010000105 DANLTI010000000
VERSION     DANLTI010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9410
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.105"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..938)
                     /locus_tag="PXB09_002043"
     CDS             complement(<1..938)
                     /locus_tag="PXB09_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5234122.1"
                     /translation="MPTKPHKEYHELVELLISRGMLINDKSYAEKKLSQVGYYRLSGF
                     WHISRKPNQDGGLSENFLENVQFEEVYKLYIFDKKLRLLLLDIIERLEVNIRNIMAHE
                     LGRENPLAYEDYSLINQKFLKFQWKSNYAYANWLETTANKIKRSKDDSIEWHRKNEKE
                     IPFWVITETWDFGALSKFYSLLNGQHQRKIAKKFNVDENTLKNWLNEINIVRNLSAHH
                     SRIWNRKFSDIAIPKLDDPRWSKFKKMQQYFSNLSLDDKAKERIFGRVAILWFLVSQT
                     STNYHWLDKFEDLLNDFPNLPNTKVELMGFNREILE"
     gene            complement(1150..3267)
                     /gene="spoT"
                     /locus_tag="PXB09_002044"
     CDS             complement(1150..3267)
                     /gene="spoT"
                     /locus_tag="PXB09_002044"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDL5234123.1"
                     /translation="MYLFEPLDRIIQGYLPPEQIERVKRAYVIARDAHEGQTRSSGEP
                     YITHPVAVASIIAEMKLDQEAVIAALLHDVIEDTPYTEEELAAEFGQSVADIVQGVSK
                     LDKLKFRTRQEAEVANFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRPDKRRRIAK
                     ETLEIYSPLAHRLGIEHIKNELEDLGFEAMHPQRYRVLKMAIASARGHRKELIQRIAD
                     DIRGRLEEVQIEARVYGREKHLYSIYQKMRQKDQHFHSILDIYAFRVVVDNVDNCYRV
                     LGQMHALYKPRPKRVKDYIAVPKPNGYQSLHTSMIGPHGVPVEVQIRTEDMDKMADMG
                     VTAHWRYKEGESHHNTTVQLKAQQWLQSIVELQNSAGNTAEFIDSVKSDLFSDDIFVF
                     TPKGRIVELPANATAIDFAYAVHSGIGDRCVGAMVDRNPYPLSEPLRTGQTVEIITEQ
                     GKRPNASWLNFVVSGKARAKIRQSLKNQQHDEAIALGRRQLVRAMNLRSLDELCSETI
                     QSVLDELRLSSFDELLAEIGLGNQMSNVIAQRLLGEPLLIDTDGNPENNQPLKIEGIE
                     NRLISFANCCLPIPGDEIIAHVSSGKGLAIHNACCGNVKDYATEPSNYLPVEWEIAKE
                     KAIQFETEIVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENK
                     EHSELILRKLLSVKGVVKAARKQ"
     gene            complement(3377..3658)
                     /gene="rpoZ"
                     /locus_tag="PXB09_002045"
     CDS             complement(3377..3658)
                     /gene="rpoZ"
                     /locus_tag="PXB09_002045"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDL5234124.1"
                     /translation="MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEEND
                     KPTVIALREIEEGLITTDIMDQLENHDSIKQEAAEQEAISFLTEMSNEA"
     gene            complement(3761..4258)
                     /locus_tag="PXB09_002046"
     CDS             complement(3761..4258)
                     /locus_tag="PXB09_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDL5234125.1"
                     /translation="MAHFYEYLEFNSDEDRENQLEVYVEVKLSTDTEEKLQAVGVQGD
                     WLVMAEPYCPDCVEIVAYFQRMAKLNPNIKVKYVARKDNQERKHFDSDEQQQAVISAQ
                     KIPTIFDIRNGKTELVLSEFPQFLKDKMAANPEQFEQLKADFRMGKFGKEVEAELLAI
                     LLNTK"
     gene            complement(4283..5305)
                     /locus_tag="PXB09_002047"
     CDS             complement(4283..5305)
                     /locus_tag="PXB09_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5234126.1"
                     /translation="MSVTKKRLTLSDIAELSGVSKTTVSMILNGRGNDFRIKSETCQK
                     VKEIAKKHGYRANVYAKSLQAQRTNVIGLVIPDLTNYGFALTSRTLEKLCRENGLQLV
                     IACSDDTFEGEKKAIERLLDRQVDLLITAPTHNEPTYYQNAAQYTPMLQLDRYISGLN
                     IPSITSNDTQSISMLVENIVRAYHLKEFFYLGGQLSLSPSQNRLKGFREGLEQSHLAL
                     DENWVLHQDYQPESGYQMFAQIVEKLGRLPEAVFTASFTLLEGVMRYLTEHQQMDKLL
                     TQELHLATFDDHHLLNALPFHIHSIKQDHQQIAERTFELIQQKLAQQKIDDVKVDCEI
                     LWRKSI"
     gene            complement(5345..6775)
                     /locus_tag="PXB09_002048"
     CDS             complement(5345..6775)
                     /locus_tag="PXB09_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HDL5234127.1"
                     /translation="MHIFNNGKYKSLHAQSEGELNALRQTVLSDPDFYPTYHLAPETG
                     LFNDPNGLIFDGEKYHIFAQWFPYGALHGMKHWQHFITTDFQTFSKGDLLIPDELFES
                     HGCYSGGAILWQDKIVAFYTGNTRRPSDNARIPHQNIAIFDKSGKLLEKRCIIDQAPA
                     GYTEHVRDPKPYLTAEGKIRFVLGAQRENLTGTALIYEMDDLNATPRLIAELEVHNFD
                     NSNVFMWECPDLFSLGGKDLFVWSPQGKLRESHQFQNNYHATYALGELNGNRLRAEHI
                     EELDYGFDFYAPQTVENSDRILFGWVGLPDLTYPTDKYQWHSMLTLPRKLSLQNGKVI
                     QNPIVNVGELQAVEMSENFAIENLDTAYLQISVENQPLVLDFFSNEQGQKLSLRFENG
                     VLSLDRSQTEQTELMEKFGSVRHCKIEQLETIEIFFDRSVVEIFVNGGEKVLTSRFFI
                     AKRENVVKSSRPIQVKVAKVLPISVE"
     gene            complement(6880..7803)
                     /locus_tag="PXB09_002049"
     CDS             complement(6880..7803)
                     /locus_tag="PXB09_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDL5234128.1"
                     /translation="MSKIWVTGDAVVDLIPDGEHHYLKCAGGAPANVAVGVSRLGVEA
                     GFIGRVGNDPLGKFMREVLQAENVCTKQMILDAQHRTSTVIVGLDNGERSFTFMVNPS
                     ADQFLEIGDLPEFNQGDFLHCCSIALINDPSRSTTIEGIRRVKKAGGYVSFDPNLRES
                     LWKSLDEMKTVVNSVVAMADILKFSEEELTLLTETETLEQATQAITAQYPEKLIIITL
                     GKDGAIYHFNGKSQVVAGKALKPVDTTGAGDAFVSGLLAGLAQTPNWHDETVLVEVIR
                     KANASGALATTAKGAMSALPNKAELDAFLAE"
     gene            complement(7920..9347)
                     /gene="miaB"
                     /locus_tag="PXB09_002050"
     CDS             complement(7920..9347)
                     /gene="miaB"
                     /locus_tag="PXB09_002050"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDL5234129.1"
                     /translation="MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLL
                     LNTCSIREKAQEKVFSQLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVF
                     GPQTLHRLPEMINQIRGGKSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYC
                     SFCVVPYTRGEEVSRPVDDVLFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFA
                     ELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMM
                     KRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKVIEQVNFDMSFS
                     FIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQFSRAMLGTEQRILVEGPS
                     KKDLMELTGRTETNRVVNFVGTPDMIGKFVDVKITDVYTNSLRGEVIRTEDQMGLRVV
                     ESAESVIARTRKEDDLGVGKYVVNL"
BASE COUNT         2616 a         2117 c         1785 g         2892 t
ORIGIN      
        1 ttctctaata tttctctgtt aaatcccatc agttctactt ttgtattcgg taaattaggg
       61 aagtcattta ataaatcttc aaacttatct aaccaatggt aattagtgct ggtttgacta
      121 actaaaaacc acagaatagc tacccttccg aaaattctct cctttgcttt gtcatccagc
      181 gataagtttg aaaaatactg ctgcattttt ttaaatttcg accaacgagg atcatctagc
      241 ttaggaatag caatatcgct aaattttctg ttccaaatac gagaatggtg agcagaaagg
      301 tttcttacaa tgtttatttc attcaaccaa ttctttaacg tattctcatc tacattaaat
      361 ttcttagcaa ttttcctttg gtgttgccca tttaacaatg agtaaaactt agataatgca
      421 ccaaaatccc aggtttcagt aattacccaa aaagggattt ccttctcatt ttttctatgc
      481 cattcaatag aatcatcttt actacgctta attttattag ctgtagtttc tagccaattt
      541 gcataagcat aattagattt ccattgaaat tttaagaact tttgattaat cagagaataa
      601 tcttcataag ccaaaggatt ttcacgcccc aattcatgag ccataatatt acgaatatta
      661 acttctaaac gttcaataat atccaataat aaaagcctta gttttttatc aaaaatatat
      721 agcttataaa cttcttcaaa ttgtacattt tcgagaaaat tttcgctaag cccaccatct
      781 tgattaggct ttctagatat atgccaaaat ccagataaac gataataccc tacctgagat
      841 aattttttct ctgcatagct tttatcattt atgagcattc ctctagatat gagtagttct
      901 actaattcgt gatactcttt atgtggtttt gtaggcataa aattgaaggc attttaagaa
      961 aggcaaggac gtagcttgac actctaagtc gattacattt agtaaacctc agggacaggg
     1021 gctacgccac gattgcaagg gattatacat tttagctgat taaagtcaaa aggtttcatc
     1081 aattaataat agcaatactg tacttttaag gactataatt gcaaaaaact gataaaattt
     1141 taccgcttgt tactgcttac gggccgcttt tacaacacct tttacactta atagcttacg
     1201 gagaatcagc tcagaatgct ctttattttc cacagaaatt tgtactctca cttgatagat
     1261 atttccttct cttgcctcgc tattaatgct gccaatgttg ctatttaatt tggcaagcgt
     1321 tgatgtgatc cccgcgagta cccctggttc attgataata tccagtacga tttccgtttc
     1381 aaattgaatc gctttttctt tggcaatttc ccattccaca ggtaaataat tactcggctc
     1441 tgttgcgtaa tctttcacat taccacaaca agcattgtgg attgccaatc ctttacctga
     1501 actgacgtga gcaataattt catcacccgg tataggtaag caacagtttg caaaactgat
     1561 aaggcggttc tcaatccctt caattttaag cggttgatta ttttctggat taccatcagt
     1621 atcaattaat agtggctccc ctaataagcg ttgagcgata acattactca tttggttacc
     1681 tagaccaatt tcagccagta gctcatcaaa gcttgataaa cgtagctcgt ctaatacgga
     1741 ttgaatagtt tctgaacaca attcatcaag tgagcgtaaa ttcattgccc gaactagctg
     1801 tctacgccca agtgcaatcg cctcatcgtg ctgctgattt ttaagcgatt gacgaatttt
     1861 agccctcgcc ttaccactta ctacaaaatt taaccacgat gcatttgggc gcttaccttg
     1921 ctcggtaata atttccaccg tctgtcctgt tcgtagcggt tctgaaagtg gatacggatt
     1981 gcgatcaacc atcgcaccta cacaacgatc cccaatgcct gaatgcaccg cataggcaaa
     2041 gtcaatagcg gtagcattcg ccggcaattc aacaatacgc cctttcgggg taaagacgaa
     2101 aatatcgtca gagaacagat ccgatttaac gctatcaata aattctgctg tattgccggc
     2161 actgttttgc aattcaacaa tactttgtag ccattgctgg gctttgagtt gaacggtcgt
     2221 gttatggtgc gactcgccct ctttgtaacg ccagtgagct gttaccccca tatccgccat
     2281 tttgtccata tcttcggtgc gaatctgtac ctccaccggt acaccgtgcg ggccaatcat
     2341 cgaagtgtgt aaagattgat agccgttcgg ttttggcacg gcaatataat ctttcacccg
     2401 tttcggacga ggcttataca gtgcgtgcat ctgccctaat acacggtaac aattatctac
     2461 attatcaacc actactcgga aagcataaat atctaaaatc gaatgaaaat gttgatcttt
     2521 ctggcgcatt ttttggtaaa tggaatagag atgtttttca cgcccataca cacgggcttc
     2581 aatttgcacc tcttctaacc gaccacgaat atcatcggca atgcgttgaa ttagctcttt
     2641 acgatgtcct ctggcactgg caatagccat tttcagtacc cgataacgtt gcgggtgcat
     2701 tgcctcgaag cctaaatctt ccaactcgtt tttaatatgc tctattccca agcgatgtgc
     2761 caacgggcta taaatctcta aggtttcttt cgctatacgg cggcgtttat ccggacgcaa
     2821 agcaccaagc gtacgcatat tatgggttcg gtcggcaagt ttaattaaca caacccgaat
     2881 gtctttggtc attgccaaaa tcattttacg gaagtttgcc acttctgcct cttggcgggt
     2941 gcggaatttt aatttatcca gcttagaaac gccttgtaca atatctgcta cgctctgtcc
     3001 aaattccgcc gccagttctt cttcggtgta aggtgtatct tcaatcacat cgtgcaacaa
     3061 agccgcaatc accgcttctt gatcgagctt catttccgca ataatcgacg ccactgctac
     3121 cgggtgagta atatagggct caccgctaga gcgtgtttgt ccctcgtgag catcacgggc
     3181 tatcacataa gcacgtttta cacgctcaat ctgctcgggt ggcaaatagc cttgaataat
     3241 tcgatctaaa ggttcaaaaa gatacacgtt atacctcaac aacagaaata aaaatggaca
     3301 acgaatttgc aaattttgag gaaaatccta ccgcttgcag actcaattgt ccattctcta
     3361 tttacgaaaa ataaaattac gcttcgttgc tcatttcagt taaaaatgaa atcgcctctt
     3421 gctccgccgc ttcttgctta atagagtcgt gattttccag ctgatccata atgtcagttg
     3481 taattaaacc ttcttcaatt tcacgtaatg caatcacggt cggcttatcg ttttcttcag
     3541 gcacaagtgg ctcacgggtg tgaagttgta attgtcttgc acgacgtgca gcaattaaga
     3601 ttaaatcaaa acggttgcca attttctccg ctgcttcttg tacggttaca cgagccataa
     3661 atttactcca aagatttatt cggttttatt cataaaaaga ttgcgaatta tacagaaatt
     3721 ccgccaattc cgcaatgaaa gcgggctaaa ttcacaaaat ttatttggta ttcagtaaaa
     3781 tcgccaataa ttcagcctca acctctttgc cgaattttcc cattctaaaa tcggctttta
     3841 gttgctcgaa ttgctcaggg ttcgctgcca ttttatcttt taaaaattgc ggaaattcag
     3901 ataacactaa ttctgttttg ccattacgaa tatcaaaaat agttggaatt ttttgcgcag
     3961 aaatgaccgc ttgttgctgt tcatcgctgt caaaatgttt gcgttcctga ttatctttgc
     4021 gagccacata tttcacctta atgttaggat tgagctttgc cattcgctgg aaataagcca
     4081 caatttccac acaatcgggg caatatggct ctgccattac cagccagtcc ccttgcacgc
     4141 caacagcttg cagtttttct tccgtatctg tggaaagctt gacctccaca tacacttcta
     4201 attgattttc acgatcttca tcgctgttaa attctaaata ttcgtaaaaa tgtgccataa
     4261 ttttgtcttt tcctatctca tcttaaatgg atttacgcca taaaatttca caatcaactt
     4321 taacgtcatc tattttctgt tgcgctaact tttgctgaat taattcaaag gtacgttcgg
     4381 caatttgttg gtggtcttgc ttaattgaat gaatatgaaa aggtagtgca ttcagtaaat
     4441 ggtgatcatc aaaggttgct aaatgcagtt cttgagtcaa taatttatcc atttgttggt
     4501 gttcagtcag atagcgcatt actccctcaa gtagggtaaa agaggctgtg aataccgctt
     4561 ctgggagcct gccaagtttt tcaactatct gagcgaacat ttgatagccc gattccggct
     4621 gatagtcttg atgcagaacc caattttcat caagtgccaa atgtgactgc tccaaacctt
     4681 cacggaagcc ttttaaacga ttttgacttg gcgagagtga aagttgtcca cctaagtaaa
     4741 aaaactcttt taagtgataa gcccgtacaa tattttccac caacatactg atactttgtg
     4801 tatcattact ggtgatagaa gggatattca acccagaaat atagcggtct agctgtaaca
     4861 ttggggtata ttgtgccgca ttttgataat aagtcggctc attatgtgtc ggagcagtaa
     4921 tcagtaaatc tacctgtctg tctaataaac gctctatcgc tttcttctca ccttcaaagg
     4981 tatcatccga gcaagcgatc actagctgta acccgttttc acggcataat ttctctaagg
     5041 ttcttgaggt cagagcaaag ccataattcg ttaaatcggg aatgactaaa ccgatcacat
     5101 tcgtgcgttg agcctgtaat gattttgcat atacattagc acgataaccg tgttttttag
     5161 cgatctcttt cactttttgg caggtttcgg atttgattct aaaatcattg ccccgcccat
     5221 ttaaaatcat actgactgtt gttttagata cgccgctgag ttccgcaata tcactgagcg
     5281 ttaggcgttt tttagtcaca cttatctcct tttagcataa aaatgggcat tactgcccat
     5341 tgctttattc tacgctaatt ggcaatactt ttgctacttt cacttgaatc ggacgagagc
     5401 tttttacgac attttcacgc ttagcgataa aaaagcgtga agtcagcact ttttccccgc
     5461 cgtttacgaa aatttccacc acagaacggt caaagaaaat ctcgattgtc tctaattgtt
     5521 caattttgca atgacgaacc gagccaaatt tttccatcaa ttctgtttgt tcggtttggc
     5581 tacgatctaa gctcaacacc ccattttcaa aacgtaagct gagcttttgc ccctgttcat
     5641 tgctgaaaaa atccaacaca agcggttgat tttccacaga aatttgcaag taggcagtat
     5701 ccaaattctc gattgcaaaa ttttctgaca tttcgaccgc ttgtaattcg cctacattca
     5761 cgattgggtt ttgtatcact ttgccgtttt gcagggaaag tttacgaggc aatgtcagca
     5821 ttgaatgcca ctgatattta tcagttgggt aagtgagatc aggcaagccg acccagccaa
     5881 acaaaatgcg atcggaattt tccaccgttt gcggtgcgta aaagtcaaag ccgtagtcca
     5941 gctcttcaat atgctctgcc cgtaatctgt tgccgtttag ctcgccaagt gcgtaagtgg
     6001 cgtggtagtt attttggaat tgatggcttt cacgcagttt gccttgtggc gaccacacaa
     6061 acagatcttt accaccaagt gagaacagat ccggacactc ccacataaac acattgctgt
     6121 tatcaaaatt gtggacttcc agttctgcga ttaaacgggg tgtggcattt aaatcgtcca
     6181 tttcataaat taacgccgtg ccggtcaagt tttcacgctg agcccccaac acaaaacgaa
     6241 ttttgccctc tgcggtaagg taaggtttcg ggtcacgcac gtgttcggtg tagcctgccg
     6301 gtgcttggtc gataatgcaa cgcttttcca ataatttgcc cgatttatca aaaatcgcga
     6361 tattttggtg aggaatgcgg gcattatctg atgggcggcg tgtattgccg gtgtaaaaag
     6421 cgacaatctt atcttgccat aaaatcgccc cacctgaata acagccgtgg gattcaaaca
     6481 gctcatcggg aatcagcaaa tcccctttac tgaacgtttg aaaatcggta gtgatgaaat
     6541 gctgccaatg tttcattcca tgtaatgccc cataaggaaa ccattgggcg aaaatatggt
     6601 atttttcacc atcgaaaatc aagccgtttg ggtcattaaa taagcctgtt tcgggagcga
     6661 gatgataggt tgggtaaaaa tcgggatcag ataaaacggt ttggcgaaga gcgtttaatt
     6721 cgccctcgct ttgtgcgtgc aggcttttgt atttgccgtt gttgaaaatg tgcatagagt
     6781 gttcctgtca tttcagaaat tacgatggtg caagcgtcca cgcttgtacc cttttgtaaa
     6841 aaatgaggca caagcgtgga cacttgcgcc atcattacat tattccgcca aaaatgcgtc
     6901 taactccgct ttattcggta atgccgacat cgcccctttt gctgtggtgg ctaacgcacc
     6961 ggaagcattt gctttgcgga tcacttcaac taacacagtt tcatcgtgcc aattcggcgt
     7021 ttgagcaaga ccggctaata atccgctgac aaaggcatct ccggcaccgg tggtatccac
     7081 aggtttcaag gctttgccgg caacgacttg gctttttccg ttgaaatggt agattgcacc
     7141 gtctttgcca agggtgataa taatcaattt ctccggatac tgagcggtaa tagcttgtgt
     7201 ggcttgttcc aaagtttctg tctcggttaa taaggtcagc tcttcttcgg aaaatttgag
     7261 aatatccgcc atcgccacca cagaatttac cactgttttc atttcatcaa ggctcttcca
     7321 gagcgattca cgcaagtttg gatcaaacga aacatagcca cccgcctttt tcactcggcg
     7381 aatcccttca atggtagtgg aacgggatgg gtcgttaatc aaggcaatag aacagcagtg
     7441 taagaaatca ccttggttaa attcaggtaa atcgccgatt tctaaaaatt ggtcggcact
     7501 cggatttacc ataaaagtaa aactacgctc accgttatct aagccaacaa tcacggtgga
     7561 agtgcggtgc tgagcgtcta aaatcatctg tttggtgcaa acattttctg cctgtaacac
     7621 ttctcgcata aatttaccca gagggtcgtt acccacacgc ccgataaatc ctgcctcaac
     7681 ccctaaacga gaaacgccta ctgcaacatt cgccggagca ccaccggcac attttaaata
     7741 gtgatgttcg ccgtcgggaa ttaaatccac caccgcatcg cctgttaccc aaatcttact
     7801 catctcatac acctttaatt agtcacaaaa caccaagcta aaacgattta gcatttattc
     7861 gattatatac taaaagaccg cttgtacata cctacaagcg gtcatttttt ctttaatttt
     7921 tacagattaa ccacgtattt acctacacct aaatcatctt ctttacgagt gcgggcaatc
     7981 acgctttctg ccgattccac cacacgtaat cccatttggt cttcggtacg aatcacttcg
     8041 ccacggagtg agttggtata aacatcggtg attttcacat cgacaaattt gccaatcata
     8101 tccggtgtgc caacaaagtt tactacacgg ttagtttcgg ttctgccggt taattccatc
     8161 aagtctttct tagacgggcc ttcaaccaaa atgcgttgtt ctgtaccgag cattgcacgg
     8221 ctaaattgca ttgcttggtg gttgatgcgt tgttgtaaac gggataatcg ctcttttttc
     8281 tcatcatcgg agacattatc aggcagatct gccgctggtg tacccggtcg agccgagtag
     8341 ataaagctaa agctcatatc aaagttcact tgctcgatca ctttcattgt ttgctcgaaa
     8401 tcctctgcgg tttcgcccgg gaagcctaca ataaagtccg aactaatttg aatctcaggt
     8461 cgaacagcac gcaatttacg gataatcgct ttgtattcca acgctgtgtg gttacgcttc
     8521 atcattgtta atacacggtc tgaaccactt tgaatcggta aatgtaagaa actgaccaat
     8581 tcaggtgtat cacgataaac ttcgataata tcatcggtaa attcaatcgg gtggctggtg
     8641 gtgtaacgta agcggtcaat accgtcaatc gctgccacta agcgtaataa ttcggcaaag
     8701 gtacaaatgc cgccatcaaa agtttcacca cggtaagcat ttacgttttg accgagtaaa
     8761 ttaacctcac gcacaccttg tgccgcaagt tgggcgattt caaataatac gtcatccacc
     8821 gggcgggaaa cctcttcgcc acgagtgtaa ggcacaacgc agaacgaaca atatttattg
     8881 cagccttcca taattgaaac gaatgctgta gggccttcgg cttttggctc cggcaagcgg
     8941 tcaaattttt caatttccgg gaaagaaata tcgacaatcg agcttttacc gccacggatt
     9001 tggttgatca tttcaggcaa acggtgcaaa gtttgtggcc cgaaaacaat atctacataa
     9061 ggggcacgat cacggatatg ctccccttct tgtgaagcca cacaaccgcc aacaccgata
     9121 atcaggttcg gtttatcttt tttccagttt ttccaacgcc cgagttgcga gaatactttt
     9181 tcttgtgctt tttcacggat agaacaagtg tttagcagca acacgtctgc atcttcaggg
     9241 ttttcagtca gttcaaaacc gtgagtagag tttaggagat ccgccatttt tgatgagtcg
     9301 tactcattca tttggcagcc ccaagtggta atatgtaatt tagccataac gtttaaaatt
     9361 aataaataat tcaataactt agaaaagaaa agcgtaaagc aatttattat
//
LOCUS       DANLTI010000106         9122 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.106, whole genome shotgun sequence.
ACCESSION   DANLTI010000106 DANLTI010000000
VERSION     DANLTI010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9122
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.106"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..310)
                     /locus_tag="PXB09_002051"
     CDS             complement(<1..310)
                     /locus_tag="PXB09_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234130.1"
                     /translation="MTNYKLPARKWYTLEQATKRIKQLTGEDIEIEDLLHYWYLRKLE
                     LSIYLNRNGNGDLIIGNHSFNKEEYIVLEQPQIIIREDGSIELEGKESEEEFELEHIF
                     K"
     gene            complement(428..622)
                     /locus_tag="PXB09_002052"
     CDS             complement(428..622)
                     /locus_tag="PXB09_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234131.1"
                     /translation="MSLESYIQQAEEMELLEKLDFVSDLLELEKVSEIEAYRILTAHG
                     EPKPQPAQEKLIGCVDFLDD"
     gene            complement(619..1569)
                     /locus_tag="PXB09_002053"
     CDS             complement(619..1569)
                     /locus_tag="PXB09_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HDL5234132.1"
                     /translation="MSLSTFAHALKLDKQGNVILFDDSPEEQAKLISRLKQNRLFKLL
                     NLVQTKHAKGEAIGLFTPIAGTTNTESGEEREPKQALAPAQKYHCEQINIDSYIRYEK
                     IDAYNLENSLEERLNQLLDDNLLRGLLMVGWQGVSRADTSNATNNQLAQDVKKGWLQK
                     IREGKPEAVINGATIGKEQQYKSLNALIKQGLGKISPAYAMGGDMIAICGRDIIADDV
                     IQLEHNDLSENLADLLTLCQQAKGGLKAVSIPYFPSNAILITRLDNLSLYLHLNNIRR
                     KAFDTPQKDSVETFYSLNVDYIVEDFNACCLIENIEVIEE"
     gene            complement(1580..2239)
                     /locus_tag="PXB09_002054"
     CDS             complement(1580..2239)
                     /locus_tag="PXB09_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234133.1"
                     /translation="MTLETFNQQKAKFHEQEKAVLAIQTELDKAKNILEALQNEKAEF
                     VARQKTNLANIGTLSADEYVEIKNKNSGLQARIEYYQALIVDLENKCYAEQEILFQQQ
                     NELKQIRRIILLEKAEVLFNQFIEQNKENLAEIYTYLFYSGKFKQNKNLTDESEEQAI
                     LAYLTENIMARIEKEQPLEKTLILYSEQLASFEQKSPMALHREKFEAKPTGLAELINN
                     L"
     gene            complement(2249..2455)
                     /locus_tag="PXB09_002055"
     CDS             complement(2249..2455)
                     /locus_tag="PXB09_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDL5234134.1"
                     /translation="MENTPAKQRFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGA
                     NSKVWLESEIQQWIQRKIEQHRNQ"
     gene            complement(2925..4139)
                     /locus_tag="PXB09_002056"
     CDS             complement(2925..4139)
                     /locus_tag="PXB09_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5234135.1"
                     /translation="MTATKKPLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEK
                     QESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRL
                     TDLDRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEE
                     LAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKG
                     GKNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKY
                     KGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAYHRKNWLDRRRGIMQ
                     EWADFVEQCKSI"
     gene            complement(4342..4417)
                     /locus_tag="PXB09_002057"
     tRNA            complement(4342..4417)
                     /locus_tag="PXB09_002057"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4382..4384),aa:Ile,seq:cat)
     gene            complement(4511..5248)
                     /gene="pgeF"
                     /locus_tag="PXB09_002058"
     CDS             complement(4511..5248)
                     /gene="pgeF"
                     /locus_tag="PXB09_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDL5234136.1"
                     /translation="MDKIIPNWNVPKHIHALTTLRTGGVSKPPFDSFNLGDHVNDEPQ
                     DIAQNRALLVEKFQLPQAPLFLTQTHSTRVIELPYSGDNIKADAIYTNQPNQVCLVMT
                     ADCLPVLFASQDGSEIAAAHAGWRGLCDGILEATVEKFNCPPHEISAWLGPAIGPNAF
                     QVGSEVADQFCAFDPRAKEALIEDSTTSGKFLGNLYQIATQRLNKLGITAISGGEYCT
                     YSQPELFFSYRRDKQTGRMATLIWRTE"
     gene            complement(5280..5666)
                     /locus_tag="PXB09_002059"
     CDS             complement(5280..5666)
                     /locus_tag="PXB09_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5234137.1"
                     /translation="MTVIHTENAPAAIGPYVQAVDLGNMVLTSGQIPVNPETGEIPSD
                     IVQQTRQSLNNVKAIIEQAGLTVADIVKTTVFVKDLNDFAKVNAEYQAFFQENEHPNF
                     PARSCVEVARLPKDVGIEIEAIAVRR"
     gene            5747..6748
                     /gene="yejK"
                     /locus_tag="PXB09_002060"
     CDS             5747..6748
                     /gene="yejK"
                     /locus_tag="PXB09_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDL5234138.1"
                     /translation="MSINVSEIVLHQLQKTEGENPELNTFLRENLLAISPEVDQMMLQ
                     LHQAYQSKAKAYGIFKPESVFAQQLNRLLEQETDFLPFSHSCAKMLAAELIKYPFADG
                     GTFILCRYTFLATEYLFIALIDSRNSMLVDEQLEIKRTQYLEIAQYDIACRINLTELK
                     LDATSNRYLTFVKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCEQGELSA
                     PQTREVKKQVFEYCKGQINSGEEIALNELSNALPTLNEIDFAQFTQEQEYGLEENIPP
                     MRNALKTLTKFSGSGKGVTISFNAELLGERLLWDELNDTLTIKGLPANLRDQLERNK"
     gene            6815..7156
                     /gene="bamE"
                     /locus_tag="PXB09_002061"
     CDS             6815..7156
                     /gene="bamE"
                     /locus_tag="PXB09_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDL5234139.1"
                     /translation="MKMKSLLAAMLLALGVTACSTVEKVVYRIDVPQGNYLEQDKIAQ
                     LKVGMTAEQVEYLLGTPMLKNIFETHRWDYVFIKREGYKDPEQRNLFIYFDAKGLVSK
                     IDDSNANAEQK"
     gene            7349..8689
                     /gene="gdhA"
                     /locus_tag="PXB09_002062"
     CDS             7349..8689
                     /gene="gdhA"
                     /locus_tag="PXB09_002062"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDL5234140.1"
                     /translation="MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPKYTQ
                     QGLLGRIVEPERVISFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMSELYRHIGADTD
                     VPAGDIGVGGREIGYMFGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFAES
                     MLATKGQQIEGKSVVISGSGNVAQYAAEKVIQKGGKVLTVSDSNGYVLFPESGMTEAQ
                     LQALLELKNERRERLSVYATEQGLKYFDGQKPWGVKCDIALPCATQNELDTEDAKELV
                     KNGCICVAEGANMPTTLGGVEVFIGAKILYAPGKAANAGGVATSGLEMSQNAIRLSWS
                     REEVDQRLFNIMKAIHENCVENGTEADGFVNYVNGANIAGFKKVANAMLEQGIV"
     gene            8851..>9122
                     /locus_tag="PXB09_002063"
     CDS             8851..>9122
                     /locus_tag="PXB09_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5234141.1"
                     /translation="MIITMKDIAKEANVSLGTVSNVLNGKSNVSLAKIEKVQAAVEKL
                     GYRKNIQASTLKSGTSNKIAIILPNITELKYACLYENLDLICTQND"
BASE COUNT         2506 a         1651 c         1911 g         3054 t
ORIGIN      
        1 ttttaaatat atgttctaat tcaaattctt cttctgattc tttgccttct aattcaatag
       61 agccatcttc tcttatgatt atttgtggtt gttccaagac aatatattct tctttattaa
      121 aagaatgatt gcctataatc agatcgccat ttccgtttct atttaaataa atacttaatt
      181 ctagctttct taaataccaa taatgtaata aatcttctat ttctatatct tcgccagtga
      241 gttgtttaat gcgttttgtt gcctgctcta aggtgtacca ctttctagcc ggtagtttat
      301 agtttgtcat tgctgtactc tcatttgatt tggttattgt tttttattaa tgatagcaat
      361 aatttcaaag ggtgcaagcg gtcgtttttt gttgcaaaaa tgcaaaaagc ccctttcggg
      421 gcttgggtta gtcatcaaga aaatctacgc aacctattag cttttcttgt gccggttggg
      481 gtttaggttc gccgtgggcg gttaaaatgc gataggcttc aatttcgctg actttctcaa
      541 gttctaacag gtctgaaaca aaatcgagtt tttctaaaag ctccatttct tccgcttgtt
      601 ggatatagct ttctaggctc attcttcaat aacctcaata ttttcaatta aacaacaggc
      661 gttaaaatct tctacaatgt aatccacatt gagggagtaa aatgtctcta cgctgtcttt
      721 ttgtggcgta tcaaacgctt tacggcggat attgtttaaa tgaagatata gcgaaaggtt
      781 atctaatcga gtgattaaaa tcgcgttgct tgggaagtag ggaatactta ccgcttttag
      841 tccgccttta gcttgttggc ataaggttaa taagtcggct aggttttcgc ttaaatcgtt
      901 gtgttcaagc tgaattacat catcagcgat aatatcccgc ccacaaatgg cgatcatatc
      961 tccgcccatt gcatacgctg ggctaatttt gcctaatccc tgcttaatca gagcatttag
     1021 gcttttgtat tgttgctctt tgcctatggt tgctccatta attaccgctt cgggcttgcc
     1081 ctctctgatt ttttgtagcc agcctttttt cacgtcttgg gcgagttggt tgtttgtcgc
     1141 gtttgatgta tctgcacggc ttacgccttg ccagccaacc attaaaagcc ctcttagaag
     1201 gttgtcatca agtaactgat ttaagcgttc ttctaagctg ttttcgaggt tgtaagcatc
     1261 gattttttca tagcgaatat agctatcaat gttgatttgt tcgcagtggt atttttgagc
     1321 gggtgcaagg gcttgttttg gctctcgttc ctctccgctt tcggtgttgg ttgtgccggc
     1381 tatcggtgtg aatagcccaa tcgcttcgcc ctttgcgtgc ttggtttgca ctaaattcaa
     1441 taatttaaaa aggcgatttt gttttaagcg gctaattagt tttgcctgtt cttcggggct
     1501 atcgtcaaat aaaataacgt taccttgttt atctagtttt aatgcgtggg cgaaagtgga
     1561 taaactcatt ttttacctct tataagttat taattaattc agctaagccg gtaggttttg
     1621 cttcaaattt ttcacggtgt aatgccattg gcgatttttg ttcaaaactt gctaactgtt
     1681 cagaataaag aattaatgtt ttttcaagtg gctgttcctt ttcaattcta gccattatat
     1741 tttctgttag atatgccaga atagcttgct cttcactttc atctgtgagg tttttatttt
     1801 gtttgaattt tccactgtag aataagtaag tataaatttc tgctaaattt tctttatttt
     1861 gttcaataaa ttgattaaat aatacttctg ctttttctaa taaaattata cgtctgattt
     1921 gttttagttc attctgctgt tggaataata tttcttgctc tgcgtagcat ttattttcta
     1981 aatcaacaat caacgcttga taatattcta tgcgtgcttg taaaccacta tttttatttt
     2041 tgatttcaac atattcatct gctgaaagcg tgccgatatt ggctaaattc gttttttgcc
     2101 gtgcgacaaa ttccgctttt tcgttttgca atgcctcaag aatatttttc gctttgtcta
     2161 attcggtctg aatagctaaa acggcttttt cttgttcgtg gaatttagct ttttgttggt
     2221 taaatgtttc aagtgtcata atttgccctt attggttgcg gtgttgttca attttgcgtt
     2281 gaatccattg ctggatttca ctttctagcc atactttgct atttgcccca atactgatac
     2341 tttggggaaa atcgccggct ttcattttgc gataaatctg cgtttctgaa agcgtagtta
     2401 cggctgaaac ttcatctatt ttcataaatc gctgttttgc tggtgtgttc tccattttgt
     2461 tttactccgt aaaaatttgc tttggcgtgc tattgcctgc taacgtgtga aagaataaat
     2521 catcttggat tttttgctat ttgttagggc tgtgaaagga gattttacag attagagggg
     2581 cttaattctg atttggaaaa cttgcaagcg gttatttttc tctgattttt tgcaagtttt
     2641 cagcggttct ttcatcgttc tgtcatcgag tttttaaaag tggtgtttct gcctgcgtaa
     2701 atttgcgttt tcttgcgtaa aattgcgtaa taaaaaacgg ctatatgaaa gtttttcacg
     2761 ctatacgggg caatgtttgg gcttaatttt gcatttgcgt agaaatcgag actttaagtg
     2821 tgcgggcgag gcgtgggata gacggcacgg gctgggagct gataggaaaa aatgaaaatt
     2881 tttcatcaag caaaaagaaa ggcggattgc tccgcctttg tcatttaaat gctcttgcat
     2941 tgttctacaa aatccgccca ttcctgcatt attccacgtc tgcggtctag ccagttttta
     3001 cggtggtatg cactcattac ggtgtctttg ttcgtgtggg ataaacaagc ctcaattact
     3061 agcgtttcag tagtaaaacg ttcgtgtaaa taggtgctgg caatgcttct taaaccgtga
     3121 gccactaaaa gccctttata ttttccaccg cttaagcgtt ttattgcatt attcacggtt
     3181 tggctattag ccggtttgtt tcggtctgtt cggtgtgtaa aaatatgttt atggtgtccg
     3241 ttatatttct tcatttcctc taggattgcg atagcttgtt ttgttagcgg tacagaatgc
     3301 ggattttttc cgcctttcat tctatctgcc ggaatgttga gcgtcttagt ttcccaatct
     3361 atatcgctcc attgcaccgc tacggcttca aacggtctaa gaatattcaa gagttgccat
     3421 tcaactaata atttaatttg aggcgttcta tttgatttct gcaagtcttg cataaattcg
     3481 gctaactctt cgggcattat tgctggctgg tgtgtcgtgc ttacgctgga aaacgccttt
     3541 ttaatgacgc tgattgggtt aaaattaatt ctcccacaca ataccgcata atcaagaatt
     3601 tctattaaat tccctgctat tctgtgcaaa gtgtcgggca ttatccgatc taagtccgtt
     3661 aagcggttga ttgtatcggt taaggtaaaa tcttccagcg tatagccttc aaaacgtggg
     3721 aataaatgat tttctaaccg ctgtaagcat ttttccattg ttttaggctt gcattttccc
     3781 tttgatagct tccaatcagc ccatttatag gcgaaagatt gaatagattc ttgcttttcc
     3841 ttagcttctc tttgcatttt ggctaaatgc tcgaaagggt ctaagccttg taaaacaagg
     3901 gtatttagtt cgtctctctt taagcgtgct tcggctaagc tcatttgcgg atagctaccg
     3961 attctatttt ttgtgcttcg cttgcctgtt ttggggctga tatagctata aatccatact
     4021 ttcgcttttt tctgtgcaag aataaatagc ccgttgctgt ctgcgatagg cttcgcattt
     4081 ggggaatatt tgagattttt tagtaatgtg tctgaaagtg gttttttagt tgcagtcatt
     4141 tcttctaatc cttgatatat aagggtttat cgaagtttat gatccctaaa ttttcccgtt
     4201 ttcaaaatag ggatcatttt agggatcata aacactaaga tacaatgcaa ctaaagaaga
     4261 caataagaga ctataaaaga atctaagttc ttgattttat agtaaatttg agacaatgaa
     4321 agacaatatg caacgcttag atggtccccc cagccggact tgaaccagcg accaagcgat
     4381 tatgagtcgc ctgctctaac cactgagcta tggggggatt tgaaaagtgg ttggaattat
     4441 agagaaaaac cgagtagtcg tctagaggca gaagattact cggttaatta ttgaacgaga
     4501 gaaaataggg ttattctgtt cgccaaatta aggttgccat tcgcccggtt tgtttgtctc
     4561 ggcggtagga aaaaaacagt tctggttggc tgtaggtgca atattcaccg cctgaaatgg
     4621 cggtaatgcc taatttattc agacgttggg tggcaatttg gtaaagattt cctaaaaatt
     4681 taccgcttgt agtgctgtct tcaataaggg cttctttcgc tcttgggtca aaagcacaga
     4741 attggtctgc cacttcactc ccgacttgaa aagcattcgg tccgatagcc ggccctagcc
     4801 aagctgatat ttcgtgtggc gggcagttga atttctctac cgtcgcctct aatatgccat
     4861 cgcataaccc acgccagccg gcgtgtgccg ccgcaatttc cgacccgtct tggctggcaa
     4921 ataataccgg caaacaatct gcagtcatca ctaagcagac ttggtttggt tgattggtgt
     4981 aaatcgcatc ggctttaata ttatcacctg aatagggaag ttcaatcact cgggtgctgt
     5041 gagtttgggt taaaaacagc ggagcttgtg gtaattgaaa tttctcaacc aataaagcac
     5101 gattttgagc gatatcttgt ggctcgtcat taacgtgatc acctaagttg aaactgtcaa
     5161 aaggcggttt gcttactccg cctgttctta aggtcgtcag tgcgtgaata tgtttaggca
     5221 cattccaatt tggaataatt ttatccattt gcaaaaaatc tcaagaaaat gaccgcttgt
     5281 tatcggcgta ctgcaatcgc ttcgatctca atgccaacat cttttggtaa acgagccact
     5341 tctacgcaag aacgagccgg aaaattaggg tgttcgtttt cttggaagaa ggcttggtat
     5401 tccgcattta cctttgcgaa gtcgttaaga tctttgacaa atacggtggt ctttacaata
     5461 tcggcaacgg ttaagccggc ttgttcgata atggctttca cgttgttcag agattggcgg
     5521 gtttgttgca caatatcact cgggatttcg ccggtttcag gattcacggg aatttgccca
     5581 gaagttaaaa ccatattgcc taaatcaact gcttgcacat aaggcccaat cgctgccggt
     5641 gcattttctg tgtggataac tgtcatcttg tgttcctctt aatgaaaaat aaacggatta
     5701 atgataatat cttttcttat tatttggaat aaagagaagt gaattaatga gcattaatgt
     5761 ttctgaaatc gtgttacatc aattacaaaa aacagagggc gagaacccgg agcttaatac
     5821 gtttttgcga gaaaatttat tggcaatttc ccctgaagtc gatcaaatga tgttgcaatt
     5881 acatcaagcc tatcaaagta aagcaaaggc ttacggtata tttaaaccgg agtcggtttt
     5941 cgctcaacag ctcaaccgct tgttggagca agaaaccgat tttttacctt ttagccatag
     6001 ctgtgccaaa atgcttgcag cagagctgat taaatatccg tttgccgatg gtggcacttt
     6061 tattttgtgt cgttacactt ttttagctac cgaatatttg tttattgcgt tgattgatag
     6121 ccgtaattca atgctggttg atgagcagtt agagattaaa cgcacgcaat atctcgaaat
     6181 tgcacaatat gatattgcct gccgcattaa tttaactgaa ctgaaacttg acgcaacgtc
     6241 aaatcgctat ttaacttttg tgaaaggcag agtagggcgt aaaattgccg atttctttat
     6301 ggatttttta agtgcggaag aagggtttaa tccacaattg caaaatcaaa ccttgttgca
     6361 agcggtgagc gattattgtg agcaagggga gttatctgcc cctcaaactc gagaagtgaa
     6421 aaagcaggtg tttgaatatt gtaaagggca gataaatagt ggagaggaaa ttgcgttaaa
     6481 tgagctttcc aacgcattgc caacactgaa tgaaatcgat tttgcccaat ttacgcaaga
     6541 gcaagaatac ggcttggaag agaatattcc gcctatgcga aatgccctta aaaccctgac
     6601 gaaattttcc ggttcgggca aaggagtaac gattagcttt aacgcagaat tattaggaga
     6661 gcgtttactt tgggatgaac taaacgacac actgacaatc aaaggattac cggcaaatct
     6721 gcgtgaccag ctggaacgta acaaataatg gaaaattttt atcagtttag gtattatctc
     6781 gttatctgaa ttttggatta tcaaaaggtc aattatgaaa atgaaatctc ttttagctgc
     6841 aatgttgctt gcactgggtg taacggcttg ttcaaccgtt gagaaagtgg tgtaccgtat
     6901 tgatgtaccg caaggcaatt acttagaaca agataaaatt gctcaactta aagtcggtat
     6961 gacagcggaa caagttgaat atttgcttgg tacaccaatg ttaaagaaca tttttgaaac
     7021 ccaccgttgg gattatgtgt ttattaaacg tgaaggttat aaagatcctg aacaacgcaa
     7081 tctgtttatt tattttgatg ctaaagggtt agtatcaaaa attgatgaca gcaatgcgaa
     7141 tgcagaacaa aaataggacg atttgttggt tcgaaaagcc cacttttaaa agtgggctta
     7201 tttttttgaa taaaaaataa gcatttaaac ttaatttttc ttattttaat gataaatttt
     7261 tctaatctat cttttcaaag ctaaaattgc ttgctagact tcgctcatct taaatacaca
     7321 acatcatcaa tttattcagg agtataatat gagcgattta aacgcccttt tccaaaaaat
     7381 caaacaacgt gatccgaacc aagccccttt ccatcaagcg gttgaagaag tgttcggtag
     7441 ccttgcccct ttcttagcta aaaatccgaa atatacccag caaggtttat tagggcgtat
     7501 tgttgagcct gagcgtgtaa ttagcttccg tgtcacttgg gttgatgata aaggtcaagt
     7561 gcaagtaaac cgtggttacc gtgtacaaat gaactcagca atcggtccat acaaaggcgg
     7621 tattcgtttc cacccaaccg ttgatttagg cgtattaaaa ttcttagcct ttgagcaagt
     7681 attcaaaaat gcgttaacga cattgccaat gggcggtggt aaaggtggtt cagactttga
     7741 cccgaaaggc aaatctgatg ccgaagtaat gcgtttctgc caagcgttta tgagcgaatt
     7801 atatcgccac attggtgctg atactgacgt tcctgcaggc gatatcggcg tgggaggtcg
     7861 tgaaatcggc tatatgttcg gtcaatacaa aaaattacgc aatgaattta cttcagtatt
     7921 aaccggtaaa tcgctgactt ggggtggtag cttaattcgt ccggaagcaa ctggttatgg
     7981 tgcggtgtat tttgcagagt ctatgttagc gactaaaggt cagcagatcg aaggaaaatc
     8041 agtggtaatt tccggttcgg gtaacgtggc acaatatgca gctgaaaaag tgattcaaaa
     8101 aggcggtaaa gtattaacgg tttcagattc taacggttat gtcttattcc ctgaatccgg
     8161 tatgacagag gcacaattac aagcattatt agagttgaaa aacgaacgcc gtgaacgctt
     8221 atctgtgtat gcaacagaac aaggcttaaa atactttgac ggtcaaaaac cgtggggtgt
     8281 gaaatgtgac atcgctttac cttgtgcaac ccaaaacgaa ttagataccg aagatgctaa
     8341 agaattagtg aaaaacggct gtatttgtgt ggcagaaggt gcaaatatgc caaccacatt
     8401 aggtggtgtt gaagtcttta tcggtgcgaa aatcctttat gctccgggta aagcggctaa
     8461 cgcaggtggt gtggcaacct caggtttaga aatgagccaa aatgcaattc gtctatcttg
     8521 gagtcgtgaa gaagtagatc agcgtttatt caacattatg aaagcaattc acgaaaactg
     8581 cgtagaaaat ggtactgaag cagatggttt cgtaaactat gtaaacggtg cgaatattgc
     8641 tggtttcaaa aaagtggcaa atgcgatgtt agaacagggt attgtttaat ttattatccc
     8701 tattattcaa gaactgcctc gatatatcga ggcagttttt ttattttagg ttgtagctag
     8761 agacaagcta aattgaaatc gtatttcatt tgccaattat ggtaaaatct atgccaatct
     8821 cagttttagc agtatgtgaa agggcagtat atgatcatta cgatgaaaga tatcgcaaag
     8881 gaagcaaatg tttcgttagg aacagtatcg aatgtattaa acggaaaaag taatgttagc
     8941 ttagctaaaa tagaaaaagt acaagctgcc gttgaaaagt tgggttatcg taaaaatatt
     9001 caagcctcta cgttaaaaag tggcacaagt aataaaattg ctattatatt gcccaatatt
     9061 acagagctga aatatgcctg tttatatgaa aatcttgatt taatttgtac gcaaaatgat
     9121 tt
//
LOCUS       DANLTI010000107         8976 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.107, whole genome shotgun sequence.
ACCESSION   DANLTI010000107 DANLTI010000000
VERSION     DANLTI010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8976
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.107"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..6059
                     /locus_tag="PXB09_002064"
     CDS             <1..6059
                     /locus_tag="PXB09_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5234142.1"
                     /translation="KVIFNQTTQKMEVVSELARSQGKAASSTDKRGTIKLAAASILGG
                     ATLISGMAAFMLSATPAEAAVIIDRIEVQQKAPKKVVNGGIDIYTNTSLATDSITNPY
                     NYFNPGSLSYADRTKLQESNNSVNKEKDSRLLYKSNTTSAIVIGHNAVALDNNRKSRG
                     KPKASGIAIGDYSYSGGGLSIAIGSFSRTASIGSVALGTSARAEGFNSFAAMRQSAAI
                     ADYSTAIGSTSWANATASFAIGASATALGDRSFAIGSGTPQTVDGSYGHENRRSIYDG
                     QNNTLAFGTDAFSIGTKAKTNGNHSFAIGTNAWSGGFKLENSNISELGQVINPDTAKV
                     ANNAFALGTNTRANSNDTLAFSTNASATGDGSIAFGVNSNTTGIGAIAFGNASKAWKS
                     NAISIGWNANSHAEKVISIGSHSNASKDGAMAIGDTANSSGNNSVAIGYSANVSKANA
                     TAVGTRANITHEGGTAIGFEAKSKGNYATAIAYNSTAKGKNSIAAGVNSTVSGIRAAA
                     LGYNNTVSGKDTFVLGSNVTVKTKGSVILGSDSTEATATKEDTATVGTLKYSSFAGDE
                     NVVDGDYVSVGNATNARQIKFVAPGKIASNSTDAINGSQLYAVADTLVKTGFNITADH
                     SGLGGGAKEDNVKLGETVKYTSTDKNVVTTVTNNTIDFGLSDNISVGGKPGKDGSVGV
                     KGADGKDGVTIKPEAIVFHGVDGVNGKDGKDGKASIKVEKGAKGLDGNDGKDGESKTR
                     IVYEKPNGDKEEVATLNDGLKFGANDGKVHDAKLNTQVDIKGATTNTDWAKFDAGKNI
                     MTQVVGNTITVALAKDLAGLDSATFGTQGDSTVINKDGVTIAKKDPNDATKSNVTLTE
                     DGLSNGGNQITNVDSGLKGKDGQPVKLTEAAGDVLNNAVNVGDLKNTVTETVTEVTTD
                     AFGLKDENNKEFKQNLGTTAKIIGDGNVKTNVVEKDGGHALEVSLVNNITVGKDGEPG
                     KVGIAGKDGKDAIALDGKDGAITVGRPGKDGIDGTIGVNGKDGSAVVLNGKDGSIGLN
                     GTNGKDGLTIKGTEGKPGLVGKDGLPGKDGVTRIQYQPTDGNGDPIGEPEQVATLNDG
                     LHFKGDDATLVSKKLNETLEIIGGADKDKLTANNIGVNSKDGKLSVQLAKDLKDLNSA
                     TFKPQDGENGQEGKGPTTVVNNNGVTITPKDGTDGKAVKLTEDGLDNGGNQIVNVKSG
                     IDGLAGKDGINGKDGKPITSVNDLTDDQLKEVGTNAANINDVVNASNDIIEKGFSIAA
                     DNGETDHVKLGETVKYTSKDKNIITTVSDNVIDFTLNNDFTIGGPGKDGSIGVKGADG
                     TVGVTLNGKDGSIGLTGPKGADGKDGASATISVKDGAKGLDGNDGKDGESKTRIVYEK
                     PDGTTEEVATLNDGLRFVGDDGKEIVKKLNETLKISGGDTDLTNLSDNNIGVVNNNGA
                     LTVKLAKDIDLTKDGSVTIGDTTVNNDGLTIKDGPSVTKAGINAGDKKIINVQDGEIS
                     ATSKDAVNGSQLYQVQEVANAGWNLTANGKDKGNVKPGATVDLNNKDGNIIITKEGNN
                     VTFGLKNNLTIGGKDGKDGQIGIAGKDGKDGVTIKGDGTITAGRDGKDGVDGSIGATG
                     KDGASVVLNGKDGSIGLTGPKGADGKDGASANIAVKDGAEGVDGTNGKDGLPGENGKT
                     RIVYETKDKDGKTVTEQVATLNDGLIFSGNNEDVKNRQKLNTEVKVKGEGVDKTASEN
                     FKSASGNINVKANGTDTLEVQLAKAIDLTEDGSVTTGDTTVNNNGLTIKDGPSVTKGG
                     IDAKGTKITNVKDGDVTATSKDVVSGSQLYNAMQNTGWYLTVDGNVAETSEKGAQRVN
                     NNGKVAVSGGKNIVVSRKGSTVEVATSSNLEFDSVKVGGTTISSTVAKDGVNELNIAG
                     SKNAQTRITNVAPGVKGTDAVNVNQLKGAENRLNNRISNVDKDLRAGIAGALAAGNLY
                     HVTQPGKSMVSAGVGAYRGQGAIAVGYSRLSDNGKVGIKFSVNSNSRGDTGAAASVGY
                     QW"
     gene            complement(6281..7666)
                     /gene="hflX"
                     /locus_tag="PXB09_002065"
     CDS             complement(6281..7666)
                     /gene="hflX"
                     /locus_tag="PXB09_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDL5234143.1"
                     /translation="MLNESLPNSEENSAFGFALSEASQTTEAASPTDPENQDKAILVH
                     LYLGQHKDVENLLEFKTLAESAGVEVLATLTTSRQSSHIKYYVGQGKAEGIAEAVERL
                     GATVVLVNHQLSPAQTRNLQSLCGCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRH
                     LSTRLVRRVTNQDQQKGGAVGLRGPGETQLETDRRLIKVRIQQLLNRLEKVSKQRNQN
                     RKTRQKADIPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGT
                     TILADTVGFIRFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQVLDE
                     IGALDIPTLLVFNKIDKLEGVEPHIERNADGTPVAVYLSAQENSGIELLFQAIQERLR
                     SNLVCENLLLPVTAGAIYAQFKAENCIKTEHFNEFGERIISIEINEVQWNKWVKQFPD
                     LAEYIELAKWG"
     gene            complement(7686..7958)
                     /gene="hfq"
                     /locus_tag="PXB09_002066"
     CDS             complement(7686..7958)
                     /gene="hfq"
                     /locus_tag="PXB09_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDL5234144.1"
                     /translation="MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPARALSHNNNNQAQHAQPAAEVTEQAE"
     gene            complement(8027..8950)
                     /gene="miaA"
                     /locus_tag="PXB09_002067"
     CDS             complement(8027..8950)
                     /gene="miaA"
                     /locus_tag="PXB09_002067"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011271810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDL5234145.1"
                     /translation="MGPTASGKTDLAIALRQELPVEVISVDSALIYKGMDIGTAKPSK
                     EELALAPHRLIDILDPAESYSAMNFHADALREMADITSQGKIPLLVGGTMLYYKALLE
                     GLSPLPSADPAIRAEIESRAAQHGWATLHQELVKIDPIAGARINPNDSQRINRALEVF
                     YITGKTMTELTAQQGEALPYNILQFAIAPQDRAVLHQRIEQRFHKMIELGFEEEVKRL
                     FLRKDLHINLPSIRCVGYRQMWEYLQGDISLDEAIFKGICATRQLAKRQITWLRGWQG
                     ELTWLDSLAPTSSKAKMVEKIDHYLKNCDNI"
BASE COUNT         2787 a         1609 c         2104 g         2476 t
ORIGIN      
        1 ttaaggttat ttttaaccaa acgacgcaaa aaatggaagt tgtgtctgaa cttgctcgat
       61 cgcaaggtaa agccgcttct tctactgata agcgcggtac tattaaatta gcagcggcta
      121 gcattctagg gggagcaacc cttatcagtg gaatggcagc ctttatgctt tctgctacac
      181 cggcagaagc ggcggtgatt attgatagaa tagaagtaca acaaaaagca ccaaaaaaag
      241 ttgttaatgg tggtatagat atttatacaa acactagttt ggctacagat tctattacga
      301 atccatataa ctactttaac ccaggtagct tatcctatgc agacagaact aagcttcaag
      361 aatctaataa ctctgttaat aaggagaagg attctagatt attgtataag tctaatacta
      421 cctcagcaat tgtaattgga cacaatgctg tagctttaga caataacaga aaaagtagag
      481 gaaaaccgaa agcgtcaggc atagccattg gtgattattc atattctgga gggggattgt
      541 ctattgcaat tggttctttt tctcgtactg caagtattgg ttctgtagca ttaggtacct
      601 ctgcacgtgc ggaaggattt aactcatttg ctgcaatgcg tcaatctgct gcaattgcag
      661 attattctac tgcaattggt tcaacatctt gggcaaatgc tacagctagc ttcgccattg
      721 gtgcttcggc tacagcgcta ggtgaccgtt cttttgcgat tggtagtggt actccacaga
      781 cagtggatgg aagttacggt catgaaaata gacgttcaat ttatgatggg caaaataata
      841 ctttagcatt tggaacagat gcattctcaa tcggtactaa agcgaaaact aatggtaacc
      901 attcatttgc cattggtact aacgcttggt ccggtggctt taaattagag aattcaaata
      961 tttctgaatt aggacaggta attaatcctg atacagcgaa agtagcaaat aatgcatttg
     1021 ctttgggtac gaatactcgt gcaaattcga atgatacttt ggcgttttca acaaatgcaa
     1081 gtgcaacagg tgatggttct atcgcctttg gtgtaaattc gaatacaaca ggaatcggtg
     1141 cgattgcttt tggtaatgct tctaaagcct ggaaaagtaa tgctattagc attggttgga
     1201 atgcaaactc tcatgcagaa aaagtgatca gtattggttc gcattctaac gcgagcaaag
     1261 atggtgcaat ggcaattggt gatacggcta attcaagtgg taataattct gttgcgatag
     1321 gttatagtgc taatgtaagt aaggcgaatg cgacagcagt aggtacacgt gccaatatta
     1381 cgcatgaagg tggcacagca attggttttg aggccaaatc aaaaggtaat tatgcaactg
     1441 ctattgctta caactcaacc gcaaagggta aaaactcaat tgcagccggt gtaaatagta
     1501 ctgtttcggg tattcgtgct gcggctttag gttataacaa tacagtttca ggtaaagata
     1561 ctttcgtatt aggttctaat gttactgtta agacaaaggg ttctgtaatt ctaggttctg
     1621 actctactga agcaaccgca actaaagaag atactgcaac tgttggcaca ttaaaatata
     1681 gcagctttgc tggcgatgaa aatgttgttg atggtgatta tgtgagtgtg ggtaatgcaa
     1741 ccaatgctcg ccaaattaag tttgttgcac cgggtaaaat tgcttccaat tcaacagatg
     1801 cgattaacgg ttcacaactt tacgcagtag ctgacacttt agttaaaact ggctttaaca
     1861 ttacagcgga tcactctggc ttaggaggtg gtgctaaaga agacaatgtg aagttaggtg
     1921 aaactgttaa gtacacctca accgataaga atgttgttac aaccgtaaca aataatacca
     1981 tcgattttgg cttatccgat aacatctctg ttggtggtaa accaggtaaa gatggttcag
     2041 ttggtgttaa aggtgctgat ggtaaagatg gtgtaacaat taaaccagaa gccatcgtat
     2101 tccacggcgt tgatggcgta aatggaaaag atggaaaaga tggtaaagca tcaattaaag
     2161 ttgagaaagg tgctaaaggt cttgacggca acgacggtaa agacggcgaa agcaaaactc
     2221 gtattgttta cgaaaaacca aatggtgata aagaagaagt tgcaacactt aacgatggct
     2281 taaaattcgg tgcgaatgat ggcaaagttc acgatgcgaa attaaatacg caggtggata
     2341 ttaaaggtgc tacaacaaac actgattggg ctaagtttga tgctggtaaa aatatcatga
     2401 cacaggttgt tggcaatacc attactgtgg cgttagcaaa agatctagca ggcttagata
     2461 gtgcaacatt cggcacacaa ggtgattcta cagttatcaa taaagatggt gtaacgattg
     2521 ctaagaaaga tcctaatgat gcaactaaat ctaatgttac cttaacagag gatggcttaa
     2581 gcaacggtgg taaccaaatc accaatgttg atagcggctt aaaaggtaaa gatggtcaac
     2641 ctgttaaact tactgaggca gcaggtgatg ttcttaacaa tgcggttaac gtcggtgact
     2701 tgaaaaatac tgttactgag actgttactg aggtgacaac agatgcgttt ggtctaaaag
     2761 atgagaacaa caaggagttt aagcaaaact taggtacgac agctaagatc attggtgatg
     2821 gcaatgttaa aacaaacgtt gttgagaaag atggtggcca tgcattagaa gttagcctag
     2881 tgaataatat tactgttggt aaagatggtg aaccaggtaa agttggtatt gctggtaaag
     2941 acggtaaaga tgctattgct ttagatggta aagatggagc tatcactgta ggtcgccctg
     3001 gcaaagatgg tattgatggt actatcggtg taaacggtaa agacggttct gcagttgttc
     3061 ttaacggtaa agatggttca atcggcttga acggtacaaa tggtaaagat ggtttaacca
     3121 ttaaaggtac tgagggcaaa ccagggcttg ttggtaaaga tggtttacca ggtaaagatg
     3181 gtgtaactcg tatccaatat cagccaacag atggcaatgg tgatcctata ggtgaaccag
     3241 agcaagtagc tactttaaat gatggtttac actttaaagg tgatgatgca acactagtat
     3301 ctaagaaatt gaatgaaacc ttagaaatca ttggtggagc tgataaagat aagctaactg
     3361 caaataacat cggcgtaaac agcaaagatg gtaaattatc tgttcaatta gctaaagatc
     3421 ttaaagactt gaactcagct acattcaaac cacaagatgg agagaatggt caagaaggta
     3481 aaggtccaac aacagtagta aataataatg gcgtaactat cacgccaaaa gatggcacag
     3541 atggtaaagc agttaagctt actgaagacg gtctagacaa tggcggcaac caaattgtta
     3601 acgtgaagag cggtattgac ggtttagcag gtaaagacgg cattaacggt aaagatggta
     3661 agccaatcac ttcagtgaac gacttaacag acgatcaatt aaaagaagtt ggtactaacg
     3721 ctgcgaatat taatgatgtt gtaaatgcaa gcaacgatat tatcgagaaa ggctttagca
     3781 ttgcagcgga taatggtgaa actgatcacg ttaaactagg tgaaactgtt aagtacacct
     3841 ctaaagacaa aaacatcatc acaacagtaa gtgataatgt gattgacttt acgttaaata
     3901 acgattttac cattggcggt ccaggtaaag atggttcaat cggtgttaaa ggtgcagatg
     3961 gtacagttgg tgttacttta aacggtaaag atggctctat cggcttaacc ggtccgaaag
     4021 gcgctgacgg taaagatggt gcaagtgcaa ctatctctgt aaaagacggt gctaaaggcc
     4081 ttgacggtaa cgacggtaaa gatggcgaaa gcaaaacccg tatcgtttat gagaaaccag
     4141 acggtacaac tgaggaagtt gcaacactga acgatggctt aagattcgta ggtgatgacg
     4201 gtaaagaaat cgttaagaaa cttaatgaga cgttaaaaat ctcaggcggt gatactgatt
     4261 taacgaacct gtccgataac aatatcggtg ttgtaaacaa caatggtgcg ttaacagtta
     4321 aattagcgaa agacattgat ttaacgaaag atggttctgt aactattggt gatactacgg
     4381 taaataatga tggtttaact atcaaagatg gcccaagtgt aactaaagcc ggtatcaatg
     4441 caggcgataa gaaaatcatt aacgttcaag acggtgaaat ttctgcaacc agcaaagatg
     4501 cggtaaatgg tagccagtta tatcaagtgc aagaagttgc taacgcaggt tggaacttaa
     4561 cagcaaatgg taaagacaaa ggcaacgtta aaccaggagc aacagttgat ctaaacaaca
     4621 aagacggtaa cattattatt actaaagaag gtaataacgt gaccttcggc ttgaaaaaca
     4681 acttaaccat tggtggtaaa gatggtaaag acggtcaaat cggtattgct ggcaaagacg
     4741 gtaaagatgg cgtaaccatt aaaggtgacg gcacaattac tgcaggccgt gacggtaaag
     4801 acggtgttga tggttcaatt ggagctacag gtaaagatgg cgcttctgtt gtattaaacg
     4861 gtaaagatgg ctctatcggc ttaaccggtc cgaaaggcgc tgacggtaaa gatggtgcaa
     4921 gtgcaaatat tgcagtgaaa gatggtgctg aaggtgttga tggtacaaat ggtaaagatg
     4981 gattaccggg tgagaacggt aagactcgta tcgtttatga gaccaaagat aaagacggta
     5041 aaactgtcac agaacaagtt gcaaccttaa atgatggttt aatcttctct ggtaacaatg
     5101 aagatgtgaa gaaccgtcag aaactgaata ctgaagttaa agtgaaaggt gaaggtgtgg
     5161 ataaaacagc ttctgaaaac tttaagtcag catcaggcaa catcaatgtg aaagcgaatg
     5221 gtacagacac attagaggta caattagcga aagcaattga tttaacggaa gatggttctg
     5281 taacaactgg cgacacaacc gtaaataaca atggtttaac cattaaagac ggcccaagtg
     5341 taactaaagg cggtattgat gcgaaaggca cgaagatcac taacgttaaa gatggtgatg
     5401 taacggcaac aagtaaagat gttgtgagcg gtagccagtt gtataatgca atgcagaata
     5461 caggctggta tctcactgtt gatggtaatg tagctgaaac ttcagagaaa ggtgctcaac
     5521 gtgttaataa caatggtaaa gtggccgttt caggtggcaa aaacatcgtt gtttcacgta
     5581 aaggttcaac tgttgaagtg gcaacctcaa gcaatcttga atttgattca gtgaaagttg
     5641 gtggtacaac tatcagttca actgttgcaa aagatggcgt aaatgagctt aacattgcag
     5701 gtagcaagaa tgcgcaaaca cgtattacga acgttgctcc gggtgtgaaa ggcactgatg
     5761 ctgttaatgt gaatcagttg aaaggtgcag aaaatcgtct gaacaatcgt atcagtaacg
     5821 tagataaaga cttacgtgca ggtattgcag gtgcattagc cgcaggtaat ttatatcacg
     5881 taacacaacc tggtaaatcg atggtttcag ccggtgtagg tgcttaccgt ggtcaaggag
     5941 ctattgctgt aggttattct cgtttatcag ataatggtaa agtgggtatc aaattcagtg
     6001 ttaactctaa cagccgtggt gatacaggtg ctgctgcaag cgtaggttat cagtggtagt
     6061 aactgcttga ttaagctttt cttccccact tttggggaag aataaataaa atccttcaaa
     6121 tagaacgggg aaatctggtt tatttgaggg atttttttat tggctaaatt ggatttaatg
     6181 gataaaacaa gcggtcaatt ctttacactt ttttgcaaaa aaacgtaaag aattgaccgc
     6241 ttgcataatt taaatataac ttactcagaa gtgagattaa ttacccccat tttgccagct
     6301 caatatattc ggctagatcc ggaaattgtt tcacccattt gttccattgc acttcgttaa
     6361 tttcaataga gataatccgt tcaccgaact cattaaaatg ctcggtttta atgcagtttt
     6421 ctgctttaaa ttgtgcgtaa attgcaccgg cagtaaccgg gaggagcaag ttttcacaca
     6481 ctaagttact gcgaagcctt tcttgaatgg cttggaataa cagctcaatg ccgctatttt
     6541 cttgggcgga aagatacacg gcaactggcg tgccatcggc attgcgttca atatgcggtt
     6601 ctacaccttc taatttatca attttattga ataccaataa agtaggaata tctaacgctc
     6661 cgatttcgtc caacacttga tttaccgcat caatattttc gtttttgcgt tcgtctgagc
     6721 cgtcaatgac gtggagcagt aaagtagctt cggtggtttc ttgcagggta gatttaaagg
     6781 ctgaaactaa atcgtgcggt agaaaacgga taaaacctac cgtatcggca agaattgtcg
     6841 tgccgacatc ttgcacctga atccggcgta aagtcgggtc aagggtcgca aaaagttgat
     6901 cggcagcata aacaccagct tgggtaatcg cattaaacag ggtagatttg ccggcattgg
     6961 tatagcccac taaggatact gttggaatat cggctttttg tctggttttt cgattttgat
     7021 tgcgttgctt gctgactttt tccaagcggt tgagtaactg ttggattcgc actttaatca
     7081 aacggcgatc ggtttcgagc tgtgtttcac ctggaccacg caagccaact gctccgcctt
     7141 tttgttggtc ttgattagta actcggcgaa ccaaacgggt cgataaatgg cgaagttgtg
     7201 ccagctcgac ttgtagtttg ccttcgtgcg atcttgcccg ttgagcgaaa atatccaaaa
     7261 tcaagccggt tctatccacc acacggcagc cgcataacga ttgcaaatta cgggtctgag
     7321 ccgggctaag ttgatggttc accagcacta ctgttgcccc gagtcgttct accgcttcgg
     7381 caattccctc cgctttgcct tgccccacat aatatttgat atgcgaactt tggcggctgg
     7441 tggtaagcgt tgccagcact tcgacaccgg cagattctgc cagcgtttta aattccagca
     7501 aattttcaac atctttatgt tgcccgagat agagatgcac caaaatggct ttatcttgat
     7561 tttctggatc ggtaggcgag gcggcttctg tagtttggct tgcttcagat aaagcaaagc
     7621 caaacgcaga attttcttct gagtttggca atgattcgtt taacattggt tgagtaataa
     7681 tgttattatt ccgcttgttc agttacttcg gcagcaggct gagcgtgttg ggcttggttg
     7741 ttattgttat gcgataacgc acgggcagga acaaccgttg aaatagcgtg tttatacacc
     7801 atttggctta cagtgttttt taataaaatc acaaattggt cgaacgactc gatctgacct
     7861 tgtaatttaa tgccgttaac taaataaatt gaaacaggaa tacgctcacg acgaagtgca
     7921 ttcaaatatg gatcttgtaa agattgacct tttgccattg ttattttcct ttttatagtt
     7981 gtgtgatttt taagacacca aataatgcga taagtgccaa aggcgtttag atattatcac
     8041 aattctttaa ataatgatcg atcttttcca ccatttttgc tttagaactg gtcggagcta
     8101 aactatctaa ccaagtcagt tcgccttgcc agccacgcag ccaagtaatc tgccgttttg
     8161 ccagctggcg ggtggcacaa atgcctttaa agatcgcctc atcgagcgaa atatcgcctt
     8221 gcaaatattc ccacatttgg cggtagccca cacagcgaat cgagggcaaa ttaatatgca
     8281 aatctttgcg taaaaataac cgcttgacct cctcttcaaa gcctagctca atcattttgt
     8341 gaaagcgttg ttcaatccgt tggtgtagaa ctgcacgatc ttgaggagcg attgcaaatt
     8401 gtaagatatt ataaggtaga gcctcacctt gctgagcagt gagttcggtc atcgttttgc
     8461 cggtaatgta aaaaacttct aacgctcggt tgatccgttg gctgtcattt gggttaattc
     8521 ttgcaccggc aatcgggtcg attttcacta attcttgatg caatgttgcc cagccgtgtt
     8581 gtgccgctcg gctttcgatt tcagcccgaa tggctggatc ggcagagggc aggggagata
     8641 acccttcaag caatgccttg taataaagca ttgtgccacc caccaagagc ggaattttac
     8701 cctgtgaggt aatatctgcc atttcacgca acgcatcagc gtggaaattc atcgccgaat
     8761 agctctcggc agggtctaaa atatcaatca agcgatgcgg tgcaagggca agctcttcct
     8821 tgcttggctt tgccgtgcca atatccattc ctttgtaaat taaggcagaa tcaacactga
     8881 ttacctcaac cggcaattct tggcgtaaag caatagctaa atcggttttc ccggaggcag
     8941 tcggccccat taaaaaaagg gcaaggggtt ttttat
//
LOCUS       DANLTI010000108         8972 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.108, whole genome shotgun sequence.
ACCESSION   DANLTI010000108 DANLTI010000000
VERSION     DANLTI010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8972
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.108"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            15..233
                     /gene="zapB"
                     /locus_tag="PXB09_002068"
     CDS             15..233
                     /gene="zapB"
                     /locus_tag="PXB09_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HDL5234146.1"
                     /translation="MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTL
                     RSEYEQLKVEQQNFQDRLRSLLGQIDNV"
     gene            289..870
                     /locus_tag="PXB09_002069"
     CDS             289..870
                     /locus_tag="PXB09_002069"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014064645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDL5234147.1"
                     /translation="MAKLYFYYSSMNAGKSTTLLQSSYNYQERGMNTLVYTAAIDDRF
                     GVGKVNSRIGISQEANLFTADTNLFAEIKALHSNKALHCILIDEAQFLTKTQVYQLSD
                     VVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADELEELKTICDCGKKAHFVVRLNEK
                     GEAIKDGEQIQIGGNDRYLSVCRYHYKQKLGKL"
     gene            complement(961..2079)
                     /locus_tag="PXB09_002070"
     CDS             complement(961..2079)
                     /locus_tag="PXB09_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDL5234148.1"
                     /translation="MTTTYFHLMAKPSSFHCNIQCEYCFYLSKEQTIPPEKSQFMNDE
                     TLQNYIRHYIEANQSQRVDFVWQGGEPTLLGLDFYKQAVKYQQKFANGKQITNAIQTN
                     GIALNRQWASFFKENHFLVGLSIDGLSDIHDRYRISTNGKPTFERVKSAVDLLKEVGV
                     EFNTLTVVNDRNWQRGRETYQALKALGSRYMQFIPVVESHKGELQPFSVPPQGYGQFL
                     VDVFHEWLPDRGQIFVIEFDNLLGQWLGYPSNNCVFRPTCGSSLVVEACGDVYSCDHF
                     VYPDYHIGNLNQQQLAEIVSSAAQRQFGQNKQAKLSQACLNCKFRILCHGGCPKHRIV
                     PQANSENHNYLCPSYQQFFAETSSVMRQMSEQIRFAGK"
     gene            complement(2169..3617)
                     /locus_tag="PXB09_002071"
     CDS             complement(2169..3617)
                     /locus_tag="PXB09_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5234149.1"
                     /translation="MNNIIYILLDQVRKDMLGTYGHQVVKTPNLDRLAKDGIRFNNAF
                     TPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEIPQQNPNIAGVEGYNSFVIGKWH
                     VGTKSVPEDYGIAGHNFDGYGYPGSQVYKNLVFNQPPTHSNRYREWLAEKGYDAPEVS
                     RAYFGDNPHLRVQELCGLLSGSREQTIEWFIIDEAKKYIQASLDEKKPFFAWINFWGP
                     HTPCVVPEPYYSMYDPSQVVLDESFFKPLEGKPNHFRTISQMWGMWEASEDRWKEVIS
                     KFWGYITLIDDAIGELFRFLEENNLYENTFLVATADHGDAMGAHKMIEKGEFMFETTY
                     NIPLIIKDPHSTRVNEVDDNLVYLHDLTSTVYDVANQPIPTAFQGESILPITRQSQNN
                     DRKGLLCQLAGHFVYFEQRMWRRKDYKLVFNATDRCELYDVRKDPEEMHNLFYDEAYQ
                     AVKKEMLEEMRQEMKRLNDPLENWVYRIIDEI"
     gene            complement(3764..5461)
                     /locus_tag="PXB09_002072"
     CDS             complement(3764..5461)
                     /locus_tag="PXB09_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDL5234150.1"
                     /translation="MLLTIITFLVVTGLVGYISWLKTRNDDLSTSKGYFLAGRGLSAT
                     VIGCSMVLTSLSTEQLIGVNANSYAGNFSIIAWTVPAVIPLCFLALYLLPKYIRNGYT
                     TIPEFFENRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETAFGLSYGA
                     AITYTVIAIGIVGAIYAIFGGLKAVAVSDTWNAVLLVIGALLVPVFALIYLGNGSMAE
                     GVKIITTTHVEKWNAVGSATDAVPWPTIFTGIMVVHFFYWTTNQAIVQRALGARDLKA
                     GQKGILIAALFLLLLPLILNLPGLLSFHILGEGLKPIDVSYPELVNKTFPTVLQGFFI
                     AALFGAILSTFNSFLNSAATIYCKDLLPSISKKQFTDAELISYAKKVSAVMAVITMIF
                     GPLLMFGTDGIFLLTKRFAGFVNIPIVALFVIGLFNKTVSGKAARIALLAHVILYFCI
                     VWVFDVKINFVYVQAGLFVFDVALMLILGIFLKRATPYEDNKINHANVDLTSWEYAPL
                     AVASIVLGLFTLYAFLSPLGLASPDGNPAMVLAVYAVLQAVVCVVFFAKCKGKKAVN"
     gene            complement(5605..6156)
                     /locus_tag="PXB09_002073"
     CDS             complement(5605..6156)
                     /locus_tag="PXB09_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDL5234151.1"
                     /translation="MNNMPTPEQLMSCQLSVMSDLEKGVVIYSQGYHAREFYFLKSGL
                     IGLYHMLENGKESLVRVYKANDYFGFRTFFGDNRYHCSARVLQPAELIRITPLNFIEF
                     WSNNSALIISLLKQLSTELQDAEHRLSMVSYQKTQERVMNSIHYLHQRYPNYHWTNRE
                     IAEFAGCETETAIRLRRELKKIS"
     gene            6255..7064
                     /locus_tag="PXB09_002074"
     CDS             6255..7064
                     /locus_tag="PXB09_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5234152.1"
                     /translation="MTMTVIIILIICGIIVNITSALFGIGGGVLMMPILHSLFPELPL
                     QVISACSLTIVIGSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDN
                     SIIAIFILTLLTLSFKTLFHKPRVKAIVPPKPKEAVSNATMCSLGGLIAGITGIGGGS
                     IMAPIVTQIRSVSPKQVAVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFA
                     IVGTVVISSLFTVYFSMKLRNILSPELTTKLLGVILFTIACYMGFLQYLFT"
     gene            complement(7081..7773)
                     /gene="tsaB"
                     /locus_tag="PXB09_002075"
     CDS             complement(7081..7773)
                     /gene="tsaB"
                     /locus_tag="PXB09_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDL5234153.1"
                     /translation="MKPSILALDTATEACSVALQYNGNITFLDEISPRSHTQRILPMV
                     DELLNQANIELKEVNYLVFGRGPGSFTGVRVGVSVAQGLAMGANLPVVAVSNLKAMAE
                     EAYQKLGATKVIALIDARMNEVYFAQFERKGEEWNEVVAEQVCSPEVAISQFQMSEET
                     VVVGTGWAAYSQFSEQNLPLVISDITLPSSRYMLSIAETEIQKGNIQSAFEIEPVYLR
                     NEVTWEKLPHKQ"
     gene            complement(7860..8942)
                     /gene="aroG"
                     /locus_tag="PXB09_002076"
     CDS             complement(7860..8942)
                     /gene="aroG"
                     /locus_tag="PXB09_002076"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDL5234154.1"
                     /translation="MSYIKNDDVRITSIEELLPPIALLEAYPASDVAAETVAKTRQSI
                     HKILHGADDRLLVVIGPCSIHDPKAALEYAQKIKAMRADPKINQNLEVVMRVYFEKPR
                     TTVGWKGLINDPYLNETFALNDGLRIARKVLSDINDLSVPTAGEFLDMITPQYVADFM
                     SWGAIGARTTESQVHRELASGLSCAVGFKNGTNGSVKIALDAISSAKSPHHFLSVTKF
                     GHSAIVSTAGNPDCHIILRGGDSATNYDADSVAAACAAIEKSGGRPHVMIDFSHANSQ
                     KQFKRQMDVCADVCNQIAGGSDFISGVMIESHLVEGRQDLIEGKGLEALVYGQSITDG
                     CIGWEDSEKALFALAEAVEKRRNFAK"
BASE COUNT         2491 a         1987 c         1893 g         2601 t
ORIGIN      
        1 agagggaatt tactatgtca ttatcggttt tagaccaatt agaagaaaaa attaaacaag
       61 ctgttgaaac tattcaatta cttcaattag aagttgaaga attaaaaggt aaaaacgatg
      121 cagcgaaaca agaaaacgac accttgcgca gcgaatatga acaattaaaa gtggaacaac
      181 aaaacttcca agatcgttta cgttcacttt taggtcaaat cgacaacgtt taattctatt
      241 ttcagcacaa acggctaaat ttttagccgt tttttatttg ttacagctat ggcaaaactc
      301 tatttttact actcctcaat gaatgcaggc aaatctacta ctctgcttca atcttcttat
      361 aattaccaag aacgtggaat gaacacttta gtttataccg ccgctattga tgaccgtttc
      421 ggtgtgggga aagtcaactc tcgtatcggt atttcacaag aagccaattt atttaccgct
      481 gataccaatc tatttgcgga aattaaggca ttacactcaa acaaagcgtt acactgtatc
      541 ttgattgatg aggctcagtt tttaactaaa acacaggttt atcaattaag tgatgtggtc
      601 gataaactca aaattccggt gctttgctac gggctacgca ccgatttcca agctgaatta
      661 tttgaaggta gcaaatattt gttggcttgg gcagatgagc tggaagaact caaaaccatc
      721 tgtgattgtg gcaaaaaagc ccattttgtc gttcgattaa atgaaaaagg cgaagccatt
      781 aaagacggtg aacaaataca aatcggcggc aatgatagat atctctctgt ttgccgttat
      841 cattacaaac aaaagttagg taagctataa gctacaagaa gcagcaagcg gttaaatttt
      901 cgggaatttt tgcaaatttt cagcgaaatt taaccgcttg tttgtgttat ttacctctct
      961 ttactttcct gcaaaccgaa tttgctcact catttgtctc atcacactcg aagtctcggc
     1021 aaaaaactgt tggtaagagg ggcaaaggta gttgtggttt tcgctgtttg cttgggggac
     1081 gatgcggtgt ttggggcagc cgccgtggca aagtatgcgg aatttgcagt ttaggcaggc
     1141 ttgcgagagt tttgcctgtt tattctgccc gaattggcgt tgggcggctg atgagacgat
     1201 ctctgccagc tgctgttggt tgaggttgcc gatgtggtaa tcgggataga cgaaatggtc
     1261 gcaactgtac acatcgccac aggcttccac caccagcgag ctgccacagg tcgggcggaa
     1321 tacacagttg ttggagggat agccaagcca ttgcccgagc aggttatcaa actcgatcac
     1381 aaaaatctgc ccacggtcag gcagccattc gtgaaaaaca tccactaaaa attgcccgta
     1441 gccttggggc ggaacggaaa agggttgtaa ttcccccttg tggctttcca ccaccggaat
     1501 gaactgcata taacggctac cgagggcttt gagggcttga taggtttctc tgccccgttg
     1561 ccagttgcgg tcgttcacca ccgtgagggt gttaaattcc acgccaacct ctttcaataa
     1621 atcgaccgca cttttcaccc gttcaaaggt cggtttaccg ttggtggaaa tgcggtagcg
     1681 gtcgtgaatg tcgctcagtc cgtcaatgga taagcccacc agaaaatgat tctctttgaa
     1741 aaagctcgcc cactggcggt ttagggcaat gccgttggtt tggattgcgt tggtgatctg
     1801 cttgccgttt gcaaattttt gttgatattt gaccgcttgt ttgtagaaat ctaagcccag
     1861 cagggtcggc tcgcccccct gccacacaaa atccacccgt tggctttggt tggcttcaat
     1921 gtaatgacga atgtagtttt gcagcgtttc atcgttcata aactgcgatt tttctggcgg
     1981 aatggtctgt tccttgctca gataaaaaca gtactcgcac tgaatattac agtgaaaact
     2041 gctgggtttt gccattaggt ggaagtaggt ggtggtcatt gtatctctaa attgtagggg
     2101 cggactttat gttcgcccat tgtttacatt aattttcggg cgggtataaa acccgcctct
     2161 acaaacaatt atatctcatc aataatccga tacacccaat tttccagtgg gtcgttgagg
     2221 cgtttcattt cctgtcgcat ttcttccaac atctcttttt tcacggcttg gtaggcttcg
     2281 tcataaaaga ggttgtgcat ctcttcgggg tcttttctga catcgtagag ttcgcagcgg
     2341 tcggtggcgt tgaagaccaa tttgtaatcc ttacgccgcc acattcgctg ttcaaaatag
     2401 acaaaatgcc ctgccagttg gcacaacaag cctttgcggt cgttgttttg gctttgtctg
     2461 gttatcggca gaatactctc gccttggaaa gcggtcggga tcggttgatt tgccacatca
     2521 tacacggtgg aagtgagatc gtgcaaataa acgaggttgt catcgacttc gttcaccctt
     2581 gtagagtgcg gatctttaat aatcagcgga atgttgtagg tggtttcaaa cataaactcg
     2641 cctttttcga tcatcttatg cgcccccatc gcatcgccgt ggtcggcggt agcaacgagg
     2701 aaggtatttt catagagatt gttctcttcc aagaaacgga acagctcgcc aatggcatcg
     2761 tcaatcagcg tgatgtagcc ccagaattta gaaatcacct ctttccaacg atcttcgctc
     2821 gcctcccaca ttccccacat ttgtgaaatg gtgcggaagt ggttcggttt gccctcaagc
     2881 ggtttgaaga aactctcgtc caataccact tggcttgggt catacattga ataatacggc
     2941 tccggcacta cacacggagt gtgcggcccc cagaagttga tccacgcaaa gaacggtttt
     3001 ttctcatcaa gggaggcttg aatgtatttt ttcgcctcgt caatgataaa ccactctatt
     3061 gtctgctcgc gactgccgga aagcaaacca cagagttcct gcacacgcag gtgtggattg
     3121 tcgccaaaat aggctcgact gacttcgggt gcgtcatagc ccttttccgc cagccattca
     3181 cgataacggt tggagtgtgt tggcggctga ttaaacacga ggtttttata cacttggctg
     3241 cccgggtagc catagccgtc aaagttatga ccggcgatgc cataatcttc gggaacggat
     3301 tttgtaccaa cgtgccattt gccgatcaca aaggagttat agccctccac gccggcaata
     3361 ttagggtttt gttgtggaat ttcgcctgtg ccgccttttt cgccgttttt gataatcccg
     3421 tggctggacg gcattaagcc ggtaaacagc gaggtgcgag ccggcccgca gaccgaagcc
     3481 ggcgtaaagg cgttgttaaa ccgaatgccg tctttcgcca agcgatccaa attcggggtt
     3541 tttaccacct gatgcccgta agtgccgagc atatctttac gcacttgatc taacaaaata
     3601 tagatgatgt tattcataat gacctcttta aggcttgtta ataaccgata aattatcaag
     3661 tttcggagat ctgttcccct ctttagcaaa gaggggattt ttgatctcga gccttttccg
     3721 ttcttggtat ttttatacta atgaggagaa ggctcacatt catttaattc accgcctttt
     3781 tgcctttaca ttttgcaaaa aacacgacac aaaccaccgc ttgtagcaca gcatacaccg
     3841 ccagcaccat tgccggattg ccgtctggtg aggctaaacc gagcggagag aggaaagcgt
     3901 atagcgtgaa taagcccaac acgatagaag ccactgccag tggggcatat tcccagctgg
     3961 ttaagtccac attggcgtgg ttgattttgt tgtcttcgta tggagtcgca cgttttagga
     4021 aaattcctaa aatcagcatt aacgccacat cgaacacgaa caagccagct tgcacataca
     4081 cgaagttgat ttttacatca aacacccaaa cgatgcagaa gtagagaata acgtgtgcga
     4141 gtaaggcaat gcgtgcggct ttgcctgaga cggttttgtt gaataagccg atgacaaaca
     4201 gtgccacaat cggaatgttc acaaaaccgg cgaaacgttt ggtcagcaag aaaataccgt
     4261 ctgtgccgaa catcagtaac ggcccaaaga tcatcgtaat caccgccatt accgcagaga
     4321 cttttttcgc ataacttatc agttccgcat ctgtgaactg ttttttgctg atagacggca
     4381 gtaagtcttt acagtaaatg gttgccgctg agtttaagaa cgagttgaag gtactcaaaa
     4441 tcgccccgaa cagtgcggca ataaagaagc cttgtagcac ggttgggaaa gttttattca
     4501 ctaattcagg gtaagacaca tcaatcggtt tcaagccctc acctaaaata tggaaactga
     4561 gtaagcccgg taagtttaag ataagcggta gcaataataa gaacagtgcc gcaattaaga
     4621 tccctttttg accggctttt aagtctctcg cccccaaggc acgttgcaca atggcttggt
     4681 tggtcgtcca gtagaagaaa tgcaccacca taataccggt gaaaatggtc ggccaaggca
     4741 ctgcatcggt ggcactaccc accgcattcc atttttcaac gtgagtagtg gtgatgattt
     4801 tcaccccttc tgccatactg ccattaccta aatagataag tgcaaacacc ggcactaata
     4861 atgccccaat gactaacaag accgcattcc aagtgtctga caccgccacc gcttttaagc
     4921 caccgaaaat ggcataaatc gccccaacaa taccaatcgc aatcaccgta taggtaatcg
     4981 ctgccccata gcttaagccg aaggcagttt caaggttgaa gattttattg aaggcaatcg
     5041 caccggtgta aagtgcagtc ggaatgacga tgaaaagata gaacaccaaa aacaagcccg
     5101 acataatcaa acgggtttgg cggtcgaaac ggttttcaaa gaactccgga atggtggtat
     5161 aaccgttgcg gatatatttc ggcaacagat aaagtgccaa gaagcaaagc ggaattaccg
     5221 ccggcacagt ccacgcaata attgagaaat taccggcata agagttggca ttcacgccga
     5281 taagttgctc ggtagaaagg gaggttaaga ccatcgaaca gccgataacc gtagcactca
     5341 agccacgccc tgccaagaaa taacctttag atgtcgaaag atcgtcgttt ctggttttta
     5401 gccaagagat atacccgact aatccagtta caaccagaaa ggtaattatt gttaataaca
     5461 tattcttcac ctcaatatga ctatataaat gatatatccc attagagacg gcaatagcat
     5521 aaatcttatt tttaacgata gaatatgatg tttgtcataa tagatatgtg atggtgatca
     5581 caactatgaa taatttatga caatttaact gattttcttt aattctcgcc ttaatcgaat
     5641 ggctgtttcg gtttcacaac ctgcaaattc ggcgatttca cggttagtcc agtgataatt
     5701 gggataacgt tggtgtaaat aatgaatact gttcattacc cgctcttgcg ttttttgata
     5761 ggaaaccatt gataaacgat gctctgcgtc ttgtaattct gtcgagagct gttttaacag
     5821 agagataatt aaggcggaat tattcgacca aaactcaatg aaatttaagg gggtaatacg
     5881 tatcaattct gccggctgta acacccgagc cgagcaatgg tagcgattat cgccaaaaaa
     5941 ggttctaaac ccaaaataat cgttggcttt atataccctc accaagctct ctttaccatt
     6001 ttcaagcata tggtacagcc ctattaatcc gctttttaaa aaataaaatt ctctggcgtg
     6061 ataaccctga gaataaatga cgactccttt ttctagatca gacattacac ttaattggca
     6121 agacatcaat tgttcggggg ttggcatatt gttcattgat tatccttatt attttatttt
     6181 ttccatatat gattgcgatc ataatccttt atttagaaaa ttttgcatac ttatcacact
     6241 ttaggagatg gattatgaca atgaccgtga taattatttt gatcatttgt ggcattatag
     6301 tcaatatcac ttctgcacta tttgggattg gcgggggtgt tttaatgatg ccgattttac
     6361 attcactgtt tcctgaactg cctctccaag tgatttccgc ctgctctctt accattgtga
     6421 ttggttcagc cactatcaat ttatgcttat tccaccatca acagataaaa atcaatcgaa
     6481 aaaatgtgtt gatttggtca cttgcgatga tgttaggcgt acaaattggg tttgaactca
     6541 gttttctttt ctctgataac agcattatcg ctatctttat tctaaccctg ctgacacttt
     6601 catttaaaac cctatttcac aaaccaagag ttaaagcaat agtaccacct aaaccaaaag
     6661 aagcagtatc taatgccaca atgtgcagtt taggcggttt aattgcaggt attaccggca
     6721 ttggcggcgg ttcgattatg gctccgattg tcacgcaaat acgctcggtt tcaccgaaac
     6781 aggttgcagt ttatactaac tatatgatgg tgattggcgg aatcggcaat ttatatggct
     6841 acttatcccg cccttttgtg ttgaattcaa ccttagcaac ttggcaaatc ggctatgtga
     6901 attttgcaat tgtcggcacc gtagtgataa gttctctctt tactgtctat ttttcaatga
     6961 aattacgcaa tatcttgagt cccgaattaa ctactaaatt acttggtgta atcctattca
     7021 ctattgcctg ttatatgggc tttttgcaat atttattcac ttaaccataa gttcaataga
     7081 ttattgctta tgaggtagtt tttcccaagt aacttcatta cgcaaataca ccggttctat
     7141 ttcaaaagca gattggatat tgcctttttg aatctcagtt tcagcaatcg aaagcatata
     7201 tcggctggaa ggcaaggtaa tatcactgat aacaagcggt agattttgct cagaaaattg
     7261 cgaatatgcc gcccaacctg tgccaaccac cacagtctct tcactcattt ggaattgact
     7321 tattgcgact tctggcgaac agacttgttc agccaccact tcattccatt cttcaccctt
     7381 tcgttcaaat tgagcaaagt aaacttcatt cattcgggca tcaattaagg caattacctt
     7441 tgttgcacct aatttttggt atgcttcttc tgccattgct tttaagttag aaacagctac
     7501 caccggcaaa ttcgctccca ttgccaaccc ttgtgccaca cttacaccga ccctcacacc
     7561 ggtaaaactg cccggcccac gtccgaatac taaataattt acttctttga gttcgatatt
     7621 ggcttgatta agtaattcat ctaccatcgg caaaatacgt tgagtatggg aacgagggct
     7681 gatttcatct aagaacgtga tatttccgtt atactgtaac gctacagagc aagcctctgt
     7741 tgcagtatct aaagcaagaa tgctgggttt catcatatgt ttagtttgaa taaattaaat
     7801 ttgctttaag gttaaacaaa taaagggcga attatattcg ccctcggttc aagaaaagat
     7861 tattttgcaa aatttctgcg cttttcaacc gcttcagcaa gtgcgaataa cgctttttca
     7921 ctatcttccc agccaatgca gccgtctgta atactttgtc cgtaaactaa cgcctctaaa
     7981 cctttgcctt caattaagtc ttggcgacct tctaccaagt ggctttcaat catcacacct
     8041 gaaataaagt ctgatccacc tgcaatttgg ttgcacacat cagcacaaac gtccatttgg
     8101 cgtttgaact gcttctggct gttagcgtgg ctgaaatcga tcatcacgtg tggacgtccg
     8161 ccggatttct caatcgcagc acaagccgct gcaacggagt cagcatcgta gttggttgcg
     8221 ctatcgccac cacgcaaaat aatgtgacag tcaggatttc ctgctgttga aacaatcgca
     8281 gaatgcccga atttagtgac cgataagaaa tggtgtggcg attttgcgga agaaattgca
     8341 tctaatgcaa ttttcacact accattcgtg ccgtttttaa aacctaccgc acaggataaa
     8401 ccagaggcta attcacggtg gacttgagat tcagtcgttc tcgccccaat tgctccccag
     8461 ctcataaagt cagccacata ttgtggtgta atcatatcca aaaactcgcc ggcagtcggc
     8521 acgcttaaat cattaatatc agataatact ttacgggcaa tgcgtaaacc atcgtttaag
     8581 gcaaaggttt cgttcaaata agggtcgtta attaagcctt tccaaccaac ggttgtacgg
     8641 ggtttttcaa aatagacacg catcaccact tctaagtttt ggttaatttt cggatcagca
     8701 cgcattgctt taattttttg tgcatattct aatgccgctt tcgggtcgtg aatggagcaa
     8761 ggtccaatca ccactaataa gcgatcatcc gcaccgtgta aaattttgtg gattgattga
     8821 cgggttttag caacggtttc cgctgcaaca tcacttgccg gataggcttc cagtaatgca
     8881 ataggtggta gtaattcttc aatactggta attctgacat cgtcattttt gatataagac
     8941 attgtgttca ctctctaaat aaaatgaaaa ta
//
LOCUS       DANLTI010000109         8774 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.109, whole genome shotgun sequence.
ACCESSION   DANLTI010000109 DANLTI010000000
VERSION     DANLTI010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8774
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.109"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            170..886
                     /locus_tag="PXB09_002077"
     CDS             170..886
                     /locus_tag="PXB09_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5234155.1"
                     /translation="MKKTLLTLLFGCVVTAQAQDIKFVMEPSYPPFEMTEEKGEIIGF
                     DVDIANAICKEMNANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKKQVLFSEPY
                     FPSSAAFIAKKDTDFAKVKTIGVQNGTTYQHYLAKEKKEYNVKSYASYQNAILDVQNG
                     RIDAIFGDVPVLAEMARKHEGLDFVGEKINNPNYFGDGLGIATHLKNQVLVDQFNAAL
                     KTIKENGEYQKIYDKWMGGK"
     gene            complement(956..1834)
                     /locus_tag="PXB09_002078"
     CDS             complement(956..1834)
                     /locus_tag="PXB09_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HDL5234156.1"
                     /translation="MKNLYKWPAAQSLYPNQGKKSYAGKRFRYRLRSWLHHSKIKQFE
                     QFVTQNPQLIPLLNARPNYSYPVAHRFLDKRFSAKQRLQKITDNLLFLPQKLAHLPPL
                     WEQAVNFGEIIADFELWLNINEHQPMEGFWALELRHRPTNQLVYLLTFGKLDEALLIA
                     VIQGPNFEGSKELVKQLTKSCHGLRPAYLMVETMKALTAVLGYQSLLGIPQKYQNKSR
                     WVQSKRYVVDYDAIFAESGGKPGNYWQLPLELESKKIDEIPSKKRSMYRKRYEMLANL
                     KQTMELMLKTYTGLNG"
     gene            complement(1910..3235)
                     /gene="hslU"
                     /locus_tag="PXB09_002079"
     CDS             complement(1910..3235)
                     /gene="hslU"
                     /locus_tag="PXB09_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDL5234157.1"
                     /translation="MMSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDL
                     RQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRK
                     KLREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKD
                     ALKVMLDEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQ
                     RDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQGRLPIRVELKSLT
                     KEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARR
                     LHTVLERLMDGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL"
     gene            complement(3492..4013)
                     /gene="hslV"
                     /locus_tag="PXB09_002080"
     CDS             complement(3492..4013)
                     /gene="hslV"
                     /locus_tag="PXB09_002080"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDL5234158.1"
                     /translation="MTTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVV
                     TGFAGSTADAFILRDLFEKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDS
                     EFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDI
                     DIYSNYNHVIEEV"
     gene            complement(4074..4787)
                     /gene="sfsA"
                     /locus_tag="PXB09_002081"
     CDS             complement(4074..4787)
                     /gene="sfsA"
                     /locus_tag="PXB09_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDL5234159.1"
                     /translation="MKFPPLSHGILLRRYKRFLADIQLPNGEQITLHCPNTGAMTGCA
                     NPGDTVWFSTSHNPKRKYAHTWELTQTQAGDFICVNTLRANQLVQEALENQWISELAD
                     YQHILPEQKYGSENSRIDFLLKSDLLPDCFVEVKSTTLLTENGVGMFPDAKTERGQKH
                     LRELTKIAEQGLQAVIFFAILHTGIERFEVAKQIDPKYAELFAQAIAQKVQVLSYKMA
                     ISLENGQPIAATLTKKCEF"
     gene            complement(4803..5672)
                     /locus_tag="PXB09_002082"
     CDS             complement(4803..5672)
                     /locus_tag="PXB09_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5234160.1"
                     /translation="MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALP
                     FFIPAYKKIQKNQHIKVWLISFLTFPLYVILQFSGLKLTSAASAVALLGLNPLLTVLV
                     GYFCFKKQATRLDFILSLFACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYL
                     SKEILQSVKVIDLTKIMLVQGAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSL
                     AILLWNKGISQSSPILAGILLALEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLS
                     VLLPMMKRYKRLI"
     gene            complement(5673..6065)
                     /locus_tag="PXB09_002083"
     CDS             complement(5673..6065)
                     /locus_tag="PXB09_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5234161.1"
                     /translation="MKSPILGFHHIALIVSDYEKSKHFYTRILGAEIIAETYREQRAS
                     YKLDLRFKDGSQIELFSFPETPPRFTSPETCGLRHLAFRVENIEYAIAFLEQHQLPHE
                     GIRIDEITGKRFTFFRDPDDLPLEFYEV"
     gene            6149..7294
                     /gene="mutY"
                     /locus_tag="PXB09_002084"
     CDS             6149..7294
                     /gene="mutY"
                     /locus_tag="PXB09_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDL5234162.1"
                     /translation="MNSNSPFPLAKAKASDPFAKAVLAWFEQYGRKHLPWQQNKTLYQ
                     VWLSEVMLQQTQVATVIPYFARFMERFPTVIDLANASIDEVLHLWTGLGYYARARNLH
                     KAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRY
                     FAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAMMDLGAMICTRTKPKCLLCPLQE
                     NCKTNAMQAWDSFPAKKPKKTLPERQTYFLVLKSGSKVLLQKREAKGIWGGLFVFPQF
                     ESLEALKRSDFMQNLQISQQLTAFRHTFSHFHLDITPVLVETDLKKTSENSPLVVEEK
                     AGNYLSKVSSNADYWYDLHQHNEVGLATPVKRILDELAFSVKNEIKD"
     gene            7298..7567
                     /locus_tag="PXB09_002085"
     CDS             7298..7567
                     /locus_tag="PXB09_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDL5234163.1"
                     /translation="MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIK
                     KQTMIVNEKKLSMMNPEHRKLLEQEMVNFLFEGKEIIIEGYKPVE"
     gene            7584..8675
                     /gene="mltC"
                     /locus_tag="PXB09_002086"
     CDS             7584..8675
                     /gene="mltC"
                     /locus_tag="PXB09_002086"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDL5234164.1"
                     /translation="MKKYAKYLPMLAIIPFLIACGSNKSTKKPKSTRVDYSKDTNGLD
                     ILAGQFSHNIDDIWGSNELLVASKKDYVKYTDKFYTRSHISFEEGVITIETLGNQNHL
                     RNSIIHTLLMGRDPKGIDLFASGDAPISSNPFLNGQVEDQFGRNITNVAIANDFATYL
                     LQNKVQTRRLKNGQTVSFVTIKMVAGHIEVRARQYLPLVRKMAKQYGIEPSLILGIME
                     VESAFNPYAISYANAIGLMQVVPRTAGRDIFARKGMGGQPSREYLYNPSNNIDAGTLY
                     LTILRDEYLDGIEDPVAKRYAMISAYNSGAGAVLRVFDSDRYSAIDRINDLSSDAVYR
                     ILTTAHPSSQARNYLRKVTTAREKYRNIR"
BASE COUNT         2553 a         1762 c         1854 g         2605 t
ORIGIN      
        1 ttcttttggg ttgttttttt gagatagagg aatcaagagg attgagaaac tacatctcaa
       61 tttgatgtgt ttgtatgaca taaaacaaac tttatgaaaa gaagactttt tttaagaaag
      121 taactgcgtt aaagtggtaa tccttataat gaaaacacag ggacttttta tgaaaaaaac
      181 acttttgacc cttttattcg ggtgtgtggt tactgcgcag gcacaagata tcaaatttgt
      241 gatggagcca agctatcctc catttgaaat gaccgaagag aagggagaaa ttatcggttt
      301 tgatgtggat attgcaaatg ctatctgtaa agagatgaat gcaaattgta cattccatag
      361 ccaacctttt gatagcttaa tccaaagcct aaaacaaaaa caatttgatg ctgcaatttc
      421 aggtatgggt attacggaac cacgtaagaa acaagtatta tttagcgagc cttactttcc
      481 aagctctgct gccttcattg cgaaaaaaga tacagatttt gctaaggtga aaacgattgg
      541 tgtgcaaaat gggactactt accaacacta tttagcaaaa gagaaaaaag agtacaatgt
      601 gaaatcttat gcctcttatc aaaatgctat tttagatgtg caaaatgggc gaattgatgc
      661 tatttttggc gatgtgccgg tattggctga gatggcaaga aaacacgaag ggctagattt
      721 tgtaggggag aaaatcaata atccaaacta ttttggtgat ggtttaggca ttgcaactca
      781 cttgaaaaac caagtattag ttgatcaatt caatgcagca ttaaaaacga ttaaagagaa
      841 tggcgaatat caaaaaatct atgataaatg gatgggcggc aagtaacttg taagcggtca
      901 ttttttgcaa agttttgcaa agttttgcag attttgaccg cttgtattct ttgatttacc
      961 catttaagcc agtataagtt ttaagcataa gctccatggt ctgctttaaa ttagctagca
     1021 tttcataacg cttgcgatac attgagcgtt ttttgcttgg aatttcatct atttttttac
     1081 tttccaattc aaggggtaac tgccaataat ttcccggctt tccgcccgat tccgcaaaaa
     1141 tagcatcata atccactaca tagcgcttac tttgcaccca gcgggattta ttctggtatt
     1201 tctgtggaat gcctagtaaa ctctgatagc caagaacagc cgttaaagcc ttcatcgttt
     1261 caaccattaa ataggccggg cgtaagccgt ggcaactttt ggttaattgt ttcaccagct
     1321 cttttgaacc ttcaaaattc ggaccttgaa ttacggctat caacaaggct tcatctaact
     1381 taccaaatgt taataaataa actagctgat tagtcggtct gtggcgaagt tctaatgccc
     1441 aaaaaccttc catcggctga tgttcattga tgttaagcca taactcaaaa tctgcaataa
     1501 tttcaccaaa attgaccgct tgttcccata gaggtggtaa atgagccaat ttttgcggta
     1561 aaaacagcag gttatctgtg attttttgta agcgttgttt tgcactgaaa cgcttatcta
     1621 aaaagcggtg agccacgggg tagctgtaat ttggtcgagc atttaagagc ggaatcagtt
     1681 gtggattttg tgtaacgaac tgctcaaatt gcttgatttt ggaatgatgc aaccaagagc
     1741 gaagacggta acgaaaacgt ttccctgcgt aagacttctt tccctgattt ggataaagcg
     1801 attgtgcagc aggccatttg tatagatttt tcatttttac aactaacaat atgaaaagcg
     1861 gctaattcgc aagatttttc gctaaaataa ccgcttgtat aacttaaaac tacaaaataa
     1921 agcgacttaa atcttcgttt tccaccacgt catttaacgc ttcggaaaca tagttttcat
     1981 caatgatgat tttttcacca cggcgttcgc tggcatcgaa cgaaatgccg tccatcaaac
     2041 gctcaagcac ggtgtgtaaa cgtcttgccc cgatgttttc ggttttctcg ttcacacgga
     2101 atgcactttc tgcaatacgg ctgataccgt ctttagtgaa ctcaatctcc acgccttcag
     2161 ttttcatcaa ctcacgatat tgcaaggtta atgaggcatt cggttcggtt aaaatacgct
     2221 caaaatcttc tttggtaagc gattttaact ccacacgaat cggcaagcga ccctgtaatt
     2281 ctgggagtaa atcagacggg cgagccactt ggaatgcccc cgagcagata aacagaatat
     2341 ggtcggtttt caccatacca tgcttggtat ttaccgttga gccttcaatg attggaagta
     2401 aatcacgctg aacaccttca cgagaaacat ctccacccga atgctcgcct tttttacaga
     2461 ttttgtcgat ctcatcaata aagacaatac cgtgctgttc caccgcttca atcgcttgct
     2521 gtttcagctc ttcaggattt actaatttcg ccgcttcttc atcaagcatc acctttaacg
     2581 catctttgat tttcattttg cgttttttgg ttttgcttgg cgacattccc tcaaacagcg
     2641 attgtaattg cgaggtcatc tcttccattc ccggcggggt cataatctca acgctcactt
     2701 gagctgccac gtcaatttca atctctttat cgtctaattg cccttcacgc aattttttgc
     2761 ggaaagtttg gcgggtagaa ttattgtcgg attcctgcac atttccccac tgatctttcg
     2821 ccggtggcaa taatacgtct aaaatgcgat cttccgctgc atcttgtgca cgcattttat
     2881 ttttttcgac cgcttgttgg cggactaatt tcatcgacac atcagctaga tcacggataa
     2941 tcgaatccac ttctttaccc acatacccca cttcagtgaa tttggttgcc tcaactttga
     3001 taaaaggggc attggcaagc ttcgccaaac ggcgggcgat ttcggtttta cccacaccgg
     3061 tcggaccgat cattaaaata tttttggggg tcacttcttg gcggagatct tccggcaact
     3121 gcattcttct ccagcggtta cgcaaagcaa ttgctaccgc acgttttgca tctttttgtc
     3181 cgataatgtg tgcgtctaat tctgagacga tttcacgggg tgtcattgac ataatgttat
     3241 tccttaaatt aattaccctc tccccttgtg ggagagggac agatttttct ttgttcagaa
     3301 gaaaaatcag ggagagggta acaagcggtc ttttttctta aacgttttgc attaacccct
     3361 ctctctgaaa aatatttctg aacgaaatat ttttcggtct caatactcgc tacgctcgct
     3421 cctgtggagc cgttggcaaa gccaacgttc aaatgtaaac atttgtccca caaggggaga
     3481 gagttattta actaaacttc ttcaatcacg tgattgtagt tactgtaaat atcaatatcg
     3541 ccggcgattt ttaacgcttc cgcaacgatt tcttttgcag ataaattatt ttcggtgcgt
     3601 aataacgcaa gagcagcggc tttcgcatag ttaccgcctg aaccaatcgc cagcacatct
     3661 tgctccggct caatcacatc gcccgaacct gaaaccaata aaaactcgct gtcattggcg
     3721 acaatcatca tcgcttctaa acggcgtaaa gcacgctcgg tacgccactc ttttgccagt
     3781 tccactgccg atttcactaa atgcccttgg tgtaactcca attttttctc gaataaatca
     3841 cgcaaaataa aggcatcagc ggtcgagccg gcaaagcctg tcaccacttt gtctttatac
     3901 aaacggcgaa ctttccgcac cgtgcctttc tcgatacaat ttccaagcgt tgcctgacca
     3961 tcaccaccga tagccacttt tccgtcttta cgcacgcata caatcgttgt catactaaat
     4021 ccttcttttt aaaaactttg gcttatatgg ggatatgctg tgtgttttca agcttaaaac
     4081 tcacatttct ttgttaaggt tgccgcaata ggttgcccgt tttccaatga aattgccatt
     4141 ttataggaga gaacctgcac tttttgtgca atggcttgag cgaataattc ggcatatttg
     4201 gggtctatct gctttgccac ttcaaaccgt tcaatacctg tgtgcaaaat agcgaaaaaa
     4261 atgaccgctt gtaagccctg ttcagcgatt ttcgtcagct cccgcaaatg tttttgcccc
     4321 cgctcggttt tggcatcggg gaacattccc acaccgtttt cggttaaaag ggtggtagat
     4381 ttcacttcca caaaacaatc cggcagaagg tccgatttga gcaaaaaatc aatccgactg
     4441 ttttcactgc catatttttg ttcaggcaga atgtgctgat aatccgcaag ctcgctaatc
     4501 cattgatttt ccaaggcttc ttgtacaagc tgattggctc tcaaggtatt gacacaaata
     4561 aaatcccccg cttgggtttg ggttagttcc caagtgtgag catatttacg tttggggtta
     4621 tgagaggtgg aaaaccaaac tgtatcaccg gggttggcac agcctgtcat cgcaccggta
     4681 tttgggcaat ggagggtaat ttgttcgcca tttggcaact gaatatcggc aagaaaacgt
     4741 ttataacggc gaagtaaaat gccgtgggaa agagggggaa atttcatttg caaaaaatcc
     4801 tgttaaatta accgcttgta tcttttcatc atcggtagca aaacggagag taaggcggtg
     4861 caaataacaa taataatccc aacccaagtc actaaactga gctgttctga taaaaagacc
     4921 aatgccatta gcagtccgaa taccggttca agtgcgagta gaatacctgc aagaataggc
     4981 gaagattggc tgatgccttt gttccataac aatattgcca agctggtaca aataatgcct
     5041 aaatatgcta cgctcgccca tgctgagaga ctggttggca gttgccaatt ttctgcaaag
     5101 agtaaggtaa taggtaaggc ggtaattgcc ccttgcacca gcatgatctt ggttaaatcg
     5161 atcactttta ctgattgcag aatctctttg ctgaggtaca ttcccacaat aaaacttaaa
     5221 ctgcctaagg ttacaagcaa taatcctaat acattgattg aaccgctatc atcgctaccc
     5281 gatgccataa ttaaaatccc caagcaggca aataaactta ggataaaatc gagcctggtt
     5341 gcctgttttt tgaaacaaaa atagccgact aacacagtta aaagcgggtt tagcccgagt
     5401 agtgccacgg cacttgctgc ggaagttaat ttcaagccgg aaaattgtaa gatcacgtac
     5461 agaggaaaag tgagaaaact aatcagccag actttaatgt gctgattttt ctggattttt
     5521 ttatacgcag gaataaaaaa cggcagagcg ataaacgccg ctaacgtcag ccgaatttgc
     5581 ataatttgga cagggtcaaa ggctgaaatc gccactttac ctacaatgaa tgaactcgcc
     5641 caaatcaggg ttgcaatcag taaatataac atttagacct cgtaaaactc taacggcaga
     5701 tcgtccggat ctcggaaaaa cgtgaagcgt ttgccggtga tctcatcaat tcggatccct
     5761 tcatgcggta attgatgttg ttctaaaaat gcgatggcat attcaatatt ttccactcga
     5821 aatgccaaat ggcgaagccc gcaggtttcg ggcgaggtga aacgaggcgg cgtttcagga
     5881 aaactgaata attcaatttg tgagccatct ttaaagcgta aatctaattt atagctggca
     5941 cgttgctctc ggtaggtttc tgcgatgatc tctgccccta aaatgcgggt gtagaaatgt
     6001 ttggattttt cgtaatcgga aacaattaat gcaatgtggt ggaaacctaa aatgggcgat
     6061 ttcatctttt ttccttaatg tgtaaaattt ttggtaaaac tgaccgcttg cagtatgata
     6121 atttattttt cggatttcaa gatttttaat gaacagcaat tccccatttc ctttagcgaa
     6181 agcaaaagct tctgatccgt ttgccaaagc tgttttagct tggtttgagc aatatgggcg
     6241 gaaacattta ccttggcagc aaaataaaac gctgtatcag gtttggttgt cggaggtaat
     6301 gttgcaacaa actcaagtag cgaccgttat tccttatttt gcacgtttta tggaacgatt
     6361 tcccaccgta attgacttag ctaatgcctc gattgatgaa gtattgcatt tgtggacagg
     6421 gctgggttat tacgctcggg caagaaattt gcataaagcg gcaattcaaa ttcgagatga
     6481 gtttggcggt gaatttccta cccgatttga tgatgtgttg gcattaaccg gagtgggcag
     6541 aagtactgca ggggcgattt tgtcttctgt gttagatgcc ccacacccga ttttagatgg
     6601 caatgtcaaa cgggtgttaa gccgctattt tgcagtagaa ggctgggcgg gtgaaaaagc
     6661 ggtggaaaat cgcctttggc aattaagcga aagtgtgacg cctgataccc aagtggcaga
     6721 ctttaaccaa gcgatgatgg atttaggggc gatgatttgc acccgtacaa agcctaagtg
     6781 cttgctctgc ccgctacaag aaaattgtaa aacgaatgca atgcaagcgt gggatagctt
     6841 tcctgccaag aaaccgaaaa aaaccttgcc ggagcgtcaa acctattttt tagtgctgaa
     6901 aagcggctcg aaagtgctgt tacaaaaacg ggaagcaaaa ggcatttggg ggggcttatt
     6961 tgtgtttccg caatttgaga gcttagaggc tctcaagcgg tctgatttta tgcaaaattt
     7021 gcaaatttca cagcaattaa ctgcatttag gcatactttt agccattttc atttggatat
     7081 taccccggtt ttagtagaaa ccgatttgaa aaaaacaagt gaaaattcac cgcttgttgt
     7141 cgaagaaaaa gcaggaaatt atctttctaa ggtatcttca aatgcggatt attggtatga
     7201 tttgcaccaa cataacgaag tgggtttagc aacgccggtt aaacgtattt tagatgagct
     7261 ggcattcagt gtgaaaaatg agattaagga ttaaattatg gctcgtaccg tattttgcga
     7321 atatttaaaa caagaggcag aaggtttaga ttttcaactt tatccggggg agctgggtaa
     7381 gcgtattttt gactcaatca gcaagcaagc gtggtctgag tggattaaaa aacagacaat
     7441 gatcgtcaat gagaaaaaac tcagtatgat gaaccccgaa caccgtaaac tgctcgaaca
     7501 agagatggtc aattttttat ttgaaggtaa agagatcatc atcgaaggct ataagccggt
     7561 cgaataataa aggttaaatc acaatgaaaa aatatgctaa atatttgccg atgttggcaa
     7621 ttattccgtt tcttattgct tgtgggagca ataaatcgac taagaagcca aaatctaccc
     7681 gagtagatta ttctaaagat accaatggtt tggatatttt ggcagggcag ttttctcaca
     7741 atattgatga tatttgggga agtaacgagc tgttagttgc cagtaagaaa gattatgtga
     7801 aatatacgga taagttttac acccgtagcc atatttcgtt tgaagaaggg gtgattacga
     7861 ttgagacttt agggaatcag aatcatctac gcaattcgat tattcatact ttattaatgg
     7921 gcagagaccc gaaagggatt gatttatttg cctcaggcga tgcaccgatt agctctaacc
     7981 ctttcctaaa cggacaggtt gaagatcaat tcgggcgaaa tattaccaat gttgccatcg
     8041 ccaatgattt tgcgacttat ttgttgcaaa ataaggtgca aacacgccgt ttgaaaaatg
     8101 gtcaaactgt gagctttgta acgattaaaa tggtggcagg acacattgaa gtacgtgcca
     8161 gacaatattt accgctggtg cgtaaaatgg cgaagcagta tggtattgag ccaagtttga
     8221 ttttagggat tatggaagtc gaatcagcat tcaaccctta tgccatcagc tatgccaatg
     8281 cgattggctt aatgcaggtt gtacctcgta ccgccgggcg tgatattttt gcccgtaaag
     8341 gtatgggagg gcagccaagt cgtgaatatc tttataatcc atcaaataac attgatgcag
     8401 gtacgcttta tttgactatt ttgcgtgatg aatacttaga tggaattgaa gatcctgtgg
     8461 ctaaacgcta tgcaatgatt tctgcataca atagcggagc aggtgcggta ttacgagtgt
     8521 ttgattcaga ccgatactct gcgattgata gaattaacga tctttcgtct gatgcggttt
     8581 atcgaatttt aaccactgct catccatctt ctcaagctag aaattattta agaaaagtaa
     8641 ccaccgccag agagaaatat cgcaatattc gttaatgtgt gaattatgct gttttttagc
     8701 cgaaaagtat aaaaaaagca catttgagca gcggtttttt taaatttgca aaaaaacgtt
     8761 tgacgttgca agct
//
LOCUS       DANLTI010000110         8400 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.110, whole genome shotgun sequence.
ACCESSION   DANLTI010000110 DANLTI010000000
VERSION     DANLTI010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8400
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.110"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..849
                     /locus_tag="PXB09_002087"
     CDS             <1..849
                     /locus_tag="PXB09_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDL5234165.1"
                     /translation="NSLEKQIKNSQKIYQDKQSYLVEIEKSMNDYAELVKRYEKLLKV
                     GHSSHDEVNIQKSRYFQQKSLFNELKQELIQLKSTQLSLENEIETRKTEFNNQIIRYE
                     MQKSDLNIRLMEFESVSDIIVNASLDGKIESTSVTVGQIIKENDPLAQILPQNKGNYQ
                     LVMWVPNSAISFIKQGDEVNIRYEAFPFEKFGQFKGKITSISTLPASLQELSFYKNLP
                     VNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMKAEATLFLEKRKLYEWIFFPMYQL
                     RKNMEQ"
     gene            849..1640
                     /locus_tag="PXB09_002088"
     CDS             849..1640
                     /locus_tag="PXB09_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HDL5234166.1"
                     /translation="MTGIKQLKFDFRRRIPVILQTETAECGLACLAMMLGYYDKNTNL
                     FELRSQYGTSSRGVTLHTLISIANDCGLITRPLSLELDEVPQLRLPCILHWDFNHFVV
                     LTHASEKQFIIHDPAFGKRKLSRAEFSNHFTGVALEVWSEVKFEKSNNENTISLYETL
                     KHISGIKGALVKIFALSMLIELIALLMPIGTQLVMDHVMQAKDQSLLLIICIGLFLFT
                     LFRTMVSMFRAWVSLKMNYLIDFQWTASFFSHLLKLPLDFFENAK"
     gene            2018..2935
                     /locus_tag="PXB09_002089"
                     /pseudo
     CDS             2018..2935
                     /locus_tag="PXB09_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167835.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(2937..3605)
                     /locus_tag="PXB09_002090"
     CDS             complement(2937..3605)
                     /locus_tag="PXB09_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDL5234167.1"
                     /translation="MKYLYALIFSLFFSSVYAAERQLQCKVVGISDGDTLTCLVNKTP
                     LKIRLQHIDAPEQAQPYGNKAKQALAQFVFQQNITAIVSGYDRYQRLLATLYLNDKNI
                     NLALVENGMAWAYTTKREYIEAQDQAQQAKIGLWQDKFPINPSQWRKTHTSTLPQAVK
                     KPENIANQPPTIDCQIKLSCNQIGNYAQAKRYFQQCGWKELDGNNDSIPCNKLYRQEQ
                     KNRN"
     gene            complement(3649..5016)
                     /locus_tag="PXB09_002091"
     CDS             complement(3649..5016)
                     /locus_tag="PXB09_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDL5234168.1"
                     /translation="MSIDTILNQINSFVWGPPLLILISGVGLYLTFSLKGIQLSQLGQ
                     AFRYMFKPEKGKGQSGDISAFAALSTALAATIGTGNIVGVATAIHSGGPGALFWMWLI
                     ALFGMATKYAEGLLAIKYRTKDRAGFVAGGPMYYIELGMGKKWRWLAKAFAFFGVLVA
                     LLGIGTFPQVNGITHALESTFDVPIIFSAIILTLIVTAIILGGVQRISKIATIVVPFM
                     AIGYVIAALSVILLNMEKVPQAIITIVHAAFNPQAALGGAVGFTVMQAIQLGVARGIF
                     SNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIIVCTMTGLVIVISGAWAGDVK
                     GAELTTTAFTQGLNSSFGAIIVTVGLVFFAFTTILGWCYYGERCFVYLTRGRTQYIKL
                     YRLLFIALIASAPFLQLDTIWTLADIVNGLMAFPNLIALIALRKVIISETKDFFARLK
                     TGKAE"
     regulatory      complement(5135..5230)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(5401..6453)
                     /locus_tag="PXB09_002092"
     CDS             complement(5401..6453)
                     /locus_tag="PXB09_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5234169.1"
                     /translation="MTHSTKTLVAIASIIIILAGIKLSNEIVVPFLLSLFIAIICSPM
                     IKFMTKRKVPLWLAITILLIVFILGFSFLAGIINNTLQEFTNAIPQYKIQLSSRIQVI
                     LELAHRWHIPLTLSQEEIMSKFDPSSIMNLVSKLLMGLSGALSNIFVIFLVVIFMLLE
                     MPVAKYKLALALSPDDDLSNEKEYINQVLEGVIGYLGVKTFVSLLTGGLVWILLEILG
                     VEYAILWAILTFLLNYVPNIGSILAGIPIVIQALVLNGFSIGLGTLIGIVVINMVVGN
                     ALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKVALESNKATQKYA
                     VLFSDLEEVPKEQKYR"
     gene            complement(6500..6925)
                     /gene="ruvX"
                     /locus_tag="PXB09_002093"
     CDS             complement(6500..6925)
                     /gene="ruvX"
                     /locus_tag="PXB09_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDL5234170.1"
                     /translation="MTETTTKTVIAFDFGTNSIGCAVGQSITGTAQGLTTFKAQDGIP
                     NWEEIGKLLQDWKPDMLVVGLPLNMDGTEQPLTQRARKFANRLNGRFNLPVELQDERL
                     TTVEAKAEIFSRGGYKALKKDKVDSISACLILESWFENH"
     gene            complement(6925..7485)
                     /locus_tag="PXB09_002094"
     CDS             complement(6925..7485)
                     /locus_tag="PXB09_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDL5234171.1"
                     /translation="MLENLQGKFLIATPEMDDDYFERTVVYICEHNPQGAMGVVINTP
                     TDLSVLELITRMDFQMANQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITD
                     KITLTTSGDVLDSFGTLASPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTLFE
                     TGYLERWAEAYEMMGLSSIPSRAGRA"
     gene            complement(7485..8216)
                     /gene="rsmE"
                     /locus_tag="PXB09_002095"
     CDS             complement(7485..8216)
                     /gene="rsmE"
                     /locus_tag="PXB09_002095"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDL5234172.1"
                     /translation="MRIPRIYQPQPLAGLQSCVLSEDAANHVGRVLRMKQGEQIILFD
                     GSNHVFHATLQAVEKKQIIAKIDSSELDDRESNLPIHLGQVISRGDRMEFTIQKSVEL
                     GVKTITPLWSERCGVKLNDERQDKKLQQWQKIAIAACEQCGRNEIPEIRPIMKLTDWC
                     KEQDDMLKLNLHPRAKYTIRELPNVPKAGVRLLIGSEGGLSAEEIAMTESEGFTEVLL
                     GKRVLRTETASLAAITALQVCFGDI"
BASE COUNT         2531 a         1610 c         1665 g         2594 t
ORIGIN      
        1 aatagccttg aaaagcagat caaaaacagt caaaaaattt atcaagataa gcagagttat
       61 ttagtggaaa ttgaaaaaag tatgaatgac tatgcggagt tggttaaacg ctatgagaaa
      121 ttattaaaag tagggcattc cagccacgat gaagtgaata ttcagaaaag ccgttatttc
      181 caacaaaaat cactgtttaa tgagctaaag caagaattaa ttcaattaaa atccacccaa
      241 cttagcttgg aaaatgaaat tgaaacccgt aaaaccgaat ttaataatca gattattcgc
      301 tatgaaatgc aaaaaagcga tttaaacatt cgtttaatgg aatttgaatc tgtttcagat
      361 attattgtta atgcctcttt agatggaaaa attgaaagta ccagcgtaac agttgggcaa
      421 attattaaag aaaatgaccc gcttgcacaa attctgccac agaataaagg aaattatcag
      481 ctagtgatgt gggtaccgaa tagtgccatt tcatttatta aacaaggcga tgaggtgaat
      541 attcgctatg aggcttttcc gtttgaaaaa ttcgggcagt ttaagggcaa aattacgtca
      601 atttcaacct taccagcttc tttgcaagaa cttagttttt ataaaaatct ccctgtaaat
      661 ttagagcaag gtattccgct ttataaaatt ctgattgagc ttgccgatca aaacgtaaaa
      721 tataatgata cctcccttta ttttatgagt ggaatgaaag ccgaagccac gttattttta
      781 gaaaaacgta aactgtatga gtggatattt ttccctatgt atcaattacg caaaaatatg
      841 gagcaataat gacaggaatt aagcagttaa aatttgattt tcggagaaga atacctgtta
      901 ttttgcaaac tgaaacagct gaatgtggct tagcctgttt agcgatgatg ttgggctatt
      961 acgataaaaa caccaattta tttgaattgc gaagtcaata tggtacttcc tctcgtggcg
     1021 taacgctgca tactttaatt tctattgcaa atgactgtgg tttaataact cgccctcttt
     1081 ctctagagtt agatgaagta ccacaacttc gtctgccttg tattcttcat tgggatttta
     1141 atcattttgt agtattaact cacgcaagtg aaaaacagtt tattatccac gatcctgctt
     1201 tcggtaaacg taaattatcc cgtgctgaat tttccaacca ttttaccgga gtcgctttag
     1261 aagtttggtc tgaagttaaa tttgagaaaa gcaacaatga aaataccatt agtttgtatg
     1321 aaaccttaaa gcatatttct ggcataaaag gtgcattagt gaaaattttt gccctttcaa
     1381 tgctcattga actcattgcc ttattgatgc caattggaac acagttagtg atggatcacg
     1441 ttatgcaagc gaaagatcaa tcattacttt taattatctg tattgggcta tttttattta
     1501 ccctttttcg cacaatggtc agtatgttta gggcttgggt ttccttgaaa atgaattatt
     1561 taattgattt tcaatggaca gccagtttct tttctcatct cttaaaatta ccgcttgatt
     1621 tctttgaaaa cgccaagtag gtgatattca ttcccgattt agttcattaa aaaccattca
     1681 gaaaactcta acttcaagca ttattaccac gattattgat acgattatga taatcagttt
     1741 aattattatg atggtgttat atggcggttg gctcttttgg gtagtattag ctttttcctt
     1801 tatctatttt attcttcgaa tggttactta tttagtttat cgtcaactga atgaagagca
     1861 gattattaaa ggagcaaaag cccattcgca ttttatggaa actttatatg gtattacaac
     1921 gttaaaatca ttaggattgg aaaataaacg acaagaacag tggatgtcgc tcaatgcgga
     1981 tgcttttaac acatcaatta aggtaactaa atttgatatg ctgttttccg gtattcatac
     2041 ctttatttct accatcgaac agattttaat tctttggatt ggggcgacaa tgatgattga
     2101 aaatgtgatg acattaggaa tgtttgtcgc ttttaatgcc tatcgaggct ctttctcttc
     2161 acgaatgggg aatttaattg atattatttt tagcctaaaa attctttcat tacatagaga
     2221 gcggattgca gacattgctt taaatgaagt cgaagatgaa agtaaatatc aagaactcag
     2281 atttgaacat aaccaaacag atatagaagt taaagacctt tgtttcaaat acgatccttt
     2341 ttctaaaaat gtgcttgaaa atgtcaattt agtgatcaga agtggggaaa gtgttgctat
     2401 taccgcacca tcaggttatg gcaaaacaac gttattaaaa ttaattgcag gtttattaaa
     2461 accaacctca ggttctgtgt attttaacgg cattgatatt tatcagttag gattaagtca
     2521 atatcggagc caaattgctt gcgtattaca ggaagataaa ttcttttctg gttccatttt
     2581 agagaatatt gttagttttg aaagtaatta tgatcgagaa tgggctatcg aatgtagcaa
     2641 acttgcgaat attcacaatg atattatggc aatgccgatg aattatgaaa ccttattagg
     2701 agaattagga aataatttgt ctggcggaca aagataacga ttgtttattg ctcgagcttt
     2761 atataaaaag cctaaaattc ttttgatgga tgaggcgact agccatttag atgaagaaaa
     2821 tgagaagctt gtcaatcaag ctatttcacg aatgaagata acaaggatta ttattgctca
     2881 tagacaatcg actattcagt cggcggatag aattattgcc ctgaatgaca ggtaaattaa
     2941 ttcctatttt tctgttcttg ccgataaagt ttattgcacg gaatgctgtc gttgttgccg
     3001 tctagctctt tccagccgca ttgttgaaag tagcgttttg cctgtgcgta attgccgatt
     3061 tggttgcagc ttaatttaat ttggcaatca atcgttggtg gctggtttgc aatattttcc
     3121 ggttttttga ccgcttgtgg taaggttgag gtgtgtgttt ttcgccattg gctcgggtta
     3181 atcgggaatt tgtcctgcca taagccgatt ttagcttgct gtgcttgatc ttgtgcttcg
     3241 atatattccc gctttgtggt gtaagcccac gccataccgt tttccactaa ggctaagttg
     3301 atgtttttat cgtttaagta gagggtggca agtaatcgtt ggtaacgatc atagcctgaa
     3361 actatggcag taatgttttg ttgaaacacg aattgagcca gagcttgttt ggctttgttg
     3421 ccgtaaggct gcgcttgttc gggggcatca atatgttgta gccttatttt tagtggtgtt
     3481 ttattgacca aacaagtgag ggtgtcgcca tcgctaatgc caacgacttt gcattgtagt
     3541 tggcgttcgg cggcatatac cgatgagaaa aataagctaa aaatcagggc gtaaagatat
     3601 ttcattatta aaaaagagag ggctaataag ccctcattct atcatttttt attcggcttt
     3661 acctgtttta aggcgagcga agaaatcttt tgtttcacta ataatcactt tgcgtaacgc
     3721 aatcaatgcg attaaattcg ggaatgccat taagccgttc acgatgtctg ccagcgtcca
     3781 aattgtatcg agttgtaaaa atggagcaga ggcgatgagt gcaataaaca gcaagcggta
     3841 taatttaatg tattgggtgc gacctcgagt gagatagaca aaacagcgtt caccgtagta
     3901 gcaccagcct aaaatggtgg taaaggcaaa gaagactaaa ccaactgtca caattatcgc
     3961 accgaatgag ctgtttaaac cttgagtaaa agcggttgtg gtgagttctg cgccttttac
     4021 atcgcctgcc caagcccctg aaatcacaat tactaagccg gtcattgtgc agacgataat
     4081 agtgtctaag aacgtgccgg tcattgaaat taggccttga cgtaccggct ctttggtttg
     4141 ggcggcagcg gcggcgatgg gggcagagcc taatcctgat tcattcgaga aaataccacg
     4201 tgcaacccct aattgaatcg cttgcatgac ggtgaatccg actgctccgc ctaatgccgc
     4261 ttgtgggttg aaagctgcgt gtacaatagt aataattgct tgtgggactt tttccatatt
     4321 cagtagaatg acggataaag cggcgatgac atacccaata gccataaacg gtacaacaat
     4381 ggttgcaatt ttagaaatcc gctgcacgcc acctaaaata atagcggtaa cgataagggt
     4441 taaaatgatc gcactgaaga taatcggcac atcaaaggtg ctttctaagg cgtgggtaat
     4501 gccattcact tgggggaacg tgccaatacc aagcaaagcg accaatacgc caaaaaacgc
     4561 aaaggcttta gcaagccaac gccatttttt tcccattccc agttcgatat agtacatcgg
     4621 accaccagcc acaaatccgg ctctatcttt agttcgatat ttaattgcca ataagccttc
     4681 ggcatatttc gtagccatac cgaataaggc aatcagccac atccaaaata atgctccagg
     4741 cccgcccgaa tgaatagcgg ttgccacgcc gacaatattc cccgtgccga tagtagctgc
     4801 tagggcagtg gaaagggctg caaaagcgga aatatcgccc gattgccctt tgcctttttc
     4861 cggtttgaac atatagcgaa aggcttgccc tagttggctt aattgaatac ctttgagtga
     4921 aaaggttaaa tataacccta cgcctgaaat taaaatcagg agtggcgggc cccaaacaaa
     4981 actgttgatt tgattaagaa tagtgtcgat agacatttga tgttcctcgt aaaaactgct
     5041 tacaaggaaa gaaaaggaat gcaagagaca agcggtcaaa aaacggaaat tttttgcaaa
     5101 gaattagcaa aaaaacaccg cttgtatcgt ataacttttc tcccctgtcc ttttgcctga
     5161 gcgtttcaca cattgctgta ttttcgcctt cggcggcgga ttttaatccg ctctctccaa
     5221 gggttcgtcc agtaacagtc cccgcagtgt tcactgcacc tgaaagagtt tacctcgtcg
     5281 gtgaaatgtt aattcatttc tctccagcta ccttcatccg aacaatctaa tttattttat
     5341 aatgtaaaat aaaaaagatt tgccaaattc tagcaactct tttgcttccg tcaagtgaat
     5401 ttaacgatat ttttgttctt tcggtacttc ttctaaatcg ctaaataata cggcatattt
     5461 ttgggtggct ttattggatt ctaatgccac tttacacgcc atcgtaagtg gaacagaaag
     5521 taacattcct acggtgccaa gtaaccaccc ccaaaataga agtgagagga acactacaag
     5581 ggtagaaagc ccgagtttct tgcccattaa tttaggttca agcgcattac ccacaaccat
     5641 attaatcacg acaatgccga ttaaagtgcc taatcctata gaaaagccat tgagtaccaa
     5701 ggcttgaatc acaattggaa ttcccgccaa aatagagccg atattcggga cgtagttaag
     5761 caggaaggtt agaattgccc ataaaatcgc atattctacg cctagaattt ctagtaagat
     5821 ccaaactaac cctccggtga gtaggctcac aaaggtttta actccaaggt aaccaatcac
     5881 cccttcaagt acttggttga tatactcttt ttcgttgctt aaatcatcat ctgggctaag
     5941 tgcgagggct aatttatatt tggcaaccgg catttccaat agcataaaaa tgacgactaa
     6001 gaaaatcaca aaaatattcg ataatgcacc ggatagcccc attagcagtt tgctgaccaa
     6061 attcattatt gagcttgggt caaatttgct cataatctct tcttgtgaga gggtaagtgg
     6121 aatatgccat ctatgggcga gttctagaat cacctggatt ctagatgaaa gctgaatttt
     6181 gtattgcgga atagcattag taaattcttg caaggtgtta ttaataatgc ctgctaagaa
     6241 actgaatcct aagataaaaa caataagtaa aatggtaatg gctaaccata atggcacttt
     6301 acgcttagtc ataaatttga tcattggtga acaaataatg gcaataaata gcgaaagtaa
     6361 aaatggcaca acaatttcat tggataattt aatccctgcc agaataatga taatggaggc
     6421 tatcgccacg agagttttgg tggaatgtgt cataattttt ccttttacaa gcggttaaaa
     6481 atcagcaatt ttttacaaat tagtgattct caaaccaact ttctaaaatt aaacaagcgg
     6541 aaatggaatc cactttatcc ttttttaatg ctttgtaacc accacgagaa aaaatttccg
     6601 cttttgcttc aacagtagtg aggcgttcat cttgtagctc aaccggcaga ttaaagcgtc
     6661 cgtttaagcg attggcaaat tttctggcac gctgagttaa aggctgctct gtgccgtcca
     6721 tattcaaggg tagcccaaca accagcatat ctggtttcca atcttgcaag agttttccga
     6781 tctcttccca gtttggaata ccgtcttggg ctttaaatgt agttaaacct tgagctgtgc
     6841 cggtaatact ttgtccaact gcacagccga tgctatttgt gccaaaatca aaggcaatca
     6901 cggtttttgt tgtggtttct gtcattaagc tctcccagct cttgacggta tgcttgaaag
     6961 ccccatcatt tcataggctt ctgcccaacg ctctaaataa ccggtttcaa acagcgtttt
     7021 ttcattcgca tcagacacaa tccaataatt ttgagcaatt tcttgctcaa gctggctgcc
     7081 acgccaagtg gaacaaccta aacacacaat aaatttttca ggtgaagcca gtgtgccaaa
     7141 ggagtctaac acatcaccgg aggtagtgag cgtaatttta tcggtgatcg gataagtgtg
     7201 aataaaatca ttggcggttt tggtgtgaat aataaagcca cgatcttgat ttaccggccc
     7261 accgcttaac accatttggt cttttttgta atcacgctgg ttcgccattt ggaaatccat
     7321 tcgggtaatc agctctagaa ccgacagatc ggtaggagtg ttaattacta ctcccattgc
     7381 accttgcgga ttatgttcgc aaatatagac caccgtacgc tcgaaatagt catcgtccat
     7441 ttccggcgtg gcaattaaaa atttaccttg taaattctct aacattaaat atctccaaaa
     7501 caaacttgta acgcagtaat tgccgcaagt gaggcggttt ctgtgcgtaa cactcgttta
     7561 cccagtaata cttcagtaaa accttcgctc tcggtcatgg cgatttcttc ggcagataat
     7621 ccgccctcag agccaatcag taaacgaaca ccagctttcg gcacattcgg cagttcacga
     7681 atggtatatt tggctcttgg gtgcaaattc agtttcaaca tatcgtcttg ttctttgcac
     7741 cagtcggtga gtttcataat cgggcgaatt tcagggattt catttcgtcc gcattgttca
     7801 caggcggcaa tcgcaatttt ctgccattgc tgtaattttt tatcttgccg ttcatcattg
     7861 agtttcacgc cacaacgttc cgaccaaagt ggggtaatag tttttacccc cagctccacc
     7921 gatttttgaa tggtaaattc cattctatcg cctcgggaaa tcacttgccc taaatggatc
     7981 ggcaggttgg attctcggtc atctaattca cttgaatcaa tttttgcaat aatttgcttt
     8041 ttttcgaccg cttgtaacgt agcgtggaaa acgtggtttg aaccatcaaa taaaatgatt
     8101 tgctctcctt gtttcattcg tagcactcgc ccaacgtggt tagcggcatc ttcacttaac
     8161 acgcaacttt gaagaccagc taacggctgt ggttggtaaa ttcttgggat tctcataatt
     8221 atctagttat aaattaaagg cagacgattg tctgccatag gtaagttaaa acgggttaag
     8281 gataaagtct tgaacaatgc acaatagtaa taatcgaaat ttcattctct ttaacttcac
     8341 acactattct atagccgtta tgatatagtt ctctcgtatt aataattgca ccttttacac
//
LOCUS       DANLTI010000111         8393 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.111, whole genome shotgun sequence.
ACCESSION   DANLTI010000111 DANLTI010000000
VERSION     DANLTI010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8393
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.111"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            238..323
                     /locus_tag="PXB09_002096"
     tRNA            238..323
                     /locus_tag="PXB09_002096"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:272..274,aa:Leu,seq:caa)
     gene            421..1245
                     /locus_tag="PXB09_002097"
     CDS             421..1245
                     /locus_tag="PXB09_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDL5234173.1"
                     /translation="MKPLQNGTNKPFTITIASTKGGSAKSTNAANIGAFCAEHGLRTL
                     LIDTDTQPTLSSYYELEYQAPGGTYEFLHFKDVDPTHIISRTTIPNLDLIQSNDPSNK
                     ISPMLRDSPDGALRFSLLLQKIEGYDVIIIDTRGTRDITVDMSVLAADVLFCPILPHI
                     LSAKEFIRGTIGMYQDLETFTAFGFTLPPLKAMINCVDHTKDVKLVSDYLHTLFQNEF
                     DENKTLLEFSVPDRVAYREAATFSKPVYRQSQAEYETISQLCALLMPQFANSHFSA"
     gene            1257..2618
                     /gene="dnaB"
                     /locus_tag="PXB09_002098"
     CDS             1257..2618
                     /gene="dnaB"
                     /locus_tag="PXB09_002098"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5234174.1"
                     /translation="MSSLNKSLVQPHSIEAEFSVIGGLLLDNELFDEVSSKINEGDFY
                     NFTHRLLFKHISELIEAGKPADILTLDQYLTQKKVIEDLGGFAYLAEIVKNTPSTANI
                     HAYTDIVLLYSKQRQLLKLGQFIVDQTQSAKTPDKFEAVVDDIEKKITEFSLSDNTKS
                     AADLSDIFANMLSRMELSAKNGDPVTGTPTGIQGIDEATTGGQPGDLIVIGARPSMGK
                     TAFSQTIAYHTLKKFESAPVFYHSMEMPADQILQRFLAMRARVGLQNIRQADSLDDEE
                     WSKLTSAMGYILEHWKNRLVIDDEGSLTPQKLRTKVRQNARKYGKPAAIFIDYIQLMQ
                     TSQRYENRNLEIANISRSLKLLAKEMDCPVYALSQLNRSVEQRANKRPINSDLRESGS
                     LEQDADVILFIYRDEVYDADSPFKGTAEIIIGKQRNGPLTSVMTNFRSEFALFENRTN
                     TTH"
     gene            2627..4273
                     /locus_tag="PXB09_002099"
     CDS             2627..4273
                     /locus_tag="PXB09_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5234175.1"
                     /translation="MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDVEYITV
                     TLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQ
                     ALKELFTETKDPKFWSISCQYKPWQGDTADSVEAELNLLIGHLIENDTRADLSFIEKA
                     LGILQAKEYYEKKLGKSLSSRELSSELENDGYIISHALILKMERCVNYLYPHIPEVLF
                     SGLGHTQIDKLLAIRNNAEEVWAAHQFDTDVTFESLWSENLSKFNEATPFQAKEFQSE
                     LITAMVEALEGKVSFETLYLDIDLDEQKFKKIAAKQQEIDNLVEKTVDQINTRQEQQT
                     AKSEPLIKNENKAVTPQKAQHIIDEVIDDNESDDEQNNAITDLSQLGSSLLDNQDNQE
                     DYLSQIAHNFGLTPGMSIQEQREQRAEANGLTFACEGRQPVEDIWLIHPARQYRSEAY
                     SLALDIAESMGIDHLVEHIVKQPVDYTYAMKPADTELSPSALTLYSFLSMLQTAEHKD
                     ENSCVLDSKFLFELDDLTLVKIFRLIRVSRHIRQQGGEND"
     gene            4266..4823
                     /locus_tag="PXB09_002100"
     CDS             4266..4823
                     /locus_tag="PXB09_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HDL5234176.1"
                     /translation="MIKPITVNEALIGNALLNIKEGNIHPCLKMGFSEEQLKAINNLS
                     IDEIMDISNSVVSFAKVEINHETFWKLLAIAQANTQQRQIIDRALLLGASIEMLHQYF
                     GLSTSEVSARRQLLGIEEKMGRKAAASDEESTHIWEIWQRYKQRMEILDSQEGLELLC
                     LIAEEGNMNLTVVWKLVSEWYSKHK"
     gene            4982..6172
                     /locus_tag="PXB09_002101"
     CDS             4982..6172
                     /locus_tag="PXB09_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234177.1"
                     /translation="MFSSTNKPTEHGLLFFGNQHETVPTRLLQDPCLTPRAKFAWQLI
                     KCNVQAFQGGLFPSYETLSKMLSDRPYAEAKLSEKVVTQTLYLLRLTRWLTLCETVRD
                     ERGYVQGNVYILHDEPVPILDAIQLNSDYLSFLDKCTKHKDSLINGVANHIVESLITD
                     KTKWHYVSHLDCLQSRYQIYQQQQLVKDKQPSQTEQELSKIQQNILTSTMEVRDFDEE
                     VRKKSSKNQTSNKGVRAKNEDKSLILDLLPLGKSDVQYRTLYINKYCTGEPSEITWPQ
                     EIPLTSLEQKLTAQAMKGLDLGLCQAILLEVQQRIIQKQDVKKPKGYLYTLIQRAKQG
                     EFKPYYFELGKNLPSQNQANNNSAHSIQKLTEQPTEKPVLTSADREQMASRMQKFRAE
                     LLLQ"
     gene            6351..7109
                     /locus_tag="PXB09_002102"
     CDS             6351..7109
                     /locus_tag="PXB09_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HDL5234178.1"
                     /translation="MTTQLDPQLGPLRSEITFTLHTQYAHKLWVGRPMIRNEEGKVTQ
                     SSIISVPNCFAMLTQIQRAASEDDPYADDYLIQFEESVINYRKEIQKLTNDIVTLYAK
                     MLPEGISIERCANISPISYPIYVNSQLGYQLLYLLGDFDSLCRSVMTAAHIAIINRAE
                     AQDWIEAGARLIRKCFGIVERYKSSGITRRDYQEKNARYQAAIKRMGYTLSDAVLTGE
                     HRAEFAPFIKQNTTVEEEQSVETHITAQTNESQK"
     gene            7118..7603
                     /locus_tag="PXB09_002103"
     CDS             7118..7603
                     /locus_tag="PXB09_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3158 family protein"
                     /protein_id="HDL5234179.1"
                     /translation="MNLISDEIYRQLVKDSGLNTSLKQLFSHFDTGSDYELLQEQFTQ
                     ARAYFMAAQDSMVQSVRQDLSPLAVYMIKDKASSSGGTFLRWRSMQNARTGGTVWQPI
                     VDDKSVPVEVRKKVVAVEKDRILINMQISVFNHILRQLADCAEKLKEVDNAVAKSDLN
                     S"
     gene            7959..>8393
                     /gene="ssb"
                     /locus_tag="PXB09_002104"
     CDS             7959..>8393
                     /gene="ssb"
                     /locus_tag="PXB09_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5234180.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GERREVTEWHRIVFYRRYAEICGQYLRKGSKIYIEGKLRTRKWQDQNGQERYTTEIQG
                     ELLQMLDSRNATNSVDGQQSNYQAMSQSPKATHPQDLPMDNFD"
BASE COUNT         2740 a         1626 c         1680 g         2347 t
ORIGIN      
        1 ttgttcactt agttatccac aggtgatgtg cataactatt tttgtaaaga tgaattgagt
       61 gctgattttt aaatcaaccg atttcaaaag gcatttttac gcttgcacaa gcggtcatat
      121 ttccctataa tcgtgcaaaa attaagccag tgtggcgaaa tcggtagacg cagcggattc
      181 aaaatcttat gcgtaaactg ataggacata caggcgattg aataaaaagc actcttagcc
      241 tgagtgatga aattggtaga catgacggat tcaaaatccg ttggtgaata accgtgtcgg
      301 ttcgagtccg acctcaggca ccatttgaat cacacttgta gtttctctct ttcaaataat
      361 caattcaaat acaccgtatt aatggccaat actccttaac ccttgttaag agagtaaatt
      421 atgaaaccat tacaaaacgg tacaaacaaa ccttttacca ttactattgc ttcaactaaa
      481 ggtggctctg ccaagagtac gaatgctgct aacattggtg cattctgtgc agaacacggt
      541 ctaagaaccc ttcttattga taccgatacc caacccacat taagctctta ttatgagttg
      601 gaatatcaag ctcccggtgg aacttacgaa tttctgcatt ttaaagatgt agatcctacc
      661 cacattattt ctagaacgac tatcccaaat cttgacttga tccagtctaa tgacccgtca
      721 aataaaatca gcccaatgct gagagattca cctgacggtg cattacgttt tagtttactg
      781 ctccagaaaa ttgaaggtta cgatgtcatc attattgaca ctcgtggtac cagagatatt
      841 actgtcgata tgtctgtatt ggcagcagat gttttattct gtcctattct tccccacatt
      901 ttatctgcta aggagtttat tcgtggcacg attggaatgt atcaagacct cgaaaccttt
      961 acggcatttg gctttaccct accaccgctg aaagcgatga ttaactgtgt tgatcacact
     1021 aaagatgtca aattggtttc cgactacctt catactctct tccaaaatga gtttgatgaa
     1081 aacaaaacat tgctggaatt ttcggtacct gaccgcgtgg catatcgtga agcggcaact
     1141 ttttcaaaac cggtctatcg tcagagccaa gctgaatatg aaacgatcag tcagctttgt
     1201 gcgttactga tgccacagtt tgcaaactct cacttctcag catagaggga gaatgtatgt
     1261 ctagcttaaa taaatcactt gtacagccgc attctataga ggctgaattt tcagtaatcg
     1321 gtggattact cttggataat gaactctttg atgaagtgag tagcaaaatc aatgaggggg
     1381 atttttataa ttttactcac cgtctactgt ttaagcatat ttccgaattg attgaagccg
     1441 gtaaaccagc agatatattg acattggatc aataccttac ccagaaaaaa gtgatcgagg
     1501 atttgggcgg atttgcttat cttgcagaaa tagtcaaaaa cactccatct acagctaata
     1561 tccacgctta tacggatatc gttctcttat atagtaaaca gcgacagctt ttaaaactgg
     1621 ggcagtttat tgttgatcag acacagagtg cgaaaacgcc agataagttt gaagctgttg
     1681 ttgatgacat tgagaaaaaa attactgagt ttagcctatc agataataca aaatctgcag
     1741 cagatttaag tgatattttt gccaatatgc tctctcgtat ggaactctcg gctaaaaatg
     1801 gagatcctgt gacaggtact ccaactggta ttcaaggtat tgacgaagcg acaacaggtg
     1861 gacagccagg cgatttaatc gtgattggtg cccgcccttc tatgggaaaa accgcatttt
     1921 ctcaaactat cgcttaccat acacttaaaa aattcgagtc ggctcctgtg ttctatcaca
     1981 gcatggaaat gccggcagat cagattttac aacgttttct agctatgcgt gccagagtgg
     2041 gattgcaaaa tattagacag gcagacagtt tggatgatga ggaatggtca aaactaacct
     2101 cagcaatggg ctatatccta gaacattgga aaaatcgttt agttattgat gatgaaggta
     2161 gtctcacgcc tcaaaaatta cgcactaaag ttcgacaaaa tgctcgtaaa tatggcaaac
     2221 cggcagctat tttcattgat tacattcagt taatgcaaac ctcgcaacgt tatgaaaatc
     2281 gcaatttaga aattgccaac atctctcgtt cactcaaatt actggcaaaa gagatggatt
     2341 gtccggttta tgccctctct cagctgaacc ggtctgtgga acaacgtgcc aataaacgcc
     2401 cgatcaactc tgatttacgg gaatccggct cacttgagca agatgccgat gtcattttat
     2461 tcatctaccg agatgaagtt tatgatgcgg attctccgtt taaaggcact gctgaaatca
     2521 ttatcggcaa gcaaagaaac ggaccactta cttccgtaat gacgaatttc agaagtgaat
     2581 ttgccctatt tgaaaacaga acaaacacaa cgcattagga tagattatga caaaagatga
     2641 aaaaagactg gcagcgatag caaaaggatt aaatgtttca cctatttcaa atacggctcc
     2701 atcctaccaa acagccacac caacgcatta cagtagcgat gttgaatata ttacagtaac
     2761 gctggataag ttgcgtccgt atgagcataa ccctcggaaa acccgtaacc ctaactttga
     2821 gatgatcaaa gagtctattc gtcgtcgagg gttagatcat aagccgaata tcacccgtcg
     2881 tccgggagaa gatttctata ttatcgctga cggtggtaat actcgtattc aggcactcaa
     2941 ggagctcttt accgagacca aagatccaaa attttggtcc atcagttgtc aatataaacc
     3001 ttggcaaggt gatactgccg acagtgtcga agctgaactc aatttactta tcgggcattt
     3061 gattgaaaat gatacccgtg cggatttgtc atttattgaa aaagcattgg ggattttgca
     3121 ggcgaaggag tattacgaga aaaaattagg taagtctctt tcttcgagag agttatcttc
     3181 tgagttagaa aatgatggat atattatctc tcatgctctc attcttaaaa tggaacgttg
     3241 tgttaattac ttatatccac atataccaga agttcttttt agtggtcttg gtcatacaca
     3301 gatcgataaa ctattagcta ttcgtaataa tgctgaagag gtatgggcag cccatcaatt
     3361 tgatactgat gttacttttg aatcgctctg gtcagaaaat ttatccaaat ttaatgaggc
     3421 tacaccattt caagcaaaag aattccaaag tgaattgatt acggcaatgg ttgaagcttt
     3481 agagggtaaa gtgagttttg aaacacttta tctggatatt gacttagatg aacaaaaatt
     3541 caaaaaaata gcggctaaac aacaagaaat tgataattta gttgaaaaaa cagtcgatca
     3601 aatcaatacc agacaggaac aacaaactgc aaaatctgaa cctctcatca aaaatgaaaa
     3661 taaagccgtt actccccaaa aagctcaaca tattattgat gaggtaattg atgataacga
     3721 aagtgatgat gagcagaata acgctattac tgatttatct cagcttggct cttcattgct
     3781 cgataaccaa gataatcaag aagattatct atcccaaatt gcccataact ttggactcac
     3841 tccgggaatg agtattcaag aacagcgaga gcaacgagct gaagcgaatg gactgacttt
     3901 tgcttgtgaa ggtcgccaac cggttgaaga tatttggttg attcaccccg cacgtcaata
     3961 tcgctcagag gcctactcac tggccttaga tattgccgaa agtatgggca ttgaccatct
     4021 ggttgaacat attgtgaaac aaccagtgga ttacacttat gcaatgaaac cggcagatac
     4081 tgaactttca ccgtctgctt taacactcta ctcattcctc tcaatgttac agactgctga
     4141 acataaagat gaaaatagct gtgtcttaga ttccaaattc ctgtttgagc ttgatgatct
     4201 taccttagtc aaaattttcc gtctcattcg ggtcagtcgc catattcgcc aacaaggagg
     4261 agaaaatgat taagccgatt accgtaaatg aagcattgat tggtaacgcc ctgctcaata
     4321 ttaaagaggg aaatatccat ccttgtctaa aaatgggatt ttctgaggag caactaaaag
     4381 cgatcaataa tctcagtatt gatgaaatta tggatattag caactccgtt gtctcttttg
     4441 ctaaggtgga gattaatcac gaaacctttt ggaaattact ggctattgca caagccaata
     4501 ctcaacagcg acaaattatt gaccgagcat tattgctcgg agcctctatt gaaatgttgc
     4561 accagtattt tggtttatca acctctgaag tctcggctcg ccgtcaatta ctcggtatcg
     4621 aagaaaaaat gggacgaaaa gcggcagcaa gtgatgaaga atctacccat atttgggaaa
     4681 tttggcaaag atacaaacaa cgaatggaaa tcctagattc acaagaagga ttagagcttc
     4741 tatgtctgat tgctgaggaa ggcaatatga atctaacggt tgtttggaaa ctggtttccg
     4801 aatggtattc aaaacataag taaaaaataa atgccccgaa gttggagctt tggggcattc
     4861 gatattgagt cttgtatctc tatcttatga attacaagga ctttgcagaa gtcccgtgca
     4921 ttatagccat aggagagaga atagcaagag aaaaactctt ttatcctggt ggagagaaac
     4981 aatgtttagc agcacgaata agccaacaga gcatggattg ctattttttg gcaaccaaca
     5041 cgaaacagtc cctactcgat tattacaaga tccctgcctt acaccaagag caaagtttgc
     5101 ttggcagctc attaagtgca atgttcaagc ctttcaagga ggattatttc cctcttatga
     5161 gacgctcagc aaaatgttat ccgatagacc ttatgcggag gctaaattat cggaaaaagt
     5221 cgtgactcaa acactctatt tactccgtct tactcgctgg cttactttat gtgaaacagt
     5281 gcgtgatgag cgaggttatg tacaaggtaa tgtttatatc ctacatgatg aacctgtgcc
     5341 aattttagat gcaattcaat taaatagcga ctatctctct tttttagata aatgcaccaa
     5401 acataaagat agccttatta atggtgtggc aaatcatatt gttgaaagtc taataacaga
     5461 caaaaccaaa tggcactatg tctctcattt agactgttta caaagtcgtt atcagatata
     5521 ccagcaacag cagctggtga aagataaaca gccatcgcaa acagaacaag aattaagcaa
     5581 aattcaacaa aacatcctaa cttccactat ggaagttagg gattttgatg aggaagtcag
     5641 gaaaaaatcc tctaaaaacc agacttccaa taagggagtt agggctaaaa atgaagataa
     5701 gtcattgatt ttagacttac ttccattagg gaagtcagat gtacagtacc gtactttata
     5761 tattaataag tactgtactg gggaaccgag cgaaattact tggccacaag aaatcccatt
     5821 aacttcactt gaacaaaaac ttactgcaca ggcaatgaag ggattagacc tcggtttatg
     5881 ccaagctatt ttgttggaag tacaacaacg cattattcaa aagcaggatg tgaaaaaacc
     5941 gaaaggttat ctctatacgc ttatccagcg ggcgaagcag ggtgaattta aaccctacta
     6001 ttttgaatta ggaaaaaatc ttccctcaca gaatcaggct aacaataatt ctgctcattc
     6061 tatacaaaaa ctgactgagc agcctactga gaaaccggtc ttaacttcag cagacagaga
     6121 gcaaatggct agtcgtatgc agaagtttag agctgaatta cttttacaat aagattaaaa
     6181 aacaatcact gttaaggggc ttaatagtga gtgaaaaata atcagtgtgt accaggtaca
     6241 caatggataa aaaataaaca gcgtaggcag tgtctgcaaa gattaaaaaa cagacaatgg
     6301 aaagcccctt tccaaagact aaaaaataat caaataaaca aggagcatat atgaccactc
     6361 aattagatcc tcaacttggt ccacttcgta gtgagatcac ttttacgtta catacccaat
     6421 atgcccataa attatgggtg gggcgaccaa tgattcgtaa tgaggaaggc aaagtaactc
     6481 aatcctccat tatcagcgta ccaaattgct ttgcaatgct aacccaaatt caacgggctg
     6541 catcagaaga tgatccttat gctgacgatt atctgattca atttgaagaa agtgtgatca
     6601 attatcggaa ggaaatccaa aagctcacca acgacattgt cacgctctac gccaaaatgt
     6661 tgccggaggg aatttctatt gaacgctgtg ccaatatttc cccgatttct tacccgattt
     6721 atgttaattc acagctaggg tatcaattac tctacttact tggtgatttt gatagccttt
     6781 gccgttcagt aatgacggca gctcatattg cgattatcaa tcgtgcagaa gctcaagatt
     6841 ggattgaagc tggtgcaagg ttaatccgga aatgttttgg gatcgttgag cgttataaga
     6901 gttcaggaat cactcgtcgg gactatcaag aaaagaatgc tcgctatcaa gctgcgataa
     6961 aacgaatggg ctatacactc tcagatgctg tacttaccgg tgagcatcgt gctgagtttg
     7021 ctcccttcat caagcaaaac actactgttg aagaagagca atccgtagaa acccatatca
     7081 cggcacagac aaatgaatct caaaaataag gagtgatatg aacctcatct ctgatgaaat
     7141 ttatcggcaa ttagtcaaag attctgggct gaatacttct ctgaaacagc tatttagcca
     7201 ttttgacact ggctcagact atgaactttt gcaagaacag ttcactcaag ctcgggctta
     7261 ttttatggct gcacaggata gtatggtgca gtctgtgcgg caggatcttt cacctttggc
     7321 tgtttatatg attaaggata aggcctcatc ctcaggcggt acatttttac gctggcgtag
     7381 tatgcaaaat gccagaaccg gtggcacagt ttggcagccg attgtagatg ataagtctgt
     7441 cccagtggag gtgaggaaaa aagttgtcgc agtagaaaaa gacaggattt tgattaatat
     7501 gcagatttcg gtgtttaatc atattttgcg acagttggca gattgtgctg aaaagttgaa
     7561 agaggtagat aatgccgttg cgaaatcaga cttaaattcg tagtaaattt atatataaca
     7621 actcctatat tggttgtgtg taaacgccaa ccacggtggg ctgacgtggt aaaacaaaca
     7681 gtccgttaat taggacatat tcaagtttgt aatacctgaa aatccggttt gtaatccctg
     7741 aaaaagtgca gtttgtaaat cctgcattaa aaggcctttt aaaggtaagg gtacaagccc
     7801 cttaccttca cgaagaaaaa gcctttacaa cggaggaata agtgattgca cacgtaaaaa
     7861 tgaaaaattc actctaacca aattttaatt aaatactttt ttcttaggct gaatcaagtt
     7921 taatagaact aacttaattt attgaaggag taaatacgat ggcaggaatc aataaagtga
     7981 ttattgtcgg taatcttggc aacgatcctg aaatgcggac tatgcctaat ggtgaagcag
     8041 ttgctaatat tagtgtggca acttctgaaa gttggacgga taaaaatacc ggagaacgtc
     8101 gagaagtcac tgaatggcat cgtatcgttt tttatcgccg ttatgctgaa atttgtggtc
     8161 agtacctacg taaaggctct aaaatttata tcgaaggaaa attacggaca cgtaagtggc
     8221 aagaccaaaa cgggcaagag cgttatacaa ccgaaatcca aggtgaacta ttacaaatgt
     8281 tagatagccg taatgctaca aatagcgtag atggacaaca atctaactat caagctatga
     8341 gccaatctcc aaaagcaaca catccacaag atttaccaat ggataacttt gat
//
LOCUS       DANLTI010000112         8374 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.112, whole genome shotgun sequence.
ACCESSION   DANLTI010000112 DANLTI010000000
VERSION     DANLTI010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8374
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.112"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            173..2560
                     /locus_tag="PXB09_002105"
     CDS             173..2560
                     /locus_tag="PXB09_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDL5234181.1"
                     /translation="MEKMMRKINQLIISPYFFLSILSASANSDFWKSDLNFNLTNITK
                     RVGVDNFTTPVAGEPWAGIGPNGEAAGTAPLYYSRIPAMQVTEDNKLVVMFDLRWNRA
                     YDQDRIDPGIAISSDGGHTWTKKTAWSFDRTNHPARRSMDPTLLHNPIDNSLYVMHGT
                     WSMSDQQWYGGRVPHFNSGSWAATIYKSTDGGLNWEKNTEFSKFSNLDVFSKVTKNGK
                     PTLGFLGGVGSGIVMQDGTLVFPIQTAHQNGIATTIMYSKDNGKTWEMPEIDNPVAPN
                     QSSLENMVFELEPGKLVMTGRGNSRWAYSSTDMGKTWELFTPTNGLLPTSSQPTQGSS
                     IYVTLPNGRKVLLISKPDGKNDGWKRGDITLWMLDAKDPSHKHKVHIIRPGSGNAAGA
                     GYSSLAYKEGNLFVAFENDGDISVKNLTEHIAEMEAKAIEWGLPDELTPALDKINALP
                     YLNKAQKETLVEKMRRANDTAIAQSFVINKEMYNLKNNSDELDKLAKNITKALPSQQN
                     IYQRALAYVNKVTNTADTTYLNYNGIMDTYANLYESYLALNTKLDFTRYIQKARKFNE
                     YNTDILYRSFDNFFAHYDTGVKHNNLSLGLNTKLSENLRGGLFFEYSNKNRNSVQIGA
                     RAKYEMDNHQLSGFLRYRGVKHKDMLARNNSVDGYLNYAYRIQLDDKLSISPSVGAYV
                     SRSSRSLIDEDLAINSRTVYASDVGLNIHYKLNDIDAYIRPSIGFVNGDITLSQSNDM
                     TNTYKIKDKSNVYSVTTGLKKRFANGVALGADFKLHRYGSQTTESNFGLNVSYNW"
     gene            complement(2727..3263)
                     /gene="hpt"
                     /locus_tag="PXB09_002106"
     CDS             complement(2727..3263)
                     /gene="hpt"
                     /locus_tag="PXB09_002106"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDL5234182.1"
                     /translation="MEKHHIETLHSKEEVLNRINELAKEINQHYHQKQCQNLVVVGLL
                     RGSFMFMADLVRKLELPVEVDFLTASSYGSSTESSRDVKILKDLDGEIQGKDVLIVED
                     IIDTGFTLSKVGEILKLREPNSLAICTLLDKPCRREVDVPVKWVGFEIPDEFVVGYGI
                     DYAQKYRHLDYIAKVVIE"
     gene            complement(3302..4651)
                     /gene="pmbA"
                     /locus_tag="PXB09_002107"
     CDS             complement(3302..4651)
                     /gene="pmbA"
                     /locus_tag="PXB09_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDL5234183.1"
                     /translation="MSITDKQTLLQQEQELRQAVEFALNFAKQAGAEAEVGVTKVAGL
                     SVSSRLEQVENIEFNNDGSLGISVYLGKRKGNASTSDLQPESIQKTVEAALAIAKYTS
                     EDACTGLADKELLAFEAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGAT
                     FNSHSGVRVYGNTHGMLQSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPK
                     WVGEQAAIKAVDRLNPQRIKTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLD
                     KLGEQILPEWFAISERPHLLRQLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRK
                     MGLKSTGHAGGIHNWLVKPNRQGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAA
                     GFWVENGEIQYPVAEITIAGQLQDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE"
     gene            4750..5280
                     /locus_tag="PXB09_002108"
     CDS             4750..5280
                     /locus_tag="PXB09_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDL5234184.1"
                     /translation="MAKKRSKNEIDWTDEEEEIIWVSKSEIKRDSEHLKKIGAELIEL
                     TPQNLEKIPLDDDLKEAIRQAQGFKMEARRRQIQFIGKLLRNRDQEPIQEALDKVKNR
                     HNQQQALLHKLELVRNQLIAMGDASLDNLLTEYPQLDRQHLRNLIRGAIKEREANKPA
                     KNYREIYQYLKTEIVE"
     gene            5286..5657
                     /locus_tag="PXB09_002109"
     CDS             5286..5657
                     /locus_tag="PXB09_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HDL5234185.1"
                     /translation="MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIA
                     PHAVDTFLLITGIAAVAIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFKKGQPFS
                     LKFYLLAVVSFLLMMLTATFH"
     gene            5670..6383
                     /locus_tag="PXB09_002110"
     CDS             5670..6383
                     /locus_tag="PXB09_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDL5234186.1"
                     /translation="MIGPFVNAGAIILGGVLGACLGSHLPERIRTTLPLVFGLCCFGL
                     GMMLTASVKYMSAVALALILGTIIGELIYLENRIGKVAGLARGLIDRLFPPVHSLSQE
                     EFLEKFIALLVLFCVSGTGIFGAIKEGMTGDPSILYIKSILDFFTAMIFAASLGYAIA
                     AIAVPLIIVQGILILLATVIMPLTTANMMADFSATGGLLLFATGFRICGIKNFPVANM
                     LPALLLAMPMSYFWEWLVH"
     gene            6386..6949
                     /locus_tag="PXB09_002111"
     CDS             6386..6949
                     /locus_tag="PXB09_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDL5234187.1"
                     /translation="MKKRIIVGISGASGFQYGYKVLELLKPFSEIETHLVISKGAELT
                     RTLETDYTREALHDLADQIHSLNNVGASIASGSFKTEGMVIAPCSMRTLAAIANGLSD
                     NLLTRAADVVLKERRKLVLMVREAPLNLAHIDNMRKVTEMGGIIFPPIPAFYQKPTSL
                     DEMVTHSVSHALSLLDIDIPNTPHWGE"
     gene            7012..7452
                     /locus_tag="PXB09_002112"
     CDS             7012..7452
                     /locus_tag="PXB09_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDL5234188.1"
                     /translation="MHNPIPTHILDFIQTNHVVNIAAHTEQDFWAANCFYAFDQENVR
                     LIILTAKKTRHAGLMLENPHIVGTICGQIEKINEIEGVQFSATAECLEDKQAEKAALQ
                     IYYQKHPLARLKPSDVWVLSFNTIKHTGNKLMFAKKTIWERNII"
     gene            complement(7456..8331)
                     /locus_tag="PXB09_002113"
     CDS             complement(7456..8331)
                     /locus_tag="PXB09_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5234189.1"
                     /translation="MMKTILIDEANQIKGFSHLYRLRSDLMLKYTEISVTETVEQEPA
                     EFEAGLRLVILLSGRSEIDFNSEVFELDASLKPQAAFLPLNRAEMGRKIFRKGQLQKE
                     LVIFLYPKWLIESQLNLASYHHFKQHLKAHQIILTQSMLKLIHDIVSEQEMQPFGLLE
                     KEGNLLALLASAFSQLTQAPRLKKDRVQQLTELLESGKFDGWSLKQIAIYFHTNVTTL
                     QNEFQHYHKTSIFAYLRRSKLEQAYKLLLQGQSITQAAEFAGYANSENFSTAFKRTFG
                     ITPSQIKRDKAKGII"
BASE COUNT         2519 a         1665 c         1568 g         2622 t
ORIGIN      
        1 atcacttttt tcaataattg tgacaaatct ctcagatttt tctatttttt tgtgcttaaa
       61 tcttaagcat aaaatgccgt tataattact tgctatctgg tattttatac ataagattga
      121 accatataat agctgttcag ctaaaaatta gtctttgcac tttatccccc taatggagaa
      181 aatgatgaga aaaatcaatc agttaatcat atccccatac tttttcctaa gtattttatc
      241 tgcttccgct aactctgatt tttggaaaag cgaccttaat tttaatctca caaatattac
      301 caagcgtgtc ggagtcgata actttaccac tccagtagct ggcgagcctt gggctggtat
      361 tggtccaaat ggtgaagctg caggtactgc gccattatat tatagccgta ttccagctat
      421 gcaagttacc gaagataaca aattagttgt tatgtttgat ttacgctgga atcgtgcgta
      481 tgaccaagat cgtattgatc ctggtattgc gatttcttcc gatggtggcc atacttggac
      541 gaagaaaacc gcttggtctt ttgatagaac taatcaccca gcacgccgtt caatggatcc
      601 aacgctatta cataatccta ttgataatag tttatatgta atgcacggaa cttggtctat
      661 gtcggatcaa caatggtatg gtgggcgtgt tcctcacttt aatagtggca gctgggcagc
      721 taccatttat aaatctactg atggtggttt aaattgggag aaaaatactg agtttagtaa
      781 attcagcaat ttagacgtat tttctaaagt caccaaaaat ggaaaaccta ccttaggctt
      841 tttaggcggg gtcggatctg gaattgtaat gcaagatggt acgttggttt tcccaattca
      901 aaccgcacat caaaatggta ttgcgaccac tattatgtat tctaaggata atgggaaaac
      961 ttgggaaatg ccagaaattg acaacccagt tgcaccgaac caaagttctt tagaaaatat
     1021 ggtgtttgaa ctcgaaccgg gtaagctagt gatgactgga cgaggaaaca gtcgctgggc
     1081 atactcttct actgatatgg gtaagacctg ggaattattt actccaacta atggattatt
     1141 accaactagc tcacaaccaa ctcaaggctc ttctatctat gtaacactac caaatggtcg
     1201 aaaagtgcta ctaatctcta aaccagatgg aaagaatgat gggtggaaaa ggggtgatat
     1261 tacactttgg atgctagatg caaaagatcc atcgcacaaa cacaaggtgc atattattcg
     1321 tccaggttca ggtaatgccg ctggtgctgg ttattcctct ttagcctata aagaagggaa
     1381 tttatttgtt gcttttgaaa acgatggtga tatttcagta aaaaatttaa ctgaacatat
     1441 tgctgaaatg gaagcaaaag ctatcgaatg gggattacca gatgaactta ctcctgcttt
     1501 ggataaaatc aatgcactgc cttatctcaa taaagctcaa aaagagacgc tagtcgaaaa
     1561 aatgcgtcgt gctaatgata ctgcgattgc acaatctttt gtgattaaca aagaaatgta
     1621 taatctgaaa aacaatagtg atgagctgga taaattggca aaaaatatta ctaaagcact
     1681 gccgtctcaa cagaatattt atcaaagagc cttagcctat gtgaataaag tcaccaatac
     1741 agcggatacc acttatttaa attataatgg tattatggat acctatgcta atttatatga
     1801 aagctatttg gctttaaata ctaaattaga cttcactcgc tacatccaaa aagcgagaaa
     1861 gttcaatgaa tataacactg atattttata tcgtagcttt gataatttct ttgcccatta
     1921 cgacacaggt gtaaaacaca ataatctatc cttaggcttg aatacaaaat taagtgagaa
     1981 tttacgtggt ggcttattct ttgaatacag taataaaaat cgtaatagcg tacaaattgg
     2041 tgcaagagct aaatatgaaa tggataatca ccaactttct ggcttcttac gctatcgtgg
     2101 cgtaaaacat aaagatatgc tagcacgtaa taacagtgtt gatggctacc taaattatgc
     2161 ttatcgtatt caattagatg ataaattaag cattagccca tcagttggtg cttacgtttc
     2221 acgttcttct cgctcattaa tagatgaaga tcttgcgatt aatagccgca cggtctatgc
     2281 aagtgatgta ggattgaata tccattataa gctaaatgat attgatgctt atattcgtcc
     2341 aagtataggc tttgtcaatg gtgatataac tttatctcaa tctaatgata tgacaaacac
     2401 atacaaaata aaggataaaa gtaacgtgta ttctgtcacg acagggttga aaaaacgctt
     2461 tgcaaatggt gtggcattag gggctgattt caaattacat cgttatggtt ctcaaactac
     2521 tgaaagtaat ttcggtctaa atgtaagtta taactggtaa taccgtaaac tgattacgat
     2581 ttaaaagtta gactagccca agactgagtt ctatattcca tagagctcag tcttttaatt
     2641 tttctttctc gataagaata ttttatattt caaccttaat cgagaatgta attagtcgtg
     2701 aaaatctaag tagtgattga gtttttttat tcaatcacta ctttagcaat ataatctaaa
     2761 tgacgatatt tttgggcata atcaatccca taacccacca caaattcatc ggggatctca
     2821 aatcccaccc attttacggg cacatcaact tcgcggcggc aaggtttatc taataaagta
     2881 caaatagcaa gtgaatttgg ctcacgtaac ttgagaatct cccctacctt gcttaaggtg
     2941 aagccagtat caataatatc ttctacaatc aatacatctt taccttgaat ttcgccatct
     3001 aaatctttta gaattttgac atcacggctg gattccgtgc tgctgccata gcttgatgcg
     3061 gttagaaaat ccacttctac aggtaactct agctttctta ctaaatctgc cataaacata
     3121 aacgagcctc gcaataaacc aaccactaca aggttttggc actgtttttg gtgatagtgt
     3181 tgattgattt cttttgctaa ttcattgatt cggtttaata cttcttcttt tgaatgtagc
     3241 gtttcgatat gatgtttttc cattgatttc tccaaataaa attgattaca agcggccgtt
     3301 tttactcgcc tgaaaccatc attttttcta ataagattga acctgtttgg atatttgagc
     3361 ggtgttcaat atcatcgcct accgccacta aatttttata catatcttgc agttgccctg
     3421 caatggtaat ttccgctaca gggtattgaa tttcaccgtt ttctacccaa aatcctgctg
     3481 cacctcgaga gtattcccct gttacgctat taatcgcaga acctagcatt tccgttacta
     3541 ataatcctgt tcccatttcc ttaagtaacg tatttaaacc accttgacga tttggtttaa
     3601 ctaaccagtt atgaatacca cctgcgtgtc ctgtactttt taaccccatt ttacgccctg
     3661 aatagctagt cattaaatac gtttgtagca cgccatcagt aataatttca cggttttggg
     3721 taattacacc ttcactatca aacgcagaag aggctaattg acgcaacaaa tgcggacgct
     3781 ctgaaatcgc aaaccattca ggcagaatct gttcgcctaa tttatctaat aagaaacttg
     3841 atttgcggta taatgcaccg ccactaatag ctccggccaa atgccccact aaaccggttg
     3901 ccacatcgtt atagaaaatc acagacattt cgccggtctt aattcgttgc ggattcaatc
     3961 tatctaccgc tttaattgca gcttgctccc ctacccattt cggtgcttgt aatttatcaa
     4021 actcacggaa aatggtgtat tcataatcac gctcaagctg atcttcataa gctgaaatca
     4081 cgctacaaga gagtgaatat cggctcgaca ggtaactctg caacattccg tgcgtattgc
     4141 cataaacacg cacgccactg tgagaattga aagttgcccc gtcactattc acaatttttt
     4201 cgtctgcatt taaggcataa tgctccgctt caatcgccaa ttcgactgct tgatcaactg
     4261 aaatatccgc ttggtggtac aattccaaat cttctgcctc aaaggcaagc aattctttat
     4321 cagcaagccc ggtacaagca tcttctgagg tatattttgc aatcgcaaga gctgcttcaa
     4381 ccgttttttg aatcgactct ggctgaagat cggaggtgga agcattacct ttgcgtttgc
     4441 ctaaataaac cgaaataccg agagaaccat cgttattgaa ctcgatgttt tcaacttgct
     4501 ctaaacggct tgaaaccgaa agcccggcaa ctttagtcac gcctacttcc gcctctgccc
     4561 cagcctgttt tgcaaaattt aaggcaaatt cgaccgcttg tcgtagctcc tgttcttgtt
     4621 gtaacaaggt ttgtttatct gtaattgaca ttttgttcca ttgattgatt gcattgatga
     4681 atatattcta actcaaattt ctgttagaat acggcatttt ttagagttta tgtaatgaaa
     4741 ggataaagaa tggctaaaaa acggagcaaa aacgaaattg actggacaga tgaggaagaa
     4801 gaaatcatct gggtcagcaa aagtgagata aaacgagatt ctgaacactt aaaaaaaatt
     4861 ggggctgaat tgatcgaatt gaccccacaa aatttggaaa aaattccact agacgatgat
     4921 ttaaaagagg caattcgcca agctcaaggc tttaaaatgg aggctcgccg ccgtcaaatt
     4981 caatttatcg gcaaattatt acgcaaccgt gaccaggagc cgattcaaga agccttagat
     5041 aaagtgaaaa atcgccataa tcagcaacaa gccctattac ataaattgga attagtgcgt
     5101 aatcaactga ttgcaatggg cgatgcatca ttagataatt tattgacgga atatcctcaa
     5161 ttagaccgcc aacatttgcg taatttaatt cgtggggcaa ttaaagagcg tgaagccaat
     5221 aaaccggcaa aaaattaccg tgaaatttat caatatttaa aaactgaaat cgtggagtga
     5281 ttattatgga gtacctatca accattctta aagctcatat cggcttagct tatattagtt
     5341 taattttatt attaacccgt ggatttttat cgtcaaagat ggtggattgg cgacaatata
     5401 aaattttgcg cattgcccca cacgcagttg ataccttctt acttatcacc ggtattgctg
     5461 ctgtcgctat tttcttagct tatgattttt tcaccttagc acaattcagt tggttgctac
     5521 caaagttact cttcttagta ctttatattg tatttgcgac aaaagcgttc aaaaaaggac
     5581 aaccgttttc gctcaaattt tatctgttag ccgtagtctc attcttatta atgatgctaa
     5641 ctgccacttt tcactaaata agggaaacta tgatcgggcc ttttgtgaat gccggtgcaa
     5701 ttattttagg gggcgtgctg ggtgcttgtt tagggagtca cctgcctgaa cgtattcgca
     5761 ctacgttgcc gctggtattc ggcttatgct gtttcggctt aggtatgatg ctgactgcct
     5821 cagtaaaata tatgtctgcg gttgccttag cattgatttt aggcacgatc atcggtgaac
     5881 tgatttattt agaaaacaga atcggtaaag ttgccggttt agctcgtggt ttaattgacc
     5941 gcctattccc accggtgcat agtctttccc aagaagagtt tttagagaaa tttattgctc
     6001 tgcttgtact gttttgtgtg agcggtaccg gcatttttgg tgcaataaag gaaggaatga
     6061 caggcgatcc aagtattctt tacattaaat cgattctaga tttcttcacc gcaatgattt
     6121 tcgctgcttc gttaggctat gccattgcgg cgattgcagt gccgttgatt attgtgcaag
     6181 ggattttaat tctactggca accgtgatta tgcctttaac cactgccaat atgatggcag
     6241 atttctccgc aaccggcggt ttactgctat ttgcaaccgg ctttcgcatt tgtggaatta
     6301 aaaactttcc ggtcgcaaat atgctaccag cactactcct tgcgatgccg atgtcttatt
     6361 tctgggaatg gttggtacat taatgatgaa aaaacgtatt attgtcggca ttagtggggc
     6421 aagtggtttt caatatggct ataaagtgct tgaactgctg aaaccgtttt cagaaattga
     6481 aacccacctt gtaatcagca aaggagctga actcactcgt actctcgaaa cggattatac
     6541 ccgagaagct cttcatgatt tagctgatca aatacattcg ctaaacaatg tcggagcaag
     6601 cattgccagt ggttcattta aaaccgaagg tatggtcatc gccccgtgtt ctatgcgaac
     6661 ccttgccgct attgccaacg gtttgagcga taatttgctg acccgtgcgg cagatgtggt
     6721 gttgaaagaa cggcgtaaat tggtattaat ggtgagagaa gctccgctca accttgctca
     6781 tattgacaat atgcgaaaag tcacagaaat gggcggcatt attttcccac ccattccggc
     6841 gttttaccaa aagccaacca gccttgacga gatggtcacc cacagcgtaa gccatgccct
     6901 ttccctgttg gatattgaca ttccaaatac cccacattgg ggagaataat tcggcttatc
     6961 ttttgctttt tgaaatgcta gaatacctga taaaaactat caggtatttt tatgcacaat
     7021 ccaatcccga cccatatttt agatttcatt caaactaacc acgttgtcaa tattgcagct
     7081 cataccgaac aggatttttg ggcagcaaat tgcttttatg cctttgacca agaaaatgtt
     7141 cgcttgatta tcttaaccgc caagaaaacc agacacgctg gcttgatgct tgaaaaccca
     7201 catattgtcg gcacaatttg tgggcaaatt gagaagatca acgaaattga aggtgtccaa
     7261 ttctccgcta ccgccgaatg tttagaagat aaacaagccg aaaaagccgc tttgcaaatt
     7321 tattaccaaa aacacccgct tgcacggctt aagcctagcg atgtttgggt gttatcattc
     7381 aataccatca agcacaccgg taataaactt atgtttgcga aaaagacgat ttgggagaga
     7441 aatataattt gaagctcaaa taatgccttt agccttatcc cgtttgattt ggcttggtgt
     7501 tatcccaaaa gttcgcttaa atgccgttga aaaattctcc gaattggcat atccggcaaa
     7561 ttcagctgct tgtgtaatac tctgcccttg taatagtaat ttataggctt gttctaattt
     7621 agaacgcctt aaatacgcaa aaatagaggt tttgtggtaa tgctgaaatt cattttgtaa
     7681 tgtggtcaca ttggtatgga aatatattgc aatctgcttc aaactccagc cgtcaaattt
     7741 accgctctca agcaattctg ttaactgttg cacccgatct ttttttaacc ggggagcctg
     7801 tgtcagctga gaaaaagcac ttgctaataa agctaataga ttaccttctt tctcaagtaa
     7861 cccaaatggt tgcatttcct gctctgacac aatatcgtga ataagtttta acatactctg
     7921 agtcaaaata atttggtggg cttttaaatg ctgtttaaag tgatgatagc ttgccaaatt
     7981 taactggctt tctattagcc atttagggta gagaaagata acaagctctt tttgaagttg
     8041 ccctttccta aaaattttac gccccatttc agctctattt agcggtaaaa atgcggcttg
     8101 aggttttaaa cttgcatcta attcaaatac ttccgaatta aaatcaattt ccgatcgacc
     8161 actcaacaat ataaccaatc ttagtccggc ttcaaattcc gcaggttctt gctctacggt
     8221 ttcagtaact gaaatctctg tatatttcag cataagatct gaacgtagtc ggtataaatg
     8281 tgaaaaacct tttatttggt tagcttcatc aatcaagatt gttttcatca ttaaaaactt
     8341 tttttcgcat agtcaaaatt ttattttaca aagg
//
LOCUS       DANLTI010000113         8365 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.113, whole genome shotgun sequence.
ACCESSION   DANLTI010000113 DANLTI010000000
VERSION     DANLTI010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8365
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.113"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(85..169)
                     /locus_tag="PXB09_002114"
     tRNA            complement(85..169)
                     /locus_tag="PXB09_002114"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(133..135),aa:Leu,seq:tag)
     gene            complement(172..248)
                     /locus_tag="PXB09_002115"
     tRNA            complement(172..248)
                     /locus_tag="PXB09_002115"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(212..214),aa:Met,seq:cat)
     gene            complement(415..1239)
                     /gene="aroE"
                     /locus_tag="PXB09_002116"
     CDS             complement(415..1239)
                     /gene="aroE"
                     /locus_tag="PXB09_002116"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDL5234190.1"
                     /translation="MNRYAVWGNPIAQSKSPRIHQLFALQTQRNIEYIANLGDETAFE
                     QQLADFFASGAKGCNITAPFKERAFKLADEFSETALLAQACNTLKRLEDGRLYADNTD
                     GAGLVSDLERLGWLQKGHKTLILGAGGATKGVLLPLLKAGLEITLYNRTQEKAVVLAE
                     KFAKFGKIQTACLSDLANQLFNLIVNATSLGLQGKYVELPESVIASANIYDMQYAPNM
                     QTPFLNYARRCGATACQDGLGMLVGQAAFAFSLWEGQFPDVEPVLAQLKLEMQTVK"
     gene            complement(1246..1800)
                     /locus_tag="PXB09_002117"
     CDS             complement(1246..1800)
                     /locus_tag="PXB09_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDL5234191.1"
                     /translation="MNNFLEIVNQLKQEEVVAYPTEAVFGLGCNPQSEKAVRKLLVLK
                     QRPEEKGLILLASDLKYLLPYIDEARMTEQAWQRLSHIGEQAITWIVPVKNTVPSYLT
                     GKFDSIAVRLCNVPAVVQLCEASGVALTSTSANLSGEPPCRNAKEVIDQFGQDFPVLH
                     ADTLGRENPSEIRDIFSQQIFRQG"
     gene            complement(1793..2329)
                     /locus_tag="PXB09_002118"
     CDS             complement(1793..2329)
                     /locus_tag="PXB09_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDL5234192.1"
                     /translation="MVLFKSTKQTETCPQCGSPLQIKQGKKGLFLGCSAYPECDYIKP
                     LHQAGHIIKQLDELCPECGGNLQLKQGNYGIFIGCSHYPECYFIVHEEAEVEEEFDCP
                     ECKQHKLIARKGRSGKIFYGCIGFPNCKFTLATRPINHLCEKCGCELATIKKIKGKQF
                     TICANKSCQHQTELKPNE"
     gene            complement(2339..2650)
                     /locus_tag="PXB09_002119"
     CDS             complement(2339..2650)
                     /locus_tag="PXB09_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDL5234193.1"
                     /translation="MNREKITFFSRFEADILSGKKTITIRDKSESYFQPNQELAVFTN
                     ETDRFFANIKVLSVTPIVFDELNEQHAKQENMSLAELKQVIREIYPNDNAFFVIEFTL
                     I"
     gene            complement(2643..3119)
                     /gene="recX"
                     /locus_tag="PXB09_002120"
     CDS             complement(2643..3119)
                     /gene="recX"
                     /locus_tag="PXB09_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDL5234194.1"
                     /translation="MTTSTTKTNKYTAVNYLLYLLSKRDYSEQELRQKLKQKEYELTE
                     IDAAIEKAQANQWQSDERFCTTFIRYRSMQGIGPRRLKQELKLKGVKDWLINQELENA
                     EVDWFELAEQIFEKKRPLVWDLKAKQKMWRFMVSRGFYNDHFSHLMALDYSSDEYE"
     gene            complement(3178..4284)
                     /gene="recA"
                     /locus_tag="PXB09_002121"
     CDS             complement(3178..4284)
                     /gene="recA"
                     /locus_tag="PXB09_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDL5234195.1"
                     /translation="MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLG
                     DTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGK
                     TCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSV
                     AALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFG
                     NPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDI
                     MYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAIKWLKEHPEVASKIE
                     QDIRNLLISNPTFTATPDSENADNADDEFSEEEL"
     gene            complement(4385..5005)
                     /locus_tag="PXB09_002122"
     CDS             complement(4385..5005)
                     /locus_tag="PXB09_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDL5234196.1"
                     /translation="MCRFPLFETLSIIDGKVQNLQYHQQRFEQATQEYFGCEPRFSLA
                     DILVVPEASQRGKVRCRIDYNATEFELKFFIYSPKKVERFRLVEVENWDYHLKFSDRK
                     RFDLLPILQNEEVIILNNGYVSDCSIGNLLFLKQGIWYSPQHYLLKGTQLSKLLDEGK
                     VVLAKIAKQDLHQYEKIMLINALNPFEEPRALPCSQIYFCDLDRKS"
     gene            complement(4983..5957)
                     /locus_tag="PXB09_002123"
     CDS             complement(4983..5957)
                     /locus_tag="PXB09_002123"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDL5234197.1"
                     /translation="MQDFIHQANHYGQAKRPFFFLIDFEQQKPLIFPLEQAHASGLFF
                     EFFCKSNLEKPVEKPTKAFELSANPIPFSEYQTGFELVKKEIQAGNSYLLNLSYPTAI
                     ETNYSLAEIFAASKAKYKCYLQGRFVCFSPECFVRIENNRIFSYPMKGTINANEENAE
                     QKLMASEKEFTEHNTIVDLIRNDLALVAKNIEVTKYRYVEKVETHRGAILQTSSEICG
                     ELGENWQENIGSILAKLLPAGSISGAPKEKTVSIIQQAELGKRGYYTGIFGYFDGESL
                     ESAVAIRYIAQTSNGLVFHSGGGITSQSVLTDEYNELLEKVYVPISAI"
     gene            6067..7674
                     /gene="rmuC"
                     /locus_tag="PXB09_002124"
     CDS             6067..7674
                     /gene="rmuC"
                     /locus_tag="PXB09_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDL5234198.1"
                     /translation="MHFQEIGIYIALAVCVLVGVYLFFLKSRYQRNAYELSQDLGKIT
                     ENFEQIQQKYEVLAQEKNQLEQWAIQQQTKYEAVSERLNERDGQLQRFQQKIELAEQQ
                     ENQLERYINELKERVGSSQAKAESLEEQLQFSQSSLSTKERENQALFSRLNEVQNELT
                     ELRTTLSEKQANFEAQQRNFIEVKQQLNVEFQHLAQQILDEKSKRFSETNQSSLEALL
                     KPFKEQIEGFQKRVNEVHSESLKGSANLEAEIKRVLQIGVSMSEEAQNLATALKGNNK
                     IAGNWGEVQLESALQSAGLLAGEHYQAQESFRDEEGRRFAPDFVVHLPDQKHLIIDSK
                     VSLVAYDQAVRSEENFAISQALDEHCRSLRNHIEGLSKKNYSALLGIKSPDFVLMFIP
                     IEPAYIEAMKHDPQLFNFGYERNVILVSHTTLMPILRTVANLWRIERGNSEAREISEK
                     AGEIYNQVCAVADRLAKLGNTLNTANNQYNQTVTSLVGRQGLLGKVERFQHLSSKASQ
                     IVPQVELIENEVDTIKLEMVSRELLEE"
     gene            7737..8321
                     /locus_tag="PXB09_002125"
     CDS             7737..8321
                     /locus_tag="PXB09_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component II"
                     /protein_id="HDL5234199.1"
                     /translation="MLKKLLIIDNHDSFTFNLVDLLRKLDVPAKVVLVEELDLNEVEH
                     FSHILISPGPDVPRAYLQTFAMLERYHQTKSILGVCLGHQTICEFFGGKLYNLNDVRH
                     GQQRTLTQIEPNPIFKGLPKQLKVGLYHSWGILQNSLQNTPLVPTAVCDQNVLMAFKH
                     QHLPIFGVQFHPESFITEFGQQMLANWLEITQDF"
BASE COUNT         2447 a         1750 c         1630 g         2538 t
ORIGIN      
        1 attcgaacct agggatgccg agatcaaaac ccggtgcctt accgcttggc gataccccaa
       61 cactaatttt tgttaatcga taaatggtgc gggacgaggg acttgaaccc acacacctcg
      121 cggcgccaga acctaaatct ggtgcgtcta ccaatttcgc cagtcccgca atggtggcta
      181 cagcgagatt cgaacttgcg accccaacat tatgagtgtt gtgctctaac cagctgagct
      241 atgtagccat ttgcgttcac catatcggtc aacggagtgc attatgctga ttttagggct
      301 ttccgtcaaa tacttttttt aaaaaatttg aatttttgat tcgcttgtat agttattcgt
      361 cgttttggct taaatctagc attttttgtt tataaaataa tagcttatat tctgctattt
      421 caccgtttgc atttctaatt ttaattgagc cagtacaggc tcaacatcgg ggaattgccc
      481 ttcccacaaa gaaaacgcaa acgctgcctg tccaaccaac attcctaatc cgtcttggca
      541 cgctgttgct ccacaacgcc ttgcataatt gagaaaagga gtttgcatat tgggggcata
      601 ttgcatatcg taaatattcg ccgatgctat aacagattca ggcaattcaa catatttgcc
      661 ttgcagaccg agagaggtgg cattgacgat taaattaaac agttggtttg ccaaatcgct
      721 taaacaagcg gtctgaattt tgccaaattt tgcaaatttt tcggctaaaa cgaccgcttt
      781 ctcctgcgtg cggttatata gagtaatctc taaccccgct ttaagtaacg gaagtaatac
      841 gcctttggtt gctccacctg ctccaagaat taaggtttta tgcccttttt gtaaccaacc
      901 tagccgttcc aaatcagaaa ctaaaccggc cccgtcggta ttatcggcat ataaccgtcc
      961 atcttctaag cgtttaagcg tattacacgc ctgtgccaac aaagcggttt cgctaaattc
     1021 atctgccaat ttaaaggctc tttctttaaa aggggcggtg atgttgcaac cttttgctcc
     1081 agaagcgaaa aaatcggcta attgttgctc aaaagccgtt tcatctccta agttagcgat
     1141 atattcaatg ttgcgttggg tttgtaaagc aaagagttga tgaatacggg gggatttact
     1201 ttgagcaatc gggttgcccc acacggcata tcggttcatt tcggcttatc cttgtctaaa
     1261 aatctgttgg ctgaaaatat ctcgaatttc ggaagggttt tctctaccta gcgtgtctgc
     1321 gtgtaataca ggaaaatctt gaccaaactg atcgatgact tcttttgcat tgcggcaagg
     1381 tggttctccg ctcaaattgg cactggtaga ggtcaacgca acgccgcttg cctcacacaa
     1441 ctgaaccacc gccggcacat tacataaacg tacggcaata gaatcaaatt tgccggtgag
     1501 gtaacttggc acagtatttt taaccggtac gatccaagta attgcctgct cgccaatatg
     1561 gcttaggcgt tgccaagcct gttccgtcat tcgagcttca tcaatatagg gaagaagata
     1621 ctttaaatca gaagccagta aaattagccc tttttcctca gggcgttgtt ttaatacgag
     1681 taatttcctt accgcttttt cactttgtgg attgcagcct aagccaaaaa ccgcttcggt
     1741 tgggtaagct acaacttctt cttgctttaa ttgattaact atttctaaaa aattattcat
     1801 tcggttttaa ttctgtttgg tgctggcaac ttttgttagc acaaatggtg aattgcttgc
     1861 ccttaatttt tttgattgta gcgagttcac aaccacattt ttcacacaag tggttaatcg
     1921 gtcgagttgc taatgtaaat ttgcaattag ggaagcctat acaaccataa aatattttgc
     1981 ctgaacgccc ttttctagca atcagtttat gttgcttgca ttcagggcaa tcaaactctt
     2041 cttcaacctc agcttcttcg tgtacgatga agtagcattc agggtaatgg ctacagccga
     2101 taaaaatacc ataattgcct tgttttaatt ggaggtttcc gccacattca gggcaaagtt
     2161 catctaattg cttaataata tgaccggctt gatgtaatgg cttaatataa tcacattcag
     2221 ggtaagctga acaacccaaa aataaccctt ttttgccctg cttaatttgc aacggcgagc
     2281 cacattgtgg gcaagtttcg gtctgtttgg ttgatttgaa aagtaccata ttgatttgct
     2341 aaataagcgt aaattcaatc acaaaaaacg cattgtcatt cggataaatc tcccgaataa
     2401 cttgtttcaa ttcggctaag ctcatatttt cttgtttagc gtgttgctcg tttaattcat
     2461 caaacactat aggtgttacc gatagcactt taatattggc gaaaaatcta tcggtttcat
     2521 tagtaaaaac cgctaattct tggtttggtt gaaaataaga ttctgacttg tctcgaatcg
     2581 taattgtttt tttaccgctt aaaatatcgg cttcaaatcg gctgaaaaag gtaattttct
     2641 ctctattcat attcatcgct actgtaatcc agagccatta aatgactaaa atgatcgtta
     2701 taaaaaccac ggctaaccat aaatcgccac attttctgct ttgctttcag atcccataca
     2761 agcggtcgtt ttttctcaaa aatttgctca gctaattcaa accaatccac ttcggcgttt
     2821 tctaattctt ggttaattaa ccaatctttt acccctttaa gttttagctc ttgctttaaa
     2881 cggcgaggcc caatgccttg cattgaacga taacggataa aagtggtaca aaagcgttca
     2941 tcactttgcc actgattcgc ttgagctttt tcaatcgctg catcaatctc cgtgagttca
     3001 tactcttttt gctttagttt ttgccgaagc tcttgctcgc tgtaatcacg ctttgaaagt
     3061 aaatatagca gataattaac cgctgtgtat ttatttgttt tagtagtaga tgttgtcatt
     3121 tatcggttat aaataaaaat gcgattttca cgttgagcga aaaccgcata aatttaatta
     3181 gagttcttct tcactaaatt catcatctgc attgtctgca ttttcagaat ctggagtagc
     3241 cgtaaaagtt gggtttgaaa tgagtagatt tcgaatatct tgctcaattt tactcgccac
     3301 ttcagggtgt tcttttaacc atttgatggc attattttta ccctgaccga ttttctcccc
     3361 ttcataagag aaccaagccc ctgctttatt aatgaagccg tgagattccg ctaaaatgag
     3421 taattcattc atacgggcaa tgccctcacc gtacataata tcaaattgga cttcacggaa
     3481 cggtggagca accttgtttt tcacaatttt cacttttgtt tcgctaccga taacctcatc
     3541 accgtctttt actacgcctg aacgacgaat atctaaacgt actgaagcat agaatttaag
     3601 ggcattacca ccagttgtgg tttcagggtt accgaacatt actccaattt tcatacgaat
     3661 ttggttaatg aaaatcacca agcagttggt cgctttgata tttgcggtta atttacgcaa
     3721 tgcttgtgac attaaacgag cttgtaagcc catatgggaa tcacccatat cgccttcaat
     3781 ctctgctttt ggtgtaagtg ccgcaacaga gtccacaata attacatcaa ccgcaccgga
     3841 acgaactaac gcatcacaaa tttctaatgc ttgttcgcca ttatccggtt gtgaaattaa
     3901 taatccatct gtatctaccc ctaacttacg ggcgtaaata ggatcaagtg cgtgttcggc
     3961 atcaataaag gcacaagttt taccattttt ttgggcttga gccaccacag ataaagttaa
     4021 tgtagtttta cctgaagact ccggtccata aatttccaca atacgaccca ttggtaaacc
     4081 accaatgcct aatgctgagt ctaaaccaag agaaccggtt gaaactgctt caatatcaag
     4141 ggcttgagta tcgcctaact tcataattga gcctttgcca aattgctttt caatttgagc
     4201 taatgcggct gccaacgctt tttctttttg ttccggatca atctgtttaa ccggagtgtt
     4261 cttttgactt tttttctctg ccatattcta tcctttgtaa acttttatct aaaagcaacc
     4321 gcttgttgct gcaaaataac tgtatattat tatagtattt acttatccag ttgcaagcat
     4381 ttttttagga ttttcgatca agatcacaaa aataaatttg cgagcaaggc aatgcccttg
     4441 gttcctcaaa gggattaaga gcattaatca acataatttt ttcatattga tgcaaatctt
     4501 gcttggctat tttggctaaa acgactttcc cttcatcaag caatttacta agctgagtgc
     4561 ctttgagcaa ataatgttgc gggctatacc agattccttg ttttaggaac agtaaattgc
     4621 cgatggagca atcactgacg tagccattat tgagaataat cacctcttca ttttgtaaaa
     4681 tagggagcaa atcaaaccgc ttgcggtcgc taaatttgag gtgataatcc caattttcca
     4741 cctcaaccaa gcgaaaacgt tctacttttt tgggcgaata gataaaaaat ttcagctcaa
     4801 attctgttgc gttgtaatct attcggcaac gtactttgcc ccgttgagaa gcctctggca
     4861 caactaaaat atcagcaagg ctaaaacgag gttcacagcc aaaatattct tgtgttgctt
     4921 gctcaaaacg ttgttgatga tactgtaagt tctgaacttt gccgtcaata atcgaaaggg
     4981 tttcaaatag cggaaatcgg cacatagact ttctctaaca gttcattata ttcatcagtt
     5041 aacacacttt gtgaggtaat gccaccacca ctatgaaaca caagcccgtt tgaggtttga
     5101 gcaatgtaac gaattgccac cgcactttct aagctctcgc catcaaaata accaaaaata
     5161 ccggtgtagt aaccccgttt tcctaattct gcttgctgaa taatcgaaac cgttttctct
     5221 ttcggtgcac cgctaatgga gccggcaggt agtaattttg ccaatatcga accgatattt
     5281 tcttgccaat tttcacctaa ttcgccacag atctcggaac ttgtctgcaa aattgcccct
     5341 cgatgggttt ctactttttc cacataacgg tatttagtaa cttcaatatt tttcgccacc
     5401 aacgccaagt catttcggat caaatccaca atggtattat gttcggtaaa ctctttttcc
     5461 gaagccatta atttctgctc ggcattctcc tcatttgcat taattgtgcc tttcatcggg
     5521 taggaaaaaa tgcggttatt ttcaattcgc acaaagcatt caggggaaaa acagacgaac
     5581 ctgccttgca aataacattt atattttgct ttgctggcgg caaaaatttc cgccaatgaa
     5641 taattggttt caatggcagt cgggtagctc aaattcagca agtagctatt gccggcttga
     5701 atttcctttt tcactaattc aaacccggtt tggtattcgc taaacggaat cggatttgcc
     5761 gataattcaa aagctttagt cggtttttca accggctttt cgagattcga tttgcaaaaa
     5821 aattcaaaaa aaagaccgct tgcgtgagcc tgttctagcg gaaaaataag tggcttttgc
     5881 tgctcaaaat caattaaaaa gaaaaaaggg cgttttgctt gcccgtagtg attggcttgg
     5941 tgaataaaat cttgcataga aaacacaatg gctgaaattg gctgaatcat caaaagctct
     6001 gttataatgc aaagcaatag atttgaaaag cattttttaa aaaaggtttt accgatgaac
     6061 aacaccattc attttcaaga aattgggatc tacatcgccc ttgccgtttg tgtgctggta
     6121 ggcgtttatc tctttttctt gaaatcccgt tatcagcgaa atgcctacga attaagccaa
     6181 gatcttggca aaatcaccga aaattttgaa caaattcagc aaaaatatga ggtgttggct
     6241 caagaaaaaa atcagcttga gcagtgggca attcaacaac agaccaaata tgaagcagtg
     6301 agtgaacgtt taaacgagcg agatgggcaa ttgcaacgat tccaacaaaa aatcgaactt
     6361 gccgaacagc aagaaaacca gctggaacgc tatattaatg agctaaaaga acgtgtgggt
     6421 tcttcccaag caaaggcaga aagtttggaa gaacagctac aatttagcca aagttcactc
     6481 tcaactaaag agcgggaaaa tcaagcgtta tttagccgtt taaacgaggt acaaaacgag
     6541 ctgaccgaac tgcgtactac gctttcggaa aaacaggcaa attttgaagc acaacaacgc
     6601 aattttattg aggtaaaaca acagcttaat gtggaatttc aacatttggc acaacaaatt
     6661 cttgacgaaa aaagcaagcg ttttagcgaa accaatcaaa gctcgttaga agctctactg
     6721 aagccgttca aagagcaaat tgaaggcttt caaaaacggg tgaatgaggt acatagtgag
     6781 tcgctcaaag gctcggcaaa tttagaggct gaaattaagc gggtgctaca aattggcgtt
     6841 tcaatgtcgg aagaggcaca aaatctggca acggcattaa aaggcaataa taaaattgcc
     6901 ggcaactggg gtgaagtaca gcttgaaagt gccttacaat ctgccggttt actcgcaggc
     6961 gagcattacc aagcccaaga gagttttcgt gatgaagagg ggcgacgttt tgcccccgat
     7021 tttgtggtgc atttgccgga tcaaaaacat ctgattattg acagtaaagt ctcgttagta
     7081 gcgtacgatc aagcggtcag atcagaagaa aattttgcaa tttctcaagc cttagacgaa
     7141 cattgccgtt cgctacgcaa tcatattgag ggattgtcta agaagaacta cagtgcatta
     7201 ttaggcatta aaagcccgga ttttgtactg atgtttattc cgatagaacc ggcttatatt
     7261 gaagcgatga agcacgatcc gcaactgttt aactttggct atgaacgcaa tgtgattttg
     7321 gtttctcaca ccaccttaat gccgatttta cgcacggtcg ccaatttatg gcggattgaa
     7381 cgaggcaaca gcgaggctcg tgaaatcagc gaaaaagccg gcgaaattta caaccaagtg
     7441 tgtgcggttg ccgatcggtt agctaaatta ggtaacacgc taaataccgc aaataatcaa
     7501 tacaatcaaa ccgttacctc gttagtggga cggcaaggct tactgggcaa agtggaacga
     7561 ttccaacatc tttcaagcaa agcaagccaa attgtgccgc aggttgagct gattgaaaat
     7621 gaggtggata ctattaaatt ggaaatggta tcgagagaat tattggaaga atagtcaaat
     7681 ctctttattc cctacaaaaa tatggggtga tttgaaatac taaagaaaat aataaaatgc
     7741 taaaaaaact attaatcatc gacaaccacg actcttttac cttcaacttg gtggatttac
     7801 tccgtaagct tgatgtgccg gcgaaagtgg tgctggttga agagcttgac ctcaatgagg
     7861 tggagcattt tagccatatt ttgatttcgc ccggccctga tgtgccgaga gcctatctac
     7921 aaacctttgc gatgttggag cgttatcatc aaaccaaatc aattctaggc gtttgcttgg
     7981 ggcatcaaac gatttgcgag ttttttggcg gcaagttgta taacctaaac gatgttagac
     8041 acgggcagca acgcacgctc actcaaattg agcctaaccc catatttaaa ggtttgccta
     8101 agcagttgaa agttgggttg tatcactctt ggggcatttt gcaaaattcg ttgcaaaata
     8161 caccgcttgt accaaccgca gtttgcgatc aaaatgtgtt aatggcgttt aaacaccaac
     8221 atttgccgat ttttggcgtg cagtttcacc cggaatcttt tatcactgaa tttggtcaac
     8281 aaatgttggc aaattggctt gagattacac aagattttta gcgtgaaatc cgctataatc
     8341 cgtcagttat ttaccctttt aaaat
//
LOCUS       DANLTI010000114         8344 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.114, whole genome shotgun sequence.
ACCESSION   DANLTI010000114 DANLTI010000000
VERSION     DANLTI010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8344
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.114"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(158..796)
                     /locus_tag="PXB09_002126"
     CDS             complement(158..796)
                     /locus_tag="PXB09_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5234200.1"
                     /translation="MELKHTIEQRKTIKAFNSTIKISRTELEEMVALSQLAPSKANLQ
                     PWRFVIIDVEILKAALSKNVAFNGPPCETASAIVVILADLQYEKLLGAIVDQSVETGC
                     LHKEFRERKFDFLLNLHNQATQAEIRDQVLIDTSLAAMQLMLIAKDKGYDTHAIGVFE
                     RPAVLKLLNIDAERYLPVMLLAIGKAANPALPSCRLPLEYTVSWNDGQGFKI"
     gene            complement(938..1732)
                     /locus_tag="PXB09_002127"
     CDS             complement(938..1732)
                     /locus_tag="PXB09_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5234201.1"
                     /translation="MALLEVNHLNKRFVERSSLFHKQDFYAVKEVSFTLNRKETLAII
                     GENGAGKSTLAKMVAGMVGPTSGELIFRGTPLSFGDYKYRAKHIRMMFQDPNDAFDPN
                     YNIGQILDAPLRLATDLNEEERNERIFNTLKLVGMYPEQALVPISEASSGQKQRIAFA
                     RALILEPEIIIADDTINSLDFSVKTQLINLMLSVQQRQGIAYIYVGQNLGLIKHIADK
                     IMVMQSGEVVEYGLTKEVLLNPQHQITKRLIESHFGKHLSSYAWAS"
     gene            complement(1833..2909)
                     /gene="fbaA"
                     /locus_tag="PXB09_002128"
     CDS             complement(1833..2909)
                     /gene="fbaA"
                     /locus_tag="PXB09_002128"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDL5234202.1"
                     /translation="MSLLNIVKPGVVTGDDVQKVFAYAKEHNFAIPAVNCVGSDSVNA
                     VLETAARVKSPVIVQFSNGGAQFYAGKGIKPASGARADVLGAIAGAKHVHQLAEEYGV
                     PVILHTDHAAKNLLPWIDGLLEAGEKHFAETGRPLFSSHMIDLSEEPIEENMEICREY
                     LARMDKIGMTLEIEIGVTGGEEDGVDNSDVDESKLYTQPSEVLYVYDQLSPISPRFTI
                     AAAFGNVHGVYKPGNVKLKPSILGASQEYVSKERGLPAKSLDFVFHGGSGSSREEIRE
                     AISYGAIKMNIDTDTQWAAWDGILQFYKANEAYLQGQLGNPTGPDAPNKKYYDPRVWL
                     RKMEESMSKRLEQSFEDLNCVNVL"
     gene            complement(3006..4181)
                     /locus_tag="PXB09_002129"
     CDS             complement(3006..4181)
                     /locus_tag="PXB09_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDL5234203.1"
                     /translation="MSVIKMTDLDLAGKRLFIRADLNVPVKDGKVTSDARIVATIPTL
                     KLALQKGAKVMVTSHLGRPTEGVFEEENSLQPVVDYLNASDLGVPVRLVRDYLDGVEV
                     NENEIVVLENVRINKGEKKNDPELAKKYASLCDVFVMDAFGTAHRAEGSTYGVAEYAP
                     VACAGPLLATELDALGKALKEPQRPMLAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI
                     ANTFIAAEGHAVGKSLYEEDLIPEAKRLAQVTNIPVPVDVRVGTEFSETAPATEKAVS
                     EVRADESIFDIGEKSSEQLAEIIRNSKTILWNGPVGVFEFPNFRKGTEVISNAIAEAT
                     ANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAVEILEKRANG"
     gene            complement(4436..5794)
                     /locus_tag="PXB09_002130"
     CDS             complement(4436..5794)
                     /locus_tag="PXB09_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5234204.1"
                     /translation="MANQQQERQSWSNRLAYIMTVAGATVGFGATWRFPYLVGEHGGG
                     AYVFLFCIAMIVIGIPMILVENVIGRRMRVNAIDAFAGFANGKKIASGWKILGYMGLL
                     GAFGILAYYMVLGGWVLNYIGSLLTGTLDLSQPVTVGTTQQFFQQSIFNSPMTIIAYT
                     ALFVLVNYFILVKGIVDGIERSVKYLMPILFIFLIVMVVRNITLPGAAEGIAFYLMPD
                     FSKITPKLFVFVLGQVFFALSLGFGVLITLSSYLDKSENLVKTATITGVMNTLIAVLA
                     GFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSNMWGGTVFAVIFFSLLVVAALTTSLTI
                     YEVIITALQEKAKISRQKAIFITLATIFLLGNIPSALSDNILQDVQVMGKSIFDAFDY
                     ISGNILFILTALGSAIFVGFVLKEEAKEELGAGKMFTTIWFNYVRFVIPVIILVIFFN
                     SL"
     gene            complement(5864..6691)
                     /locus_tag="PXB09_002131"
     CDS             complement(5864..6691)
                     /locus_tag="PXB09_002131"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HDL5234205.1"
                     /translation="MNHPKHRAFLKWAGGKYRLIPDIQTHLPKKACLVEPFVGAGSVF
                     LNTDFERYILADINPDLINLFNVVKADVEEYIAQTKQLFLHPQANTEAFYKARRAEFN
                     RSKDIFRRSVIFLYLNRFGYNGLCRYNQKKGYNVPFGRYKTHYFPEKELRFFAEKAQK
                     ATFVCADFEQVFELAKNQLTDYVIYCDPPYAPLAQETNFTQYAGGGFSLEQQGRLATL
                     ALEMKGLGVPVLISNHDTDFTRRIYQSADITQIQVQRSIGQKVGSRVKVGELFALFI"
     gene            complement(6705..7793)
                     /gene="aroB"
                     /locus_tag="PXB09_002132"
     CDS             complement(6705..7793)
                     /gene="aroB"
                     /locus_tag="PXB09_002132"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDL5234206.1"
                     /translation="MLQVNVELKERRYPIIIGAGLLNQPASYSPLKSGDKVMIVSNPT
                     VATHYLSVVTNALKELGCHVDSVLIPDGEEYKTLESLNLIFTALLEKNHNRDTTLIAL
                     GGGVIGDVAGYAAASYQRGIRFIQIPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     VSVIVDTNTLHTLSKREVSAGLAEVIKYGAIFDVTFFEWLEKHIDDLVSLKQDELEYC
                     IQRCCQLKADVVARDETEKGDRALLNLGHTFGHAIEARMGYGVWLHGEAVSVGMLEAA
                     ELSRILGDLSPQEVARLEKLLARANLPTISPDGMEPAEYLPYMWRDKKVLAGQLRLIL
                     LKSLGEAYVSSQATESQVLASIERFTQR"
     gene            complement(7817..8338)
                     /gene="aroK"
                     /locus_tag="PXB09_002133"
     CDS             complement(7817..8338)
                     /gene="aroK"
                     /locus_tag="PXB09_002133"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDL5234207.1"
                     /translation="MAEKRNIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAG
                     ADIDWIFDVEGEEGFRKREERILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIY
                     LETTVDKQFERTQRDKKRPLLQTEDPRKTLEELAKIRNPLYEEIADITIHTDEQSAKV
                     VANQIIDMIDNLQ"
BASE COUNT         2603 a         1834 c         1424 g         2483 t
ORIGIN      
        1 ccaacgactt gcgaaaataa ttttacctaa aatatttgcc ctagtattta attccgaatg
       61 catatatctc ctataaatag caatacaaaa ataaattaca acgctcaaat tttaacaatt
      121 ttttgccaaa aaattaagat atttaaccgc ttgcacctta tattttaaaa ccttgtccat
      181 cgttccaaga aaccgtatat tctagaggta aacggcaact tggcaacgct gggtttgctg
      241 ctttaccgat agctagtagc ataacaggca aataacgttc tgcatctata ttcaataatt
      301 ttaatacagc agggcgctca aacacgccta tcgcatgagt atcatagccc ttatctttgg
      361 caattagcat taattgcatt gccgccaaac tagtatcaat taatacctga tctctaattt
      421 ctgcttgagt tgcttggtta tgaagattta gtaaaaaatc aaatttacgt tcacgaaact
      481 ctttatgcaa acacccagtt tctaccgatt gatcaacaat tgcgcctaat aatttttcat
      541 attgcaaatc tgccaatatc accacaatag cagacgctgt ttcacaaggt gggccattaa
      601 aggcaacatt ttttgataat gctgctttaa gaatttcaac atcaataatg acaaaacgcc
      661 aaggttgcag atttgctttt gagggagcaa gctgggataa agcgaccatt tcttctaatt
      721 cagttctact aatcttaatt gttgaattaa aagctttgat agttttacgc tgttcaatcg
      781 tatgtttcaa ttccatctct tttctcctat ctctcaaaca attgagatag tctataattt
      841 aaagattagg aatgtaataa ttgaaaagag ttattctgca tatttattga aataggtcaa
      901 aattatcaag taatcatatt agagcaggag taaagattta gcttgcccaa gcataggaac
      961 taaggtgctt tccaaaatga ctttcaatta aacgtttcgt aatttgatgt tgcggattca
     1021 gtaaaacctc tttcgtcaag ccatactcta ctacttcgcc actttgcatc accattattt
     1081 tatcggcaat atgtttgatc agacctaaat tttgccccac ataaatataa gcaatccctt
     1141 gtcgctgctg gacacttaac attaaattaa ttaattgtgt tttgactgaa aaatccagtg
     1201 aattaatcgt atcatccgca ataataattt ccggttctaa aattaaagca cgagcaaacg
     1261 caatacgctg cttttgccca ctggaagcct ctgaaatagg aacgagcgct tgctcaggat
     1321 acattcctac caattttagc gtattaaaaa tacgctcatt tctttcctct tcatttaaat
     1381 ctgtcgccaa gcggagcgga gcatctaaaa tttgtcctat attataatta ggatcaaagg
     1441 catcgttagg gtcctgaaac atcatacgaa tatgcttagc tcggtattta taatcgccaa
     1501 atgaaagcgg tgttcctcta aaaatcagtt ctccagatgt tggcccaacc ataccagcaa
     1561 ccattttagc caaggtagat ttcccagctc cgttttcacc aataatcgct aaagtttcct
     1621 tgcgatttag ggtaaaagaa acttctttta ccgcataaaa atcttgttta tgaaataggc
     1681 tactacgttc aacaaaacgc ttattcagat gattaacttc aagtaatgcc ataataaatt
     1741 ggtgcttgga aataaagtga tagtttaccg caaaaaataa ataaaaaaag accgcttata
     1801 caagcggcct gatttatgga attttttgca aattataaaa cgttcacaca gtttaagtct
     1861 tcgaaagatt gctctaagcg tttagacata gactcttcca ttttacgtaa ccaaacacgt
     1921 ggatcgtagt attttttgtt tggtgcatca gggcctgtcg ggttacctaa ttgaccttgt
     1981 aaatatgctt cgtttgcttt gtagaattga agaataccgt cccacgcagc ccattgggtg
     2041 tcagtgtcaa tgttcatttt gattgcaccg tagctgattg cttcacgaat ctcttcacgt
     2101 gaagaaccag aaccgccgtg gaaaacgaag tctaatgact ttgccggtaa accacgctct
     2161 ttagatacat actcttgtga agcacctaag attgatggtt ttaattttac attacccggc
     2221 ttgtaaacac cgtgtacgtt accaaatgct gccgcaatcg tgaaacgtgg gctgattggg
     2281 cttaattggt cgtaaacata taaaacttca gaaggttggg tgtaaagttt agattcatct
     2341 acatcagaat tatctacgcc atcttcttca ccaccggtta cgccgatttc gatttcaagg
     2401 gtcataccga ttttgtccat acgggctaaa tattcacggc agatttccat attttcttcg
     2461 attggctctt cagataaatc gatcatatgt gaagagaata acggacgacc ggtttctgcg
     2521 aagtgttttt cgcctgcttc aagtaagcca tcgatccaag gtaataagtt tttcgcagcg
     2581 tggtcggtgt gaagaatcac aggcacacca tattcttctg ctaattgatg aacgtgtttt
     2641 gcacccgcaa tcgcccctaa tacatctgca cgagcgcctg aagccggctt aatgccttta
     2701 cccgcataga actgcgcacc accatttgag aattgcacga ttaccggtga ttttacacga
     2761 gcggctgttt ctaatacggc attaactgaa tctgaaccca cgcagtttac tgccggaata
     2821 gcgaagttgt gttctttagc ataagcgaaa actttttgta cgtcgtcgcc tgttactaca
     2881 cccggtttta cgatgtttaa taatgacatt tttttcttcc tttgtatgaa atgtgcaaaa
     2941 gcacattgtt aaaatatacg gccaaatctt gcaaaatttt cacaaaattt gaccgcttgt
     3001 aactgttagc cgttagctcg tttttctaag atttccactg ccggtaatac tttaccttcc
     3061 acgaattcta agaacgcacc gccaccggtt gaaatgtaag aaattttgtc tttgataccg
     3121 aataaatcaa tcgcagctaa ggtatcgcca ccaccggcaa ttgagaatgc accgtttgcc
     3181 gttgcttctg caatcgcatt tgaaatcact tctgttcctt tacggaagtt agggaactca
     3241 aacacgccga ccggaccatt ccaaaggatg gtttttgaat tacggataat ttcagctaat
     3301 tgctctgacg atttttcacc aatatcgaaa attgattcat cagctcgtac ttcactcacc
     3361 gctttttccg ttgccggtgc agtttcagag aattcagtac ctacacgcac atcaaccgga
     3421 acaggaatat tggttacttg tgctaaacgt tttgcttcag ggattaaatc ttcttcgtat
     3481 aatgatttac ccacagcgtg accttctgcg gcaataaagg tattggcaat accaccgccc
     3541 acgattaatt ggtcggcaat ttttgaaagc gaatcaagca cagttaattt agtagatact
     3601 ttagaaccac ccacaatcgc taacattgga cgttgtggct cttttaatgc tttgcctaat
     3661 gcatctaatt cagtggctaa taacggacct gcacacgcaa caggggcata ttctgccaca
     3721 ccgtaagttg aaccttccgc acggtgagct gtaccgaatg cgtccattac aaacacatca
     3781 caaagtgatg catatttttt tgctaactca gggtcgtttt tcttctcacc tttgttaata
     3841 cgcacgtttt caagcaccac gatttcattc tcgtttactt caacaccgtc taagtaatca
     3901 cgcactaaac gaacaggaac acctaaatct gatgcattta agtaatcaac tacaggttgt
     3961 aaagagtttt cctcttcaaa tacgccttct gtcggacgac ctaaatgcga agttaccatt
     4021 actttagcac ctttttgtaa cgctaatttt aaggttggaa tggtagcaac aatacgggca
     4081 tctgatgtta ctttgccatc ttttaccggt acgttaaggt cagcacgaat aaataaacgt
     4141 ttacccgcta aatcaaggtc agtcatttta ataacagaca tagtttgttc ctctttagat
     4201 taaaatttaa aagtgataac ggtcggatta tatcagtttc taatcatttt gggctaacct
     4261 agatcaaata aatgattaat tttttatcat tttagaatgc tattatcctg actgttctta
     4321 ttccccccca atatgcttgg ttaattaagc aagaattgca aattccccac aaaatttaac
     4381 cgcttgtcac taaaaataaa gctgtttgaa aatccattca aacagcttat agaatttaga
     4441 gtgaattaaa gaaaatcacc aagataatca ccggaatcac aaagcgaaca tagttaaacc
     4501 aaatagtggt aaacatttta cccgcaccta attcctcctt cgcctcttct tttagaacaa
     4561 agccaacgaa aatcgcgcta cctaaggcgg ttaaaataaa cagaatattg ccactaatat
     4621 aatcgaaggc atcaaaaatg ctcttgccca taacctgcac atcttgcaat atattgtcac
     4681 ttaatgctga tggaatatta cccaacagaa aaatagtagc caaagtaata aaaatagctt
     4741 tttgacggct aatctttgcc ttctcttgca atgcagtgat aataacttca taaatagtta
     4801 acgaggttgt taatgccgcc accactaata gactaaaaaa gataaccgca aaaactgttc
     4861 ccccccacat atttgagaac acaatcggca aactttggaa tactaaagtc ggacctgaat
     4921 ttggagcaac gccaaagcta aataatgacg gaaaaatcat aaaaccggca agtaccgcaa
     4981 ttaaggtgtt catcacccca gtaattgttg ctgtttttac taaattctcg ctcttatcaa
     5041 ggtagcttga aagggttatc aacacaccaa aaccaaggct taatgcaaaa aatacttgac
     5101 ccagcacaaa cacaaacaat tttggtgtga tttttgaaaa atcgggcatc agataaaagg
     5161 caatgccttc agcagccccc ggtaaggtaa tatttcgaac caccatcaca atcaggaaaa
     5221 taaacagaat cggcatcaaa tatttcactg aacgctcaat accgtccaca atgcctttta
     5281 ccaaaataaa ataattcacc aatacaaaaa gtgccgtata agcaataatt gtcattgggc
     5341 tattaaaaat actttgttgg aagaattgtt gggtcgtgcc aacggtaaca ggttgagaca
     5401 gatctagtgt ccccgtgagt aagctaccga tataatttaa tacccaacca ccaagtacca
     5461 tatagtaggc aagaatacca aatgctccaa gcaagcccat atagccaaga attttccaac
     5521 ctgaggcaat ttttttacca ttagcaaaac cggcaaaagc atcaatagca ttcactctca
     5581 ttcggcgacc aattacattc tccactaata tcatagggat accaattacg atcatcgcaa
     5641 tacaaaataa aaacacataa gcaccgcctc cgtgttcccc cacaagataa gggaaacgcc
     5701 aagttgcacc aaaaccgact gttgcaccag caacggtcat aatatacgcc aatcggttag
     5761 accaagattg gcgttcttgt tgttgatttg ccatttaata ctccatcggc taacaatacc
     5821 gcttcaacca acaagcggtc agatttttag aaaatattac aaattaaatg aagagtgcga
     5881 ataactcgcc aactttaacc cttgagccca ccttctgccc tattgaacgc tgtacctgaa
     5941 tttgggtaat atcggcagat tgataaatcc tacgggtaaa atcagtatcg tgatttgaaa
     6001 ttaatacggg aacgcctaat cctttcattt ctaaagccag tgttgccaaa cgcccttgtt
     6061 gctctaggct aaaaccaccg ccagcatatt gcgtaaaatt cgtttcttgt gctaaaggag
     6121 cgtaaggtgg gtcgcagtaa atcacataat ccgttaattg attttttgcc aactcaaaga
     6181 cctgttcaaa atccgcacac acaaaagttg ccttttgtgc tttttcagca aaaaaacgta
     6241 gttctttttc tggaaaataa tgggttttat aacgcccaaa gggaacattg tacccttttt
     6301 tctggttata acggcaaagt ccgttatagc caaatcgatt taaatacaaa aaaatcaccg
     6361 agcgacgaaa aatatctttt gagcgattaa actccgcacg gcgtgcttta taaaaggctt
     6421 ctgtattcgc ttgtgggtga agaaacagtt gctttgtttg cgcaatatat tcctcaacat
     6481 ctgctttcac cacgttgaaa agattaatca agtcaggatt aatatcagca agaatataac
     6541 gttcaaaatc tgtattcaga aagaccgaac ctgcaccaac aaaaggctcg actaaacaag
     6601 ccttttttgg caaatgggtt tgaatatctg gaattaagcg atatttaccg ccagcccatt
     6661 ttaaaaaggc tcgatgctta gggtgattca tttcatttta aacattaacg ttgggtaaaa
     6721 cgctcaatag aggctaatac ttgagattct gtggcttgcg atgaaacgta agcttcacca
     6781 agtgatttca ataaaattag gcgtaattga cctgccagta cttttttatc tcgccacata
     6841 taaggtagat attctgccgg ttccattcca tcaggtgaaa ttgttggcaa attggctcgg
     6901 gccaataatt tttccaagcg agcaacctct tgaggactta aatcccccag aatacgagat
     6961 aattccgcag cctctagcat accaaccgaa acagcctctc cgtgtaacca tacaccatag
     7021 cccatacgtg cttcaatggc gtgaccaaag gtatgtccta agtttagtaa tgcacgatct
     7081 cctttttccg tttcatctcg agcaaccacg tcagctttta gctggcaaca acgctgaata
     7141 caatattcca gctcatcttg cttgagactg accaaatcat caatatgctt ttcaagccat
     7201 tcaaaaaaag taacatcaaa gattgcaccg tatttgatga cttccgccaa accagcactg
     7261 acttctcttt tggataaggt atggagcgta ttggtatcaa caatcacaga aacaggctga
     7321 taaaaagccc caatcatatt tttaccgagt gggtggttta ctgccgtttt cccgcctact
     7381 gaagaatcaa cttgagccag taaagtggtc ggaatttgta taaaacgaat accacgttgg
     7441 taagaggcag ctgcatagcc tgcaacatca ccgattacac caccgcctaa agcaattaaa
     7501 gtggtatcgc gattatgatt tttttctaat aatgcggtaa aaatcaaatt taatgattct
     7561 agcgttttat attcttcacc gtcgggaatc aataccgaat caacgtggca acccagctcc
     7621 tttaacgcat ttgttaccac actaagataa tgtgtcgcca ccgttggatt tgagacaatc
     7681 atcaccttat ctccagattt taatgggcta taactagcag gctgatttaa taaccctgca
     7741 ccaattataa tcgggtaacg acgctctttt aattccacat tgacttgtaa catatcttag
     7801 ctcctttctt acctggctac tgtaaattat caatcatatc aataatttga tttgccacta
     7861 ctttagcgct ctgctcgtcc gtatgaatag taatatctgc aatttcttca tacaatgggt
     7921 tacggatttt cgctaactct tccaacgttt tacgggggtc ttctgtttgc aataaagggc
     7981 gttttttatc tcgctgagta cgttcaaact gtttatccac tgtcgtttct aaataaataa
     8041 cgataccacg agccgataac acattacggt tatctttaga taaaatcgaa ccaccgccag
     8101 ttgaaagcac gataccataa ttttgcgtca gttcatttag aatacgttct tcacgcttac
     8161 ggaaaccctc ttcaccttca acatcgaaga tccaatcaat atccgcacct gctcgttctt
     8221 cgatcacact gtcggaatcc ataaattcca tacctaatgt ttgagcaagc tgacgaccaa
     8281 tcgtactttt acctgctccc atcggcccaa tcaaaaaaat attacgtttt tcagccatta
     8341 tttc
//
LOCUS       DANLTI010000115         8279 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.115, whole genome shotgun sequence.
ACCESSION   DANLTI010000115 DANLTI010000000
VERSION     DANLTI010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8279
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.115"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1155)
                     /gene="fabB"
                     /locus_tag="PXB09_002134"
     CDS             complement(<1..1155)
                     /gene="fabB"
                     /locus_tag="PXB09_002134"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDL5234208.1"
                     /translation="MKRVVITGLGVISSIGNNKEEVLESLKAGKSGIEFVPEFAEVGM
                     RSQVAGTIKLNPAELIDRKIYRFMGDAAAYAYLSMKEAIEDSGLTEEQVSNDRTGLVI
                     GAGTGSAHSQLVACDAVRGPRGVKAVGPYAVTKTMASSVSACLATPYKIRGVNYSISS
                     ACATSAHCIGHAMELIQLGKQDVVFAGGAEELSWECATEFDAMGAVSTKYNETPTKAS
                     RAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA
                     ERCMRQAMATVNGEIEYINVHGTSTPVGDVKELGAIRNVFGDKTPAISSTKSMTGHSL
                     GAAGAHEAIYSLLMLDNNFIAPSINIETLDEQAQGMNIVTERQDKALTTVM"
     gene            1416..3953
                     /locus_tag="PXB09_002135"
     CDS             1416..3953
                     /locus_tag="PXB09_002135"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDL5234209.1"
                     /translation="MKTLTLTANKITAVEGAAIGANQGSFAQKLNSTKARIDQLNAYR
                     IERAINANNHHFMHVFSLIPLLIHLNHPVLPAYVENAPQGIWHFQLSDYQKQFLVSYR
                     FDEAISADHLGPHPSFDALYSMGSTGTITQTSCSDLDLWLCYPNHFTIEQYKLMELKI
                     NKLQEWAKTFQIDINIYLMNPEQFKSQTYNSSVTDEHSGSAQHFFLLDEFYRSAILLA
                     GKRLLWLHLHKNEYQNVHNNPEIDLTEWIDFGDFSSLSTSEFFGASLWQLYKGINNPY
                     KSAIKILLLECYAHTYPKTKLISKEFKKKLLSDNALEYHFDPYLAMLELVTEHLRSRK
                     EWVKLDRLRVCFYAKAVEGEINNNWRSRDLDELVNQWSWSEKQIQLLQNRQHWKIKQV
                     MNHENMLIDHLLQSYRNLIHFARKFHINPSIMTNDTDILMRKLYSVFEALPGKISLIN
                     HKISSNLAEKAITFIEAKVGSALQPGWYLVNQAPKSRYDSENRYVHYNKSPIKLIAWG
                     YFNGIINAATNLHTVSPNLDIEKLRQFITDLRLSFPIQAPEVTNDDMHHPNEIRNLVI
                     ALNLVQDPTEHIDELPKKVYPSDLFNFGKAQKTLVGSVSIIYRNVWNEIRTQHFDGED
                     AILKALKLVSNRIYQGNSSPQSVNVFCYSKYLRSELRDFVADLVHKCITIQTGCLLQE
                     NEFSTLKVAGKTWQFLFHKKTFSIKQIDEQQAVENLNSFAKTKQNAKSENEKKKEFPQ
                     QISEFASEGFLQFFFEDNVDNSFNVYVVDERNNVESYYNCFGNKEEKIRKINKLQNEK
                     QLKTETPASFGSFNHPQFYQLISPNGELCIVPFQSRQHLDYLAQKHH"
     gene            3984..5852
                     /locus_tag="PXB09_002136"
     CDS             3984..5852
                     /locus_tag="PXB09_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDL5234210.1"
                     /translation="MSGLVSPELIKTVALLATSVTIVPLFKRLGLGSVLGYLVAGCLI
                     GPSGIGLFQDPAAVVHMAELGVVMFLFIIGLEMHPELLWAMRKAIFGRGFLQVAICGT
                     LLTLAGIYLLGFSKEVAFIAGMGFTLSSTAIVMQVLEDKGISSTPKGQRIVATLLFED
                     LAIVPLLASVAFLAPNQVDAESSTNWSAIGLSLVAVLILVASGKWLMNPIFRVISKAK
                     VREMMTAAALLVVLGSALLMEISGLSMAMGAFLAGVMLSESSFRHQLEADIEPFRGLL
                     LGLFFMGVGMSLDLSLVLNNWLWLLVIVAVYVIGKGLGIFIAASITRLTLNESIVRTT
                     IMAHGGEFAFVLFSAAATAGILTPDTHATLTAAVIVSMLLSPLLILIKQGVRKKKAKN
                     ESTNMTGVELPEDLEANVLVIGFGRFNQIVCQALLAKGLSVSVIDSNTDHIRAAARFG
                     FKLYYGDGARLDVLRASGIANANCVIVGVGNPERTEKIVELIKSEYPLVPVFARTYDR
                     QSAVDLVKKHHVDYHIRETFESALALSQAAIERLGSSEEEAKQIISYVRRLDAERFNE
                     ELLHGFSAEVIRKYWVPTPWVNPQHEGSALNEETADILEELGETVEVIKVDITDKN"
     gene            complement(6012..6908)
                     /gene="malM"
                     /locus_tag="PXB09_002137"
     CDS             complement(6012..6908)
                     /gene="malM"
                     /locus_tag="PXB09_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDL5234211.1"
                     /translation="MKKTLLSTAIFFAHLLVVSPSIANGSAGKSIHINSAELAQIQWQ
                     DVPFSQTVKTDLSEQHKQAFTTAFAGIASPVAAYRIPANQGTLEIEIESPVMDKNVFV
                     PTAVVLDSQFNVASTYPSSEFKLLEERGLKGSRLGAELNLTPAMNQDYIYLLIYTTQQ
                     DLAKTTMMPHPAKTYAKATGKQPPAINDIEVAHSLKGQIHINVTGSNGTKFIGLPTEI
                     FSSNKAATPAAKTAIPLPIKENPVAVKTAVDKDTEAYFNQAVMKAIKAKDINKAMNLV
                     NEAEKLGLTSPRQIFLKNVSSN"
     gene            complement(6989..8278)
                     /locus_tag="PXB09_002138"
     CDS             complement(6989..8278)
                     /locus_tag="PXB09_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HDL5234212.1"
                     /translation="MKKTVLAVAISGAMFAASASAVDFHGYARSGIGWTSGGGEQSAF
                     TVNGGGSKYRLGNESDTYAELKLGQELFKSGEKSIYFDTNLAYGGTLHNNDWTPTSPA
                     LRELNVQFKNFADSLPGATLWAGKRFYQRHDVHMNDFYYWDISGPGAGVENIDLGFGK
                     LSLAVTRDTERGGANTFGYTTVYKLDPSTGKIKLDKQRNKADVYNDIFDVRLAGIELW
                     KDGSLELGFDYGNAHAKKGAALEKGATKNGYMVTAEYTQGNFFGGFNKFTAQYATDSM
                     TSWNNGHAQGSKADNKGNMLRLINQGVVQASDKVEVMYALIYEKTKLDNKQGKTWYSA
                     GIRPMYKWNDTMSTLLEVGYDRIKDQATGKKNDLVKYTVAQQWQAGNSIWARPAIRVF
                     GTYARWNDKFNTKARTDAGYKAKDGEFITGVQFEAWW"
BASE COUNT         2448 a         1692 c         1545 g         2594 t
ORIGIN      
        1 catcacggtt gttaatgctt tgtcttggcg ttcagtcaca atattcatac cttgtgcttg
       61 ttcatcaagg gtttcaatat taatgcttgg tgcaataaaa ttattatcta acattaataa
      121 tgaataaatt gcctcgtgcg cacctgctgc acctaatgag tgtccggtca ttgatttggt
      181 tgatgaaatt gctggcgttt tatcaccaaa gacattacgg atcgccccta actcttttac
      241 atcacccact ggagtagaag tgccgtgtac gttaatatac tcgatttcac catttacagt
      301 tgccatcgcc tgtctcatac aacgctcagc accttcacca cttggcgcga ccatatcgta
      361 accgtctgag gttgccccat agcccacaat ttcagcatag attttggcac cacgagcaag
      421 agcgtgttct aactcttcca ccacaaccac tgcaccacca ccggcaatca caaaaccgtc
      481 acgattagca tcataagcac ggctagcttt tgttggtgtt tcattatatt tagttgaaac
      541 agcacccatt gcatcaaact cggttgcaca ttcccaagaa agttcttctg caccacctgc
      601 aaacaccaca tcttgtttac ctaattggat taactccatc gcgtgtccaa tacagtgtgc
      661 tgaagtcgca caagctgagc tgattgaata gtttacacca cgaattttat aaggtgttgc
      721 caagcatgct gacacacttg atgccattgt tttggttact gcgtaaggcc caacggcttt
      781 cacaccacgt gggccacgta ctgcatcaca agctacaagt tgactgtgcg ccgagcctgt
      841 accagctccg atcaccaaac cggtacgatc gtttgaaact tgttcttcgg ttaagcctga
      901 gtcttcgatt gcttctttca ttgaaagata agcgtaagcc gcagcatctc ccataaaacg
      961 atagatttta cggtcaatta actcagccgg atttaattta atcgtacctg ccacttggct
     1021 acgcataccc acttcagcaa actcaggcac aaattcaatg cctgatttac ctgcttttag
     1081 tgattccaac acttcttctt tgttgttacc gatactggaa attacaccta atcctgtaat
     1141 aacgactctt ttcattttgt ttccttcatc attttgatct gaaaaatact tgattcagct
     1201 tacacttgtt cactcaaata agctactaaa acttgattat tttacacaat ttcattactg
     1261 gtctgaactc tttctatcaa gatagcggtt gaatttcaga cattttttgc aaaataggga
     1321 atgaaattta atttcccgat tttttaccct attacataat aatcactttt ccgctaaaat
     1381 gctaaacagt tcacacttta gtaaggaaag ctgacgtgaa aacattaacc ctgacagcca
     1441 acaaaataac agccgtagaa ggcgctgcca ttggggcgaa ccaggggagc ttcgcccaaa
     1501 aattaaactc tactaaagca cgaattgatc aacttaatgc ataccgaata gaacgagcta
     1561 tcaatgctaa taatcatcat tttatgcatg ttttctctct cattccattg cttattcatc
     1621 ttaatcaccc tgtgttaccg gcttatgttg aaaatgcacc acaagggatt tggcattttc
     1681 aactctctga ttatcaaaaa caatttctgg tttcttaccg ttttgatgaa gcaatctctg
     1741 ccgatcattt gggcccccat cccagctttg atgctcttta ttcgatgggt agcaccggta
     1801 ctattaccca aacaagctgt tctgatttag atttatggct atgctatccg aaccatttta
     1861 caattgaaca atataagtta atggagctca aaattaataa attgcaagaa tgggcaaaga
     1921 cattccaaat cgacatcaat atttatttaa tgaacccaga acaatttaag agccaaactt
     1981 ataacagtag cgtaaccgat gaacacagtg gttcagcaca gcattttttt ctattagatg
     2041 aattttatcg ttcagctatt ttacttgccg gtaagcgttt actctggttg catttacata
     2101 aaaatgaata ccaaaatgtt cacaataacc ctgaaattga cttaacggaa tggattgatt
     2161 tcggcgattt ttccagcctt tcaaccagtg aattttttgg tgcaagctta tggcagctct
     2221 acaaaggaat taataaccct tataaatcgg caattaaaat tttattgctc gaatgctacg
     2281 ctcacactta tcctaaaaca aagctcatct ccaaagaatt taagaaaaaa ctactaagtg
     2341 acaatgcttt ggaatatcac tttgatccct acttagccat gcttgaattg gtaacagaac
     2401 acttaagatc acgcaaagag tgggtgaaat tagaccgctt gcgagtctgt ttttatgcaa
     2461 aagcggttga gggagaaata aataacaact ggagaagtcg tgatttagac gagctggtta
     2521 accaatggtc ttggtcagaa aaacaaattc aattacttca aaaccgtcaa cattggaaaa
     2581 ttaagcaagt gatgaatcat gagaatatgc tgattgatca tttactacaa agttatcgaa
     2641 atttaattca ttttgctcga aaatttcata ttaatccgag cattatgaca aatgatactg
     2701 atattttaat gcgaaaactt tattctgtat ttgaagcact tccaggaaaa atatctttaa
     2761 ttaatcataa aatatcgtcc aatttagcag aaaaagcaat tacatttatt gaagctaaag
     2821 ttggatctgc gttacaaccc ggttggtatt tagttaatca ggcacctaaa agtcgttatg
     2881 actctgaaaa tcgttatgtc cattataata aaagcccgat taagcttatt gcttgggggt
     2941 attttaacgg cattattaac gcagcaacta atttacatac tgttagccct aatttagata
     3001 tcgagaaatt gcgacaattt atcaccgact tgcgcttatc tttcccaatt caagcgccgg
     3061 aagtgaccaa tgatgacatg catcacccta atgaaattcg caatttggtt atagcgctta
     3121 atttagtaca agatccaacc gaacatatcg atgaactacc aaaaaaagtt tatccaagcg
     3181 atctgtttaa ttttggtaag gcacaaaaaa cgttagttgg tagtgtgagc attatttatc
     3241 gaaatgtatg gaatgaaatt cgaactcaac attttgacgg tgaagatgct attttaaaag
     3301 cactaaaatt ggtatccaat cgaatttatc aaggaaattc ttcacctcaa tcagttaatg
     3361 ttttttgcta tagtaaatat ctacgtagtg agttacgtga ttttgtggca gatttagttc
     3421 ataaatgtat tacaattcag actggttgtt tactgcaaga gaatgaattt agcactttaa
     3481 aagtagcagg aaaaacctgg cagtttcttt ttcataaaaa aacatttagc attaaacaaa
     3541 ttgatgaaca acaagcggtt gaaaatttaa attcttttgc aaaaaccaag caaaatgcta
     3601 aaagcgaaaa tgaaaagaaa aaagaatttc cgcagcaaat tagtgaattt gccagtgaag
     3661 gctttttaca gtttttcttt gaagacaatg tcgataatag ttttaatgta tatgttgtag
     3721 atgaacgtaa taatgtcgaa agttactata actgtttcgg caataaagaa gagaaaatca
     3781 ggaaaatcaa taaattacaa aatgaaaaac aattaaaaac agaaacacca gcatcatttg
     3841 gaagctttaa tcatccacaa ttttatcaac ttatttcacc aaacggtgag ttatgtattg
     3901 tgccgtttca aagccgccag catttagatt atttagcaca aaaacatcat taatcttatt
     3961 tatattatac aggtgggaat tctatgtcag gattagttag tccggaatta attaaaacag
     4021 tcgcattact tgcaaccagc gtcactattg taccgctatt taaacgcctt ggtttaggaa
     4081 gcgtattggg ttatttagtc gcaggatgtt taatcgggcc atcgggcatt ggattgttcc
     4141 aagaccctgc cgctgttgtg catatggcag aacttggcgt ggttatgttt ttgtttatta
     4201 ttggtttgga aatgcacccg gaactgcttt gggcgatgcg taaagccatc ttcgggcgag
     4261 gtttcttaca agttgcgatt tgcggtactt tattaacctt agccggcatt tacttattag
     4321 gtttttccaa agaagtggca tttattgccg gtatgggttt tacgctatct tctactgcca
     4381 ttgtaatgca agtgctggaa gataaaggga taagttccac gccaaaaggg caacgtattg
     4441 ttgcaacttt actatttgaa gatttagcga ttgtgccatt attagcctcg gttgcctttc
     4501 ttgctcctaa ccaagtagat gctgaatcca gtactaattg gtctgctatt ggtcttagcc
     4561 tagttgccgt tcttattttg gttgcgagtg gaaaatggct gatgaaccct attttccgtg
     4621 ttatttctaa agccaaagta cgagaaatga tgactgccgc tgccttactt gtggtattag
     4681 gctccgctct tttaatggaa atcagtgggc tttcaatggc aatgggggca ttccttgccg
     4741 gagtaatgct ttcggagtct tctttccgcc atcaactaga agctgatatt gaacccttcc
     4801 gtggtttact tttaggctta ttctttatgg gcgtaggaat gtcattagac ctcagcctcg
     4861 tcctcaataa ttggctatgg ttattggtga ttgtagcagt ttatgttatc ggtaaaggcc
     4921 ttggaatctt cattgctgcc tctatcaccc gattaacact gaatgaatct attgtgcgaa
     4981 ctaccattat ggctcacggt ggtgaatttg cctttgtgct attctcagcc gccgcaaccg
     5041 ctgggatttt aaccccagat actcacgcta ccttaaccgc tgcggtaatt gtctcaatgt
     5101 tgctttcccc acttctcatt ttaatcaagc aaggagtgag aaagaaaaaa gcgaaaaatg
     5161 aatccactaa tatgacaggg gttgaattac cggaagattt agaagccaat gtattagtca
     5221 tcggttttgg acgctttaac caaatagtct gccaagcctt attagccaaa ggactaagtg
     5281 tatcggttat tgattcaaat actgatcata ttcgtgctgc tgctcgtttt ggttttaaac
     5341 tttactatgg tgatggagcg agactagatg tacttagggc atctggcatc gccaatgcaa
     5401 actgcgtaat tgttggcgta ggcaatccgg aaagaacgga gaaaatcgta gagctgatta
     5461 aatctgaata ccccttagta cctgtatttg cgagaaccta tgatagacaa agtgcggttg
     5521 atttagtcaa aaagcaccac gttgattatc acattcgaga aacctttgaa tcagccctcg
     5581 cattaagcca agccgccatt gaacgcttag gttctagcga ggaagaggca aaacaaatta
     5641 tcagctatgt tcgccgatta gatgcagaac gctttaatga ggaattatta cacggtttct
     5701 ccgcagaagt tatccgcaaa tattgggtac caacaccttg ggtaaatcca caacacgaag
     5761 gtagtgcact taatgaagaa acggctgata ttttagaaga gcttggtgag acagtagaag
     5821 ttataaaagt ggatatcact gataaaaatt aaagaattta tactttgaat ccttattcaa
     5881 gtataagcct tcctatacat atcgcataat cactcgtaaa aaagcaccct atcggcataa
     5941 tctgataggg tgttaatggt aataaaccat cgcacgatga caaggagaat atctatgaaa
     6001 aaaacaataa atcaatttga acttacattt tttaagaaaa tttggcgtgg agaagtcagc
     6061 cctaattttt ctgcctcgtt aaccaaattc atcgctttat taatatcttt tgctttaatc
     6121 gctttcatta ccgcctgatt aaaataggct tccgtatctt tatctactgc tgtttttact
     6181 gcaactggat tttcttttat cggcaacggt atagccgttt tagctgccgg cgttgctgct
     6241 ttgtttgagc tgaaaatttc agtcggtaat ccaataaatt tagtgccgtt cgagccggta
     6301 acgttgatgt gaatttgccc ttttaaactg tgtgctactt caatatcgtt aattgctggt
     6361 ggttgtttac cggttgcttt tgcataggtt tttgccggat gcggcatcat cgtggttttg
     6421 gctaaatctt gctgcgtggt ataaatgagc aagtaaatat aatcttggtt cattgccggc
     6481 gttaaattaa gttctgcccc taaacggcta cctttgagtc ctcgctcttc caataattta
     6541 aactcagaag aggggtaagt tgatgccaca ttaaattgac tatccaacac gactgccgtg
     6601 ggtacaaaaa catttttgtc catcaccggg ctttcgattt caatttccaa tgtgccttga
     6661 tttgccggaa tacgataagc tgcaaccggg ctggcaatac cggcaaacgc tgtggtaaat
     6721 gcttgtttgt gttgctcgct tagatctgtt tttacggttt gtgaaaatgg cacatcttgc
     6781 cattgaattt gagctaattc agccgagtta atatgaatag acttacctgc cgagccattt
     6841 gctatactcg gagacaccac caaaagatgg gcgaagaata ttgctgtcga aagaagcgtt
     6901 tttttcatat taacccctaa aaatcgtgaa ataggataaa gtgctgaaat agtgggtagg
     6961 taatcctacc cacacaaagg tttgatgatt accaccaagc ttcaaattga acaccggtga
     7021 taaactcgcc gtctttggct ttatagccgg catcggtacg agctttcgtg ttgaatttat
     7081 cattccaacg tgcataagta ccaaacacac ggattgcagg gcgagcccaa atgctattac
     7141 cagcctgcca ttgttgtgca acggtgtatt ttaccaagtc atttttcttg cctgttgctt
     7201 gatctttaat gcgatcataa ccaacttcta ataatgtact cattgtatca ttccatttgt
     7261 acattgggcg aatacctgct gagtaccaag ttttaccttg tttattatct agttttgttt
     7321 tttcgtagat taaggcatac attacttcaa ctttatcact cgcttgcact accccttggt
     7381 tgattaaacg aagcatatta cctttattat ctgctttcga accctgtgcg tgcccattat
     7441 tccaagaagt catagagtcg gttgcatatt gtgcagtaaa tttattgaaa ccaccaaaga
     7501 agttaccttg agtgtattcc gctgttacca tataaccgtt tttggttgct cctttttcaa
     7561 gggctgcacc tttcttagca tgtgcattac cgtaatcaaa gcctaactct aacgaaccat
     7621 ctttccaaag ctcaataccg gctaaccgaa catcaaaaat atcgttgtaa acatcggctt
     7681 tattacgctg cttatctaat ttaattttac ctgtgctagg atctaattta taaactgtag
     7741 tatatccaaa agtattcgcc cctccacgct ctgtatcacg agtaaccgct aaagagagtt
     7801 ttccgaagcc taaatcaata ttttcaaccc ctgcacccgg acctgaaata tcccagtaat
     7861 agaagtcatt catatgtaca tcatggcgtt ggtaaaaacg tttaccagcc cataaggtgg
     7921 cacctggtaa actatctgca aagtttttga actgtacatt taattcacgt agtgctggac
     7981 ttgttggtgt ccaatcatta ttgtgaagcg taccgccgta agcaaggttt gtatcaaagt
     8041 agatagattt ctcaccactt ttgaataatt cctgacctaa tttcaattct gcataggtat
     8101 cagattcgtt acctaaacgg tattttgaac caccaccatt taccgtgaat gcggattgct
     8161 cccccccccc cgatgtccaa ccgatacctg aacgtgcata tccgtggaaa tcaaccgctg
     8221 atgcactggc tgcgaacatt gcaccactga ttgcaactgc taggactgtt tttttcata
//
LOCUS       DANLTI010000116         8247 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.116, whole genome shotgun sequence.
ACCESSION   DANLTI010000116 DANLTI010000000
VERSION     DANLTI010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8247
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.116"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(14..4474)
                     /gene="mukB"
                     /locus_tag="PXB09_002139"
     CDS             complement(14..4474)
                     /gene="mukB"
                     /locus_tag="PXB09_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDL5234213.1"
                     /translation="MIDTTELQNNPQIAPLARPNDVQRGKFLSLTLINWNGFFARTFD
                     LDDLVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTAGSRDKGLYGKLK
                     AGVCYAVLESFNSRGQRIITGVRLQQIVGRDKKVDIRSFSLQNIPQEQSIISLLTEQV
                     GNKARVLALNELKDQFENSEVQFKQYHSITDYHSFMFDLGVIPKRLRSAADRSKFYKL
                     IEASLYGGISSVITKSLRDYLLPENTGVRQAFQDMESALRENRMTLEAIKVTQSDRDM
                     FKRLITESTNYVSADYMRNANERRGNVQQALEQRKEWYAAKSKILLEQQRFVEFSRES
                     ADIAEAELALEADYNSANDHLNLVMNALRHQEKIERYQDEVEELNIKLEEQQEALEEI
                     AEIAENAQARADEADDHVEELRSQMADYQQALDAQQTRALQYQQAVNALEKAKQLTGL
                     VNLDLNNIEDYHAEFVAQAEDLTDQVFELEQRLSVSDMAKTQFEKAFELVCKISGEID
                     RLQAWEEARALLSAFPEQKMQAQQAVSLRQKLNDLEQRLQQQQNAQRLVAEFNQKSQQ
                     QLNSAEELDAYFEEQQARLEDLEAELSDFVEQRSTQRQQREQLNQQYQQLAKNAPAWH
                     TAQSALTRLEEQCGEKFEASQSVMQFMQNMLSKEREATLARDELARKEQMLDEQINRL
                     SQPDGSEDARLNQLAERFGGVLLSELYDDVSIEDAPYFSALYGEARHAIVVRDLEAVK
                     TQLEKLDDCPSDLYLIEGDPSAFDDAVFSAEELGEGVVVKVSDRQWRYSKFPEVPLFG
                     RAAREKHLATLKAERDETAEKHAERAFDVQKCQRLHQHLSQFIGTHLNLAFQENPEML
                     MQEIAAERAEIERELAQSAGNEQQLRHQLESVKAQLQMLNKILPLANLLADETLEARA
                     EECREQLELAEEDEMFIRQFGATLSQLEPIAAALKSDPALFEQLEADYRRSVAEQKVL
                     QQKVFSLADVMNRRLHFSYQETVGTEGSALTEQLRQRLENAQREREQARDQLRQAQAQ
                     LSQYNQVLTGLRSSYEAKNQMLQELIREIDDLGVRGDSGAEERARFRRDELQQRLSQQ
                     RSRKGYLDKQIAVIEAEMDNLNRTLRKAERDYHTQRELVVQAKASWCIVQRLSRNSDV
                     EKRLNRRELAYQSAEELRSISDKALGALRTAVADNEYLRDSLRASEDSRKPENKVAFF
                     IAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTNELTGREKKLAISAESVANILR
                     KTIQREQQRILQLNQGLQNIAFGQVKGVRLVVNIRDTHAILLNALSNNREEHKDLFDS
                     QKLSFSEALAMLYKRVNPHIEMGQRTPQTIGEELLDYRNYLDLEVETFRGADGWMRAE
                     SSALSTGEAIGTGMSILLMVVQSWEEEARRMRAKDILPARLLFLDEAARLDATSINTL
                     FELCERLDMQLLIAAPENISPERGTTYKLVRKITNNQEYVHVVGLKGFAK"
     gene            complement(4650..5366)
                     /gene="mukE"
                     /locus_tag="PXB09_002140"
     CDS             complement(4650..5366)
                     /gene="mukE"
                     /locus_tag="PXB09_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDL5234214.1"
                     /translation="MTENIQDFISPKLALAIANPIFPELDSQLRAGRHINTEQLDQHV
                     FLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLY
                     LSPERLAQQGIFSQDDVYEELLSLADESKLLKAVNPRSTGSDLDRAKLAEKAGGALRR
                     LARIGIITRVGEQNSKKFVISESVFRFGADVRTGDDPREAQLRLIRDGEATTPALLNE
                     QAVEIDENIADEAPFDGENE"
     gene            complement(5415..6758)
                     /gene="mukF"
                     /locus_tag="PXB09_002141"
     CDS             complement(5415..6758)
                     /gene="mukF"
                     /locus_tag="PXB09_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDL5234215.1"
                     /translation="MQNELAQTIPELISWTKDREFSLSLSSDRLAFLLAISIYNQEQT
                     DGELLESDLIDLFRYVSNSFEQSDATFTQRANNAINDLVRQRLLNRFSSEFTEGLAIY
                     RVTPLGVGISNYYVRQREFSTLRLSIQLSIVADEIQRASVAAEEGIEQAQDERFWRNN
                     VFAPLKYSVAEIFDSIDLSQRIMDENQHQIRERIAELLSQNWHEAIMSCEQLLDETSG
                     NLRELQDTLNAAGDKLQAQLLRIQSCLMARNDLDFIDQLIVNLQNKLDRIISWGQQAI
                     DLWIGYDRHVHKFIRTAIDMDKNRVFGQRLRQSIQDYYNSPWLLYTAKADSLLDLRDD
                     EAMLNEAESVGELPSELEYESLSDVQEQIVSAMQAHLAPFRAEGKPIDLGVILREQLA
                     RFPESRHFDVARIIVDQAVKLGMASQDSQAVYPQWQPINEQGAEVQANVIDQYNK"
     gene            complement(7023..7910)
                     /gene="galU"
                     /locus_tag="PXB09_002142"
     CDS             complement(7023..7910)
                     /gene="galU"
                     /locus_tag="PXB09_002142"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDL5234216.1"
                     /translation="MKVIIPVAGLGTRMLPATKAIPKEMLILADKPLIQYIVNECVAA
                     GFKEIVLVTHSSKNAIENHFDTSFELETMLEKRVKRQLLDDVRSIVPKDVTLIHVRQG
                     QAKGLGHAVLCGRTVVGDEPFAVVLPDVLLGEFTANQKTENLAAMVKRFQETGYSQIM
                     VAPVPMENVSSYGVADCHGVDIPLGGAAPIAKMVEKPSIEEAPSNLAVVGRYVFSSNI
                     WNLLEKTPVGVGDEIQLTDAIDMLIHQETVEAFHMTGRSFDCGYKVGYMKAFVEYSLN
                     HDKCGKEFKAFIKELAKSL"
     gene            complement(8046..8231)
                     /gene="csrA"
                     /locus_tag="PXB09_002143"
     CDS             complement(8046..8231)
                     /gene="csrA"
                     /locus_tag="PXB09_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDL5234217.1"
                     /translation="MLILTRKIGEVLLVGDDVEITVLSIRGNQVKLGVNAPKEISVHR
                     REIYERIKASVEEENAE"
BASE COUNT         2193 a         1946 c         1626 g         2482 t
ORIGIN      
        1 aaagtgctaa gttttattta gcaaagcctt ttaaaccaac aacgtgaaca tactcttggt
       61 tattggtgat tttacgcacc aatttataag ttgtgcctcg ttcagggcta atattttcag
      121 gggctgcaat taataactgc atatccaaac gttcgcagag ttcaaatagc gtattaattg
      181 aggtagcatc taatcgagcc gcttcatcta agaacaataa gcgagccggt agaatatctt
      241 tggcacgcat acggcgagct tcttcttccc agctttgaac taccattaag agaatcgaca
      301 tacctgtacc gatcgcctca ccggtcgata atgcactact ttctgcacgc atccagccgt
      361 ctgcaccacg gaaggtttcc acttctaaat ctaagtagtt acggtaatcc aataactctt
      421 caccaatggt ctgtggtgta cgttgcccca tctcaatatg agggttcacc cgtttataca
      481 acatcgctaa ggcttcggag aagctcagtt tttggctgtc gaataaatct ttgtgttcct
      541 cacgattatt ggataacgca ttgagtaaaa tagcgtgcgt atctcggata ttcaccacca
      601 aacgcacccc ttttacctga ccgaatgcaa tattttgtaa accttggttc agttgcaaaa
      661 tgcgttgttg ttcacgctga atggttttac gtaaaatatt tgccacactt tccgcactga
      721 tcgccagttt tttctcacga ccggttaatt cattggttaa gcgtgaaagc tcgatttcca
      781 tctgctcaat cgcatcaatc ggatcatcgg ttttgataat gtcttggcga atccgctcac
      841 gcaaatgctg ataaaccgca ataaagaacg ccactttgtt ttccggcttg cgactatctt
      901 cagaagcccg caagctatca cgcaggtatt cattatccgc cacggcggtg cgtaatgccc
      961 cgagagcttt atccgaaatc gaacgtaatt cttcagccga ttgataagcc aattcacggc
     1021 gatttaaacg tttttccaca tcgctgttac gagataaacg ttgcacaata caccagctgg
     1081 cttttgcctg caccaccaat tcacgttgtg tatgataatc acgttcggct ttacgtaagg
     1141 tgcggttaag gttatccatt tccgcctcga tcaccgcaat ttgtttatct aaataacctt
     1201 tgcgggaacg ttgctggctt aaacgttgtt gcaattcatc acggcggaat ctggctcgct
     1261 cttccgctcc gctatcacca cgcacgccca aatcgtcaat ttcacgaatt aactcttgta
     1321 gcatttggtt tttcgcctca taagaactgc gtaagccggt caatacttgg ttatattgtg
     1381 aaagttgagc ttgagcttga cgcagctgat cacgagcctg ttcacgctca cgttgtgcat
     1441 tttccaaacg ttggcgtagc tgttcggtta atgcagagcc ttctgtaccc accgtttctt
     1501 gatagctaaa atggaggcgg cgattcatta catcagccaa gctgaacact ttttgctgta
     1561 acactttttg ctcggcaact gaacggcggt aatcggcttc caactgttca aataaagccg
     1621 gatcactttt taatgcggct gcaatcggct caagttggct taatgttgct ccaaattggc
     1681 ggataaacat ttcatcttct tctgccaatt ctaattgctc acgacattcc tccgctcgtg
     1741 cttccagcgt ttcatcggct aataaattcg caagcggtag aattttattc aacatttgca
     1801 actgggcttt tacgctttct aattggtgac gtaattgctg ttcgttaccg gctgattgtg
     1861 ccaattcacg ttcaatttct gcccgttctg ccgcaatctc ttgcattaac atttcagggt
     1921 tttcttggaa cgctaaattt aagtgcgtgc cgataaattg gcttaagtgt tgatgtaaac
     1981 gctggcattt ctgcacatca aaggcacgtt cagcgtgttt ttctgcggtt tcatcacgct
     2041 ctgcttttaa agtcgctaaa tgtttttcac gagcagcacg tccgaataac ggcacttcag
     2101 ggaatttaga ataacgccat tggcgatcgg agactttcac caccacgcct tcgcctaatt
     2161 cctcggcact aaataccgca tcgtcaaagg cggacggatc accttcaatt aaataaagat
     2221 cacttgggca atcgtctaat ttctctagct gtgttttaac cgcctctaaa tcacgcacta
     2281 caatagcgtg gcgagcctcg ccgtataagg cggagaaata aggcgcatct tcaattgata
     2341 catcatcata taactcagag agtaacactc caccaaaacg ttctgccaac tggtttaagc
     2401 gggcgtcttc cgagccgtcc ggctggctta agcgattaat ttgctcatca agcatttgtt
     2461 ctttacgagc caattcatca cgagcaaggg tggcttcacg ctctttgctc agcatatttt
     2521 gcataaactg catcactgat tggctggctt caaacttctc gccacattgc tcttctaaac
     2581 gagtcagagc cgattgtgcc gtatgccaag ccggtgcatt cttcgctaat tgctgatatt
     2641 gttgattaag ctgttcacgt tgttggcgtt gggttgaacg ttgttctaca aagtccgaaa
     2701 gctctgcctc taaatcttct aggcgagctt gctgctcttc aaaataggcg tctaattctt
     2761 ccgctgaatt gagttgttgt tgcgattttt ggttaaattc cgccactaaa cgctgggcat
     2821 tttgctgttg ttgcaaacgc tgttctaaat cgttgagttt ttgacgtaaa ctcaccgctt
     2881 gctgagcttg cattttttgc tcagggaagg cagaaagtaa cgcacgagcc tcttcccacg
     2941 cttgcaagcg gtcaatttca ccggaaattt tgcaaaccaa ttcaaacgct ttttcaaatt
     3001 gggttttcgc catatccgac acgcttaaac gttgttccag ctcaaatact tgatcggtaa
     3061 gatcttcggc ttgagccaca aattctgcgt ggtaatcttc aatattattt aaatctaaat
     3121 tcactaagcc ggttagctgt ttggcttttt ctaacgcatt caccgcttgt tggtattgca
     3181 atgcacgagt ttgctgtgca tctaaggctt gttggtaatc cgccatttga gaacgcaatt
     3241 cttcaacgtg atcatctgcc tcatccgcac gagcctgagc attttcggca atttccgcaa
     3301 tttcttccaa tgcctcttgc tgttcttcca gcttaatatt cagctcttca acttcgtctt
     3361 ggtagcgttc gattttctct tggtggcgta acgcattcat cactaaattt agatgatcgt
     3421 tcgcactatt gtaatccgcc tctaacgcca gctctgcttc ggcaatatcc gcactttcac
     3481 ggctaaattc cacaaagcgt tgctgttcga gcaaaatttt ggattttgcc gcataccact
     3541 ctttgcgttg ctctaaggct tgttgtacat tgccacggcg ttcattcgca ttacgcatat
     3601 aatccgccga cacataattg gtcgattcgg taattaagcg tttgaacata tcccgatccg
     3661 attgcgtgac cttaatcgcc tctaaggtca tacggttttc acgcagagcg gattccatat
     3721 cttggaacgc ttggcgaacg cccgtatttt ccggcaacaa gtaatcacgc aaggatttgg
     3781 taatcacact tgaaatacca ccataaagcg aggcttcgat taatttgtag aatttgctac
     3841 ggtcggctgc cgaacgaagg cgttttggga ttacgcccaa atcgaacata aaactgtggt
     3901 aatcagtaat cgaatggtac tgtttgaatt ggacttcgct gttctcaaat tgatctttga
     3961 gttcatttaa cgccagcact cgagccttat tccccacttg ttcggtcagt aggctgataa
     4021 tgctttgctc ttgaggaata ttctggagcg agaacgaacg aatatcgact tttttatccc
     4081 gtccgacaat ttgttgcaaa cgcacgccgg taataatccg ttgcccacgg gaattgaatg
     4141 actctaacac cgcatagcaa acacccgctt ttaacttacc gtataagcct ttatcacgag
     4201 aaccggcggt tgagcctgct tcagtcgtat tacggaaatt aagcaaggtt aaatctggga
     4261 tcaaggcggt cacaaaccct gccattgtgg tggacttacc tgccccgtta ccgcctgaaa
     4321 gcgtggtcac taagtcatct aaatcaaagg ttcgagcaaa aaaaccgttc cagttaatca
     4381 gcgttaaaga gagaaattta ccgcgttgta catcattcgg gcgtgcaagc ggtgcaattt
     4441 gaggattatt ttgcaattct gtggtatcaa tcattatgtt ttctcactaa ttgtcctagc
     4501 acgctaaagc gtactaggtt aggtataggt gagtagctcc gctactctaa tcgcaacctc
     4561 agccttggag ggctgcttta tgcttaacct agttcggctt taccgtgtct agggcagact
     4621 cattaaatgc tgaatctatt cgaatgaaat cactcatttt ctccgtcaaa gggggcttca
     4681 tctgcaatat tttcatctat ttcaaccgct tgttcgttta acaacgcagg ggttgtcgct
     4741 tcaccatcac gaattaagcg aagctgtgcc tctcttgggt catcaccggt acgcacatca
     4801 gccccaaaac ggaagaccga ttctgaaatc acaaattttt tgctgttttg ctcgcctact
     4861 cgggtaataa tgccgatacg ggctaatctg cgtaacgctc cgccggcttt ttctgccagc
     4921 ttggcacggt ctaaatcgga accggtcgaa cgtgggttta ccgcttttaa taatttgctt
     4981 tcatcggcaa gactgagtaa ttcttcatac acatcatctt ggctgaaaat cccctgctga
     5041 gccaaacgtt ccggacttaa atagaggtag cacaacacct tacccactaa catttccatt
     5101 tctgacattg ccgaacgggc aattagtgtc gaggctttcg ggcgtaggta gaaaaagcct
     5161 tccggtgctc gaatcaactc aacgtgataa cggcggtaaa aactctctag ttccgcttga
     5221 aaatccatca aaaagacgtg ttggtcaagc tgctcggtat tgatatggcg accggctcgt
     5281 aattggctgt ctagctccgg aaaaatcggg ttggcaatcg caagtgccag tttcggggaa
     5341 atgaaatctt ggatattctc tgtcattgtc attctcttca attttgcaaa attctgggta
     5401 aaaacgaccg cttgttattt attgtattgg tcgataacat tcgcctgcac ttccgcccct
     5461 tgctcgttaa tcggctgcca ttgtgggtaa acggcttggc tatcttggct tgccatacct
     5521 aacttaacag cttgatcgac aataatacga gccacgtcaa aatggcggga ttccgggaat
     5581 cgggcaagct gttcacgcaa gataacgcct aaatctatcg gtttaccttc agcacggaac
     5641 ggcgctaaat gagcttgcat tgccgaaaca atttgctctt gcacatctga aagcgactca
     5701 tactctaact cacttggcaa ctcgcccacc gattctgcct catttaacat tgcttcatca
     5761 tcacgcaagt ccagtaacga atcggctttt gcagtataaa gcaaccaagg gctgttgtaa
     5821 taatcttgaa tcgattggcg taaccgttgc ccgaatacac ggtttttgtc catatcaatc
     5881 gctgtacgaa taaatttatg cacatggcgg tcatagccga tccaaagatc gatagcttgt
     5941 tgtccccagc tgataatacg gtctaactta ttttgtagat tcacaatcag ctgatcgata
     6001 aaatccaaat cattacgagc catcaggcaa ctttgaatcc gcaataattg agcttgcagt
     6061 ttatcaccag cggcatttaa ggtatcttgc aactcacgca aattccccga ggtttcgtct
     6121 aacaattgct cacaactcat aattgcttcg tgccagtttt ggctaagcag ttcggctatt
     6181 cgttcacgga tttggtgctg attttcgtcc ataatccgtt gtgaaagatc gatgctgtca
     6241 aagatttccg ccaccgaata tttcaatggg gcaaacacat tatttcgcca aaaacgttca
     6301 tcttgtgcct gctctattcc ctcttccgct gctactgaag ctcgctgaat ttcatctgcc
     6361 acaatcgaaa gttgaatcga taaacgcagg gtagaaaatt cccgctggcg aacgtaataa
     6421 tttgaaattc ccacccctaa cggcgtaaca cgataaatcg ccaaaccttc cgtaaattcg
     6481 ctactaaaac ggtttaacaa ccgttgtctg actaaatcat taatcgcatt attggcacgc
     6541 tgggtaaaag tggcatcaga ttgctcaaac gaatttgaaa cataacggaa aagatcaata
     6601 agatcacttt ctaacaattc accatctgtc tgttcttggt tataaataga gatagcaagt
     6661 agaaacgcta agcggtcgga agaaagcgaa agtgaaaatt cacgatcttt cgtccaagag
     6721 atgagttctg gaatagtctg tgccaattcg ttctgcatac gggcttaatc tttaatttct
     6781 atacaaaaat ggtatttatt gtaactgaat gtaatcaaaa tgggaatgga taaaacgcag
     6841 acaagagaaa tgaacaatat aagcggtcaa atatgggtga ttttttgcaa aaagtatttt
     6901 aaaggtaaat gaatccgaaa atttattatc actacgctaa tttatgatac cataaataga
     6961 aaagactgga tccaatagaa tatcagacac agccccttag atcatagtct aaactctaag
     7021 gcttagagtg atttagctaa ctctttaata aatgctttaa attcttttcc gcatttgtca
     7081 tgatttaaac tatattctac aaatgctttc atatagccga ctttataacc acaatcaaat
     7141 gagcgccctg tcatatgaaa agcttcaacc gtttcttggt gaatcaacat atcaattgca
     7201 tccgtcagct ggatttcatc acctacgcct actggcgttt tttctaataa attccaaata
     7261 tttgaggaaa atacataacg tcctactacc gctaaattag aaggcgcctc ttcaatactt
     7321 ggtttttcaa ccattttcgc aataggcgct gcccccccga gagggatatc tacaccatgg
     7381 cagtcagcaa ccccatagct acttacattt tccattggaa ccggcgcaac cataatttgg
     7441 ctatatccgg tttcttggaa acgcttcacc atcgcagcta aattttccgt tttttggttt
     7501 gctgtaaatt caccaagtaa tacatctggt aatacaaccg caaacggttc atcgccaacc
     7561 actgttcgtc cacatagaac cgcatgacct aaacctttgg cttgcccttg gcgaacgtga
     7621 attaaggtaa catcttttgg tacaatagaa cgtacatcat ctaataattg acgttttact
     7681 cgtttctcca gcatcgtttc caattcaaaa gaggtatcaa aatggttttc gatagcattc
     7741 tttgaagagt gagtaaccaa tacaatttct ttaaaacctg cagccacaca ttcatttaca
     7801 atgtattgaa taagaggttt atctgcaagg ataagcattt cttttggaat agctttggtt
     7861 gcgggtaaca tgcgcgttcc caatccagca acaggaataa tgactttcat ttggaatcct
     7921 ttgatgactt aacatattag atataactga aataaaccgc ttagacataa caggcggtca
     7981 attttcagaa aattttgcat tgcctgcttc gctgttatca tctagcagct ttacagttaa
     8041 aatgcttatt ccgcattttc ctcttctact gaggctttta ttctttcata aatctctcgg
     8101 cggtgtacag agatttcttt tggtgcattc acacctaatt taacttgatt tcctcggatg
     8161 ctgagtaccg taatctcaac atcatctcct acgagtaaaa cttccccaat cttacgagtt
     8221 agaataagca taattgtctc ctaaaaa
//
LOCUS       DANLTI010000117         8212 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.117, whole genome shotgun sequence.
ACCESSION   DANLTI010000117 DANLTI010000000
VERSION     DANLTI010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8212)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8212)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8212
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.117"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            112..2043
                     /locus_tag="PXB09_002144"
     CDS             112..2043
                     /locus_tag="PXB09_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5234218.1"
                     /translation="MIFFTDLILKRGHSVLIDNSSVTIHTGQKVGLVGKNGCGKSSLF
                     ALLKNELQPEGGDVSLPKNWAISWVNQETPALAISALDYVIQGDREYTHLMAELDIAN
                     EKNDGNRIAIIHTQLDTIDAWTIQSRAATLLNGLGFSTEQLQLPVKSFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLERWLSNYRGTLLLISHDRDFLDPIIDRVIH
                     IEHQKLNEYTGNYTSFEIQRATKIAQQNAAYQQQQRKVAHLQSFIDRFKAKATKAKQA
                     QSRIKALEKMELIAPAYADSPFEFEFRPPLALPSPLLMMEKVSAGYAEKTVLESVKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELPPQNGSIQLAKGVQLGYFAQHQVDTLRFDE
                     SPLWHLQKLAPEKTEQELRNYLGGFDFKGDKVVQAVKSFSGGEKARLVLALIVWQRPN
                     LLLLDESTNHLDLEMRQALVDALTYYEGSLVVVSHDRHLLRSTVNEFYLVHDRKVEKF
                     KGDLDDYQKWLNEQNALANEPKSVLAKDSANSTACSSTNENSAAQRKEQKRLEAERRQ
                     QTAPLRKKITQLEKELEKATEKLNKLEAMLTESDIYEAENKAKLTETLAKQLEAKRLV
                     EEIEMQWLEAQEEFETMLR"
     gene            2322..2579
                     /locus_tag="PXB09_002145"
     CDS             2322..2579
                     /locus_tag="PXB09_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5234219.1"
                     /translation="MKNLRLSIHSSEHIWLRELFLKRRLELGLTQRTLGEKMGVLYSF
                     IGKVETGDRRLDIFEFIAYCKGLDLDPLSVLQEIEQQFPHK"
     gene            complement(2626..3246)
                     /locus_tag="PXB09_002146"
     CDS             complement(2626..3246)
                     /locus_tag="PXB09_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDL5234220.1"
                     /translation="MKLWYSTTSPFARKALAVIKHHQLDDKVEMLRVTKAMDPNSPHN
                     QDNPLGRIPALQRNCGRWLFGSLLISEYLDQKGNNTPLLPKEGKPRWAVLALHNLADG
                     IMENTMPTLLQERMARPENEWWVSRHEQLMERNIRSFRQLEEALQEFGTELNLGTLTA
                     VALIDWWAFRLDKIGYDLAKNYPNLTAWAEEMNNKYAILAETKPSM"
     gene            complement(3248..3901)
                     /locus_tag="PXB09_002147"
     CDS             complement(3248..3901)
                     /locus_tag="PXB09_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HDL5234221.1"
                     /translation="MTPTLPICYQHRDFIIINKPEGLSVHKDEAEIGLTELVARQLNV
                     KQVWLVHRLDKITSGLLILALNKEAAARFYHLFEQHKIYKTYWALSDKKPKKKQGRIV
                     GDMQKSRNGAWKLCHSKENPAVTQFISHSVEDSLRHFILQPKTGKTHQLRVAMKSLGS
                     PILGDKLYSGSQADRVYLHAYQLDFEYENEKISVQALPTSGHFWQKICKSNHIKHGE"
     gene            3950..4609
                     /locus_tag="PXB09_002148"
     CDS             3950..4609
                     /locus_tag="PXB09_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDL5234222.1"
                     /translation="MAVTIYLVRHGRTVWNLEGRLQGSGDSALVEEGIIGAKKTGIAL
                     KHIPFTAAYSSMQKRAQDTANYILAENERSNIPHFHHKGLNEFDFGSWEGMKSVDLQE
                     NDEYWVMKRTPAEYLAKANGGERFEQLYQRVTQAFNQIAELHQNDGKVLIVSHGMTLT
                     LLTAVLKGIAWQDFRNEEKHSFVFNTAITKVEVENGKVTVLEFNNTDHLDNVPTSQYK
                     R"
     gene            complement(4646..5692)
                     /locus_tag="PXB09_002149"
     CDS             complement(4646..5692)
                     /locus_tag="PXB09_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDL5234223.1"
                     /translation="MSKQIFNEEELKTTEHFEPKQEFDLENAIIEEEEKAVEAELIIE
                     ESLKPSRFWIRVLLATLALFGVAVIAQSIQWLIDTFQQREWIYFAFSIVFFIVSLLGV
                     GAIISEWRKLVYLRNHQKNQQMSNQLLLEQLPSNDGEQAVKFCENIANQLNHLPSIAQ
                     AEQLWKSELNEAYNAKEVLYLFSENVLKPIDKQVKQMISRNAAENAVIVAVSPLAIVD
                     VLLMAARNIALVNKITKAYGMELGYISRLKLFKMVLKNMVFAGATEIATDVGMDFFSQ
                     NLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQANEKPRISAIRQELLTSVKNT
                     VFAKTETKEKVFSD"
     gene            complement(5692..6645)
                     /gene="dusC"
                     /locus_tag="PXB09_002150"
     CDS             complement(5692..6645)
                     /gene="dusC"
                     /locus_tag="PXB09_002150"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDL5234224.1"
                     /translation="MNPIPNVILAPMQGVLDPFVRNLLTSVNDYDLCISEFVRVVDQR
                     LPKKTFYRLAPELYQGGLTDSGTPVRVQLLGQHPQWLAENAALAIELGSHGVDLNCGC
                     PSKTVNGSNGGASLLKDPELIYRATKAMREAVPSDKIVSVKVRLGWDSVSQCFEIADA
                     VEQGGANEITVHGRTKVDGYRAERINWQAIGEIQQRLSIPVIANGEIWDFESAKNCQK
                     ITACKALMMGRGALNTPNLSKVVKYNVPKMAWNEVLQLLFKYVQMENQFDTGFYHVAR
                     IKQWLRYLDKEYPQAVELFDILKTEHGYDGLKAHIEKAVEE"
     gene            complement(6723..7349)
                     /locus_tag="PXB09_002151"
     CDS             complement(6723..7349)
                     /locus_tag="PXB09_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDL5234225.1"
                     /translation="MDSRSHIIPLFLAIVITVIAVWSGLNPTDRAVWYAEVIPIFIVF
                     ALLIITYPKFQFSGLAYFLMSLWLIMHLIGAKYTFANVPFEWANQFLTPILGEDRNHF
                     DRVAHYIIGFYSFPMAEWLLRKRKCGMGVAFFFSLFFIMSVAAAYEIIEWQYAVIEGG
                     NAGVEFLGSQGDIWDAQKDMLADTLGALTALMIYLIARPDLRIHDRHF"
     gene            complement(7349..8206)
                     /gene="djlA"
                     /locus_tag="PXB09_002152"
     CDS             complement(7349..8206)
                     /gene="djlA"
                     /locus_tag="PXB09_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDL5234226.1"
                     /translation="MQFIGKIVGFFLGYQLFHGLFGGILGAFIGHLADKKLYELGSVR
                     SSLFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEADIELARALMARLKLDSAAQQLAQ
                     NAFTLGKEPDFPLRQVIQEFREACGARTDLLRFFVEVQMQAALQDGQLDVNEQQILFT
                     IAETMGMSRFQFEQMIAMIMAAQQFRNGGYYQQNGSYHQQSQGGYQGSYQQPAQPSIE
                     AAYTVLGVTAQDDQNTVKRAYRKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYD
                     LICKVKEWK"
BASE COUNT         2426 a         1805 c         1648 g         2333 t
ORIGIN      
        1 tcaacacaga atattgaatt aaactgaatt tcttatttta gttcacaaag caatggcttt
       61 gcttttttat gctaaaatac gcaaaatttt taacaaaata gaccgcttgc aatgatcttt
      121 tttacagact taattttaaa acgagggcat tccgttctca ttgataacag ctccgttacc
      181 attcacaccg ggcagaaagt cggtttggtg ggaaaaaacg gctgtggcaa atcctctctt
      241 tttgccttac tgaaaaatga attacaacct gaaggtggcg atgtatcgtt gccgaaaaac
      301 tgggcgatct cgtgggtaaa tcaagaaacg cctgcgttag ctatttcagc gttagactat
      361 gtgattcaag gagatcggga atatacccat cttatggctg agctagatat cgcaaatgaa
      421 aagaatgacg gcaaccgcat tgcgattatc catactcaac ttgataccat tgatgcttgg
      481 acaattcaat cccgtgccgc taccctgctt aacggcttgg ggtttagcac cgaacaactg
      541 caactgccgg tgaaatcctt ctccggtggc tggcgtatgc ggttaaattt ggcacaagct
      601 ctgatttgtc gttccgatct gttattgctt gacgagccaa ccaaccactt agacttagat
      661 gcggttattt ggttggagcg ttggctgagt aactatcgtg gcactttatt gttaatttcg
      721 cacgaccgtg attttctcga tccgattatc gatcgggtga ttcatattga acatcaaaag
      781 ctcaatgaat acaccggcaa ttacacctcg tttgagattc aacgtgcgac caaaatcgcc
      841 cagcagaatg ccgcttatca gcaacagcaa cgtaaagttg ctcatttgca gagttttatc
      901 gatcgcttta aagccaaagc gactaaagcg aaacaggcac aaagccgaat taaagcgttg
      961 gaaaaaatgg agcttattgc cccagcctat gctgattcgc cgtttgaatt tgaatttcgc
     1021 ccaccgcttg cactgcctag cccgttatta atgatggaaa aagtcagtgc cggctatgcg
     1081 gaaaaaacgg tgttggaatc ggtcaaactg aatttggttc ccggctctcg tattggttta
     1141 ctcgggagaa acggtgcagg gaaatccacg ctgattaaat tattggcggg cgaacttccg
     1201 ccccaaaacg gctcaattca actggcaaaa ggcgtgcaac tcggctattt cgcccaacat
     1261 caggtggata cactacgttt tgatgaaagc ccactttggc atttacaaaa actcgcaccg
     1321 gaaaaaaccg agcaggaatt acgcaattat ttaggcggtt tcgattttaa aggcgataaa
     1381 gtggtacaag ctgtgaaatc attctccggc ggagaaaagg cccgtttagt gcttgcctta
     1441 attgtatggc aacgcccgaa tttactgcta ttagatgagt caaccaacca tttagattta
     1501 gaaatgcgac aagccctggt tgatgcactg acctattacg aaggctcgct agtggtggtt
     1561 tcgcacgacc gccatttatt gcgtagcacc gtgaatgaat tttatttagt gcacgaccgc
     1621 aaagtggaaa aatttaaagg tgatttagac gattaccaaa aatggctcaa tgagcaaaac
     1681 gccttagcca acgagccgaa atccgtactt gcaaaagatt cggcaaattc gaccgcttgc
     1741 tctagcacca atgaaaatag tgcagctcaa cgcaaagagc aaaaacgctt agaggcagag
     1801 cgccgccaac aaaccgcccc attgcggaaa aaaattactc aactggaaaa agagttagaa
     1861 aaagcaaccg aaaaattaaa taaactcgaa gcaatgctta ccgaaagcga catttatgaa
     1921 gccgaaaata aagcaaaact aactgaaaca cttgcgaaac agttagaggc aaaaaggctg
     1981 gttgaagaaa ttgaaatgca atggttggag gctcaggagg agtttgagac catgttacgc
     2041 tagggttcta caagatagcg caagcgtcca cgcttgtgcc atttaaggga actatacacc
     2101 tcaaaaaaac aatgatcatt aagctagctt ttttataaat ttaaaaacct atagattaaa
     2161 taaataatga tattaatagt aaaatcacga gtgcaactac actgacgata ataaaatcag
     2221 gcatacttat tctccctata aaatgtggta atgtaactac aaattaatta tataatgaac
     2281 ctaaaaaagg ttcaacatta tttgtaccta atataggtgc aatgaaaaat cttagattat
     2341 caatacattc cagcgagcat atttggttaa gagaactatt cttaaaacgc cgtttggaac
     2401 tagggctaac acaacgcaca ttaggagaaa aaatgggcgt tctttactca tttatcggaa
     2461 aagtagaaac aggagatcgc agattagata tttttgaatt tatcgcttat tgcaaagggt
     2521 tagatttaga tcctttatct gtattgcaag aaattgaaca acaatttcct cataaataaa
     2581 ggcattgagt tataactcaa tgcctttatt ttctatgtca aatctctaca tgctcggctt
     2641 agtctctgcc agaatggcgt atttattatt catttcctct gcccaagcgg ttaaatttgg
     2701 gtaatttttt gcaagatcgt agcctatctt atctaagcgg aatgcccacc agtcaattaa
     2761 tgctactgcg gttaatgtgc ctaaattcag ctctgtgcca aactcttgca atgcctcttc
     2821 taattgtctg aacgaacgga tattgcgttc cattaattgc tcgtggcggc tgacccacca
     2881 ttcattctcg gggcgagcca tacgttcttg taataaagtt ggcatcgtat tttccataat
     2941 gccgtccgcc aaattatgta atgccaacac tgcccagcga ggtttaccct ctttaggtaa
     3001 cagtggagtg ttattgcctt tttggtcaag atattcgcta attaacaaac taccgaaaag
     3061 ccaacgtccg cagttgcgtt gtagggcagg aatacgtcct aacgggttat cttgattatg
     3121 tggcgaattt ggatccattg cttttgtcac ccgcaacatt tcgactttat cgtctaattg
     3181 gtggtgttta atcaccgcaa gggctttgcg ggcgaaaggg ctggtggttg agtaccaaag
     3241 tttcatacta ttctccgtgt ttgatgtgat tggatttgca aattttttgc caaaaatgac
     3301 cgcttgtcgg caaggcttgc actgagattt tctcattttc gtattcaaaa tcaagctgat
     3361 aagcgtgcaa ataaacacgg tcggcttggc tacctgaata gagtttatca cctaaaatcg
     3421 ggctgcccaa acttttcatt gccactctta attggtgagt tttgcctgtt ttgggttgca
     3481 aaataaaatg cctgagcgag tcttcaacag aatgagaaat aaattgcgtt actgccgggt
     3541 tttccttact gtggcataat ttccacgctc catttctgct tttttgcata tcgccaacaa
     3601 ttctaccctg ctttttcttc ggctttttat cgcttaatgc ccaataggtt ttgtagattt
     3661 tatgctgttc aaataaatgg taaaaccttg ctgccgcctc tttattcaac gctaaaatca
     3721 gtaaacctga ggtgatttta tccagacggt gaaccagcca aacctgcttt acattcagtt
     3781 ggcgagccac taattccgtt aagccgattt cagcctcatc tttatgcaca ctcaagcctt
     3841 ccggcttatt gataataata aaatcacgat gttgataaca aataggcaat gttggggtca
     3901 ttttgctata atccttccaa tttttgacta ttttagcaag gaaattacaa tggctgttac
     3961 catttattta gtacgacacg gcagaaccgt gtggaatttg gaaggcagat tacaaggctc
     4021 gggcgattcc gctttagtag aagaagggat tatcggagcg aagaaaaccg gcattgcgtt
     4081 aaaacatatt ccgtttaccg ccgcctattc cagtatgcag aaacgggctc aagataccgc
     4141 aaactacatt ttagcagaaa atgaacgcag taatattccg cattttcatc ataaaggctt
     4201 gaatgaattt gattttggca gctgggaagg aatgaaatct gtcgatttgc aagaaaatga
     4261 tgaatattgg gtgatgaaac gtacaccggc agaatatctg gcaaaagcaa acggtggcga
     4321 gcgatttgag caactttatc aacgggtgac tcaggcgttc aatcaaatcg ccgagctaca
     4381 ccaaaatgac ggcaaagtgc tgattgtttc acatggtatg accttaacct tactcacggc
     4441 tgtgttaaaa ggcattgcgt ggcaagattt ccgcaatgaa gaaaaacata gctttgtgtt
     4501 caatactgcc attacgaaag tagaagtaga gaatggcaaa gtaacggtgc tggaatttaa
     4561 taataccgac catttggata atgtgccaac aagccaatac aaacgataat attaagggcg
     4621 gaacattgtc cgcccatagc attttctaat cagagaacac tttttctttc gtttctgttt
     4681 tagcaaatac cgtatttttg accgaagtaa gcaactcctg acgaatagct gaaattcttg
     4741 gcttctcatt cgcttgaaaa gcaacaggac gacaaaattc cattgcttta atgccaaggc
     4801 gagcagtgag taaacccaca ccaatacctt gtgcggcacg gagcgataat ttcgccgtaa
     4861 ggttttgcga gaagaaatcc attccaacat cagtagcgat ttcggttgca ccggcgaaca
     4921 ccatattttt cagcaccatt ttgaacagtt ttaagcggct gatataaccc aattccattc
     4981 cataggcttt ggtaatttta ttcactaaag cgatatttct tgccgccatt aacaacacat
     5041 caactattgc cagcgggcta accgccacaa tcaccgcatt ttctgccgca ttgcgggaaa
     5101 tcatctgctt aacctgttta tctatcggct ttagcacatt ttcgctaaac agatatagta
     5161 cctctttggc attataagcc tcgttcagtt cgcttttcca aagttgctcg gcttgagcaa
     5221 tgctcggcaa gtgattaagc tgatttgcaa tattttcgca aaatttgacc gcttgttcgc
     5281 catcattgga aggcagctgt tccagcaata attggttact catttgttga tttttctgat
     5341 gatttcgcaa atacaccaac tttcgccatt cggaaataat cgccccaacg cccaacaagc
     5401 tgacaataaa aaagactatc gagaacgcaa aatagatcca ctctctttgc tggaacgtat
     5461 caatcaacca ctgaatactt tgagcaatta ccgccacgcc aaacaaggca agtgtggcaa
     5521 gtagtactcg aatccaaaag cgggaaggct taaggctttc ttcaataatc agctccgcct
     5581 caactgcttt ttcctcttct tcaataatcg cattttcgag atcaaactct tgtttaggtt
     5641 caaaatgctc ggttgttttt agctcttctt cattaaaaat ttgcttactc attattcctc
     5701 cactgccttt tcaatatgtg cttttagacc atcatagccg tgttcggttt tcaagatatc
     5761 aaataattct accgcttgag gatattcttt atccaaataa cgtagccatt gtttgatgcg
     5821 agcaacgtgg taaaaaccgg tatcaaactg attttccatc tgaacgtact taaacaatag
     5881 ctgtagcact tcattccacg ccattttcgg aacattatat ttcaccactt tgcttaaatt
     5941 cggtgtgttt aacgccccac gccccatcat taatgccttg caagcggtta ttttttggca
     6001 atttttcgcc gattcaaaat cccaaatttc gccgttggcg ataacaggaa tagacagccg
     6061 ttgttgaatt tcgccaatcg cctgccaatt aattctttct gctcgataac catcaacttt
     6121 ggttcgcccg tgaacggtaa tttcattcgc tccgccctgt tctaccgcat cggcaatttc
     6181 aaaacattgg ctaacggaat cccaacctaa tcgcactttt acggaaacga ttttatcgct
     6241 tggcacagct tcacgcatcg ctttggttgc acgataaatc agttccggat cttttaataa
     6301 cgaagcccca ccattgctgc catttaccgt tttagagggg cagccacagt tgagatctac
     6361 cccgtgtgaa ccaagctcaa tggcaagagc tgcattttct gccagccact gtgggtgttg
     6421 ccctaaaagc tgtacccgca ctggtgtgcc ggaatcggtt aatccgcctt gatatagctc
     6481 aggggctagg cgataaaagg ttttcttcgg taaacgttga tcgaccactc gcacaaattc
     6541 ggaaatacag agatcgtagt cattcactga agttaaaagg ttgcggacaa aagggtctaa
     6601 aaccccttgc atcggggcaa gaataacgtt aggaattgga ttcattggta aaataaaaaa
     6661 tacaagcggt tattttttct caacattttg caaaaaattg gcaagaaaca accgcttgaa
     6721 ggttaaaaat gtctatcgtg aatgcgcaaa tcggggcgag cgatcaggta aatcatcagt
     6781 gcggttaatg ccccaagagt atccgcaagc atatcttttt gagcgtccca aatatcccct
     6841 tgcgagccta gaaattccac gccggcattg ccaccttcaa tcacggcata ttgccattca
     6901 ataatttcgt aagctgccgc caccgacata atgaaaaaca gcgagaagaa aaatgctacg
     6961 cccattccgc acttgcgttt acgcagtaac cattctgcca tcgggaagct gtaaaaaccg
     7021 ataatgtaat gtgctactcg atcaaaatgg ttacgatctt cacctaaaat cggggttaga
     7081 aattgatttg cccactcaaa cggcacattg gcaaaggtat attttgcccc gatcaagtgc
     7141 ataatcagcc aaagcgacat caaaaaataa gctaacccac taaactgaaa tttagggtaa
     7201 gtgataatta aaagggcaaa aacgataaaa atcggtatca cttccgcata ccaaactgcg
     7261 cggtctgtcg gatttaaccc tgaccaaacc gcaatcacgg taataacaat cgctaaaaat
     7321 agagggatga tatgcgagcg tgaatccatt atttccactc tttcacttta caaattaaat
     7381 cgtacgccgc ttgaatttgt tgagctttct cttttgccaa ctccatcatc tcatcaggca
     7441 aacctttagc ggctaattta tccgggtgat gttcgttcat taacttacga taagcccgtt
     7501 tcactgtatt ttgatcgtct tgtgcggtta cgcctaatac ggtataggct gcctcaatgc
     7561 ttggttgtgc aggctgctga taactgccct gatagccacc ttgagattgc tgatgataac
     7621 tcccattttg ctgataatag ccaccattgc ggaattgttg agctgccata atcattgcga
     7681 tcatctgctc aaattggaag cgagacattc ccattgtttc ggcaatcgta aacagaattt
     7741 gttgctcgtt cacatcaagt tgcccatctt gcaaggctgc ctgcatttgc acttcgacaa
     7801 agaaacgtaa taagtcagtt cttgccccac aggcttctct gaactcttga atgacttggc
     7861 gtaacgggaa gtcaggctct ttacctaagg taaaggcatt ttgcgctaat tgctgggctg
     7921 cactatctaa ttttaagcga gccattaacg ctcgggctaa ttcaatatcc gcttcagtaa
     7981 cacgcccttt tgctttcgca atatgcccca acaccgcaaa agtggtttgg gtgaaaagcg
     8041 attggcgagt taaattttta ccgaaaagac ttgaacgaac tgaacctaat tcatagagtt
     8101 ttttatcggc taaatgcccg ataaaagcgc caagtatccc accaaataaa ccgtgaaaaa
     8161 gctgatagcc caagaaaaaa ccgactattt ttccgataaa ttgcattttt tt
//
LOCUS       DANLTI010000118         8086 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.118, whole genome shotgun sequence.
ACCESSION   DANLTI010000118 DANLTI010000000
VERSION     DANLTI010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8086
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.118"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            61..2409
                     /locus_tag="PXB09_002153"
     CDS             61..2409
                     /locus_tag="PXB09_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5234227.1"
                     /translation="MLISAQFSPLVWAENNDVAVLDEVSVVGSTPSISQGSEVTLLKV
                     SDKIIAGKEFKKRSATLGNALASELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDV
                     IDMSNLSPDHAVVADSLLADQVEILRGSSTLLYASSSPVGIVNVVDKRIPTAIPEKGY
                     EVELNSRFDTAAKEKVGALGATFGIGNHIAVRVEGLSRHSDNYRVPGINLGERLNYVP
                     DTYNKSKVGTLGLSFVGERGYIGASYSKRRDNYGLPGHNHKFDFCTGHIYGNKRDKYA
                     YTYLYPHLIGEENIGSNPHFHCGTNHAEDGTHSHDNPFGHAHDHTHKGPWVDLESKRI
                     DVKAELRQPFKGVDKIKASYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKN
                     RGKNTRLEVYHAPLGGLTGVWGVQYQTQKSSMNAPKDREVKFPLVENTNKQFSLFGVE
                     QYMWDSVAVELAGRMEKQKIEIEYDRNEIKRLQEHYRISGGKQVEPDLSPYDETAYAY
                     SGTLNWFFHPDYQLSFTASHNERLPTPMELYYHGQHIATNSFEYGNKDLKKEQSNNVE
                     LGLGYQAERIGYKVSVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGVEAEASYR
                     FNDQYQATIFGDMVRGWLTNLPPLKINSDYSVFKDYLPENVEKGKDYLLYRADQNTPR
                     TPPMRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEYITEGNTMLNVGLSYSNKWKE
                     LDYKISLNGTNLLNQPVYIHTSYHQFVPQMGRNFMLGMEMKF"
     gene            2766..5036
                     /gene="nrdA"
                     /locus_tag="PXB09_002154"
     CDS             2766..5036
                     /gene="nrdA"
                     /locus_tag="PXB09_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5234228.1"
                     /translation="MNKSLMVTKRNGTREQLNLDKIHRVITWAAEGLENVSVSQVELR
                     SHIQFYEGIRTSDIHETIIKAAADLITKDTPDYQYLAARLAIFHLRKKAYGQFEPPHL
                     YEHVKKLVALGKYDADLLSDYTPEEWETMNGFIDHWRDMTFSYAAVKQLEGKYLVQNR
                     VSGEIYESAQFLYLLVAACLFSKYPTASRLDYIRRFYDATSTFKISLPTPIMAGVRTP
                     TRQFSSCVLIECDDSLDSINATSAAIVKYVSQRAGIGINAGAIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATVYFPIWHLEAESLMVLKNNRGVEENRARHMD
                     YGVQINKMMYQRLIKGGEISLFSPSDVPGLYEAFFADQAKFEQLYLQYEQDPSIRQRK
                     VKAVELFSLLMQERASTGRIYIQNVDHCNTHSPFNPRVAPIRQSNLCLEIALPTKPLA
                     HFYDEQGEIALCTLSAFNLGTLSNLDELEELADLVVRALDALLDYQDYPVLAARNSSL
                     NRRALGVGVINYAYYLAKNQVRYSDGSANNLTHRTFEAIQYYLLKASMNLAKEQGACA
                     YFDQTTYAKGLLPIDTYKKEIDELTQEPLHYDWEQLRQDILQFGLRNSTLTALMPSET
                     SSQISNATNGIEPPRGYISVKASKDGILKQVVPEYERLKAYYELLWDIPNMDGYLHLV
                     GIMQKFVDQAISANTNYDPNRFAEAKVPMKVLLKDLLTAYKYGLKTLYYQNTRDGAED
                     VQDDLDEGCAGGACKI"
     gene            5063..6193
                     /gene="nrdB"
                     /locus_tag="PXB09_002155"
     CDS             5063..6193
                     /gene="nrdB"
                     /locus_tag="PXB09_002155"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5234229.1"
                     /translation="MAYTTFSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQ
                     LSFFWRPEEVDVSQDRIDYAQLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDD
                     LIRDSQLYSLYGEGSYQVDGKTCEVSLRSLKRQLYLCMMSVNALEAIRFYVSFACSFA
                     FAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYEL
                     FLSAAEQEKAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIP
                     WINAWLVSDNVQVAPQEVEVSSYLVGQIDAKVDSRDFGDFEL"
     gene            complement(6274..7044)
                     /locus_tag="PXB09_002156"
     CDS             complement(6274..7044)
                     /locus_tag="PXB09_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDL5234230.1"
                     /translation="MTITNTELEQILNTKLNSSAINDYAPNGLQVEGKREIKKIITGV
                     TATLPLIEKAIEKNADAILVHHGYFWKSENPCIRGMKGKRIKQLLVNDINLFGYHLPL
                     DIHSELGNNAQLAKHLGVKNLQGLEDRPNSIPMYGELENPISANELKQKLEKTLQRTV
                     ILCDEFVHSPQKMIKTIGICSGGGQGYIDLAFEKGCDAFISGEISEQTTHSAREQGIY
                     YFACGHHATERDGVKALGEWLAVEYGLDVEFIDIDNPA"
     gene            complement(7128..7712)
                     /locus_tag="PXB09_002157"
                     /pseudo
     CDS             complement(7128..7712)
                     /locus_tag="PXB09_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
     gene            7815..>8086
                     /locus_tag="PXB09_002158"
     CDS             7815..>8086
                     /locus_tag="PXB09_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234231.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNLKNRVDEAIEQAVVKFALDNPAFGQVRV"
BASE COUNT         2412 a         1519 c         1770 g         2385 t
ORIGIN      
        1 accttattat ccttaatttt tttaaggaga aagattgtgt ttaagaaaac aggattggca
       61 ttgctgattt cggctcaatt tagcccgctt gtttgggcgg aaaataacga tgtagcggtg
      121 ttagatgaag tttcggtcgt tggcagcact ccaagtatat cgcaggggag tgaagttacc
      181 ttgctaaaag tcagtgataa aattattgca ggtaaggaat ttaaaaagcg ttcggcaacg
      241 ctgggtaatg cgttggcgtc agaattaggc gtgcatagta acccgtttgg tggcggagcg
      301 agtaagccga ttattcgtgg gcaggaaggg gcgagaattc gcattttgca aaacggttca
      361 gacgtgattg atatgtcgaa cctatctcct gatcacgccg ttgttgctga ttcactgctt
      421 gccgatcagg tcgaaatctt gcgtggttcc agcaccttgc tttatgccag cagttcgccg
      481 gtaggaattg taaatgtggt ggataaacgt attccgaccg ctattcctga aaagggatat
      541 gaggttgaac tcaatagccg ttttgatacc gccgccaaag agaaagtcgg cgcattaggg
      601 gcaacctttg gcatcggtaa ccacattgcg gtgcgagtcg aagggctgag tcgtcatagt
      661 gataactacc gtgtgccggg gatcaactta ggcgagcgct taaactatgt gccggacact
      721 tacaataaat ccaaagtcgg cacgttgggc ttatcctttg tcggtgaacg aggctatatt
      781 ggtgcctcat acagcaaacg gcgggataat tatggcttgc cggggcataa ccataaattt
      841 gatttctgta ccggtcatat ctacggtaat aagcgggata aatacgctta tacctatctc
      901 tatccgcatt tgattggtga ggaaaatatt gggagcaatc cgcacttcca ctgtggaacc
      961 aaccacgccg aggacggcac acacagccac gataacccgt tcggacacgc ccacgatcac
     1021 actcacaaag gcccgtgggt ggatttagaa tcaaaacgga ttgatgtgaa agccgagcta
     1081 cgccagccgt ttaagggcgt agataaaatt aaggcaagct atgctgatgc cgattattac
     1141 cacgatgaaa aagatgcagg cgtgcttgcc acccgttacc ataaacagct gaaaaaagat
     1201 caggattacg gcaagccggt gaatattttc aaaaatcggg gcaaaaatac ccgcttggag
     1261 gtctatcacg caccgctagg tggcttaacc ggtgtatggg gtgttcagta tcaaacgcaa
     1321 aaaagcagta tgaatgcgcc gaaagatcgc gaagtgaaat tcccgctggt tgaaaatacc
     1381 aataaacagt tcagcctgtt tggggttgag cagtatatgt gggatagcgt tgctgttgag
     1441 cttgccggac gaatggaaaa gcagaagatt gagattgagt atgatcgcaa tgaaatcaaa
     1501 cggttacaag aacactaccg tatcagtggc ggcaaacagg ttgagccaga tctttcaccc
     1561 tatgatgaaa cggcttatgc ctattccggc acgcttaact ggttcttcca ccctgactat
     1621 cagctttcgt ttactgcctc gcacaatgaa cgcttgccaa cgccaatgga gctgtattat
     1681 cacgggcagc atattgctac taattcgttt gaatacggca ataaagactt gaaaaaagag
     1741 cagtcaaata atgtggagtt gggcttgggc tatcaagctg aacgtattgg ctataaagtg
     1801 agtgtttatt acaatcactt taaaaactac atctacaatg aaaatctttt ccgtgaaaat
     1861 cagctattta tgcgccgtta taatcaggca aaagcccgtt tttacggggt agaagcagag
     1921 gcaagctacc gctttaacga ccaataccaa gccacgattt tcggcgatat ggtacgaggc
     1981 tggctaacaa atttaccacc attgaagata aatagcgatt atagtgtgtt caaagattat
     2041 ctgccggaaa atgtggaaaa agggaaagat tatcttctat atcgggctga ccaaaacacc
     2101 cctcgtacac cgccaatgcg tttaggtttt cgctttaatg cggaatttac cccaaattgg
     2161 tcgggggatt tagagctgat ccgcaccttt acccaacgcc gtacgagcca gttggaatat
     2221 attaccgaag gtaatacgat gttgaatgtc gggttgtcgt atagcaataa gtggaaagag
     2281 ctggattaca aaatcagtct aaacggcaca aacttactga atcagccggt gtatatccac
     2341 acttcgtatc accaatttgt accacaaatg ggacgaaatt ttatgttggg aatggagatg
     2401 aaattttaag ttctcgacat aacaagacaa gcggttattt tttcttcaaa ttttgcaaaa
     2461 aaacggctaa aaataaccgc ttgtttaaaa ctcaggtatt ggtaatttgg ataaaatagt
     2521 gctgtttttc ctttcttgtt attttcggag cttaccaaaa tttcctgttt gttgttaaat
     2581 aagacaatta actttatccc tttattaaaa atatggttat ttataaataa cttagcatct
     2641 gtcaagagaa aaagtaaaaa tttattggtt gatgttttgc tttaagcaca ctatcttgtg
     2701 tttactttaa tgaaaaacac aagatgtagt gttttactaa ggtattttat aaagggttaa
     2761 taattatgaa taaaagttta atggtaacaa agcgtaatgg cacgcgcgag caactcaatc
     2821 tagataaaat tcatcgtgtg attacttggg cggcagaagg gttagagaat gtttctgttt
     2881 cacaagtaga actccgttct cacattcaat tttatgaagg tattcgcact tcagatattc
     2941 atgaaactat tatcaaggct gcagctgatc taatcactaa ggatacgcca gattatcaat
     3001 atttagccgc acgcttggcg attttccact tacgcaaaaa agcttatgga caatttgagc
     3061 caccgcattt atatgagcac gttaaaaaat tagttgcgct aggtaaatat gatgcagact
     3121 tgctgagcga ctatacgccc gaagaatggg agacaatgaa tggatttatt gatcactggc
     3181 gggatatgac gttttcctat gcagcagtaa agcagttgga aggaaaatat ttagtgcaga
     3241 atcgtgttag cggagagatt tatgaatcgg ctcaattttt gtatttactc gtagctgcct
     3301 gtttattttc taagtatcca acagcaagcc gcttagatta tattcgccgt ttttatgatg
     3361 cgacttccac tttcaaaatt tctttgccaa caccgattat ggcaggagtg cgtacaccta
     3421 ctcgtcaatt tagttcctgt gtgttaattg agtgtgatga tagcttagat tccatcaatg
     3481 caacctcggc tgcaatcgtt aaatatgttt cacagcgtgc tgggatcggt attaatgccg
     3541 gcgcaattcg ggcattaggt agccccattc gtggtggaga agcatttcat accggctgta
     3601 ttccctttta taaacatttt caaactgcag taaagtcttg ctctcaaggt ggtgttcgcg
     3661 gtggagcggc taccgtgtat tttccgattt ggcatttgga agcagaaagc ttaatggtat
     3721 taaaaaataa ccgtggtgtg gaagaaaacc gtgctcgcca tatggattac ggggtacaga
     3781 ttaataaaat gatgtatcaa cgtttaatta aaggcggtga gattagttta tttagtccat
     3841 cagatgtgcc ggggttatat gaagcgtttt ttgctgatca agctaaattt gagcaacttt
     3901 atttgcaata tgagcaagat ccgagcattc ggcaacgtaa agttaaagct gtagaattgt
     3961 tttcattact gatgcaagag cgggcttcaa cagggcgaat ttatattcag aatgtcgatc
     4021 attgtaatac tcatagccca tttaatcctc gtgtcgcacc gatacgccaa tcgaacctct
     4081 gcttagaaat tgctttgcca actaagccac tggcacattt ttatgatgaa caaggggaaa
     4141 tcgcattatg tacattatcg gcatttaatt taggcacact cagcaattta gatgagttag
     4201 aagaattggc tgatttagtg gttcgtgcgc tagatgccct attagattat caagattatc
     4261 cggtattagc tgcacgtaac agctcattaa atcgtcgcgc attaggtgta ggcgtgatta
     4321 actatgctta ctatttagct aaaaaccaag tgcgttattc cgatggcagt gctaataatt
     4381 taactcaccg tacctttgaa gcgattcagt attatttatt aaaagcatcg atgaatttag
     4441 ccaaagaaca aggggcgtgt gcttattttg atcaaaccac ttatgccaaa gggttactcc
     4501 ctatcgatac ttataaaaaa gaaattgatg aattaactca agaaccgctt cattatgatt
     4561 gggaacaact acgtcaggat attctgcaat ttggcttgcg caattccact ttaactgcct
     4621 taatgccatc ggagacttcg tcgcaaattt cgaatgccac caatggaatt gaacctccgc
     4681 gtggctatat tagtgttaaa gcatcaaaag acggtatttt aaagcaggtt gtgccggagt
     4741 atgaacgttt aaaagcatac tatgaactgc tttgggatat tcctaatatg gacggatatt
     4801 tgcatttggt tgggattatg cagaaatttg ttgaccaagc gatttcggcg aatacaaatt
     4861 acgacccaaa ccgctttgca gaagctaaag taccgatgaa agtattatta aaagatctat
     4921 taacggcgta taaatacggg ttaaaaaccc tttactatca aaatacccgt gatggagcag
     4981 aagatgtgca agacgactta gatgaaggct gtgctggtgg tgcttgtaaa atttaataag
     5041 aacagaaata aaggagaata acatggcata tactacgttt tcacaacata aaaatgatca
     5101 actaaaagaa cccatgtttt ttggacaaaa tgtgaatgtg gcgcgttatg atcaacaaaa
     5161 atacgaaatt tttgaaaaac tgattgaaaa acaactctca tttttctggc gaccggaaga
     5221 agtggatgtg tcacaagacc gcattgacta tgcccaactg cctgaacatg aaaagcacat
     5281 ttttatcagc aatttaaaat accaaacctt gttggattcc attcaagggc gtagcccgaa
     5341 tgtggcgctt ttgccattag tgtctatccc cgagcttgaa acctggattg aaacttggac
     5401 atttagcgaa acaattcaca gtcgttctta cacacatatc atccgtaata ttgtcaatga
     5461 tccatcaata gtatttgatg atattgtcac aaacgaagaa attattaagc gtgccaaaga
     5521 tatttccgcc tattatgatg atttgattcg tgacagccaa ctctatagtt tgtatggtga
     5581 aggcagttat caggttgatg gaaaaacctg tgaggtcagt ttgcgtagtc taaaaagaca
     5641 actttatctc tgtatgatga gtgtgaatgc gcttgaagca attcgttttt atgtctcttt
     5701 tgcttgctca tttgcctttg cggaacggca gcttatggaa ggaaatgcca aaatcatcaa
     5761 atttattgca cgtgatgaag cattacatct taccggcact cagcatatat tgaatattat
     5821 ggcctatggc aatgatgatc ctgaaatggc agaaattgca cgtgaatgtc gccaagaggc
     5881 ctacgagctt tttttaagtg cagctgaaca agaaaaagcg tgggcggaat acctgtttaa
     5941 agacggttcg atgatagggc taaatcggga tattttggtg caatatattg aatatatcac
     6001 taatattcgg atgcaggctg ttggactacc attaccattt aaggcacgtt ccaaccccat
     6061 tccgtggatc aatgcgtggt tggtttccga taatgtacag gtagcaccac aagaagtgga
     6121 agtcagttct tatttggttg gccagattga tgctaaagta gatagccgtg attttggcga
     6181 ttttgaactt tagactatga tatacaagcg gttgattttt agtgattttt tgcaaattgc
     6241 aaaattttca ggaaattcaa ccgcttgtat tttttatgca gggttatcaa tatcaataaa
     6301 ttcaacatct aaaccatatt caacggctaa ccattcacct aaggctttta cgccatctcg
     6361 ttccgtggcg tgatgaccgc aagcaaaata atagattcct tgttcacggg cagagtgagt
     6421 ggtctgttcg gaaatttcgc cactaataaa ggcatcacag cctttttcaa aggctaaatc
     6481 aatatagcct tgtcctccgc cggagcaaat ccctattgtt ttaatcattt tttgtgggct
     6541 atgaacaaat tcatcacata aaataacggt gcgttgtaac gttttttcaa gtttttgttt
     6601 cagttcattg gcggaaatcg gattttctaa ttcaccgtac attggaattg aattaggtct
     6661 gtcttctaaa ccttgtagat tttttactcc taaatgctta gcaagctggg cgttgttacc
     6721 tagttcggag tgaatatcca gtggtaggtg ataaccaaag agattgatgt cattcactaa
     6781 aagctgttta atgcgtttac ctttcattcc tcgaatgcac gggttttcac ttttccaaaa
     6841 ataaccgtgg tggactaaaa ttgcatcggc gtttttctca atcgcttttt caatcagggg
     6901 aagtgtagct gtcacaccgg taataatttt tttgatctct cttttccctt caacttgcaa
     6961 gccatttggg gcatagtcgt taatggcgga gctgttgagt ttggtgttca gaatttgttc
     7021 tagttcagta ttggttattg tcattttatc tccttaaact tggcataata atggatgtag
     7081 gggcaaaaaa ttttttgccc ctacagtgta gcagatagtt atcgcattta ctcttgtgcc
     7141 agagcagtaa ttgggtttaa ttgggcggcg tttcttgccg gaatgtagcc aaataccaca
     7201 ccgataagtg tagagcagag cacggcaata atcaccgatt ccggtgaaag catcatttta
     7261 aaattcgtac ctaaggtatt aaatgcccaa ataatagcgc ttgccagtaa aatgccaatc
     7321 acaccaccta ttaggcaaat aaccaccgcc tcaattaaaa attgttgcaa aatattgcgt
     7381 tgttttgcgc caatcgccat tcggacacca atttctcggg tgcgttcggt gacggaaacg
     7441 agcataatat tcattacccc gataccaccg acaatcagcg aaataagggc gatagaggag
     7501 atcagcaaag tcattgtatt ggtggtactg gtaatggttt gtttgatcgt atcactattc
     7561 ataataaaga aatctttttt gccgtgttta gctactaaca attcggcaat gcttttttcg
     7621 gcagtttggc tttcaatatc atctttaatt ttaaccgtga gtgaatctat ctgttttgca
     7681 cctgaaatgc gttgcataat agtggtataa ggtgtagaag atcagacttg atctgacaat
     7741 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtcaaaaatc aatctaaaca
     7801 aaaaggaaac tctcatgttt tattctaaca accctctcat taaacacaag accggtttat
     7861 taaatttagc agaagaactg ggtaatattt ctcaagcctg caaagtaatg ggaatgagcc
     7921 gagatacatt ctatcgttat caacaagcgg ttgagcaagg tggtgttgaa gcattgctga
     7981 atcaaaatag acgcgttccc aacttaaaaa atcgtgttga tgaggcaata gagcaagctg
     8041 ttgtgaagtt tgctcttgat aacccggcat ttggacaggt aagagt
//
LOCUS       DANLTI010000119         7951 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.119, whole genome shotgun sequence.
ACCESSION   DANLTI010000119 DANLTI010000000
VERSION     DANLTI010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7951
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.119"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            122..4318
                     /locus_tag="PXB09_002159"
     CDS             122..4318
                     /locus_tag="PXB09_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5234232.1"
                     /translation="MKTKTFTRSYLASFVTIVLSLPAVASVVRNDVDYQYFRDFAENK
                     GPFSVGSMNIDIKDNNGQLVGTMLHNLPMVDFSAMVRGGYSTLIAPQYLVSVAHNTGY
                     KNVQFGAAGYNPDSHHYTYKIVDRNDYEKVQGGLHPDYHTPRLNKLVTEVVPAAVTNA
                     GTSIKPYLNEERFPMFLRAGSGTQALRGKESNKTTGIAGAYEYLTGGTTLQLSKSSPD
                     HWLDYSSNLYQVSYGPLSTYALPGDSGSGSYAYDMNEKRWVLVGVLNFYNGMDNQFNR
                     SAIIRKDFHEKKFAEDIAGTINNTVQNAQFNWTAQGKSSSLSQSNNVQKLNVDLKDSS
                     IANQNTSLPQENHGKTINFNGKDATIVLKQDIDQGAGALNLNANLTIRPETDQTWQGA
                     GIIVGKDKKVNWQVKNPQGDRLSKLGEGTLYVNGRGQNLGDISVGDGIVILNQQADHQ
                     GRKQAFNTVGIVSGRPTVVLGSADQVNPDNIYFGFRGGRLDLNGNSIAFKRIQNSDKH
                     ARIVNHNRDHISTLIIQGQDPLTSNDLIWGKWASNSPADIYEYTNPYQNKRKDYFRLK
                     GNSRVYYPTNATSNDHWEFLSSNREQAIQKILDAKNLRQRYDTFNGFIGEDASNKTNG
                     ILNVVFDTKTEVNTEQDKLKNIYTMSGGFNLNGELTLKGGTLLLSGHPTPHAYDIKNK
                     HDVVRENDWQDSHFTAKNITVNKMAQLYIGRNVNEVNSHFTATDKAKLNLGFINRSTP
                     SCYDSEYTGTTHCEVQAVISDNIFANLATTAIKGNVKLQNHSQLNLGKANLTGSVQAD
                     QTTHITLANHSHWLNNGTSQIGHLTMEKGSILSLNDKFATTEIPVRFNKMIIQGNLKG
                     NGRINYTANLAKGESDHLQVDGIAEGNFVLAVRNSTTEANPKSSLNLLSLKNSNQEGN
                     KASISLENNYVDLGTYRYVLENRNHNYHLFNPLIPNSTSKEMNATSVSSIPKKESVTN
                     VPTLDKKETEQNLTQLQKDFSAHQLENQKAKQSMINAQSELRRLNSQLNVLQKYVNSR
                     RLGYYTQQAVLEQISIIQNKIKQTQTIFNDANATVKLTDQKLEEAKLALGSVNDLVLI
                     KASAPAMQATNQDTSMMNIIQADWISQYANTALSELSAQANSALQISNSLDRQLFKQS
                     DKFNVWSSVEHQKTEHKSDLYRPYKQQTNLTQLGIQMPIDNGLMFGVALSKNHANAEF
                     NEGVNGKSNLLMASLYGKWQSQQGTFISLDGSYGKAKNQLYLFGENHFTRRISSIGAN
                     IGHQFDLAGVQIQPTIGARYYHFSGQDYTLGGAKISSPNTHFMTYQAGLKASKTFSLD
                     DWKVEPSITTHYVDASNKRLAVNVNNNNINQRFGRYLKTEAGIRFEHNQWQFDLHAGF
                     INGNEIKKQHFAGVKLGYSW"
     gene            complement(4373..5467)
                     /gene="mobA"
                     /locus_tag="PXB09_002160"
     CDS             complement(4373..5467)
                     /gene="mobA"
                     /locus_tag="PXB09_002160"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5234233.1"
                     /translation="MSKTIEERISAVILAGGLARRMNGVEKGLQLFEGKPLISHILAR
                     LSPQVSDIWLNVNRSIEQYQQLYPAFSYYQDSLPDFQGPLSGMLAGFEQIESDYLLFV
                     PCDTPFMPELLLQKLKTALRINNVQIAYAHDGERPHPTFALIHRSVQEDLKAYLGSNQ
                     QQLLAFFQSQKSVAVDFSEQKSAFTNVNTLEDLSRVSQFPVKNLAITGYSGTGKTTLL
                     EKLIPKLTACGIRVGLIKHSHHNVDVDKKGKDSYRLREAGANPTMIVCDERWALMTET
                     KQAVEFSQLIAKFNPQEVDLVFVEGFKHETLPKIQLHRKGIEKPLPELDQWTIATATD
                     YPLERENWLDINNIGGIADFIKNWLENKAS"
     gene            5554..5823
                     /locus_tag="PXB09_002161"
     CDS             5554..5823
                     /locus_tag="PXB09_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1040 family protein"
                     /protein_id="HDL5234234.1"
                     /translation="MKCERLEELLELLGEHWRKNPDLHLIDILQQLSVEVGEPDNFKA
                     LSDEVLIYQLKMRNAGKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            5887..6525
                     /locus_tag="PXB09_002162"
     CDS             5887..6525
                     /locus_tag="PXB09_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5234235.1"
                     /translation="MKKLALKTAFVALSALFTFNSTAIAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELSYKIPSQIKEKLPSDSKLVQYHVNFLGRQSEDLTRAWAL
                     AMALGAEDKVKTALFEGAQKDAFKSMDDIRSVFLANGITAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFADSSSTNDFIKRYVDAVVFLSKK"
     gene            6609..7385
                     /locus_tag="PXB09_002163"
     CDS             6609..7385
                     /locus_tag="PXB09_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5234236.1"
                     /translation="MTKLSILNLVPIREGQTAKQAVDSMVKLAKHAESIGIERYWIAE
                     HHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLPNHSPYIVAEQYGTLETLYPNRV
                     ELGLGRAPGTDMRTATALRRNAQSLPFPDEISELKGYFEGTNSVSAYPAQGLNVPFYI
                     LGSSPESAYLAAERGLPYAFASHFAPRFMDDAVRIYRTHFKPSEVLDKPYVILGVNAI
                     AAETDQEAEQLATTQTQFFLNVVTNAQNYLQPPVESDDKV"
     gene            7395..7649
                     /locus_tag="PXB09_002164"
     CDS             7395..7649
                     /locus_tag="PXB09_002164"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase"
                     /protein_id="HDL5234237.1"
                     /translation="MKAEIVPHFGPVSFQQNALYNQEKPVVRQMTACSLIGSRESIEQ
                     QLKSLKARIEIDEIMAVSYIFDEQKQHQSYTWLKEIADKV"
     gene            7651..7944
                     /locus_tag="PXB09_002165"
     CDS             7651..7944
                     /locus_tag="PXB09_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5234238.1"
                     /translation="MSKTMQQKAADAHNMCKLKGDSMLDNSDRQIAFEAVYDSEEIAV
                     QAVEFFTQKAKSVETEPCDIQSEITPIIDGFLMKMWITFSCQAEVILFQMAVR"
BASE COUNT         2664 a         1570 c         1492 g         2225 t
ORIGIN      
        1 ttgacagcaa acactactta gtaattttat ataaaataag ggaagacatc ttgccaaact
       61 atcagttata agacagaata gccagaattt tttattactt ataaggataa acttctcatt
      121 tatgaagacc aaaacattta ctcgttctta tcttgcttct tttgtaacaa tcgtattaag
      181 tttacctgct gtagcatctg ttgtacgtaa tgatgtggac tatcaatact tccgcgattt
      241 tgccgaaaat aaaggaccat tttcagttgg ttcaatgaat attgatatta aagacaacaa
      301 tggacaactt gtaggcacga tgcttcataa tttaccaatg gttgatttta gtgctatggt
      361 aagaggtgga tattctactt taattgcacc acaatattta gttagtgttg cacataatac
      421 tggatataaa aatgttcaat ttggtgctgc aggttataac cctgattcac atcactatac
      481 ttataaaatt gttgaccgca atgattatga aaaggttcaa ggagggttgc acccagacta
      541 tcatactcct cgattaaata aattagtaac agaagttgtg cctgccgcag tcaccaatgc
      601 aggtacatct attaaaccct acttaaatga agaacgcttc cctatgtttc ttcgtgctgg
      661 ttcagggaca caagcgctaa gaggaaaaga aagtaataaa acaactggaa tcgctggtgc
      721 ttatgaatat cttactggcg gtaccacatt acaattatct aaaagctccc ctgatcactg
      781 gttagattat tcaagtaacc tttatcaagt aagctatgga ccactttcaa cctatgcact
      841 acctggtgat agtggttcag gttcttacgc ctatgatatg aacgaaaaac gatgggtatt
      901 agttggtgtg ctcaatttct ataatggtat ggataatcaa ttcaaccgct ctgcgattat
      961 ccgtaaagat ttccacgaga aaaaatttgc cgaagatatt gcaggaacaa tcaataatac
     1021 cgtacaaaat gcacaattca attggactgc tcaaggtaaa tccagctctc ttagtcaatc
     1081 aaataatgtg caaaaactca acgttgatct aaaagatagt agcattgcaa accaaaacac
     1141 ttctctgcca caagaaaatc acggtaaaac cattaatttt aatggtaaag atgcaactat
     1201 tgtactaaaa caggatattg accaaggtgc aggtgcatta aatctgaacg ctaatctcac
     1261 tattcgtcct gaaacagacc aaacttggca aggtgcaggt attatcgtcg gtaaagataa
     1321 aaaagtgaat tggcaagtaa aaaatccaca aggcgatcgt ttatctaaac tcggggaagg
     1381 aacactctat gtaaatggac gtggacagaa tcttggcgat atcagtgtag gtgatggtat
     1441 tgtaatactt aaccagcaag ccgatcacca aggaagaaaa caggccttta atacagtagg
     1501 aatcgtaagt ggtcgcccca ctgttgtgct aggtagtgca gatcaagtta atcccgataa
     1561 tatttacttt ggatttcgcg gaggtcgttt agacctaaac ggtaacagca tcgcctttaa
     1621 acgtattcaa aacagcgata aacatgctcg tattgtaaac cacaatcgcg atcacatttc
     1681 taccttaata atacaaggcc aagatcctct cactagtaat gatcttatat ggggaaaatg
     1741 ggcaagtaat agcccagcag acatttacga atataccaat ccttatcaaa ataaacgcaa
     1801 agattacttc cgtctgaaag gtaattcgag agtatattat ccaacgaatg ctacaagtaa
     1861 cgatcactgg gaatttcttt ccagtaaccg cgagcaagca atacagaaaa tcctagatgc
     1921 caaaaactta agacagcgct atgacacgtt taatggtttt ataggggaag atgcttccaa
     1981 taaaactaat gggatattaa atgtcgtgtt tgatacaaaa acagaagtaa atacagaaca
     2041 agataaatta aagaatatct acacaatgtc gggaggattt aaccttaatg gtgaactcac
     2101 ccttaaaggt ggtacattgt tgctttctgg tcacccaacg ccacacgctt atgatattaa
     2161 gaataagcat gatgttgtgc gtgaaaacga ttggcaagac agccatttta ctgctaaaaa
     2221 tatcacggta aataaaatgg cacaactcta tatcgggaga aatgtcaatg aagtaaatag
     2281 tcactttact gcgactgata aagccaaact caatttagga tttattaatc gttcaacgcc
     2341 aagttgctat gattctgaat acacaggcac tacacattgt gaagtgcaag cggtcatttc
     2401 cgataatatt tttgcaaatc tagcaacaac cgccattaaa ggtaatgtta aattacaaaa
     2461 ccatagccaa ttaaatttag gcaaagcaaa cctcactggt tctgtacaag ctgatcaaac
     2521 aactcatatc actttagcaa atcacagtca ctggttaaac aatggtacga gccagattgg
     2581 gcatcttaca atggaaaaag ggtcgatcct tagcctaaac gataaatttg ctaccacgga
     2641 aatcccagtc cgattcaaca agatgatcat ccaaggtaat ctaaaaggta atggacgaat
     2701 taactatacc gcaaatttag ccaagggcga atctgatcat ctccaagttg acggtattgc
     2761 tgaaggaaat tttgtccttg ccgttagaaa tagcacaact gaagcaaatc caaaaagctc
     2821 attaaaccta ctaagcttaa aaaatagcaa ccaagaaggc aataaagctt ctatttctct
     2881 agaaaataat tatgttgatc taggtactta tcgttatgta ttagaaaatc gtaatcacaa
     2941 ttaccattta tttaatccat taataccaaa ttcaacctct aaagagatga atgctacatc
     3001 tgtatcctct attccaaaaa aggaatctgt tactaatgtt cctactttag ataagaaaga
     3061 aactgaacaa aatcttactc aactacaaaa agatttttca gcacaccaat tagaaaatca
     3121 aaaagcaaaa caatctatga taaatgctca atctgagcta agacgactca attcacaact
     3181 gaatgtattg caaaaatatg tgaattctcg tcgcttaggt tactatactc agcaggcagt
     3241 tttagaacaa attagcatta ttcaaaataa aattaaacaa acacaaacaa tatttaatga
     3301 cgctaatgca actgtaaaac tcacagatca aaagctagaa gaagccaaat tagctctagg
     3361 ctctgtaaac gatcttgtat taataaaagc ctctgctcca gcaatgcaag caactaatca
     3421 agatacgagt atgatgaata ttattcaagc agattggata agccaatacg ctaacacagc
     3481 actttctgaa ctctcggcac aggctaattc tgctctgcaa atcagtaata gcttagatcg
     3541 ccaactcttc aaacaaagcg ataaattcaa cgtatggagc agcgtcgaac atcagaaaac
     3601 cgagcataaa tcagatttat accgcccgta taaacaacaa accaacctga cccaactggg
     3661 catacaaatg ccgatagata acggtttaat gtttggagtt gcattatcta aaaaccacgc
     3721 taacgcggaa tttaacgagg gtgtaaacgg taaatcgaat ctactaatgg caagcctata
     3781 tggtaagtgg caatctcaac aaggcacttt tatcagcctt gatggcagct acggtaaagc
     3841 aaaaaaccaa ctctacctat ttggtgaaaa ccactttacc cgccgaattt cctctattgg
     3901 tgctaacatt ggacatcaat ttgacctcgc aggagttcaa attcagccaa caataggagc
     3961 aagatactac catttcagcg gccaagacta tacactagga ggagcgaaaa tcagctcacc
     4021 aaatacccac tttatgacat atcaagcggg tctaaaagct agtaaaacct tttcattgga
     4081 tgactggaaa gttgaaccaa gcattacaac ccactatgtg gatgcaagta acaaacgctt
     4141 agcagtaaac gtcaataata acaatatcaa ccaacgtttc ggtcgctatc tgaaaaccga
     4201 agctggtatc cgatttgaac ataaccaatg gcaattcgac ttacacgctg gtttcattaa
     4261 cggcaacgaa atcaaaaaac aacattttgc tggtgttaag ctaggatata gctggtaaga
     4321 aaaagcccct agaactattt ctaggggctt tttctactct taaaaagagt atctaacttg
     4381 ccttattttc taaccaattc ttaataaaat ctgctattcc cccaatatta ttaatatcca
     4441 accaattttc tctctcaagc gggtaatccg ttgcggtggc aatcgtccat tggtctagct
     4501 ctggcaatgg tttttcaatc cctttgcggt ggagctgaat ttttggcaag gtttcgtgtt
     4561 taaagccttc tacgaaaacg agatcaacct cttgcgggtt gaattttgca attaattgag
     4621 aaaattcgac cgcttgtttg gtttctgtca ttaatgccca acgttcatcg cacacaatca
     4681 ttgtcgggtt tgctcctgct tcacgtaggc ggtagctgtc tttgcctttt ttatctacat
     4741 caacgttatg gtgggaatgt ttaatcagcc caacccgaat accgcaagcg gtcaattttg
     4801 ggattaattt ttccaataag gtggttttac ctgtgccgct gtagcctgta attgcaaggt
     4861 tttttacagg gaattggctt actcggctta aatcttccaa tgtattcacg ttggtgaatg
     4921 ccgatttttg ttcggaaaaa tcaactgcca cgcttttttg tgattggaag aacgcaagca
     4981 attgctgttg gtttgagcct aaataggctt tcaaatcttc ttgtaccgaa cgatgaatca
     5041 acgcaaaagt gggatgtgga cgctcaccat catgggcata tgcaatttgt acgttattta
     5101 tccgcaaagc agtttttaat ttttgcaata acagctcagg cataaagggc gtatcgcaag
     5161 gcacaaaaag caaatagtca ctttcaattt gctcaaatcc tgccagcatt ccactgagtg
     5221 gaccttgaaa atcaggcaag ctatcttgat agtaagaaaa agcaggataa agctgctgat
     5281 attgctcaat agaacgattg acattaagcc aaatgtcact aacttgtggt gaaagtcggg
     5341 ctaaaatgtg tgaaataagc ggttttcctt caaaaagttg taaccctttt tctaccccat
     5401 tcattcgacg agctaaaccg cccgctaaaa tcacggctga aatgcgttct tctattgttt
     5461 tactcacagc tttatccctt aaaattttgc aaaaataaga gtaaaagtat attatttcgt
     5521 ttaatttcca acaagttttt taaggggtaa aagatgaaat gcgaacgttt agaagagtta
     5581 ttagagttac ttggcgaaca ttggcgtaaa aatcctgact tacacctcat tgatattttg
     5641 cagcagcttt cagttgaagt gggcgagcct gataatttca aagcgttaag cgatgaagtg
     5701 ttaatctatc agcttaaaat gcgaaatgca ggcaaatttg agcctattcc cggcataaaa
     5761 aaagattatg aagatgattt taaaacggct ttattgcgag ctcgtggaat tttaaacgat
     5821 taagattgtc ttatccgtta gctagtttag catttattat ttatcaacat ttttgaagga
     5881 atcattatga aaaaattggc attaaaaacg gcatttgttg cactttctgc cctttttaca
     5941 tttaactcaa cggcaatcgc tgctgatcca accgcaggca aagaatatat cgaagtgcgt
     6001 aaagcacctt ctgcacaaaa agaagtggtg gaatttttct cattctactg cccacactgt
     6061 tatgattttg aattaagcta caaaatccca agccaaatca aagaaaaatt accaagcgat
     6121 agcaaattag tgcaatatca cgttaatttc ttaggtcgcc aatctgaaga tttaactcgt
     6181 gcttgggcat tagcaatggc attaggtgcg gaagataaag taaaaaccgc attatttgaa
     6241 ggtgctcaaa aagacgcatt caaatcaatg gacgatattc gctctgtatt cttagcaaac
     6301 ggcattacag ctgaacagtt tgatagcggt attaatagct ttgcggtaaa tggcttagtg
     6361 aataaacaag ttcaattagc ggaagacttc caaattcgtg gtgtgcctgc attcttcgta
     6421 aatggtcaat accaactcaa cttagaaggc tttgcagatt cttcatcaac gaatgatttc
     6481 atcaaacgtt atgttgatgc ggttgtgttc ttaagcaaga aataacccct taaaatagtt
     6541 agggttttta caatgctgag taggtaaatc ctattcagca ttttttatat gcaaactcgg
     6601 agaacaaaat gacaaagtta tctatcctaa accttgtacc tattcgtgaa gggcaaactg
     6661 ccaaacaagc ggtcgattct atggtgaaat tagcaaaaca cgcggaaagt atcggcattg
     6721 aacgctattg gattgcagag caccacaata tgaaaaacct tgccagctcg gcaacacagc
     6781 tcctcattca gcatgccctt tctcacactg aaaaattaag agtgggatca ggtggcgtga
     6841 tgttgcctaa ccatagtcct tatattgtgg cagagcaata cggtacgctt gaaacactct
     6901 accctaaccg tgtagaactt gggcttgggc gagcaccagg caccgatatg cgaaccgcta
     6961 ccgctttacg ccgtaatgca caaagtctgc catttcctga tgaaatcagc gaactaaaag
     7021 gttattttga aggcacaaat tctgtgtctg cctaccctgc acaggggttg aatgtgccgt
     7081 tttatatttt aggctcaagc cctgaaagtg cctatttagc agcagaacgt ggcttgcctt
     7141 atgcctttgc ttcacatttc gctcctcgtt ttatggacga tgcggtgcga atttatcgca
     7201 cacactttaa gccgtctgaa gtgttagata aaccctatgt gattttaggt gtgaatgcga
     7261 ttgcggcaga aaccgaccaa gaggcagaac agcttgctac cactcagact cagtttttct
     7321 taaatgttgt taccaatgcc caaaactatt tacaaccgcc cgtcgaatcc gatgataaag
     7381 tgtgaaaaaa ttttgtgaaa gcggaaatcg taccgcattt cgggcctgtt tcgttccaac
     7441 aaaatgcgtt atacaaccaa gagaaacccg ttgttcgcca aatgactgct tgttcactta
     7501 tcggtagccg agagagcatt gaacaacagc tcaagtcatt aaaagcacgc attgaaattg
     7561 atgaaattat ggcggtaagc tacattttcg atgagcaaaa acagcatcaa tcctatactt
     7621 ggttaaaaga gattgcagat aaggtgtgat atgagcaaaa caatgcaaca aaaagccgct
     7681 gatgcacata atatgtgtaa gctaaaaggc gactctatgt tagataactc agaccgccaa
     7741 attgcctttg aagcagtgta tgatagtgaa gaaatagctg tacaagcggt cgaatttttc
     7801 acacaaaaag caaaatcggt agaaaccgag ccttgcgaca ttcaaagtga aatcacaccc
     7861 attatagatg gctttctgat gaaaatgtgg ataactttca gttgccaagc agaagtaatc
     7921 ttatttcaaa tggcggtgag atagatataa a
//
LOCUS       DANLTI010000120         7852 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.121, whole genome shotgun sequence.
ACCESSION   DANLTI010000120 DANLTI010000000
VERSION     DANLTI010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7852
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.121"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            11..3082
                     /gene="fdnG"
                     /locus_tag="PXB09_002166"
     CDS             11..3082
                     /gene="fdnG"
                     /locus_tag="PXB09_002166"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:596..598,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDL5234239.1"
                     /translation="MQISRRKFFKVCAGGMAGTSAAMLGFAPATALAAPREYKLLRAK
                     ETRQTCTYCAVGCGMIMYSLGGEAMNSKGKLIHIEGDSDHPVSRGALCPKGAGALDYV
                     NSDRRVHYPEVREAGSSEWKRISWHEAIERIARHMKNDRDENFVTHNEAGLEVNRWMT
                     AGFLAGSACSNETGIVTQKFIRSLGMIFTDNQASIUHGPTVASLAPSFGRGAMTNHWV
                     DIKNSDLVIVMGGNAAEAHPVGFRWAVEAKKQNGAKLMVVDPRFNRSAAVADIYIPLR
                     PGTDIAFLLGAVNYLLKNDKIQHEYVKHYTNATFLLNEGFKFEDGLFTGYDEATRTYK
                     DKSTWAYQLDEQGQPKRDMTMQDPRCVINMLKDHVSRYTPEMVERITGTPQKDFLIFC
                     EEIAKTSAPDKAATFLYALGWTQHTVGAQNIRSMAIIQLLCGNIGVSGGGVNALRGHS
                     NVQGITDLGLFPHMLPGYIRLPTEADATLESYLNAIAPKTLVAGQVNYGQNNPKFAVS
                     MLKTFYGDKATKENEFGYHYLPKYPKGGTDHFRFIEQMYQGKVNGYFCQGMNPIASYP
                     NSQKLIKALSNLKYLVIFDPLITDTSEFWKNHGEFNNVNPSEIQTEVFRLPTTCFAEE
                     DGSIANSGRWLQWHWKAADAPHEAKPDVDILSEIRAELIHLYHKEGGKAPLEPLEAMT
                     WNYMNPLEPKPEEIAKENNGYALEDLKDADGNIIVKKGELLSSFTQMRDDGTTSGGCW
                     IYCGQWTPKGNQMANRDNSDPSGLGNTLGWAFSWPVNRRILYNRASADLSGKPWNPKR
                     QLVKWNGKNWNYVDVADYGTAPPNSPVTPFIMQPEGVSGLFVRERMQDGPFPEHYEPF
                     ETPIGTNPLHPNVISSPVARILPSDKEDLGTSDEFPYVGTTYRLTEHFHYWTKNALIN
                     VIAQPEQFVEIGEKLAEEKGIKNGDKVRVWSKRGEIKAVAVVTKRIRSLVSDGKPIHT
                     IGVPIHWGFAATTGAKKGYFANNLTVRTGEPNSNTPESKCMLLNIEKIVGA"
     gene            3085..3999
                     /gene="fdxH"
                     /locus_tag="PXB09_002167"
     CDS             3085..3999
                     /gene="fdxH"
                     /locus_tag="PXB09_002167"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDL5234240.1"
                     /translation="MSTVQTQNIIKISATSALTPAPQARSHQVEVAKLIDVTTCIGCK
                     ACQVGCSEWNDIRSDVNANCVGVYDNPADLNAKAWTVMRFNEVEENDRLEWLIRKDGC
                     MHCAEPGCLKSCPSPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPDDNRVY
                     KCTLCVDRVNVGQEPACVKTCPTGAIRFGSKEEMKFYAEQRIADLKSRGYENAGLYDP
                     EGVGGTHVMYVLHHADKPELYSGLPKDPKIDTTVTLWKDVLKPVAAVALGGLALAEVA
                     HYITVGPNVEEDLEEHHHSENAEGGKHE"
     gene            3992..4669
                     /locus_tag="PXB09_002168"
     CDS             3992..4669
                     /locus_tag="PXB09_002168"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDL5234241.1"
                     /translation="MSKKFEITNDTKIVRHKPLARVSHWFLVISFFMTMFTGVAFFFP
                     DFAWLTEILGTPQIARAVHPFTGIIMFIAFIIMALIYWHHNIPEKNDIRWAKGIVEVL
                     KGNEHKVSDNGKYNLGQKLLFWTLILAMFTLLATGIIMWRQFFSHYFSIPMLRIAILL
                     HSASAFMLFTGILVHMYMAFWVKGSIRGMVEGWVTVRWAKKHHPRWYREEVLPELERQ
                     VAEQNNK"
     gene            4725..5642
                     /gene="fdhE"
                     /locus_tag="PXB09_002169"
     CDS             4725..5642
                     /gene="fdhE"
                     /locus_tag="PXB09_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDL5234242.1"
                     /translation="MSIKILPQDDIKQAASSFQQPELLFANPKNLYLRRAKRLRELAK
                     QNPFGEYMEFSANLVDIQLALLESQPIADYSQKITACVERTQGETPLNAQNFQRTDEW
                     RTLLLAIIEKFKPYANDTVLATIEVLEKAAKSELDTLADNLLNERYELVGADKAVFIW
                     AALSLYWVQLAQQLPRNSRAEIGHKHLCPVCNSAPVSSVIHFGEAQGLRYLHCSLCES
                     EWHVVRTKCTNCDETGKLDYWSLDTVEAAVKAESCGDCHSYLKVLYQDKDVNVEPVAD
                     DLATLFLDSEMEQKGLSRSGINPFLFQVE"
     gene            complement(5712..6098)
                     /locus_tag="PXB09_002170"
     CDS             complement(5712..6098)
                     /locus_tag="PXB09_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234243.1"
                     /translation="MLRNFMIMLHFIYGFAMKNAFSFFVISLFLTMNSISYASNPIPS
                     NKEKLNGVKKQQDKPKFRISERKVLKNKEKDEEVSNFSMEELRVGAQRPLDDSVIQYF
                     KSQCRYAFMSDREIIANRCEVKKIAD"
     gene            complement(6109..7479)
                     /gene="gorA"
                     /locus_tag="PXB09_002171"
     CDS             complement(6109..7479)
                     /gene="gorA"
                     /locus_tag="PXB09_002171"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDL5234244.1"
                     /translation="MAKHYDYIAIGGGSGGIASINRAASYGQKCAIIEAKHLGGTCVN
                     VGCVPKKVMFYGAQVAEAINHYAPDYGFDITVNNFDYAKLVESRQAYIGRIHTSYGNV
                     LAKNNVDVLNGFARFKDAKTLEVSYADGSVEEVTADHILIATGGRPTVPNVKGAEYGI
                     TSDGVFALDALPKSVAIVGAGYIAVELAGVFNSLGVNTHLFVRQHAPMRNQDPLIVDT
                     LLEVLAQDGIELHTQATPQEVVKNADGSLTLKLQDGRETSVESLVWAIGREPATDKIN
                     LEAAGVETNERGFIKVDKFQNTNVPNIYAVGDIIEGGIELTPVAVAAGRRLSERLFNN
                     KPNEHLDYSLVPTVVFSHPPIGTVGLSEPKAIEQYGAENVKVYKSSFTAMYTAVTQHR
                     QPCRMKLVCVGEGEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSE
                     EFVTMR"
     gene            complement(7556..>7852)
                     /locus_tag="PXB09_002172"
     CDS             complement(7556..>7852)
                     /locus_tag="PXB09_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDL5234245.1"
                     /translation="LVMVIVGGYETFVSRLKVDDHPDQPEWLDHVNATILKVKLSMAI
                     ISISSIHLLQTFINASNLDEKQMMWQVVIHLAFIVSALAMAYIDKMLNSGHMKH"
BASE COUNT         2360 a         1723 c         1646 g         2123 t
ORIGIN      
        1 tggagtgatt atgcagatct caagacgtaa gttcttcaag gtctgtgcag gtggtatggc
       61 gggaacttct gctgcaatgt tgggttttgc tccagcaaca gcattagctg caccgcgtga
      121 gtataagctc ttaagagcaa aagaaactcg acaaacctgt acttactgcg cggtaggctg
      181 tggcatgatt atgtacagct taggcggcga agcaatgaac agcaaaggaa agttaattca
      241 tattgagggt gattctgacc atccagtaag ccgtggggcg ttatgtccga aaggtgcagg
      301 ggcgttggac tatgttaata gtgaccgccg tgtgcattat ccggaagtgc gtgaagccgg
      361 ttcaagtgag tggaaacgca tttcttggca cgaggcaatt gaacgtattg cccgccatat
      421 gaaaaatgac cgtgatgaga acttcgtcac ccacaatgaa gcagggctgg aagtaaaccg
      481 ttggatgacg gcaggtttct tggcaggctc ggcgtgtagt aacgaaaccg gtatcgtcac
      541 ccagaagttt atccgctctc tcggtatgat ttttaccgac aaccaagcga gtatctgaca
      601 cggaccaacg gtagcaagtc ttgctccatc atttggtcgc ggtgcgatga ccaaccactg
      661 ggttgatatt aaaaactccg atttagtgat cgttatgggc ggtaacgcag ccgaagctca
      721 ccctgtgggt ttccgttggg cagttgaagc gaaaaaacag aacggtgcga agttaatggt
      781 ggtagatcca cgctttaacc gtagtgctgc ggtggcggat atttatatac cattgcgtcc
      841 gggtacggac attgcgttct tgttaggtgc ggtaaactac ctgcttaaaa acgacaaaat
      901 tcaacacgag tatgtgaagc attacaccaa tgccacattc ttactcaacg aagggtttaa
      961 attcgaagac gggcttttca ccggctacga tgaagccact cgtacctata aagacaaatc
     1021 cacttgggct tatcagttag atgaacaggg tcagccgaaa cgggatatga caatgcaaga
     1081 tccacgttgt gtgatcaata tgctcaaaga ccacgtttcc cgctatacgc ctgaaatggt
     1141 agaacgcatt accggtacgc cacaaaaaga tttcctgatt ttctgtgaag agattgcgaa
     1201 aacctcagcg ccggataaag ccgccacctt cctctatgcc ttaggttgga cacaacacac
     1261 cgtgggcgca caaaacattc gctcaatggc gatcattcag ttgctgtgcg gtaacattgg
     1321 tgtctccggc ggtggggtaa acgcactgcg tggtcactct aatgtacaag ggattaccga
     1381 cctaggcttg ttcccacata tgttgccggg ctatatccgc ctgccaaccg aagcggacgc
     1441 aaccttagaa agctacttaa atgcgattgc accgaaaacc ttagtggcag ggcaagtaaa
     1501 ctacgggcaa aacaacccga aattcgctgt gagtatgctc aaaaccttct acggcgataa
     1561 ggcaaccaaa gagaacgagt tcggctatca ctatttaccg aaatacccga aaggcggtac
     1621 agatcacttc cgctttatcg aacagatgta tcaaggcaaa gtgaacggct atttctgcca
     1681 aggtatgaac ccgattgcct cttaccctaa ctcgcagaag ttaattaaag cgttgagcaa
     1741 tttgaaatat ttagtcattt ttgacccgct tattaccgat acttccgagt tctggaaaaa
     1801 tcacggtgag ttcaacaatg tgaacccgtc tgaaattcaa accgaagtgt tccgcttgcc
     1861 gaccacttgc tttgcggaag aagatggttc aattgcgaac tccggtcgct ggttacaatg
     1921 gcactggaaa gcagcagacg caccacacga ggcaaaaccg gacgtggata ttctgtctga
     1981 aatccgtgcc gaactgatcc acctttatca taaagaaggc ggaaaagcac cgcttgaacc
     2041 gttagaagcg atgacgtgga actatatgaa cccgttagaa ccgaagccgg aagagatcgc
     2101 caaagagaac aacggttatg cattggaaga tctgaaagat gcagacggca acatcatcgt
     2161 gaaaaaaggc gaactattat ccagctttac acaaatgcgt gatgacggta caacctccgg
     2221 tggttgttgg atctactgcg gtcaatggac tccgaaaggt aaccaaatgg cgaaccgtga
     2281 taactccgac ccatcaggct taggtaacac cttaggctgg gcattctcgt ggccggtaaa
     2341 ccgccgtatt ctatacaacc gtgcatcggc agatttaagc ggtaaaccgt ggaacccgaa
     2401 acgccagcta gttaaatgga acggtaaaaa ctggaactat gtggacgttg ccgattacgg
     2461 tacagcacca ccaaatagcc ctgtgacacc atttattatg caaccggaag gggtatccgg
     2521 cttgttcgtg cgtgaacgta tgcaagacgg tccattccct gagcattatg aaccgtttga
     2581 aacgccaatc ggcacgaacc cgttacaccc gaatgtaatc agcagtccgg tggcacgcat
     2641 tctgccgagc gataaagagg atttaggcac cagcgatgag ttcccatatg tcggtacaac
     2701 ttaccgctta accgaacact tccactactg gacgaaaaat gccctgatta acgtcattgc
     2761 tcaaccggag caattcgtgg aaatcggcga gaaacttgcc gaagagaaag gcattaaaaa
     2821 tggcgacaaa gtacgtgttt ggtctaaacg tggcgaaatt aaagccgttg ccgtggtgac
     2881 taaacgtatc cgttcattgg tctctgacgg caaaccaatc cacactatcg gtgtgccgat
     2941 ccactggggc tttgcggcta caaccggtgc gaaaaaaggc tattttgcca ataacttaac
     3001 cgtgcgaaca ggtgaaccaa actcaaatac acctgaatcg aaatgtatgt tattaaacat
     3061 tgagaaaatt gtgggggctt aacaatgagt acagttcaaa ctcaaaacat tattaaaatc
     3121 tccgcaacct cggcgctgac accggcgccg caggctcgtt cgcaccaagt ggaagtagcg
     3181 aaactgatcg atgtcaccac ttgtatcggc tgtaaagcct gtcaagtggg ctgttcagaa
     3241 tggaatgaca ttcgctccga tgtaaatgca aactgtgtcg gcgtgtacga caaccctgcg
     3301 gatctaaatg cgaaagcgtg gacagtaatg cgctttaacg aagtagaaga aaacgaccgt
     3361 ttagaatggt tgatccgtaa agacggctgt atgcactgtg ccgagccggg ttgcttgaaa
     3421 tcttgcccgt caccgggtgc gattatccaa tacgccaacg gtattgttga tttccaatcc
     3481 gacaaatgta tcggttgtgg ctactgtatc gcaggttgtc cgttcaacat tcctcgtatg
     3541 aatccggacg ataaccgtgt ttacaaatgc accctgtgtg tggatcgtgt caatgttggt
     3601 caagaaccgg cttgcgtgaa aacctgcccg accggtgcaa tccgcttcgg tagcaaagaa
     3661 gagatgaagt tctatgcaga acaacgcatt gctgatctga aatctcgtgg ctatgaaaat
     3721 gccggcttgt acgaccctga aggcgttggc ggtacgcacg taatgtatgt attacatcat
     3781 gccgacaaac cggagcttta ttcaggctta ccgaaagatc cgaagattga taccacagta
     3841 accttatgga aagacgtttt aaaacctgtg gcggcagtag cgttgggtgg tttagcttta
     3901 gcagaagttg cacactatat taccgttggg ccaaacgttg aggaagatct tgaagaacac
     3961 caccatagcg aaaatgcaga aggaggcaaa catgagtaag aaatttgaaa tcacgaacga
     4021 taccaaaatc gttcgtcata agcccttagc tcgtgttagc cactggttct tagtaatctc
     4081 tttttttatg acgatgttta ccggtgttgc cttcttcttc cctgactttg cttggcttac
     4141 cgagatttta ggtactccac agattgcccg tgcagtccac ccatttaccg ggattataat
     4201 gtttattgca tttattatta tggcgttaat atattggcac cataatatcc ctgagaaaaa
     4261 tgatattcgt tgggcaaaag gcattgttga agtactaaaa ggtaatgagc ataaggtttc
     4321 cgataatgga aaatacaatt tgggtcaaaa attactcttt tggactctta ttcttgcgat
     4381 gttcactctt ttagccacag ggattattat gtggagacaa tttttctctc actacttctc
     4441 gattcctatg ctaagaattg caattttact tcattcagca agtgcattta tgctatttac
     4501 cggaatttta gtacatatgt atatggcatt ctgggtaaaa ggctcaatca gaggtatggt
     4561 tgagggttgg gttaccgttc gctgggcaaa aaaacaccac ccaagatggt accgtgaaga
     4621 agtgctacct gaattagaaa gacaagtagc tgagcaaaat aataaataac ctcaagtgcg
     4681 gtattattac cgcactttta ttttattggt ttaaaaagaa tattatgagt atcaaaatac
     4741 tacctcaaga tgatatcaaa caagcagcta gttcatttca gcaacccgag ctcttatttg
     4801 ctaatcccaa aaatctgtat ttacgccgcg ctaagcggct acgtgaatta gccaagcaaa
     4861 acccattcgg tgaatatatg gagttttctg ctaacctcgt ggacattcaa ttagcattac
     4921 ttgaaagcca gccaattgca gattattctc aaaaaataac cgcttgtgta gagcgcacgc
     4981 aaggagaaac accgctaaat gcacagaatt ttcagcgtac tgatgaatgg cggacactac
     5041 tcttagccat tattgagaaa ttcaagcctt atgcaaatga tactgttctt gcaacaattg
     5101 aagtattgga aaaggcagct aagtcagagc tagacacact tgctgataat ttgctaaatg
     5161 aacgatacga acttgtgggc gcagataaag ctgtctttat ttgggctgct ctctcacttt
     5221 actgggtaca attagctcaa caattaccac gtaattctcg tgcagaaata ggccataaac
     5281 atttatgtcc ggtatgtaac tcagcacctg taagcagtgt gattcatttc ggtgaagctc
     5341 aagggttacg ttatctacac tgttctttat gtgaaagtga atggcatgta gtacgtacaa
     5401 agtgtacaaa ctgtgatgaa accggcaaac tggattattg gagcttagat acagtagaag
     5461 cagcagttaa agctgaaagt tgtggcgact gccattccta cttaaaagta ctctatcaag
     5521 ataaagacgt gaatgtggaa cctgttgctg atgatttagc aactctattc ttagattccg
     5581 agatggaaca aaaaggtctt tcaagaagtg ggataaatcc atttttattt caagtagagt
     5641 aactcattta caacaaaaac ggagcataac gctccgtttt ttattacatt taactcatac
     5701 actatacttt tttaatcagc tattttttta acttcacagc ggttagcaat aatctcccga
     5761 tctgacataa atgcgtatcg gcattgagat ttaaaatatt gaatcacaga atcatcaaga
     5821 ggtcgttgtg ctccaacacg taattcctcc atagaaaaat tactaacctc ttcatctttc
     5881 tctttatttt tcaatacctt acgttcagat attctaaact taggcttgtc ttgctgtttt
     5941 tttactccgt ttaatttttc tttattacta ggaataggat tacttgcata actaatacta
     6001 ttcatcgtaa gaaaaagaga aataacaaaa aagctaaaag cgtttttcat agcaaaccca
     6061 taaataaaat gtagcataat cataaaatta cgtaacattt tattacattt agcgcatggt
     6121 tacaaattct tcagatcctg tcgggtgaat agccactgtg ttgtcaaaat cagctttcgt
     6181 tgcgcccatt ttaattgcaa cagcaaaacc ttgaatcatt tcatcaacac caaaaccaat
     6241 accatgtaac ccaaccactt tttccccttc cccaacacaa actaatttca ttcggcaagg
     6301 ttgacgatgt tgtgtaaccg cagtatacat tgcagtaaat gaagatttat acactttcac
     6361 attttctgcc ccatattgct caatcgcttt tggctcactt aaaccaacag tacctattgg
     6421 tgggtggcta aaaacgactg tcggtactaa gctataatcc aaatgttcat ttggtttatt
     6481 attgaacaac cgttccgata gcctgcgacc agctgcaact gcaacaggag ttaattcaat
     6541 accaccttca ataatatcac caacagcata gatatttggc acattagtat tttggaattt
     6601 atccactttg ataaaaccac gctcgttggt ttcaacacca gcagcctcta aattaatctt
     6661 atctgtcgct ggctcacgac caatagccca caccaagctt tcaacagagg tttcacgacc
     6721 atcttgcaat tttaatgtca atgaaccatc tgcattttta actacttctt gaggagtcgc
     6781 ttgtgtatgt aattcgatcc catcttgagc taatacttca agcaatgtat ccactattaa
     6841 tgggtcttga ttacgcattg gagcatgttg acgaacaaaa agatgggtat ttactcctaa
     6901 actattaaat actccagcta attcaactgc aatataccct gcccccacaa ttgctacgga
     6961 cttcggtaaa gcatctagtg caaatacacc atcagaagtg ataccgtatt cagccccttt
     7021 cacattgggt acagttggac gaccacctgt tgcaatcaga atatggtctg ctgtgacctc
     7081 ctcaacggaa ccatcagcat aactcacttc taatgtttta gcatctttaa agcgagcaaa
     7141 accatttaaa acatcaacat tattttttgc cagcacatta ccatatgagg tatgaatgcg
     7201 cccaatatag gcctggcgac tctcaactaa tttggcataa tcaaaattat ttaccgtaat
     7261 gtcaaaacca taatcagggg cgtaatggtt aatcgcttct gcaacttgtg caccatagaa
     7321 catcactttt ttgggtacac atcccacgtt cacacaagtg ccacctaaat gttttgcttc
     7381 aataatggca catttttgcc catagcttgc tgctcgatta attgaagcaa taccaccact
     7441 accaccgccg atagcaatat aatcataatg tttagccata agctattcct cgatctataa
     7501 aaacaaaagc aacttattcg ttaagcgctt tatcaaatta aatttgcata gaagactaat
     7561 gtttcatatg ccctgaattc aacattttat caatatacgc catcgctaat gctgaaacaa
     7621 taaaggctaa gtgaataact acttgccaca tcatttgctt ttcatcaaga tttgaagcat
     7681 tgataaatgt ttgtaataaa tgaatagaag aaatactgat aattgccatt gaaagtttta
     7741 ctttcaaaat agtcgcatta acgtgatcca accattctgg ctgatcaggg tgatcatcta
     7801 cttttaatct agagacaaaa gtttcatatc ctccaacaat aaccataacc aa
//
LOCUS       DANLTI010000121         7733 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.122, whole genome shotgun sequence.
ACCESSION   DANLTI010000121 DANLTI010000000
VERSION     DANLTI010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7733
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.122"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..2563
                     /gene="topA"
                     /locus_tag="PXB09_002173"
     CDS             <1..2563
                     /gene="topA"
                     /locus_tag="PXB09_002173"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDL5234246.1"
                     /translation="KINQYLGSNYVVKSSVGHIRDLPKSGSDEKTEKAKPISTKGLTA
                     AEKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSELKSLAKKADHIYLAT
                     DLDREGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDDPQPLNIDRVNSQQTR
                     RFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQSEEFWTILANT
                     QINRKKLPLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSNIEAKETSSRAAAPFI
                     TSSLQRAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSREALAMARGYIQDNF
                     GANYLPEKANVYRSKDNAQEAHEAIRPSDVNVKMADLKGMDKDAERLYDLIWRRFLAC
                     QMLPARYDSTAVTVSAGDYELKANGRVLRFDGWTKVLPVQGKNPEDQELPAVELHQKL
                     TLDEIVPSQHFTKPPARFNEASLVAELEERKIGRPSTYASIISTIQERGYVRTENKRF
                     YVEKIGEVVTDRLNESFKDLMNYDFTANMEEVLDQIAEGSKNWKEELNTFFKHFSEEL
                     SQAELDELEGGMKPNSLVPTDIDCPTCGRKMAIRTASTGVFLGCTGYALPPKERCKTT
                     MNLIPEAEFFNVLDSDSETKALMARKRCPKCDSAMDSYVIDAERKLHVCGNNPNCDGH
                     IIEQGSFKIKGYDGPVVECDKCGSDMHLKLGRFGKYMGCTSCDNTRKILKNGEVAPPK
                     EDPIAFPELKCEKADAYFVLRDGASGVFMSAHNFPKVRESRAPKVVELAQYRERLPEK
                     LQYLADAPQQDPEGNEAIIRFSRKEKRQYVTSEKNGKATKWIVDYLDGKWVERKK"
     gene            complement(2613..3551)
                     /gene="yvcK"
                     /locus_tag="PXB09_002174"
     CDS             complement(2613..3551)
                     /gene="yvcK"
                     /locus_tag="PXB09_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDL5234247.1"
                     /translation="MENTDIIPFKPTRHHYLNQLNAVVALGGGHGLGRLLSALSFLKE
                     RLTGIVATTDNGGSTGRIRSQQGVIAWGDLRNCLNQIIVKPTIASRLFEYRFAGTGEL
                     AGHNLGNLILTALENMQIRPLEGINLVRELLHVRSQLIPMSEIPVHLIAQLHSGESVF
                     GEVQIDSLAETPQHLALDTMVVATPEAISAIQSAELILLGPGSFFTSIMPNLLVAGIA
                     NSIAQSKARVVFIDNIGQEHGPAGQLSLNQRIEWMENCIGQARINAVITTDDAGSELP
                     EHIQILRKNLSANDVYYRHDRNKLSKAIDELLAQNI"
     gene            complement(3565..4641)
                     /locus_tag="PXB09_002175"
     CDS             complement(3565..4641)
                     /locus_tag="PXB09_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5234248.1"
                     /translation="MFQMLQDWYRKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLV
                     ALVFAYLLEWPIRFLSSKLKLPRTLSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQ
                     DLPSMFNLLNAWLQALPEHYPELVDYATLDSIVNTAKSNILSMGESLLTLSINSIISL
                     VGLGIYTFLVPLMVFFLLKDKIVLMRSFSKVLPQNRRLATRVWFEMQQQIANYIRGKF
                     LEILIVGVVTYIIFLFFDLRYPLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLS
                     PDFYYLMLAFIISQLLDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIP
                     LATLVKAVLQALPSAQSDAIILEK"
     gene            complement(4672..5427)
                     /locus_tag="PXB09_002176"
     CDS             complement(4672..5427)
                     /locus_tag="PXB09_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5234249.1"
                     /translation="MKKEEVGHHFLARLGKTRLRPGGKLATDWLIANGDFDKNKKVLE
                     VACNMGTTAIQLAQQFECQIVGIDLDEDALEKARKNIKENHVEHLIQVQRANATKLPF
                     DDESFDIVINEAMLTMLPLEAKEKAIREYFRVLKPNGFLLTHDIVIQDKDSDTLLAEL
                     RDAINITVSPLAKADWKSLFQRCGFRNVDTFSGEMSLLSPKGLIHDEGVLGAMKIIGN
                     ALKPENRETFNKMYKLFNDPDKKLGFIAVCSQK"
     gene            5579..5788
                     /locus_tag="PXB09_002177"
     CDS             5579..5788
                     /locus_tag="PXB09_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HDL5234250.1"
                     /translation="MSKQKNDYLHQRGQIKESAVKALVTDPLFRQRVERNRKGKGSYR
                     RQEKHKKTIYGQKETPFKNIRLESF"
     gene            complement(5837..6559)
                     /gene="bioD"
                     /locus_tag="PXB09_002178"
     CDS             complement(5837..6559)
                     /gene="bioD"
                     /locus_tag="PXB09_002178"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDL5234251.1"
                     /translation="MPSLFITGTDTNVGKTVVTRAIIQTLTKHSFPVIGYKPIACGGD
                     DSLPTEPTQYDYATEDNSDVLTILDSCPTNVSYRDINSYTFIHSSTPVFAALDAVHHI
                     QLEKLNTDLKRLENAYPNVVVEGTYGWLTPINKDYYFADWVMQNNMPVVLVVGIKEGC
                     VNHALLTANEILQRGVKLVSWVANRVNPGLRHYHELIELLTQKINAPLLGQIPYMGHP
                     EHKELSSYIQNPEPLLAYFSKP"
     gene            complement(6607..>7733)
                     /locus_tag="PXB09_002179"
     CDS             complement(6607..>7733)
                     /locus_tag="PXB09_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDL5234252.1"
                     /translation="LISRTDLAKLSGLAPASVTNLTKILIDNHFILERTVQTTLSRGR
                     PSVGLAVSNFFWQLLCVTVSSHKIEISLCKLNGAEIYKQDYTISAENYPRLNDFILNF
                     ITNFRQLYCVNTSQLLAVSISVIGKINAEKDSITQLGNKNIFCNITSKLSPLFHCPIL
                     LSEHFQLWLLAESTVGSLINQDNAIFLQLDDTVNLSVLLSGSLLSKQSKMNVDNMLMP
                     RFSHLSDEIFPELDEIHRYKLVNQVTFPAIVRLIDRYLPNNLKSQEQKISWLCQKIDE
                     NQPLALAILSHITDNLAYALMNLVNIFSSEKIMLNSPLIKIKEPLFTQISEKLHKNLL
                     QTNLKIDLVTSQYDWNSPLIACSAIKQGIYDGNLIKDRIN"
BASE COUNT         2472 a         1404 c         1595 g         2262 t
ORIGIN      
        1 aaaaattaac caatatcttg gtagtaatta tgtggtgaaa tcgagtgtgg ggcatattcg
       61 tgatttaccg aaaagtggta gtgatgaaaa aacggaaaaa gcgaaaccga tttcaaccaa
      121 agggctgacc gctgccgaaa aagctaaaat caaagcagaa aaagagcgtg ttgcattggt
      181 taaacgtatg ggtatcgacc cctataatgg ctggaaagct aactatcaga ttttgccgga
      241 taaagagaaa gtggtttccg agctaaaatc gttggcaaag aaagcagatc atatctatct
      301 ggcaaccgac ttggatagag aaggggaggc gattgcgtgg catttgcgtg aaatcattgg
      361 tggtgatgac agccgtttta gccgagtggt atttaatgaa atcaccaaag atgcgatcaa
      421 aaaggctttt gacgatccgc aaccgctcaa tattgaccgt gtaaattccc agcaaacccg
      481 ccgcttttta gaccgtgtag tgggctttat ggtgtcgcca ttattatgga aaaaagtagc
      541 tcgtggttta tcggcagggc gtgtgcaatc ggttgccgta aaattactgg ttgagcgtga
      601 gcgtgaaatc aaggcgttcc aaagcgagga gttttggact attcttgcca atacgcaaat
      661 taatcgtaaa aaattaccgc ttgaattaac tacttataaa ggtaaaaaat tctcggcaag
      721 caatgaggct gaagcaaatg ttgcagtgcg tgctttggag cagagcgatt ttattgtttc
      781 taatattgaa gccaaagaaa ccagctctcg agctgctgca ccatttatta cctcatcgtt
      841 acaacgtgcc gctagcactc gtttaggttt tggggttaaa aagacgatga tgttagccca
      901 acggttatat gaagcgggtt acatcaccta tatgcgtact gattcaacca accttagccg
      961 tgaagcatta gcaatggctc gaggttatat tcaggataat ttcggggcga attatttgcc
     1021 ggaaaaagca aatgtgtatc gcagtaaaga taatgcccaa gaagctcacg aagccattcg
     1081 cccgtcggat gtgaatgtca aaatggcgga tttaaaagga atggataaag atgccgagcg
     1141 tttatacgat ttaatttggc gtcgtttctt ggcgtgtcaa atgttgcctg ctcgttatga
     1201 ttctaccgca gtcacagtgt ctgccggaga ctatgaactc aaagcaaacg ggcgtgtact
     1261 gcgttttgac ggctggacga aagtactgcc ggtgcaaggc aaaaatccgg aagatcagga
     1321 attaccggcg gttgaactgc atcaaaaatt aacgcttgat gaaattgtgc caagtcagca
     1381 ttttactaaa ccgcctgcac gttttaatga ggcgtctttg gttgctgagt tagaagagcg
     1441 aaaaattggc cgcccttcaa cctatgcttc aattatttcg acgattcaag aacgtggcta
     1501 tgttcgcacc gaaaacaagc gtttttatgt ggaaaaaatc ggtgaagtag tgacggatcg
     1561 cctcaacgaa tcattcaaag atttaatgaa ttatgatttc actgccaata tggaagaggt
     1621 gctcgaccaa attgcagagg ggtctaaaaa ttggaaagaa gagttgaata ctttctttaa
     1681 acatttctct gaagagttga gccaagcaga attagatgaa cttgaaggcg gaatgaaacc
     1741 aaacagcctt gtgccaaccg atattgattg cccgacttgt ggacgaaaaa tggcaattcg
     1801 caccgcttcc acaggggtat ttttaggttg caccggctat gctttaccgc caaaagagcg
     1861 ttgcaaaacg acaatgaatt taattccaga ggcggaattt ttcaatgtgt tagattcgga
     1921 ttctgaaacc aaagccctaa tggctcgcaa gcgttgcccg aaatgcgatt cggcaatgga
     1981 tagttatgtg attgatgctg aacgtaaatt acacgtttgt ggtaataatc caaattgtga
     2041 tggtcatatt attgagcaag gttccttcaa aattaaaggc tatgacggac ctgtagtgga
     2101 atgcgataaa tgcggttcag atatgcactt aaaactgggt cgtttcggca aatatatggg
     2161 ctgcacaagc tgcgataaca cccgtaaaat tctgaaaaac ggggaagttg ctccgccaaa
     2221 agaagatcct attgcttttc ctgaattaaa atgtgaaaaa gccgatgcct attttgtatt
     2281 aagagacgga gcaagtgggg tgtttatgtc agctcataac ttcccgaaag tgcgtgaaag
     2341 ccgtgcacca aaagtggtag agttagctca atatcgtgaa cgtttgccgg agaaattgca
     2401 gtatcttgcc gatgctccgc agcaagatcc ggaaggaaac gaggcaatta tccgttttag
     2461 tcgtaaagag aaacgccaat atgtgacttc tgagaaaaac ggcaaagcca ccaaatggat
     2521 tgttgattat ctagacggta aatgggttga gcgtaagaaa taaagcttaa aagacaagcg
     2581 gtaaaatttt ctaaaaattt taccgcttgc ttttagatgt tctgagcgag tagttcatca
     2641 attgctttac ttaatttatt gcgatcgtgt cggtaataaa cgtcattcgc agataagttt
     2701 tttcgcaaga tttgaatatg ttcgggaagt tcagaaccgg catcatcagt cgtaattacc
     2761 gcattaattc tagcctgtcc gatacagttc tccatccatt caattcgctg attaagtgat
     2821 agttgcccag ctgggccatg ttcttgtccg atattgtcaa taaatactac tcgggctttg
     2881 ctttgagcaa tagagtttgc tatgcctgcc accagcaaat tcggcataat actggtaaaa
     2941 aagctacctg ggcctagcag tattaactca gcactttgaa tagctgaaat ggcttctggt
     3001 gtagcaacaa ccatagtatc taacgctaaa tgttgtggtg tttctgctaa agaatcaatt
     3061 tgcacttcac caaatactga ttcgcctgaa tgcaactgtg caattaaatg caccggtatt
     3121 tcagacattg ggataagttg cgatcttacg tgcaataatt ctcgcaccaa attaatccct
     3181 tctagcggtc ggatttgcat attttcaagg gcggtgagaa ttaaattgcc tagattatgt
     3241 ccagcgagtt cgcctgtgcc agcaaaacga tactcaaaca accgagaagc tatcgttggt
     3301 ttaacgataa tttgatttaa acagttgcgt aaatctcccc aagcaatcac cccttgttgt
     3361 gaacgtattc taccggttga gcctccatta tcggtagtgg caacaatgcc ggtaagccgt
     3421 tcctttaaaa aagagagcgc ggagagcaat cgacctaagc cgtggccccc acctagtgca
     3481 acaactgcat tgagttggtt taaatagtga tgtcgggtag gtttaaaagg aataatatct
     3541 gtattttcca tcttgggatt tcgtttattt ttctaaaata atggcatctg actgggctga
     3601 aggcaatgct tgtaatacag ctttaaccaa agtcgctaaa ggaatcgcaa aaaacactcc
     3661 ccaaaagccc cataaaccac caaagatgag tacggcaata ataattgtca gagggtgtag
     3721 atttactgct tcagaaaata aaaagggtac gagtaaattt ccgtctagca actgactaat
     3781 aataaatgcg agcattaaat agtagaaatc cggcgataac ccgaactgga atagagcaat
     3841 taacattacc ggaatgctga ctaaaaccgc accgatgtag ggaactaaca ctgaaatccc
     3901 taccgctaca gaaagtagta acggatagcg taaatcaaaa aagaggaaaa taatataagt
     3961 gacaacccca acaattagaa tttctaaaaa tttacctcga atatagttgg caatttgttg
     4021 ttgcatttca aaccatactc gtgttgcaag tcgacggttt tgcggtaata ctttactaaa
     4081 agaacgcatt aaaacgattt tatctttcag taagaaaaag accatgagtg ggactaagaa
     4141 ggtgtaaatg cctaagccaa ctaagctgat gatagagtta atcgagagtg ttagaagtga
     4201 ttctcccata ctcaaaatat tacttttagc ggtattcaca atggaatcta gggtcgcata
     4261 atctactaat tcagggtaat gctccggtag ggcttgtaac caagcattga gcagattaaa
     4321 catcgaaggt aaatcttgaa taaaggtaac tgcttgattc caaaggctgg gtagtagtac
     4381 tacgcctaaa aaagataata aagcgatgaa acctcctagt actagaatga cactcaaagt
     4441 tcgaggtaat ttgagtttgc tcgacaaaaa acggattggc cattccaata aataggcaaa
     4501 cacaagtgca accagaaggg gcataagcag atcgctaaaa aaatagataa taccgaaacc
     4561 gatcaataga atactaaaca gcacaactat ttgcgggtcg gtaaattttt ttcgatacca
     4621 atcttgcaac atttgaaaca tatggattgc ctttaaatta tgcgatgaaa attatttctg
     4681 gctacagact gcaatgaacc ctagcttttt gtccgggtca ttaaatagtt tgtacatttt
     4741 attaaaggtt tcgcgatttt ctggttttaa tgcattgccg ataattttca tggcgcctaa
     4801 aacaccttca tcatgaatca gacctttagg ggaaagtaga gacatttctc cggaaaaggt
     4861 atcaacatta cggaaaccac aacgttggaa taatgatttc cagtctgctt tagcaagtgg
     4921 agagacagtg atattgattg catcacgcaa ctcggctaat aaagtatcgg agtctttatc
     4981 ttggataaca atatcgtgcg ttaataaaaa gccatttggt tttaatacac gaaaatattc
     5041 acgtattgcc ttttctttcg cttctagagg aagcattgtc agcatggctt cattaattac
     5101 aatatcaaaa ctttcgtcgt caaatggcag ttttgttgcg ttggcgcgct gtacttgaat
     5161 taaatgctca acatggtttt ctttgatatt tttacgtgct ttttcaagcg catcttcgtc
     5221 taaatcaata ccaacaattt ggcattcaaa ttgttgagct aattggattg cagtagtccc
     5281 catgttacag gcaacttcga gcactttttt atttttatca aaatccccgt ttgcaattaa
     5341 ccaatcagtt gctaatttcc ccccggggcg taaacgagtt ttgcctaaac gagctaaaaa
     5401 atgatgacca acttcttctt ttttcataaa aacctctgga tttgcaaaat acgttaaata
     5461 tatgaccgct tgtattgtga tctatgttcg ttattatact caattttttc attttcttat
     5521 atacaacatc aacagatttt gccagaatac aacctcattt tgatatgagg aaaatagaat
     5581 gagtaagcaa aagaatgatt acctccacca gcgaggtcaa attaaagaaa gtgcagtaaa
     5641 agcattagtg actgatccac tttttagaca acgtgtagaa agaaatcgta aagggaaagg
     5701 gagctatcgc agacaagaaa aacacaaaaa aactatctat gggcaaaaag aaaccccatt
     5761 taaaaatatt cggttagagt ctttttaaat ggggttttat ttgtagctta ttgtagtttt
     5821 ataagcctga taaacactat ggtttactga aataggccaa caacggttct ggattttgaa
     5881 tataagaaga aagttcttta tgctctgggt gacccatata gggaatttgc ccaagtaaag
     5941 gcgcattaat tttttgtgtc agtagttcaa ttaattcgtg ataatgccgt agccctggat
     6001 ttactctgtt tgcgacccaa cttactaatt ttacaccacg ctgcaaaatt tcattcgcag
     6061 taagtagtgc atggttaaca caaccttcct taattcccac cactaaaaca accggcatat
     6121 tgttttgcat tacccaatca gcaaaatagt aatccttgtt aataggagtt agccagccat
     6181 aggttccttc tacgacaaca tttggatagg cattttctag tcgttttaaa tctgtgttta
     6241 atttttccag ttgaatatga tgaactgcat ctaaagctgc aaatacaggg gtactggaat
     6301 gaataaaagt atagctatta atatcacgat agctaacatt agttggacag ctatctagta
     6361 tggttaatac gtctgaatta tcttcagtag cataatcata ttgagtaggt tctgtgggta
     6421 atgaatcatc accgccacaa gcaatgggtt tatagccaat tacaggaaaa ctatgttttg
     6481 taagtgtctg tatgatggct cgggtaacca cagttttccc tacgttggtg tctgttccgg
     6541 taataaataa tgagggcata aatggctcct ttcgaaaata tggctggtag tttaaccaaa
     6601 aatagatcaa tttattctgt ctttgatcaa atttccgtca taaattcctt gttttattgc
     6661 tgaacaggca attaatggac tattccaatc gtattggctg gtaactaaat cgatttttag
     6721 gtttgtttgt aacaaatttt tatgcaattt ttctgaaatt tgcgtaaata acggctcttt
     6781 tattttgatc aatggcgagt ttagcataat tttttcacta gaaaatatat taactaaatt
     6841 cattaatgca taagctaaat tatcggtaat atgcgataaa atagctaatg caagcggttg
     6901 attttcatca attttttgac aaagccagct gattttctgt tcctgacttt ttaaattatt
     6961 aggcaaataa cgatcaatga gtctcacaat agctgggaac gtcacctgat tgactaattt
     7021 atagcgatga atttcatcta gttcagggaa tatttcatca ctgagatggc taaatctagg
     7081 cataagcata ttatcaacat tcatctttga ttgtttagac agtaaactac cactaagcaa
     7141 tacacttaga ttcacagtat catctaattg tagaaaaata gcattatctt ggttaattaa
     7201 tgagccaacc gtagattctg caagcaacca cagctgaaaa tgttcactta ataaaatagg
     7261 acaatgaaac agcggcgaga gtttagatgt aatgttacag aatatatttt tgtttcccaa
     7321 ttgagtaata ctgtcttttt ctgcattaat tttaccgatc acactaatag atacagccag
     7381 gagctgacta gtattaacac aatatagttg gcggaaattt gtaataaagt taagaataaa
     7441 atcatttagc ctaggataat tctctgctga gattgtataa tcttgcttat aaatttctgc
     7501 accattgagt ttacaaagtg aaatttcaat tttatgagat gaaacagtaa cacaaagtag
     7561 ttgccaaaaa aaattagaaa cagctaatcc aacggagggg cgacctctgg ataaagtagt
     7621 ctgaaccgta cgttctaaaa tgaagtggtt atctattagt attttagtca gatttgttac
     7681 tgaagctggg gctaaccccg atagtttagc taaatctgtt cttgaaatga gtt
//
LOCUS       DANLTI010000122         7682 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.123, whole genome shotgun sequence.
ACCESSION   DANLTI010000122 DANLTI010000000
VERSION     DANLTI010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7682
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.123"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            39..725
                     /locus_tag="PXB09_002180"
     CDS             39..725
                     /locus_tag="PXB09_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234253.1"
                     /translation="MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNP
                     TRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNG
                     SFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTT
                     KSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKV
                     EFMQGHIRRV"
     gene            729..1247
                     /locus_tag="PXB09_002181"
     CDS             729..1247
                     /locus_tag="PXB09_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234254.1"
                     /translation="MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVI
                     TLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFK
                     QARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEE
                     FLYMLETGVVPD"
     gene            1265..1675
                     /locus_tag="PXB09_002182"
     CDS             1265..1675
                     /locus_tag="PXB09_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234255.1"
                     /translation="MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPV
                     QADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLY
                     DHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ"
     gene            1775..2035
                     /locus_tag="PXB09_002183"
     CDS             1775..2035
                     /locus_tag="PXB09_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDL5234256.1"
                     /translation="MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQC
                     NAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN"
     gene            2067..2876
                     /locus_tag="PXB09_002184"
     CDS             2067..2876
                     /locus_tag="PXB09_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5234257.1"
                     /translation="MMNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQK
                     LREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGD
                     YEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKK
                     TAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWD
                     KLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR"
     gene            complement(3059..4297)
                     /locus_tag="PXB09_002185"
     CDS             complement(3059..4297)
                     /locus_tag="PXB09_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDL5234258.1"
                     /translation="MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHR
                     LIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDE
                     LTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFE
                     NEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRIT
                     RSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVK
                     RGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSA
                     INACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSL
                     NKGGGFTTALEMELKPKSED"
     gene            complement(4297..4734)
                     /locus_tag="PXB09_002186"
     CDS             complement(4297..4734)
                     /locus_tag="PXB09_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234259.1"
                     /translation="MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPK
                     SQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVID
                     RISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI"
     gene            complement(4736..5083)
                     /locus_tag="PXB09_002187"
     CDS             complement(4736..5083)
                     /locus_tag="PXB09_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234260.1"
                     /translation="MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFI
                     SLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLI
                     SYIIYHSQTVTIK"
     gene            complement(5147..5263)
                     /locus_tag="PXB09_002188"
     CDS             complement(5147..5263)
                     /locus_tag="PXB09_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5234261.1"
                     /translation="MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES"
     gene            complement(5287..5601)
                     /locus_tag="PXB09_002189"
     CDS             complement(5287..5601)
                     /locus_tag="PXB09_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5234262.1"
                     /translation="MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVD
                     EWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEI
                     LA"
     gene            complement(5680..6186)
                     /locus_tag="PXB09_002190"
     CDS             complement(5680..6186)
                     /locus_tag="PXB09_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5234263.1"
                     /translation="MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMI
                     APVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELV
                     CRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLA
                     EIRKAMGL"
     gene            complement(6195..7376)
                     /locus_tag="PXB09_002191"
     CDS             complement(6195..7376)
                     /locus_tag="PXB09_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDL5234264.1"
                     /translation="MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAET
                     FPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANI
                     VGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD
                     NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTV
                     GWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLA
                     TDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDP
                     RILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKA
                     L"
     gene            complement(7483..7629)
                     /locus_tag="PXB09_002192"
     CDS             complement(7483..7629)
                     /locus_tag="PXB09_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234265.1"
                     /translation="MLAEKPKKRWRFWYAFVNGLFFDKKHCYAAYKAEVYRKQYPPEF
                     TEIT"
BASE COUNT         2245 a         1565 c         1574 g         2298 t
ORIGIN      
        1 cctttagtta tatactcatc aaaaataagg agttcctaat ggatactttg gcaagtcgtt
       61 tgaaaatcgt tttagaccaa aaaggtttaa cacaggaaaa atttgcagaa caaataggtg
      121 tttcacagcc atctgttttt aaaatcctga atggacaaac tcgaaatccc acaaggattt
      181 atgaaattgc aaacgtccta gatgtcgatg taaattggct caaaaccggc aaaggcgaag
      241 caccagattt tgcgaaaatc ggaaaaaatc cgaccgctta tgaagaggaa agctcaatgc
      301 ttcgacttga ggtgttagat gtatatgcct ctgccggcaa tggtagtttt gtcacgggag
      361 acttaaccgc ttacacgcac gcagtagaat ttgaaaatgc ctattttgca caagtctttc
      421 aacgtgcaaa tgccaaaggc ttatcaatta ttaatgtaga tggcgactca atggagccaa
      481 ctatcggtaa cggtgatttg ctgttcgtag ataccactaa atccgcttat caaggcgatg
      541 gtgtctatgt tttcagctat ggcgaaaact tatatgtaaa acgcttgcag ttcgccggtg
      601 atgaattgtt agtcatttcc gacaatccgc tttataaaga gtggagaatc acatcagaaa
      661 atgagcataa attccaaatt cacggtaaag tggaatttat gcaagggcat attaggaggg
      721 tttaggtgat ggaacatcaa aatctaactc atcttgtcta tattacatca cataaacaaa
      781 ttggagttta ttcgatttct aatttgaata ttgatgacct ttacttcaaa ggttactgta
      841 ttcagaaaaa tagagttatc acattaagag ctgatcgcat tattaaacaa tttgatgatt
      901 tagctcttgc cgaaaattat gccaaaaata ttcctcaaga tgtgttttat ctatttgatt
      961 ctcttctgaa ccagcaacga aaagaaaaaa taacaccgat ctataaaatc ggtttgtgtt
     1021 ttactggatt taagcaagct agaaaaaatg aattaattca actagcagta gataatgatt
     1081 tgagagtagt acaaaacgta actggtgcag ttgatttttt aattttcgat aaagagtcga
     1141 aaactgttgg accagcaaaa ctagcaaaag ctgaaaagtt aggaattaaa atcatcgatg
     1201 atgaagaatt tttatatatg ttagaaactg gcgttgtgcc ggattaggtt tgacttctca
     1261 atagatgttt ataccaaaat catctaaact aaaaactaac aattacatag aagaattaaa
     1321 catcaaatca ataggggaaa ccgatatgaa aaaagcactt acactacttg cactatcact
     1381 atttgcattg cctgtacaag ccgatagcct cgaacttgct cgtaataaag taaagcaaat
     1441 ttttatcagt gatgaagagc caaaggtaaa agatgcgact tggactgcac catttatctt
     1501 taaggttgga gtttttgatg acggcacgaa aagagatggc tacgccgaat atgtttgcca
     1561 agttttatac gaccacggat ttaaaggtaa aggtgtgttg gttagcgtaa tcgatataaa
     1621 aaaactagtc caaacaggtg attgggttga tcttggcaaa gctaaatgtc agtaatacat
     1681 aagggacaga ttattctgtc tctttgtatt taatcattaa tgaagaaacc tttttactac
     1741 acagttaata ctatatttta taatggggtt cataatgaaa aaattagtcc tctcgatttt
     1801 atttgttatt tcgcctatgg ctttggctta tagctgcaat gaccctatcc cttactgcaa
     1861 agaaatgcaa tcttgcgagc aagcaaagtt ttatttaaat caatgcaatg ccggtcgatt
     1921 agatagagat aacgatggca taccttgtga aaatgtttgt ggcaagaaag gaaagtccga
     1981 gaaaaaagac gataagaaat cagataaatc aaaatctaaa aaaacttcaa attagagaca
     2041 ggcgttgtgc ctgattaaaa ggggtaatga tgaataacca gtcagtttgg cacttatttt
     2101 gcgatgaatc cggtataagc ggtaagcctt tttatgcttt cggtgcatta tggataagag
     2161 aagataaaat tagcttattt gaaaaagaaa tacagaaatt acgagaaaag cactattgca
     2221 ctgatgaaat aaaatggcaa ggtacaaatt ctaaacgctt tagtgaattt tatcgtgaat
     2281 tggttagttt tttctttcag gctgattatt tattttttaa ctgtattgta gttcaacaag
     2341 ctattgtcaa taaagctttt cataacggtg attatgaaat ggcaaaacag aagcatttta
     2401 atttattgat ttgcaacaaa attgaacaat ccttatataa aaacagaata aataggtttg
     2461 ttttatctgt tgatgatcta ccttttaaat acaataaagc tgatgaggca atgcacatta
     2521 tcgctaataa tataattcgt aaaaagactg ccgtagcaaa tgctattcta gcattaaacg
     2581 aagtagattc tcgtaaatca tctggcgttc aactatgcga tttattatta ggagcaatat
     2641 taagtagcta tcaaaatgat attacatcgg aacgtaaaaa agaactaaca aaatggattg
     2701 ctttgcacct aggttgggat aaattaactt atgatacttt acaggaggaa aagaaattta
     2761 atatttggta tttttacgac cctacaaaag gacctagaat agtaagaacg agagaaacaa
     2821 aacttaaata cccactatta aaaaagaaag agcagacctt ccagcctgca cggtgagtgt
     2881 cctcaaggac ttatatgtgt aaaacaacgc ccaatttcct cactgggcgg aatcacacaa
     2941 agtagccgcc cctatgattc tttgtgtttt atgtaaataa atctgtaact ttgattaata
     3001 ttacttgttc aagatcagag atgcaaggct tttttatagt gattttataa aaatagcgtt
     3061 agtcttcaga cttcggcttc aactccatct ctaacgctgt cgtaaaccca ccacctttat
     3121 ttaaactgtg cgtaacctgc gaaattatcc actcgttgct atcaatctcc gccttaaagc
     3181 ctgaaacctg aaccggtaat tcggggataa gctccgcatt gccctcggca agagttaggc
     3241 taaaagttgc cacacctcgt tgtagttttt caaaattccg tttacaagca ttaatcgctg
     3301 attgtgcggt agcgtaagta tggggtaggg ttttaattgc ctcgctatca ctttcaatcg
     3361 gtttactttg caccactgca ttaacttgcc tgcctttgcc ttttacaaag acggtctctt
     3421 taatgctctt gccgtctttg ccttttatcg gcttgccgtc tgccccacgt tttactttag
     3481 tctttttccg cattgtgggc ttagtcactt ttttaacttg gctgttttcg tcccacgtca
     3541 cctcgcctcg cttgccggtt tgcgtgttgt gccaataggc tttaaccgct ttgtagttat
     3601 ccccttcggc aatcgaaaag ctatgggaat cccccgaact gcgggtaatg cgaaacaggg
     3661 gtaacagttt accgcttgcg gttgtggcgt ttccggcttt aatgaaaatc aaattgccgt
     3721 ttttcacggt agcaatggca tcaaattgtt ctgcgaggcg ttgcaagaga ttaatagagc
     3781 tttcgtttgt ttggtcaatg tgtttcacct cttcgttttc aaactccttg cccaccatcg
     3841 gcttgagttt gttctcttcg gcgatctgtt tcacaatttt accaatggtg gtgcggtgaa
     3901 agctccgctc gtggcgattg gtcagcgtgc ctcgcaaatc agcacttctt gcccgaatcg
     3961 tgactttatc aggtgggcca tcgtgggtta gctcgtccac cgtgtattcg cccttgtagg
     4021 tcagggggct gttttgccag cctaacccga ccgataaaat cgctcctcga cttggcaaag
     4081 cgagtaagcc atcagtgtcg tccagctcta aatccagctg gtctgcctca aagcctcggt
     4141 tgtcggttaa ggtgagttga attaagcggt gcgtgatcag ggtggaaata tctttggctt
     4201 tttcgccctc attatctttg cttggctttg ggcgaaccgt caccgaaaca gccggtgtgc
     4261 ggtggttatg attggttagc tctgttaaaa aatccattaa ataaaccctg cgacctcatc
     4321 aataatattg gcgagcagac tatcatcaac ccgtttaagc gacatcgaaa agctaattgc
     4381 ccggggcgtg ccgtctgcaa aaaaggtggt ttcctgctcg ctgattcgat caatcacaaa
     4441 ccagcctagc accataaagg ttgaaccact aatcaacgga taagccgagc cttgctctgc
     4501 catcatctca agggcaagga ttgacatttt gcccccggta atttcagggc gtagctcggc
     4561 tgaaatctcc attgtctccc ctgccttgcc ggtaaattgg ctttttggca ttgccccaac
     4621 cacatcattt tgaacgtgcg accagttcat ttctcggctg gtgtcttgat aagggattgt
     4681 caatcgcata aacacaaaat agcctagcga catcattgcg aattgttgga gcatattatt
     4741 taatcgttac agtttggcta tgatatatga tgtaagaaat caaaaataaa attgccgcaa
     4801 taagatgctc aaagtaaaca aactgcaagc ataacgcaaa attggatatg aaactaaaac
     4861 aagcataagc ttttgtttgt cggtattcct gaattttaag ttcttcaata ccaacacaca
     4921 ttattccaac tacaaggatg aatcgcagag aaatgaagaa ccaccaaaag aacataaagg
     4981 tagcttgagc ttgctcatta agttgagtaa aaacaaataa cgtaatgata tgaaaaatga
     5041 atgctgtaat cactttactg aatgtaactg ttttaatttc cattttaaaa tccttatagc
     5101 aagcggtcga gttttgcaaa ttttttgcga aaaacgaccg cttgttttaa ctttccaccc
     5161 catttcgtaa gcgggccttt tctcgccatt gccctagctc gacaatcgtc atttcatcaa
     5221 aggtgttggg tgtccaatga aacacggtag caatatcagc aatagcgtca tcaacaaact
     5281 gtggaattag gctaaaatct cgccctttcc ctgttcttcg ctgtcctctt cgtctgcctc
     5341 atcgaagtct tcgctcatta aatctaaggc tttgccggag agttttagca aatccgctgc
     5401 cgacattgtg gcaaaatcgg ctttgtctaa ttttggcgtg gtaatgcgtg gcagtacaat
     5461 acaccactca tcaacgctta actgcattaa tgaggtaaga tttgtgccac gcagttgttt
     5521 ggttaatggc ttacgcacct caatctcggt aatacgtttt tcaccacgca aaatgccttg
     5581 ttttaatgtt acttttttca ttgtttaatc cttaattatt tatcattaaa agccccttga
     5641 aaaaagggga aggggctttg ggaaaattta ggggaaaatc tataaaccca ttgccttacg
     5701 aatttccgct aagcggtctt tgccatcgac aatgtaaatt tggttgaggg tgtcgatttc
     5761 gataatatcg acaccgttca ccgttttttt gtaataggtt agcgaggctt tatagctatg
     5821 ctcggtgtca tcaccggctt tgcttgagcc ttcgtcaatt tcagcgattc gcccacggca
     5881 gactaactct accgcatcga ctgaatcgtc atcgtcgtgc tggtacgcac cgttgaaacg
     5941 gaacgcatta ccactgattg agccaccaaa tagcttgagc aaatcctctt cgtgtccgcc
     6001 gattttgaac tcaagctcca gtttctctaa acccatattg acacccacag gggcaatcat
     6061 tccgcctgct cggtagtctt caagttgcat agccagtttc ggctgtgtga cttcggtggt
     6121 ttcgcccaaa tagcttgtgc cgtccaccga aaaattaaaa ttcttaagtt ttgccggtaa
     6181 tcccattttt acctctataa cgctttaagt gtattgacta aatccactac atattcatca
     6241 ttgacccgtt gctctaagcc taggctttcg agggacggaa tccaatggta atcgtattta
     6301 ataacaaatt tgcctgattt gataatatct gcggtgatct cttcagctac ccacacacga
     6361 gcacctaaaa tgcgagggtc atcacccgat gcccaagagc gtagcttgtt gttaatcgcc
     6421 tctagcattg ttttcacacg caacggtgtg agtggcatat ccaccgccca agctaagcct
     6481 gctccgattg tctctttaat gatttgagcc gtccgcaccg actgctgaaa cgcccagcgg
     6541 gtatcggtgg caagagtgcg ggaaccccaa tagcggaaac cgttatggtt taagcaaatg
     6601 gtaatgcctt tttcgttcag gtagtttgcc tcggttgagc tctcgttaat atcaaactct
     6661 accgctttag tgataccggt tacaccgtct agctctacgt ttgagatgtt tttatgccag
     6721 ccgacagttt tgtcgatata ggcttgcaac gcacaagctc gggccactgc ataatcggta
     6781 tcataggctt ttttatcagt gttataagat ttccagtcac cgaagatcat cattccttca
     6841 cgctgagaga aattctggcg ataggtatat gcctgttctt tggtggttgc accgttgtct
     6901 gaaataaacg caaacgcatt cagcttttta gccacgctta atagttcggt cgcaacggct
     6961 tgattatcgt gctgtggtac acaaagcaat ttcggcttaa caaacacggt tgattgagcg
     7021 gttaataacg ccttaatacc ggtaaatttg ccgttttcct gcgtgccgac aatatttgca
     7081 gttaaggtgt cgctatcgtc cgactcggca actcgcacga tcaccgttgg cgttttaacg
     7141 attgagccaa tcgaattaag tgtgcggcgt aacgtgccgg tgctacctgc tttttcaagg
     7201 taatttaacg ggttagtaat taaaacgggc gtattcagcg gaaaagtctc ggcatcggct
     7261 tggtctccgg tgcaaactac tccgataacc gaagtagcag cggtggaaat ggtgacacca
     7321 cctgcattga cctcaaccac ctcaacaccg tgtagatagg tatctaaaat tgacatagta
     7381 ttccttaatt gggaaaggtt agggttgaat gttggggtaa actttaaaaa ataaccgctc
     7441 gggttgcgag cggttcgggc tgtgaaatgg ggtttaacag gattaagtga tttcggtaaa
     7501 ctccggtgga tactgttttc gatacacctc cgctttatag gctgcatagc aatgcttttt
     7561 atcaaaaaac aagccattca caaacgcata ccaaaaacgc caacgctttt tcggcttttc
     7621 cgcaagcatt gcaccacggt aacaacggct gctggaaaag gtagcggagc ttgtttaaat
     7681 tg
//
LOCUS       DANLTI010000123         7530 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.124, whole genome shotgun sequence.
ACCESSION   DANLTI010000123 DANLTI010000000
VERSION     DANLTI010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7530
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.124"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1995
                     /locus_tag="PXB09_002193"
     CDS             <1..1995
                     /locus_tag="PXB09_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5234266.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAGSFGRGLMGAGVGIAAGAAMARQPARNQMEFDRQLAMVANTAFSDRDVKGRI
                     DGKRELLDAVQKAVSVGGGSKEEALSSLDALLASGAVSTETALNLLPTLQKGAVATGA
                     SANDMAQIAISSMQQFGIKEEDIGRVLDMAVAAGQAGSFELADMASWLPQQMAAAKQA
                     GLSGIEGFERLLIANQQARVTAGTSNEAGNNLVNLLGKITAKETNERFKNIEYKDPKT
                     GKTKAIDFAKSMEHYKGKGQDSLQAFMSIMDDVVGSDKRYQELQAKLKTAKGEEQKRL
                     FNELTNLVEGTAIGEIISDRQALMALLGIKNNVQLGEKVQKDIQNSEGAVETSHAVIR
                     DTNAHKVESLKNTTEFAQMKNFEKVNGVLGTLAELLNKYANEYPNLTQFLSGATDAVK
                     IFGAALAASSVLDLLTGKKDKGGLIGDVLDKSSKASGGKGKVGKLLSVGGSFASVAGV
                     ATMLHGDQAPMSEERKAELRDPNYQARKMYEYKKEILGSRFHSFFRSNETLEQYRKDV
                     SAYEAKQKNSNTMGAVQGVLSTIPSLQELRPKVDSVTQTLSTYQADFQAFGATISAGI
                     EAGLASQSHTIANQITVELDGSVVAEKVAEYQFNFNKRMA"
     gene            1995..3287
                     /locus_tag="PXB09_002194"
     CDS             1995..3287
                     /locus_tag="PXB09_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HDL5234267.1"
                     /translation="MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADL
                     EDMGLNTQTIRLQAVFFGSSYYTDYIRLLSVLQQKGADVLVHPIRGRLPNMLLVSANL
                     HTDAENINYVALDLTFKEATEMQPIFAFEDSLISKIDKLLLDLENLFDDGLRFWDSVG
                     VFDLKSRLLGLWGALFASFEAVRNLFDLDKKKYSIASSTSQRTYLRDGSGALNQLKEM
                     VDSGIQGRADLTTLSFKSQLLNITDAIDNTQAIVSKVARDEGFNRSKTVKLLGSDVVE
                     LGIMLDLIATTKLTKVLTELVEEREEELLIGDLELINQIVREHWLNIINKLREQQKNT
                     QKGVPSDKTKVIYETAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKV
                     AHAFYGDYERADELLRLNPHIRQPNFIERGTLLNCYWE"
     gene            3290..4417
                     /locus_tag="PXB09_002195"
     CDS             3290..4417
                     /locus_tag="PXB09_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234268.1"
                     /translation="MENEIVVEIDGSQHKNWKSYDIDSDFLIPADSFNFELGKSSNIE
                     VLPNYSGKTAIVKINGKTVLTGIVDTTHHTISKSGRGFSLNGRDKAAILVDCSAPITN
                     VQGLSLLDAVKKIVTPLGIKEVQLKAEKNPTLSKVDIDVGESAWEAIMRCANSAGLHC
                     WFDPKGVLIVGGADYAQPPVATLYCVKESGDSRKNNFVDATLSYDVSQSYSEVTFLAQ
                     KHGKDSDNAKHDFKWVYKNEEMELYKPKTIVLGDVENLEALMKQAKKQVSDWQLESFN
                     LTIIVPDHKTKDGTLWQAGQRVHVVCEEYDLDGIFFLMGRRFRLSRTGGTTTELRLKL
                     DGVWTPDAYQAKAQEARKRKGKKGRKKKEPVEYVGSWELGK"
     gene            4419..5081
                     /locus_tag="PXB09_002196"
     CDS             4419..5081
                     /locus_tag="PXB09_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5234269.1"
                     /translation="MMRKLAKQTKEVAKGVQDSVRAAFRGVLNLVKSGSDIQQVQVSA
                     LADETIQDLELMQHFGFTSVPPAGTQAVVIPLGGKTTHGIIVATENGSFRVKNLKNGE
                     TAIYDSSGSTIILKNGRVIDIECDSFNIKCKQYSVTASGGANFNTPKLETDQQFVSQG
                     QISGNGGMVVQGGSGASFTGSLTQQGGSISTDGDVVASGKSLVTHQHNEQGDGRPTSA
                     PI"
     gene            5200..5550
                     /locus_tag="PXB09_002197"
     CDS             5200..5550
                     /locus_tag="PXB09_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HDL5234270.1"
                     /translation="MDREISPLTRDYTSENITTLQNAVYIRLTTPKGSWWADGRVGSL
                     LHLIQREKDLSRVGLLAQQYAEEALQPIIDDGRAKSITVTHEQPKDGSLNLLISVIDN
                     RGVKFEFKHPVKLV"
     gene            5563..6624
                     /locus_tag="PXB09_002198"
     CDS             5563..6624
                     /locus_tag="PXB09_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5234271.1"
                     /translation="MYQIPTLEDVRREILRDIQSLEPTADIEVDSDYFVRASALASCV
                     VGLYAHQNWIVRQYFPDTADSEYLEMHAKLRNLYRKNATYASGSLKVFGTAGSVINEG
                     LQVKFGERFYVTKSSDVIGDDGSATVRVISMATGASSNVKSESKAQLTAAPAGVSSDC
                     LLLPDVTGGTEVESDAALLARLLEQIRRPPSGGNKNDFRQWAESVDGVTSAFVYPLRR
                     GEGTVDIAITSGDTVPSDEIVRATQAYIDEVRPVTAKSVYVLKPVEKRVNFNIKVQLD
                     TDTTLDGVKAEIENALENYFLSLKPADTLIISQIEAVISDLVGVVDREIVQPTRNQTI
                     DAYREMGWFRLGDVTVELM"
     gene            6624..7214
                     /locus_tag="PXB09_002199"
     CDS             6624..7214
                     /locus_tag="PXB09_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HDL5234272.1"
                     /translation="MVTINSKHGKALGGLLPPVSYDPNGRWLALSLEVEGRELDRIDA
                     RAKTLIDAVDVSTGIFIDDWERVCGLTANSSLPLETRIERVIAKLNQLGGLSIGYITQ
                     VAKELGYCIKISEPQPFIAGLSRAGDMLWHKDIMWTFFVDICNPTDDYKRFRASVSMA
                     GDALMGRYKDPILESLLEEVKPAFSRVWVRYLGDIE"
     gene            7211..>7530
                     /locus_tag="PXB09_002200"
     CDS             7211..>7530
                     /locus_tag="PXB09_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234273.1"
                     /translation="MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINT
                     QQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKSVA
                     ELRT"
BASE COUNT         2220 a         1395 c         1905 g         2010 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctcgcaa
       61 aatgagctac gccgtgcctc agaagcgact aagcaacgag tccgagagtt aaatgctgaa
      121 ttgggtaaaa ccagttttgg ggataaggca ggaagttttg ggcgtgggtt gatgggtgca
      181 ggggttggaa ttgctgcagg tgcagcaatg gctcgccagc ctgcaagaaa tcaaatggaa
      241 tttgatagac agcttgcaat ggtagcgaat accgcctttt cagatcgtga tgtgaaaggg
      301 cgtattgatg ggaaaagaga gttacttgat gccgtacaga aagcagtaag tgtaggcggt
      361 ggctcaaaag aagaagcgtt gagctcacta gacgctttac ttgcctcagg tgctgtttct
      421 accgaaaccg ctctcaattt actcccaacg ttgcagaaag gtgcggtcgc aacaggggca
      481 agtgcaaatg atatggctca aattgctatt tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg gtcgagtctt agatatggca gttgccgctg ggcaagccgg tagctttgag
      601 cttgcagata tggcaagttg gttgcctcaa caaatggccg ctgcaaaaca agctggctta
      661 agcggcattg agggatttga gcgactttta attgcaaacc aacaggctcg tgtcactgcc
      721 ggtacaagta acgaggctgg taataattta gtgaatctgt tgggtaagat tactgctaaa
      781 gaaactaatg agcgttttaa gaatattgaa tataaagatc cgaaaactgg caaaaccaaa
      841 gcgattgatt ttgcaaaatc tatggagcat tacaagggaa aagggcaaga ttcattgcag
      901 gcttttatgt ctattatgga tgacgttgtc gggagtgata aacgctatca agaactacaa
      961 gctaaactta aaactgctaa aggcgaagag cagaaacgct tattcaatga attaacaaac
     1021 ttagttgaag gtacggcaat tggagaaatt atttctgatc gccaagcatt aatggctcta
     1081 ttagggataa agaataatgt tcaattaggt gaaaaagtac agaaagatat tcagaatagt
     1141 gaaggagctg ttgaaacctc tcacgctgtt attcgggata ctaatgctca taaagttgaa
     1201 tcattaaaaa atacaactga atttgcacaa atgaaaaact ttgaaaaagt aaatggagtg
     1261 ttaggcacat tagctgaatt actgaataaa tacgccaatg aataccctaa cttaactcaa
     1321 tttttaagtg gtgcaacaga tgccgttaaa atttttggag cagctcttgc tgcatcaagt
     1381 gtgcttgatt tattaaccgg taaaaaagac aagggcggac taattggtga tgttttggat
     1441 aaatcatcaa aagctagtgg aggtaaaggt aaggtaggta aattgctttc ggttggtggc
     1501 tcttttgcta gtgttgcagg cgttgccaca atgctacacg gcgaccaagc cccgatgagt
     1561 gaggagcgaa aagcagagtt aagagatcct aattatcaag ctcgtaaaat gtacgagtac
     1621 aaaaaagaga ttttaggtag ccgtttccac tcgttttttc gtagtaatga aacccttgag
     1681 caatatcgga aagatgtgag tgcttatgag gctaagcaaa agaatagcaa tactatggga
     1741 gctgtacaag gggttttaag taccattccg agcttacaag agttacgccc taaagttgat
     1801 tcggttactc aaaccctatc cacctatcaa gccgactttc aggcttttgg ggcaacgatt
     1861 tcagccggta ttgaggcagg gcttgcctcg caatctcata cgattgcaaa tcaaatcacc
     1921 gtggagctgg acggttcggt ggtggctgaa aaagtggctg aatatcagtt taattttaac
     1981 aagaggatgg cgtaatgagc ggttggacaa tgcctattca acaggcgagt tttaaaggtg
     2041 tgcgttttga cgtgcttgca gtggatgata gctttgagcg agcggtagtt gaacacgcct
     2101 acccttttgt aaatggggct gatttagagg atatggggct aaacacccaa actattcggc
     2161 tgcaagcggt cttttttggc tcaagctatt acacggacta tatccgctta ctttcagttt
     2221 tgcagcaaaa aggggctgat gtattagtcc accctattcg tgggcgttta ccgaatatgt
     2281 tactcgtttc ggcgaatcta cataccgatg ccgaaaatat caattatgtt gccttagatt
     2341 tgacctttaa agaggcaacc gaaatgcagc cgatttttgc ctttgaagat tcgctgattt
     2401 cgaaaatcga caagctgcta cttgatctcg aaaacctgtt tgatgatggc ttgcgttttt
     2461 gggatagcgt tggggtgttt gatctgaaat ctcgtttgct tgggctttgg ggggcgttgt
     2521 ttgcctcgtt tgaggcggtg cgtaacctgt ttgacttgga caagaaaaaa tacagcattg
     2581 cctcatcaac ctcacaacgc acctatttaa gagacggttc gggggcattg aatcagttaa
     2641 aagaaatggt ggatagcggt attcaggggc gtgctgattt aacgacactc tcgtttaaat
     2701 ctcagttact caatattact gatgcgatag ataacactca ggcgattgtg agcaaagtgg
     2761 ctagagatga gggttttaac cgctcaaaaa cggttaagtt acttggctct gatgtggttg
     2821 agcttggcat tatgcttgac cttattgcca cgactaagct caccaaagtc ttgactgagc
     2881 tggtagaaga gcgtgaggaa gagctgctaa ttggtgattt agagttaatt aaccaaattg
     2941 tgcgtgagca ttggctgaat attatcaaca aactgcgtga gcaacagaag aacactcaaa
     3001 aaggcgtgcc gagtgataag acaaaagtta tctacgagac cgcagaaaag ctgatcaaca
     3061 atatccgtaa tgttgcccat cagtttactg cacttgtgct tgcggtaatt aataaaaaac
     3121 cgcctttgac cgtgcgaatg gtaatggata gcggcacaat ccataaagta gctcacgcct
     3181 tttatgggga ttatgagcga gcggatgagc tattacgtct taatccgcat attcgccagc
     3241 caaactttat tgagcgaggc acgctgttaa attgttattg ggagtaaaaa tggaaaatga
     3301 aattgtggtg gagattgacg gctcgcagca taaaaactgg aaaagttatg atattgacag
     3361 cgatttttta attcctgctg atagttttaa ttttgagttg ggtaaatcta gcaatataga
     3421 ggttttacct aattattcgg gcaaaacggc aatagttaaa atcaatggca aaacggtgct
     3481 cactggcatt gtggatacca cacatcacac cattagcaaa agcgggcgtg ggtttagcct
     3541 aaatggacgt gataaagccg ctattttggt ggattgctct gccccgatta ccaatgtgca
     3601 agggctctct ttgcttgatg ctgttaaaaa aattgtaacc cctcttggga ttaaagaggt
     3661 gcaactgaaa gccgagaaaa acccgacttt aagcaaggtg gatattgatg tgggtgaatc
     3721 ggcgtgggag gcgattatgc ggtgtgccaa ctcggcaggt ttgcattgtt ggtttgaccc
     3781 caaaggcgtg ttaattgtcg gcggtgcgga ttacgctcaa ccgcccgttg ccacgttata
     3841 ttgcgtgaaa gagtcggggg atagccgtaa aaataacttt gttgatgcaa cactttctta
     3901 tgatgtgtcg caaagctatt cggaggtcac ttttcttgct caaaaacacg gcaaagattc
     3961 tgataatgcc aagcacgatt ttaaatgggt gtataaaaat gaggaaatgg agctttataa
     4021 accgaaaact atcgtgctgg gcgatgtgga gaacctcgaa gccttgatga aacaggcgaa
     4081 aaaacaggta tcagattggc agttggagtc atttaacctc acgattattg tacctgacca
     4141 taaaaccaaa gacggcacgt tgtggcaagc tgggcaacgt gtgcacgtgg tatgtgagga
     4201 gtatgattta gatggtattt tctttttaat ggggcgacgt tttcgactct ctcgcacggg
     4261 tggcacaacc accgaattgc ggttaaaact ggatggcgtg tggacacctg atgcttatca
     4321 agctaaagca caagaggctc gcaagcgtaa aggcaaaaaa ggacgtaaga aaaaagagcc
     4381 tgtagaatat gtaggctcgt gggagttggg aaaataatat gatgagaaaa ttagcaaaac
     4441 agactaaaga ggtggcaaaa ggtgtgcaag atagcgtgcg tgctgctttt agaggggtat
     4501 taaatttagt caagagtggc agtgatattc agcaggtaca ggtgtccgct ttagcggacg
     4561 aaactatcca agatttagag ctaatgcagc attttggttt cacttccgtg ccacctgccg
     4621 gcacgcaagc ggttgttatc cccttaggtg gtaaaaccac gcacggtatt attgtggcga
     4681 ctgaaaacgg ctcgtttagg gttaaaaatc taaaaaatgg tgagacggct atttatgatt
     4741 caagcggctc aactatcata ttaaaaaacg ggcgagtgat tgatattgag tgcgatagct
     4801 ttaacattaa atgcaagcaa tattccgtca ccgcaagcgg tggagcaaat tttaacaccc
     4861 cgaaactaga aaccgaccag cagtttgtgt ctcaagggca gatcagcggc aacggtggaa
     4921 tggtagttca aggcggaagt ggtgcaagtt tcactggctc attaacacaa caaggaggca
     4981 gtatctcaac tgatggtgat gtggtggcat cgggtaaatc actggttaca catcaacaca
     5041 acgaacaagg cgatggcaga cctacctctg ctccaattta acttacaagc taatttacaa
     5101 gcggtctaat tttgcaaatt ttttgtagaa aaagaccgct tgccatttgt ggaagtctct
     5161 ccccgttact cctgtcttta atgtctctac catagcaata tggacagaga aatcagcccg
     5221 ctcactcggg actatacaag tgaaaatata actacactgc aaaatgccgt gtatatcaga
     5281 ctaactactc cgaaaggctc gtggtgggca gatgggcgtg taggttctct gctccatctt
     5341 attcaacgtg agaaagattt aagccgtgtg gggctattag ctcaacagta cgccgaagag
     5401 gctttgcagc cgattattga tgacggacga gccaaaagca ttacggtgac acacgagcag
     5461 ccaaaagacg gctcgttaaa tcttttaatc tccgttattg ataatcgtgg ggttaaattt
     5521 gagtttaaac accctgtaaa actggtttag gtggttttta aaatgtatca aatcccaacg
     5581 cttgaagatg ttagaagaga aattctgcga gatattcaat ctttagagcc aactgctgat
     5641 attgaggtgg attcggatta ttttgttcgt gcctccgctt tggcaagctg tgtggtgggg
     5701 ctgtatgctc accaaaactg gattgttcgt cagtatttcc cagatacggc agactccgaa
     5761 tacctcgaaa tgcacgctaa attgcgaaat ctttaccgta aaaatgcgac ctatgcgagt
     5821 ggttcgttga aagtttttgg tactgctggc tcagtaatca atgagggctt gcaagttaaa
     5881 tttggcgagc gtttttatgt aaccaaaagc tcggacgtta ttggtgatga tggctctgca
     5941 acggtgcgag tgatttcaat ggcaacaggg gcatcaagca atgttaaatc tgaaagtaaa
     6001 gcacaactga ctgctgctcc tgctggcgta tcaagcgatt gcttgttatt gcctgatgtg
     6061 acaggcggga cggaagtgga aagcgatgcg gcattgctgg ctcggttatt agagcagatt
     6121 cgccgaccac cgtcaggcgg gaataaaaat gacttccgcc aatgggcaga aagcgttgat
     6181 ggcgtaacct ctgcgtttgt ttatccatta cggcgtggcg agggtacggt agatattgca
     6241 atcacctcag gtgataccgt gccaagtgat gaaatcgtgc gagcaactca agcttatatt
     6301 gatgaagtcc gccctgttac ggctaaatcg gtttatgtac ttaagccagt tgaaaaacgg
     6361 gtcaatttta acatcaaagt gcaacttgat acggatacga cgcttgatgg tgtaaaagcg
     6421 gaaatcgaaa acgctttaga gaattatttt ttatcactca aacctgctga caccttaatt
     6481 atttcgcaaa ttgaggcagt aattagtgat ttagtgggcg tagtagatcg tgagattgta
     6541 cagccaacca gaaaccaaac gattgatgcc taccgtgaaa tgggctggtt cagattgggt
     6601 gatgtaactg tggagttgat gtgatggtaa cgattaactc taaacacggc aaggcattgg
     6661 gcggtttatt accgcctgta tcgtatgacc caaacggcag atggctagcg ttatcccttg
     6721 aagttgaggg gagagagcta gaccgcattg atgcgagagc caagacttta atcgatgccg
     6781 ttgatgtatc aacaggcatt tttattgatg attgggagcg ggtttgtggc ttaacggcga
     6841 atagctcact accgcttgaa acccgaattg agcgtgtgat tgcaaagctg aatcagttgg
     6901 gtggattgtc gataggctat atcactcaag tggccaaaga gcttggatat tgcatcaaaa
     6961 ttagtgagcc acaacccttt attgctgggc taagccgagc tggggatatg ttatggcata
     7021 aagacattat gtggacattt tttgtggata tttgcaaccc cacagatgat tacaagcgtt
     7081 ttagagcaag tgtgtcaatg gctggcgatg cgttaatggg acgatacaaa gacccaattt
     7141 tagaaagtct acttgaagag gtaaaacctg catttagccg tgtgtgggta agatatttag
     7201 gagatattga atgaaacaag tgatgaatcc gattaatacc ccaacacagc gttttaaaga
     7261 tggcaaccct gccactggtg aatatggcac gattgtgact gctgaatttt tgaataacgt
     7321 ccaagattcg gtcattaaca cccaacaaga attgcacagt gtacttgctg aagcaggaat
     7381 cgaagcaaat gacgaacaag ttaatcaggt ggctaaagca atcaagaaaa ttgcgggcga
     7441 tgctactcgt gataatttta acgcattagc caaccctgat ggttacaaac acatcggtcg
     7501 ctgcaaatcg gttgcggagt tacgtactat
//
LOCUS       DANLTI010000124         7452 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.125, whole genome shotgun sequence.
ACCESSION   DANLTI010000124 DANLTI010000000
VERSION     DANLTI010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7452
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.125"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            153..1484
                     /gene="pcnB"
                     /locus_tag="PXB09_002201"
     CDS             153..1484
                     /gene="pcnB"
                     /locus_tag="PXB09_002201"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDL5234274.1"
                     /translation="MLHKKFAVNASQYRISPKDFPKNAISIVDKLQIAGYEAYIVGGC
                     IRDLLLEKKPKDFDIATNARPEEIQRIFGRQCRLIGRRFRLAHIVYGREIFEVATFRA
                     GHESHRNDKISKVSDEGMLLRDNVYGTLREDAERRDFTVNALYYDIKRNLIFDFFNGI
                     EDLRAGKLSLIGEPTIRYQEDPVRMLRAVRFMAKLDMFLDKATASPIRDMAVLLTNIP
                     AARLFDESLKLLQTGAGLKTYQLLREYELWQFLFPVLPAFFTAKGDSYAERMITKALN
                     STDERIADKLPVNPAFLFAALLWYPLREKMEQLKNEGGFNSYDAMMLAANDVLAESCN
                     AIALHRRHTSVIRDIWALQFQMMKRSGNRPQQTLEHVKFRAGFDLLVMRAEIEGGDLV
                     ELSAWWHEYQFSNEGQRTELLKSVRHLGNVPSEKKKTRRRRTFKKKPKVNG"
     gene            1687..2160
                     /gene="folK"
                     /locus_tag="PXB09_002202"
     CDS             1687..2160
                     /gene="folK"
                     /locus_tag="PXB09_002202"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDL5234275.1"
                     /translation="MQTVYIALGSNLENPLEQLKQAVEKLKKFANEFEISPFYGSKPV
                     GPQDQPDYVNAVAKFSTDLSPTALLDKLQSIENEQGRVRVRRWGERTLDLDIILYGNQ
                     QIQTERLNVPHIEMKNREFVIVPMFDLTPDLVLPTGEKLADIYAQFKDHQMIIFS"
     gene            complement(2157..2351)
                     /locus_tag="PXB09_002203"
     CDS             complement(2157..2351)
                     /locus_tag="PXB09_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDL5234276.1"
                     /translation="MKPATFYFAIFLLNLTACTPKVQLETPSEGITINMNVVVDHRID
                     VKMDEKSRAVITKSENKTKN"
     gene            complement(2369..4144)
                     /locus_tag="PXB09_002204"
     CDS             complement(2369..4144)
                     /locus_tag="PXB09_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HDL5234277.1"
                     /translation="MPLKTAIRISLLSQNSWGKGNIVISNSDGEITEKGLNLPLRLTG
                     NIKHGNFILYSSVPLDFQGNFDDLSVKFLPSSLLRLTGKERYLTIEDLRFPLAGIKID
                     KHGIHGRLHAILRGQSPDFNNIEFHLDGQAQNFKAGALDFFQDPKDANAVKDSWKWRI
                     WGASILKAFNSKVNLSGRGQWHKQLVRLEELKGDLATVKLADTTISKITLNNTQAIRF
                     NVKKFTLDGAVMLQSPEIAFSYGGVLPKPRVNLAFDGEVEKLRFKGAVNTTELGPLKL
                     FARRQLSQDASQIIGKLYWPEQSAQGFQPLFPFRSQWVINNGTIRGETAFSAGSKNGL
                     IAGGHLAIRNGGLSLPNGEAKGIEFSLPYRYQNGRFHFGAKKPLDVKIAQIKLGDLAL
                     DNASMKLNGYYPYTKAKPLNLNQLSFDLFGGKLNVKRFALPQTELAYLNLERIDFEQI
                     LQFMQYQQIDLKGKANAILPFWLSGKPCYICDGLLTQAETSYLTFTPELLSEMQKSGY
                     TEQILLHLVDKSTINDFRSLINVGPKGDLVLDGKLKLSSNQNKSKVNLNYNHRENLFD
                     LWHLINYGSQFEQKLENYLYQKLER"
     gene            complement(4330..5076)
                     /locus_tag="PXB09_002205"
     CDS             complement(4330..5076)
                     /locus_tag="PXB09_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234278.1"
                     /translation="MKRALKFFGIATVLSVVAIYYFLMPSHYLATPINWILPKAWKVQ
                     LPQGLNLNWQGSSLAQFQLSYRDCPLLSADKTDLGWIEKNHLSVDKLDIDYRCLALFP
                     QNEHSNSDTSLNALLAVIPDGEATIHALNWKNLPTDFNPRLQRLFEQTAIKLSLSKGE
                     IQATAAQQAVKFAANFANGRLNADLSYQPNEKEQHNLRISAEIEDNFTQLPPTISAEY
                     DWQLSYEIIANKALQKGALFSVGKKMPHKS"
     gene            complement(5080..5895)
                     /locus_tag="PXB09_002206"
     CDS             complement(5080..5895)
                     /locus_tag="PXB09_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234279.1"
                     /translation="MAHDHDSPSKLEISTHAALPMVLMLFIEMALNFYSAPKNSIFIS
                     PYLLAFFVTSLISFLVLWKGEICRGQASRLSFILPFLLIFAVGNFLYSIGFTPKHNPM
                     AVASIAAVFACLIYFRLPEDQTLYNTLMYCGLAISSIGIIQYLAIYWFELPSLFNGIR
                     ANNFAQVLLGILLAGWYLMLAKSRLDVFLKLLVKTALVVLILNYCWTAFVLYQHLQIM
                     PDMPLLSFIIYFAAQFVILLMLAWLLLGKNIKNPTAWTVATLLAILYPFANVV"
     gene            5985..6392
                     /gene="gloA"
                     /locus_tag="PXB09_002207"
     CDS             5985..6392
                     /gene="gloA"
                     /locus_tag="PXB09_002207"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDL5234280.1"
                     /translation="MRILHTMLRVGDLERSIKFYTDVLGMRLLRRSENEQYKYSLAFL
                     GYADESESAVIELTYNWGVDKYELGTAYGHIALGVDDIYKTIEDVRAAGGKITREPGP
                     VLGGTTVIAFAEDPDGYKIEFIENKDAKAALGN"
     gene            6477..7124
                     /gene="rnt"
                     /locus_tag="PXB09_002208"
     CDS             6477..7124
                     /gene="rnt"
                     /locus_tag="PXB09_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDL5234281.1"
                     /translation="MEQTTEQIDYKLLKHRFRGYLPVVIDVETAGLNAQTDALLELAA
                     ITLKMDEQGYLVPDQQCHFHIAPFEGANINPESLKFNGIDIDNPLRGAVAENIAIPEM
                     FKMVRKAMKEQGCQRAVIVAHNAAFDQGFLQAAIKRINAKRDPFHPFAMFDTATLAGF
                     MYGQTVLVKACQVAKIPFDGKQAHSALYDTERTAELFCAMVNRLKDLGGFPPLSD"
BASE COUNT         2208 a         1436 c         1646 g         2162 t
ORIGIN      
        1 aaaagtcggc tcagaaaaat gaaaaggtag agagtgaaaa aagagcggaa agagaaccca
       61 aaacttcccg ttctaaacgc ccagccccga acttaacgga ccaaaagact tatagaggtg
      121 ggaagaaaca acaagataat cctccctccc atttgttaca caagaaattt gcggtgaatg
      181 ccagccaata tagaattagc ccgaaggatt ttcctaaaaa tgcgatttcg attgtcgata
      241 aattgcagat tgccggttat gaagcttata ttgtgggtgg ctgtattcga gatctactct
      301 tggagaaaaa gcctaaagat ttcgatattg cgactaatgc gagacctgaa gaaattcagc
      361 gtatttttgg taggcaatgc cgattaatcg gacgtcgttt ccgtttggca cacattgttt
      421 acgggcgtga aatttttgaa gtggcgactt tccgtgcagg acacgaatct catcgcaatg
      481 acaaaatttc taaagtcagc gatgaaggaa tgctactgcg tgataatgtt tacggcacgc
      541 tccgtgaaga tgcagagcgc cgtgatttca ccgtaaacgc cttatattac gatataaaac
      601 gcaatcttat ttttgatttc ttcaacggta ttgaagactt acgagcaggt aaactttcgc
      661 ttatcggaga gcctactatt cgttaccaag aagatccggt gagaatgttg cgagccgttc
      721 gttttatggc gaagttggat atgttcttgg ataaagccac ggcctcccca attcgggata
      781 tggcggtgtt gttaaccaac attccggcag cccgtttgtt tgacgaatca ctcaaattat
      841 tacaaaccgg tgcagggctg aaaacttatc agcttttgcg tgaatatgaa ctatggcaat
      901 tcttgtttcc ggtattgccg gcatttttta ctgccaaagg tgattcctat gccgaaagaa
      961 tgattaccaa agcgttaaat tcaactgatg agcgaattgc cgataaatta ccggtaaatc
     1021 ctgcgttttt atttgctgca ctactttggt atccgctccg ggagaaaatg gagcagctta
     1081 aaaacgaagg tggcttcaac agctacgatg caatgatgct ggcagcaaat gatgtgctgg
     1141 cggaaagttg caacgcgatt gcgttgcacc gcagacacac ttcagtcatt cgagatattt
     1201 gggcattgca atttcagatg atgaaacgaa gtggcaaccg accgcaacaa acccttgaac
     1261 acgtcaaatt ccgtgcaggg tttgatttat tagtgatgcg tgcagaaatt gaaggcggcg
     1321 atttggtcga actttccgct tggtggcacg aataccaatt tagcaatgaa ggtcagcgta
     1381 ctgaattgct gaaatcggtt cgtcatttag gcaatgtgcc tagcgagaaa aagaaaacac
     1441 gccgccgtag aacctttaag aaaaaaccga aagtaaatgg ataattaata tatttccctc
     1501 tccccttgtg ggagagggag cgatttttct tcgttcagaa gaaaaatcag ggagagggga
     1561 aatgtgtaaa aaatttaata aaagttaccg cttgtcccct ctctctgctt atttcgctga
     1621 acgctcataa gcggtctctc tcccacaagg ggagagagtt tattgttata tttgtaagta
     1681 tattttatgc aaaccgtcta tatcgcctta ggatcaaacc ttgagaatcc gcttgagcag
     1741 cttaaacaag cggtcgaaaa attaaaaaaa tttgcaaatg agtttgaaat cagcccgttc
     1801 tacggctcaa agcctgtcgg accgcaagat cagcctgatt atgtcaatgc ggtagcaaaa
     1861 tttagtaccg acctatcgcc cactgcattg ctggataaat tgcaaagcat tgaaaatgag
     1921 cagggaagag tgcgtgtacg ccgttggggg gagagaactt tagatctgga tattattttg
     1981 tacggcaatc agcaaattca aaccgagcgt ttgaacgtgc cgcatatcga gatgaaaaat
     2041 cgggaatttg tgattgtgcc gatgtttgat ttaacgcctg atttagtact accgacaggg
     2101 gaaaaattag ccgatattta tgcacaattt aaagatcatc aaatgattat cttcagctaa
     2161 tttttcgttt tgttctcact tttggtgatc accgctcggg atttctcgtc catcttcaca
     2221 tcaatgcggt gatcaacgac cacattcata ttaatcgtaa tgccttcact tggcgtttca
     2281 agctgtactt tcggcgtaca agcggtcaaa ttcagtaaaa atattgcaaa ataaaatgtg
     2341 gccggtttca tatttattcc attctttatc atcgttccag tttttgatag aggtaatttt
     2401 ctaatttttg ttcaaattgt gagccatagt taattaagtg ccacaaatca aacagatttt
     2461 ctcggtgatt atagtttaaa ttcacttttg atttattttg attggaagat aattttaatt
     2521 ttccgtctaa tactaaatcg cctttcggcc cgacattaat cagactgcga aaatcgttaa
     2581 tcgtgctttt atctactaaa tgtaacaaaa tttgctcggt gtaaccactt ttctgcattt
     2641 ctgacaacaa ttcaggggta aaggttaaat aggaagtttc cgcctgtgtc agtaagccat
     2701 cgcaaatata gcaaggtttt ccgcttaacc aaaacggcaa gatagcgttg gctttgcctt
     2761 tgagatcaat ttgctgatat tgcataaatt gcaaaatttg ctcaaagtca atccgctcta
     2821 aattcaggta agccagttcg gtttgtggta aggcaaagcg ttttacattc agtttaccgc
     2881 caaacaaatc aaaggataat tgatttaaat tcaatggctt agctttggta taagggtagt
     2941 aaccgttgag tttcattgaa gcgttatcta atgctaaatc ccccagtttg atttgggcaa
     3001 tttttacatc aagcggtttt ttggctccga aatgaaagcg tccgttttgg tagcggtagg
     3061 gaagcgaaaa ttcaatccct tttgcttcgc cattaggtaa agataaaccg ccgttacgaa
     3121 tggctaaatg cccaccggca atcagcccgt ttttactgcc ggcactaaac gccgtttcgc
     3181 cccgaattgt accgttgttg atcacccatt ggctacgaaa cggaaaaagc ggctggaagc
     3241 cttgagcaga ttgctccggc caataaagtt tgccgataat ttggctggca tcttggctta
     3301 attggcggcg ggcgaacagt ttgagtgggc cgagttcggt ggtattcacc gctcctttaa
     3361 aacgtagttt ttcgacttca ccatcaaagg cgagattcac tcgtggtttg ggtagcacac
     3421 cgccataact gaaggcaatc tcaggtgatt gcaacattac cgctccgtca agggtgaatt
     3481 ttttgacatt aaatcgaata gcttgcgtat tgttaagcgt gattttagaa atggttgtat
     3541 ctgctaactt tacggtggct aaatcgcctt tgagttcttc caaccgcaca agctgtttat
     3601 gccattgccc tctgccgctt aaattcactt tactgttgaa ggctttgagg atagatgctc
     3661 cccaaattcg ccatttccaa ctgtctttta ctgcgttagc atctttagga tcttggaaaa
     3721 aatctaaggc tccagcctta aaattttgtg cttgtccgtc taaatggaac tcgatattgt
     3781 taaaatcagg gctttgccct cttaaaattg cgtgcagtcg tccgtgaata ccgtgcttgt
     3841 caattttaat tccggcaagt ggaaaacgta aatcttcaat ggttaaatac cgctcttttc
     3901 cggtcaaacg aagtagggag ctaggcaaaa attttacgct taaatcgtca aaattacctt
     3961 gaaaatccag tggcacgcta ctgtaaagaa taaaattgcc gtgtttgata ttacccgtca
     4021 aacgaagcgg taaattcagc cctttttcgg ttatttctcc gtctgaattg gagattacaa
     4081 tattgccttt accccaactg ttttgggaaa gcaggctgat acgaatcgcc gttttgagtg
     4141 gcaaaaagcc gttttggttg aatgatttcg gtgtgagctt ggtgctaaca aacccttgca
     4201 gtggaaattg ttgggtaaag tgccaatcaa accgcccttg ttgaatttct aggctttccc
     4261 catcaaacag aaaagggaaa tccagtttgt tattttcact ttcggcaagt tcaacctgcc
     4321 agttgccttc taacttttgt gcggcatttt tttgccaact gagaatagag cgcccttttg
     4381 caaggcttta ttggcgatga tttcataaga taattgccaa tcatattcag cggaaatagt
     4441 gggcggcagt tgggtaaaat tgtcctcaat ttctgctgaa atcctaagat tatgctgttc
     4501 tttttcattc ggttgatatg ataaatcggc attcaaccgc ccatttgcaa aatttgctgc
     4561 aaatttgacc gcttgttgag cggcagttgc ctgaatttca ccttttgaaa gtgagagttt
     4621 aatagctgtt tgctcaaaaa gccgctgaag tcttgggttg aaatcggtag gcaaattttt
     4681 ccagttaagg gcgtggatag tcgcttcgcc atcaggaatg accgccagca atgcgttgag
     4741 tgaagtgtcg gaattgctgt gttcattttg tggaaacaag gcaaggcagc ggtaatcaat
     4801 atccaattta tcgacagaaa gatggttttt ctcaatccaa cccaaatcgg ttttatcggc
     4861 acttagtagc gggcaatctc gataagagag ttgaaattga gcaagtgatg agccttgcca
     4921 attcaggttt aagccttgtg ggagttgaac tttccacgct ttcggcaaaa tccagttaat
     4981 cggcgtggca agatagtggc tgggcattaa aaaatagtag attgccacaa cagatagaac
     5041 ggttgcaatg ccgaaaaatt ttaatgcccg tttcataaat cagactacat tagcgaaagg
     5101 gtataaaatc gctaacagcg tagcaactgt ccaagcggtc ggatttttga tgttttttcc
     5161 aagtaataac cacgccaaca tcaataaaat cacaaattgt gctgcaaaat agatgataaa
     5221 tgaaagcaat ggcatatccg gcataatttg tagatgttga taaagcacaa aagctgtcca
     5281 gcaataattg agaatcagca ccacaagggc ggttttcacc aacagtttga ggaaaacatc
     5341 taaacggctt ttcgctaaca ttaaatacca gccggctaat aaaatgccta acagcacttg
     5401 ggcgaaattg ttggctcgaa tcccgttaaa caatgaaggc agttcaaacc aataaatggc
     5461 taaatattgg ataataccaa tacttgatat agccaaacca caatacatca atgtgttata
     5521 taaggtttga tcttccggca ggcggaagta gattaagcag gcaaaaactg cagcaatgct
     5581 tgccaccgcc attgggttat gctttggcgt aaagcctatg gaataaagga aattccctac
     5641 ggcgaaaata agtaaaaagg gtaaaataaa gcttaaacgg ctggcttgcc ctcggcagat
     5701 ttcgcctttc catagcacta aaaaactgat taatgaggtc acgaaaaacg ccaataagta
     5761 aggagaaata aaaattgaat ttttcggtgc agagtagaag ttaagagcca tttcaataaa
     5821 cagcattaat accattggca gtgcagcgtg ggttgaaatt tcaagttttg acggcgaatc
     5881 gtgatcgtga gccatagata atcccaaaag gtataaagaa aatgatttta agccaagatt
     5941 atgccataat aggggtcgtt ttttaacttc agggggaaga aaatatgcga attttacata
     6001 caatgttacg agttggagat ttagagcgct caattaagtt ttataccgat gtgttaggta
     6061 tgcgtctgtt acgtagaagc gagaacgagc agtataagta ttcgttagca tttttaggct
     6121 atgccgatga aagcgaaagt gcggtgattg agctgactta taactggggt gtggataaat
     6181 atgagctagg cacggcttat ggccatattg cgttaggcgt agatgatatt tacaaaacca
     6241 ttgaagatgt gcgtgcggca ggcggtaaaa ttacccgtga gccgggcccg gtattgggtg
     6301 gaacaactgt gattgccttt gctgaagatc cggacggtta taaaatcgaa tttattgaga
     6361 ataaagatgc gaaagcagcg ttaggaaact aatttttgcg aatatgaata ttcaagcggt
     6421 cggatttgta aaaaattttg caaatcagac cgcttgtatt ttaggttgat agataaatgg
     6481 aacagacaac ggaacaaata gattataaat tattaaagca tcgttttcgt ggctatttac
     6541 cggttgtgat tgatgtggaa acagcaggct taaatgccca aactgatgcc ttattggaat
     6601 tggcggcaat tactttaaaa atggacgagc aaggttatct agtgccggat caacaatgcc
     6661 attttcatat tgcgccattt gaaggggcga atattaaccc tgagtcatta aaattcaacg
     6721 gcattgatat tgacaaccct ctaagaggag cggttgcgga gaatattgcg attccggaaa
     6781 tgttcaaaat ggttcgcaaa gcaatgaagg agcaaggctg ccaacgggcg gtgattgttg
     6841 cccacaatgc agcgttcgat cagggctttt tacaggctgc gattaaacga attaatgcca
     6901 agcgagatcc ctttcaccct ttcgcgatgt ttgacaccgc cacccttgcc ggttttatgt
     6961 atgggcaaac cgtgttggta aaagcctgcc aggtggcaaa aatcccgttt gacggtaagc
     7021 aagcgcattc tgcgttgtat gataccgagc gcacggcaga acttttctgt gcaatggtca
     7081 atcgtttaaa agatttaggt ggtttcccac cattatcgga ttaacgttat tcatttcatt
     7141 tattaacaca atttctcgta ttgtttctat aaattatcct gggagtgatg atagttagtg
     7201 gcaagtacca ttctgcaata aatccagccc tgtagagttg tagaaaaaat aaaaaactat
     7261 ctatcttcag ttaagattac aagcggttgg ttttttaacc aaatttggca aaaatgtgac
     7321 aaaatagacc gcttgtattc aataacaata gactattttt tggctataag cactttctgt
     7381 atacccgcta tttcgaccct ccttattttt tatctaatct aaaaacaagc gtttccacct
     7441 tgaaatgatt aa
//
LOCUS       DANLTI010000125         7414 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.126, whole genome shotgun sequence.
ACCESSION   DANLTI010000125 DANLTI010000000
VERSION     DANLTI010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7414
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.126"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            10..528
                     /locus_tag="PXB09_002209"
     CDS             10..528
                     /locus_tag="PXB09_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HDL5234282.1"
                     /translation="MQKKLFIAQIKQNLSELNVFSTDNIFLNSPYFSQQTGLVSVFIA
                     EIEKTVELLLNQTEVLYSEFYAEKLVKQVDALKNAVEKIQSKPESAQFHSSYQFSPNI
                     HRLAPNKRLQEYRKALRALNEKISWLVEQNLNTQNEATKQTLQNQITETEYRKMKCLK
                     AIEDLEQELLFK"
     gene            complement(532..605)
                     /locus_tag="PXB09_002210"
     tRNA            complement(532..605)
                     /locus_tag="PXB09_002210"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(571..573),aa:Cys,seq:gca)
     gene            complement(621..696)
                     /locus_tag="PXB09_002211"
     tRNA            complement(621..696)
                     /locus_tag="PXB09_002211"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(661..663),aa:Gly,seq:gcc)
     gene            complement(906..2330)
                     /gene="lpdA"
                     /locus_tag="PXB09_002212"
     CDS             complement(906..2330)
                     /gene="lpdA"
                     /locus_tag="PXB09_002212"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDL5234283.1"
                     /translation="MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGI
                     CLNVGCIPSKALLHVAKVIEEAKNAVHNGVTFGEPTIDLDQVRAGKEAVVSKLTGGLA
                     GMAKARKVTVVEGLAAFTGPNTLVARDRDGNPTTITFDNAIIAAGSRPIQLPFIPHED
                     PRVWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKD
                     VVAIYTKQIEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPN
                     GKLIDAGKAGVEVDERGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGMKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASEC
                     SEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNAKAKKR"
     gene            complement(2530..4440)
                     /gene="aceF"
                     /locus_tag="PXB09_002213"
     CDS             complement(2530..4440)
                     /gene="aceF"
                     /locus_tag="PXB09_002213"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDL5234284.1"
                     /translation="MSKQINVPDIGSDEVSVTEVMVKVGDTISVDQSIINVEGDKASM
                     EVPAPEAGVVKEVLVKVGDKVSTGSPMLILESADAAPAQEAPKAEAAPAAPVATTSAV
                     VEVNVPDIGGDEVNVTEIMVKVGDSVEVDQSIINVEGDKASMEVPAPVAGVVKEILIN
                     VGDKVSTGKLIMKFETASAATAQSTPVAEAAPAQASASAIKDVNVPDIGGDEVNVTEI
                     MVKVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMKFEVAG
                     AAPAPAAAQAASAPAPAPQAAAPAKADAAPAGQNQSGLSQEQVVASAGYAHATPVIRR
                     LAREFGVNLDKVKGTGRKGRIVKEDIQAYVKTAVQVFEKQGGTAAAATGAANGAGLGL
                     LPWPKVDFSKFGEVEEVELSRINKISGANLHRNWVMIPHVTHFDRTDITELENFRKEQ
                     NKEAEKRKLDVKITPVVFIMKAVASALEAFPRFNSSISEDAQRLTLKKYINIGVAVDT
                     PNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTH
                     FTPIVNAPEVAILGVSKSEMQPIWNGKEFEPRLMLPLSLSFDHRVIDGADGARFLSYI
                     NSVLADIRRLVM"
     gene            complement(4644..7301)
                     /gene="aceE"
                     /locus_tag="PXB09_002214"
     CDS             complement(4644..7301)
                     /gene="aceE"
                     /locus_tag="PXB09_002214"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDL5234285.1"
                     /translation="MSENLRNDVDPIETQDWLASLDSLIREEGLERAQFIIEQVISQA
                     RAGGVALPTGVTTDYVNTIPVSEQPAYPGDHKIERRIRSAVRWNAIAAVLRSQKKDLD
                     LGGHISTFQSAATMYEVCFNHFFKAPTEKDGGDLVFFQGHAAPGMYGRAFLEGRITAE
                     QMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKD
                     TSAQKVYAFLGDGEMDEIESKGALSFAGREKLNNLIFTISCNLQRLDGPVNGNGKIVQ
                     ELEALFTGCGWEVIKVLWGSGWDKLLEKDTSGKLKQLMMEVLDGDYLTFKSKNGAYVR
                     EHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKG
                     YRIPEAESKNTAHQSKKMSLDSLKGFRDYFELPLTDEQVESLEYVRFPEGSEEYNYLH
                     GQRKALNGYVPVRKPKFTVDFKVPELSEFQALLDEQPRGISTTMAFSRVLNTLLKDKN
                     IGQQIVPIIADEARTFGMEGLFRQIGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEG
                     INELGATASWVAAATSYSVSNLPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMIGG
                     TSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPAFAFEVAVIVQDGIRRMYGENQED
                     IFYYITTLNEITEQPAMPAGAEEGIRKGLYKFETVEGKGKGHVQLLSSGAIMRHVRAA
                     AQILANDYGITADVFSAPSFNELGRDGADVARWNLLHPTETPRVPYVAQVLQDLPTVA
                     STDYMKMYAEQIRAYVPSKHYHVLGTDGFGRSDSRANLREHFEVDERYVVVAALAQLA
                     KEGTVENKVVAEAITKFGLNVDRINPLYA"
BASE COUNT         2108 a         1678 c         1387 g         2241 t
ORIGIN      
        1 acatcaacca tgcaaaaaaa actttttatc gcccaaataa aacaaaacct ctcggaatta
       61 aatgtatttt caacggataa tatttttctg aattcaccct atttctcaca gcaaaccggt
      121 ttggtgagtg tgttcattgc tgaaattgaa aaaacagttg agctattatt gaaccaaact
      181 gaggtgttat atagtgaatt ttacgctgaa aaattggtta aacaagttga tgcattaaag
      241 aatgccgtag aaaaaatcca aagtaagcca gaatcagctc aattccattc ttcctatcaa
      301 ttttctccaa atattcatcg tttagcgccc aacaaacgct tacaagaata ccgtaaagcg
      361 ttacgtgcat tgaacgagaa aattagctgg ttagttgagc aaaatttaaa tacgcaaaat
      421 gaagcaacta aacaaaccct gcaaaatcaa attacagaga cagaatatcg caaaatgaaa
      481 tgtttaaaag caattgaaga tttagaacaa gagttgctat ttaaatagtg atggaggcgt
      541 gtcccggagt cgaaccgagc tacatggatt tgcaatccag tgcataaccg ctttgctaac
      601 acgccataag atttggaaat tggagcggga aacgaggctc gaactcgcga ccccgacctt
      661 ggcaaggtcg tgctctacca actgagctat tcccgcatct gaattcccac aacattgcgc
      721 tgtggaacga ggtgcatttt acggatttat cattttatgt caatgctaaa tttaacattc
      781 tagattcaaa tgctgaaaaa aaactcacta ttcaatagtt tagttttaaa aataatcaag
      841 cggttgtatt ttgcaaaaaa tttacaaaat acaaccgctt attttttaga gattaaataa
      901 tctgattaac gctttttggc tttcgcattt ggtaagtctg taattgaacc ttcaaatact
      961 tctgccgcta atcctaccga ttcgtgtaac gttgggtgag catgaatggt taatgcgata
     1021 tcttcagcat cacagcccat ttcgattgca agaccgattt cgcctaataa ttcgccacca
     1081 ttgctaccaa caatcgcacc acctaataca cggtgagtat ctttatcaaa aattaacttg
     1141 gtcatacctt ctgagcattc agaagcaatc gcacgacctg aagcagccca agggaatttc
     1201 gccacttcgt agttcaagcc ttcttgttta cactctttct cagttttacc aacccaagcc
     1261 acttctggtt cagtataagc gatggacgga atgactttcg gatcgaagta atgtttcatt
     1321 cctgcaatca cttctgctgc cacgtgtccc tcgtgtacac ctttgtgagc taacatcggc
     1381 tggccgacaa tatcaccaat agcaaagatg tgtggcacat tggtacgcat ttgtttatct
     1441 acacgaataa agccacgctc atctacttcc actccagctt taccggcatc aattaattta
     1501 ccgtttggca cacgtccgat agcgactaat accgcatcat aacgtttagt atcgttgcaa
     1561 gccttacctt ccattgatac atagataccg tcatctttag cttctactgc ggttactttg
     1621 gtttcaagca ttagcttgaa ttttttctcg atttgtttgg tgtaaatcgc tacaacatct
     1681 ttatctgcag caggaattac ttggtcgaac atttcaacca cttccacttc tgaaccaagc
     1741 gcgttatata ccgttcccat ttctaaaccg ataataccac cacccataat aaggagtttt
     1801 ttcggtactt cttttaattt aagagcatcg gttgaatccc aaactcgtgg gtcttcgtgt
     1861 ggaataaatg gtagttgaat cggacgagaa cctgctgcga taatcgcatt atcgaacgtg
     1921 atagttgtag gattgccgtc acgatcacga gcgactaacg tattcggacc agtaaatgca
     1981 gccaagcctt ctactactgt cactttacga gccttagcca ttcctgctaa gccaccggtt
     2041 aattttgaaa caacggcttc tttaccagca cgtacctgat ctaaatcaat cgttggctca
     2101 ccaaaggtca caccgttgtg tactgcattt ttagcttctt caattacttt tgcaacgtgt
     2161 aataatgctt tagaagggat acaacctacg tttaagcaaa taccacctaa ggttgaataa
     2221 cgctcaacaa ttactgtttc taagcctaag tcggcacaac ggaatgccgc tgagtaacct
     2281 gctggacctg caccaagtac gacaacttgg gttttaattt ctttgctcat agtttttcct
     2341 ctttttattc ccccccttta gcaaagaggg gtaagggaga tttggcagaa tataaagcga
     2401 agtgagagag caatcaatca aacacaaatt tctaccaaat aatttattct cttcgtaaat
     2461 tacgtctatc aaatctcccc ctacccctct tttctaaaga gggacttttt taggaggagc
     2521 tttaccgaat tacatcacta aacgacgaat atctgccaac acgctattaa tatagcttaa
     2581 gaatctcgca ccatcagcac catcgatcac acggtggtcg aatgataatg aaagcggaag
     2641 cattaagcgt ggttcaaact ctttgccatt ccaaatcggt tgcatttcag atttagacac
     2701 acctaaaata gccacttccg gtgcattcac gattggcgta aagtgcgttg taccaatacc
     2761 gcctaaactt gaaattgtga aacagccacc ttgcatatca gatgctgtca atttaccttc
     2821 acgggctttt ttcgagactt ccattaattc gcgagaaagt tcgataatgc cttttttgtt
     2881 cacatttttg aacaccggca ccactaaacc gtttggcgta tcaaccgcaa ccccgatatt
     2941 gatgtatttt ttcaaggtta aacgttgtgc atcttcagaa attgagctgt tgaaacgagg
     3001 gaaggcttct aatgcacttg ccactgcttt cataatgaag accacagggg taattttcac
     3061 gtctaattta cgtttttccg cttctttatt ttgctcttta cggaagtttt ctaactcggt
     3121 aatgtctgtg cgatcgaaat gtgtaacgtg aggaatcatt acccagttac ggtgtaagtt
     3181 cgcaccggaa atcttattga tacggcttaa ttcaacttct tcaacttcac caaacttgct
     3241 gaaatctact ttcggccacg gtaataaacc taagcctgca ccgtttgccg cacctgttgc
     3301 tgccgctgct gttccgcctt gtttttcaaa tacttgaaca gccgttttaa cgtatgcttg
     3361 aatatcttct ttaacgatac ggcctttacg acctgtacct tttactttgt ctaggtttac
     3421 accaaactca cgagctaaac ggcgaattac cggtgttgcg tgtgcatagc cagctgaagc
     3481 caccacttgt tcttggctta aacctgattg gttttgacct gccggagctg cgtcagcttt
     3541 cgccggagct gctgcttgtg gagcaggagc aggagctgaa gccgcttgag cagccgccgg
     3601 agccggtgcc gcacccgcta cttcaaattt cataattaat gaaccggttg aaactttatc
     3661 acctgatttc actaaaattt ctttcaccac accggcaaat ggagccggaa cttccattga
     3721 agctttatca ccttcaaccg tgattaaaga ttgttcttct gaaacagaat cacccacttt
     3781 aaccataatt tcagttacgt ttacttcatc accaccgatg tccggtacat ttacatcttt
     3841 aatcgctgat gccgaagctt gagctggagc agcttccgca accggtgtag attgtgctgt
     3901 agctgcggaa gccgtttcaa atttcataat caatttacca gttgaaactt tgtcacccac
     3961 attgattaag atttctttta ctacgccggc aaccggtgca ggcacttcca ttgaggcttt
     4021 atcaccttca acgttgatga tagattgatc cacttcaacg ctatcaccta ctttaaccat
     4081 aatttcggtt acgttaactt catcgccacc gatatcaggt acatttactt caacaacggc
     4141 tgaagttgtt gctactggag cagcaggagc tgcttctgct tttggtgctt cttgagcagg
     4201 agcagcatct gctgactcta aaattaacat tggtgaaccg gttgaaactt tatcacccac
     4261 tttcactaaa acttctttta ccacacctgc ttcaggagcc ggcacttcca tagaggcttt
     4321 atcgccttct acgttaataa ttgattgatc tactgaaata gtatcaccaa cttttaccat
     4381 cacttcagtc acactgactt catccgaacc gatgtccggc acattaattt gttttgacat
     4441 tttgaaatcc ttcttgagtt accccctctc ccattgtggg agggacagat ttttctttgt
     4501 aagaagaaaa atcagggaga agggaatgca agcggttgat tttctcaaca tttttgcaaa
     4561 taaaactaat accctctctg ctaaaagttt ctaaacgaaa cctttagctg tctctctccc
     4621 atcaagggag agagtattag aaattacgca tataatgggt taatacgatc tacatttaag
     4681 ccgaatttag taatagcttc cgcaaccact ttgttttcaa ctgtaccttc tttcgctaat
     4741 tgagcgaggg ctgcaactac tacataacgc tcatcaactt cgaagtgttc acgtaagttt
     4801 gcacggctgt ctgaacgacc gaaaccgtct gtacctaaca cgtgatagtg tttacttggt
     4861 acataagcac ggatttgctc tgcgtacatt ttcatatagt cggttgaagc aacagtcggt
     4921 aaatcttgta acacttgagc aacgtacggt acacgtggtg tttcagttgg gtgtaataag
     4981 ttccaacgag ccacatctgc tccatcacga cctaattcat tgaatgatgg tgctgagaat
     5041 acatctgctg taatgccgta gtcattcgcg agaatttgtg cagctgcacg cacgtgacgc
     5101 ataattgcac ctgagcttaa taattgtacg tgacctttac ctttaccctc aacggtttca
     5161 aatttatata aacctttacg gataccttct tccgcacctg ccggcattgc cggctgttcg
     5221 gtaatttcat ttaaggtagt aatgtagtag aagatatctt cttggttttc accatacata
     5281 cgacgaatac cgtcttgaac aataaccgca acctcaaagg caaatgcagg gtcataagtg
     5341 acgcagttcg ggattacacc tgcttgaata tggctatgac catcttcgtg ttgtaaacct
     5401 tcaccgttta atgttgtacg acctgaagta ccaccaatca taaagccacg agctaattgg
     5461 tcaccggcta accacatcat atcgcctaca cgttggaaac caaacattga gtagtagatg
     5521 aagaatggga tcatcggtaa gttgctaaca gaataagaag tcgctgctgc cacccaagag
     5581 gctgttgcac ctaactcatt gataccttct tgtaacactt ggccatcttt tgcttcacgg
     5641 tagtaagcta ctaaatcacg gtctgacggt acatagtttt gaccatgtgg gttataaata
     5701 ccgatttgac ggaataaacc ttccataccg aaagtacggg cttcgtccgc aataataggt
     5761 acgatttgct gaccgatatt tttatctttc aataaagtat tcaatacacg agagaacgcc
     5821 attgtggttg aaataccacg tggttgctca tccaataatg cttggaattc gcttaattca
     5881 ggcactttga aatcaaccgt aaatttcggt ttacgtacag gcacataacc gtttaaggct
     5941 ttacgttgtc cgtgtaagta gttgtactct tcagaacctt cagggaatct tacatactct
     6001 aggctttcta cttgctcatc ggttaatggt agctcgaagt agtcacggaa gccttttaag
     6061 ctgtctaatg acattttttt cgattggtga gcagtatttt tactttccgc ttcaggaata
     6121 cggtagcctt tcacttggtg agctaaaatt acaactggtt tgtccgattt ttgtgctttt
     6181 gcataggctg cataaagttt ttcagaatcg tgtgcaccac ggcgtaatgc ccaaatttca
     6241 tcgtctgtca tatcagcaac taatgctgca gtttcagggt aacgaccgaa gaagtgttca
     6301 cgaacgtaag caccattttt ggatttgaag gttaaatagt caccatcaag cacttccatc
     6361 attaactgtt taagtttgcc tgaagtatct ttttcaagca gtttatccca accactaccc
     6421 cataacactt taatcacttc ccagccacaa ccggtaaaga gtgcttctaa ttcttgcacg
     6481 attttgccgt taccgttaac cggaccgtct aaacgttgta agttacagct aatagtgaag
     6541 attaagttat ttaatttttc acgaccggcg aatgataatg cacctttaga ttcgatttca
     6601 tccatttcgc catcgcctaa gaatgcatat actttttgag ccgaagtatc ttttagacca
     6661 cggttttcta aatattttaa gaaacgagct tggtaaatag catttaccgg tcctaaaccc
     6721 atagatacgg tagagaattg ccaaaattca ggcattaatt tagggtgtgg gtaagaagat
     6781 aaaccgtctg taaatgcttc ttgacggaag ttatccattt gttctgcggt aatacgacct
     6841 tctaagaacg cacgaccata catacccggt gctgcgtggc cttggaagaa cactaaatca
     6901 ccaccatctt tttcggttgg tgctttgaaa aagtggttaa aacacacttc atacatagtt
     6961 gccgcagatt ggaaagttga aatatgacca cctaagtcaa gatctttctt ctggctacga
     7021 agtactgccg caatcgcatt ccaacgtacc gcagaacgaa tacgacgttc gattttatga
     7081 tcacccggat aagctggctg ctcggaaaca gggatagtat tgacataatc tgttgttacg
     7141 cctgttggta atgccacgcc acctgcacga gcttggctaa taacttgttc aatgataaat
     7201 tgagcgcgct ctaaaccttc ttcacgaatt aatgaatcga gtgatgctaa ccaatcctga
     7261 gtttcgattg gatctacgtc atttcttaag ttctctgaca tagtattctt ccttataaat
     7321 taacgattga ggtgataaat aacaaaattt taacaaattt tgtttgtttg gtgattttta
     7381 gaccaattct tatcgaaaaa atttcagtaa aaca
//
LOCUS       DANLTI010000126         7389 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.127, whole genome shotgun sequence.
ACCESSION   DANLTI010000126 DANLTI010000000
VERSION     DANLTI010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7389
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.127"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            18..1031
                     /gene="cas1c"
                     /locus_tag="PXB09_002215"
     CDS             18..1031
                     /gene="cas1c"
                     /locus_tag="PXB09_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated endonuclease Cas1"
                     /protein_id="HDL5234286.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPIHSIGHI
                     FCFGNVLVSPFLMGFCGENNVNLAFFTENGRYLGRLQGRQSGNVLLRRAQYKKSETNP
                     VPVARNIIAAKIQASKRVLQRQIRNHGENADLQSTITALNYSLQQLKTADNLDLIRGI
                     EGDAAARYFGVFSHLIKENSGFHFDGRNRRPPRDGVNALLSFLYSIVGKDISGALQGV
                     GLDPQIGFLHADRSGRDSLAQDILEEFRAWWVDRMVLSLINRGQVKPDDFVTEASGAV
                     TLKPEARKLLFQTLQAKKQEKIIHPFLEEEVEIGLLPYIQAMLLARHLRGDLAEYPPF
                     LMR"
     gene            1098..1391
                     /gene="cas2"
                     /locus_tag="PXB09_002216"
     CDS             1098..1391
                     /gene="cas2"
                     /locus_tag="PXB09_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDL5234287.1"
                     /translation="MLMLITYDISFDDPEGQARLRRIAKHCLDYGVRAQYSVFECDVT
                     PAQWVTLKNKLLATYNPDCDSLRFYHLGSKWRNKVEHHGAKPSVDIFKDTLIL"
     repeat_region   1583..2617
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=2053..2083
                     /rpt_unit_seq="cagccacctacgcgtggctgtgaattgaaac"
     gene            2802..4277
                     /gene="rng"
                     /locus_tag="PXB09_002217"
     CDS             2802..4277
                     /gene="rng"
                     /locus_tag="PXB09_002217"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDL5234288.1"
                     /translation="MSSTELLVNVTPSETRVALVENGILKELHIEREAKRGIVGNIYK
                     GRVTRVLPGMQSAFVDIGLEKAAFLHASDIVSHTECVDENEKKQFLVKDISELVREGQ
                     DIVVQVVKDPIGTKGARLTTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKSLVE
                     PYCDELGGFIVRTAAEEATEESLKQDVEFLKRLWRKVLERKGKYSAKSMLYGELALAQ
                     RVLRDFIGTHINSVRIDSKLTYEQVREFLAEFMPELTDCVTLYTGQQTLFDAYGVEKA
                     IQKALDKRVDLKSGGYLIIEQTEAMTTIDINTGAFVGHRNLAHTIFNTNIEAIQAIAH
                     QLQLRNLGGIIIIDFIDMQEEEHRERVLQSLQEALKGDRVKTNVNGFTQLGLVEMTRK
                     RTRESLERILCCDCQACQGRGTVKTVETVCYEIMREIVRVHHLFKTENIHVYAAKDVA
                     EYLINEESHALLAELQAFIGKKIEIKLEPYYHQEQFDVVVM"
     gene            4431..5933
                     /gene="lysS"
                     /locus_tag="PXB09_002218"
     CDS             4431..5933
                     /gene="lysS"
                     /locus_tag="PXB09_002218"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDL5234289.1"
                     /translation="MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKD
                     LHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSD
                     SVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
                     TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKP
                     FITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEY
                     YQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYGN
                     GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAE
                     ISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEA
                     MFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRQK"
     gene            complement(6011..7084)
                     /locus_tag="PXB09_002219"
     CDS             complement(6011..7084)
                     /locus_tag="PXB09_002219"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDL5234290.1"
                     /translation="MAQQITLFEDVPLPLTLGGELSPITVAYQTYGRLNAEKSNAVLL
                     CHALTGDAKPYYDSPTEKGWWQDFIGKGLAFDTDKYFFICSNVLGGCKGTTGPASINP
                     KTNKPYGSLFPIITVQDIVNVQKALLDYLEIPQLHAVVGGSFGGMQATQWGISYPDKV
                     RNIINLCSSLTLSAEAIGFNHVMRQAIINDPHFNGGNYYDGIAPDNGLKIARMLGMLT
                     YRTDIQLAKAFGRETKQQGQIWGDHFQVESYLSYQGTKFLGRFDANTYLRLLRALDLY
                     DPALGYENEETALKRIKANYTFVAVTSDQLFKQVDVYKSKQKLEQAGVNLEFHEFHSD
                     FGHDAFLVDYDFFEPMIKAGLAK"
BASE COUNT         2181 a         1367 c         1682 g         2159 t
ORIGIN      
        1 taaagggatt ttcaaccatg cgcaaactac aaaacaccct ctacattacc acccaaggta
       61 gctatttgca caaagagcga gaaaccttgg tggtggagca agatcggaag aaagtggcac
      121 agttgccgat tcattccatt gggcatattt tttgttttgg caatgtgtta gtgtcgccgt
      181 ttttaatggg attttgtggc gaaaataacg taaatttagc gttttttacc gaaaatgggc
      241 gttatcttgg gcggttgcag gggcggcaaa gtggtaatgt attgttacgc cgagcccagt
      301 ataaaaagtc ggagaccaac cctgttcctg tggctcgcaa catcattgca gccaaaattc
      361 aagcatctaa gcgggtgtta caacggcaaa ttcgtaatca cggcgaaaat gctgaccttc
      421 aatcgacaat taccgcatta aattacagcc tgcaacagtt gaaaacagca gacaatttgg
      481 atttgattcg tggcattgag ggcgatgctg cggctcgtta ttttggggtg ttttctcatc
      541 ttatcaaaga aaatagcggt ttccactttg acggacgtaa tcgccgccca cctcgtgacg
      601 gtgtgaatgc gttgctttca tttctttata gcattgtagg gaaagatatt agcggggcat
      661 tgcaaggcgt ggggcttgat ccccagattg gctttttgca tgcagatcgt tcggggcgag
      721 atagcttagc tcaagatatt ttggaggaat ttcgagcgtg gtgggtggac agaatggtgc
      781 tgtcgctgat caatcgaggg caggttaagc ctgatgattt tgtgacggaa gccagtggtg
      841 cggtaacgct caagcctgaa gccagaaaat tactatttca aaccttgcaa gcgaaaaaac
      901 aagaaaaaat catccaccca tttttagagg aagaagtgga aatcggcttg ttaccttata
      961 tccaagcgat gttattggct cgtcatttgc gtggcgattt ggcagaatat ccgccgtttt
     1021 taatgcgtta aaatctgcaa aattttgttg aaatttgacc gcttgtttat gttttattca
     1081 ttgaggaatt agcaactatg ctgatgttga ttacctacga catttcattt gatgaccccg
     1141 aagggcaggc tcgcctacgc cgtattgcta agcattgttt ggattatggt gtgcgggcgc
     1201 aatattctgt gtttgagtgt gatgttactc ctgctcagtg ggtaacattg aaaaataaat
     1261 tattggcaac ttacaaccca gactgtgata gtttgcgctt ttaccattta ggcagtaaat
     1321 ggaggaataa agttgagcac catggcgcaa aaccttcagt ggatattttt aaagatacgc
     1381 tgattttata aatcgctagc ctgtagttct cataaaaatg tagcaaggtt agcgaatcta
     1441 tattgttctt taataatcaa ggaattagaa aaaataaggc acaatatatt ggcgatatgc
     1501 tatactttat ccactctcta caaaacgtta gcgaataaag ggctaaaaag cctgatattt
     1561 caatacgtta tcttataggg accagccacc tacgcgtggc tgcgaattga aaccctataa
     1621 cgagcaatgg cattttgatc tacggtaaac cagccaccta cgcgtggctg cgaattgaaa
     1681 cctttttcaa gaatcaagat taagagatcc aaacaaccag ccacctacgc gtggctgcga
     1741 attgaaacca ccgctgctac ttcggttatc ggagtagttt gcacccagcc acctacgcgt
     1801 ggctgcgaat tgaaacgtgg cacagtaaca cgagcagatg ctgataaacg cccagccacc
     1861 tacgcgtggc tgcgaattga aaccagcagc cgttgttacc gtggtgcaat gcttgcgcca
     1921 gccacctacg cgtggctgcg aattgaaact acacttattg ccatagggta gtagtaatct
     1981 tttacccagc cacctacgcg tggctgcgaa ttgaaactgc gatttttgga tttttcgggc
     2041 gataaatgat accagccacc tacgcgtggc tgtgaattga aactcgtggc tggttataca
     2101 aagaaaagca ttgttgggca gccacctacg cgtggctgtg aattgaaact taaatctaaa
     2161 gctaaagcta ttttattaat taaagcagcc acctacgcgt ggctgtgaat tgaaacttta
     2221 ccgtttaccg attggatttt aatgctagag gcagccacct acgcgtggct gtgaattgaa
     2281 accctaaatt gccgtaaaaa tctgccatta gctacgcgca gccacctacg cgtggctgtg
     2341 aattgaaacc tcataacgaa tccaatcctg ttcggttaat ccccgcagcc acctacgcgt
     2401 ggctgtgaat tgaaacaggg gcgtgtaccg caatcaattt taattataac caagcagcca
     2461 cctacgcgtg gctgtgaatt gaaacctcgt cttgaattgg aaaatcaagg gcgacaatag
     2521 gcagccacct tcgcgtggct gtgtattgaa acggtgtacc cacaaatcct atgttttcgc
     2581 cattggctgc taccttcgca tcaatatata ttgaaatatc aatggcaaat ttgtatgttg
     2641 ttaattagac tgattgcatc tgctatgtat catagtaatg acgaaaatat tctattttgc
     2701 aaaaaataat cagaaattac ccgcttgttc gaactgagtt tttgttttct aagatgtgaa
     2761 atgatacact ttagatagtt ttaaaatata gagacagtaa gatgagtagt acggaattat
     2821 tagtgaatgt taccccaagc gaaacaaggg tagcgttggt agaaaacgga atattgaaag
     2881 aattacatat tgagcgggaa gctaaacgcg ggattgttgg taatatttat aagggaaggg
     2941 tgacaagggt attaccaggt atgcaatctg cttttgtgga tatcggcttg gagaaggctg
     3001 cttttttgca cgcttctgac atcgtttcgc atacggaatg tgttgatgaa aatgaaaaga
     3061 agcaatttct ggttaaagat atttctgaat tggtgcgtga agggcaagat atagttgtac
     3121 aagtagtgaa agatccaatt ggtactaaag gagctaggct cactactgat attacgttac
     3181 catctcgtta tttagtgttt atgccagaaa atagccatgt gggagtatct cagcggattg
     3241 aaagtgaaga agagcgtgct cgtttaaaaa gcttggttga gccttattgt gatgaacttg
     3301 ggggctttat tgtacgtacc gctgcagaag aggcaactga agaaagttta aagcaagatg
     3361 ttgaattttt aaaacggttg tggcgtaaag tattagaacg aaaagggaaa tattccgcaa
     3421 aatcaatgct ttatggagag cttgcgcttg ctcaaagggt actgcgtgat tttattggta
     3481 cacatatcaa ttcggttaga atcgattcaa agctaactta tgagcaagtg cgagaatttt
     3541 tagctgagtt tatgccagaa ttaacggatt gtgtcaccct ctataccggt cagcaaactt
     3601 tatttgatgc ctatggtgta gaaaaggcaa tccaaaaggc attggataaa cgggttgatt
     3661 taaaatcggg gggctattta attattgagc aaactgaggc gatgacgact attgatatta
     3721 atactggtgc ttttgtcgga catcgtaacc ttgcacatac gattttcaac acaaatattg
     3781 aagcaataca ggcaattgca caccagctac agttgcgtaa tttaggtggt attatcatta
     3841 ttgattttat tgatatgcaa gaggaagaac atcgtgagcg cgttttacaa tcgttacaag
     3901 aggcattaaa aggcgatcgt gttaaaacca atgtgaatgg ctttactcag cttggcttgg
     3961 tggagatgac cagaaaacgt acaagggaga gtctagagcg aattctttgt tgcgattgcc
     4021 aagcttgcca agggcgtggc acagtgaaaa ctgtagagac ggtttgctat gaaattatgc
     4081 gtgaaattgt gcgtgtacat catttgttta agacagaaaa tattcacgtt tatgcagcta
     4141 aagatgttgc tgaatattta attaacgagg aaagccacgc attattggct gagcttcagg
     4201 cgtttatcgg taaaaaaatt gagattaaac ttgagccata ttatcatcaa gagcagtttg
     4261 atgtggtcgt gatgtaatct attacttggt tgaggctaaa tagttagcct caatatcgtt
     4321 agttacaaaa aatttagaaa atctgaccgc ttgtttccta tccaaattcc tcaaaataac
     4381 gtataatcgt ccagttttat ttatcctttt ttgaaatcta aggtaattca atgtctgaag
     4441 tagaaaatca agaattagat ctaaacggtg aaatgttagc ccgccgtgaa aaattaaaca
     4501 aaatccgtga gcagggtaac gcatttccaa atacattccg tcgtgatgcg ttagccaaag
     4561 atctgcacgc tcaatatgat gcagtggaag gtgaaacctt aaaagaacag aatattcaag
     4621 tgaaagttgc cggtcgtatt atgttaaaac gagtaatggg taaggcatct ttctttacca
     4681 ttcaagatgt gagcggtgcg attcagcttt atgtagctcg tgataactta agtgacagcg
     4741 tttacgaaga aaaagtcagc ctttgggatt taggcgacat tgtgggcgtc gaaggtgcgt
     4801 tatttaaaac caaaaccggt gaattaacgg ttcgttgctc tgaagttcaa cttttaacca
     4861 agtctttacg cccgttgccg gataaacatc acggtttaac ggatttagaa actcgttatc
     4921 gtcagcgtta tttagacttg atttctaatg aagaatctcg ccgtactttt atgatccgct
     4981 cgcaagtagt ttcaggcatt cgcaaattct tcttagaaag agactttatt gaagttgaaa
     5041 cgccaatgtt gcaagtgatc ccgggcggtg cggcagcgaa accgtttatc actcatcata
     5101 atgcgttaga tgtggatatg tatctgcgta ttgctccaga gctttactta aaacgtttag
     5161 ttgtgggtgg ttttgagcga gtatttgagc ttaaccgtaa cttccgtaac gaaggggttt
     5221 cagtacgcca caatcctgaa tttacaatga ttgagtacta ccaagcctat gcggattatc
     5281 acgatttaat ggataatacc gaagaactgt tacgccaatt agccttagat attcttggca
     5341 caactgacgt accttatggt gattatgtat tcgatttcgg taaaccgttt gagcgtatta
     5401 cgatgcacga tgcgattgtg aaatatggta acggcattca acgtgaagat ttagacagct
     5461 tcgagaaaag tgtggaaatt gcgaaaggct taggcattga aattcaaaaa tcttggggtt
     5521 taggctcggt agtcaatgcg atttttgaag aagtggcaga acatcaatta attcagccaa
     5581 ctttcttgat ggctcacccg gcagaaattt caccattagc tcgccgtaat gatgaaaacc
     5641 cagaggtaac tgatcgtttt gagttattta tcggtggtcg tgaaattggt aatggtttct
     5701 cagaattaaa cgatgcagaa gaccaagcag agcgttttga tgctcaagtt gcggcgaaag
     5761 atgccggtga tgatgaagca atgtttaaag atgaagactt tatcgtggca ttggaacacg
     5821 gtctgccgcc aacagcgggt gaaggtttag gaattgaccg cttagtaatg attttcgcta
     5881 acgccccatc aatccgtgat gtaattttat tcccagcgat gcgtcagaag taatcagaaa
     5941 tagaacaaaa gcacacttcg gtgtgctttt ttgtattaca agcggtcaaa tttataataa
     6001 aaaatgcaat ttattttgct aatccggctt taatcatcgg ttcaaaaaag tcataatcaa
     6061 ccaaaaaggc atcgtgtccg aaatcggagt gaaactcgtg gaactccaaa tttacgcctg
     6121 cctgttctaa tttttgtttg ctcttataca cgtcaacttg cttgaatagt tggtcgcttg
     6181 ttaccgctac aaaagtgtag ttggctttaa tacgttttag ggcggtttct tcattttcat
     6241 agccaagagc cgggtcgtat aaatctaatg ctcggagtaa acggaggtaa gtgttggcat
     6301 cgaaacgacc taaaaatttc gtgccttgat agcttaaata ggattccact tggaaatggt
     6361 cgccccaaat ttgtccttgc tgtttggttt ctcgtccaaa ggctttagca agttgaatat
     6421 cagtacggta agtcagcata ccgagcatac gggcgatttt taagccgtta tcaggtgcaa
     6481 tgccatcata atagttccca ccgttaaagt gtggatcgtt aataatagct tggcgcataa
     6541 cgtggttaaa accgatagcc tcggcactta gggtaagtga cgaacaaaga tttataatgt
     6601 tgcgaacttt atcagggtaa ctaatacccc actgtgttgc ttgcattccg ccgaaagatc
     6661 cccctaccac tgcgtgaagt tgagggattt ctaaatagtc caataatgct ttttgtacat
     6721 taacaatatc ttgcactgta ataattggaa acaaactacc gtaaggttta ttggttttag
     6781 ggttaatcga agctgggccg gttgtgcctt tacaaccgcc taatacatta ctgcaaataa
     6841 agaaatattt atcggtatca aacgcaagcc ctttgccgat gaaatcttgc caccagcctt
     6901 tctcggttgg tgagtcatag taaggcttag catcaccggt aagggcgtgg caaagcaaga
     6961 ccgcattgct tttctctgca tttaatctgc cgtaagtctg gtaagccact gtgatagggg
     7021 acagttcgcc tcctaatgtg agtggtaaag gtacgtcctc aaaaagggta atctgctgag
     7081 ccataaaaat cctgtttgca aaaaattctg cttttttgac cgcttgttgt aatgaccgtt
     7141 aaattagcgg tgttcatttc aattgtcaag aatttttaga cgtctaaacg tctagatttt
     7201 taaacggcta aaatcaaaat tttattgctg agaagatatt tattacttaa caaataacat
     7261 gaaatagaat aaatttattg aacgattaga ctattttgtt tgtctctaat ttacccatct
     7321 taaatagggt agcaaaagta aaggatctca tttgaaccaa acgcgtgata ggttagaaaa
     7381 attgccact
//
LOCUS       DANLTI010000127         7183 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.128, whole genome shotgun sequence.
ACCESSION   DANLTI010000127 DANLTI010000000
VERSION     DANLTI010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7183
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.128"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..629
                     /locus_tag="PXB09_002220"
     CDS             <1..629
                     /locus_tag="PXB09_002220"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDL5234291.1"
                     /translation="QAGEVSFKNVVTFNMDEYVGLPKEHPESYHSFMFKHFFDHVDIP
                     LENINILNGMAEDVNAECERYEEKIRFYGKIHLFMGGVGVDGHIAFNEPASSLSSRTR
                     IKTLTEDTRIANSRFFNNDVSQVPKFALTVGVGTLLDAEEVMILVTGHNKALALQACV
                     EGAVNHLWTISCLQLHRRGIVVCDEPATQELKVKTVKYFKELEKNVAR"
     gene            710..1852
                     /gene="nagA"
                     /locus_tag="PXB09_002221"
     CDS             710..1852
                     /gene="nagA"
                     /locus_tag="PXB09_002221"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDL5234292.1"
                     /translation="MNHYALTNCVIYTGEQVLYQHALVVKEDKIDSIVLEENLPLDLQ
                     KIDLKGANLSAGFIDLQLNGCGGVMFNEEITTRTLEIMQETNLRSGTTSYLPTFITSP
                     DEGVKQAVAVMREYLSKHKNQALGLHLEGPYLSVAKKGVHRPEFIREISPEMLDFLCD
                     NGDVITKITIAAENPTADHIKRFNDAGIIVSIGHSNATFAQTKQRIAEGAAFATHLHN
                     AMSPVSNGREGGVVGAVLDSDIYTGIICDGLHVEWGNIRIAKKAKGDKLVIVSDAVAA
                     AGSDIESFIFVGKKVTVKDGKCYDEFGALGGAAITMIESIRNVVQHCDISLNEAIRMS
                     TLYPAKAIGVEETLGSLEAGKIANLAIFDNQFEVKATAVNGQLQWH"
     gene            1934..2248
                     /locus_tag="PXB09_002222"
     CDS             1934..2248
                     /locus_tag="PXB09_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HDL5234293.1"
                     /translation="MQFKDYLATFPTIDHLAGLNVINSGEVIQHIPAIEGKLGSLKLY
                     NALFAKFDGKLTASAAKQGLEWFAEHVEDAKNNVGKHPNIDLLFRVIEQDLSLSLEPI
                     VK"
     gene            complement(2327..3517)
                     /locus_tag="PXB09_002223"
     CDS             complement(2327..3517)
                     /locus_tag="PXB09_002223"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDL5234294.1"
                     /translation="MTQAIESVLAELKRGVENIYSEEDLITKLKENRPLRIKLGADPT
                     APDIHLGHTVVLNKLRQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNA
                     ETYKEQIFKILDPQKTKIVFNSEWLGKLGTEGMIRLASNYTVARMLEREDFKNRFTNQ
                     QPIAIHEFIYPLLQGHDSVELKADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPL
                     LVGLDGEKKMSKSLGNYIGVTEAPSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLK
                     ADVENGKNPRDVKILLAKEIIARFHDEAAADAAEQEFINRFQKGAIPDEVPEFTFEGE
                     IGLAALLKEAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQTAQKGTFVYQVGKRKFAR
                     ITVK"
     gene            complement(3880..5184)
                     /locus_tag="PXB09_002224"
     CDS             complement(3880..5184)
                     /locus_tag="PXB09_002224"
                     /EC_number="7.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HDL5234295.1"
                     /translation="MESIIALFKGMGLMHLELGQAIMIVISLVLLWLAIARKFEPLLL
                     LPIGFGGLMSNIPEAGMAMTALDNLLHSGSAEQLAIIAAKVNSTSLDLHSIKDAIALA
                     APSVQNELEVMAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRM
                     LMLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPE
                     LLGAIAVAAYSYMALVPLIQPPIMKALTTEQERKIRMVQLRNVSNREKIIFPIVLLLL
                     VALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIFLGLSVGAKLVADK
                     FLQPQTLGILVLGVIAFGIGTASGVIMAKIMNRFSQHKINPLIGSAGVSAVPMAARVS
                     NKVGQEYDKQNFLLMHAMGPNVAGVIGSAIAAGVMLKYISTM"
     gene            complement(5194..7020)
                     /gene="oadA"
                     /locus_tag="PXB09_002225"
     CDS             complement(5194..7020)
                     /gene="oadA"
                     /locus_tag="PXB09_002225"
                     /EC_number="7.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-extruding oxaloacetate decarboxylase
                     subunit alpha"
                     /protein_id="HDL5234296.1"
                     /translation="MTTQPKKIAITDVVLRDAHQSLFATRLRLDDMLPIASELDNIGY
                     WSLETWGGATFDSCIRFLGEDPWVRLRELKKAMPKTPMQMLLRGQNLLGYRHYADDVV
                     DKFVERSVANGMSVFRVFDALNDPRNMQAALQAVKKHGGHAQGTLSYTTSPVHTLQTW
                     LDVTEQLLEIGVDSLVIKDMSGILTPMAAYELVSEIKKRYDVELHLHCHSTTGMAEMA
                     LLKAIEAGVDGVDTSISSMSGTYGHPATESIVATLQGTPYETGLSIPALEKISAYFRN
                     VRKKYAKFEGQLRGIDSRILVAQVPGGMLTNLESQLKQQNASDKLDLVLQEIPRVRED
                     LGNIPLVTPTSQIVGTQAVMNVLMGERYKTIAKETAGILKGEYGRTPAPVNKALQDRV
                     LEGAEPITDRPADHLPPELEKLVAEVTASAKEKGITLSENMIDDVLIVALFQQVGWKY
                     LENRNNPSAFEPVPSADEAKPAQASAASAPKAQTQSGSAIYTVELEGKAFVVKVSEGG
                     DITNIAPTPATPAPQAVDSAPKSANTLSANAEPVNAPMAGNILKVEVKEGQQVAEGDV
                     LLILEAMKMETQICAAKSGTIQGINVKQGDVVAVNDTLMSIA"
     gene            complement(7060..>7183)
                     /locus_tag="PXB09_002226"
     CDS             complement(7060..>7183)
                     /locus_tag="PXB09_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxaloacetate decarboxylase gamma chain"
                     /protein_id="HDL5234297.1"
                     /translation="EPVSIPASKTVPQSPPDDLERLRPVIAAAIAHHRRINGQH"
BASE COUNT         1979 a         1535 c         1617 g         2052 t
ORIGIN      
        1 atcaagctgg tgaagtgagc tttaaaaatg tggtgacttt caatatggac gaatacgtcg
       61 gcttacctaa ggaacaccct gaaagctacc acagttttat gttcaagcac ttttttgacc
      121 acgttgatat tccgcttgag aatatcaata tcctcaacgg tatggcggaa gacgtgaatg
      181 cagaatgcga acgttatgaa gaaaaaatcc gtttttatgg taaaatccat ctgtttatgg
      241 gtggggtcgg tgtggatggg catattgcgt ttaatgagcc tgcatcttcg ctttcttccc
      301 gcactcgaat taaaacgctt accgaagata ctcgcattgc aaactcacgt ttctttaaca
      361 atgacgtaag ccaagtgccg aaatttgctt taaccgttgg ggttggtacg ttgcttgatg
      421 ccgaagaagt gatgatctta gtgaccggcc ataacaaagc cttagcatta caggcgtgtg
      481 tggaaggggc ggtaaatcat ctttggacca tcagttgctt acaattacat cgccgtggta
      541 tagtggtgtg tgatgagccg gcaacccaag agctgaaagt taaaacagtt aagtatttca
      601 aagagttaga gaaaaacgta gctcgctaat tctgatttta caagcggtta attttgtaat
      661 attttttaca aaaacgaccg cctgttagca tttaaagaga agagagaaaa tgaaccatta
      721 tgccttaaca aactgtgtga tttacaccgg tgaacaagtg ctttaccaac acgcattagt
      781 ggtgaaagaa gataaaatcg actccattgt tttggaagaa aatttaccgc tggatctgca
      841 aaaaatcgac ctaaaaggag cgaatctttc agccggtttt attgacttgc aactgaacgg
      901 ctgcggtggg gtgatgttta atgaagaaat cactacccgc actttagaaa ttatgcagga
      961 aaccaatctg cgttcaggca caaccagcta tttaccgact tttattacct cgcctgatga
     1021 gggagtgaaa caagcggtgg cggtaatgcg tgagtatttg tcgaaacaca aaaaccaagc
     1081 actcggcttg catttggaag gaccttatct aagtgtggca aagaaaggag tacaccgtcc
     1141 ggaatttatc cgtgaaatca gccctgaaat gttagatttc ttatgcgata acggcgatgt
     1201 aattacgaaa atcacgattg cagcagaaaa cccgaccgca gaccatatca aacgctttaa
     1261 tgatgcagga attattgtat ctatcgggca ttccaatgcc acttttgctc aaaccaaaca
     1321 gcgaattgcc gaaggggcag cgtttgctac gcatttacac aatgcaatgt cgccggtcag
     1381 caacgggcgt gaaggcggtg tagtaggggc ggtgttggat agcgatattt acaccggcat
     1441 tatttgcgat ggcttgcacg ttgaatgggg caacattcgc attgccaaaa aagccaaagg
     1501 cgataaatta gtgattgtca gcgatgctgt tgctgccgca ggaagtgata ttgagtcgtt
     1561 tatttttgtc ggtaaaaaag tcacggtgaa agatggcaaa tgctacgatg aattcggagc
     1621 attgggcggt gcggcaatca cgatgatcga atccattcgc aacgtagtgc aacattgcga
     1681 tattagcctg aatgaagcaa tccgaatgag taccctttac ccggcaaaag cgattggggt
     1741 agaggaaaca ctcggctcac ttgaagccgg caaaattgcc aaccttgcga ttttcgataa
     1801 tcaatttgaa gtaaaagcga ctgctgtaaa cgggcaatta cagtggcatt aattttgcta
     1861 caaattctaa gcataacagc atataatcca aaggcaggca ttgtgtctgc cttttattta
     1921 tagggagaat aacatgcaat ttaaagatta cttagccact tttccaacta ttgatcatct
     1981 agccggctta aacgtgataa atagcggtga agtgattcaa catattcctg cgattgaagg
     2041 taaattaggt tcactaaaac tttacaatgc actgtttgcg aaatttgatg ggaaattaac
     2101 cgctagtgca gcaaaacaag ggttggaatg gtttgccgaa cacgttgaag atgcgaaaaa
     2161 taatgtgggt aagcacccga atattgatct attatttagg gtaattgagc aagatttatc
     2221 tttaagttta gagccgattg ttaaataaga ttgcactagt gaaaaataac aagcggtcat
     2281 tatctgcaaa atttttgcaa ataatgactg cttgtgttta agaggcttat ttcacggtaa
     2341 tgcgtgcaaa tttgcgtttg ccgacttggt aaacaaaagt gcctttttga gcagtttgtt
     2401 tcacatcttc cactttttca ccatcaattt taaccccgcc ttgttgggct gagcgaattg
     2461 cctctgaagt ggacggtact aagccggctt ctttcagtag agccgctagg ccgatttcac
     2521 cctcaaaggt aaattcaggc acttcatcag gaattgcccc tttttggaaa cggttgataa
     2581 actcttgctc tgctgcatct gctgccgctt catcgtggaa acgagcgata atttcttttg
     2641 ccagtagaat tttcacatca cgcgggtttt tgccattttc aacatccgct tttaattgtg
     2701 caatttcgtc taatggacgg aatgagagca ggttgtacca atcccacatt aaatcgtctg
     2761 aaatcgacat aattttgccg aacatttcgc ttggagcttc agttacacca atgtagttgc
     2821 cgagagattt cgacattttt ttctcgccgt ctaagccgac aagtagtggg agtgtcattg
     2881 ccacttgtgg tttttgaccg gctgattttt gtaactcacg tccaactaac aagttaaagg
     2941 tttggtctgt accacctaat tccacgtcag ctttcagttc taccgagtcg tgaccttgta
     3001 gtagcggata aataaattcg tggattgcga tcggttgttg gttcgtgaaa cggtttttga
     3061 aatcttcacg ttctaacatt cgagcaacgg tgtagttgga ggctaagcgg atcatacctt
     3121 ccgtacctaa cttgcctaac cattcggagt tgaatacgat cttggttttt tgtggatcta
     3181 aaattttgaa gatctgctct ttataggttt cggcattgcg taacacgtct tcacggctaa
     3241 gtggcggacg ggtagagttt tttcctgatg gatcgcctac cataccggtg aaatcaccga
     3301 ttaagaaata gacttcgtgt ccgaattgtt ggaattgacg aagtttgttc agcacaacag
     3361 tatgacctaa gtgaatatcc ggtgcagttg ggtctgcccc taatttaata cgcaatgggc
     3421 ggttttcttt taatttggtg attaaatctt cttctgaata aatattttcc acgccacgtt
     3481 taagttcggc aaggactgat tcgatagctt gagtcattta tcttcctttt agtcttgaat
     3541 ataaaaaatg gatctattat agcggtatga attgaaattg ataggctata ggcgaaaaaa
     3601 aacgccgtat tttgtggggg aatacggcgt aaagagttgg agtgattacc tattattttt
     3661 gaagtgattt aatgataatg attatcatct gttaagtcaa tacttttttt gaaaattttc
     3721 aataagaatt attctcatca attaagtaag atggatacta cggcaattag tgaagaatgt
     3781 acagcggaat tttcgtattg taagagtgtt ggtaagcggt atttttagaa aaaacctccg
     3841 agagcggtta tttttcggag gttttttgca aatgaggatt tacatcgttg aaatgtattt
     3901 caacatcacc cccgctgcaa tcgcagagcc aatcacgccg gcaacgtttg ggcccattgc
     3961 gtgcattaac aagaagtttt gtttatcgta ctcttgtccg actttgtttg atacccgtgc
     4021 agccatcggc acggcagaaa cacccgctga gccgataagt gggttgattt tgtgctgact
     4081 aaagcggttc attattttcg ccataatcac accgcttgca gtgccgatcc caaaggcaat
     4141 cacgcccaat actaaaatgc ctagtgtttg cggttgtaag aatttgtctg cgaccaattt
     4201 tgcccccacc gataacccta agaaaatcgt cacgatattg attaacgcat tttgggcggt
     4261 gtcgtttaag cgttctacta cgccactggt tcgcagtaag ttgccaaagc agaacattcc
     4321 caataacggt gcagcatccg gcagtaagag tgccactaat aatagcaaca cgatagggaa
     4381 aataattttc tcacggttgc ttacattacg gagctgaacc attcggattt tacgttcttg
     4441 ctcggtggtt aaggctttca taatcggcgg ctgaatcagt ggcactaacg ccatataaga
     4501 ataagccgct accgcaatcg cacctaataa ttcaggggca agtttgctgg caagataaat
     4561 cgcggtcggg ccatctgccc cgccgataat cccaatcgca gcggcttgtg gcaatgtgaa
     4621 gtcgataatg cctaaccagt ttagccctaa tgcacccagt acggtagcaa aaatcccaaa
     4681 ttgagccgca gccccaagca ttaacattcg agggttggca agtaaagggc cgaaatcagt
     4741 catcgccccg acacccataa agataataag cggagcaacg ccgtagccga tagcaacttt
     4801 atagaataat gccaacacac cggcggtata gcccatatcg ccagccatta cttcaagctc
     4861 attttgaaca gagggagcag ccagtgcgat ggcatcttta atcgaatgca gatcaaggct
     4921 tgtactattt accttagcag caataattgc cagttgctcg gcagaaccgc tgtggagtaa
     4981 attgtctaat gccgtcattg ccatacctgc ttccggaatg tttgacatca aaccaccaaa
     5041 gccaataggc agtagtaaaa gcggttcgaa ttttcgggcg atggcaagcc aaagcaacac
     5101 taaactgatg acaatcataa tcgcttgccc cagttctaaa tgcattagcc ccataccttt
     5161 aaaaagtgca ataatacttt ccataccgga ctcctaggca atactcatta aagtatcatt
     5221 taccgccaca acatcgcctt gtttgacatt aatgccttga atcgtgccgg attttgccgc
     5281 acaaatttgg gtttccattt tcattgcttc aagaatcagt aacacatcgc cttcagcaac
     5341 ttgttgcccc tctttcactt ccactttcaa aatgttccct gccattggag cattcaccgg
     5401 ttcggcattg gctgatagcg tatttgcaga ttttggtgca gaatcgaccg cttgcggagc
     5461 cggtgttgct ggtgttggag cgatattggt tatatcgcca ccttcactca ccttcaccac
     5521 aaaggctttg ccttcaagct caacggtata aatggctgaa ccggattgtg tttgggcttt
     5581 tggtgcagaa gcagcggagg cttgtgccgg ttttgcttca tcagcacttg gcactggctc
     5641 aaaggcagac ggattattgc ggttttccaa atatttccag cccacttgtt ggaagagtgc
     5701 cacaatcaat acatcatcaa tcatgttttc agatagcgta atgccttttt cttttgcact
     5761 tgcagtcact tctgccacta atttttccag ttccggcgga agatgatcgg ctgggcggtc
     5821 ggtaatcggc tctgctccct caagcactct gtcttgcaag gctttgttta ccggtgccgg
     5881 tgtgcgacca tattcgcctt ttaaaatacc tgcagtttct ttggcgatag ttttataacg
     5941 ttcgcccatt aatacgttca tcaccgcttg tgtgccgaca atttgtgagg ttggtgtcac
     6001 caacggaata ttgcctaaat cttcacgcac acgaggaatt tcttgtaaaa ccaagtctaa
     6061 tttatccgac gcattttgtt gcttgagttg gctttcgagg ttggtcagca tgccacccgg
     6121 cacttgggca accaaaatac ggctatctat accacggagc tgtccttcaa attttgcata
     6181 ttttttacgc acgttacgga agtaggcaga gattttctcc agagctggaa tgctcaagcc
     6241 ggtttcatac ggcgtgcctt gaagtgtggc gacaatagac tcggttgccg ggtgaccgta
     6301 agtgccggac attgatgaaa tggaggtatc gacaccatcg acaccggctt caatcgcttt
     6361 gagcaacgcc atttcagcca taccggtggt tgaatggcaa tggagatgta gctcaacgtc
     6421 gtagcgtttt ttaatttcgc tgactaattc ataggctgcc attggggtta aaatgcccga
     6481 catatctttg atcaccaacg aatccacgcc aatttccaat aattgctcgg ttacatccaa
     6541 ccacgtttgt agggtatgaa cagggctggt ggtgtaactc aaagtacctt gtgcgtgccc
     6601 gccgtgtttt ttgaccgctt gtaatgcggc ttgcatattg cgagggtcgt tgagggcatc
     6661 aaatacacgg aacacactca taccgtttgc caccgaacgc tcgacaaatt tatctaccac
     6721 atcgtcggca taatgacgat aacccaataa gttttgccca cgtagcagca tttgcattgg
     6781 ggttttcggc attgcttttt tcagctcacg taaacgcacc cacggatctt cgcctaaaaa
     6841 acgaatacaa ctgtcaaaag ttgccccgcc ccaagtttct aacgaccaat agccgatatt
     6901 atccagctcg gaggcaatcg gtaacatatc gtctaagcgt aaacgagtcg caaaaaggga
     6961 ttggtgtgca tcacgcaaaa ccacatcggt aatcgcaatt tttttcggtt gagttgtcat
     7021 aatcaaattc cttctaatta ttttattttt gaaatcttgt taatgttgcc cgttaattcg
     7081 acgatgatga gcaatcgcag cggcaatcac agggcgtaaa cgctctaaat catctggggg
     7141 agattgaggc acagttttag aggctggaat agaaacaggt tcg
//
LOCUS       DANLTI010000128         7130 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.129, whole genome shotgun sequence.
ACCESSION   DANLTI010000128 DANLTI010000000
VERSION     DANLTI010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7130
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.129"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..568
                     /gene="nfuA"
                     /locus_tag="PXB09_002227"
     CDS             <1..568
                     /gene="nfuA"
                     /locus_tag="PXB09_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDL5234298.1"
                     /translation="SDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAECGVSYCPPNA
                     VEETDTEFKFNRFSAFVDDISLPFLDEAEIDYVTDPMGSQLTLKAPNAKMRKVADDAP
                     FIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSMVDVTLKEGIE
                     KQLLAMFPDELVGVKDITEHQHGEHSYY"
     gene            complement(736..2373)
                     /gene="pyrG"
                     /locus_tag="PXB09_002228"
     CDS             complement(736..2373)
                     /gene="pyrG"
                     /locus_tag="PXB09_002228"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDL5234299.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLASILEARGLNVTIMKLDPY
                     INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRSKMSKANNFTSGKIYSEVLRK
                     ERRGDYLGATIQVIPHITNEIKARVLEGGKGRDVAIVEVGGTVGDIESLPFLEALRQL
                     AVDIGREKTLFMHLTLVPYIPTAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPE
                     NEKKKIALFCNVPERAVISLKDVDSIYRIPELLKSQGLDSFVCDRFRLDCKEADLSEW
                     EQVLYCQANPTGEVTIGMVGKYVELPDAYKSVNEALKHAGLTHRLTVNIKYIDSQDIE
                     TKGTELLAGLDGILVPGGFGYRGVEGKIRTAQYARENKIPYLGICLGMQIALIEYARN
                     VAGLTEANSSEFDKDCSQPVIGLITEWQDAEGNVETRSDESDLGGTMRLGSQQCHLIE
                     GSKARELYGAETIVERHRHRYEVNNKLLPQIEAAGLKVSGLSADRKLVEIIEVPNHPW
                     FIAAQFHPEFTSTPRDGHPLFAGFVKAAKDHQESRKA"
     gene            2637..3686
                     /gene="ansB"
                     /locus_tag="PXB09_002229"
     CDS             2637..3686
                     /gene="ansB"
                     /locus_tag="PXB09_002229"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDL5234300.1"
                     /translation="MKIKKLLLPTLLSIATMPIQAADLPNITILATGGTIAGSQKNTA
                     TSAYQAGQLNIETLIEAVPDIKKLANIKGEQIVKIGSQDMSDEVWLKLAKAINQQCPN
                     TDGFVITHGTDTMEETVYFLDMTVKCEKPVVLVGAMRPATEKSADGVLNLYNSVVVAK
                     DSKSSGRGVLVAMNDIVLGARDVTKTSTTSVQTFNSPNFGALGYIHNSKVDYERSPES
                     KHTVNTPFKVDELTELPKVGIIYAYSNMPTEPLQALLDASYQGIVVAGVGNGNMNAAN
                     LALLEEAAKKGITVVRSSRVPTGYTTRDAEIDDSKYGFIASGTLNPQKARVLLQLALT
                     QTNDIKTIQQYFEDF"
     gene            complement(3760..4404)
                     /locus_tag="PXB09_002230"
     CDS             complement(3760..4404)
                     /locus_tag="PXB09_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234301.1"
                     /translation="MRIWQKLASVIVVTLGLISNASAENFKLKYSSNYLMPAYINFNN
                     GGGQYNIQAKINVPLYNIVFSAKGTEKNEQFHMLSYRDTRNGKTYAMAEIDSKTVKYG
                     KVKEPLKEEALTMPTYDLFTTAFQLSYYDKLPSSFQTTNGKKLYPTPNVQLRKAQKEV
                     KVGGKTYQEITYKFRTSDKKDITVKKFEGEKFPRYIAYSRDGDNYELTFDSFVK"
     gene            complement(4405..5388)
                     /gene="cysB"
                     /locus_tag="PXB09_002231"
     CDS             complement(4405..5388)
                     /gene="cysB"
                     /locus_tag="PXB09_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDL5234302.1"
                     /translation="MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESEL
                     GINIFERNGKHVKGLTPAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNT
                     QARYMLPSVIEKFKARYPEVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVL
                     LPCYWWNRSVIVKPEHPLAAFVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKE
                     GILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTETDKDLVAINASHLFQPSMTQIA
                     FKRGTFLRNYMYDFINYFSPHLTRVQVEKAEQLRDNNAISRLFESISLEEK"
     gene            complement(5385..6068)
                     /gene="yjjG"
                     /locus_tag="PXB09_002232"
     CDS             complement(5385..6068)
                     /gene="yjjG"
                     /locus_tag="PXB09_002232"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDL5234303.1"
                     /translation="MKYQWVLFDADETLFSFNSYLGLKAMLARYQIDFSEQDYQDFQA
                     VNKPLWVAYQNNEITAQDIQTRRFVKLSAQTGVDPLQLNQELMAEMAFVSQPLEGVMD
                     MLNALYGKVKMGIITNGFTDLQQKRLDNTQTSHFFDIVVISEQIGAAKPDRQVFDYAF
                     ALMDEFDRTKVLMVGDTLASDILGGNNAGIDTCWLNLLSKENDTDIKPTYEVHTMQQI
                     IAIVEGKSL"
     gene            complement(6144..7037)
                     /locus_tag="PXB09_002233"
     CDS             complement(6144..7037)
                     /locus_tag="PXB09_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HDL5234304.1"
                     /translation="MNKKLPPLNALKAFESAARHLNFTKAAEDLFVTQAAVSHQIKLL
                     EDFLGASLFHRRNRLLELTELGAQYFYEVQPLLEQIALATDKIRQQSSRQILTISVPQ
                     TFGMHWLVPRLADFHEKYPEVEVRIKGVDQDEGLLGKETDVAIYYGKGDWQGLESIRL
                     TESRIVILASPEYLSQNTIHLPADLAGKHLLHSSTHNKWKRMVEHLHIEDIVDAETGS
                     IFSHTFMVLQAAMHQQGIAIANQLLAQHEIEKGTLIEPFPTTLFDEKSFYVVYPSQSA
                     QVQKVQFFVEWIQQKMKECCA"
BASE COUNT         2161 a         1519 c         1301 g         2149 t
ORIGIN      
        1 atcagatgca gcacaagccc attttgccag actattagaa cagcaagaag agggaactaa
       61 tatccgtatt tttgtggtca atcccggcac accgggggca gaatgcggtg tctcttactg
      121 cccacccaat gcagttgaag agacggatac cgaatttaaa tttaaccgtt tctctgcatt
      181 tgtcgatgat attagcttac cgtttttaga cgaagcggaa attgattatg taaccgaccc
      241 aatgggttca caacttaccc tcaaagcccc taacgccaaa atgcgtaaag tggctgatga
      301 tgcaccgttt atcgagcgtt tagattatgt gattcaaacc caagtcaatc cacaacttgc
      361 cagccacggc ggtaaagtga ccttaattga aatcaccgaa gataaatatg ccgtgctaca
      421 attcggcggt ggttgtaacg gttgctcaat ggtggatgtg accttaaaag agggaattga
      481 gaaacagctt ctggcaatgt tccctgatga attagttggt gtgaaagata ttaccgaaca
      541 ccaacacggt gaacattctt actattaaaa atactaaaag ggataaatca ttgatttatc
      601 cctttcttat aattaatgag caagcggtca aatttactcg ctttcgctcg cacttcgtgc
      661 catcagcaaa gccgatgttc aaacgcaagc gtttgtacaa aaaaatgagt aaattcgacc
      721 gcttgttaag tttgattaag ccttacgact ctcttggtga tctttcgcag ctttcacaaa
      781 acctgcaaat aatggatgac catcacgcgg agttgaggta aattccggat ggaattgtgc
      841 tgctataaac caagggtgat ttggcacttc aataatttcc actaatttac gatctgccga
      901 taaaccgctc acttttaagc ctgccgcttc aatttgtggt aacagcttat tgtttacttc
      961 gtaacggtgg cgatgacgtt caacaatcgt ttccgcacca tataactcac gagcttttga
     1021 gccttcaatt aaatggcatt gttgtgagcc taaacgcatt gtaccaccta aatctgactc
     1081 atcgctgcgg gtttccacat tcccttccgc atcttgccat tcggtaatta agccaatcac
     1141 cggctgtgag caatctttat caaattcaga agaatttgcc tcggttaaac ctgccacatt
     1201 acgggcatat tcaattaggg cgatctgcat acctaaacag atacctaagt aaggaatctt
     1261 gttttcacgg gcatattgtg cggttcgaat tttgccttcc acgccacgat agccaaagcc
     1321 gcccggcaca agaatgccgt ctaagcctgc caataactct gtgcctttgg tttcaatatc
     1381 ttgtgaatca atgtatttaa tattcactgt taaacgatgc gttaaacctg cgtgtttcaa
     1441 agcctcattc accgatttat acgcatcagg taattccaca tattttccga ccataccgat
     1501 agtcacttcg ccggttgggt ttgcttggca gtatagcact tgttcccact ctgaaagatc
     1561 ggcttctttg caatctaaac ggaaacgatc gcacacaaag gaatctaacc cttgcgattt
     1621 caataattcc ggaatgcgat aaatcgaatc tacatcttta agcgaaataa ccgcacgctc
     1681 cggcacatta cagaaaaggg cgattttttt cttctcattt tccggaatag cacgatctga
     1741 acggcaaatt aacacatccg gctgaatacc gattgaaagc aactctttta ctgaatgctg
     1801 agtcggctta gttttcactt cccctgcggt tggaatataa ggcactaagg ttaaatgcat
     1861 aaacaaggtt ttttcacgac cgatatccac cgctaattgg cggagtgctt ctaagaatgg
     1921 cagtgattca atatccccca ccgtgccacc tacttctaca atggcgacat cacgcccttt
     1981 accgccttct aacacacggg ctttaatctc gttggtaata tgcggaataa cctgaatggt
     2041 tgcacctaaa tagtcgccac ggcgttcttt acgcaacact tcagagtaaa ttttaccgct
     2101 ggtaaagttg ttggctttgc tcatttttga acggataaaa cgctcgtagt gacctaaatc
     2161 caaatcggtt tccgcaccgt cttcggtcac aaatacctcc ccgtgctgag ttggactcat
     2221 tgtacccgga tcgacattga tataaggatc aagcttcata atggttacat ttaaaccacg
     2281 agcttccaga atagatgcta aagaggctgc cgcaataccc ttccctaaag aagatacaac
     2341 accgcctgtg acgaaaatat aattcgttgt cattgtgatt gcctttgctg attgattagg
     2401 ttggaaattc agaatatcag tttacttcgt aaaaaagaaa ctatcaggac gggaaagtag
     2461 tttacatcaa attacatttt tttgctaatg gaaaatcggc aagcagtcag attaattctt
     2521 ttttcaataa tgccgactaa tcttaattaa tacactatta tttgcgatag atcagaatta
     2581 acctacatgt ttatagatat cataatacct gtttttctaa tactggagac gatacaatga
     2641 aaatcaaaaa attactactg ccaactctgt taagcattgc tactatgcca attcaagcag
     2701 ccgacctacc taatattaca attcttgcaa ctggagggac aattgccggt agccaaaaaa
     2761 atacggcaac ctcagcttat caagctgggc agctaaatat tgaaacactc atagaagccg
     2821 tcccggatat taaaaaatta gcaaatatca aaggagaaca aatcgttaaa atcggatctc
     2881 aggatatgtc tgatgaagta tggctaaaac tggcaaaagc aattaatcaa caatgcccaa
     2941 acacagatgg cttcgttatt acgcacggca cagacactat ggaggaaacc gtatacttcc
     3001 ttgatatgac tgtaaaatgc gaaaaacccg tagtattagt gggggccatg cgaccagcaa
     3061 ctgaaaaaag tgccgacggc gtattaaatt tatataactc agttgttgtc gccaaagatt
     3121 ctaaatctag tggcagaggg gtgttggttg caatgaatga tattgtattg ggcgctcgcg
     3181 atgttacaaa aaccagtact acatcagtgc aaacatttaa ctcaccaaac tttggcgcac
     3241 taggctatat ccataatagc aaagttgatt atgagcgctc tcctgaaagt aaacacaccg
     3301 taaacacccc tttcaaagta gatgaattaa cggaattgcc aaaagtcggc attatttatg
     3361 cttattcaaa tatgccaacc gaaccgcttc aagcattatt agatgcgagt tatcaaggca
     3421 tcgtggttgc aggagttggc aatggcaata tgaatgcggc taatttggct ttacttgaag
     3481 aagcagctaa aaaaggaatt accgtggttc gctcgtctcg agtgccaacc ggatatacta
     3541 cccgagatgc agaaattgat gatagcaagt atggttttat tgcttccggc acattaaatc
     3601 ctcaaaaagc tcgagtatta ctgcagctcg ccttaacaca aacaaatgat ataaaaacta
     3661 ttcaacaata ttttgaagat ttctaaaaag taaataacaa gcggtctatt ttgcaaaaca
     3721 aatcacaaaa tagaccgctt gtctcattac taatctttat tattttacaa agctatcaaa
     3781 agttagctca taattgtcgc catcacgact ataggcgata tagcgaggga atttttcacc
     3841 ttcaaatttt ttcaccgtaa tgtctttttt atcactggtt ctaaacttgt aggtaatttc
     3901 ttggtaggtt ttgccgccta cttttacctc tttttgggct ttgcgtagct gcacattcgg
     3961 tgttgggtaa agttttttac cgttagtagt ttgaaaactg ctcggtaatt tatcgtaata
     4021 gctcaactga aaggctgtgg tgaacaaatc ataagttggc atagtcagcg cttcttcttt
     4081 tagtggctct ttcactttgc catattttac cgttttagaa tcaatttctg ccatcgcata
     4141 agttttgccg ttacgggtat ctcggtagct caacatatga aattgttcgt ttttttctgt
     4201 tcccttcgca gaaaagacaa tattatataa aggcacatta atttttgcct gaatattata
     4261 ttggccacca ccgttattaa agttaatgta ggctggcatt aaataatttg agctgtattt
     4321 caacttaaaa ttctccgcac tggcgtttga aatcaagccc aaagtgacca cgattacgct
     4381 cgctaacttc tgccaaattc tcatctattt ctcctctaaa gatatacttt cgaacaacct
     4441 tgaaattgca ttgttatctc gtaattgttc cgctttctcc acttgtaccc gtgttaaatg
     4501 tggcgaaaaa taattaataa aatcatacat atagttacga agaaaagttc ctcgtttaaa
     4561 ggcgatttgc gtcatactcg gttgaaacag gtgacttgca ttgatagcga ctaagtcttt
     4621 atccgtttcc gtatgtgcca ttgatgccat aataccaacc cctaagccta agcgtacata
     4681 agttttgatt acatcagcat ctgtcgccgt aaatacgata ttaggcaaaa taccttcctt
     4741 attgaaggca tgatctaaat ccgattgccc tgtaaaacca aaagtatagg ttatcaaatc
     4801 atatctacct aattgttcga cagtcaaatt tttactttgg ttcacaaaag ccgcaagagg
     4861 atgctctggt ttgacaataa ctgaacgatt ccaccaataa cacggcaata aaaccgcttc
     4921 atcaaataaa tattgagctt ctgtggtaat ggctaaatcc acttctccag ccaccaaagc
     4981 atcataaatt tgattcgggg agccttggtg caaatgcaaa cttacttcag gatagcgagc
     5041 cttaaacttc tcaattacac tcggtagcat ataacgggct tgggtattgg tggtcgcaat
     5101 gcgtaagatg cctttgttgg gtcgagtttg ttcttcagca accgatttaa tgctctgggc
     5161 ttttaccaat aattcacgag caatcgccac aattttttca ccagcaggcg ttagcccctt
     5221 aacgtgctta ccgttacgct caaaaatatt aattcccaac tcactttcca acaaacgaac
     5281 ttgtttgcta atccccggtt gagaagtgta aagcacctct gcggcctcgg taatattcaa
     5341 gttctggttt actatttcaa cgatataacg taactgttgt agcttcataa tgatttcccc
     5401 tctacaatcg caataatctg ttgcatcgta tgcacttcgt aagttggctt aatatccgta
     5461 tcattctctt tactaagcaa atttaaccaa caagtatcaa ttccagcatt attacctcct
     5521 aaaatatcag aagcgagggt atcgcctacc ataagcactt tagtacgatc aaattcgtcc
     5581 attaatgcaa aagcgtaatc aaacacttgg cgatcaggct ttgcggcacc aatttgttct
     5641 gatatcacta caatatcaaa aaaatgtgaa gtttgagtat tatctaaacg tttttgctgc
     5701 aaatcggtaa aaccattggt gataatgccc atttttactt taccatataa agcatttaac
     5761 atatccatta caccttctaa aggctgactg acgaatgcca tctccgccat taactcttga
     5821 ttaagttgta gcggatctac gcctgtttga gcagataatt ttacaaaacg tctggtttga
     5881 atatcttgag cagtgatctc attattttgg taagccaccc aaagtggttt atttaccgct
     5941 tgaaagtctt gataatcttg ttcactaaaa tcaatttggt aacgagccag catcgctttt
     6001 aaaccaagat aagaattaaa tgaaaacaag gtttcatcag catcaaataa tacccattga
     6061 tatttcataa tattcctttt ttaacttaga taacaagcgg tcaaattttt ctaatttttc
     6121 gcataccgct gataaagcca cgcttaagca caacactctt tcattttttg ctgaatccac
     6181 tcaacaaaaa attgtacttt ctgaacttgg gctgattgcg aaggatagac aacatagaac
     6241 gatttttcat caaacaatgt ggttgggaaa ggctctatta aagtaccttt ttcaatttcg
     6301 tgctgtgcca acaactggtt ggcaatcgca atgccttgtt ggtgcattgc agcttgaagc
     6361 accataaaag tatggctaaa aattgagcca gtttccgcat ctactatatc ttctatatgc
     6421 aaatgttcaa ccattctttt ccacttatta tgggtggagg aatgtaataa atgcttacct
     6481 gctaaatccg ccggtaaatg aatggtattt tgcgataaat actcaggcga agctaaaata
     6541 acaatacggg attccgtcaa acggatagat tccagacctt gccaatcccc cttaccataa
     6601 taaatagcaa catctgtttc tttacctaat aatccctcat cttgatcaac acccttaata
     6661 cgtacttcca cttctggata tttttcgtgg aaatccgcca aacgtgggac taaccaatgc
     6721 ataccaaatg tttgtggtac gctaatagtc agaatttgac gactactttg ctgcctaatt
     6781 ttatctgttg cgagagcaat ttgttctaat aatggctgaa cttcatagaa atattgtgcg
     6841 cctaactcag ttaattccag caaacggtta cggcgatgga acagggaagc acctaaaaaa
     6901 tcttctaata gtttaatttg gtggctcact gcagcttgtg tgacgaagag atcttctgcc
     6961 gctttagtaa aatttaaatg gcgtgcagca gattcaaatg ctttcaatgc attgagtggt
     7021 ggaagttttt tgttcataat ttttcaatct aatagattac taaacaagca actctattat
     7081 tttttctgat agtttaaata aaaaaaattc gtttgatgct tgcaaataga
//
LOCUS       DANLTI010000129         7032 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.130, whole genome shotgun sequence.
ACCESSION   DANLTI010000129 DANLTI010000000
VERSION     DANLTI010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7032
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.130"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            7..1383
                     /locus_tag="PXB09_002234"
     CDS             7..1383
                     /locus_tag="PXB09_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDL5234305.1"
                     /translation="MLSNEVFISIIVLLILSLLRINVVIALIISALTCGLIGNLGVEG
                     AGFTEALEKTIKSFTGGLGGGAETAMNYAVLGAFAVALSKSGVTDLLAYKVIKSFGHS
                     PSGRSVTWFKYIVLFVLVAFAMSSQNLIPIHIAFIPILIPPLLSVMNKLQIDRRAVAC
                     ALTFGLTATYMLIPAGFGQIFIESILVKNINQAGEPFQLVTTTAEMTKAMLIPVSGMI
                     LGLLFAFFVSYRKPRVYIENMPEPTADDIEARVANVKPFHIGISIVAIIATCSVQLAT
                     NSTIIGGLVGLVIFALGGVFRLKESNDVFQAGLRLMAMIGFVMIAASGFAGVVNSTGG
                     VPALVESLRDVISSKEMAALLMLVVGLFITMGIGSSFSTVPIITSIYVPLCISFGFSP
                     LATMAIVGVAAALGDAGSPASDSTLGPTSGLNADGKHDHIWDSVVPTFIHFNIPLLVF
                     GWIAAMTL"
     gene            1481..2284
                     /gene="xthA"
                     /locus_tag="PXB09_002235"
     CDS             1481..2284
                     /gene="xthA"
                     /locus_tag="PXB09_002235"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDL5234306.1"
                     /translation="MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPY
                     DLVNHLGYHVFHHGQKGHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGV
                     LTVLNGYFPQGENRSHETKFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLD
                     IGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSK
                     GFDDNRGLRIDLILASKSLAERCVETGIDLDIRAMEKPSDHSPVWATFK"
     gene            2438..3022
                     /gene="lptC"
                     /locus_tag="PXB09_002236"
     CDS             2438..3022
                     /gene="lptC"
                     /locus_tag="PXB09_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDL5234307.1"
                     /translation="MNKRLTVILLIIVAVLGGWYYSLQEKENTGLDQLIKKEGQPEYV
                     GNKMSTTVYDLKGNPQYFAQATEIKRYESTERTEFFKPFIELFAKESTQKQWKVSADY
                     AEITKEKMLNLKGNIKLVALDPASRLQQITTDTLTVDLNTQDIFTESTVKSIGSGFTT
                     TGVGLKGNLKQQVATLQKDVKSYIEPTIIQETKE"
     gene            3046..3552
                     /gene="lptA"
                     /locus_tag="PXB09_002237"
     CDS             3046..3552
                     /gene="lptA"
                     /locus_tag="PXB09_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDL5234308.1"
                     /translation="MKLMFKSILVSVLLGSSFSAYALKGDTDQPINIDSGSQSLDMTN
                     NIVTFSDNVVITQGSIKVTAANVKITRQEGKKETIDATGSPVTFQQTLDNGKPVNGKG
                     NSVHYDLNSEFLTLIGNAELKQQGSFIKANKITYDVKKQQLKATSGGKTRVKTVLIPN
                     ELQDNKKK"
     gene            3564..4289
                     /gene="lptB"
                     /locus_tag="PXB09_002238"
     CDS             3564..4289
                     /gene="lptB"
                     /locus_tag="PXB09_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005727816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDL5234309.1"
                     /translation="MSVLYAEHLAKSYKQRQVVKDVSLNVKSGEIVGLLGPNGAGKTT
                     TFYMVVGLVRHDHGTIRIDDQDISTLPMHDRAKQGIGYLPQEASIFRRLSVYDNLMSV
                     LQVRKNINDKQRKERAEELITEFHIEHIRNSLGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKKIIVNLKERGLGVLITDHNVRETLDVCERAYIVGSGEMIAS
                     GTPQQVLENPDVKRVYLGDQFKL"
     gene            4331..4843
                     /locus_tag="PXB09_002239"
     CDS             4331..4843
                     /locus_tag="PXB09_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5234310.1"
                     /translation="MTKLTEFLSPENVRQGVLISSKKRALELVGKIVAESINQTEQQS
                     EALCPIECFGNLFKREKLGTTGLNQGIALPHAKLPACGDIELTKPIAVFLQLEEAIDY
                     EAQDNKEVDLIYAMMFPENSCEQYKSCLPAIAQKLTDKSLLKQLRAAESAEDIWQILV
                     YADNHLKDEE"
     gene            4856..5719
                     /gene="rapZ"
                     /locus_tag="PXB09_002240"
     CDS             4856..5719
                     /gene="rapZ"
                     /locus_tag="PXB09_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDL5234311.1"
                     /translation="MELIIISGRSGSGKSVALRALEDAGYYCVDNIPLPLIPTLTYYL
                     TQENRSAVISLDIRNLPNTPNAIEELLTQLEPLNAKLIFLDCERNTLIRRYSDSRRIH
                     PLSTQDDLSLEGALDLEQKLLEPLVQNANYIIDTSHLSSHELAENLRQILQGSTEKEL
                     KIIFQSFGFKYGLPADSDYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNF
                     IYQTRNYLEMWLPMLEQNNRSYLTIAIGCTGGKHRSIFIAEQLAKYFQAKGKNVQVRH
                     KSLEKHHKKTS"
     gene            5802..6986
                     /locus_tag="PXB09_002241"
     CDS             5802..6986
                     /locus_tag="PXB09_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5234312.1"
                     /translation="MKSADIVIVGGGMVGLALAGLLKDVDCQIKIIEKNTPKFDADTI
                     YHRVSAINASSQKILEQIGAFQHIPAQRLSPYTEMKVWEKDSFANIHFDNNDNEIKQL
                     GLSQLGFILENAVIQHALWQQVSQQANVEYIIAAPQTLGVSENGAFLTLDNGEMLSAK
                     LVVGADGANSWVRNQMKMPLTSKDYQHTALVCNVKTTEKHGKTARQIFAEDSIFAFLP
                     MADEHLCSIVWSLPPNKANELKNASEAEFNKALTIAFDNQLGLCEVQSLREIYPLAAR
                     FCRDFAQPRIALIGDAAHTIHPLAGLGVNLGFADARTLANEIQKQLVNNQDIGEYRHL
                     RQFERERKAQAMKLLATMEGLKQLFDGNHPLKKLFRGIGLSLTNQLPFVKKQLIQQAI
                     YL"
BASE COUNT         2148 a         1438 c         1445 g         2001 t
ORIGIN      
        1 aacacaatgt tatcaaacga agtctttatt tcgattatcg tgctgttaat cctaagcttg
       61 cttagaatta atgtagtaat cgcacttatt atttctgccc ttacttgcgg tctaatcggt
      121 aatcttggtg tagaaggggc tggatttacc gaagcattgg aaaaaacaat aaaaagtttt
      181 actggtggtt taggtggggg tgcggaaact gctatgaact atgccgttct tggtgcgttt
      241 gccgtagctc tatcaaaatc aggcgtgacc gatttattag cctataaagt gatcaaatcc
      301 tttggtcaca gcccgtcagg tcgctccgtt acttggttta aatacattgt attatttgtg
      361 ttagtggcat ttgcaatgtc atctcaaaac ctaattccaa ttcatattgc ctttattccg
      421 attttaattc caccgctatt aagcgtaatg aataaattgc aaattgaccg ccgtgcggta
      481 gcttgtgctt taacctttgg tttaaccgcc acttatatgt taattccggc aggtttcggt
      541 cagatcttta ttgaaagcat cttagttaaa aatatcaacc aagcaggtga accgttccaa
      601 ttagtgacta ccacagcgga aatgaccaaa gcgatgttaa ttcctgtttc cggtatgatt
      661 ttaggcttac tgtttgcatt ctttgtgtca taccgtaaac cgcgtgtgta tattgaaaat
      721 atgcctgaac caaccgcaga tgatattgaa gcccgtgttg caaacgttaa gcccttccat
      781 atcggcatta gtattgtggc gattatcgcg acctgttcgg tgcaattagc aacaaattcg
      841 actattatcg gcggcttagt cggtctggtt attttcgcct taggcggtgt atttagactg
      901 aaagagagta acgatgtctt ccaagctggc ttacgtttaa tggcgatgat tggctttgtg
      961 atgattgccg cctccggttt tgccggcgtg gtcaattcaa caggcggtgt gccggcattg
     1021 gtagaaagcc tgcgtgatgt gatttcatca aaagaaatgg cagcattgct aatgttagtc
     1081 gttggcttat ttattacgat gggtatcggc tcttcattct cgactgtgcc gatcattacc
     1141 tcaatttatg tgccgctttg tatctcattt ggcttctcgc cactggcgac aatggcgatt
     1201 gtcggtgttg ctgctgcact cggtgatgca ggttctccgg catcagattc cacacttggt
     1261 ccaacctccg gcttgaatgc tgacggtaaa cacgaccaca tttgggattc tgttgtacca
     1321 acttttatcc actttaacat tccattatta gtgttcggct ggattgcagc aatgacactt
     1381 taagctataa tatgcaaaat ttttgctaaa aatgaccgct tgtagccatt acaagcggtc
     1441 tattttcttc tttattttgc aaaccacatt aggatcacca atgaaattta tctcttttaa
     1501 tatcaacgga ttacgagcca gaccacatca gctcgaagcg attatcgaaa aacaccagcc
     1561 cgatgtactc ggcttacaag aaatcaaagt tgccgatgaa gattttcctt acgatttagt
     1621 caatcactta ggctaccacg ttttccacca cgggcagaaa ggtcattacg gcgtggcatt
     1681 actgactaaa aaagagccta tagcggtgcg taaaggcttc ccgacagatg tacttgatgc
     1741 tcaaaaacga atgattatgg cggatatcga gaccgatttc ggcgtgctaa ccgtattaaa
     1801 cggctatttc ccacaggggg aaaatcgcag ccacgaaacc aaattcccgg caaaacaaaa
     1861 attctatgct gatttgcaga actacttgga aagcgaatta aagccggaaa atccgattat
     1921 tattatgggc gatatgaaca tcagcccgac tgatttggat atcggcatcg gcgagccaaa
     1981 ccgcaaacgc tggctgcgtg acggtaaatg ttcattctta cccgaagagc gtgaatggct
     2041 agatcgctta tacagctacg gcttggttga tactttccgt gcaggcaacc cagacgtgaa
     2101 cgataagttc tcttggtttg actaccgttc aaaaggtttt gatgataatc gtggcttgcg
     2161 tattgattta attcttgctt caaaatcact tgctgagcgt tgcgtggaaa caggcattga
     2221 tttagacatt cgagcaatgg aaaaaccgtc tgaccactcc cctgtttggg caacctttaa
     2281 ataaagttgc aaaaaaatct gagttttcaa ccgcttgtca gtttttagcc ctacaagcgg
     2341 ttattttttc tcactttttt gcacttttta cgctgtacta tatccctatt caaatctgtg
     2401 ctacaatcaa acactatttt tagattattt ttggattatg aacaaacgtt taaccgttat
     2461 tttactgatt attgttgccg tacttggtgg ctggtattac agcttacaag agaaagagaa
     2521 tacggggctt gatcagctta ttaaaaagga aggacagcct gaatatgtgg ggaataaaat
     2581 gtccaccacg gtctatgatc taaaaggaaa cccacaatat ttcgctcaag ctactgaaat
     2641 taaacgctat gagtctactg agcgtactga gttttttaaa ccttttattg agctttttgc
     2701 caaagagtcg acgcaaaaac agtggaaagt cagtgccgat tatgcagaaa ttaccaaaga
     2761 aaaaatgtta aatttaaaag gtaatatcaa acttgttgca ttagatcctg catcacgttt
     2821 gcaacaaatc actaccgata cgttaactgt tgatttaaat acacaggata tttttaccga
     2881 aagtacggtc aaatcgatag gttccggttt tactacaacg ggggttggat taaaaggtaa
     2941 cttaaaacaa caagttgcga ctttgcaaaa agatgtaaaa tcttacattg aaccgaccat
     3001 tattcaagaa actaaagaat aatttgcttg gaacaaggaa taacaatgaa attaatgttt
     3061 aaatctattt tagtgagcgt gttactgggt agcagctttt ccgcttatgc tctaaaaggc
     3121 gataccgatc agccgattaa tattgattca ggtagccaat cgttagatat gactaacaat
     3181 atcgtgacct ttagcgataa tgtcgttatc actcaagggt cgattaaagt gaccgcagca
     3241 aacgtcaaaa ttacccgtca agaaggtaaa aaagaaacta ttgacgctac aggctcacct
     3301 gtaacattcc aacaaacctt agataacggt aaaccggtaa acggtaaagg caacagcgtt
     3361 cattatgatt taaactctga atttttaacg ctgattggca atgcggaact caaacaacaa
     3421 ggtagcttta ttaaagccaa taaaattacc tatgatgtga aaaaacaaca acttaaagct
     3481 accagtggcg gtaaaacccg agtgaaaacc gtgctaattc caaatgaact tcaagataac
     3541 aagaaaaaat aaggttaaat gatatgtctg tgctttatgc cgaacattta gcaaaaagct
     3601 ataaacaacg ccaagtggta aaagacgtca gcctgaatgt caaatcaggt gaaatcgtgg
     3661 gcttgctcgg tccgaacggc gcaggtaaaa ccaccacttt ctatatggtt gtgggtttgg
     3721 ttcgccacga ccacggcaca attcgtattg acgaccaaga tatcagcaca ctaccaatgc
     3781 acgacagagc aaaacaaggg attggctatc taccgcaaga agcatctatt ttccgccgtt
     3841 taagtgtgta cgataactta atgtcggtat tacaagtgcg taaaaatatc aatgataaac
     3901 agcgtaaaga gcgtgccgaa gagctgatta cagaattcca tattgagcat attcgcaata
     3961 gtttaggtca atcactttca ggtggtgaac gccgccgtgt ggaaattgcc cgagcattag
     4021 cagcgaaccc gaaatttatt ctgttagatg aaccttttgc tggggttgac ccaatctcgg
     4081 taattgatat taaaaaaatt atcgtcaatt taaaagagcg tggtttaggg gtattgatta
     4141 ccgaccataa cgtacgtgaa actctagatg tatgtgaaag agcctacatt gtcggtagcg
     4201 gcgaaatgat tgccagcggc acaccacagc aagtgcttga aaaccctgat gtaaaacgtg
     4261 tttatttagg cgatcaattc aaactctaaa aaatcccctc tttggggatt tcatctttag
     4321 atgaaaaatt atgacaaaac taaccgaatt tctaagccct gaaaatgttc gccaaggtgt
     4381 actgatttca agtaaaaaac gagcgttaga actcgtgggt aaaatcgtgg ctgaatcaat
     4441 caaccaaacc gaacagcaat ctgaagcact ctgccctatt gaatgctttg gcaatttatt
     4501 taaacgtgaa aagttaggca caaccggctt aaatcaaggc attgcacttc ctcatgcaaa
     4561 attgcccgct tgcggtgata ttgagctgac taaaccgatt gcggtctttt tacaactgga
     4621 agaagcgatt gactacgaag cccaagacaa caaagaagtg gatttaattt atgcaatgat
     4681 gtttccggaa aatagctgcg aacagtataa aagttgccta cctgcaattg cacagaaact
     4741 taccgataaa tcgttattaa aacagctccg agcagctgaa tccgcagaag atatttggca
     4801 aattttggtg tatgctgata atcacctaaa agatgaagaa taatactgag gaaatatgga
     4861 attaatcatt ataagcggac gctcaggctc tggtaaatcg gtagcattaa gagcattaga
     4921 agatgcaggt tattactgcg tggataatat ccctttacct ttaattccaa ccttaaccta
     4981 ctaccttact caagaaaatc gttcggcagt catcagctta gatattcgta atttaccgaa
     5041 tacgcctaat gcgattgaag aattgcttac ccagcttgag cctttaaatg ctaagctgat
     5101 ttttttagat tgcgaacgca ataccttaat ccgccgttat agcgattccc gccgaatcca
     5161 cccgctttcc acccaagacg atctctcgtt agaaggtgca ttggatttgg aacaaaaatt
     5221 gcttgagcct ttggtgcaaa atgcaaatta tattattgac accagtcatc tttcttcgca
     5281 cgaattagcg gaaaatcttc gccaaatact gcaaggctca accgaaaaag agcttaaaat
     5341 tattttccaa tcattcggtt ttaaatacgg cttacctgcc gattccgatt acgtttttga
     5401 tgttcgcttt ttaccgaacc cacattggaa tccggagctt cgcccaatga caggcttaga
     5461 gcaaccggtg attgatttct tagaacgcca aaccgaagtg cataatttta tttaccaaac
     5521 ccgcaattat ttagaaatgt ggctgccgat gttggaacaa aataaccgta gctacctaac
     5581 tattgcgatt ggttgcactg gtggaaaaca tcgttccata tttattgccg agcaactggc
     5641 aaaatatttc caagcaaaag gcaaaaatgt gcaagttcgg cataaaagtt tggaaaaaca
     5701 ccataaaaaa acatcttaaa taagtagggg ctggtcctgt gccagccctc atttcaacta
     5761 ttttagggcg ggcacagggc accgccccta catttgattt tatgaaatcc gcagatattg
     5821 ttattgttgg cggcggtatg gttgggctgg ctcttgccgg actgctcaaa gatgtcgatt
     5881 gccaaattaa aattattgag aaaaacacgc ccaaatttga tgccgatacg atttaccacc
     5941 gtgtaagtgc gattaatgct tcaagccaaa aaatactgga acagattggt gcttttcaac
     6001 acattccggc tcaacgcctt tctccttaca ccgaaatgaa agtgtgggaa aaagacagct
     6061 ttgctaatat ccattttgat aataatgata atgaaatcaa gcaattagga ctttcacaac
     6121 ttggctttat tttggaaaat gcggtgattc aacacgcatt gtggcaacag gtttctcaac
     6181 aagctaatgt agaatatatt atcgccgccc cccaaactct gggcgtgagc gaaaacgggg
     6241 catttttaac cttagataac ggcgaaatgc tgtctgctaa attggttgtc ggggcagacg
     6301 gtgcaaattc gtgggtgcgt aaccagatga aaatgccgct taccagtaaa gattatcaac
     6361 ataccgcctt agtctgtaat gtcaaaacaa ccgaaaagca cggcaaaacc gctcgtcaaa
     6421 tctttgctga agatagcatt tttgcttttc tgccaatggc agatgagcat ctctgctcga
     6481 ttgtttggtc gctgccacca aacaaagcca atgaattaaa aaatgcaagc gaagccgaat
     6541 ttaataaagc cttaacgatt gccttcgata atcagcttgg cttatgtgaa gtgcaaagtt
     6601 tgcgtgaaat ttacccgctt gcagcacgct tctgccgtga ctttgcccaa cctcgtattg
     6661 cgttgattgg tgatgccgct cataccattc acccattggc gggacttggt gtcaatttag
     6721 gctttgccga tgccagaacg ctggcaaacg aaatccaaaa acagttggta aacaaccaag
     6781 atattggtga ataccgccat ttacgccaat ttgaacgtga gcgtaaagcc caagcgatga
     6841 aattattagc cacaatggaa ggattaaaac agctatttga cggcaatcac ccgcttaaaa
     6901 aattattcag aggaattggt ttaagcctaa ccaaccagct gccttttgtg aaaaagcagc
     6961 ttattcagca agctatttac ttataaaatg taaatttttt cgaaataacg taaagatgaa
     7021 cgattttatg aa
//
LOCUS       DANLTI010000130         6933 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.131, whole genome shotgun sequence.
ACCESSION   DANLTI010000130 DANLTI010000000
VERSION     DANLTI010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6933
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.131"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..584)
                     /locus_tag="PXB09_002242"
     CDS             complement(<1..584)
                     /locus_tag="PXB09_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5234313.1"
                     /translation="MPNFSFTHLYKKHTKELPTVTLLSALIGLSQVSYANPLPLGNTT
                     GTNNLAVGEGSFALGTGSQAIGKNAIATGGNISPQEFNVELENFRDLVNQIEELRTQI
                     AEQEKQGSVNQQLQDALKSQIAQYDTILERVREKQAQQAILANSVISMRKELVNRRNQ
                     LTELENNFNTSFLTGKNKQEAYQKFSTVIESLDW"
     gene            complement(778..2007)
                     /locus_tag="PXB09_002243"
     CDS             complement(778..2007)
                     /locus_tag="PXB09_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDL5234314.1"
                     /translation="MQFREINPSPRLLMCPGPTDADPRVLRAMSAPILGQFDPEFTSL
                     MNETMEMERRLFQTKNEQTYVVNSTSRGGLETVLTAAICPGDKVLIPAFGRFGYLLNE
                     ILARSGADITIIEREWGTVFEPEEIEAELKKGGYKAVAIIHGETSTSMMQPLEEIGKI
                     CKQYDAMLIVDTVATLGGVDIRVDEWGIDACIGGTQKCISAPSGTALITYNKRIEEII
                     AKRKRVEKGIRAESDVDGTLPPIPSNYLDLAQLQDYWSPRRLNHHTETTSAQYGVHEA
                     LRIILQEGLEARFARHILNDKALCAGLEAMGLKIFGDRKHKAPVVTAFHIPEGMSGPA
                     LRSDILNHFGIELATSFGPLDGKVIRIGNMGFSSQKRNVLLTLGALEAVLLSHKVKVP
                     SGDAVAAALAVYKEADK"
     gene            2280..4073
                     /gene="lepA"
                     /locus_tag="PXB09_002244"
     CDS             2280..4073
                     /gene="lepA"
                     /locus_tag="PXB09_002244"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018345454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDL5234315.1"
                     /translation="MQNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLNYKAKDGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAIEIDLEVVPILNKIDLPAAEPERVAEEIEDIVGIDAIDAVR
                     CSAKTGLGIEDVLEEIVKKMPAPEGDAEAPLQALIIDSWFDNYLGVVSLVRVKNGVLK
                     KGDKIKVMSTGQSYNVDRLGIFTPKQVDTTELKTGEVGWVVCAIKDILGAPVGDTLTH
                     HHNPATEVLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPETSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVVQTSGETIYVDSPSKLPA
                     INNIAEIREPIAECNMLVPQEFLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEV
                     VLDFFDRLKSTSRGYASLDYGFKRFQTADMVRVDIMINGERVDALAIIVHRANAAYRG
                     RELVEKMRELIPRQQFDIAIQAAIGNHVIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ
                     KQKEGKKRMKSLGNVEVPQEAFLAILHVGKD"
     gene            4160..5119
                     /gene="lepB"
                     /locus_tag="PXB09_002245"
     CDS             4160..5119
                     /gene="lepB"
                     /locus_tag="PXB09_002245"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDL5234316.1"
                     /translation="MAQFMPIIFLGIIYGIWQWLDSMQLPNTISIILVALVIICGGFW
                     AFYKFSADPRRKQAIVLQQKRLGRELTAEEIAEIQPKSAVGEFFASLFGILFFVTVLR
                     SFLFEPFQIPSGSMEPTLRVGDFLVVNKFSYGIKDPIWQNTLIETGKPERGDVIVFKA
                     PAQPHVDYIKRVVAVGGDKIKYDFATQQLTVTKANGETKVFEYSEGKPNPEFFYHGEM
                     QVERTEKGNVTHQILNHPMAFNYAPYFYQQEGQAEGEWVVPQGYYFVMGDNRDNSEDS
                     RFWGFVPERNIVGKATFIWLSLDKKANEFPTGLRFSRMFTSIN"
     gene            5165..5839
                     /gene="rnc"
                     /locus_tag="PXB09_002246"
     CDS             5165..5839
                     /gene="rnc"
                     /locus_tag="PXB09_002246"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDL5234317.1"
                     /translation="MQLERLQKKLGYQFHNLDYLIQALTHRSAATKNNERLEFLGDSI
                     LNFTIGKVLYDKFPKANEGELSRMRATLVREQTLAIIARKFDLGDYLKLGPGELKSGG
                     FRRESILSDCVEAIIAAIYLDQDMAKAMEKVEDWYSDLLKDISPGDSQKDPKTRLQEF
                     LQGRKLPLPEYDVLDIKGEAHNQTFRVTCKVINVEEVFIGIGTSRRKAEQNAAEKALA
                     VVKTKK"
     gene            5942..6859
                     /gene="era"
                     /locus_tag="PXB09_002247"
     CDS             5942..6859
                     /gene="era"
                     /locus_tag="PXB09_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDL5234318.1"
                     /translation="MTEQIQTPAKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRK
                     AQTTRHRIVGIHTEDQYQAIYVDTPGLHIEEKRAINRLMNRAASSAIGDVDLIIFVVE
                     GTKWTEDDEMVLNKLRSAKAPVLLAINKIDNIKEKEELLPHITELSQKFDFAEILPIS
                     AQRGKNVHILQKFVRQSLRQGEHHFPEEYVTDRSQRFMASEIIREKLMRFTGEELPYS
                     VTVEIEQFKMNERGVYEINGLILVERDGQKKMVIGAGGQKIKTIGIEARKDMERLFDN
                     QVHLELWVKVKAGWADDERALRSLGYMDE"
BASE COUNT         2132 a         1267 c         1473 g         2061 t
ORIGIN      
        1 tcccagtcta atgattctat tactgtagaa aatttttgat atgcttcttg tttatttttt
       61 cctgttaaaa aactagtatt aaaattattt tccaattctg ttaactgatt tcttctatta
      121 actaattctt tccgcattga tataacacta ttggctaata ttgcttgttg tgcttgtttt
      181 tcacgtacac gctctaaaat agtgtcatat tgagcaatct gactctttaa agcatcttgt
      241 aattgttgat taacagagcc ttgtttttct tgttcagcaa tttgagtacg taactcttca
      301 atttgattaa ctaaatcacg gaagttttct aactccacat tgaattcctg gggggagata
      361 ttaccaccgg ttgcaatggc attcttgccg attgcttgag aacctgtgcc taacgcaaaa
      421 ctaccttcac ctacagcaag gttattggtg ccagtggtgt tgcctaaagg aagtggattg
      481 gcataagaga cttggctaag ccctatcaga gcgctaagca aggtaacagt agggagctct
      541 tttgtgtgtt ttttatacag atgggtgaaa ctaaagtttg gcatatcaaa atttcctcat
      601 taaaactttt acttttcatt cttaaaaaaa tgctccgtgt cataatattt aatttgatta
      661 aatgaaatag gaaaagatta aatttgtgaa aatattttga gtttctgtgg ttttactgtg
      721 gataaatatc cacagtatta attattagtg agttgtattg taaatttagg aaggtggtta
      781 tttatcagcc tctttataga ctgccaaggc agctgcaacc gcatcgcctg aaggcacttt
      841 tactttatgg cttaaaagta cggcttctaa cgcacctaag gttaaaagta cgttacgttt
      901 ttggcttgag aaacccatat taccgatacg gattactttt ccatctaagg ggccgaatga
      961 ggtggctaat tcaataccga agtggtttaa aatatcacta cgcaatgctg ggccactcat
     1021 accttctgga atgtggaatg ccgttacaac gggggcttta tgtttgcgat cgccaaaaat
     1081 tttcaaaccc attgcttcta aacctgcaca taatgctttg tcgtttaaaa tatggcgagc
     1141 aaaacgagct tctaagcctt cttgtaaaat aatgcgtaac gcttcgtgta caccatattg
     1201 tgcagaagtg gtttctgtgt ggtgatttaa acggcgtggg ctccagtaat cttgtagctg
     1261 tgccaagtct aagtagttac ttggaattgg cggtaatgtg ccatctacat cagactctgc
     1321 acgaatgcct ttttccacac gtttacgttt tgcaataatc tcttcaatcc gtttgttata
     1381 agtgattaaa gctgtgcctg atggggcgga aatacatttt tgtgtaccgc cgatacaagc
     1441 atcaatgccc cattcatcca cacgaatatc tacaccgcct aaggttgcaa cggtatctac
     1501 aattaacatt gcatcatatt gtttacagat tttgccgatc tcttctaacg gttgcatcat
     1561 agaggttgag gtttcgccgt gaataatagc aactgcttta tagccgcctt ttttcaactc
     1621 tgcttcaatt tcttctggtt caaatacggt tccccactct ctttcgataa tggtaatatc
     1681 tgcaccgcta cgagctaaaa tttcatttaa taaataacca aaacgaccaa atgcaggaat
     1741 taacacttta tcgcctgggc aaatcgctgc ggttagaaca gtttctaagc caccacgaga
     1801 ggtggagttg actacataag tttgctcatt tttggtttgg aataaacggc gttccatttc
     1861 cattgtttca ttcattaatg aggtaaactc agggtcaaat tgccctaaaa tgggtgcaga
     1921 cattgcacgc aaaacacgtg ggtcagcatc tgttgggcca gggcacatta ataaacgagg
     1981 ggagggatta atttctctga attgcataat tatttcctat aattgaatga attaaaaaaa
     2041 cttatggatt ctataataaa aatttgtgat tgctcaatgt tttttatatt ttagagaaat
     2101 tatttgcaat tagggtgagt gcaagcggtc atttttctca agaaatttgc acatttttag
     2161 gaaaaaataa ccgcttattg ctatttgttt tctttgcaaa accttgtatt tcaagtacaa
     2221 ttccccgatt aatttttgat aaacaaataa caaaacagga cattaactgc ccgatgaaaa
     2281 tgcaaaatat tcgtaacttt tcgattatcg ctcatatcga tcacggcaaa tcgactttat
     2341 cagaccgctt aattcaaact tgtggtggct tatcagatcg tgaaatggag gctcaagtat
     2401 tagattcaat ggatcttgag cgtgagcgtg gaattactat taaagcacaa agtgtaacct
     2461 taaactataa agcgaaagat ggcgaaattt atcagctcaa ctttattgat acgccagggc
     2521 acgtggattt ctcatatgaa gtttctcgct cgcttgctgc ttgtgaaggt gctttattag
     2581 tggttgatgc agggcagggg gtggaagcac agacgttggc gaattgttat accgcaattg
     2641 agatagattt agaggttgtg ccaattttaa ataaaatcga tttaccagca gccgagcctg
     2701 agcgtgtggc agaagagatt gaagatattg tcggcattga tgccattgat gcagtacgct
     2761 gttcagctaa aacaggttta ggcattgaag atgttttaga agaaatcgtg aagaaaatgc
     2821 ctgcaccaga aggcgatgcg gaagcaccat tacaagcgtt aattatcgac tcttggttcg
     2881 ataactattt aggcgttgtg tctttagtgc gtgtgaaaaa tggcgtgctg aaaaaaggcg
     2941 ataaaattaa agtgatgagt acagggcagt cttacaatgt agatcgcctt ggtattttca
     3001 cgccaaaaca agtggatact accgagctaa aaacaggtga agtaggttgg gtagtttgtg
     3061 cgattaaaga tattttaggg gcaccagtgg gcgatacatt aacccaccac cacaacccag
     3121 caactgaagt attaccgggc tttaagaaag taaaaccaca ggtttatgca gggttatttc
     3181 cgattagttc agacgactac gaagccttcc gtgatgcttt aggcaaatta agcctaaatg
     3241 atgcgtcatt gttctatgag ccagaaactt caagtgcgtt gggctttggc ttccggtgtg
     3301 gcttcttagg cttgttgcat atggagatca ttcaagagcg tttagagcgt gaatacgatc
     3361 ttgatttgat tactaccgct ccgaccgtag tttacgaagt ggtgcaaacc agtggcgaaa
     3421 cgatctatgt ggatagccca tcgaaactcc cagcaatcaa caatattgca gaaattcgtg
     3481 agccgattgc agaatgtaat atgcttgtgc cacaagaatt cctaggcaac gtgattaccc
     3541 tttgtgtgga aaaacgtggc gtacagacca atatggtcta tcacggtaac caaatcgcct
     3601 taacttacga aatcccaatg ggcgaagtag tgttagactt cttcgaccgc ttaaaatcaa
     3661 cctctcgtgg ttatgcttca ctcgattacg gttttaaacg tttccaaacg gctgatatgg
     3721 tgcgtgtgga tattatgatt aacggcgagc gtgttgatgc gttggcgatt atcgttcacc
     3781 gtgcaaatgc ggcgtatcgt ggacgtgaat tagtggaaaa aatgcgtgaa cttattccac
     3841 gccaacaatt tgacatcgct attcaagcgg caattggtaa ccacgtcatt gctcgctcaa
     3901 cggtaaaaca gttgcgtaaa aacgtattag caaaatgtta cggtggtgat gtaagtcgta
     3961 agaagaaact gctacaaaaa caaaaagagg gtaaaaaacg aatgaaatct ctcggtaacg
     4021 tagaagtgcc acaagaagca tttttggcaa ttcttcatgt gggtaaggat taattgtcaa
     4081 tattcgtgta aaatacgacc gcttgcaagc ggtcatattt tgagaaaact ttgcaatttt
     4141 gaataaaaag gagcattcag tggcacaatt tatgccaatt atttttctag gtattattta
     4201 tggtatttgg caatggcttg attcaatgca actgccaaat actatttcca ttattttagt
     4261 tgccttggtt attatttgtg gtggattttg ggcgttttac aaattcagtg ctgacccaag
     4321 acgtaaacag gcgattgttc tacaacaaaa acgtttaggc agagaattaa ccgctgaaga
     4381 aatagcggaa attcaaccta aatccgcagt aggcgaattt tttgcctcac ttttcggcat
     4441 tttattcttt gttacagtac ttcgctcgtt cttatttgaa ccgtttcaaa ttccaagtgg
     4501 ttcaatggag ccaaccttgc gtgtaggcga ttttttagtc gtaaataaat tcagctacgg
     4561 cattaaagat cctatctggc aaaacacctt gattgaaacg ggcaaaccag aacgaggcga
     4621 tgtgattgta ttcaaagcac cggcacaacc acacgttgat tatattaagc gtgtggtggc
     4681 agtaggtggt gataaaatta aatatgattt tgcaactcag caattaacgg ttactaaagc
     4741 caatggcgaa acaaaggtat ttgaatacag cgaaggcaag ccaaatcctg agtttttcta
     4801 tcacggtgaa atgcaggtag aacgcactga aaaaggtaat gtaactcatc aaattttaaa
     4861 tcacccaatg gcatttaact atgcacctta tttctaccaa caagaagggc aagcagaagg
     4921 tgaatgggtt gtgccacaag gatactattt tgtgatgggt gataaccgtg ataacagtga
     4981 agacagtcgt ttctggggct ttgtgcctga gagaaacatc gttggtaaag ccacttttat
     5041 ttggttaagt ttagataaaa aagcaaatga attcccaacg gggcttcgtt tttctagaat
     5101 gtttacctca atcaattaat cttaacaggg gcgtatgaga tacgcccctt tattcacata
     5161 aactatgcaa ctagaacgat tacagaaaaa attaggttat caatttcata accttgatta
     5221 cctcattcag gccttaacac accgcagtgc ggcaaccaaa aacaatgagc gtcttgaatt
     5281 tctaggcgat tcaattttaa attttactat tggtaaagta ttatacgaca aatttccaaa
     5341 agcgaatgaa ggtgagctta gccgtatgag agcaactctt gtgcgtgagc aaactctagc
     5401 gattattgct cgcaaatttg atttaggcga ctacctaaaa ttaggtccag gagagctaaa
     5461 aagtggtggt tttcgccgag aatcgatttt atcggactgt gttgaagcga ttattgcggc
     5521 catttatctc gatcaagata tggcaaaagc aatggaaaag gtggaagatt ggtattcaga
     5581 tttgcttaaa gatatcagtc caggcgattc acaaaaagat ccaaaaaccc gcctgcaaga
     5641 gtttttacaa ggtagaaaat tgccattgcc tgaatatgat gtattagata ttaaaggcga
     5701 agctcataac caaactttcc gtgtaacctg taaagtgatt aacgtcgagg aagtgtttat
     5761 cggcattggc accagccgcc gaaaagccga acaaaatgcc gcagaaaaag cgttagcggt
     5821 ggttaaaacg aaaaagtaag atagcgcaag cgtcctcgct tgtgctaaag atttaattaa
     5881 atggtacaag cgtggacgct tgcaccatca aattcattcc acagaatgaa aggaaaacaa
     5941 aatgacagaa caaattcaaa ctcctgcaaa aacctattgt ggttttattg cgattgttgg
     6001 tcgcccaaat gtagggaaat caacattatt aaataagatt ttaggacaaa aaatttccat
     6061 tacctcacgc aaagctcaaa cgactcgcca tcgtattgtt ggtattcaca ctgaagatca
     6121 ataccaagcg atttatgtag ataccccagg cttacacata gaagaaaaac gtgcgattaa
     6181 tcgtttaatg aaccgtgcag caagttctgc tattggcgat gtagatctca tcatctttgt
     6241 tgtggaaggc acaaaatgga cagaagatga tgaaatggtg ttaaacaaat tgcgttcggc
     6301 aaaagcccct gttttattgg caatcaataa aattgataac atcaaggaaa aagaagaact
     6361 tctgccgcat attaccgagc tttcacaaaa atttgatttt gctgaaattc tgccaatttc
     6421 ggcacaacgg ggtaaaaatg tgcatatttt acagaaattt gtccgtcaat cactgcgtca
     6481 aggtgagcac cactttcctg aagagtatgt gacagaccgc tctcaacgct ttatggcatc
     6541 agaaattatt cgtgaaaaac taatgcgttt tacaggtgaa gagttacctt attcggtaac
     6601 ggtagaaatc gaacaattta aaatgaatga gcgtggggtg tatgaaatca atggcttgat
     6661 tttagtagaa cgagatggtc agaaaaaaat ggttattggt gcgggggggc aaaaaatcaa
     6721 aaccatcggc attgaagctc gaaaagatat ggaacgccta tttgacaacc aagtgcacct
     6781 tgagctttgg gtgaaagtaa aagctggttg ggcggatgat gaaagagcat tgagaagttt
     6841 agggtatatg gacgagtagt tggctcccgt tatagcatta atatcgtaat caaatctccc
     6901 ctaacccctc ttttctaaag agggggacta gtt
//
LOCUS       DANLTI010000131         6914 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.132, whole genome shotgun sequence.
ACCESSION   DANLTI010000131 DANLTI010000000
VERSION     DANLTI010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6914
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.132"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            63..494
                     /locus_tag="PXB09_002248"
     CDS             63..494
                     /locus_tag="PXB09_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5234319.1"
                     /translation="MSNQIALLLMSHGSFARAALASAELIVGQQENVAAIGVVAVDNV
                     ADIKRQMEQTIAELNTDKGLIILTDIVGGTPMNLASSQLTHPNVFACSGLNLPLLLEV
                     LMSRDGNLQEIRENLPLAYQNGFSLRTQQDFVSQEDDDDLL"
     gene            481..948
                     /locus_tag="PXB09_002249"
     CDS             481..948
                     /locus_tag="PXB09_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5234320.1"
                     /translation="MICFSRIDDRLIHGQVVTTWVNLHRIEQIIVLNDAVAADPTQKQ
                     ILTMAAPQGIKVVAFGIEKFGEVLQKTQITRRTMLLFTNSIDVLRTVELGVSIDKLNV
                     GGMRYQARREQLSKAVSVTPEERQAFKTLLEKGVEVTVQMVPNDEKLNLQEII"
     gene            951..1718
                     /locus_tag="PXB09_002250"
     CDS             951..1718
                     /locus_tag="PXB09_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5234321.1"
                     /translation="MLTALLVACWAGICALDDIGTQMIRRPLLIAPVVGLIMGDLETA
                     LIIGATLEVMWMGIGNVGAYSAPDMISGTAIGTALGIAAGEASTAVALAVPTSLLAQQ
                     LLILYRSGVCALNPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADII
                     AQAVSALPAKVITGLNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSV
                     LPITLIALPLALIYDLAVSKKAEAAPTKTADEEDYDL"
     gene            1715..2521
                     /locus_tag="PXB09_002251"
     CDS             1715..2521
                     /locus_tag="PXB09_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDL5234322.1"
                     /translation="MSNKITKQDLNKVFWRMQVLNVTNNFQSMQAIGFLSSFIPVLKR
                     LYKDRPQEERAEAMKRHLKFFNSHVNSDALILGIAAAVEETTKEDEKETVTAIKTGLM
                     GPLAGLGDSLLKFTWLPICGSIGAALALSGNVLGPILMFLLYNSVNIATKYYGIHLGY
                     SKGVDLIHGAGNNILQRLGNMANVVGLMVIGALIASVVKVKVVSQIAAGDNVIKFQEM
                     LDKVMPGLLSLLLTVVIYWILKKTNGKYAATMILATMGICIGLVYAGILG"
     gene            2521..3558
                     /locus_tag="PXB09_002252"
     CDS             2521..3558
                     /locus_tag="PXB09_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDL5234323.1"
                     /translation="MDSVYDIIRLEQGRYLFRQQPAQSVQIFFLDNPDSKDSKWLAET
                     DLAEFELKLSACEARPFFLIQSANGEQIVAERTLPVAGMNNFRDMGGYVAHQGKRVKW
                     GKLYRSDHLHNLRDEGVAYLDKLGIQTVIDYRSPNEVAKYPNPPINGREQTFRLDPNA
                     HTAELAAQFSADKHDEDRNLVNKIIAQKAEGNLINRYDIVMAQYRNFVEKAECQTAFA
                     EMLRLATDPENAPLVQHCRGGKDRTGFGAMLLLGILGVSKADIIADYMLTHYNRLARN
                     EEKMAIYRTFTQDQDVLDYLLSLIDTQPEFIEQSLNTIETQYGTIEQYAQRVLGITAK
                     EIEALRANYLA"
     gene            3648..4868
                     /gene="agp"
                     /locus_tag="PXB09_002253"
                     /pseudo
     CDS             3648..4868
                     /gene="agp"
                     /locus_tag="PXB09_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628146.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
     gene            5176..>6914
                     /locus_tag="PXB09_002254"
     CDS             5176..>6914
                     /locus_tag="PXB09_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDL5234324.1"
                     /translation="MSQDIQADLKKILALLSRNRRFQSLFLLLLRSEQFINSDALSTE
                     LQLSVRTVKKEIKLLKEKLEPYGIQIFSRPFYGYKLLIQFEELHTQLKQYFQISQPMT
                     VNNKFESRVNAILRRLLVSQRALKVEDFQSELYLSFTSALTKEFSQVKALLGKYGLIL
                     EAKPYHGMNIVGESYRKIMLTVRLYKYFTQLEHPFGIKEFEQCFACPMTEKIRERLAK
                     TIIHFNLVFSDIYAERFIIYLRYFYNQQPELLLPKLNFNYQQTNEYQFVIKLLEQLRE
                     QDSRFEFNPEVIRFLTYIAIASTDLYRFKDCNSDNYPLLLDKAWEIHRFIFTQFSAYL
                     NLSEIHDDTCRKDLLKMLIPIAMKMMLSISDDVDLGLFNQTELHRNPILAHTVEKLVD
                     DIEKNYGYSLSIREQYFIFDIFSGMVNRIELERKPLRLAIIALNGRLSTQQLKRNIKR
                     YFSDYILKIETKVLYELAIMEDKPYDYYLCNEYGKNMAIPYKPIYFADSSLNENEYAT
                     SLNEVFYHAYQYDEVLPSIKSIEIEAQYRLNEFHLEQEYLNYEQIILENKQDKIKLFY
                     QLNASVEKFEIYY"
BASE COUNT         2155 a         1247 c         1450 g         2062 t
ORIGIN      
        1 tcccttgttt atctgtataa cattttattt aatagaatga cttataaatc aaggagtgac
       61 ttatgtctaa tcaaattgcg ttattgttga tgagccacgg cagttttgcg agggcggcgt
      121 tggcgagtgc cgagctgatt gtcgggcagc aggaaaatgt ggcagctatc ggcgtagtag
      181 cagtggataa tgtagcggac attaaacggc agatggagca aaccattgct gagttaaaca
      241 ccgacaaagg cttgattatt ctcaccgata ttgttggtgg tacgccgatg aatcttgcct
      301 cttctcaatt aacccaccct aatgtttttg cctgttcggg tttgaattta cctttattgc
      361 tagaagtgct gatgagccgt gacggcaatt tgcaagaaat tcgggaaaat ctaccgcttg
      421 cataccaaaa cggatttagc ctacgcacac aacaagattt tgtttcacag gaggacgatg
      481 atgatctgct ttagccgtat tgatgaccgt ttaattcacg gtcaagtagt caccacttgg
      541 gttaatttac accgtattga acaaattatt gtgttaaatg atgcggtggc agcggatcca
      601 acccaaaaac agattttaac gatggcagca ccgcagggaa ttaaagtggt cgcgtttggc
      661 attgaaaaat ttggtgaagt gttgcagaag acacaaatta cccgccgtac tatgttgttg
      721 tttaccaata gcattgatgt gttacgcact gtagaactag gtgtatcgat tgacaaattg
      781 aatgtcggcg gaatgcgtta tcaagctagg cgtgagcagt taagtaaagc ggtttcagtt
      841 acgccagaag agcgtcaagc atttaaaacc ttattggaaa agggtgttga agtaacggta
      901 cagatggtac cgaatgatga aaaacttaac ttacaggaga ttatctagct atgctgactg
      961 cactacttgt tgcctgctgg gcaggtattt gtgccttaga tgatattggc acacagatga
     1021 tccgccgtcc gttgttaatc gcaccggtgg tcggattgat tatgggggat ttggaaacgg
     1081 cgttgattat tggtgctacg cttgaagtga tgtggatggg gatcggcaat gttggtgcat
     1141 attctgcacc ggatatgatt tccggaaccg ctattggcac cgcacttggt attgctgctg
     1201 gtgaagcttc tactgcggtt gcactcgcag taccgacctc actcttggca cagcagttac
     1261 tcattcttta ccgctccggc gtatgtgcat tgaacccaat tgctgaacgc tgggcggcaa
     1321 gcggtgattt tgacaagatt ttccgcattc actatatccc aatgttaatt gccttttcta
     1381 ttcgtgctat tccaacgttc ttagccgtct attacggggc ggacattatt gcccaagcgg
     1441 tctctgctct gccggcaaaa gtgattaccg gattaaatgt tgcaggcaaa attattcctg
     1501 ccatcggtat cggtttgctg atgttaatga tgattaagaa agccgaactt tggacgttct
     1561 taattgctgg ctttacgttg gcggtttatc tcaaattatc agtattgccg attaccttaa
     1621 ttgcactacc gcttgcgttg atttacgact tagcagtaag caaaaaagct gaagctgcac
     1681 caaccaaaac cgcagatgaa gaggattatg acctatgagc aataaaatta ccaaacaaga
     1741 tttaaacaaa gtgttttggc ggatgcaggt gctgaacgtc acaaacaact tccaatcgat
     1801 gcaggcgatt ggatttttaa gtagctttat tccggtatta aaacgacttt ataaagatcg
     1861 tccacaggaa gaacgagcgg aagcaatgaa acgccactta aaatttttta acagccacgt
     1921 taattctgat gcattgattt taggaattgc cgctgcggta gaagagacta ccaaagagga
     1981 tgaaaaagag acagtaaccg cgattaaaac cggtttaatg gggccgttag cagggctggg
     2041 agacagcttg ttgaaattca cctggttacc gatttgcggt agtatcgggg cggcattggc
     2101 actaagtggc aatgtgttag gcccgatttt aatgttcttg ttgtataaca gtgtaaacat
     2161 tgcgacgaag tattacggta tccatctagg ttacagcaaa ggggttgatt taattcacgg
     2221 tgcgggtaat aacattttgc aacgactcgg caatatggca aatgtggttg gtttaatggt
     2281 gattggcgca ttaattgcct ccgttgtgaa agtcaaagta gtttcacaaa ttgccgctgg
     2341 tgataatgtg attaaattcc aagagatgtt agataaagtg atgccgggac tactcagctt
     2401 acttttaact gtcgtgatct actggatttt gaagaaaact aacggcaaat atgctgcaac
     2461 gatgatcctt gctacgatgg ggatctgtat cggcttagtc tatgcaggaa tactcggcta
     2521 atggacagtg tgtatgacat tattcggttg gaacagggca gatacctgtt ccgccaacag
     2581 ccggctcaat cggtacagat tttctttctg gacaaccctg acagtaagga tagcaaatgg
     2641 ctggcggaga ctgatttggc agagtttgag ctgaaattga gcgcttgtga agcccgtccg
     2701 ttcttcctca ttcaatcagc aaacggagaa cagattgttg ctgaacgcac cttacctgtt
     2761 gccggaatga ataattttcg ggatatgggg ggctatgtcg ctcatcaggg caagcgagtg
     2821 aaatggggca agttataccg ctccgatcat ctgcataatt taagagacga aggcgtggct
     2881 tatcttgata aattgggaat tcagactgtt attgactatc gcagcccgaa tgaagtcgcc
     2941 aaatacccaa atcccccaat taatggcaga gagcaaactt ttcggcttga tccgaatgca
     3001 catactgccg agcttgctgc ccaatttagt gcagacaagc acgatgaaga tcgtaatttg
     3061 gtcaataaaa tcattgctca aaaagctgaa ggtaatctta tcaatcgcta cgacattgta
     3121 atggcacaat atcgtaattt tgtcgaaaaa gcagaatgcc aaaccgcctt tgctgaaatg
     3181 ttaaggttgg cgacagaccc tgaaaatgca ccattggttc aacactgccg tggagggaaa
     3241 gatcgcactg gtttcggtgc aatgttactg cttggtattt taggcgtgag taaagctgat
     3301 attattgctg attatatgct tactcattat aaccgccttg ctcgtaacga agagaaaatg
     3361 gcgatttacc gtaccttcac tcaagatcaa gatgtgttgg actacctatt gtctttaatc
     3421 gatactcaac ccgaatttat cgaacaatcg cttaatacta ttgaaaccca atatggtact
     3481 attgagcaat atgcccaaag ggtattaggt attactgcga aggaaattga agcattacgg
     3541 gcaaattatt tggcgtagaa cggtagggtg taatattgaa cacactacaa atggagaaat
     3601 ttcatatgcg ttattttgca aaacattggt ataaaactac cgcttgtctg acaacaattt
     3661 tcacagcatt tcctcttttt gctcaaccaa ttgaaaatat accaacttcc cactacgaat
     3721 tagaaaaaat cattatattt agccgacacg ggttacgttc ccctcttaca gaaaaaggca
     3781 gtgatttaga aaaatcaacc ccttataaat gggcaaattg gagtgtaccg accggtcatt
     3841 taacccataa agggacgctg ttggaaacct attttgggca gtatcttggt caatggctca
     3901 cacataatgg gttattggac aaggcaagct gtgaaagtgg gaagcagatt gaggtttatg
     3961 ctaatagcct gcaacgtaca attggcactg cacaagcttt ggttgccggt gggttttcag
     4021 gttgtaatgt acaagttaaa caccaccagc agattggaaa gatggatccg gtgtttaatc
     4081 caattattcg ctccgatgac cagacatttg tgcaaacagc attaagcaaa attgacctca
     4141 ataaaaccca tcagtattta gcgccatcct atcatttatt aagcgaaata atcgattatg
     4201 ctcattcaga aaaatgtttg caggaaaaac agtgtgaatt ttttaatgat gttggtaaat
     4261 taaggattaa aaaggataaa taaccaggtg tttccggtac gatgcgatta agtaaaaata
     4321 ttgtcgatgc cttattgctg caatattatg aaggttttcc tttaaaagag attgcaaata
     4381 accagcttga tagtgatcag aaatggcaaa cactcaataa aattaaaaac gattaccaat
     4441 ttatgctacg aggagatcca tttattgcta aacatatttc attaccgcta ttaaaatata
     4501 ttcagcaaga tttaaatagt gaaaataaaa taacactttt agtcggacac gattccaata
     4561 ttatagcctt actttctgca ttaaatgtta agccttataa attagcacat caatatgaac
     4621 aaactccaat aggagggaaa gtctttattg aaatctggaa agaaaaaagt agccaagcac
     4681 aaaaagttaa actggaatat gtatatcaat ctactgacca aattcgtaaa gcgattccac
     4741 taagccttga taaaccaccg caacatcaca ttttgagttt ggattattgc caagctgacc
     4801 aatatggatt atgcgattat atggaattta aacagttact ggaaaaagtc attgctgata
     4861 cattgtgaga ttttgacaaa gtgagtgaaa aaggtagcat aaaaaagtcg ggacagttgc
     4921 cagctgctcc ctgtaagatg ttgtttacag cactagtaat gctactatcc ccaaaaagct
     4981 gctgaaaggc agcttttttg ttgtatataa aagtacacct ttctacgctt cattcttttt
     5041 ctccaattaa acctaattta ggacttctag tgataaattc ggtatcatat cttaattcac
     5101 tacatatcgt gcaagcctta aaattgaaag ggctgacgaa atcctattta attctgacac
     5161 acataaggga atattatgtc gcaagatatt caagccgatt taaaaaagat attggcacta
     5221 ttaagccgta accgtcgatt tcaatcatta tttttattac tgttaagaag tgaacaattt
     5281 attaatagtg atgcactttc tacggagtta cagctttcag tacgaacggt aaaaaaagag
     5341 attaagttat taaaagaaaa acttgaacct tacggcattc agattttttc tcgaccgttt
     5401 tatggctata aattattgat tcagtttgaa gaattacaca cgcaactaaa acagtatttc
     5461 caaatatcac agccgatgac ggtaaataat aaatttgagt ctcgggtaaa tgcgatttta
     5521 cgccgattac tggtgagcca gcgtgcattg aaagttgaag attttcagag tgagctttat
     5581 ttaagtttta ccagtgcctt aacaaaagaa tttagtcaag ttaaagcctt gttaggaaaa
     5641 tatggattga tactcgaagc gaaaccctat cacggaatga acattgtagg tgaaagttat
     5701 cgtaaaataa tgctcacagt acgattatat aaatatttta cccagcttga acatccattt
     5761 ggaattaaag aatttgaaca gtgttttgct tgtcctatga ctgaaaaaat ccgtgaaagg
     5821 ttagctaaga caattattca tttcaattta gtattttctg atatttatgc tgagcggttt
     5881 attatttact tacgctattt ttataatcaa cagcctgagt tattgttacc gaagttaaat
     5941 tttaattatc aacagacgaa tgaatatcag tttgtaatta agttactgga acagcttcgt
     6001 gaacaagaca gtcgttttga gtttaatccg gaagttattc gatttctgac ctatattgcg
     6061 atagccagta cagatctcta ccgctttaaa gattgtaatt cggataatta cccattgttg
     6121 ctagataagg cttgggaaat tcatcgtttt atttttactc agttttctgc atatttaaat
     6181 ttatcggaaa ttcacgatga cacttgccgt aaagatttgc ttaaaatgct gatccctatc
     6241 gcaatgaaaa tgatgcttag catttcagat gatgtggatt tagggctatt taaccaaaca
     6301 gaactacata gaaatccaat tttggctcat acagtagaaa aattagtgga tgacattgaa
     6361 aaaaactacg ggtatagcct atctattcga gaacagtatt ttatttttga tattttttcc
     6421 ggaatggtta atcgaattga attagaacgt aaaccgctcc gactggcgat tattgccctt
     6481 aatggcagat taagcaccca acagttaaaa cggaatatta agcggtactt ttccgactat
     6541 attttgaaaa ttgaaaccaa agtgctatat gagcttgcca taatggaaga taaaccttat
     6601 gactactatc tctgtaatga atatggaaaa aatatggcta ttccctataa gcctatttat
     6661 tttgctgaca gtagtttaaa tgaaaatgaa tatgcaacat cactcaacga agtattttat
     6721 cacgcttatc aatatgatga ggtgttgcct agcattaaat cgattgaaat tgaagcacaa
     6781 tatcgcctaa atgagtttca tcttgagcaa gaatatctta attacgaaca gattatttta
     6841 gaaaataaac aagacaagat taaactattt tatcaactca atgcctcggt ggaaaaattt
     6901 gagatctatt attt
//
LOCUS       DANLTI010000132         6908 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.133, whole genome shotgun sequence.
ACCESSION   DANLTI010000132 DANLTI010000000
VERSION     DANLTI010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6908
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.133"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..396)
                     /locus_tag="PXB09_002255"
     CDS             complement(<1..396)
                     /locus_tag="PXB09_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234325.1"
                     /translation="MITSNLERSFHGLNIAQHNYKIFLDESGGNIGKLKHTPNDKKGS
                     NFNRTISSHIGVPPVFVLGGIAQISNANLIAPDWRKLLHLQNKELKFSKIGKNFFNKL
                     GSKELRKVLEWINENNLCIHFALYDWVYFY"
     gene            complement(423..1097)
                     /gene="cas4"
                     /locus_tag="PXB09_002256"
     CDS             complement(423..1097)
                     /gene="cas4"
                     /locus_tag="PXB09_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HDL5234326.1"
                     /translation="MGDLQNSAEILPLVQPKFGDDKRSISLSALQHYAFCPRQCALIH
                     NEQVWAENYLTAQGQALHERVDSGEPEVRKGIRFERTVHVAAEKLGISGILDLVERDL
                     KTGELKPVEYKRGKPKLDPIDEIQLCAQALCLEEMTEQTINEGALWYMQTRHRLPIIF
                     STELRTKTLATIAEVRSLLDSGTTPPPEYSKRCKACSLIDLCQPKLLERDRSKGYVVG
                     VFGSLL"
     gene            complement(1097..1960)
                     /gene="cas7c"
                     /locus_tag="PXB09_002257"
     CDS             complement(1097..1960)
                     /gene="cas7c"
                     /locus_tag="PXB09_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
                     /protein_id="HDL5234327.1"
                     /translation="MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPETSKGLVTDV
                     CLKRKIRNFIEMSYENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKEEAKAR
                     EITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIIPLEVSITRMAVTN
                     EKDLEKERTMGRKYIVPYALYRVHGFISAKLAEKTGFSDEDVQKLWQALQLMFEHDRS
                     AARGEMAARKLIVFKHDSELGNQPAHKLFDSVKVERINGEKDTPAKDYDDYCISVQTE
                     GLTGVTVEELL"
     gene            complement(1970..3751)
                     /gene="cas8c"
                     /locus_tag="PXB09_002258"
     CDS             complement(1970..3751)
                     /gene="cas8c"
                     /locus_tag="PXB09_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HDL5234328.1"
                     /translation="MITALTRYYYRLAAQEDRLTGEAKVPSYGFSEEKIGWVLELDSK
                     GNLVNVISNLTEDKKPKPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGIESNPDKATAK
                     DQPINFAEKTFEAFKQYHLDLLADSNDEGLMAIRNFLQQWQPTHFAESICPREILDAN
                     VVFKLVGTSGYIHQREAAQTLWTSLLINQSDNAEKGLCLISGKLSPIQRTHPPIKGVF
                     GGQSSGGSIISFNKESFTSFGKEQGSNAPVSEQAAFAYTTALNYLLRTEKHRLTIGDA
                     STVFWAEADNTTQAEAAEGFFAALMTPPDDEQENQKIFEELQKISKGRPLAEISPELS
                     ENTRFYVLGLAPNAARISVRFWLDTTFGQLAKNLSEHWQDLALEPCPWKTPPSIWRLL
                     LQTASLGKSENISPVLAGEMARAVISGHLYPMSLLSQLVTRIRADGDINGLRVALMKA
                     VLQRKFRKGFIKEGVPMSLNKESDNQAYLLGRLFAVLERIQSQALGELNAGIADRYYG
                     SASAVPFSVFPRLLSGAKHHLSRLRKDKGGMAVNLDKDLGEIIASLPENFPRHLSIDE
                     QGRFAIGYYHQKQSYFAKKETTESIEN"
     gene            complement(3773..4450)
                     /gene="cas5c"
                     /locus_tag="PXB09_002259"
     CDS             complement(3773..4450)
                     /gene="cas5c"
                     /locus_tag="PXB09_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HDL5234329.1"
                     /translation="MPNKIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVH
                     WKPAIRWVIDKIYVLQPIQFESVRRNELGSKISASKISGAMKRKTVADLYTVIEDDRQ
                     QRAATVLKNVGYVIEAHAVLTKMAGEAETVTKHIEMFKRRAKKGQCFQQPCMGVREFA
                     ANFALIDDDEPLPECFLAENERDRDLGWMLHDIDFEHGNQPRFFRAEMKNGVIDVPPF
                     YAEEVKS"
     gene            complement(4692..6443)
                     /locus_tag="PXB09_002260"
                     /pseudo
     CDS             complement(4692..6443)
                     /locus_tag="PXB09_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250669.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
     gene            complement(6433..6861)
                     /locus_tag="PXB09_002261"
     CDS             complement(6433..6861)
                     /locus_tag="PXB09_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234330.1"
                     /translation="MAGDVPMTSCIGKVEEPLIITPGVGKYKKGYGQPFDAHREKANE
                     AIDSASSILCIGYGFNDDHLQTHLTGKIKSGVKTLLLTRGLSENARNVVKEAPNCKAL
                     IFDGDKAGTRVVSKQEETFIPNVHWWDVEFFVKEILENGK"
BASE COUNT         1934 a         1575 c         1289 g         2110 t
ORIGIN      
        1 gtagaaatac acccaatcat acaaagcaaa atgtatacat aggttatttt cattaatcca
       61 ttccaagact tttcttaatt cttttgaacc aagtttatta aaaaaattct ttcctatttt
      121 actaaacttt aattccttat tctgcaaatg aaggagtttt ctccaatcag gagcaattaa
      181 attagcatta ctaatttgag caatccctcc taatacaaat acaggaggaa ccccaatgtg
      241 ggaagaaatg gttctattaa aattactacc ttttttatca ttaggcgtat gttttaactt
      301 cccaatattt ccaccactct catcaagaaa tattttgtag ttatgctgtg ctatatttaa
      361 tccgtgaaat gatctttcta agtttgaagt tatcacaaca agtccctccc caaagtaggt
      421 aattataata aagatccaaa cactcccacc acatacccct tcgatctatc cctttccaac
      481 aactttggtt ggcagaggtc gataagcgag caggctttgc agcgtttgct gtattctgga
      541 ggaggtgtgg ttccgctatc taagagcgac cgcacttcgg caatggtggc gagggttttg
      601 gtgcgtagtt cggtggaaaa aatgatcggc aaacggtggc gagtttgcat ataccacaac
      661 gccccttcgt taatcgtctg ctctgtcatt tcttccaaac ataaggcttg ggcacagagt
      721 tggatttcat caatcggatc aagtttgggc ttgccacgtt tgtattccac tggttttagc
      781 tcgcctgttt ttaggtctcg ctcaaccaaa tccaaaatgc cgcttatgcc taatttttcg
      841 gctgcaacgt gaaccgttcg ctcaaagcga atccctttgc gaacttctgg ctcaccacta
      901 tctacccgct cgtgcaacgc ttgaccttgt gcggtgagat agttttctgc ccacacctgt
      961 tcgttgtgga tcagcgcaca ttgacgtggg cagaaggcat agtgttgcaa agcggaaagc
     1021 gaaattgacc gcttgtcatc gccaaatttt ggctgaacaa gcggtaaaat ttccgcagaa
     1081 ttttgcaaat cgcccattac agtaattctt caacggttac acccgttaag ccttcggttt
     1141 gtacgctgat acagtaatcg tcatagtctt tcgctggcgt gtctttttca ccgttgattc
     1201 gctcaacttt taccgagtca aacagtttgt gtgcaggttg gttgcctaat tcgctgtcgt
     1261 gtttaaatac gatcagttta cgagctgcca tttcgcctcg tgcggcagaa cggtcgtgtt
     1321 caaacataag ttgcaaggct tgccaaagtt tttgtacatc ttcatcagaa aagcccgttt
     1381 tttcagcgag tttagctgaa ataaagccgt gaacacgata aagtgcgtaa ggcacgatat
     1441 atttacgccc catagtccgt tctttttcaa gatctttttc gttggtcact gccattcgtg
     1501 tgatcgatac ttctagcgga ataatcggat cgatagattg agcgaacgcc aattgcactg
     1561 ggcctcgcac ctgtccgctg tttacttcgg tagtcattac cgccccaaag gtgcgaatat
     1621 cgaaaaagtt tttgcacatc caagcggtaa tttctcgggc tttagcttcc tcttttggta
     1681 gttttttcgc ttccgattca atccctaatg cttcataagc acgtttgttt tgtaaattca
     1741 gaacactttt ttctttaaca taaatttcgt aacccgcctc gttttcatag ctcatttcaa
     1801 taaaattgcg gattttgcgt tttaggcaaa catcggtgac taaaccttta ctggtttcag
     1861 gatcaaggcg tggcatattt cctgcatctg gatcaccatt tgggttaccg ttggttacat
     1921 caaagaaaaa aacaaattca tagcggtttt gaatagacat agtgtttcct tagttttcaa
     1981 tagactcagt ggtttctttt ttagcgaaat agctttgttt ttggtggtaa taaccaatcg
     2041 caaaacgccc ttgttcatcg atacttaaat ggcgagggaa attttccggc aagctggcaa
     2101 taatctcacc taaatcctta tccagattaa ccgccattcc gcccttatct tttctcaagc
     2161 gagataaatg gtgttttgca ccgcttaata agcgagggaa taccgaaaac ggcacggcag
     2221 aagccgaacc ataatagcgg tcggcaatgc cggcatttaa ttcgcctaat gcttggcttt
     2281 ggattctttc taatactgca aataacctgc cgagcaagta agcttggtta tcgctttctt
     2341 tatttaagct cataggaact ccttctttaa taaaaccttt tctaaatttt cgttgtaaga
     2401 ctgctttcat caacgctact cgcaaaccgt taatatcgcc gtctgctcgg attcgagtca
     2461 ctaactgtga aagtaaactc atcggatata aatgaccgct aataactgcg cgagccattt
     2521 cacccgccaa gactggagaa atattctcac ttttacctaa tgaagcggtt tgtaataata
     2581 gtcgccaaat ggaaggtggt gttttccatg ggcaaggctc aagagcgaga tcttgccaat
     2641 gctcgctgag gttttttgcc agttgcccaa aggtggtatc cagccaaaaa cgtaccgaaa
     2701 tgcgagctgc atttggagca agccccaaca cataaaaacg ggtgttttca gataattctg
     2761 gggaaatttc tgcaagcggt cgtcctttgc tgattttttg caattcttca aagatttttt
     2821 ggttttcttg ctcatcatct ggaggcgtca ttaaagcagc aaaaaagcct tcagcagctt
     2881 cagcttgggt ggtattgtct gcttctgccc aaaagacagt gctggcatca ccaatagtta
     2941 aacgatgttt ctcggtgcgt aacaaataat ttaaagcagt agtgtaggca aaggcggctt
     3001 gttcagaaac aggggcatta ctaccttgtt ccttgccaaa tgaagtgaag gattctttat
     3061 tgaaagagat gattgaacca ccggaacttt gcccaccaaa taccccttta ataggaggat
     3121 gagttcgttg aattggcgat aatttgcctg aaattaagca taaacctttt tcagcattat
     3181 cactttgatt tatcaacaaa cttgtccaaa gggtttgtgc agcttctcgc tgatgaatat
     3241 aaccgcttgt gccgactaat ttaaacacga cattcgcatc aagaatttct cttgggcaga
     3301 ttgattcggc aaaatgtgtg ggttgccatt gttgcaggaa atttcttatc gccattaaac
     3361 cttcatcatt ggaatctgca agcaaatcca aatggtactg tttaaatgcc tcaaaggttt
     3421 tctcggcgaa attgatgggt tgatctttgg cggtggcttt atcaggatta ctttcaatgc
     3481 ctagcacata agcggtttta tcccacagaa aattgggctt aatgccagac gtgcgttttt
     3541 cagggcgagg tacgctcatc aatttcggtt ttggtttctt atcttctgtt aaatttgaga
     3601 tcacattgac caaatttccc tttgaatcta attctagtac ccaaccgatt ttttcttcac
     3661 tgaaaccata agaaggcact ttagcttcgc ctgttaagcg atcttcttgt gctgcaaggc
     3721 ggtaataata gcgagttaag gcggtaataa tagcgagtta aggcggagag aatcatgatt
     3781 tgacctcctc tgcataaaat ggtggcacat caatcacgcc atttttcatt tccgcacgga
     3841 agaaacgagg ttgattaccg tgctcaaaat caatgtcgtg caacatccag cctaaatccc
     3901 gatctcgctc attttctgcc aaaaaacact caggtaacgg ttcatcgtca tcaatcaagg
     3961 caaaatttgc ggcaaattca cgcacgccca tacaaggctg ctggaaacat tgcccctttt
     4021 tcgcacggcg tttaaacatt tcaatatgct tggtgacggt ttccgcctcg cctgccattt
     4081 tggtcagcac tgcgtgagct tcgatcacat aaccgacatt tttcagcaca gtagcagcac
     4141 gttgttggcg gtcgtcttca atcacagtat ataaatccgc cactgtttta cgcttcattg
     4201 caccactgat tttactggca gaaattttac tgcctaactc attacggcga acagactcaa
     4261 attgaatcgg ttgtaataca taaattttat caatcaccca gcgaattgcc ggcttccaat
     4321 gcaccgcagc caaaatcccc cgtgccgcag acggcgtaat cacatcataa gacacccgtt
     4381 ctaccttcat ttcaggacgg gtaaaacaag cataatcacc ccaaatatgg agcctgattt
     4441 tgtttggcat aatagaatgc tccttttaat tatgtaacac acacctcccc gaagggaggt
     4501 gaaatttctt tagcttatat tataactgct ttggtttcaa cccacgcact cagtaaaatg
     4561 cgaaaaattt tatggcttat tatattaagc ggtcggattt acttagaaag ttgcaaagtt
     4621 atttgagtat ttaaccgctt gtatttcaaa aatagtcaga aaaataacag cattctaggt
     4681 acaatatttt tctaagaacg aacttgtctc cgcaatgcct ctactgcgtt tgacacagca
     4741 tttggtttgg gctcctggtt tgcccaatca gaccagaatt ggcgtgtagc actttctggg
     4801 gctatatgcg gtttagcaag tttgattcgt gtaggtaata gaatcgaatc gcctagcaat
     4861 aacgcttcgc ctaaatcaag taacggcaat atatcagtaa ttccaaccat agattccggc
     4921 aataaacgct ttacaacact ttgatcttga ccatttgtta atcgtaaaac caagaaatta
     4981 ttacattgac tcaaaattgt tcggcttaca tctgaaggac gttggctaac gaccaacaaa
     5041 gacacgccat attttctacc ttctttcgca atccgctcaa aggcttccaa tgcgcgtttt
     5101 tccgctgctt ccgctgaatc tcgaacaggg agatataaat gtgcttcatc gcaaataatc
     5161 gttagtggat ggcgggaatc tttatccatc caaaattgaa tgttgtataa aaggcgggca
     5221 agaactcccg taacaatcgg taaaacatcc gacgggactt ccgaaaaatc aataattttt
     5281 atcccttttt cgctctcaga agcagaaaac agttttgaca acatattttc cagccaccca
     5341 tagctgttgc actctactgg cggttggaac ataaaaccgc aacgtctgtc atctattttg
     5401 gctttcatcc ttcccataaa cctagacaac ttactatacc aaggaccttg ctttgttcct
     5461 gaacctccct ctttaggtac catctcagaa ttatctttat ctaaacgagc taacaataat
     5521 tcaatagaat acggaattgg cgaatcaaca gtaaacgttt ccaaaacatc atttctttct
     5581 tccttattca atgtttgctc ttttaatgcg cgaacatgct cagtaaaacg cgccgcctga
     5641 ttcggagcat tatcatcact gcgatctaaa attaaagcca gcatttattc ccgattgagc
     5701 agccaatagg gaataaataa actgcgttca tctgaaccat ccaaatctcc cggtccagca
     5761 atacggtatt gctgagcgat agcgttttta ccttcgcata gagtgctata ttcaccgtgc
     5821 atatcgaata caataagatt agcagctttt aaagctgctg cacgttccaa tattaatgca
     5881 actgaccagc ttttaccgga accagtacta cccaaaatag cagcgtgccg ttgaaagaat
     5941 ttatctccgt ttgctatagc tacagccgtt tcatcagcca taaaatgacc taaagtcagc
     6001 cgttcatttt cttttacgtt agcggacaaa agattcataa ataattgcag attgctgcca
     6061 ctaatatgaa agcaatctct atcaatttgc ggaaaacaat ccgctccccg cttaaaagtg
     6121 ttgctcaaac taccatcaac agctttataa gtaccgatta atactgcctt gataaagtca
     6181 tcctgacttt cacccagagg aatttcaccc tcattagata tttcttctag cagcaatttt
     6241 tcactgatag aacgcgttac ccgttcgata atgccgataa ggtactcact agccgttctg
     6301 ccttgaatcg caatcagatt acccacagca atactagtca tttgttgatg ctcttcaaca
     6361 gaaatcaata cacggctggt atctactgtt acaaccctgc ccaaacgggc attgtcttta
     6421 aaattcaatg tttcatttgc cattctctaa aatctctttt acaaaaaact caacgtccca
     6481 ccaatgaaca ttaggaataa aagtttcttc ttgcttgcta accacccttg ttccagcctt
     6541 atctccatca aaaatcagag ccttacaatt cggagcttcc ttcaccacgt ttctggcatt
     6601 ttctgaaagt cctcttgtca gaagtagtgt tttcacacca cttttaattt tgcctgtcaa
     6661 atgtgtttga aggtggtcat cattaaaacc atagccgata cataaaattg aagaagcaga
     6721 atcaatagct tcatttgctt tttctcgatg agcatcaaat ggttgtccat agcctttttt
     6781 atacttccca acaccaggcg taataattaa aggctcttcc actttaccta tacaacttgt
     6841 cattggaacg tctccagcca taaaccaatc taaactacca tgcggtttaa agattttgat
     6901 atgatctc
//
LOCUS       DANLTI010000133         6693 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.134, whole genome shotgun sequence.
ACCESSION   DANLTI010000133 DANLTI010000000
VERSION     DANLTI010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6693
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.134"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(76..381)
                     /locus_tag="PXB09_002262"
     CDS             complement(76..381)
                     /locus_tag="PXB09_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDL5234331.1"
                     /translation="MRKPAHPGQILLDGFIEPNNIKIKELADHLGFSRETLSRVLHGK
                     TPMTANLALSLEEAGISTAKLWLNLQTKYDLWELKQQRLNPVMPFHFGGNYGETAHA"
     gene            complement(390..665)
                     /locus_tag="PXB09_002263"
     CDS             complement(390..665)
                     /locus_tag="PXB09_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5234332.1"
                     /translation="MIKSFKHKGLKQYFEKGITKGIQLNHQRKIDGILDLIDSAESID
                     EFMPFYQCHELKGNRKGIYSMTVNGNWRITFEFVNGDAYILNYEDYH"
     gene            957..1187
                     /locus_tag="PXB09_002264"
     CDS             957..1187
                     /locus_tag="PXB09_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234333.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENEATQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            1569..1805
                     /locus_tag="PXB09_002265"
     CDS             1569..1805
                     /locus_tag="PXB09_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234334.1"
                     /translation="MSNQEFVKLGSVEPSTIDELQKEDIRQAILKSVSITPYYVGLEI
                     AVCQAISAINKFSDGCITEELLDTKNGDKYRKNN"
     gene            2112..2187
                     /locus_tag="PXB09_002266"
     tRNA            2112..2187
                     /locus_tag="PXB09_002266"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2145..2147,aa:Arg,seq:tct)
     gene            2374..2880
                     /locus_tag="PXB09_002267"
     CDS             2374..2880
                     /locus_tag="PXB09_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234335.1"
                     /translation="MKTKYKIIIERAKQQGLTHIELTQKHCLYLATSVGKLCYGVANN
                     AEQHIKLAAGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELNGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2884..3243
                     /locus_tag="PXB09_002268"
     CDS             2884..3243
                     /locus_tag="PXB09_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234336.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            3240..3719
                     /locus_tag="PXB09_002269"
     CDS             3240..3719
                     /locus_tag="PXB09_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234337.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKAVNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFIPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNVLAEMVKRTQEANNAKHA"
     gene            3853..4065
                     /locus_tag="PXB09_002270"
     CDS             3853..4065
                     /locus_tag="PXB09_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234338.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFILAEENIIELLENNGFETIAT
                     ILAGSDGWRNAINAYLAEQNKHRNEF"
     gene            4078..5028
                     /locus_tag="PXB09_002271"
     CDS             4078..5028
                     /locus_tag="PXB09_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234339.1"
                     /translation="MTTANQQFELILKTESRVVSTNLQTFEEQANQYLATLTTTFETD
                     DDFAKAKEEVKELESIEKKIRDAIKQTQTGEIAELVLTAEQIAERFRQERLTRDKLVK
                     SKETEIKKQIADKAIEEITDTRNKLVKVSDISLALEITMPKHGIANRIAEAQKNKRTI
                     DSLTKAVNAEKALIISEMSVEIGRLTERLEQLAAKSAYLFPDAVKLIATQDDLAPIIQ
                     QRLAEEAEREAAIKAKAEADKVQAEAKAITDKMERKQAVENPQNVAKMNIEEPAQTDG
                     PLGDFIITIRLNQTIQTNAVSIARELKAKFGDSVSLNKAK"
     gene            5069..5863
                     /gene="bet"
                     /locus_tag="PXB09_002272"
     CDS             5069..5863
                     /gene="bet"
                     /locus_tag="PXB09_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDL5234340.1"
                     /translation="MTTALQTLTNKLAERFEMGDGSGLVETLKSSAFAGATVSDAQMI
                     ALLVIANQYQLNPWTKEIYAFPGGNGGLTPIVGVDGWVRIINREPQYDGMEFHFTDDY
                     SACTCTIYRKDRSKPIVVTEFMGECKKSSPAWNSHPKRMLRHKAMIQCARLAFGFTGI
                     YDQDEAERIAENEKPPKNITPQNNVVETTAVELISEEQLSQIRQLMQVTGTEEAKILA
                     YIGVQALNQIPKSQAEAVIKKLNLTLDKQNAEKADNGESVGEEIPL"
     gene            5860..6495
                     /locus_tag="PXB09_002273"
     CDS             5860..6495
                     /locus_tag="PXB09_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDL5234341.1"
                     /translation="MTGDLIILDCEQGSEEWLNARLGIPTATGIENIVTPSGKKSSAW
                     NSYLAELVAESIEGAKDGFKSSDMARGNELEPLARMAYEFETDTEVVQVGGVYLNAEK
                     QLMVSPDGLIPNLKKGLEIKCPKMKTHIKYLLEGGVPNEYLIQVQSALWVTGYETWDF
                     VSYCPEYQKQPLYIYTAERDPVLMKAFDQYIPQFIKSLYALKGVTAPKGAF"
     gene            6508..6684
                     /locus_tag="PXB09_002274"
     CDS             6508..6684
                     /locus_tag="PXB09_002274"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234342.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAICHFRRTAEYSARATHA
                     TAAECYGGIACTST"
BASE COUNT         2326 a         1381 c         1327 g         1659 t
ORIGIN      
        1 atattccttg aataaaccgc cctcgtggcg gttttctttt cctaagaaca ataaaatcct
       61 ccgaagaggg cattattaag cgtgagcagt ttctccataa tttccaccaa aatgaaaagg
      121 cataacagga tttaaccgct gctgctttaa ctcccataaa tcatatttag tttgtaagtt
      181 tagccataac ttagccgtac taattcctgc ctcttctaaa cttaacgcta aatttgcagt
      241 cattggtgtt ttgccgtgta atactcttga taaagtttca cgagaaaacc caagatgatc
      301 tgctaattct ttaattttga tgttatttgg ttcaataaat ccatctaata aaatttgccc
      361 cggatgtgct ggtttacgca taactccccc taatgataat cttcataatt caaaatataa
      421 gcatcgccat ttacaaattc aaatgtaatc cgccagttgc cattaaccgt catagaataa
      481 atgccttttc gatttccttt taactcgtgg cattggtaaa aaggcataaa ttcatcaata
      541 ctttctgctg aatcaatcaa atctaaaata ccatcgattt tacgttgatg attaagctga
      601 ataccttttg ttattccttt ttcaaaatat tgttttaagc ctttatgctt gaagctctta
      661 atcataataa cacctagcaa acacaatgtg atacaaatat atcacgcaca ataaaaaaga
      721 caatcttttt taagtgcttt ttctcctaat tgtctttctc ttcttatgtt aagtgtttaa
      781 aaaacaagca atcaaacaac ctttctaaaa ataatttctc tttaaaatca attatttaat
      841 cacgaattga aatttgtttg gctaaaataa ttacaaattg aattgactta atgatttcaa
      901 tttgtgataa taaacccatc aaaacaaaca acgccacaga caaagaggaa accaaaatga
      961 acgcacaagc aacgctaaat aaccacaaag actacatttt atgcggacgc aaagaaaaac
     1021 gcaccagtga tttcatcaat gtgtttgagg tctttgaaaa tgaagccacg caagagtttg
     1081 tgattgaaag agcaatgttc agaaatggca agttaatcga ctggaaccaa agcgacaaaa
     1141 tgaacgccga gcaagctcaa caactttggc aagcctacat tcactaagaa tttttatcaa
     1201 agcccttcac ggagggcttg aataaaggtt ctaaacctcg ccgaaaggca ttgttcttta
     1261 aaaattaaac caaaaacaca tcacgacaag cggattactt agcaatgtaa tgacattgga
     1321 gagacagaac caatctttgc ataaagcggt aaaacgtatg cggtaaatga acttataggc
     1381 aagttgtgaa actctctaag ctactcggac tgaaagaata gtacggtagt tgtggcgaat
     1441 ttactggtga tgtgcgaact agcggaaagg ttaagcactg gcagtgaatc gggaagcaca
     1501 aacgctggtt caattccaaa gcatatttga gaaagtgtgc tttggaatat taataacagg
     1561 agaacaaaat gagtaatcag gaatttgtta aattaggcag cgttgaacct tcaacgattg
     1621 atgaattaca gaaagaagat attaggcagg caatattaaa atccgtctct ataacgccat
     1681 attatgtggg gctggaaata gcggtttgcc aagcaatatc agccatcaat aaatttagtg
     1741 atggctgtat tacagaagag cttttagata cgaaaaatgg tgataaatac cgaaaaaata
     1801 actaatcaat aacaccaaag tgatttcatt ttttcggcat tagccctaga tgttgcccaa
     1861 gtattatatt cctcgaagtt gtggcaaaca agaggacttg gcccggtggc tcacaagtat
     1921 aaaaaagagc caccatctct aacagctctc aacagagagt gagacaaata accccgtttt
     1981 agttttaatg ttttctaaag tcggcgttag gcagcgaaac gaatgtacta gagagttgtt
     2041 agagatggtt agtccatcac attccttaga ttgaagtaag ccctgccgtt ggggttaagc
     2101 aacggtactt tgaccgcata gttcagtgga tagagcagct gccttctaag cagtgggtcg
     2161 agagttcgaa tctctctgcg gtcgccatcc aaaaccgctt tacgcacatc atcgatgacg
     2221 agcctacgaa gtggaaacct accgtgtaga gcggttttga atggctaagt tgtgtaactg
     2281 ctacaactta aaaagagcgg ttgataataa acataatgac tccgtttccc cgcctcgtgc
     2341 ggggcttttt ttatccacat aaaaggattc aaaatgaaaa ctaaatacaa aattattatt
     2401 gagcgagcaa aacaacaggg tttgacccat attgagctta ctcaaaaaca ttgtctgtat
     2461 ctcgctacat cagtagggaa actgtgctac ggggtagcta ataatgcaga acaacatatt
     2521 aaacttgctg ctggagagat ttttacacta ctaacgatca ttaaccatca aatccagttc
     2581 gatgaagact tagagcttca cacgtggaaa gctagtggaa caaccccacc cgagcaaaga
     2641 gcgatacgta tgttacatca tacctcgcaa tttgcttggt ttgctccttg gttagtggac
     2701 agcaatgaaa aagaacaaaa ccaaaataca atcaggatta atttatttaa caaatgctct
     2761 gggattctga ttgaactaaa tggcattctt aaagaatacg agctaactct tgatgagtgc
     2821 ttagatgaat tcttgaaaaa taagcattgt ttgaatgaat ttagtattca caaggagtaa
     2881 aaaatgacga cgtttagtat ttataccagt gtatggcacg acagctccac gaaaggcttt
     2941 cgccacaaca ttaagcataa acgccacgat tgctggagag cggatatccg cataaagcaa
     3001 aaaatcaatg atgtgtgggt gcagatttca aggatacgca aacgcttcaa gtgccctgaa
     3061 caggcaaaat cctttgtaga acaatggaaa caaattgatt cacctgcatt tatgcaacac
     3121 caaatcaacc gccaagcatt aagagaagaa ttatcaaacc ttgagcaacg caaacagaag
     3181 caagacggaa tacttgaggt gattgagtat cgtattagcc aaatcaagga gttgctgaaa
     3241 tgaaacgcaa taaagtagaa agctatacta tccgcttatt aaaaaataat catacaaaac
     3301 gctacttcgg agaagttata ttaaacggca taaaagaaat cagcacggca gagatgatgt
     3361 ctgaaattaa cgctattaag gcagtaaata agcgcattga agctctgaat aaaaccaaag
     3421 ccgttaattt gcctaattat cctgaaatcc ggggtcatca gcctattatg tacaattaca
     3481 attttgaaca aattgaggaa gatcctgaac aggttaagcc taaaccatca aaaccaaaac
     3541 gcaagccatt cataccttat gggctaaacg gctactttgt ggatagcaac ggtaatattc
     3601 gcttacatct agacagacga gcaagtgccg aaacaattac ccttgaaact gatttcttca
     3661 acgttcttgc cgaaatggta aaacgtacac aagaggcaaa caatgctaaa catgcttaga
     3721 caatggatta aatacggctt atacgccctg ctttttatgg ttgccatcac cctcctaatg
     3781 caatgaagag cttatccctg aaagcacctg caagcctgaa acttgcgaat ttaaagtaac
     3841 ggagaaagtg tgatgatagg atacgaagac tacacagatg cttcacttca accagaagaa
     3901 gaccctagcg aagaggcttt catcttggct gaagaaaaca tcatcgagct attagaaaac
     3961 aacggctttg aaaccattgc caccatccta gccggttctg atggctggcg taacgcaatc
     4021 aacgcctacc tagccgaaca gaacaaacac agaaatgaat tttagaggaa taagaaaatg
     4081 acaactgcaa atcaacaatt tgaacttatt ttaaaaaccg aaagccgagt ggtttctacc
     4141 aacttgcaaa cttttgaaga gcaagcaaat caataccttg ccacgctcac caccaccttt
     4201 gaaaccgatg atgattttgc aaaagcaaaa gaagaagtga aggagcttga aagcattgag
     4261 aaaaaaattc gtgacgcaat taaacaaacg caaactggcg agattgcgga attggtatta
     4321 acagcagaac aaatcgctga acgtttccgc caagagcgat taacccgaga caagctcgtt
     4381 aagagcaaag aaacggaaat caaaaaacag attgccgata aagccattga agaaatcact
     4441 gataccagaa acaagctggt taaagtaagt gatatttccc ttgccttaga aatcacaatg
     4501 ccaaaacacg gcattgctaa tcgtattgcc gaggcacaga aaaataaacg cacgattgac
     4561 agcttaacca aagccgtgaa cgccgaaaaa gcgctgatta tcagcgaaat gtcggtagaa
     4621 atcgggcgct tgactgagcg attagaacag cttgctgcaa aatcagctta tctttttcct
     4681 gatgcagtga aattgatcgc aacccaagac gacctcgccc caattattca acaacgcctt
     4741 gccgaagaag ccgagcgtga ggcggcgatt aaagccaaag cagaagccga caaagtacaa
     4801 gccgaagcca aagcgattac tgataaaatg gagcgcaaac aagcggtcga aaatccgcaa
     4861 aatgtggcaa aaatgaacat cgaagaaccg gcacaaaccg atgggccatt aggcgatttt
     4921 atcattacta ttcgcttaaa ccaaacaatc caaaccaacg cagtcagtat tgctcgtgag
     4981 ctgaaagcga aatttgggga tagcgtttcg ctcaataagg ctaaatgatt tgataccgca
     5041 caaattcaac ctaaataagg atcatattat gacaactgca ttacaaacac taaccaacaa
     5101 acttgccgag cgttttgaaa tgggagatgg ctcaggatta gttgagacac ttaaatcgtc
     5161 tgctttcgca ggggcaaccg taagcgatgc tcaaatgatt gcactattgg ttattgctaa
     5221 ccaataccaa ttaaaccctt ggacaaaaga aatttatgca ttccccggtg ggaacggtgg
     5281 attaacgcct attgtcggcg ttgatggttg ggttcgcatt attaaccgtg agcctcaata
     5341 tgatggaatg gaatttcatt ttaccgatga ctattccgcc tgtacttgta ctatctaccg
     5401 taaagataga agtaaaccga ttgtggtgac ggaatttatg ggggaatgta aaaagagctc
     5461 tccagcttgg aactctcacc caaaaagaat gttacgccat aaagcaatga tccaatgtgc
     5521 aagattagcc tttggcttta cgggtattta cgaccaagac gaagcagagc gtattgcgga
     5581 aaatgaaaaa ccacctaaaa acatcacacc acaaaataac gtggtagaaa ccactgccgt
     5641 tgaactcatt tcggaagaac aactgtcgca aatccggcag ttaatgcaag taaccggtac
     5701 ggaggaggcg aaaattctcg cctatattgg cgttcaagca ctgaaccaaa tccctaaatc
     5761 gcaggcagag gcagtgatta aaaagctcaa tcttacgcta gacaagcaaa acgctgaaaa
     5821 ggcggataat ggcgaaagtg tcggtgagga aatcccacta tgacaggcga tttaatcatt
     5881 ttagattgcg aacaaggatc agaagaatgg ctcaatgcca gattgggcat tcccaccgcc
     5941 acaggcattg aaaatatcgt tacgccaagc ggtaaaaaat cgtccgcttg gaatagctat
     6001 cttgccgaac tggttgccga aagcattgag ggagcaaaag acggttttaa gtcgtctgat
     6061 atggcacgag gcaacgagct tgaaccgctt gcacgaatgg cttacgagtt tgaaaccgac
     6121 accgaagtcg tgcaagtcgg cggtgtgtac cttaacgccg aaaaacagtt aatggtaagt
     6181 cctgacggct taattcccaa tctaaaaaaa gggttggaaa tcaaatgccc gaaaatgaaa
     6241 acccacatca aatacctgct agaaggcggt gtgccgaatg aatatcttat tcaagtgcaa
     6301 tctgcccttt gggtaacagg ctacgaaacg tgggactttg tcagctactg ccccgaatac
     6361 caaaaacaac cgctttacat ctacacagcc gaacgtgatc cggtattgat gaaagccttt
     6421 gatcaatata tcccgcaatt tatcaaatcc ctttatgcat tgaagggggt aaccgccccg
     6481 aaaggggctt tttaataggt agccaatatg acaacccaaa agaaatacga actactccaa
     6541 aacgacacaa tcaaccacaa cggcagaaca ctctaccgca tcaaagccat atgccacttt
     6601 aggcggacgg ctgaatattc cgcaagagcc actcacgcca cagccgctga atgctatggt
     6661 ggaattgcct gtacatcaac ataaccacaa aca
//
LOCUS       DANLTI010000134         6516 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.135, whole genome shotgun sequence.
ACCESSION   DANLTI010000134 DANLTI010000000
VERSION     DANLTI010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6516
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.135"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(58..969)
                     /locus_tag="PXB09_002275"
     CDS             complement(58..969)
                     /locus_tag="PXB09_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HDL5234343.1"
                     /translation="MKWLMLCREPRLYSCCRIKAACEAKGIELDILDQNRMLLGLENG
                     EFKIYYQAGESYDNNRPEPVLLPNYDGILPRFGTGSTEMGCSVLRHFEAKGIPVLNHS
                     AAFALARDKWRTLQKLAKHNLPVPNTNFAGHLVSVKSQLNQFAFPLISKVLNGSQGNG
                     VMLFEGKNNAEAVLATFRQVNEPYLCQQFVGDAKGQDIRAFVIGNEVVAAMSRTSVTG
                     DFRANIHQGGTAQPIELTQMERALAIKATKTIGLDIAGVDFLRTEKGVVILEVNASPG
                     FEGIERVNDVDIASEMVSYFINKMKNA"
     gene            complement(966..1685)
                     /gene="nfsA"
                     /locus_tag="PXB09_002276"
     CDS             complement(966..1685)
                     /gene="nfsA"
                     /locus_tag="PXB09_002276"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDL5234344.1"
                     /translation="MQSKPTLETILSHRSIRKFTEQPISEEIFQILIEAGKAASSSNH
                     LQCVTVIRVTDRQIRETLKAVSGMQYVVDCAEFLVFCIDFNKHKQLVPESQLEWAEVS
                     LIGAVDTGILAQNVFLAAESLGLGAVYIGALRNDIERVSKALNLPEYCVPLVGMCLGY
                     PAQEPAIKPRLPNSLVCYNNQYQDFDWTEFAKYNENLTAYYQARIGEPQQWQAAIHKT
                     LDKPVRPHILPFFNQKGLLKK"
     gene            complement(1697..2482)
                     /gene="mtgA"
                     /locus_tag="PXB09_002277"
     CDS             complement(1697..2482)
                     /gene="mtgA"
                     /locus_tag="PXB09_002277"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDL5234345.1"
                     /translation="MEQSMAKRNKRFLSSLLKKIGLFFIPRKIKSKLGWLWFGSSRLL
                     TFGGTFFLIPILIFSVLPVPYSAYMVQKKVENLVQGKSYPIKKEWVSLNEISWQMQMA
                     VIASEDQKFESHFGIDLQAIETALKLNAKSKKVRGGSTISQQTVKNMFLWHGQSWLRK
                     GIEVPLTLLVENVWSKDRILEVYLNIAEFGNGIFGVEAAAKHFFKKSAKQLTLQESAL
                     LAASLPNPLVFRVDKPGPSMRKRQAWIMRQVSLLDGKNYLDKL"
     gene            complement(2457..2777)
                     /gene="trpR"
                     /locus_tag="PXB09_002278"
     CDS             complement(2457..2777)
                     /gene="trpR"
                     /locus_tag="PXB09_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDL5234346.1"
                     /translation="MKTLYNQRDPNEWTQFLALLEQAVAEDKLEPFFSMFLTADERGS
                     LGLRLQIVQALLKGEDSQREIQQNLNTSAATITRGSNMLKTLDQDFLQWLNGKVNGTV
                     NGKA"
     gene            complement(2857..3498)
                     /gene="lolA"
                     /locus_tag="PXB09_002279"
     CDS             complement(2857..3498)
                     /gene="lolA"
                     /locus_tag="PXB09_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDL5234347.1"
                     /translation="MKTLFKKSVFGLALFGLANVALADAQSVAELQRRLEQVSQYSAD
                     FDQTVRSSKGKQIQQGKGKFQVKRPNLFRMDTKSPQENLIVSDGKDLWFYDPFVSQVT
                     VNTVQDAVNNTPFVLLTSGDKSHWDQYDVSQSADTFVLKPKSKKSNLKQFDVRIDQSG
                     LLKGFSTIERDGQSNLYVLRNITTGGVSSDLFKFSVPKGAELDDQRGGKKSKK"
     gene            complement(3609..6467)
                     /gene="polA"
                     /locus_tag="PXB09_002280"
     CDS             complement(3609..6467)
                     /gene="polA"
                     /locus_tag="PXB09_002280"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDL5234348.1"
                     /translation="MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLN
                     MLKSLISQVNPSHIAVVFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKAL
                     GIPLISIEGVEADDVIGTLAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLL
                     DREGVIEKYGIPPELIIDFLALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANL
                     DQIATLSFRGAKNFAPKLEAEKANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELA
                     QLFEHYEFKRWLNEVNQNANPVTQTSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYE
                     TVDTEQKLSAWIEKLTAARLIAVDTETDSLDAMSANLVGISFALENGEACYIPLGHKQ
                     KAQPQQADMFGDEERSESPSSDELVKNQLNLTACLSKLKPILLNPEIKKIGQNIKYDL
                     TIFANYGIELQGVAFDTMIESYTQNSTGRHNMDDLAARYLGHKTIPFEELAGKGKNQL
                     TFDKIEIAKAAEYAAEDADVTMKLHQVLWEKLQQEPELVKLFDEIEMPLVGVLSRIER
                     NGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQTFNLASTKQLQEILFEKLGLPVLK
                     KTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKLKSTYTDKLPQLINKKTGRVHT
                     SYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAREGYKIVAADYSQIELRIMA
                     HLSNDEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRRSAKAINFGLIYGMSSFGL
                     SNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYVETLFGRRLYLPDIKSG
                     NAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKMIMQVHDELVFEVKA
                     DKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH"
BASE COUNT         1783 a         1512 c         1224 g         1997 t
ORIGIN      
        1 cattttttat gatatttaca aaaaataata caaaaacgtc cgcttgtttt actcaaatca
       61 agcattcttc atcttattga taaaataaga aaccatttca gaagctatat caacatcatt
      121 tactctctct atgccttcaa atcctgggct ggcattgact tctaaaataa ctacgccttt
      181 ctctgtccgc agaaaatcaa cgcctgcaat atcaagccct atcgttttag ttgctttaat
      241 tgctaacgca cgttccatct gagttaattc aatcggttga gccgttccac cttgatgaat
      301 attggctcta aaatcgcctg ttacgctggt tcggctcatg gcagcaacca cttcattgcc
      361 aatcacaaac gcccgaatat cttgcccttt agcgtcgccc acaaattgtt ggcatagata
      421 aggctcattt acttgcctaa aggtcgctaa cacggcctcg gcattatttt tgccttcaaa
      481 tagcattacg ccattcccct gtgaaccatt tagcactttt gaaataagtg gaaaagcaaa
      541 ttgattgagt tgtgatttca cagaaaccaa atgccctgca aaattcgtat taggaaccgg
      601 caaattgtgt ttggctaatt tttgtaatgt tcgccatttg tctcgggcta acgcaaatgc
      661 cgctgaatga tttagaacag gaataccttt cgcctcaaaa tggcgtaaca ccgaacagcc
      721 catttcggta ctgcctgtgc caaaacgggg taaaatgccg tcataattcg gcaacaatac
      781 cggctccgga cggttgttat catagctctc gccagcttga tagtagatct taaattcgcc
      841 attttctaac ccgagtagca ttctattctg gtctaaaata tccagctcaa tcccctttgc
      901 ctcacaagcg gcttttattc gacagcagct atataaacga ggctctcgac atagcattag
      961 ccacttcatt ttttcagcaa tcctttctga ttgaaaaacg gcaaaatatg cggacgaaca
     1021 ggcttatcca atgttttatg aatagctgct tgccattgtt gtggctcgcc gattctggct
     1081 tggtagtaag cggtcaaatt ttcattatat tttgcaaatt cagtccaatc aaaatcctga
     1141 tattgattgt tataacaaac caaactattc ggcaaacgag gttttattgc cggctcttgt
     1201 gccggatacc ccaaacacat acccaccagt ggaacacaat attccggcaa gttaagggct
     1261 ttagaaaccc gctcaatatc attacgcaat gctccaatat acaccgctcc cagccctagt
     1321 gattcggcgg ctaaaaatac attctgggcc aaaataccgg tatctaccgc cccaatcaac
     1381 gacacctccg cccattccaa ctgcgattca gggacaagtt gtttgtgttt attaaaatca
     1441 atgcagaaca ccaaaaattc agcacaatct actacatatt gcatacctga aacggctttt
     1501 aatgtttctc gaatctgccg atcggttaca cgaatcaccg tcacacattg cagatgattt
     1561 gaacttgaag ccgctttacc tgcctcaatt aagatttgga aaatctcttc agaaataggc
     1621 tgttcggtaa atttacgaat agaacggtga gataaaatcg tctcaagagt cggtttactt
     1681 tgcatatttt tctcgtctaa agtttatcta aataattttt gccatcaagc aaacttactt
     1741 gtcgcataat ccacgcttgg cgttttcgca tactcgggcc gggtttatct accctaaaca
     1801 ccaacgggtt aggcaaagag gctgccaata gtgcggattc ttgcaaggtt agctgtttgg
     1861 ctgatttttt gaaaaaatgc tttgcggctg cttccacccc gaaaatgccg ttaccaaatt
     1921 ccgcaatatt gaggtacacc tctaaaatcc gatccttact ccacacattt tcgactaaca
     1981 gggttaaagg cacttcaatc cctttgcgta accagctttg cccgtgccac aaaaacatat
     2041 tttttaccgt ttgttgcgaa atggttgaac ctccacgcac ttttttggat ttagcattca
     2101 gtttcaaggc agtttctatc gcttgtaagt caatgccaaa atggctttca aacttttgat
     2161 cttctgaggc aatcacagcc atttgcattt gccacgaaat ctcattcagg ctcacccatt
     2221 cttttttgat cgggtaagat ttcccctgaa ccagattctc cacctttttt tgcaccatat
     2281 acgcagaata aggcaccggt aacaccgaaa aaatcagtat cggaatcagg aaaaatgtgc
     2341 caccaaaggt taataagcga ctagaaccaa accaaagcca gcccagttta ctttttattt
     2401 tgcgaggaat aaaaaaaagc cctattttct tcaaaagaga gcttaaaaat cgcttgttac
     2461 gctttgccat tgactgttcc attaaccttg ccgttcagcc attgcagaaa atcttggtcg
     2521 agtgttttaa gcatatttga accacgagtg atggttgccg cactggtatt taaattttgt
     2581 tggatttccc gttgcgaatc ttcacctttt agcaaagctt gcacaatttg taaacgcaag
     2641 cctaatgaac ctcgctcatc ggcggtgaga aacattgaga aaaacggctc aagtttatct
     2701 tccgcaaccg cttgttcaag cagagccaaa aactgcgtcc actcgtttgg atctcgctgg
     2761 ttatagagtg ttttcatact gtcccttgaa gtaaaaacgg tgacaagcgg tcagattttt
     2821 acaaaatttt gcagaaaaac gaccgcttgc tctccattat tttttcgatt ttttaccgcc
     2881 acgttggtcg tctaactctg cccctttcgg tacgctgaat ttaaacaaat cgcttgagac
     2941 accgccggta gtaatattgc gtaacacata taagttactt tgcccgtcac gctcaatggt
     3001 actgaaacct tttaataaac cgctttggtc aatccgcaca tcaaactgtt ttaaattgct
     3061 ttttttcgat tttggcttaa gcacgaaagt atcagcactc tggctgacat catattgatc
     3121 ccagtggctt ttatcaccgc tggttaataa gacgaatggc gtattattaa ctgcatcttg
     3181 cacggtattt accgtaactt gtgaaacgaa aggatcgtaa aaccataaat ctttgccgtc
     3241 agatacaatc aaattttctt gtggtgattt ggtatccatt ctaaataagt tcgggcgttt
     3301 tacttggaat ttgcctttgc cttgctgaat ttgtttacct ttgctagaac gcacggtttg
     3361 gtcgaaatcc gcactatatt ggcttacttg ttccaaacgg cgttgtaatt ctgcaacaga
     3421 ttgagcatca gccaatgcca catttgccaa gccaaataac gctaaaccga ataccgattt
     3481 tttaaataat gttttcattt gttttccttt ttaccaacaa gaattttctt gtttgacaat
     3541 aaaatcatca aaagtttcat attaatgaac tgttacaaca atacaataaa agtcgtgaat
     3601 tgtatagttt aatgagcttc gtcccagttt tcgcctacgc caacttcggc aatcagtggc
     3661 actttgaggc taatcgcttt ttccatttcg gttttgatta attggctgta atggtcgatt
     3721 ttatcggctt tgacttcaaa caccaattca tcgtgaacct gcataatcat tttgatttca
     3781 tcattatcac gaatcgcatt atcaatacca atcatcgcca ccttaataat atcggcagcc
     3841 gtgccttgca ttggggcgtt gattgccacc cgttctgctg ctttacgcaa aatagcattg
     3901 ccggatttaa tatcaggcaa gtacaaacgg cgaccaaata gggtttcaac atagcctttt
     3961 tcaactgcaa cttcacgaat atcggtcata aattgttgaa ccgccgggta acgttggaag
     4021 tagagatcca tatatttttg agcctctgca cgcccaatcc ctaattggtt tgaaagccca
     4081 aatgacgaca ttccgtaaat cagcccgaag ttaattgctt tcgcactgcg gcgttgttcg
     4141 gaggtgactt cacctaactc caccccgaaa atttcggcag cggtagcacg gtgaatatct
     4201 ttgccctccg caaaggcgtt aatcattccc tcatcattcg ataaatgagc cataatccgt
     4261 agctcaattt gtgaatagtc ggcagcgaca attttataac cttctctcgc gacaaaagct
     4321 tggcgaatcc gtctgccctc ttcattgcgg atcggaatgt tctgcaaatt cggatcgctg
     4381 gaagaaaggc gtccggttgc ggtgactgct tgattgtaag aggtatgcac ccgccctgtt
     4441 tttttgttaa tcagttgtgg taatttatcg gtgtaggtag atttcaactt acttaaccca
     4501 cgatgctcca ttaataactt cggcactaaa tgcccttgtt gagccaactc gtctaacact
     4561 tcttcgttgg ttgagggtgc accttttgga gttttcttca acaccggcaa gcctaatttt
     4621 tcaaacaaaa tctcttgtaa ttgtttagtt gaggcaagat tgaaggtttg ccctgcttct
     4681 gcgtgtacta atgtttcaac ttcctccaaa cgtttttcaa tttcagccga ttgggtcaat
     4741 aattttttcg ggtcaatcaa cacgccattg cgttcaattc gagaaagtac gcccacaagt
     4801 ggcatttcaa tttcatcgaa taacttcacc aattcaggct cttgctgtag tttttcccac
     4861 aatacttggt ggagtttcat cgtcacatcg gcatcttctg ccgcatattc agccgctttt
     4921 gctatctcga ttttatcgaa ggtcagttga tttttcccct taccagcaag ctcttcaaac
     4981 ggaatcgttt tatgccccaa ataacgggcg gctaaatcgt ccatattatg acgaccggtg
     5041 ctgttttggg tgtaagattc aatcatcgta tcaaaagcaa caccttgtag ctcaatgccg
     5101 tagttcgcaa aaatggttaa atcatattta atattctgcc cgatcttttt aatctccggg
     5161 ttaagcaaaa tcggcttgag tttacttaaa caagcggtca aatttagctg attttttacc
     5221 aattcatcgg aagacgggct ttctgaacgc tcctcatcac cgaacatatc ggcttgttgc
     5281 ggttgggctt tttgcttatg cccaagcgga atatagcacg cctcgccatt ttccagtgca
     5341 aaggaaatac cgaccaaatt agccgacatt gcgtcaaggc tgtcggtttc ggtatccacc
     5401 gcaatcaaac gagctgcggt gagtttttcg atccaggctg ataatttctg ttcagtatca
     5461 acggtctcat atttgctacg atcgatctcg accacatttg caacattttc ctcatttctg
     5521 accgcttgtg ttacttggta attattcggt actttttcag ccgaagtttg agtgaccgga
     5581 ttggcatttt gattcacttc gttcagccag cgtttaaatt cataatgctc aaataattga
     5641 gcaagctcag cacggtcttg cggctgtgtt aaaagttgat cgtgagtaac atcaagttcc
     5701 acatcggttt tgatggtagc aagcaaatag gataaatcgg cattcgcttt ttccgcttcc
     5761 aattttgggg cgaaattttt tgccccacgg aaagaaaggg tggcaatttg atccaaatta
     5821 gcataaatct gttcaagtga accaatgcct tgcaataaag ctaatgcggt cttttccccc
     5881 acacctttta cgcccggaat gttatcggcg gaatcgccca ttaatgccag aaagtcgata
     5941 atcaactcag gcggaatgcc atatttttca atcacgcctt cacgatctaa caaagtattg
     6001 ttcatcgtgt taatcaacat aatgtgatcg ttcaccaatt gtgccatatc tttatcgccg
     6061 gtgctgatca acacatcttt gccgtcttta gcggcttgca cagcaagcgt gccgatcaca
     6121 tcatcagctt ccacaccttc aatcgaaatc agtggaatgc ctaaggcttt gataatgcga
     6181 tgcaaaggct caatttgagg gcgtaaatca tcgggcattg gtgggcggtg cgatttatat
     6241 tgcttaaaca actcatcacg gaaggttttc cctttggcat caaacaccac agcaatatgg
     6301 cttggattca cttgtgaaat caggcttttt aacatattca gcacgccata cattgcccct
     6361 gtcggttcgc ctaagcgatt agtgagcgga gggaaagcgt gaaatgctcg atataaatag
     6421 gaagaaccat ccaccaatac cagtggattt tttgcgatag ttgccataaa aatctcttta
     6481 taatcaaata aatattggcg ttattataca agaata
//
LOCUS       DANLTI010000135         6469 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.136, whole genome shotgun sequence.
ACCESSION   DANLTI010000135 DANLTI010000000
VERSION     DANLTI010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6469
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.136"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..707)
                     /locus_tag="PXB09_002281"
     CDS             complement(<1..707)
                     /locus_tag="PXB09_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5234349.1"
                     /translation="MSIYRRKANGPWWVDITTPNGKRIKRSTRTLVKREAQQYHDKLK
                     QEMWAEDKLEEKRKYIFEDALLHYVRAAEELKDKATKKRHAEYWLSKFAGRELSSLTA
                     QEIILNIPKKNANTKKPLSHSTQNKYVKSLSRVLNIAHKLGMLDAVPHIPKKKEPPIR
                     VRWITKEQAKQLIDKLSSDWMKSICKFALMTGARRTEILTMTWDKIDLVRKVAIVTND
                     VAKSGKARSLLLNQEAI"
     gene            complement(611..934)
                     /locus_tag="PXB09_002282"
     CDS             complement(611..934)
                     /locus_tag="PXB09_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234350.1"
                     /translation="MEHLTINQVAKELNCHPNTVRQHLADWGFFKMVGSEVWRINRED
                     LERAKKRAGIDPIRKRSDNDRGLSLSVEENEKCRSTDEKQTVRGGLISQPQTARELRE
                     ALARL"
     gene            complement(1015..1182)
                     /locus_tag="PXB09_002283"
     CDS             complement(1015..1182)
                     /locus_tag="PXB09_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5234351.1"
                     /translation="MQFTYGSICSGIEATSIAWHGLGKPLWFSEIEPFPCAVLAHRFP
                     NVPNGNGMAVP"
     gene            complement(1190..1564)
                     /locus_tag="PXB09_002284"
     CDS             complement(1190..1564)
                     /locus_tag="PXB09_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234352.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEECQIRCPKTYAKL
                     REILEANEENVVRIGNLSISIG"
     gene            1714..1941
                     /locus_tag="PXB09_002285"
                     /pseudo
     CDS             1714..1941
                     /locus_tag="PXB09_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
     gene            1966..2361
                     /locus_tag="PXB09_002286"
     CDS             1966..2361
                     /locus_tag="PXB09_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234353.1"
                     /translation="MKIHTQIRKEILSLLEAKLTDIEHFYNGQPNFIDIDEQQLAISV
                     YLDEINRQELTLCDEQWTAQLNITIYLKSVDEAEDELDEWAEKIREVVETYSAFEHLE
                     GISLSQYQYEQDQNQRTWHSATLIFDVEY"
     gene            2393..3034
                     /locus_tag="PXB09_002287"
     CDS             2393..3034
                     /locus_tag="PXB09_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234354.1"
                     /translation="MAKTTKVQGTKFRIGIGREAQKAITAITLATATLTIATSGYKKG
                     DAIEITGCGQLDGIYPVLSVTGDQVKLCEEVNWTGKDLPANYTKAKAALVQYSDQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPSTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            3117..3518
                     /locus_tag="PXB09_002288"
     CDS             3117..3518
                     /locus_tag="PXB09_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234355.1"
                     /translation="MTLREKLLANKPKLQSIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGALLFNPLNIDDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            3563..3793
                     /locus_tag="PXB09_002289"
     CDS             3563..3793
                     /locus_tag="PXB09_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL5234356.1"
                     /translation="MPERHFAEYQLFYQEQPFGLWREDYRAAQLAHLTAMINRDPKGK
                     APELSEFMPFFNRADEVEANEDDGVADYLAKR"
     gene            3861..4127
                     /locus_tag="PXB09_002290"
     CDS             3861..4127
                     /locus_tag="PXB09_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5234357.1"
                     /translation="MATINDAFSFRTNTEIKNTAFDVIKNYGMTPSQVFNMFLTEIAK
                     TKTIPLSLNYQPNLETKLAMQEAKSGKNEVYASLEAFHKAMLAE"
     gene            4131..4400
                     /locus_tag="PXB09_002291"
     CDS             4131..4400
                     /locus_tag="PXB09_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5234358.1"
                     /translation="MLQISPTNAYKRDFKKIAAELVGSSEYVEVMYCLINQLPLAEKY
                     RDHPLQGEWQGFRDCHIKPDLVLIYAVEDNLLRLVRLGSHAELFG"
     gene            4475..4738
                     /locus_tag="PXB09_002292"
     CDS             4475..4738
                     /locus_tag="PXB09_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234359.1"
                     /translation="MKNVLLFIVHFFLIAMLSIIPILIILGAIERDPYYTAWIFLSVF
                     LGIGALLYFATIVSKLINKGKTQTLEEKRYAEYWNNVKVNIPK"
     gene            4798..5508
                     /locus_tag="PXB09_002293"
     CDS             4798..5508
                     /locus_tag="PXB09_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDL5234360.1"
                     /translation="MSGLGKLTVTLELENAKFQSAMTKSDYEAQKFAKNFIQNMDRAR
                     NHAKEFADRSTQYLKNIEQAAKNLNKNSEFSFLSTIGGHYQSMSSGILSAAKAYTDIQ
                     NKMKLVSGSSAEAAKRLTDVFDIATKTSQSTEAVSGVYQTFAQNAQSLGLAQKDVAEL
                     TKTVSQAVAASGASSSAASNALTQFGQSLLMGKMKAQEFNSLITQTPTIIQAMAKGLG
                     MTMAEFKAAVYRAKSLLG"
     gene            5486..5776
                     /locus_tag="PXB09_002294"
                     /pseudo
     CDS             5486..5776
                     /locus_tag="PXB09_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484718.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
     gene            5766..>6469
                     /locus_tag="PXB09_002295"
     CDS             5766..>6469
                     /locus_tag="PXB09_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5234361.1"
                     /translation="MKFSKYQLLVNKICFICGKKDCPQMKKSKDYKDFLDALEKGDVD
                     KADKIYNTKFSQFSKSFGHEMEKNLEKNRIPPIYQGVPFDSFDLYQHYSYGNGEALNL
                     SSVGLSNKIRPLVNKDKAFGKSNGSIESRFISQYKNEGRTSFSNAYDFTKEASGIADP
                     LWALGTATISGELKDIQIFPGGIARGNIHYSIRDRFTDPFDTFNFTKGEWNPNGTPYI
                     IQDSWIKSVRFSIDKK"
BASE COUNT         2056 a         1276 c         1250 g         1887 t
ORIGIN      
        1 ttaattgcct cttgattcag taatagcgat cgtgccttac ctgatttagc gacatcatta
       61 gtcacgattg ctacctttct tacaagatct atcttatccc aagtcattgt caaaatttct
      121 gtccgtctgg ctccagtcat caaagcaaac ttacagatag atttcatcca gtctgaactt
      181 aatttatcta ttagctgttt tgcttgttct ttggtgatcc agcgtacacg aattggcggc
      241 tctttctttt tcggtatgtg tgggactgca tccaacatac caagtttatg agcgatattt
      301 aatactctcg ataaagattt cacatactta ttttgcgtac tatgagatag aggctttttc
      361 gtatttgcat tctttttcgg gatatttagg ataatctcct gagctgttaa agagctgagt
      421 tcacgaccgg caaatttgga taaccagtat tcagcatgtc gcttttttgt ggctttatct
      481 tttaattctt cggccgcacg aacgtaatgg agcaaagcat cttcaaagat atattttctc
      541 ttttcctcga gtttatcctc tgcccacatt tcttgcttga gtttatcgtg atactgctga
      601 gcttcacgtt ttacaagcgt gcgagtgctt ctcttaattc tcttgccgtt tggggttgtg
      661 atatcaaccc accacggacc gtttgctttt cgtctgtaga tcgacatttt tcattctcct
      721 cgaccgacag agataaccct cggtcattat cagatcgttt tcttattggg tcaataccgg
      781 ctctcttttt tgctctttcc aaatcttctc ggttgatccg ccaaacttcc gagcctacca
      841 ttttaaaaaa tccccaatcc gccaaatgtt ggcggactgt atttggatgg caatttaatt
      901 cttttgccac ttgattaata gtaagatgtt ccattcatta ctttctccaa aataaatccc
      961 tctaaacgag ggattgtact aaataatcgt taagtctttg ccttatccac tgcatcaagg
     1021 cacagccata ccgtttccat ttggcacatt ggggaaacgg tgagctaata ccgcacaggg
     1081 gaatggctca atttcagaga accacaaagg cttacctaaa ccgtgccacg ctatacttgt
     1141 agcttcgata ccgctacaaa ttgagccgta ggtgaattgc attttttacc tatcctatcg
     1201 aaatactcaa attcccaata cggacaacat tttcttcgtt ggcttctagg atttctctca
     1261 acttagcata ggttttgggg catcttattt gacattcctc ttcgttgtag agagcctcta
     1321 atgtgtgcca ttcttttgca agtgcagccc aaactttccc aagttcagcc attttttcaa
     1381 tcctatttcg caaaaaaggg actgtctcca acaacagaaa gcaacgcctg aaatccgata
     1441 catcgtgtgg gtagccttct atttttggtc ttattccgta accaaggtaa aaagccattg
     1501 ttttactgct tacccctgtc tctccattgg caagccacca agcgattttg tcttctatgt
     1561 gcatttttcc tccaaaaatt aaccgcttgc ggaacaagtt ctacaagcgg ttgtcaagtg
     1621 ttcatttgtt caatgaacag ttcattgtga ataacaaaac cgcttgaatt acaagcggtc
     1681 tattttgttg cgtaaattta ctgttagcgt tgagccataa ccgactacga ccgctggccc
     1741 gaagatattg acggcgaggg ggacggcttc tcgcttgcct ccaaacggac gaccactttt
     1801 atgtcagccg gaatgacttt agtggagagt tcgcctggta aagatattgt cgatctcaaa
     1861 catatcccga aaagtagcca cgaagcccca ccgactaccg gtattttaag cctctacaat
     1921 cgaggcgacc gcagacgctt tagcgaaaca gttgataggt aagctatgaa aatccatacc
     1981 caaatccgaa aagaaatcct ttcattatta gaggcaaaat taacggacat cgagcatttt
     2041 tataacgggc aaccgaattt cattgatatt gacgaacagc aacttgccat ctctgtttat
     2101 cttgatgaga ttaaccgtca ggagcttacc ttatgcgatg aacagtggac agctcaactt
     2161 aacatcacga tttatctaaa atcagttgat gaggcagaag atgaattaga tgagtgggcc
     2221 gaaaaaatcc gtgaagtggt tgaaacatat tctgcgtttg aacatttaga gggcatcagc
     2281 ctttctcaat atcaatacga acaagatcaa aatcaaagaa cttggcactc agccacattg
     2341 atttttgatg ttgaatacta acaagcaaat aatccttata ggagaatcta caatggcaaa
     2401 aacaacaaaa gtccaaggca caaaatttag aattggcatt ggacgtgaag cccaaaaggc
     2461 aattacggct atcactttag ctacagcaac gcttactatt gccacatcag gctataaaaa
     2521 aggcgatgca atcgaaatta ccggttgtgg tcagttagac ggcatttatc ctgtattatc
     2581 tgtaacaggc gatcaagtca aattgtgcga agaagtaaac tggacgggta aagatttacc
     2641 ggctaattac accaaagcca aagcagcttt agtacaatac tcagaccaat tctgtgcggt
     2701 aaaaaacatt gaaaaatctg atgatacgtt aagtaccgaa gatgttacaa cggtctgctc
     2761 ggaaggtaca gaaaccgaac ccggagaaat tgaatttggc tcaattaaac tgagcttttt
     2821 tcacaagcca agtacggaaa tgcaaactcg cttacgcaaa ttgttttatg acaaatccac
     2881 ctttgcgtac aaattagaat tacctgataa ccacggcaca acctatggcg aaggtttcat
     2941 tgaggcgggt aacggcttta gtggcgaagt taaaggcaaa tatgaaggct cggtatcaat
     3001 taaaccaagc aaacgtgatt atttgctagt gtaattacaa aatattgctc caaatcgacc
     3061 gcttgtaata ttgcaagcgg tcttttttat cctaaatttt acaaaaggaa tcgacaatga
     3121 cactccgtga aaaactcctc gccaacaaac caaaattaca atctatcgaa atcaacggtg
     3181 agacctacta cctgcgtgaa gccactgttg gcgatatgaa taagcagatt tttgaaaccc
     3241 gaagctggct cattcaacaa gctgaacaag aaaatgttga attaccggca gaagatgatg
     3301 aaacctttga cgaagctctc aaccgttttg gcgaaaaata ccgccttgct caatcggttg
     3361 cctaccgttt atgtgacgaa aacggtgcat tactgtttaa cccacttaac attgacgatc
     3421 tcaatgcgat tgccgaatta gacagtaaag tgattatcga ctttaaccaa gccgtgtccg
     3481 ccccaaaaga ctcagcgagc gaagaaagtt ccaaataacc ctttcgctcg cactgggtaa
     3541 aacccttgaa gaaatcgaac aaatgcctga acgccacttt gccgaatatc agctttttta
     3601 tcaagagcaa ccttttgggc tttggcgtga ggactatcgt gctgctcaac ttgcccactt
     3661 aaccgcaatg atcaaccgtg acccaaaagg caaagcccct gaactctcgg aatttatgcc
     3721 gttttttaat cgggctgatg aagtagaagc aaatgaagat gatggcgttg cggattattt
     3781 ggcgaaaagg taaatctctt gtatttcatt gtaattctgt ctataattgg tgtaatacat
     3841 agaaatacag gagagataaa atggcgacta tcaatgatgc tttcagtttt agaacaaata
     3901 ccgaaataaa aaataccgca tttgatgtaa ttaaaaacta tggaatgaca ccctctcagg
     3961 tgtttaatat gtttttaacc gagattgcaa aaacgaaaac tattccgtta agtttgaatt
     4021 atcaacccaa tcttgaaaca aaattggcaa tgcaagaagc aaaatcaggt aaaaatgaag
     4081 tttatgcctc acttgaagca tttcataaag caatgttagc ggagtaaata atgctacaaa
     4141 tttcgccgac aaacgcatat aaaagagact ttaaaaagat tgcagccgaa ttagtcggta
     4201 gttcggaata tgtggaagta atgtattgcc taataaacca attaccattg gcggaaaaat
     4261 atagagatca cccactacaa ggtgaatggc aaggctttag agattgccat attaagcctg
     4321 atttagtgtt gatttacgct gttgaagata atctgctccg ccttgttcgt ttaggatcgc
     4381 acgctgaatt atttggataa tttctgtaaa aactaaccgc ttgcgatttt gtgctgtggg
     4441 cggtatagtt ggaatattaa caaaggaggg aaaaatgaaa aatgtacttc tatttatcgt
     4501 acactttttc ttaatcgcaa tgctctcaat tatcccaata ttaattattc ttggagcaat
     4561 cgaaagagat ccttactata ctgcgtggat tttccttagc gtatttttag gcattggagc
     4621 attgttatat tttgcaacca ttgtttctaa gttaattaac aagggaaaaa cacaaacatt
     4681 agaagaaaaa cgatatgcag aatattggaa taatgtaaaa gtcaatattc ccaaatagtc
     4741 taactgataa atgaccaaaa gctcgcttta tgcgggcttt tttattggag aaaaacaatg
     4801 agtggcttag gaaaattaac cgttacctta gagcttgaaa atgcaaaatt tcagtccgca
     4861 atgacgaaat ctgattatga ggcacaaaaa tttgccaaga actttatcca aaatatggat
     4921 agagctagaa atcacgccaa agaatttgcc gatcgctcaa cccaatattt aaaaaacatt
     4981 gagcaagcgg caaagaacct caataaaaat tctgaatttt catttttatc gactattggt
     5041 ggacattatc aatcaatgtc tagtggcata ttgagtgcgg caaaagccta tactgatatt
     5101 caaaataaaa tgaaattagt aagcggtagt tcagcagagg cagctaaacg attaactgat
     5161 gtgtttgata ttgcgactaa aacaagccaa agtacagagg ctgtttcagg tgtctatcaa
     5221 acatttgctc aaaatgccca atctctcgga ctggctcaaa aagatgtagc agaattaact
     5281 aaaacggtct ctcaagccgt tgctgcaagc ggcgcaagca gttctgcagc aagtaatgcc
     5341 ctaacccaat ttggtcaatc acttttaatg ggcaaaatga aagcccaaga atttaactcg
     5401 ctcattactc aaaccccaac cattattcaa gcaatggcaa aaggtttggg aatgacaatg
     5461 gcagaattta aagcagcggt ataccgggca aaatctttac ttggataaca ttcaagggca
     5521 aggttttgag agagtggata caccccaaat cggcgatgtg attttaatac aggtcggttc
     5581 tgatgtgccg aatcacgcag cgatttatat tggtgaacaa atggtaatcc accatagccc
     5641 gaaccgatta tctaagcgtg atttatatga cggttattgg ttacgccata cccacagtat
     5701 ttggcggcat aaactggcgg atagattgga ttttgacggc atatttaatg atataggaga
     5761 acaatatgaa atttagtaaa tatcaattat tagttaataa gatctgcttt atttgtggta
     5821 aaaaagattg tccacaaatg aaaaagagta aagactacaa agactttttg gatgctttag
     5881 aaaaagggga tgttgataaa gcagataaaa tatacaatac gaagttttca cagttttcta
     5941 aatcttttgg tcatgaaatg gaaaagaatt tagagaaaaa tcgtatacct cctatttatc
     6001 agggagttcc atttgattct tttgacttat atcagcatta ttcttatggt aatggagagg
     6061 cattaaatct ttcatccgtt ggattaagta ataaaattcg tcctctagtg aataaagata
     6121 aagcatttgg taaatccaat ggaagtatag aaagccgatt tatttcgcaa tataaaaatg
     6181 aaggacgcac atctttctcc aatgcttatg attttacaaa agaagcatcg ggtattgcag
     6241 atccgttatg ggcgttagga acagctacca ttagtggaga attgaaagat atacaaattt
     6301 ttcccggtgg tattgctagg ggaaatatcc attatagtat cagggacaga ttcactgacc
     6361 catttgatac attcaatttt actaaaggag aatggaaccc aaatggaaca ccttatatta
     6421 ttcaagatag ctggataaaa tcggtacgat tttcgataga caagaagat
//
LOCUS       DANLTI010000136         6247 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.137, whole genome shotgun sequence.
ACCESSION   DANLTI010000136 DANLTI010000000
VERSION     DANLTI010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6247
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.137"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(29..427)
                     /gene="mutT"
                     /locus_tag="PXB09_002296"
     CDS             complement(29..427)
                     /gene="mutT"
                     /locus_tag="PXB09_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDL5234362.1"
                     /translation="MSKPIIQVSAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDP
                     NETPEEALKRELEEEIGIQVLSAFPYENFCFEYPTKIIEFFFYLVEEWVNEPYGREGQ
                     EGFWIAQSDLDEGAFPPANAQLIKRLKEHA"
     gene            complement(514..3240)
                     /gene="secA"
                     /locus_tag="PXB09_002297"
     CDS             complement(514..3240)
                     /gene="secA"
                     /locus_tag="PXB09_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDL5234363.1"
                     /translation="MISKLLTSIFGSSNDRTLKRLRKRVAQINKLEPTFEQLSDEALK
                     DKTAEFKQRLADGVSLDSLLPEAFATVREASKRVLGMRPFDVQLIGGMVLTGRNIAEM
                     RTGEGKTLTATLSCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLTVGVNIPG
                     LPSDAKRAAYQADITYSTNSELGFDYLRDNLAHDKNERFQRELHYALVDEVDSILIDE
                     ARTPLIISGPAEDATQIYQAVDQIIPHLIAQDKEDSEEYTGEGDFTLDLKNKQAHLTE
                     RGMVKVEDFLTQMGLMEEGESLYHPARISLLHHVSAALRAHKLFERNVDYIVKDGEIV
                     IIDEHTGRTMAGRRWSDGLHQAIEAKERVAIQGENQTVASITYQNYFRLYEKLAGMTG
                     TADTEAFEFQQIYGLNTVVIPTNRPVIRDDRTDLMFKSEAEKFAAIITEIRDCIERKQ
                     PVLVGTASVEKSELLSAELTKAGIAHNVLNAKFHAQEAEIVAEAGAPGAVTIATNMAG
                     RGTDIVLGGNWKMEVAKLENPTQEQIDAIKAAWQERYDIVMQAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFTEEGEAMESKLLT
                     KVIASAQAKVEAHNFDGRKHLLQYDDVANEQRKVIYEQRNHLLETDNIASMIESIRQD
                     VFESTINQYIPPQSIEEMWNVPGLEERLRREFGLDLPISHWLETEKDLHEETLRERIL
                     NIAIAEYNAKEEIVGAEVMRNFEKGVMLQNLDELWKEHLASMDYLRKGIHLRGYAQKD
                     PKQEYKKESFAMFTNMLDTLKLNVISILSRIQVRSKEEVEEAQRQQAEMDAASTPVTQ
                     ATDSAAGSREENSAESLSEEELANLNIGRNDPCPCGSGKKYKHCHGNKARYS"
     gene            complement(3299..3619)
                     /locus_tag="PXB09_002298"
     CDS             complement(3299..3619)
                     /locus_tag="PXB09_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2547 family protein"
                     /protein_id="HDL5234364.1"
                     /translation="MSLFLKHFHRTPFWSQLFLGMVAILALPEIQVAYANESEQETVL
                     NQSFLQYAQSANDIEQQSLFIAELIHKIVEIKPQAVHFCEFFANSYRLDRQNAYPIRA
                     GPQT"
     gene            3740..4042
                     /locus_tag="PXB09_002299"
     CDS             3740..4042
                     /locus_tag="PXB09_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDL5234365.1"
                     /translation="MKNSAPKKINDILQNSSLSRIVEKANFINDLNQKIQKRWPESYR
                     GLYRVVNLVDNQLIVSVKNATVRQGLILQQNMLLKQIQTDLPEITQLEFRVNPSVT"
     gene            4067..4441
                     /locus_tag="PXB09_002300"
     CDS             4067..4441
                     /locus_tag="PXB09_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDL5234366.1"
                     /translation="MKKIALIGFTTAMLGACSLLPQKSVSGTYAGELPCADCEKIQAQ
                     LTLNADKTYQYDTVYFKDKKEYTYRDKGTYSWEPNKPNVIRLEKASGNLAFQVSEQHV
                     ELCDPNGNTVKNSNNYKLGKVR"
     gene            complement(4617..4706)
                     /locus_tag="PXB09_002301"
     tRNA            complement(4617..4706)
                     /locus_tag="PXB09_002301"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4670..4672),aa:Ser,seq:gga)
     gene            complement(4798..5109)
                     /locus_tag="PXB09_002302"
     CDS             complement(4798..5109)
                     /locus_tag="PXB09_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5234367.1"
                     /translation="MSVEQTIIQKIKTEFQPIFFNVENESYMHSSGRGAESHFKLTLV
                     SDKFEGQRTVARHRAVYACLAEELANGVHALALHLYTQGEWEATGGLVPKSLNCLGVG
                     Q"
     gene            5201..5788
                     /locus_tag="PXB09_002303"
     CDS             5201..5788
                     /locus_tag="PXB09_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234368.1"
                     /translation="MKRSKKTLVLATTFVAALLAGCQSQSNTLTFSTPTPTAVFNTNN
                     QTAAVNVMTQDLRTSREIASYTKNGEVIRLTAVPEVAAMFQQAVQQDLNAKGFQIVQG
                     AANANVVVNIRKFFATVEQGNLRYKADAQVSVKVAVQGSKGNFSKNFNATRGYEGAFG
                     ASNDEIKKVLDQAYSDVVKAIYNDNEIANAIHQFK"
     gene            5960..6133
                     /locus_tag="PXB09_002304"
     CDS             5960..6133
                     /locus_tag="PXB09_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234369.1"
                     /translation="MNNPYHNVSQEYLDYLAKKVKQGKEDIKNGRIYSPEEVRKRVIA
                     AAFRGAENAKKVA"
BASE COUNT         1929 a         1322 c         1145 g         1851 t
ORIGIN      
        1 ttactttaga tacagttctc aatacaaatt atgcgtgttc ttttaagcgt ttaattaatt
       61 gggcatttgc cggtgggaaa gctccctcat ctaaatccga ttgtgcgatc caaaaacctt
      121 cttgcccttc tcttccgtaa ggttcattta cccactcttc caccaaataa aagaaaaatt
      181 caatgatttt tgttggatat tcaaagcaaa aattttcata cggaaaagcg cttaacactt
      241 gaataccaat ttcttcttct aattctcgtt ttagtgcttc ttcaggggtt tcattgggat
      301 cgactttccc cccgggaaat tcaagagact gagcaaaatc ttgcccttct aaacgttggg
      361 ttaagtaaat ttgcccaaat tcgttacgaa taatccctgc tgagacttga ataatcggtt
      421 ttgacatagt ttccttcact ctttctataa attcaagcgg tcatattaag cagaaaattt
      481 gcaaattcct gactgaatat gaccgcttgt taattacgaa tatctcgctt tgttaccatg
      541 gcaatgctta tattttttgc ccgaaccaca agggcaaggg tcatttcgac caatatttaa
      601 gtttgccaac tcttcttcac ttaagctctc tgcgctattt tcttctctac taccagcagc
      661 agaatcggta gcttgtgtaa ctggcgtact tgcagcgtcc atttcagctt gctggcgttg
      721 cgcttcttcc acctcttctt tgctacgcac ttgaatacgg cttaaaatgc taattacatt
      781 caattttaag gtatcaagca tattggtaaa catcgcaaaa gattcctttt tatactcttg
      841 cttcggatct ttttgtgcat aaccacgcaa gtgaatacct ttgcgtaaat aatccattga
      901 ggctagatgc tctttccaaa gctcatctaa gttttgtagc attacacctt tttcaaaatt
      961 acgcattacc tctgcgccta ctatttcttc cttcgcattg tactctgcaa tcgcaatatt
     1021 taagatacgt tcacgcaaag tctcttcgtg caagtctttt tcagtttcaa gccagtgaga
     1081 aatcggtaaa tccaacccaa attcacggcg taaacgctct tctaagcccg gcacattcca
     1141 catttcctcg atagattgag gcggaatata ttggttaatc gtgctttcaa atacatcttg
     1201 gcgaatgctt tcgatcattg aggcaatatt atctgtttct aatagatgat tgcgttgttc
     1261 gtaaattact ttacgctgtt cattggcaac atcatcatat tgtaataaat gcttacgccc
     1321 atcaaagtta tgcgcttcta ctttcgcctg tgcagaggca atcactttgg ttaacagttt
     1381 agactccatc gcttcacctt cttcggtaaa ggctttacgc atcatattta atttaccttc
     1441 attgaggtaa attctcatta gggcatcatc taaagagaga tagaaacgtg atgaccccgg
     1501 gtcaccttga cgaccagaac gacctcgcaa ctggttgtcg atacggcggg attcgtggcg
     1561 ttctgtacca ataatatgta aaccaccggc ttgcattacg atgtcataac gctcttgcca
     1621 cgcagcttta atcgcatcaa tttgttcttg tgtcgggttc tcaagcttgg ctacttccat
     1681 tttccagtta ccgccaagca caatatccgt accacgacca gccatattgg ttgcgatagt
     1741 aaccgccccc ggagctcccg cttccgctac aatttcagcc tcttgagcgt ggaatttcgc
     1801 atttaatacg ttatgagcaa taccggcttt ggttaattct gccgataata actctgattt
     1861 ttccaccgat gctgtgccaa ccaaaacagg ctgtttacgc tcgatacagt ctctaatttc
     1921 agtaataatc gccgcaaatt tctccgcttc gcttttaaac attaagtctg tacggtcatc
     1981 acggatcacc ggtctgttgg ttggaatcac caccgtattt aagccataaa tttgctggaa
     2041 ttcaaaggct tcggtgtctg ccgtaccagt cataccggct aatttttcgt acaaacggaa
     2101 atagttttgg taagtaattg aggcaacagt ttggttttcg ccctgaatag ccacacgctc
     2161 tttagcttca atcgcttggt gtaagccgtc agaccaacga cgtccagcca ttgtacgacc
     2221 ggtgtgctca tcaataatca caatttcacc gtcttttaca atgtaatcta cgttgcgttc
     2281 aaataattta tgggcacgca atgctgcact cacatggtgt aacagcgaaa tacgagcagg
     2341 gtgatataaa ctttcgccct cttccattaa ccccatttga gttaagaaat cctctacttt
     2401 caccatacca cgctcggtta aatgagcctg tttgtttttc agatctaagg taaaatcgcc
     2461 ctcaccggtg tactcttcac tgtcttcttt atcttgagca atcaaatgcg gaatgatttg
     2521 atctaccgct tgataaattt gggtcgcatc ttccgcaggc cctgaaataa ttaacggcgt
     2581 acgagcttca tcaattaaaa tagagtctac ttcatcaact aatgcgtagt gtaactcacg
     2641 ttggaaacgt tcgtttttat cgtgagctaa gttatcacgc aagtaatcaa aacctaattc
     2701 gctgttagtc gaataggtaa tatctgcttg gtatgcagca cgttttgcat cggaaggtaa
     2761 ccccggaata ttcactccaa cggttaagcc taaaaactca aataacggac ggttggtttc
     2821 cgcatcacgg cgggcgaggt aatcattcac cgtaacaaca tgaacacctt taccggtcaa
     2881 agcattcaaa taacaagata aagttgcagt tagggtttta ccttccccag tacgcatttc
     2941 tgcaatatta cgccccgtta gcaccatacc gccgatcagc tgtacatcaa atggtcgcat
     3001 acctaatact cgtttgcttg cttctctcac tgtcgcaaaa gcttcaggta ataggctatc
     3061 tagcgataca ccatctgcaa ggcgttgctt aaactccgct gttttatcct ttaacgcctc
     3121 atcagataat tgctcgaagg ttggttcaag cttattaatt tgtgccactc gctttcttaa
     3181 acgttttaaa gtgcgatcgt tgcttgagcc aaaaatagaa gtcagtaatt ttgaaatcat
     3241 tgtgttattc ctaaatataa aaatgggtta atcaattaat ggtaaaatta aattatattt
     3301 aggtttgtgg cccggctcga atggggtaag cattttgtct atccaagcgg taggagtttg
     3361 caaaaaattc gcaaaaatgc accgcttgtg gtttaatttc cacaatttta tggattaact
     3421 ctgcaataaa aagcgattgt tgctcaatat cattagcgga ttgagcatat tgaagaaaag
     3481 attgattaag aacggtttcc tgttcacttt cattggcgta cgcaacctga atttcaggta
     3541 aagcaagtat cgcaaccatt cccaaaaaga gttgcgacca aaaaggcgtt cgatgaaagt
     3601 gttttaaaaa taagctcatt aaattaagat aaatgaaaaa attgggctaa ttatacgcta
     3661 aagtaaagcc gaatgagtaa attattgggt caagtatcgt aaaatcaagc ctaaaataag
     3721 acgaaatgta aagaaacaga tgaaaaattc agcacctaaa aagattaatg acattttaca
     3781 gaactcaagc ttaagccgta ttgtcgaaaa agcaaacttc attaacgatt taaaccaaaa
     3841 aattcagaaa agatggccag aatcttatcg tgggctttac cgagtagtga atttagttga
     3901 taatcagctt attgtgagcg ttaagaatgc aaccgtacgg caaggtttaa tcttgcaaca
     3961 aaatatgtta ctaaaacaga tacaaaccga tttacctgaa ataacccaac ttgaatttag
     4021 agtaaatccg agtgttacat aatttaattt tgaagaggaa aatagtatga aaaaaatcgc
     4081 actcattggt tttaccaccg caatgctagg ggcttgctca ttgctaccac aaaaaagcgt
     4141 tagcggtact tatgcaggtg aattaccgtg tgctgactgt gagaaaatcc aagcccagct
     4201 aaccttaaat gcagataaaa cctaccaata tgatacggta tattttaaag ataaaaaaga
     4261 atacacttac cgagacaaag gcacatacag ttgggaaccc aataagccaa atgtgattcg
     4321 tctggaaaaa gcatcaggca atcttgcctt ccaagtgtct gaacaacacg ttgaactttg
     4381 cgacccaaat ggcaacacgg taaaaaacag caataactat aaactaggta aagtacgtta
     4441 aaagcagata aaaaggattc ttaggaatcc tttttctttg taatctatcg ccgatcgcat
     4501 aaaaaaaccc ccaagcaatg tttgctcggg gataacctaa aaatgaaaaa gtattatcta
     4561 ctttaactta accaaggaaa tatctatgaa aacagtaagg aatctttcag tatgaatggc
     4621 ggtgagaggg ggattcgaac ccccgataca gtttcccata tacacgcttt ccaggcgtgc
     4681 tccttcaacc actcggacat ctcaccgaat caacaaaaag atggcgtaaa tatagcaatt
     4741 ttacacggct ctttcaagta ttttcttcac aaaataaaat aaatcatttt tatccactta
     4801 ttgcccaaca cctaagcaat ttagcgattt aggtacaagt ccgccagtcg cttcccattc
     4861 accttgggta tataggtgca aagcaagtgc gtgaacgcca ttagctaatt cctcagctaa
     4921 gcaagcatag acagcacgat gacgtgcaac tgttctctgc ccttcaaatt tatctgacac
     4981 caaagttaat ttaaaatgcg attctgctcc tctacctgag ctgtgcatat agctttcgtt
     5041 ttcgacatta aagaaaatcg gctgaaattc tgtcttaatt ttttgaataa ttgtctgttc
     5101 taccgacatt ttttgctctc gttcattgaa aatcaaaacg aaataatact atactaagca
     5161 gaaattttct cgaaatttat tcaatataga aggatttact atgaaacgct ctaaaaaaac
     5221 gttagtgtta gccactactt ttgttgccgc attactagcc ggctgccaaa gccaatccaa
     5281 cacattaaca ttctctaccc caacgccaac tgctgtattt aacacaaaca atcaaacggc
     5341 tgcggtgaat gtaatgacac aagatttacg cacctcgcgt gaaatcgcaa gctacactaa
     5401 aaacggagag gtcattcgtt taaccgcagt gcctgaagtt gctgcaatgt tccaacaagc
     5461 cgtccaacaa gacctgaatg caaaaggttt ccaaattgta caaggtgcag cgaatgccaa
     5521 tgtggtagtg aatattcgta aattctttgc cacagtagaa caaggaaact tacgctacaa
     5581 agccgatgca caagtgagtg taaaagtggc agtgcaaggt tctaaaggaa actttagcaa
     5641 aaacttcaac gctacccgtg gttacgaagg tgcatttggt gcaagcaatg atgaaatcaa
     5701 gaaagtgtta gaccaagcct attctgatgt ggtgaaagct atttacaacg ataatgaaat
     5761 cgccaatgca attcaccagt tcaaataatt aattttttct ggcaagcggt catctttctt
     5821 cgattttttg caaaaaacgt ggaaaaatga ccgcttgttg ttttctcgtt ttgtgatgtg
     5881 gctcgaaaaa taagataaat taacttgatt aaacgatcag tagcccccac aatagagact
     5941 catcgcaggg aggaaaaata tgaataatcc ttatcataat gttagccaag aatatcttga
     6001 ttatcttgct aaaaaagtaa agcaaggaaa ggaagatatt aaaaacggtc ggatttattc
     6061 acccgaagag gtcagaaaaa gagttattgc tgccgctttt agaggtgctg aaaatgccaa
     6121 aaaagttgca taatatttat tatactgaag aggccttaat agatttagag aatattgcca
     6181 tctcagttag tgaatttacc ggttatgcaa gtagtggaat taggatacta gaagaattgg
     6241 aaaatag
//
LOCUS       DANLTI010000137         6187 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.138, whole genome shotgun sequence.
ACCESSION   DANLTI010000137 DANLTI010000000
VERSION     DANLTI010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6187
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.138"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1159)
                     /gene="tolA"
                     /locus_tag="PXB09_002305"
     CDS             complement(<1..1159)
                     /gene="tolA"
                     /locus_tag="PXB09_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDL5234370.1"
                     /translation="MKSQQDRLELAVIVSILLHILLIGLLLLGSLFTKTELAAAGGSG
                     GDSDSFEAVMVDTGQVAAEYGQLLAEKKGSKASKPKVEPKEEAVEEDVEDKPTPEEIQ
                     KQKQAELAAIQEKQRQQEIERQQKLQEQQKQEQAKQEELKKQQAEEATRKKAAEAAKL
                     KADAEAKRLEAAAKQAEEEKKAKEALEKKLEQQKKAEAEKKLKEQKELKEQQAKEAKE
                     AKEKAEKEAKAKAEKEAKEKAEKEAKAKAEKEAKEKAEKEAKAKAAAEAKAAQAKNNK
                     ALDDFLNSGDIGGGSSKGGNKNSAGSQGSGGTSGLGQGTNVDGNAYGQRIKKLIQSRY
                     RVDPSFAGKQCDVKIFLSRDGTITNYQVISGDKAVCDAAVSAIVATRKVPPA"
     gene            complement(1173..1610)
                     /gene="tolR"
                     /locus_tag="PXB09_002306"
     CDS             complement(1173..1610)
                     /gene="tolR"
                     /locus_tag="PXB09_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDL5234371.1"
                     /translation="MSRRLKRNDIKSEINIVPFLDVLLVLLLIFMATAPIISQSVEVN
                     LPEDTHSQSVSNEDKTPVILEVAGVGEYKLKIDGNYVQSNGQENINESEVVAYAGEQF
                     QKDNNTLFLVAGDKVVPYEEIMKGITLLKDAGVKSVGLMTEGK"
     gene            complement(1752..2432)
                     /gene="tolQ"
                     /locus_tag="PXB09_002307"
     CDS             complement(1752..2432)
                     /gene="tolQ"
                     /locus_tag="PXB09_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDL5234372.1"
                     /translation="MQTEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILT
                     KAKKDSLAFEDRFWSGEDLNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAP
                     ESIIQGSTRAMDLALNREMESLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAV
                     KQATLQSVAPGIAEALIATAIGLFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLL
                     HRQAFSKR"
     gene            complement(2454..2855)
                     /gene="ybgC"
                     /locus_tag="PXB09_002308"
     CDS             complement(2454..2855)
                     /gene="ybgC"
                     /locus_tag="PXB09_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDL5234373.1"
                     /translation="MDFPIRVYYEDTDAGGVVYHSNYLNFFERARTEFLRQQHFSQQE
                     LFSQSLAFVVKRIEIDYKLPARLDDLLNVETTLSELKKATLIFKQRLWKDGDCLSEAN
                     VTVACVDLIKMKPVAIPDDIRQALQKSYFSI"
     gene            complement(3018..3305)
                     /gene="ybgE"
                     /locus_tag="PXB09_002309"
     CDS             complement(3018..3305)
                     /gene="ybgE"
                     /locus_tag="PXB09_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDL5234374.1"
                     /translation="MIHKLYNLTAKGLLKALSFILAAVLFATIWVNSTAFALSFGGKT
                     PYLAMLVFYGMAILWVHGIGFEIRAAIWKVIFLPLLGYLIVIPALWILLVK"
     gene            complement(3305..3403)
                     /locus_tag="PXB09_002310"
     CDS             complement(3305..3403)
                     /locus_tag="PXB09_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CydX/CbdX family cytochrome bd oxidase small
                     subunit"
                     /protein_id="HDL5234375.1"
                     /translation="MFYVTWVLGVLLAIFFATVITISIEKTGKFDE"
     gene            complement(3418..4551)
                     /gene="cydB"
                     /locus_tag="PXB09_002311"
     CDS             complement(3418..4551)
                     /gene="cydB"
                     /locus_tag="PXB09_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDL5234376.1"
                     /translation="MIDYEILRFIWWILIAVLLIGFAITDGFDMGVLNLLPIIGKSNV
                     ERRIMINTIAPHWDGNQVWLLTAGGAIFAAWPTVYATSFSGFYIAMVLVLAALFFRPV
                     GFEYRAKIDNPKWRSAWDWGLFIGGFVPSLVFGVAFGNLLQGVPFEFNNINQSQYTGS
                     FFGLLNPFALVCGIISLMMLTTQGATWLQMKTTDELHNNSRKVAQVTASIVLVAFILA
                     GVWLYFKDGFVITSELDHNAQSLLTNKTVAVQAGAWFRNYAEMPVLWVVPALVVVGAL
                     LTIIASKANRSGLAFFSSSLMIVGVILTAAVSMFPFIMPSITHPEMSLTVWDATASHT
                     TLTVMLFVAGIFVPLVLAYTIWSYIKMYGRLDASYLEENKAAY"
     gene            complement(4564..6114)
                     /locus_tag="PXB09_002312"
     CDS             complement(4564..6114)
                     /locus_tag="PXB09_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDL5234377.1"
                     /translation="MLDVVELSRLQFALTALYHFLFVPLTLGLSFVLVVMETLYVTTG
                     KEVYKDMTKFWGKLFGINFALGVTTGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIASEFN
                     FETMRMELSSFSELVLNPVTQSKFLHTVTAGYVCGAIFVLGISSYYILKGRDLGFAKR
                     SFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPN
                     TAEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSG
                     NYTEADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRV
                     MMLSGFLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQP
                     WAIYEMLPVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGR
                     YYFEQSTK"
BASE COUNT         1945 a         1343 c          982 g         1917 t
ORIGIN      
        1 gtgcaggtgg tacttttcta gttgccacta ttgcacttac cgctgcatca catactgctt
       61 tatcgccact gataacttga tagttagtaa ttgtgccatc tcgacttaag aatatcttaa
      121 catcacattg ttttccggca aaacttggat caacccgata tcgagattga attaatttct
      181 taattcgttg accatatgca ttaccatcta cattagtacc ttgccctaag ccacttgtac
      241 caccagaacc ttgtgatcct gctgagtttt tgttaccacc tttacttgaa ccaccaccga
      301 tgtctccact attgaggaaa tcatcaagtg ctttattgtt tttcgcttgg gcggcttttg
      361 cctcagcagc tgccttcgct ttagcttctt tctcggcttt ctctttggct tctttttctg
      421 cttttgcttt ggcttctttc tcagcctttt cttttgcttc tttttctgcc ttggctttag
      481 cttctttttc tgctttttcc ttcgcttctt tagcttcttt tgcctgctgt tccttcagtt
      541 ctttttgctc ttttaacttt ttctcagctt ccgctttctt ctgctgttca agcttctttt
      601 caagtgcttc tttagctttt ttctcttctt cagcttgttt agcagcagcc tctaaacgct
      661 tagcttctgc atctgctttc agttttgctg cttcagctgc ttttttacga gttgcttctt
      721 ctgcttgctg ctttttaagc tcttcttgct tagcttgttc ttgcttttgc tgttcttgta
      781 gtttttgctg acgctcaatt tcttgctgac gctgtttctc ttgaatcgcc gctaactcag
      841 cttgtttctg tttttggatc tcttccggag tcggtttatc ttccacatct tcttcaacag
      901 cttcctcttt aggctctacc tttggcttcg atgcttttga gccttttttc tctgccaata
      961 actgcccata ttcagcagcc acttgcccag tatctaccat cacagcttca aagctatcgc
     1021 tatcgccacc actgccacca gccgcagcga gttccgtctt agtgaaaaga gacccgagca
     1081 ataacaaccc gattaacaat atatgcaata agatcgaaac aataaccgct agctctagtc
     1141 tatcttgttg agatttcaca cgttatcctt ggctatttac cttctgtcat taaacctacc
     1201 gatttcactc cggcgtcttt aagtagtgta atacctttca taatttcttc ataaggtact
     1261 actttatcac cggcaactaa aaataaggta ttgttatctt tttgaaattg ttcccctgca
     1321 taggcaacaa cttctgattc attaatattc tcttgcccat tactttgcac atagttaccg
     1381 tcaattttca atttatattc accaacacct gccacctcca aaatcactgg agttttatct
     1441 tcattagaaa ctgattggct atgcgtatct tccggtaaat taacttctac actttgactg
     1501 ataattgggg ccgttgccat aaaaatcagc aataatacca acaatacatc aagaaatgga
     1561 acaatgttga tttctgattt aatgtcatta cgttttaaac gacgagacat atattcctct
     1621 ttacaggtgc ttagcacctt aattgatctg aaataaccgg cacagtgtcc cggtctcgaa
     1681 taatgcggtt acaagcggtc ttttttacga aaaactttac aaattttcat taaaaatcaa
     1741 ccgcttgtag attatctttt tgaaaaagcc tgacggtgta ataaggtcgt gaactcatca
     1801 atgaaattca catacccttg ctcaacttta cctaaacgta aattcaaacg gttatatgcc
     1861 attactgcag gaatcgccgc aaataaaccg atagccgttg caattaatgc ttctgcaata
     1921 cccggtgcga ctgattgtaa agttgcttgc ttaactgcac ttaatcccat aaaggagtgc
     1981 ataattcccc aaaccgttcc gaataaacca atatatgggc tgattgaacc cactgtgcct
     2041 aaaaacggaa tgtagttttc taaactttcc atttcacggt ttaatgctaa gtccatcgca
     2101 cgggtagaac cttgaataat cgattctggc gcatctgggt tcgcttgttg taaacgggta
     2161 aattctttaa acccaacata aaagatttgc tctgaaccat ttaatgcatc acgacgattc
     2221 tctaaacctt ggtgtaaacg gtttagatct tcccctgacc agaatcgatc ttcaaaagca
     2281 agggaatctt ttttggcttt agttaaaatt ttgctgcgct gaataatcac cgcccaagac
     2341 aaaattgaga atacaataag gatcagcatc acgatcttta ccacaatact tgcttctaaa
     2401 aataacgaaa gaagactaaa ttcagtttgc attaataaaa ctccgaatag tttttaaata
     2461 gaaaaataac ttttttgtaa tgcttgacga atatcatcag gaattgcaac cggcttcatt
     2521 ttgattaaat caacacaagc gaccgtaaca tttgcctcac tcagacaatc gccatctttc
     2581 cacaatcgtt gtttaaagat aagggttgct ttcttcaatt ctgagagtgt tgtttccaca
     2641 tttaataaat catctaaacg agcagggagc ttataatcta tttcaatcct cttaacaaca
     2701 aaagcaaggg attggctaaa aagttcctgc tgtgagaaat gctgctgtct caaaaattcc
     2761 gttcttgccc gctcaaaaaa attcagatag ttggaatgat aaactactcc gccggcatca
     2821 gtatcttcat aataaacacg aatcgggaaa tccataagca ttatttctct cattcaaaat
     2881 gaaaaaacgc ccaaaattta ggcgcaaatt gtgagatatt ttaggatcag aaatattgtt
     2941 atgcaagtat attttttggt aaattgcaaa aatatttttt atctatcaaa aataaaaata
     3001 gagacataaa aatgcctcta tttaacaagt aaaatccata atgccggaat aacaataagg
     3061 taacctagaa gtggtaaaaa aatcactttc caaatagcag ctcggatttc aaatccaatt
     3121 ccatgtaccc ataaaatagc cataccataa aataccaaca ttgctaaata cggcgttttt
     3181 ccaccaaaag aaagagcgaa agcggtcgaa tttacccaaa tagttgcaaa taatacagcc
     3241 gctaaaataa aagaaagggc ttttaacaag ccctttgctg ttaagttata gagtttatga
     3301 atcattactc gtcaaactta cctgtttttt caatgctgat cgtgatgact gttgcaaaga
     3361 agattgcaag caatacacct aagacccaag ttacataaaa catattgtgt ctccttatta
     3421 gtaagctgct ttattttctt ctaaataact agcatctaaa cgaccataca ttttgatata
     3481 tgaccaaata gtatatgcta atactaacgg tacaaagata ccagcaacaa ataacattac
     3541 agttaatgtt gtgtggctag cagtagcgtc ccaaaccgtt aagctcattt ctggatgagt
     3601 aattgacggc ataatgaatg ggaacattga tactgcagca gttaaaatca ccccaacaat
     3661 catcaatgat gatgagaaga atgctaaacc tgaacgattt gcttttgagg caataatagt
     3721 cagtaatgca cctactacaa ctaatgcagg aacaacccat aatacaggca tttcagcata
     3781 atttctaaac catgcaccag cttgaaccgc tacagtttta ttcgtcaata gagattgtgc
     3841 attatgatct aactcgcttg tgatcacaaa accatcttta aaatataacc atacacctgc
     3901 aagaataaat gccactaata caatagaagc tgtcacttgt gccacttttc ttgagttgtt
     3961 atgtagctca tcagtagttt tcatttgtaa ccaagttgca ccctgtgtgg ttaacatcat
     4021 taagctgata ataccgcaca ctaatgcaaa tggatttaat aaaccaaaga atgaacccgt
     4081 atattgtgat tggttaatat tattaaattc aaatggtaca ccttgtaata agttaccgaa
     4141 tgcaacaccg aatactaatg atggaacgaa accaccaata aataatcccc aatcccaagc
     4201 actacgccat ttcggattat caatttttgc acgatactca aaacctacag ggcggaaaaa
     4261 taatgctgca agcacaagca ccattgcaat atagaaaccc gagaacgaag ttgcatagac
     4321 tgttggccat gcagcgaaga tcgcaccacc agcggtcaat aaccatactt ggttaccatc
     4381 ccagtgaggg gcaattgtgt tgatcataat acgacgttca acattacttt taccaatgat
     4441 aggtaaaagg tttaatacgc ccatatcaaa accatcagta attgcaaagc caattaacaa
     4501 taccgcaatt aagatccacc aaataaagcg gagaatttca taatcgatca tttctaactc
     4561 ctattattta gttgattgtt caaaataata acggcctgtt tttaatgcac tagggccaag
     4621 acgaccatat ttgaacatta aatacatttc tacaactaag aatagtgtat ataaaccaca
     4681 caataagccg attgtaaacc ataaatcacc tgttgttaat gcagagtttg acacaccgac
     4741 aggtaacatt tcatagatag cccaaggctg acggccatat tcggcaagga accaaccaga
     4801 ttcaatcgca atccaaggta acggaagacc gaataacaag cctcttaata agaaacggct
     4861 actttctact ttaccacgca tattttgaat aaatgctgtc gtaatcaaga taagcatcaa
     4921 gaagccagat aacatcatta cacggaatgc ccagaatgta gggcctacat ttggaattgt
     4981 attatctgct gctttttgaa tttgttcttc agtcgcatca accacattag gtgtatattg
     5041 ttttaacaat aacccaaagc ctaaatcttt ttgtacagct ttaaatgctt ctttatccgc
     5101 ctctgtataa ttgccagaac gtaatttttc taatagtccg taggctacca taccggtacg
     5161 aacacgttgt tcattaatta cacgaatatc ttttaggcct ttaatttctt tatctaaaga
     5221 acgggttgca ataataccag ctgcataagg aatatgaatt gagaattcat ttttcatttc
     5281 cgcagtattt ggaatcacaa aagcattcca agcagctgga gcaggctgag tttcgaattc
     5341 accttccatt gcagctaatt tagtcggctg agctttaccg atttcataac cagattcatc
     5401 acccataatc agtacagaga tgatcgcaat taaaccaaaa cttgcaccta ctgagaatga
     5461 acgttttgca aagcctaagt cacgaccttt taagatatag tatgaactaa tacctaatac
     5521 aaaaatagca ccacaaacat agcctgcggt tacagtatgt aagaatttag attgtgtaac
     5581 tgggtttaat acaagttcag agaaacttga aagctccatt cgcatggttt caaagttgaa
     5641 ttcagaagca atcgggtttt gcatccaacc attagcaact aaaatccata gtgcagagaa
     5701 gttagaacca aacgcaacac agtaagttgc taataaatgt ttcgctttcg ataaacgttc
     5761 ccagccaaag aagaacaagc ccacaaaggt agattctaag aagaacgcca ttaaaccttc
     5821 aatcgctaat ggagcgccaa aaatatcacc tacataatga gaataatatg accagttcat
     5881 accaaactgg aattccattg taataccagt tgttacccct agggcaaagt taataccaaa
     5941 taatttaccc cagaatttag tcatatcttt atatacttct ttacccgtag ttacatacag
     6001 ggtttccatc accacaagga cgaaagaaag acctaatgta agcggtacga ataagaagtg
     6061 atagagtgca gttagagcaa actgcaaacg tgagagttca actacatcta acatctcaaa
     6121 cctcttatat taatatacta atttgacaat tagattactg taaaagtaat cacccacaaa
     6181 ttcactc
//
LOCUS       DANLTI010000138         6058 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.139, whole genome shotgun sequence.
ACCESSION   DANLTI010000138 DANLTI010000000
VERSION     DANLTI010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6058
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.139"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..196)
                     /locus_tag="PXB09_002313"
     CDS             complement(<1..196)
                     /locus_tag="PXB09_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234378.1"
                     /translation="MSTTLNEINITELDAGPEIKSLSLNDAVNSFLNDSACPICGKNC
                     QYWQRLKRSLNRKENQGKGDK"
     gene            complement(230..1516)
                     /gene="purD"
                     /locus_tag="PXB09_002314"
     CDS             complement(230..1516)
                     /gene="purD"
                     /locus_tag="PXB09_002314"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDL5234379.1"
                     /translation="MNILIIGNGGREHALAWKVRQSPLADKVFVAPGNAGTAMENGIE
                     NVAISATDVPALVTFAKQNSVGLTIVGPEAPLVVGVVDAFRAHGLTIFGPTQAAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPIVIKADGLAAGKGVIVAMT
                     LQEAEDAVRDMLSGNAFGEAGSRVVIEEFLDGEEASFIVMVDGKNVEPMATSQDHKRV
                     GEGDSGLNTGGMGAYSPAPVVTKAIHQRVMDEIIYPTVQGMASENTPYTGFLYAGLMI
                     MPNGQPKVIEFNCRFGDPETQPIMMRLESDLVELCLKACEGKLDSVQSKWCEQAALGI
                     VLAAAGYPGDYRKGDEIIGIPTSTSNQKVFLAGVEQKEGKLLTNGGRVLCATALGNSV
                     FEAQQQALQLAEQIQWQGKFYRRDIGYRAVARKQAK"
     gene            1750..2124
                     /gene="rpsF"
                     /locus_tag="PXB09_002315"
     CDS             1750..2124
                     /gene="rpsF"
                     /locus_tag="PXB09_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDL5234380.1"
                     /translation="MRHYEIVFMVHPDQSEQVPAMIERYTASVKEAGGQVHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPM
                     VKAKESKVAEAVAEVESEEAGE"
     gene            2099..2473
                     /gene="priB"
                     /locus_tag="PXB09_002316"
     CDS             2099..2473
                     /gene="priB"
                     /locus_tag="PXB09_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDL5234381.1"
                     /translation="MNQRKQASNLPIDNCLILSGTVSSLVKQSLNPLGVPHYSFWLEH
                     RSIQTEVNLERQAWCKIQVVLAGNQFSYLTQQIKLGESVRIKGFIHTHKDFNGLNQLV
                     LHTEQIEFIDQEKPNGTLFPSS"
     gene            2448..2675
                     /gene="rpsR"
                     /locus_tag="PXB09_002317"
     CDS             2448..2675
                     /gene="rpsR"
                     /locus_tag="PXB09_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDL5234382.1"
                     /translation="MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLALLPYTDNHQ"
     gene            2691..3140
                     /gene="rplI"
                     /locus_tag="PXB09_002318"
     CDS             2691..3140
                     /gene="rplI"
                     /locus_tag="PXB09_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDL5234383.1"
                     /translation="MQVILLDKVAHLGSVGDQVTVKSGFARNFLIPQGKAVMATAANI
                     AHFEARRAELEAKAAAALATAQERAAKIAALAAVSVSATAGDDGRLFGSVSAKDIAEA
                     LTAAGVGVAKSEVRLGEGPLRTTGEHQVKIHLHPEVNATVAVNVVAE"
     gene            complement(3204..3980)
                     /gene="dnaQ"
                     /locus_tag="PXB09_002319"
     CDS             complement(3204..3980)
                     /gene="dnaQ"
                     /locus_tag="PXB09_002319"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDL5234384.1"
                     /translation="MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRR
                     LTGRTYHVYIKPPREVDEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNA
                     PFDVAFMDQEFSYLPNPPAKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSK
                     RVLHGALLDAEILADVFLMMTGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAII
                     LKANDEEEESHLALLKLIEKKSKGNCLWTKALTDTAEISH"
     gene            complement(4068..5738)
                     /gene="ettA"
                     /locus_tag="PXB09_002320"
     CDS             complement(4068..5738)
                     /gene="ettA"
                     /locus_tag="PXB09_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDL5234385.1"
                     /translation="MSTQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGA
                     GKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKLAPQQTVREAVEEAVAEVKNAL
                     TQLDEVYAMYADENADFDKLAAKQAELEAIIQAHDGHNLQNQLERAADALRLPDWDAK
                     IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITH
                     DRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLAQEQAAESARQKSIEKELEW
                     VRQNPKGRQAKSKARMARFEELNSGEYQKRNETNELFIPPGPRLGDKVIEVQNLTKSY
                     GDRTLIDDLSFAIPKGAIVGIIGANGAGKSTLFRMLSGKEQPDSGSIVLGETVVMASV
                     DQFRDAMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGE
                     RGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVISHDRWFLDRI
                     ATHILDYGDEGKVTFYEGNFSDYEEWKKKTFGEAATQPHRVKYKRIAK"
BASE COUNT         1590 a         1401 c         1277 g         1790 t
ORIGIN      
        1 ctttatctcc cttaccttga ttttcttttc tatttaaaga tctttttagt ctttgccaat
       61 attgacagtt ttttccacat atagggcacg cagagtcatt tagaaaagag tttactgcat
      121 cgtttaatga tagtgattta atttcggggc ctgcatcgag ttcagtgata ttaatttcat
      181 taagtgttgt actcataata aatttttcct tgttttaaga gtttataaat tatttcgctt
      241 gttttcttgc cactgctcgg tagccaatat ctcggcgata gaatttgcct tgccattgaa
      301 tttgttcggc aagttgtaag gcttgttgtt gagcttcaaa tacactgttg ccaagtgcgg
      361 tggcacaaag tacacgtcca ccgttggtga gcagttttcc ttctttttgc tcaacccctg
      421 ctaagaaaac tttttgattg gaggtagagg tcggaatgcc tatgatttca tcgcctttac
      481 ggtaatcgcc cgggtagcct gcggcagcta aaacaatgcc taatgcggct tgttcacacc
      541 attttgattg cacgctatcc aatttgcctt cgcacgcttt taagcacaat tcaacgaggt
      601 ctgattccaa acgcatcata atcggctgag tttcagggtc tccaaaacgg cagttaaatt
      661 caatcacttt cggctgaccg tttggcataa tcattaagcc ggcatagaga aaaccggtgt
      721 aaggggtatt ttcgcttgcc attccttgca cggtcgggta aataatttcg tccattacac
      781 gttggtggat tgcctttgtt accaccggag caggggagta agcccccatt ccgccggtat
      841 ttaagccgct atcgccctcg ccaacacgtt tgtggtcttg tgaggttgcc attggttcga
      901 catttttgcc gtccaccatc acaataaaac tggcctcttc tccgtctaaa aattcctcga
      961 tcaccacacg gctgccggct tcaccaaagg cgttgcctga cagcatatca cgcactgcat
     1021 cttccgcctc ttgtaaagtc attgcaacaa ttacgccttt gcctgcggct aaaccgtctg
     1081 ctttgattac aatcggtgca cctttttgtt ttaagtaggc aagtgccggt tcaatttcgg
     1141 tgaaattttg gtattctgcg gttggaatct gatggcgagc caagaaatct ttggtaaatg
     1201 ctttagaacc ttctaattga gcagcggctt gggtcgggcc gaaaatggtt aaaccgtggg
     1261 ctcgaaaagc atcaaccacg ccaactacta acggtgcttc agggccgaca atcgtcaaac
     1321 ctacgctatt ttgtttagcg aatgtaacta aggcaggcac gtcagtggcg gaaatagcta
     1381 cattttcaat gccgttttcc atcgctgtgc cggcattgcc gggggcgaca aagactttgt
     1441 ctgcgagcgg cgattgacga actttccaag caagagcgtg ttcacgccca ccgttgccga
     1501 taattaaaat attcattggg attccttgca aaaatgataa agcaaacgtt tgcgtattgt
     1561 acttgatttg tttatctgct gacaagcagt cgtttttctc ggattttttg caaaatacga
     1621 aattgttgct tgcaaaatag gcttttttca gtataatcct gccgttcagt cacattcgtt
     1681 ttttaatcct tgcttccaca agttggtgac tggctaaagt tggaggctgc taacccgtaa
     1741 ggatagtcaa tgcgtcacta cgaaatcgtt tttatggttc acccggacca aagcgaacaa
     1801 gtaccagcaa tgattgagcg ctacacagcg tctgtaaaag aagctggcgg tcaagttcat
     1861 cgcttagaag attggggtcg tcgtcaatta gcatacccaa tcaacaaact tcacaaagca
     1921 cactatgtgt taatgaatgt agaagcacct caaagtgtaa tcgacgagtt agaaactaac
     1981 ttccgttata acgatgcagt tcttcgtaac ttaatcgttc acactaaagc ggcagtaact
     2041 gaagcgtcac caatggtgaa agcgaaagaa agcaaagttg ctgaagcggt agctgaagtt
     2101 gaatcagagg aagcaggcga gtaatttgcc gattgataat tgtttaatct taagcggaac
     2161 ggtttccagc ttggttaaac aaagcctaaa cccccttggt gtgcctcatt acagtttttg
     2221 gttagaacat cgttcaatcc aaaccgaagt gaatttagaa cgccaagcgt ggtgcaaaat
     2281 ccaagtggtt ttggcaggca atcaatttag ttatttaacc caacaaatta agctcggtga
     2341 gagcgtgaga attaaaggtt ttatccatac tcacaaagac tttaacggtt taaatcagtt
     2401 agtcttacac accgaacaaa ttgaatttat agatcaggag aagccaaatg gcacgttatt
     2461 tccgtcgtcg taagttctgc cgtttcacag cggaaaatgt tgttgaaatc gattacaaag
     2521 atatcgctac attaaagaac tacatttctg aaagcggcaa gattgttcct agccgtatta
     2581 ctggtactcg tgcgaagtat caacgtcaat tagctcgtgc aattaaacgc gctcgctacc
     2641 ttgcgttact tccatatact gataaccacc aataatcagg agagagtaca atgcaagtta
     2701 ttttattaga caaagttgct cacttaggtt ctgtgggcga ccaagtaacc gttaaatctg
     2761 gttttgctcg taacttctta atcccacaag gtaaagcggt tatggcaact gcggcaaaca
     2821 ttgctcactt tgaagcacgt cgtgcagaat tagaagcaaa agctgcagca gcattagcaa
     2881 ctgcacaaga acgtgcagcg aaaattgcag cattagcagc agtatcagta tctgcaactg
     2941 caggtgatga tggtcgttta ttcggttctg tatcagctaa agacatcgct gaagcattaa
     3001 ctgcagcagg tgttggagtt gctaaatctg aagttcgttt aggtgaaggt ccacttcgta
     3061 caaccggcga acaccaagtt aaaattcact tacaccctga agtgaatgca actgtagcag
     3121 taaacgttgt tgctgaataa tcagtagaaa tagaaaaccc agcgaaagct gggttttttg
     3181 tttgctttat ttattggtta gaatcagtga gatatttctg ctgtgtcggt taatgctttt
     3241 gtccataggc aatttccttt ggattttttc tcaatcagtt tcagaagtgc taaatgcgac
     3301 tcttcctctt catcgtttgc tttaagaata attgcctcat cggcatttaa cacaattgca
     3361 gaaaattctt cttcaatatc aataacttca cttaccactt cagtttcttc ttcgcctaat
     3421 aatgaaatct gaccgccggt catcattagg aatacatcag ctaagatctc cgcatccagt
     3481 aacgccccgt gtagtacacg cttgctatta tcaatgccga gcctgtcgca aagtgcatct
     3541 aaattattcc gtttgccggg gtacattctt cgtgccattt gcaggctatc ggttacggta
     3601 cacatttctg cggtttttgc cggtggatta ggcagataag aaaattcttg atccataaac
     3661 gccacatcga agggggcatt gtgaataatt aattccgcac ctttgatgaa atccaaaaac
     3721 tcctcggcaa tttcagcaaa aacaggttta tcttgcaaaa attcattggt gatgccgtga
     3781 actgcaatcg cctcttcatc tacctcacgc ggtggcttga tataaacgtg ataagttctg
     3841 ccggttaaac ggcggttaat gacttcaacc gcaccgatct caataatatt atgcccaatc
     3901 tgtggcgggc cacctgccat attcattcct gtggtttcag tatccagcac tacttggcgg
     3961 ataatttttt cttctgtcat attcaattta aaattgtagg ggtgaaatat ttttatccct
     4021 taattctgca tttgattagg ggcgaaacat atttcgcccc tacattgtta cttcgcaatc
     4081 cgtttatatt tcactcggtg cggttgggtg gcggcttcac cgaaggtttt cttcttccac
     4141 tcttcatagt cggagaagtt accctcgtag aacgtcactt tgccttcatc gccgtagtct
     4201 aaaatatggg tggcgatacg gtctaagaac cagcggtcgt gcgaaattac cattgcacag
     4261 cccgggaact ctaagatcgc attttccaac gcacgcaggg tttctacgtc taagtcgttg
     4321 gtcggctcgt ccagtaacaa cacgttaccg ccacgttgta gtagcttcgc caagtgtaaa
     4381 cgaccacgtt caccgcctga aagctcgccc acacgttttt gctgatctac gcctttgaag
     4441 ttgaaacgcc ccacataagc acggcttggg atttcaaagt taccaatcgt gagaatatcc
     4501 tgcccgttcg acacctcttc ccacacggtt ttcttatcgt ccatcgcatc acggaactga
     4561 tcgaccgatg ccattaccac cgtttcacca agcacgattg aaccagaatc cggctgttct
     4621 ttaccagaaa gcatacggaa caaggttgat ttacccgcac catttgcccc gataatcccg
     4681 acaatcgccc ccttcggaat agcgaacgac aagtcgtcaa tcaaagtgcg atcgccgtaa
     4741 gatttagtca ggttttgtac ctcgatcact ttatcaccta agcgtggacc cggtggaata
     4801 aagagttcgt tagtctcgtt acgtttttga tattcgcctg agttaagctc ttcaaagcgt
     4861 gccatacgag ccttactttt cgcttggcga ccttttggat tttggcgtac ccattccaac
     4921 tctttctcaa tcgatttttg acgagccgat tccgccgctt gctcttgtgc caagcgtttt
     4981 tctttctgct ccaaccaaga agagtagtta ccttcccaag gaatgccttc accacggtca
     5041 agctctaaga tccagcccgc aacgttgtct aagaagtaac ggtcgtgggt aattgccact
     5101 acggtgcctt cgtagtcgtg gaggaaacgc tccaaccacg ccaccgattc cgcatctaag
     5161 tggttggtcg gctcatctaa caataacata tccggttttt ccagcaacag acggcaaagt
     5221 gccacacggc ggcgttcacc ccctgataaa tgctcgattt ttgcgtccca atccggcaga
     5281 cgtaacgcat cggcagcacg ctctaactgg ttttgaaggt tatggccatc gtgggcttga
     5341 ataatcgcct ctaattccgc ctgttttgcc gctaatttgt cgaaatcggc attctcatca
     5401 gcatacatcg catagacttc atcaagctgg gttaaggcgt ttttcacttc cgcaaccgct
     5461 tcttccaccg cttcacgcac ggtttgctgt ggggcaagtt tcggttcttg tggaagatag
     5521 ccgattttaa ttcccggttg tggacgagcc tcgccctcga actctttatc tacgcccgcc
     5581 ataatgcgta aaagcgttga tttacccgcc ccgtttaagc cgagcacccc gattttcgcc
     5641 cccgggaaaa agctcaggga aatatcttta agaatgtgac gcttcggcgg cacgactttg
     5701 ccgacacggt gcatcgtata tacaaattga gttgacattg gttgtattcc tcacaaaaaa
     5761 attcgcctta ttttacttga atttacagcc aaaatatagg gtggttttgg cttttggtaa
     5821 agtaaccttt tccaatagag atgttatttg aggctgcata gtactatgca tttctcttac
     5881 cttgacaggt aagagaaaca aatcctgaag gaaaaaaatt ttaaggaagt tattctatgc
     5941 aatatgtatg tccaaaaaca ctcaaattat tcaacagcat tgttggttgt tataagggag
     6001 aagattaatt ctctacctca tcaaggcttg attttagatt taatatccat ttctaaag
//
LOCUS       DANLTI010000139         6017 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.140, whole genome shotgun sequence.
ACCESSION   DANLTI010000139 DANLTI010000000
VERSION     DANLTI010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6017
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.140"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(226..1413)
                     /locus_tag="PXB09_002321"
     CDS             complement(226..1413)
                     /locus_tag="PXB09_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5234386.1"
                     /translation="MSNNNRSALLGAAFLMATSAIGPGFLTQTATFTQTLLASFGFVI
                     LLSILLDIGAQLNIWRIVAVSEKKAQDIANAVLPGAGYFLALLIVMGGLAFNIGNVGG
                     AGLGLNILTGLSPEMGAVVSGAIAVGVFLFHEAGKVMDRFAQIMGFVMIALTIFVAVK
                     ANLPIDDAVVHTFVPEKLDVIAIVTLVGGTVGGYITFAGAHRLLDAGIKGKENLKEVS
                     KSSVSAILIASIMRVVLFLAVLGVVSMGVQLDPKNPAATPFAHVAGDVGLMIFGVVIW
                     AASITSVIGAAYTSVSFITSFSPFIEKHKNCFIVAFIVVSTAVLATIGRPAQVLVFVG
                     TLNGLILPISLGLILLAAHKTKIVGDYKHPVWMTVSGAIVVILMAVLSAMTLSKYISG
                     LMA"
     gene            complement(1688..2425)
                     /gene="pxpA"
                     /locus_tag="PXB09_002322"
     CDS             complement(1688..2425)
                     /gene="pxpA"
                     /locus_tag="PXB09_002322"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDL5234387.1"
                     /translation="MNHVDLNVDLAEGCGNDHSLLQLVTSANVCCGLHAGDYNEMRKA
                     INWAKENSVRVGAHPSFPDRENFGRTNMQLPDDELKACLLYQLGAAKALCDAENMPMS
                     YVKPHGALYNMAAKDPHLATLIANTVKQFDPNLKLMGLSGSLMLSIAEQHGLETISEV
                     FADRHYLADGSLVPRTRDDAMVESDDEAISQVLQMVLDGTVPTVDGGNVAIKADSICL
                     HGDGEHAVVFAERIKKELQAKGILVKA"
     gene            complement(2412..3341)
                     /locus_tag="PXB09_002323"
     CDS             complement(2412..3341)
                     /locus_tag="PXB09_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDL5234388.1"
                     /translation="MIYIEIIQGFAHIQDLGRYGYRHLGVSHGGAMDSLALQAGNLLL
                     KNANNAPAIELTLGGMRITFDCDTPFCLTGALVEAELDGTPVFSYYRYTANARQTLTI
                     KRIVLGNYAYLCVAGGFLVPQVLGSASTALKAQFGGFQGRMLKAGDNIATGRRDSRLS
                     LMSIEPIDFTSRIRATASSEYEAFTADSRERFWQQGWQLQNNSNRMGYRFAEKALELT
                     ASLEMLSYAAPSGTVQVPPDGQPIVLMADAQTTGGYPKIACIIQADLGRLAQNPFGST
                     VQFEQVSREQAVEIYQKDQNYLETIRRKANESR"
     gene            complement(3338..3985)
                     /gene="pxpB"
                     /locus_tag="PXB09_002324"
     CDS             complement(3338..3985)
                     /gene="pxpB"
                     /locus_tag="PXB09_002324"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDL5234389.1"
                     /translation="MLTIHHTSEHSLLCLAEPPAELAKQQQIWRVAEQARALDGVLEV
                     VVGMNNFTLFHAIGTDSTRLIQAVQQLWENDQAQAAQSPRLIEIPVHYGGEFGEDLFE
                     VAQFHNTTPEEIIRRHTEPTYTVFMIGFQPGFPYLNGLPQNLHTPRRNVPRTKVPAGS
                     VGIGGRQTGIYPFTSPGGWQLLGRTELPLFDIQHNPPTLLTAGDNVRFVAESITL"
     gene            complement(4079..4903)
                     /locus_tag="PXB09_002325"
     CDS             complement(4079..4903)
                     /locus_tag="PXB09_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDL5234390.1"
                     /translation="MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDG
                     VRGFWDGQQLISRQGYPLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKG
                     WHKLKLQVFDVPNAQGNLIERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSV
                     LEQGGEGVIVRNPNAGYIQGRSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCE
                     NQRGRFRIGSGFKDKERENPPPIGSIITYKYRGVTESGKPRFATFWRIRNDQISEN"
     gene            complement(5037..5861)
                     /locus_tag="PXB09_002326"
     CDS             complement(5037..5861)
                     /locus_tag="PXB09_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234391.1"
                     /translation="MEHFIGLGVAGNFAGHLEQAGEEADFAKVKTVEAVQPKAIFPFY
                     VPAENLGDYQFLSTYPLSNTAINFPSDADNLQIEPEVALICEIGYQDQQVVSLTPTHF
                     AAYNDCSIRRPNANKICEKKNWGASSKGLSAIHLPLDNFNKGGTLDNYNIACFHKRNG
                     ELNTYGIDSPAVEYSYFHQKLLDWIVERMNNQPDEGPMNNISEMLKQANYPTKAIISI
                     GATRYTPFGESNLLQVGDVSMVVVYNVKKYSHSQIEEMAKLETFSEDISALIQTVR"
BASE COUNT         1602 a         1408 c         1360 g         1647 t
ORIGIN      
        1 atttatacct tccgcaaaga gttctgcagg tgccataatt tatccttaaa atgtagaaat
       61 gatgaagaaa atgtagaaaa aattcagatt tatttcaaat tatttagcct caaaatgagt
      121 ggtagatcac aaactttaaa cgcaagcggt cagattttac aaatttttta caagagtagt
      181 taaaatttgc aaaacctgac cttaggttag cttgaagcta agtcgttatg ccattagccc
      241 cgaaatatat tttgaaaggg tcattgcact tagcaccgcc attagaatca ccacaatcgc
      301 ccctgaaacg gtcatccaca cagggtgttt gtagtcgccc acaatcttgg ttttgtgagc
      361 tgccagcaga attaacccga gggaaatcgg tagaattaag ccgttaagcg tccctacaaa
      421 caccaagact tgtgccggtc tgccgatggt tgccagcacg gcggttgaaa ccacaataaa
      481 ggcgacaatg aaacagtttt tgtgtttttc gataaatggc gagaatgaag taatgaagga
      541 aaccgaggta taagccgccc caatcacaga ggtaatggag gctgcccaaa tcaccacgcc
      601 gaagatcatc aaaccgacat cgccggcaac gtgggcaaat ggggtagccg cagggttttt
      661 cggatcaagt tgcacgccca ttgacaccac gcccagcacc gctaaaaaca gtaccacacg
      721 cataattgag gcgattaaaa tggctgacac cgagcttttg ctcacctctt ttaaattctc
      781 tttgccttta atgcctgcat caagcaaacg gtgcgcacca gcaaaggtga tgtatccacc
      841 aacagttccg cccactagcg tgacaatcgc aatcacgtct aatttttccg gcacaaaggt
      901 atgcaccacc gcatcgtcga ttggcagatt ggcttttacg gcaacgaaga tggttaaagc
      961 aatcatcaca aagcccataa tttgtgcaaa tctgtccatc actttaccag cttcatggaa
     1021 caggaacacg cccacggcaa tcgcaccgct gaccaccgca cccatttcag gggaaagtcc
     1081 ggtgagaatg tttagcccta aacctgcacc gcccacgttg ccgatattaa aggctaaacc
     1141 gcccatcacg ataagcagag ccagaaagta acctgccccc ggcaatacgg cattggcgat
     1201 gtcttgagct ttcttttccg atactgctac aattcgccaa atattcagtt gagcaccgat
     1261 atcaagcaag atcgagagta agatcacaaa gccgaagctg gcaagtaggg tttgggtgaa
     1321 ggtggctgtt tgggttaaga accccggccc gatggcggag gtcgccatta aaaatgctgc
     1381 cccgagtagg gcgctacggt tgttgtttga cattgtgttg gttccttttt tgttgttaat
     1441 gagtcattat tcgtggattt atcatggtaa tattcccctc tttagcaaag aggggttagg
     1501 ggagatttgg cagtagaact catcgaagtg agagagttaa taatgctcaa tttaacctct
     1561 tgaaattact tattttctcc gtaaatcgct tctgtcaaat ctcccccagc ccctcttttc
     1621 taaagagggg agttcgatct ccaagagttt tatttctggt tttccgtcca ttttgactaa
     1681 aacaggatca ggctttcacc aaaatcccct ttgcctgtaa ctctttttta attcgctcgg
     1741 caaataccac ggcgtgttcg ccgtcaccgt gtaagcaaat gctgtcggct ttaatcgcca
     1801 cattaccacc atcaacggtt ggtacagtgc cgtctaacac catttgcaag acttggctga
     1861 tcgcttcatc atcgctttct accattgcat catcacgggt gcgaggcacg agcgagccgt
     1921 cagctaaata gtggcggtcg gcaaagactt cggaaatggt ttccaaaccg tgctgctcgg
     1981 caatgctcaa catcaggctg ccggataagc ccatcagttt gaggttggga tcgaactgtt
     2041 tgaccgtatt ggcgataagg gtggcaaggt gagggtcttt ggcggccata ttgtataaag
     2101 cgccgtgcgg tttaacgtag ctcatcggca tattttccgc atcacataag gctttggcgg
     2161 ctcccagttg gtagagcaga caggctttaa gttcatcatc gggcagttgc atattggtac
     2221 gcccaaagtt ttccctatct ggaaaactcg ggtgagcgcc aactcgcacg ctgttttcct
     2281 tcgcccagtt aatcgcttta cgcatttcat tgtaatcacc ggcgtgcaag ccacagcaga
     2341 cattcgccga agtaacgagc tgtaataatg aatgatcgtt gccacaacct tcggcaagat
     2401 cgacatttaa atcaacgtga ttcattcgct tttctccgaa ttgtttccaa ataattttga
     2461 tctttttgat aaatttcgac cgcttgttca cggcttactt gctcaaattg caccgttgag
     2521 ccgaacggat tttgtgccaa ccgcccgaga tcggcctgaa taatgcaggc aattttcgga
     2581 taaccaccgg tggtttgggc atctgccatc agcacaatcg gctggccgtc cggcggcact
     2641 tgcaccgtac cactcggggc tgcgtaggag agcatttcaa gggaagcggt caattccaac
     2701 gctttttctg caaaacggta gcccatacgg ttgctgttgt tttgcagttg ccacccttgt
     2761 tgccaaaagc gttcacggct atctgcggta aaggcttcat attcgctcga agcggttgcc
     2821 cgaatgcgtg aggtgaaatc aatcggctca atcgacatca aagaaagtcg gctgtctctg
     2881 cggcctgtgg cgatgttatc gccggctttt aacattctgc cttgaaaacc gccaaattga
     2941 gctttgagag cggtacttgc cgaacctaac acctgcggca ccagaaaacc gcctgccacg
     3001 cataaatagg cgtaattgcc gagaacaatc cgttttatcg tcagcgtttg acgggcgttg
     3061 gcagtgtagc ggtaatagga aaaaaccggc gtgccgtcca gctccgcctc caccaatgca
     3121 ccggtgaggc aaaatggcgt gtcgcaatca aaggtaatcc gcattccgcc aagggtaagt
     3181 tcaatcgcag gtgcattatt tgcatttttt aacaataaat tacccgcttg taaggcaagg
     3241 ctgtccatcg caccgccgtg gctcacgcct aaatggcgat aaccataacg ccctaaatct
     3301 tgaatgtggg caaaaccctg tattatttcg atataaatca tagcgttata ctctccgcca
     3361 caaatctaac attatcgccg gctgtaagta gcgttggcgg attgtgttga atatcaaaca
     3421 acggtaactc ggttcgtcct aacagttgcc agccacctgg tgaggtaaag ggataaatgc
     3481 ctgtttgcct gccgccgatg ccgaccgaac cggcagggac tttggtgcga ggcacgtttc
     3541 ggcgtggggt gtgtaaattt tgcggtaagc cgttgaggta aggaaagccg ggttgaaagc
     3601 cgatcataaa cacggtgtaa gtcggttcgg tatgacggcg gataatctct tcgggagtgg
     3661 tattgtggaa ttgggcgact tcaaacagat cttcgccaaa ttcaccgccg taatggacag
     3721 ggatttcaat caggcgtggg gattgtgcgg cttgggcttg gtcgttttcc cagagttgtt
     3781 gaaccgcttg gataaggcgt gtgctatcgg tgccaatggc gtgaaatagg gtaaaattgt
     3841 tcattcctac caccacttcc aacacgccat ctaaggctct tgcctgttct gccacccgcc
     3901 aaatctgttg ctgtttggca agctctgcag gcggttcggc taagcagagc agggaatgtt
     3961 cgctggtatg atgaatcgtc agcataattg ccctcaaatt gttacaaaaa ggtaacaact
     4021 ttttacgctg atatatccag actgtcaatt ttattttgtt gaaaatgtga aatagctctt
     4081 aattttcaga aatttgatca tttcttattc gccaaaacgt tgcaaatctg ggcttgcctg
     4141 attctgtgac acctcgatat ttataggtaa tgattgagcc aatcggtggc ggattttctc
     4201 gttctttatc tttaaaaccg ctgccaatcc gaaaacgtcc acgttgattt tcacaagtga
     4261 ttgccccgag tttatcggta tatttccctt tgcctttatg atgggcaacc acagtgcatt
     4321 cctcatctaa aaccggtttg attttcaaaa tttgggcaga acgaccttga atatagcctg
     4381 cattcgggtt gcgaacgata accccttcgc caccttgttc cagcacagat tggtaaaatt
     4441 gttgaaggtg ggctttatct ttaatcggaa tttgctcaat aatagcgata tggagcgttg
     4501 gatgttgctt cagataattc tctaaggtcg ccagccgttc aatcaaattc ccttgtgcat
     4561 ttggcacatc gaacacctgt aatttcagct tgtgccaacc tttgggctga gcggaacgca
     4621 caatgcttga aatttcctca aatttgcccc gttcgctaaa cagttcgccg tcaatcgcaa
     4681 aaggagggaa atcttgaata aaatagtcgg gtggattgag cggataacct tggcggctga
     4741 tgagctgttg accgtcccaa aagcctcgca cgccatcgag tttttctgac attacccagc
     4801 cactgatgtc ttgatcttga tattgctcaa cgagcattaa ctcgggcgat ttggcaaaaa
     4861 tagggttacc aatgaagagt aggaataaga gcagtttttt catagtctct ccgaaatagt
     4921 gcctccgaat atgcaaggca ctataaagga aagcgtgcaa acagtcagaa atgaatctca
     4981 atttttcgac gcagatcgca aaattttccg aaaaactgat cgcttgagtg agaaatttaa
     5041 cgtactgttt gaattaaagc agaaatatcc tcgctaaagg tttccaactt cgccatttct
     5101 tcaatttggc tatgagaata tttcttcaca ttgtaaacga ccaccatact tacatcacct
     5161 acttgcaata aattactttc gccaaaaggc gtgtagcgtg ttgccccaat gctgataatc
     5221 gctttagttg ggtagtttgc ctgttttaac atttcggaaa tgttgttcat cggaccttca
     5281 tcgggctgat tattcattct ctctacaatc caatcgagca atttttgatg gaaatagctg
     5341 tactccaccg cagggctgtc gatgccgtag gtattcagct cgccattacg tttatggaaa
     5401 caagcgatgt tgtaattatc cagcgtgccg cctttgttga agttatctaa cggaagatga
     5461 attgccgaaa gccctttaga cgaagccccc cagtttttct tttcacagat tttattcgca
     5521 ttcggacggc ggatagagca gtcattgtaa gccgcaaaat gggttggcgt gagcgaaacc
     5581 acttgctgat cttggtagcc aatttcacaa attaacgcca cttcaggctc aatttgcaga
     5641 ttatcagcat cactcgggaa attaatcgca gtatttgaaa gcggataggt ggataaaaac
     5701 tgataatccc ccaaattttc cgccggcaca taaaacggga aaatcgcctt tggctgcact
     5761 gcttccactg ttttcacttt cgcaaaatcc gcctcctctc cggcttgttc taaatgtcca
     5821 gcaaaattgc cggccacgcc taaaccgata aagtgttcca taatctactc cttaattggt
     5881 aaaagttgga taaaatttta ccgcttgtaa ccaaaaattg cgaatgttta ttttgatctg
     5941 attgatagaa aattattgaa ttgagattaa atttagccat attttgaaca taaaattagc
     6001 gctttgttat aaaaaca
//
LOCUS       DANLTI010000140         6010 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.141, whole genome shotgun sequence.
ACCESSION   DANLTI010000140 DANLTI010000000
VERSION     DANLTI010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6010
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.141"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            184..402
                     /locus_tag="PXB09_002327"
                     /pseudo
     CDS             184..402
                     /locus_tag="PXB09_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390712.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            complement(454..669)
                     /locus_tag="PXB09_002328"
     CDS             complement(454..669)
                     /locus_tag="PXB09_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234392.1"
                     /translation="MQTEKRGRGRPKSGLTLQELQAKSDAKRGVRLKSFKFHEDFIAQ
                     LEQLAEQHGISQTQVIVQAVEQFSKGA"
     gene            1214..1915
                     /locus_tag="PXB09_002329"
     CDS             1214..1915
                     /locus_tag="PXB09_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234393.1"
                     /translation="MSTQISTQTISFNNQALITFEQNGTHYTAMKPICENIGLTWHAQ
                     YERIKRDEILSQGILIIRIPTNGGDQQMICLPIEYLNGWLFGIDINRCKPEIRETLIK
                     YKKECYQALHDYWFKGKAERSQIAPIVEPKIPMELTKKEWLRFASMWYALYNSLEVLA
                     TLEKPLRAIGSPFGATAYTHATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTT
                     LRQYQPKGLGGLVRI"
     gene            2169..2345
                     /locus_tag="PXB09_002330"
     CDS             2169..2345
                     /locus_tag="PXB09_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234394.1"
                     /translation="MTEEDKEYLQTKIENEGFEYAFVSYSDFEEVQDEKFHGLRKAYL
                     KARSELAEYIDIED"
     gene            2433..2816
                     /locus_tag="PXB09_002331"
     CDS             2433..2816
                     /locus_tag="PXB09_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234395.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEEDQIRCPKTYAKL
                     REILEANEENVVRIGNVSISIGSTT"
     gene            2866..3087
                     /locus_tag="PXB09_002332"
     CDS             2866..3087
                     /locus_tag="PXB09_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5234396.1"
                     /translation="MNIYTDFLSREEIEFITQCKQKNLIKKQLNIMGIPFKENANGFP
                     VVRRDYAQAKQRKPIATNDSDWVSNAFKA"
     gene            3109..4149
                     /locus_tag="PXB09_002333"
     CDS             3109..4149
                     /locus_tag="PXB09_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5234397.1"
                     /translation="MARPRKYENNGLPQNLLCRRRKRANGSIVEYYFYVLADGKERSL
                     GTNKHEAILEAAKLNFENSRKSPIVLFIDVAKRYELEVVPTKKAKNTRQSNLQAIHWL
                     CKFFGNPPAPLEKIEPKHISQYLQWRKDTPAVANIEVGLFNTIWNMAREWGYTALPSP
                     SQGVKKFPTKYREVYVEDYILDKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIY
                     DGILHITQQKTGKKVRFEISGRLKEILDKRLGYESDWIFTNKWGKKLKRRSLGDHFKE
                     IRERAMKAYPELADEIAKVQMRDMRAKAATDISLMTTDEQAQKQLGHTSKRMTHHYIR
                     KDKILKPTDEIT"
     gene            complement(4308..4595)
                     /gene="rplY"
                     /locus_tag="PXB09_002334"
     CDS             complement(4308..4595)
                     /gene="rplY"
                     /locus_tag="PXB09_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDL5234398.1"
                     /translation="MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILD
                     HDKVNNAQVHDSFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA"
     gene            complement(4747..>6010)
                     /locus_tag="PXB09_002335"
     CDS             complement(4747..>6010)
                     /locus_tag="PXB09_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HDL5234399.1"
                     /translation="DLKQQALDFHEFPIPGKISVTPTKALDTQHDLALAYSPGVAEPC
                     LAIEKDPSASYRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAGID
                     VFDIEINETDPEKLVEIIASLEPTFGGINLEDIKAPECFYVEQKLRERMGIPVFHDDQ
                     HGTAIITGAAVINGLQVVGKAISEVRLVVNGAGASAIACTNLLRSLGVKKENITMCDS
                     KGVIFQGRGDKMDETKQFYAIEDNGWRTLADAVANADVFLGCSKGGALTQEMVKTMAK
                     DLLILALANPVPEITPAEAKAVRPDAIVCTGRSDFKNQVNNVLCFPFLFRGALDVGAK
                     TINEEMKMAAAHAIAELAKEPVPFEVISTYGELSFGPEYIIPTPFDPRLIVNVSIGVA
                     KAAIQSGVATRPITDWEAYAEQLKKLVA"
BASE COUNT         1959 a         1278 c         1138 g         1635 t
ORIGIN      
        1 ccttatattt ttttatgaga ttactacgaa agcgttttac tgtcagaaca aaaatttatt
       61 ttttcgatgc agatcgcaaa aatagatatt gaggcttgac accgccaaac ttcggattaa
      121 gataaccgca ctttcaagcc gtccaccaac ggcttttttt gtacctaaaa acggagaaac
      181 gaaatggcaa atagcgtaat gattgtacaa ggcgtggagg tcaaagtaac cgctcgtgat
      241 ggtgaggatt acatcagcct aactgatatg tgcaaagctt ttggagacag cgaccagctc
      301 attaaaaact ggcttcaaaa taaaaatacc attgaatttc ttcaagtttg ggaagagctg
      361 aataatccaa attttaattt ggtggaatta caccaaatta aatgcaacaa ctaattaaaa
      421 acatcgaaca gtgaagggta ggtttatagg ggcttacgcc ccttttgaaa actgctcaac
      481 cgcttgaacg attacctgtg tttgcgaaat gccgtgttgt tctgcaagct gttcaagttg
      541 agcaataaaa tcttcgtgga acttgaatga cttcaatcgc acaccacgct ttgcatcgct
      601 ttttgcttgt aattcttgaa gcgttaaacc tgatttaggg cgaccacgac ctcgtttctc
      661 tgtttgcatt gtcaattcct tgttgatttt taatacggaa cgttatatta tttaggaact
      721 gcctagcaga gatggcgttc tctgctagga cttttagctt tctaatctaa taagctggcg
      781 tgcttattaa gattaagatc actaggatta acaacttaag atacataatc cagttcctga
      841 tgtttgccgc tctcttcaag ggcggcttct tcattttcag accctttccg aaaacaagat
      901 tattttaata cataccaaat aaaacgcaag ctatttttta gtatttatta aaataatttt
      961 atttgacaac cgccaaactt taacttacta ttccgcccaa ggtgtcgaaa cctcatactc
     1021 taaggcggat agttcactaa tcgccactag gcgatttttt tatatccgta atcctgacta
     1081 tgtcgggagg gcgactaata caagaccgaa aggaaatacg tccagccctt accttagagt
     1141 gggttttcga acctcccgac gccactgtcg aaagtggctt gttttaaaca aatagactct
     1201 aaggattacg actatgtcaa ctcaaatttc tactcaaacc atttctttca acaaccaagc
     1261 cttaatcaca ttcgagcaaa acggcacaca ttacaccgca atgaaaccga tctgcgaaaa
     1321 tatcggcttg acttggcacg ctcaatacga acggatcaaa cgagatgaaa tcctttcgca
     1381 gggtattctt atcataagaa tacctacaaa cggtggcgat caacaaatga tctgcctccc
     1441 aattgaatac ctcaacggct ggctcttcgg cattgacatc aatcgctgca aacccgaaat
     1501 cagagaaacg ctcatcaaat acaaaaaaga gtgctaccaa gccctgcacg attactggtt
     1561 caagggcaaa gcggaacgtt cacaaatcgc cccgattgtc gaacctaaaa tcccaatgga
     1621 gctaaccaaa aaagaatggc tacgtttcgc ttcaatgtgg tacgccctct acaacagcct
     1681 tgaagtactt gctacgttag aaaaaccgtt gcgtgctatc ggttcgccgt ttggggcaac
     1741 cgcctacact cacgccaccg agtatcaaac cacgcttggc gtaatgaaac ggatacttga
     1801 accgatgtta gccgacttcg aggtcgatcc gtttgaagaa gctcactacc acaaagccct
     1861 aactacctta aggcaatacc agccgaaagg cttaggcggc ttagtccgaa tttaatttgc
     1921 aaaaaaatca cacaatccga ccgcttgtga aacatcaagc ggcggtttcc tgcacccaaa
     1981 attcaaggat taggcgatga aatacgcaaa aatcatactc tttttaaccg cctttgcagt
     2041 tgctgccgac tacttagagt tacacaacga ctgcgatggc aaaccatgca ctatcgcaca
     2101 gcgataatgc ttccccgacc ctgcccgtgc agtgtttatt tttatccact ctcaatagga
     2161 gaaacgaaat gacagaagaa gacaaagaat atcttcaaac taaaattgaa aacgaaggtt
     2221 ttgaatacgc tttcgtcagt tatagtgact ttgaagaagt ccaagatgaa aaattccacg
     2281 ggcttcgcaa ggcttattta aaagctcgaa gtgagttagc ggaatatatt gatattgaag
     2341 attaaccact gatgaactgt tcattgaaca aatgaacact tgacaaccaa ccgcttgtag
     2401 ctaactgcaa gcggttaatt tttggaggaa aaatgcacat agaagacaaa atcgcttggt
     2461 ggcttgccaa tggagagaca ggggtaagca gtaaaacaat ggctttttac cttggttacg
     2521 gaataagacc aaaaatagaa ggctacccac acgatgtatc ggatttcagg cgttgctttc
     2581 tgttgttgga gacagtccct tttttgcgaa ataggattga aaaaatggct gaacttggga
     2641 aagtttgggc tgcacttgca aaagaatggc acacattaga ggctctctac aacgaagagg
     2701 aagatcaaat aagatgcccc aaaacctatg ctaagttgag agaaatccta gaagccaacg
     2761 aagaaaatgt tgtccgcatc ggtaatgtga gcatttcgat aggttcaacg acttaacgat
     2821 tatttaacca aatccctcta aatgaggggt ttatttggag agaatatgaa catctacact
     2881 gacttccttt ctcgtgaaga gattgaattt attactcaat gcaagcagaa aaatctaatc
     2941 aaaaaacaac tcaacattat gggcattcca tttaaagaaa atgcaaatgg attccctgtt
     3001 gtccgccgtg attatgctca ggctaaacag cgtaaaccta ttgcaacgaa tgattctgac
     3061 tgggtatcaa atgcatttaa agcgtaaatt gagaagaagg aggcacttat ggcacgccct
     3121 cgaaaatatg aaaacaacgg attgccacaa aacctactct gccgccgcag aaaacgagca
     3181 aacggaagta tagttgaata ctacttttac gttcttgccg acggcaaaga aaggtctctc
     3241 ggtacaaaca aacacgaagc aattttagaa gcagccaagc taaattttga aaatagtaga
     3301 aaatccccaa ttgttttatt tattgatgtg gcaaaacgct atgaattgga agttgttcca
     3361 accaaaaaag ccaaaaacac tcgtcaatct aatttacagg ctattcattg gctatgtaaa
     3421 ttctttggta acccacctgc accgctcgaa aaaattgagc caaagcacat cagtcaatat
     3481 ttacaatgga gaaaagacac gccggctgtt gctaatattg aggtaggttt atttaacaca
     3541 atttggaata tggcaagaga atggggatac actgctcttc caagcccatc acaaggtgta
     3601 aaaaaattcc cgaccaaata tcgtgaagtt tatgtagagg attatatcct tgataaaatc
     3661 tatgaatttg cagatgaaag aatggcggat attatcgaaa cagcctattt gctgggacaa
     3721 agaccgattg atatttgtaa tatacaccgc tcacacatct atgacggtat attgcatatt
     3781 actcaacaga agacagggaa aaaagtgaga tttgaaatta gtggtcggct aaaagaaatt
     3841 ttagataaaa ggttgggata cgaatcagac tggattttta ccaataaatg ggggaaaaaa
     3901 ttaaaacggc gaagtttagg cgatcatttt aaagaaataa gggagagagc aatgaaagca
     3961 tatcctgaac ttgctgatga aatcgctaaa gtacaaatgc gtgatatgcg tgccaaagca
     4021 gccaccgata tttccctaat gacaaccgat gaacaagctc aaaaacaact tgggcataca
     4081 tcaaaaagaa tgacacatca ttacatcaga aaagacaaaa tcctcaaacc taccgatgaa
     4141 atcacctaaa aataaagccc ttttgccaaa tacaaaagag ccatttactc acctaaaatc
     4201 cgttccgaaa ctattttgta aataattgat tttattgacc taaaaaacta taaaatcgca
     4261 aaaagtttcg gaacagaaaa cagcgttaaa cccttgtaaa tcaaggatta agcacgtttg
     4321 aagtctaagt gaactaattt tggtttagtt gggtggcgtt gaattgcttg tacttttact
     4381 tgctcttctt tacctgcaac aacgatagtt aatacttcgt tatagaatga atcgtgaact
     4441 tgtgcgttgt tcactttatc gtgatctaaa atgattgata caggctctgc attaccaccg
     4501 tagatgattg caggaacttg accattgtga cgcaggcggc ggctcgcacc cttaccttgc
     4561 gcagaacgaa cttcagcttc aaatttgaat gacatagttt tattctctta aataaaatgg
     4621 ggaaatcccc gtgaatagaa aaaacagcag gcgacccagc tgtttccgaa aaaatatcgg
     4681 catatccgtc tcgatatgcc aactacgtat tttactgaag ttgcagaaaa atgcaatgta
     4741 aaaatattaa gcaaccagtt ttttcaactg ctctgcataa gcttcccaat ctgtaattgg
     4801 tcgagttgct acacctgatt gaattgctgc ttttgctaca ccaatcgaga cattcacgat
     4861 caaacgtgga tcaaatggcg ttggaataat atattccggg ccaaacgata attcgccata
     4921 agttgaaata acttcaaacg gcacaggttc tttagccaac tctgcaatcg catgggctgc
     4981 tgccattttc atttcttcat taatggtttt tgccccaaca tctaatgctc cacggaataa
     5041 gaacgggaaa caaagcacat tattcacttg gtttttaaag tctgaacgac cggtacatac
     5101 aatcgcatct ggacggacag ccttcgcttc agcaggtgta atttccggca cagggttcgc
     5161 taaagcaaga attaatagat cttttgccat tgttttaacc atttcttgcg ttaaagctcc
     5221 gccttttgaa caacctaaga aaacatctgc attcgcaacg gcatctgcca atgttctcca
     5281 accattatct tctattgcat agaattgttt ggtttcatcc atcttatcac cacgaccttg
     5341 gaaaataacg cccttagaat cgcacattgt gatattttct tttttcacac ctaatgaacg
     5401 gagtaagtta gtacacgcaa tcgctgatgc tccagcaccg tttaccacta aacgtacttc
     5461 tgaaattgct ttacctacca cttgtaatcc gttaatcacc gccgcaccgg taataattgc
     5521 cgtaccgtgt tgatcatcgt ggaacacagg gattcccata cgttcacgta atttttgctc
     5581 tacataaaaa cattcaggtg ctttaatatc ttccagatta ataccaccaa aagtcggttc
     5641 taacgatgca ataatctcca ctaatttctc cggatcagtt tcattaattt caatatcaaa
     5701 cacatcaatt ccggcaaatt tcttaaatag aacacctttg ccttccatca caggcttact
     5761 tgctaaagca ccaatattgc ctaagcctaa cactgctgta ccattagaaa ttactgcaac
     5821 taagttacct cgtgccgtat aacgataaga agctgaagga tctttttcaa tcgctaagca
     5881 aggctcagca accccaggag agtacgctaa agctaaatcg tgctgagtat ctaatgcttt
     5941 agtaggagta acggaaattt ttccggggat tgggaactcg tgaaaatcaa gcgcctgttg
     6001 ttttaaatcg
//
LOCUS       DANLTI010000141         5885 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.142, whole genome shotgun sequence.
ACCESSION   DANLTI010000141 DANLTI010000000
VERSION     DANLTI010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5885
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.142"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..272)
                     /locus_tag="PXB09_002336"
     CDS             complement(<1..272)
                     /locus_tag="PXB09_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234400.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTSYRYQQ
                     AVEQSGVDALLNQNRRVPNLKNRVDEATEQAVVKFAFDNPAFGQVRV"
     gene            complement(371..601)
                     /locus_tag="PXB09_002337"
     CDS             complement(371..601)
                     /locus_tag="PXB09_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234401.1"
                     /translation="MSLLKKAQTFISIFNEVRAKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNV"
     gene            complement(722..1039)
                     /locus_tag="PXB09_002338"
     CDS             complement(722..1039)
                     /locus_tag="PXB09_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5234402.1"
                     /translation="MLSRKEVLMTRRASMNLQQIIRNVVEYTYSYESGDKLSAEIHNT
                     LDNLSYFPRIGVIGSVENTRECFCRGYRIIYRETENQVQILAIIHCRQQYPTDYYRSA
                     FKA"
     gene            complement(1032..1190)
                     /locus_tag="PXB09_002339"
     CDS             complement(1032..1190)
                     /locus_tag="PXB09_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234403.1"
                     /translation="MTEEYQNFLIEQVKQGLDDIENGRVISLEESRQLCQKTIYETLQ
                     ELQGAVYA"
     gene            complement(1244..1399)
                     /locus_tag="PXB09_002340"
     CDS             complement(1244..1399)
                     /locus_tag="PXB09_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234404.1"
                     /translation="MLFKEKGYDEFLTQKIAKGRAELESGKGIPLEQATLLVQSTIEE
                     TAQELDD"
     gene            complement(1537..1794)
                     /locus_tag="PXB09_002341"
     CDS             complement(1537..1794)
                     /locus_tag="PXB09_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234405.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFYNYQQFMPEVEAKESLR
                     EQEPELDDGYNEEEYSEEEYSDENDASDENDNYDETYDDNF"
     gene            1808..1984
                     /locus_tag="PXB09_002342"
     CDS             1808..1984
                     /locus_tag="PXB09_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234406.1"
                     /translation="MAYVRIYQGEAYGWCAEKGEANTECPEALLVSLTGDIFEAVGGD
                     KLKGAKKWQPYKKE"
     gene            1988..2134
                     /locus_tag="PXB09_002343"
     CDS             1988..2134
                     /locus_tag="PXB09_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234407.1"
                     /translation="MDTTQKRVALFIIGLSVVMWLRKHNCCTVIFVLLLAALAFSYTM
                     EHLY"
     gene            2150..2356
                     /locus_tag="PXB09_002344"
     CDS             2150..2356
                     /locus_tag="PXB09_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234408.1"
                     /translation="MVKNVVHEEILHNRAELQQAVEKEEFCAKCDNSVVFHLRDNYHE
                     FTLGLDTILQCLHFAEEKGAIRIP"
     gene            2353..3129
                     /locus_tag="PXB09_002345"
     CDS             2353..3129
                     /locus_tag="PXB09_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234409.1"
                     /translation="MNIEYSLNHCQGDGVAFYGRLGTDDLIQLFNHLNPQKRKQKMFA
                     NLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMELYAKTADQLVFFNDSDARRNWYF
                     PTSKVYKYKGLWDEFIQDLEQYIKGTSREMESVGYQIIEASPYQTETVFKFNTENYLV
                     ELKRKPSEFYSELVDWAFGDMCDFEATIEQICQGQLCYADFEATVTDKKSEIQLGLAR
                     LSGISYSPNDRSFSGYRQELIGEAIASARHNAARFAYLHA"
     gene            3244..3656
                     /locus_tag="PXB09_002346"
                     /pseudo
     CDS             3244..3656
                     /locus_tag="PXB09_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
     gene            3670..3825
                     /locus_tag="PXB09_002347"
     CDS             3670..3825
                     /locus_tag="PXB09_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234410.1"
                     /translation="METRIVKVIYDDGDYFFTRINADEQAIRNYYAIGSSIGFDDIRK
                     IIAVEIL"
     gene            3905..4879
                     /locus_tag="PXB09_002348"
     CDS             3905..4879
                     /locus_tag="PXB09_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5234411.1"
                     /translation="MNTQPKFDLYQHITDRIVVALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDE
                     REKLDEEGNIVYDEEGNPEMERHFFINKHNLFNLDQCENLPVELYDPVSEPKQPKSEP
                     NQYDIFAEIRQIIKGMDLQVEMKPSNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHE
                     MTHATGANNRLNREGITSGKAKFGNKVYAFEELIAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVLKEDKRAIVRASGKAREACQYMLDALNVAQLADKYDVFEEAA"
     gene            4966..5163
                     /locus_tag="PXB09_002349"
     CDS             4966..5163
                     /locus_tag="PXB09_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234412.1"
                     /translation="MTKSTEIPRGHDNWVITGRDNDGKWHKERFLYYSRREAIQQFRR
                     KHNCVGKHSVIESITPQFGWY"
     gene            5240..5482
                     /locus_tag="PXB09_002350"
     CDS             5240..5482
                     /locus_tag="PXB09_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234413.1"
                     /translation="MFNLNLFKRPIELSTLESWSKFCDDVGKVAFIAIPPMIYSNYDL
                     CIKIGNISALLAITYGFLLSGRTIRQFIEKEKSRWD"
     gene            complement(5642..5830)
                     /locus_tag="PXB09_002351"
     CDS             complement(5642..5830)
                     /locus_tag="PXB09_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234414.1"
                     /translation="MLERGYVRIYQGKAYGWCAEQEDANTECPTALIVSLSNEIFEAT
                     GGDDISGAEKWEKYNSNF"
BASE COUNT         1748 a         1065 c         1200 g         1872 t
ORIGIN      
        1 actcgtacct gcccaaatgc cggattatcg aatgcaaact tcacaacagc ttgctctgtt
       61 gcctcatcca cacgattttt tagattagga acacgccgat tttgattaag taaggcatcc
      121 accccacttt gctcaactgc ttgttgatag cgataggatg tatctcgact catccccatc
      181 accttacagg cttgagagat attgcccagt tcttctgcta aatttaataa accggtcttg
      241 tgtttaatga gagggttgtt agaataaaac atgagagttt ccttttttgt ttagattgaa
      301 tttggacact catattctaa acgggaaact ctcacttttt agagtgaatt gtcagatcaa
      361 gtctgatctt ctacacatta tcataggttt ctactgcatg aataccacaa ccataatggt
      421 cagcaaagta agtagaacgc ttttgaggct taagggagaa cccattcatc tcagctctca
      481 tttcagcagc atttttcaag gcaacattta aattgtttga agactggcgt tgagcttcat
      541 ttttagctcg cacttcatta aaaatagaga taaacgtttg tgctttttta agtagagaca
      601 ttgtggttct cctgtttttt gcacctaata ttattgaact atggtaggct tggcgagcat
      661 tgccttgagt tttaattcgg ctacggtcat ttttcttttt atttccattt tatagctcct
      721 gttatgcttt gaatgcagag cgataatagt cggttgggta ttgttgacga caatggataa
      781 tggctaaaat ttgcacttga ttttctgttt ctcgatatat aattctataa cctcggcaaa
      841 agcattctct agtattttct actgaaccta taacaccaat tcgtggaaaa taagaaagat
      901 tatccaaagt gttatgaatt tccgcagata atttatcacc actttcatag ctataagtat
      961 attccacaac attacgaatg atttgttgta aattcatact tgctctgcga gtcattaaca
     1021 cctcttttcg actaagcata cacggctccc tgtagctctt gcaaggtttc atatatggtt
     1081 ttttgacaca gttgacggct ttcttctaat gaaataacac gtccgttttc tatatcatca
     1141 agtccttgtt ttacttgctc tattaagaag ttttggtatt cttctgtcat ggataactcc
     1201 tatcattagt tgtatataga tatattagca atgttacaaa ttgttaatcg tccagttctt
     1261 gagcagtttc ttcaatagtt gattgaacta acaatgtggc ttgctcaaga ggaatacctt
     1321 ttccggattc taattcagct ctgccttttg caattttttg agtaaggaac tcatcgtagc
     1381 ctttttcttt aaatagcatt ttatgttcct ttcacttatt acaaggcttt caggcatagg
     1441 gattatgttc tcctaaatgc gaaatattgg aataatttac gcttaaagca atagagtgtc
     1501 aagagcaggg tttttggaag tgtggtttgg gaatatttaa aaattatcat cataagtttc
     1561 atcgtagtta tcgttttcat cgctggcatc attttcatcg gaatattctt cttcgctata
     1621 ttcctcttcg ttatatccat catcaagttc aggttcttgt tcccttagtg attctttagc
     1681 ttcaacttca ggcataaatt gctggtaatt gtagaaaaaa gtgccatcgc tgcctttttc
     1741 ccaaagtccg gcgtagttgt attttacata ttcaggatca gcgtggcata tcatccctaa
     1801 ttgaggggtg gcatatgttc gtatttacca aggtgaggct tatggttggt gtgctgaaaa
     1861 aggagaggca aatacagaat gccctgaggc cttattggtg agtttaaccg gcgatatttt
     1921 tgaagcagtc ggcggagata agctgaaagg tgccaaaaaa tggcagcctt acaagaaaga
     1981 atgacagatg gatacgacac aaaaacgtgt ggctttattc atcattggat tatctgttgt
     2041 gatgtggcta agaaagcata actgctgtac agtgatattt gtattgttgt tggcagcgtt
     2101 agcatttagc tacacgatgg aacatttata ttagctgggg aactgaatta tggtaaagaa
     2161 tgtggttcat gaagagatat tacataaccg tgcagaatta cagcaagcgg ttgaaaaaga
     2221 agaattttgt gcaaaatgtg ataactcagt agtattccat ttacgtgata attatcacga
     2281 atttacgctt gggttagata ctatattgca gtgtctgcat tttgctgaag agaagggagc
     2341 tatccggata ccttgaatat tgagtattca ctcaatcatt gccaaggaga tggagtcgca
     2401 ttttatggtc gacttggtac agatgatcta atccagcttt tcaatcatct caatccacag
     2461 aaacgtaaac agaaaatgtt tgctaatttg ctaacgcaca ttgagtcttg ggaaacccac
     2521 gatgatattg gttttgaaat tatacgaaat cgctttgggt atcgttactc gcattggaat
     2581 acgatggagc tttatgctaa aactgcagat cagttagtgt ttttcaatga tagtgatgct
     2641 cgaagaaact ggtattttcc gacttcaaaa gtgtataaat acaaaggctt gtgggatgag
     2701 tttattcagg atttagaaca gtatattaag ggtacttccc gtgaaatgga atcggtcggt
     2761 tatcaaatta ttgaagcctc gccgtatcaa acggaaaccg ttttcaaatt taatacggaa
     2821 aactatctag tagaactgaa acgtaaacct tctgagtttt attcagagct tgttgattgg
     2881 gcatttggtg atatgtgtga ttttgaagca actatagagc agatttgtca agggcaactc
     2941 tgttatgctg attttgaagc aactgttacc gataagaaaa gtgaaattca gttaggtctt
     3001 gctcgcttga gtggaataag ttactcgccg aatgaccgtt cgtttagtgg ttatcgacaa
     3061 gagcttattg gtgaggcgat tgcctctgct cgccataatg cagcacgttt tgcctacttg
     3121 cacgcctaat ttgcagattt gtacttcaat ttgaccgctt gtagtggtta attttcaccc
     3181 cgtggggaaa tattttccct attgggcaag atgtttctcc actttttaat ttggagaaat
     3241 gtgatgaaaa atgaacacaa tttagagcaa cttaaatata tttgggataa ccgcaacctt
     3301 gaaaataaag cctatcaata cctgtttcac atttgcattg agccgatgaa aaaaggagat
     3361 tggaatcgtt atacgatttg gcttaatttt cacggcaact taatcaacgt gtcagacgtt
     3421 gtatatcgag ttgtggaatc tcaaaagctc aaggatgaca tcaaaatgtg gtatgacaat
     3481 aataccattg tcgtccgata aaagttgaaa caacaggctt catctcatat ttactgcacc
     3541 agttctatca ggggatagcc tatattttac tggaacaggg aatgattact gaaactgaag
     3601 cagccgagaa aagttataac ttcagagctg caaattgttt tcaacgtttg ctttaatgga
     3661 ggtgagataa tggaaactcg cattgttaaa gttatttacg atgatggtga ttatttcttt
     3721 acccgaatca atgctgatga acaggctatc cgtaattact acgccatagg cagttcaata
     3781 ggttttgatg atataagaaa aattatcgct gttgaaattt tataaaccac ccatagggga
     3841 aactatttcc ccatagggtg atagcgtttc cccatttttc tacccgaact ttggagaaac
     3901 acttatgaac actcaaccta aatttgattt ataccaacac atcactgacc gaattgttgt
     3961 agcactggaa caaggtacag ccccgtggtt aaaaccgtgg agccatccgg aatgcaatat
     4021 ggcattacct cgcaatgcgg tatctaaccg cttgtattcc ggtatcaata cactcttact
     4081 ctggattgct actgctgaac atggttacaa acagtgcaag tggattacag caaaaaaagc
     4141 caatgaactc ggcggatata tccgtaaagg ggaaaaagct actgtggtga tgaactaccg
     4201 tcctgatgag agagagaaac tcgatgagga agggaatatt gtgtatgacg aggaaggaaa
     4261 tccggaaatg gaacgacact ttttcattaa taagcacaat ctgttcaatc tggaccagtg
     4321 tgaaaattta ccggtggaac tgtacgatcc tgtatcagaa ccgaaacaac ctaaatctga
     4381 gccaaaccaa tacgatattt ttgctgagat tcggcagatt atcaaaggaa tggatttgca
     4441 ggtggaaatg aagcctagca atcgggcatt ttatcaacca ggtgaagata aggtcgtaat
     4501 gccggagatg aagcagtttg caaatgctca agcgtttcat agtgtattgt tacacgaaat
     4561 gactcacgca acgggggcaa ataatcggct taatcgggaa ggtattactt ccggaaaggc
     4621 taaatttgga aacaaagtct atgcttttga ggagttgatt gctgaaatgg gcggtgcatt
     4681 tttatgtgcc taccttggtt ttgatactgt gcctcaaaat gcggcgtata ttgaaagttg
     4741 gattcgagta ttgaaagaag ataaacgggc gattgtccgt gcttccggaa aagctcgtga
     4801 agcctgccaa tacatgttag acgcattaaa cgtcgcacag ttggctgaca aatacgatgt
     4861 atttgaagaa gctgcttaac aaatttgccg aaaggcatat ctcaagggga gacctatccc
     4921 tttgggcata gtgtttccct attttttatt aaatggagaa aagctatgac aaaatcaact
     4981 gaaatacctc gtggacatga taactgggtt attacaggca gagacaatga tgggaaatgg
     5041 cataaagaac gttttcttta ttattctcgc cgtgaagcca tccaacagtt tcgtcgaaaa
     5101 cacaactgcg taggtaaaca tagtgttatt gaatcaataa cacctcaatt tggctggtat
     5161 taaccggctt tcccgtgggg agatactctc ccttcggagc attgtgtctc cctttttatt
     5221 cacttaacta gaggacacaa tgttcaatct aaacttattt aaacgcccta ttgagctttc
     5281 aacgcttgaa tcttggtcta aattctgtga tgatgtcggt aaagttgcat ttattgcgat
     5341 acctccgatg atttatagta attatgatct atgtatcaaa ataggaaaca taagtgcttt
     5401 attggcaatt acctatggat tcttattatc aggcaggact atccgtcaat ttattgagaa
     5461 ggagaaatca agatgggatt aacaatcggc ttatggatca ttgcttttat aggctttgca
     5521 ctggtttttt gggcaaatag cttactcaaa gagcaagatg aacgccttaa acagctaaaa
     5581 aaatagctca actttacact caatacggca catttggtgc cgtatttcat tcttatccta
     5641 attaaaaatt agaattatat ttttcccatt tttcagcccc acttatatca tcacctccag
     5701 ttgcctcaaa aatttcatta gataagctga caattaaggc ggtagggcat tccgtgtttg
     5761 catcttcttg ctctgcacac cagccatagg cttttccctg ataaatacga acataaccac
     5821 gctctagcat aaaagggtga gaatccttgt gattttgacg aaatttttga gcaatagaca
     5881 aaatt
//
LOCUS       DANLTI010000142         5877 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.143, whole genome shotgun sequence.
ACCESSION   DANLTI010000142 DANLTI010000000
VERSION     DANLTI010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5877
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.143"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            13..1830
                     /locus_tag="PXB09_002352"
     CDS             13..1830
                     /locus_tag="PXB09_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme anaerobic degradation radical SAM
                     methyltransferase ChuW/HutW"
                     /protein_id="HDL5234415.1"
                     /translation="MIIKDTHWTSQQASPNAFPERQALMPIWGGKNIERNQWQSLWLE
                     QAPNALLQDGLAYFHIPFCASHCIFCGFYRNAWKENYSQIYTDRVISELRYESSLWRG
                     QGKIHAVYFGGGTPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKAC
                     IEAGVNRISIGIQTFNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQT
                     DDIWQNDIEIATSLPISGLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAV
                     EKLKAQGWQQVSNNHFAFPNRGERNRYNTLVKSNMPCLAFGSGAGGNFGGLSYQVQSD
                     LKTYLDSPLDQKSLSFLSKHGEHKALLGVIQHSMELGYLDTTPFEQNAKAEKLLQQWE
                     ALDLLKREKNQVYLNTSGRYWSPTLIRKLMLTLPQSSKDNNMITPLTKELENKLRTNL
                     KENPGQILEMLAGMNQCSLESVINCLPKEMVMQTGGERFVEIMQAIAGWNEAVTFIIH
                     TPDAIAEVTAKLPQGKIGRGFYNFEHGVDGGIHGHLRYENCAAIYLLDRPFMGKRTVA
                     LTFINQSGEAMFKIFVGRDEQGQLRENQIQAMRKLIGGC"
     gene            1833..2450
                     /locus_tag="PXB09_002353"
     CDS             1833..2450
                     /locus_tag="PXB09_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5234416.1"
                     /translation="MILVCGANGLLGRAICDKLPREKTIAVLRKDAMDTFFSERNIAV
                     EIADLLDLESCNALLQKTQPEILITVVGGKNEQGIRSDKTANINLIKAVEKYSPTTKV
                     VLVTSVGCAEQWDLISPLAQQALGEALKAKTEAEAYLQQTALNWLIIRPGGLNNDEVN
                     DEYQIVRDLPNERKMYVSRKSVATGIVRLLDSTENHQIFSIINRG"
     gene            complement(2534..3145)
                     /locus_tag="PXB09_002354"
     CDS             complement(2534..3145)
                     /locus_tag="PXB09_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentahemic C cytochrome"
                     /protein_id="HDL5234417.1"
                     /translation="MKSLSKIAFCFLAFIMPTFCFAGSNSYTTETIPLFADENLTQKI
                     GQLEAGAEIKLVQTTAKAAEIELNLWRKSKGFGRIWYHSFSKNITDAVFEKSFISNNP
                     LLEIVESKEDPNTGLVWQKVKMNVWVENAEFTQDLTNFWANTKNTYKTECSVCHKQRD
                     PKMHDANEWIAVFNGMVGFTDMDEATQKKVLRYLQMNAASSSQ"
     gene            3340..4248
                     /gene="glyQ"
                     /locus_tag="PXB09_002355"
     CDS             3340..4248
                     /gene="glyQ"
                     /locus_tag="PXB09_002355"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDL5234418.1"
                     /translation="MSTKFNVKTFQGMILALQDYWASKGCTIVQPFDLEVGAGTSHPM
                     TCLRALGPEPMAFAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDS
                     LKMLGFDPTQNDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPV
                     TGEITYGLERLAMYIQGVDSVYDLVWSDGELGKTTYGDVFHQNEVEQSTYNFEYADVD
                     FLFQCFEQYEKEAQYLLGLEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILR
                     IRALTKGVAEAYYASREALGFPGCKK"
     gene            4328..4588
                     /locus_tag="PXB09_002356"
     CDS             4328..4588
                     /locus_tag="PXB09_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234419.1"
                     /translation="MKPILYFADWCPDTAPFVAELDRLGIEYEPCDITKGGSTLKPFL
                     KLRDTHSAFDHAKANGYIGIPALLIEGEKVVLDLAELEGIFG"
     gene            4631..5665
                     /locus_tag="PXB09_002357"
     CDS             4631..5665
                     /locus_tag="PXB09_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5234420.1"
                     /translation="MKTVIADNSAEFVNEISQLIQSSKQRMTVAVNAELTLLYWHIGK
                     RINDYILQGERAEYGQEVVKNLAQSLTEQFGKGWSKRHLNYTMQFATTFPNLEIVHAL
                     RAQLSWTHFKQIIHIDDPTKRGFYATMAAQERWSTRTLEDRIGSLLFERTAISKKPDE
                     TIIAELSLLREKGEYNQSMVLKDPYILDFLDLNDRYMERDLEDAILREIEQFLLELGA
                     GFTFVARQKRIQIDNDDFYIDLLFYNRKLKRLIAIELKTESFKHSHKSQMELYLAWLA
                     KYEQEADENPPLGMILCTGKKQEQVELLDLKNSDIHIAEYMTVLPSKAVLEQRLHLAV
                     ERAKERFLLK"
BASE COUNT         1806 a         1110 c         1303 g         1658 t
ORIGIN      
        1 tttgtttcga taatgattat aaaagataca cactggacat ctcaacaagc ctctccaaat
       61 gctttcccag aacgacaggc acttatgcct atttggggtg ggaaaaatat tgaacgcaat
      121 caatggcaat ctttatggct ggaacaagca ccaaatgcgt tattacagga tggtttagct
      181 tatttccata ttccgttttg cgctagtcat tgtatttttt gtggttttta tcgcaatgct
      241 tggaaggaaa attatagcca gatttatact gatcgtgtga ttagtgaact tcgatatgaa
      301 tcttcactat ggcgaggaca aggtaagatt catgccgttt attttggtgg aggaacgcca
      361 acagcgttac atacagaaga tttagtacga ttgattcgag cttgttatcg ttatttgcca
      421 ctcgctgaag actgtgaatt tactattgag ggtagaatta gccattttga tatagataag
      481 gctaaggctt gtattgaagc aggcgtgaac cgtatttcta ttggtattca gacttttaac
      541 tccgaaattc gcaaacgttt agggcgcaaa catagtggcg aagaggctca aacttattta
      601 aaagccttat cggaattaaa tgctgtgatt gttgctgatt taatttttgg cttgccaaac
      661 caaacagatg atatctggca aaacgatatt gaaattgcga ctagtttacc gatctcaggc
      721 ttagatattt acgcctttaa taattatcct ttcctgccta ttaatcgctt aattgaacat
      781 ggaaaattac ctgcgcccgc agggtttgac acccaaagct tacactatgc ttatgcagta
      841 gagaagttaa aagcacaagg ttggcagcaa gtgagcaata accactttgc ttttccaaat
      901 cgaggtgaac gcaatcgcta taatactttg gttaaatcga atatgccttg tttggcattt
      961 ggctccggtg cggggggaaa ttttggtggg ctgagttacc aagtacaatc tgatttaaag
     1021 acctacttag attcgcctct tgatcagaaa agcctttctt ttttgagtaa acatggtgaa
     1081 cataaagcac tgcttggtgt gatacaacat agcatggaat tgggttactt agatacaacg
     1141 ccttttgaac aaaatgcgaa agctgaaaaa ttattgcaac aatgggaagc gcttgattta
     1201 ctgaagcgtg aaaaaaatca agtatatctc aataccagtg gtcgttactg gtcaccaaca
     1261 ttaattcgta aactaatgtt aacacttcct caatcaagta aggataacaa catgataacg
     1321 ccattaacta aagaattaga aaataaattg cggacaaatt taaaagaaaa cccagggcaa
     1381 attttagaaa tgctggcagg aatgaatcaa tgtagcttgg aatcggtaat taactgtctg
     1441 cccaaagaaa tggtaatgca aacaggtggt gagcgttttg tggaaattat gcaggcaatt
     1501 gctggttgga atgaagctgt gacttttatt attcatacgc ctgatgcgat tgcagaggta
     1561 actgctaaat tgccacaagg taaaattggg cgaggttttt ataattttga acatggtgta
     1621 gatggaggaa ttcacggtca tttacgctat gaaaattgtg ctgctattta cttacttgat
     1681 cgcccattta tgggaaaaag aacggtggcg ttaactttta tcaatcaaag cggtgaggcg
     1741 atgtttaaga tttttgttgg gcgtgatgaa caaggtcaat tacgagaaaa tcagattcaa
     1801 gccatgcgga aattaattgg aggatgctag tcatgatttt ggtttgtggg gcaaatgggt
     1861 tgttaggacg agcaatctgt gacaaattac ctagagagaa aacgatagcc gtcttacgaa
     1921 aagatgctat ggatacgttt ttcagcgaac gaaatatagc agtagaaata gcagatttat
     1981 tagatttgga atcctgcaac gccttgttac aaaaaacaca accggaaatc ttgattacgg
     2041 tagtaggagg aaaaaatgaa caaggtattc gtagcgacaa aacagcaaat attaatttga
     2101 taaaagcagt tgaaaaatat tcaccaacta cgaaagtagt tttagttact agtgttgggt
     2161 gtgcagaaca atgggattta attagcccat tagcacagca agctttaggt gaagcactaa
     2221 aagccaagac ggaagctgaa gcttatttac agcaaacagc attaaattgg ctgattattc
     2281 gacccggtgg gttaaataat gatgaagtaa atgatgagta tcagattgtg cgtgatttac
     2341 ctaatgaacg gaaaatgtat gtaagccgta aatctgtcgc aacaggcata gtgcgtttac
     2401 tggatagtac ggaaaatcat caaatcttct ctattattaa taggggatag tatatttcaa
     2461 cgaaggcaag cgggcatatt ttatggttat tttgcaacta taaaacagac cgcttgtgag
     2521 atctttttct attttattga gaactggatg ccgcattcat ctgcaagtag cgaagcacct
     2581 ttttctgggt agcttcgtcc atatcggtaa aaccgaccat tccgttaaat actgcaatcc
     2641 attcgtttgc atcatgcatt ttaggatcac gttgtttatg gcacacgctg cattctgttt
     2701 tataggtatt tttggtgttc gcccaaaagt tagtgagatc ttgggtaaat tcggcatttt
     2761 ccacccacac gttcattttc actttttgcc ataccaagcc ggtgttcgga tcttccttgc
     2821 tctctacaat ctctaacagt gggttgttgc tgataaaaga tttctcaaat accgcatcgg
     2881 taatattttt actgaaagaa tgataccaaa tccgcccgaa acctttgctt tttcgccata
     2941 aattcagctc aatttcagcg gcttttgcgg ttgtttgcac caatttaatt tctgctccgg
     3001 cttctagctg cccgattttc tgtgtcaaat tttcatcggc aaataaaggg attgtttccg
     3061 tggtgtaact gtttgaaccg gcaaaacaaa atgttggcat gatgaatgcc aagaaacaga
     3121 aagcgatttt cgataatgat ttcatcataa accccacaaa ttagatgaga aattaggtta
     3181 tatgttacac aaattgagca aaaaagcgtt gatttacatc ataaaactga ttttatgtcg
     3241 atttcttaat tttttgcaaa aaaatcccaa aaaatgactg cttacaagct ataataacca
     3301 gtatttttcg accatttttc aaattcaaga gaaaataaaa tgagtacaaa attcaacgta
     3361 aaaacctttc aaggaatgat tttagccctg caagactact gggcaagcaa aggttgcacc
     3421 attgtgcagc cgttcgattt agaagtgggg gcaggcacct cgcacccaat gacctgcctg
     3481 cgtgcgcttg gccctgagcc aatggcgttt gcctatgtgc aaccatctcg ccgcccgaca
     3541 gacggtcgct acggcgaaaa tccgaaccgt ttacagcact actaccagtt ccaagtggtg
     3601 attaaacctt cgccggataa cattcaagaa ctttacctcg acagcctgaa aatgctcggt
     3661 ttcgacccaa cccaaaacga cattcgtttt gtggaagaca actgggaaaa cccaacgctt
     3721 ggggcgtggg gcttaggttg ggaagtgtgg ctgaacggaa tggaagtgac ccaattcacc
     3781 tacttccagc aagtcggcgg cttggaatgt aaaccggtga caggcgaaat cacctacggc
     3841 ttagagcgtt tggcgatgta cattcaaggc gtggacagcg tgtacgacct cgtgtggtct
     3901 gacggcgaac tcggtaaaac cacctacggc gacgtattcc accaaaacga agtggagcaa
     3961 tccacctaca actttgaata cgctgatgtg gacttcctgt tccaatgctt cgagcagtac
     4021 gaaaaagaag cccaatacct gttaggccta gaaaaaccat tgccattgcc ggcatacgaa
     4081 cgcattttaa aagccgctca cagctttaac ttattagatg ctcgtaaagc gatctcggta
     4141 actgaacgcc aacgctacat tctacgcatt cgtgccttaa ccaaaggcgt tgctgaagcg
     4201 tactatgcca gccgtgaagc gttggggttc ccggggtgta aaaaataatc gtagggacgc
     4261 cacgcttggc gtccgtcaat aaattacaaa acggacacga agcatcgtgt ccctacaagg
     4321 atttacgatg aaaccgattt tatacttcgc cgattggtgt ccggataccg ccccatttgt
     4381 ggcagaacta gaccgcttgg gcattgaata tgagccgtgc gacatcacca aaggaggctc
     4441 aacacttaaa ccatttttga aactgcgaga cacgcattct gcctttgacc acgccaaagc
     4501 caacggctat attggcattc cggcattgct gatcgaaggc gaaaaagtcg tgctggattt
     4561 ggctgaatta gagggtattt tcggctaaca agcggttgaa tttggcggaa atgttgcaaa
     4621 ggagccaata atgaagacag taatagcaga taattcggct gaatttgtga atgaaatttc
     4681 acaacttatt caatcgagta agcaacgaat gaccgttgcg gttaatgcag aattaacctt
     4741 gctttattgg catatcggaa aacggatcaa tgactatatt ttgcagggtg aacgtgcgga
     4801 atatgggcaa gaagtggtga aaaatcttgc tcaaagtctg acggagcaat ttggtaaagg
     4861 ttggagtaaa cgccatttaa attatacaat gcaatttgct acaactttcc ctaatttgga
     4921 aattgtgcac gcactgcgtg cacaattaag ctggacacat tttaagcaga ttattcatat
     4981 tgatgatcca acaaagcgag ggttctatgc aacaatggct gcacaggagc gttggagtac
     5041 aaggacatta gaagatcgca ttggctcatt attgtttgaa cgcacggcaa tttccaaaaa
     5101 gcccgatgaa accattattg ctgaattgag tttgctacgt gaaaaaggcg aatataatca
     5161 gtcaatggtg ttgaaagatc cctatatttt ggattttctc gaccttaacg accgttatat
     5221 ggaacgtgat ctcgaagatg cgattctacg agagatcgaa cagtttttac tggaacttgg
     5281 ggcgggtttt acctttgtcg cccgccaaaa aaggattcag attgataatg atgatttcta
     5341 tatcgatctg ctgttttata accgtaaact caaacgcctg attgcgattg aactaaaaac
     5401 cgaaagcttc aaacattccc acaaaagtca aatggaactc tatttggcgt ggctggcgaa
     5461 atacgagcaa gaagcagacg aaaacccacc gcttggaatg attctctgca ccggtaaaaa
     5521 gcaggagcaa gtggaattgt tggatttgaa aaattccgat attcatattg cggaatatat
     5581 gaccgtgttg ccgagtaaag cggtattgga acaacggttg catttggcgg tggaaagggc
     5641 gaaagagcgg tttttactaa aatagcaagc ggttaaaatc agcggaaatg ttgcaaaatg
     5701 aaagtatgat ggaaacgatt tggttgcata ttccgttggt gggtggttag agattttcaa
     5761 atctcccccc tccccctctt tggctaaaga gggggcgatc atttagtgag taattttaat
     5821 tcatctgact atttacaatc ttaatgaaga aagatgaatt ataaatttac gaagatc
//
LOCUS       DANLTI010000143         5790 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.144, whole genome shotgun sequence.
ACCESSION   DANLTI010000143 DANLTI010000000
VERSION     DANLTI010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5790
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.144"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            563..832
                     /locus_tag="PXB09_002358"
     CDS             563..832
                     /locus_tag="PXB09_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234421.1"
                     /translation="MKNKNFEIAKVVILNEQLGSPKDLELKVVENSLSDEDRYDIKQA
                     VLKAVGNGCSDPEMLASRCCSAIEIINRNGLNTGNGSISTSSNSV"
     gene            complement(810..1082)
                     /locus_tag="PXB09_002359"
     CDS             complement(810..1082)
                     /locus_tag="PXB09_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas2"
                     /protein_id="HDL5234422.1"
                     /translation="MRNYLISYDLYKAGQNYDGLISYIKSHQVWAAIHKSVWYIKSNK
                     SAEQIRNELLIYLDKNDSVFVTDMNSAAWNNLTEGNGEYIRQNWMR"
     gene            1363..1438
                     /locus_tag="PXB09_002360"
     tRNA            1363..1438
                     /locus_tag="PXB09_002360"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1396..1398,aa:Arg,seq:tct)
     gene            1750..2256
                     /locus_tag="PXB09_002361"
     CDS             1750..2256
                     /locus_tag="PXB09_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234423.1"
                     /translation="MEAKYNMIIELAQQQGLTHIQLTQKHCLHLAASVGKLCSGVVNN
                     AKQKIKTATGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELYGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2260..2619
                     /locus_tag="PXB09_002362"
     CDS             2260..2619
                     /locus_tag="PXB09_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234424.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            2616..3095
                     /locus_tag="PXB09_002363"
     CDS             2616..3095
                     /locus_tag="PXB09_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234425.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKALNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFTPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNALAEMVKRTQEANNPKHA"
     gene            3229..3441
                     /locus_tag="PXB09_002364"
     CDS             3229..3441
                     /locus_tag="PXB09_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234426.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFLLVEEKIIDVLENNGFETVAT
                     ILAGSDGWCNAINAYLAEQNKHRNEF"
     gene            3454..4377
                     /locus_tag="PXB09_002365"
     CDS             3454..4377
                     /locus_tag="PXB09_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDL5234427.1"
                     /translation="MTNQNQQVAQKQDKFPIKTLFESPNVKQKLQELLNKNAATFTTS
                     VLQIVNSNSMLRNAEPMSVFNAACMAATLNLALQNGLGFAYIVPYQNRKEKKTEAQFQ
                     LGYKGLIQLAQRSGQFKRLVAVPVYEKQLLAEDPINGYEFDWKQKPAKDEKPIGYYAY
                     FKLINEFTAEIYMTTQEVHDHANRYSQTYRKGYGVWHDNFEAMALKTVMKLLLSKQAP
                     LSVEMQQAVLADQAVVKDVENAEFAYPDNEIQEAEFTELKVSDEVFEKCKQTIINKES
                     TLQDMCDNGYEFNKEQYAELEKLENEQQSNV"
     gene            4370..5032
                     /locus_tag="PXB09_002366"
     CDS             4370..5032
                     /locus_tag="PXB09_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation protein TolB precursor"
                     /protein_id="HDL5234428.1"
                     /translation="MYKFKPRCSMLHQLMSEPRTKADREAGLISDTAKAAVREVAKFD
                     LFGYQSFDGNKYTEKGNQLEEQAIKLSGFTRGLVLKKNTERRENDWISGECDIYVPSR
                     KLIIDTKCSWDIGTHPFFADEAIAKAEKAGYDIQMQGYMWLWDCEEAQIDFVLFPTPI
                     DLIGTYESTEKLIDLVEQIPQQKRITTVTVKRDEAIIAKIKDRVKAASKYYDKLIQEA
                     MN"
     gene            5073..5774
                     /locus_tag="PXB09_002367"
     CDS             5073..5774
                     /locus_tag="PXB09_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDL5234429.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAITTFGTVFAGTLGGYIE
                     KESNLKHLGNAWVYDNAKVYDSAEVYGNAKVYDSAEVYGNAEVWGSAEVYGNAKVWGN
                     AEVWGSAEVYGNAEVWGSAKVWGNAEVWGSAEVYGNAKVYDSAEVWGSAKVRSFAVLS
                     ERKMIFWASNVGTENGTLTVYNGKDGLLVTRGCFTGTVEEFLAKSDEVHDEKTKREYQ
                     LLIEVAKSRILGEAT"
BASE COUNT         1995 a         1195 c         1205 g         1395 t
ORIGIN      
        1 accgccagga gggcggtttt ctcttgccta aaatctgcaa aattctcttc aaaaacgacc
       61 gcttgcaact caatctgttt atttattaag caatcaaaca acctttctaa aaataaattc
      121 cttttaaaat caacaaatta cctttttgtt atttattttt accttattta acataccttt
      181 tggtatttac aacaatattt accataaggt ataatgcacc catcaaaacg agctacggct
      241 caatgctctt taaaaatcaa attcaaaacc gctttaagcc taatggtgaa aagtaggaag
      301 acgaaagtcg gaggcagccc ttaaaacgcc cactacttca aagcgttatg ccctttggtg
      361 caagcaaagg aatacaagca tataccctta tagcggttta ggtgaaagtc tgggcgtgta
      421 cattgagaca caagggagta accgaaattc aaattgtgca aacgcagctc taaaattgcg
      481 tgacagctcg gagagacggc atttcaaatt ccaaagcata tttgagaaag tgtgttttgg
      541 aatatttaac tagaggtaaa ttatgaaaaa caaaaatttt gaaattgcga aagttgttat
      601 tttaaatgaa caactaggaa gccctaaaga tttggaatta aaagtagtag agaatagcct
      661 atctgatgaa gatagatacg acatcaaaca ggcggtactt aaggctgtag ggaatggttg
      721 ttcagatcca gaaatgcttg catcacgatg ttgttccgca atcgaaataa ttaatagaaa
      781 tgggctaaac actggtaatg ggagtatatc tacctcatcc aattctgtct aatgtattca
      841 ccatttcctt cagtcagatt attccaagca gcactattca tatccgtaac aaagacacta
      901 tcgttcttat ctaaataaat gagcagttca ttacgaattt gttctgcaga tttattagat
      961 ttgatatacc aaactgattt atgaatagca gcccaaactt gatggctttt aatataacta
     1021 atcaatccat cgtaattttg cccagctttg tataaatcgt aagaaattaa atagtttctc
     1081 atagaagaat ccttatttgt gctgtgagag atttaattat attccttagt gttgtgagag
     1141 acaataagga aacttgacgg ctcacaagta taaaagagcc accatctcaa accgctctca
     1201 acaaagagtt agcccgataa cctcacttgg ttttttgcgt atgttttccc aaagtgccgt
     1261 tatccagcga aacgaatgga ctagagagcg gtttgagatg gtgaaagcca tcctccttag
     1321 attgaagtaa accctgccgt tggggttaag caacggtact ttgaccgcat agttcagtgg
     1381 atagagcagc tgccttctaa gcagtgggtc gagagttcga atctctctgc ggtcgccatc
     1441 caaaaccgct ttgcgcacat catcgatgac gagcctacga agtggaaacc taccgtgtag
     1501 agcggttttg aatggctaat aaaacaatgt gaggtatcaa atgcttatta agttaaaaag
     1561 ccctgaacaa gcagggcaag aagaaatctg ggaagttagc gatgattgga ttgctcctca
     1621 agaattaaat ccgccatcag aaacatctcc ttaatataac gcctgtagag ttgctcaagg
     1681 ttaagtaatt actgcggagg ggctttttac acccaaaatt cagatttttg actaaaaaag
     1741 gaacgaaaaa tggaagctaa atacaacatg attattgagc tggcacaaca acaaggctta
     1801 acccatattc aacttactca aaaacactgt cttcatcttg ctgcatcagt ggggaaacta
     1861 tgttctggag tcgttaataa tgcgaaacag aagattaaaa cggctacggg agaaattttt
     1921 acattactca ccatcattaa ccatcaaatc cagttcgatg aagacttaga gcttcacacg
     1981 tggaaagcta gtggaacaac cccacccgag caaagagcga tacgtatgtt acatcatacc
     2041 tcgcaatttg cttggtttgc tccttggtta gtggacagca atgaaaaaga acaaaaccaa
     2101 aatacaatca ggattaattt atttaacaaa tgctctggga ttctgattga actatatggc
     2161 attcttaaag aatacgagct aactcttgat gagtgcttag atgaattctt gaaaaataag
     2221 cattgtttga atgaatttag tattcacaag gagtaaaaaa tgacgacgtt tagtatttat
     2281 accagtgtat ggcacgacag ctccacgaaa ggctttcgcc acaacattaa gcataaacgc
     2341 cacgattgct ggagagcgga tatccgcata aagcaaaaaa tcaatgatgt gtgggtgcag
     2401 atttcaagaa tacgcaaacg cttcaagtgc cctgaacagg caaaatcctt tgtagaacaa
     2461 tggaaacaaa ttgattcccc tgcatttatg caacaccaaa tcaaccgcca agcattaaga
     2521 gaagaattat caaaccttga gcaacgcaaa cagaagcaag acggaatact tgaggtgatt
     2581 gagtatcgta ttagccaaat caaggagtta ctgaaatgaa acgcaataaa gtagaaagct
     2641 atactatccg cttattaaaa aataatcata caaaacgcta cttcggagaa gttatattaa
     2701 acggcataaa agaaatcagc acggcagaga tgatgtctga aattaacgct attaaggcat
     2761 taaataagcg tattgaagct ctgaataaaa ccaaagccgt taatttgcct aattatcctg
     2821 aaatcagagg tcatcagcct attatgtaca attacaattt tgaacaaatt gaggaagatc
     2881 ctgaacaggt taagcctaaa ccatcaaaac caaaacgcaa acctttcaca ccctacgggc
     2941 taaacggcta ctttgtggat agcaacggca atattcgcct gcacctagac agacgagcaa
     3001 gtgccgaaac aattaccctt gaaactgatt tcttcaacgc tcttgccgaa atggtaaaac
     3061 gtacacaaga ggcaaacaat cctaaacatg cttagacaat ggattacata cggcttatac
     3121 gccctgcttt ttatggttgc catcaccctc ctaatgcaat gaagagctta tccctgaaag
     3181 cacctgcaag cctgaaactt gcgaatttaa agtaacggag aaagtgtgat gataggatac
     3241 gaagactaca cagatgcttc acttcaacca gaagaagacc ctagcgaaga ggctttcctc
     3301 ttagtggagg agaaaattat agatgtgcta gaaaacaacg gctttgaaac cgttgctact
     3361 atcctagccg gttctgatgg ctggtgtaac gcaattaatg cctacctggc cgaacagaac
     3421 aaacacagaa atgaatttta gaggaataag ataatgacaa accaaaatca acaagtagca
     3481 caaaagcaag ataaattccc gattaaaacc ctatttgaaa gcccgaatgt aaagcaaaaa
     3541 ctacaagagc ttttaaacaa aaacgcagcc acgtttacaa caagcgtgtt gcagattgtg
     3601 aatagtaact caatgttacg caatgccgaa ccgatgagcg tattcaacgc cgcttgtatg
     3661 gcagcaacgc ttaatttggc attacaaaac ggcttaggtt ttgcctacat tgtgccgtac
     3721 caaaaccgca aagagaaaaa aaccgaagct caattccaac ttggctacaa aggtttaatt
     3781 caactggctc aacgtagcgg gcaatttaaa cgccttgttg ccgtgccggt gtatgaaaaa
     3841 caactgcttg ccgaagaccc catcaacggt tacgagttcg attggaaaca aaaaccggct
     3901 aaagatgaaa aaccgattgg ctattacgct tatttcaaac tgataaatga atttaccgcc
     3961 gaaatctata tgaccacgca agaagtccac gaccacgcca accgctacag ccaaacctac
     4021 cgcaaaggct acggcgtatg gcacgacaac tttgaggcaa tggctctcaa aactgtgatg
     4081 aagctcttgc tttccaaaca agctccatta tcagtggaaa tgcaacaagc ggtcttggca
     4141 gatcaagcgg tcgtaaaaga tgttgaaaat gcagaatttg cctaccctga caacgaaatc
     4201 caagaggcgg aatttaccga actcaaggtc agcgatgagg tgtttgagaa atgcaaacaa
     4261 accatcatca acaaagaaag caccttgcaa gatatgtgcg ataacggcta cgagttcaac
     4321 aaagagcaat atgcggagtt ggagaagtta gaaaatgaac agcaatcaaa tgtataaatt
     4381 caaaccccgt tgctcaatgc tccaccaact aatgagcgaa cctcgcacca aagccgaccg
     4441 tgaagccgga ctgatttccg acaccgcaaa agcagcggtg cgtgaagtgg ctaaatttga
     4501 cctattcggt tatcaatcct ttgacggcaa caaatacact gaaaaaggca atcagctaga
     4561 agaacaagcc attaagttaa gcggttttac tcgtggcctg gttctaaaaa agaacaccga
     4621 acgccgagaa aacgattgga tttcaggcga gtgtgatatt tatgtaccaa gccgaaagct
     4681 gattatcgat acaaaatgca gttgggacat cggcacgcac ccgttttttg cagacgaagc
     4741 catcgccaaa gccgaaaaag ccggatatga cattcaaatg caaggctata tgtggctgtg
     4801 ggattgcgaa gaggctcaaa tcgattttgt gttattccct actccaatcg accttatcgg
     4861 tacttacgaa agcacagaaa agctgattga ccttgtggaa caaatccccc aacaaaaacg
     4921 cattaccacc gtgacggtta agcgtgatga agccatcatt gccaaaatca aagacagagt
     4981 gaaagcagcc agtaagtatt acgacaagct tatacaagaa gctatgaatt aattcaatcg
     5041 ccccgaaagg ggctttttaa taggtgacaa atatgacaac ccaaaagaaa tacgaactcc
     5101 tccaaaacga cacaatcaac cacaacggca gaacactcta ccgcatcaaa gccataacca
     5161 catttggaac agtctttgca ggtacacttg gcggctatat tgaaaaagag agcaacctaa
     5221 aacatttagg aaatgcttgg gtgtatgaca acgccaaagt gtatgacagc gccgaagtgt
     5281 atggcaacgc caaagtgtat gacagcgccg aagtgtatgg caacgccgaa gtgtggggca
     5341 gcgccgaagt gtatggcaac gccaaagtgt ggggcaacgc cgaagtgtgg ggcagcgccg
     5401 aagtgtatgg caacgccgaa gtgtggggca gcgccaaagt gtggggcaac gccgaagtgt
     5461 ggggcagcgc cgaagtgtat ggcaacgcca aagtgtatga cagcgccgaa gtgtggggca
     5521 gcgccaaagt aagatcattt gcagttcttt ctgaaagaaa aatgattttc tgggcgagca
     5581 atgtcggcac agagaacggt acattaaccg tttacaacgg aaaagacgga ctgcttgtaa
     5641 caagaggctg tttcaccggc acagtcgaag agtttttagc aaaatccgac gaagttcacg
     5701 atgagaaaac gaagcgggaa tatcagctac tgattgaggt agcaaaaagc agaattttag
     5761 gagaagcgac ttaatcagtc tcttttttat
//
LOCUS       DANLTI010000144         5666 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.145, whole genome shotgun sequence.
ACCESSION   DANLTI010000144 DANLTI010000000
VERSION     DANLTI010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5666
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.145"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            22..834
                     /locus_tag="PXB09_002368"
     CDS             22..834
                     /locus_tag="PXB09_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5234430.1"
                     /translation="MGRPELERAVLSVQNQTYPCKHYVFVDGEKYHQQAADILKNFPS
                     VIVTYLPMNTGADGWVNSSINAIAPFLVKEDIICYLDDDNWFEPTHVESGVHALLEMQ
                     SDYAYSLRNFYDLDGEFLCIDTIESLGEYNCVYQEPLECNYQLGGVKGVLSINLNDCQ
                     HIDTNCYFIRSEIARLISTAWYTGIHNDRNVYKKLQELALKGNCTKKVTVNYTLDTRK
                     YYGSVFNELLEEPFLLSEYDAYQFTNEVIKFHSEESLKAWGGCLIWEQNNGS"
     gene            966..1664
                     /gene="aphA"
                     /locus_tag="PXB09_002369"
     CDS             966..1664
                     /gene="aphA"
                     /locus_tag="PXB09_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDL5234431.1"
                     /translation="MTAATMFASLIAFSAQAGGPKVAYTQPGIDMRTHEAQQAPIHWV
                     SIEQIKESIKDLPPMAVSFDIDDTVAATSGCFHYGKQKYSPDDFSYLKNQDFWDEINA
                     GCDKYSLPKQVAINLIKMHQERGDQVYLITGRTAGKNEQVTTIMQKYLGIKNMQPVNF
                     MGGKAHSTKYDKTPAIIEHKVQIHYGDSDDDILAAREAGIRGIRILRAANSNYTPFPQ
                     AGGYGEEVVVNSSY"
     gene            1845..2606
                     /gene="udp"
                     /locus_tag="PXB09_002370"
     CDS             1845..2606
                     /gene="udp"
                     /locus_tag="PXB09_002370"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDL5234432.1"
                     /translation="MSEVFHLGLTKAMLKGAKIAIVPGDPARSERIAKKMDNPEFLAS
                     TREFTSWLGYLDGEPVVVCSTGIGGPSVSICVEELAQLGVRTFLRIGTTGAIQEHINV
                     GDILITTGAVRLDGASQHFAPMEYPTVANFECTNALYAAAVESGVTPYVGITASSDTF
                     YPGQERYDTFTGKIYRHFQGSLKQWQDLNVMNFEMESATLFTMCSALGLRAGMVAGVI
                     VNRTQQEIPNEATIHDTEHKAVSVVVEAARKLIKG"
     gene            2681..3266
                     /locus_tag="PXB09_002371"
                     /pseudo
     CDS             2681..3266
                     /locus_tag="PXB09_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3277..3762
                     /locus_tag="PXB09_002372"
     CDS             3277..3762
                     /locus_tag="PXB09_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDL5234433.1"
                     /translation="MYSLYLKILSECDWCCDPKTLSTYQQEWLLHEGSLTQKLYDVAT
                     NFNVEVVQEKWIAKNSEKTTACNEDVWSREVLLKDGEKNWIFAQTLVPRSTIENIAQN
                     VLELGNQPIGLWLFSQNPTRTKLEWTQTENGLFARRGVYEIRGYSLEIRELFLETFPY
                     L"
     gene            complement(3800..4669)
                     /locus_tag="PXB09_002373"
     CDS             complement(3800..4669)
                     /locus_tag="PXB09_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5234434.1"
                     /translation="MKNINTQAVGWIGLGQMGEPMAKHLLNSGVNVGVYNRDPAKAEK
                     VVEAGGTLYPSVLELVKAYDVIFLMIADYAAVQQVLSDEVLAELNGKVVVNMSTISPS
                     QNQAVEALLAQHGAEFVEAPVSGSSKVAEAGKLLVLAAGKEETVELLKPLFAAFSTTT
                     FYYGEVGKAGGIKLMINSLLGIFIQAYGEALNFADQYGIPKEKVIEMISGSFMNSPIF
                     QAKVPMYQANEFPPAFMMKHMTKDFNLASEEIAKLGKSYPLIEQATKTYNQANDSGLS
                     EVDMAAIYQFLAK"
     gene            4799..5590
                     /locus_tag="PXB09_002374"
     CDS             4799..5590
                     /locus_tag="PXB09_002374"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDL5234435.1"
                     /translation="MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEK
                     SEAVLIERAVKIVQKIAEKQPLDMVVVACNTASTVVLPALREHFNFPIVGTVPAIKPA
                     AAISETKVIGLLATKGTVARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVD
                     MNRLQKVVEAWQGKPELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSL
                     LEERKFQQKADFENQAFCTKQSSAFNIKQDVMQNWGFNNLSVIDI"
BASE COUNT         1764 a          987 c         1181 g         1734 t
ORIGIN      
        1 gtagctgtta tcagttcaac aattggtcgt cctgaattag aaagagctgt tttaagcgta
       61 caaaatcaga cttatccttg taaacattat gtttttgttg atggagagaa atatcaccaa
      121 caagcggctg atattttaaa gaattttcca agtgttattg ttacttatct cccaatgaat
      181 accggggctg atggttgggt aaatagcagc attaatgcaa ttgcaccatt tttagtgaaa
      241 gaagatatta tttgttatct ggatgatgat aattggtttg aacctactca cgttgaatct
      301 ggtgtgcatg ctttattaga aatgcaatct gattatgctt actctttacg taatttttat
      361 gatttagatg gcgagttttt gtgtattgat acgattgaat cgttgggaga atataattgc
      421 gtttatcaag aaccattaga atgtaattat caattaggtg gtgttaaagg tgttttatca
      481 ataaatctga atgattgtca gcatattgat acgaattgct attttattcg tagtgagata
      541 gctcgcctta tcagtacggc ttggtacaca ggtattcata atgatagaaa tgtatataaa
      601 aaattacaag aattggcact aaaaggaaat tgtacaaaga aagttacggt taattatact
      661 cttgatacac gtaaatatta tggatcagta tttaatgaat tattagagga gccattttta
      721 ttaagcgaat atgatgccta tcaatttacg aatgaggtga ttaaatttca ttcagaagaa
      781 agccttaaag cttggggagg ttgcttgatt tgggaacaga acaatggctc ataagcgtta
      841 agcgtaatcg tttgcttgtg atcatattca caaaataagg tttttgtatt agctaagagt
      901 gcctaataag attaaaatag gtatggttaa tcatatggag gtattttata aaatttacat
      961 taaaaatgac ggcagcgaca atgtttgcat ctcttattgc tttttcagca caagcaggcg
     1021 gaccaaaagt agcttatacc cagccgggaa ttgatatgcg aacacatgaa gcacagcaag
     1081 cgccaattca ttgggtatct attgagcaaa ttaaagaaag catcaaagat ttacccccta
     1141 tggcggtaag ttttgatatt gatgatactg ttgctgcaac tagcggttgc ttccactacg
     1201 gaaagcaaaa atattcgcca gacgatttca gctacttaaa aaatcaagat ttttgggacg
     1261 aaattaatgc tggctgtgat aaatattctt tgccaaagca agttgctatt aatttaataa
     1321 aaatgcacca agaacgtggt gatcaagttt atttaattac ggggcgtacc gcaggtaaaa
     1381 atgaacaagt tacaacgatt atgcaaaagt atcttggtat taaaaatatg caaccggtaa
     1441 attttatggg ggggaaagca cattcaacaa aatatgataa aacccctgcg attattgaac
     1501 ataaggtgca aattcactat ggtgacagtg atgatgatat cttagctgcc cgtgaagccg
     1561 gtattcgagg tattcgtata cttcgtgcag caaattctaa ttatacgcca ttccctcagg
     1621 ccggaggata tggtgaagaa gttgttgtca attcaagtta ttaatttctt agtctgaaat
     1681 atggccacca ttgcgtggcc atcatttttt atttatataa tgacgaaacc gtttaccttt
     1741 gatctagttc acaaaatcaa actttgcttg caaaaaattg tcgtaaatta accgcttgct
     1801 aagatagaat ggctcatatc cagttagata aaaaggagat aaaaatgtct gaagtatttc
     1861 atttaggttt aaccaaagcc atgctcaaag gtgcaaaaat tgcaatcgtt ccgggcgatc
     1921 cggctagaag tgaacgtatt gccaaaaaaa tggacaaccc agagttttta gcctcaaccc
     1981 gtgaatttac ctcttggtta ggttatttag atggcgaacc ggtggtggtt tgttcaaccg
     2041 gtattggcgg accgtcggtg tcgatttgtg tggaagagtt agcacagtta ggtgttcgca
     2101 cattcttacg cattggcaca acaggtgcaa ttcaagagca tattaatgta ggcgatattt
     2161 taattaccac cggagcggtg cgtttagatg gtgcgagcca acattttgca ccaatggaat
     2221 atcctacagt agcgaatttt gaatgtacta atgctcttta tgcagcagca gtggaatcag
     2281 gcgttacacc ttatgtgggg attacagctt catcagacac tttctacccg gggcaagaac
     2341 gttacgacac tttcaccggc aagatctatc gtcatttcca aggttcatta aaacagtggc
     2401 aagatctcaa tgttatgaat tttgaaatgg aatccgccac tctctttacg atgtgttcgg
     2461 cattaggctt gcgagcaggt atggttgctg gtgtaattgt aaaccgcact caacaagaga
     2521 ttccgaatga agcaaccatt cacgacaccg aacataaagc cgtttcggta gtagtggaag
     2581 cggcaagaaa attaattaaa ggctaatctt taaatttaaa agcaaaaaag gtaaattgtc
     2641 tttgttacaa tttacctttt ttctttttag ggagctttct atgaaaaaat ggttgatgtt
     2701 aattacatta attttcggca ttaccgcttg tttttccagt ttagaatttg atgaaagtaa
     2761 acaagaaaaa atcaattcat tcttgattgt tggtaataaa ttatatgtgg tgggtgaact
     2821 gcacgattat gaatttgagc atcagcaagt tgcggaactg aataattttc tcaaaagcct
     2881 aattgctaat aaaatcaaat ctgttgaggc aaacttcgag gttaaggaat ccaaaaaagt
     2941 ggaaggtagt tatagaatta ttttagatgg gaaatcactt acagaaagtg aaagaagtac
     3001 ggtgatggtt taattcagct caaaatccat ctattactta tcaggcggaa gggaacttgg
     3061 tgaaattagc caatagagaa gagcttttgc aaaaattccg atttaaacaa gcgcttgagg
     3121 cgaatgtgcg ttattacaaa atgaaaagtg gtcttcaaaa tacggctgaa ggagcgttaa
     3181 gtattgtaat gttgcctgtt gctgtagtag ctgttttacc attctatatg ttttgggttg
     3241 gtgcttgtgc cacttacgga tgttaaataa ctttttatgt attctctata cctgaaaatt
     3301 ttatcggaat gcgattggtg ttgtgatcca aaaacacttt ctacctacca gcaagaatgg
     3361 cttctgcacg aagggtcact tacccaaaaa ttgtatgatg tcgcaaccaa tttcaacgtg
     3421 gaagtagtac aagaaaagtg gattgcaaaa aacagtgaaa aaacgaccgc ttgtaatgaa
     3481 gatgtttggt cgcgagaagt gttactgaaa gatggtgaaa aaaattggat ttttgcccaa
     3541 actcttgtgc caagatcaac aatcgaaaat atcgctcaaa acgtgttgga attgggcaat
     3601 cagccgattg gtttatggct attttctcaa aatcctactc gcaccaaatt agaatggaca
     3661 caaacagaga acggtttatt cgctcggcgt ggggtgtatg aaattagagg gtattctctg
     3721 gaaattcgag agcttttttt agaaaccttt ccttatttat aaaaaaatcg gttggtaatg
     3781 acaccaaccg attttcatct tattttgcca agaactgata aattgcagcc atatccactt
     3841 cgctcaagcc tgaatcattg gcttgattgt aggttttagt ggcttgctca ataagcgggt
     3901 aagatttgcc taatttcgca atttcttcgc ttgccaaatt aaaatctttg gtcatatgtt
     3961 tcatcataaa cgcaggcgga aattcattag cttggtacat cggcactttt gcttggaaga
     4021 tcgggctgtt cataaacgag cctgaaatca tttcgattac tttctctttc ggaatgccat
     4081 attggtcggc gaagtttaac gcctcgccat aggcttgaat gaagatgccc agtagcgagt
     4141 tgatcatcaa tttaatccca ccggctttac ccacttcacc ataatagaaa gtggtggtac
     4201 taaaggcagc gaaaagcggt ttgagcaact caacggtttc ttctttaccg gcagccagta
     4261 ccaatagttt acctgcttct gccactttgc ttgaaccgga aaccggagct tcaacaaatt
     4321 ctgcaccgtg ttgggctagt agagcttcta ccgcctggtt ttggcttggg gaaatggtgc
     4381 tcatattcac cactactttg ccgtttaatt cagccaacac ttcatcgctt aacacctgtt
     4441 gcacggcggc atagtctgca atcatcaaga aaatcacatc gtaggctttc accaattcca
     4501 acacagaagg atataatgtg ccgcctgctt caactacctt ttctgctttt gctgggtcgc
     4561 ggttgtaaac gcccacgttc actccgctat ttagcaaatg ttttgccatc ggttcgccca
     4621 tttgccctaa accaatccaa ccgactgctt gtgtattaat gtttttcatt atttttctcc
     4681 ttactgaata aagcaaattg attattgcga ttttccctca tcaagtcaaa tagagagaac
     4741 ttgaatatag caatggaaaa gagtagcatt ttagcactta cttttttgaa caataccaat
     4801 gaaaccaaca attcttttat acgattccgg aatgggcgga ttgacgattt acgatgaaat
     4861 ccgaaaagtg ttaccgcacg ctcactattt atattgcttt gataacgctt ttttcccata
     4921 ttccgagaag tcggaagcag ttttaattga gcgagcggtc aaaattgtgc aaaaaattgc
     4981 agaaaaacaa ccgcttgata tggttgttgt tgcttgtaat acggcaagca cagtggttct
     5041 gccggcattg cgtgagcatt ttaattttcc gatagtagga actgtaccgg caattaaacc
     5101 ggcagcggca atttccgaaa ctaaagtcat cggcttgctc gccactaaag gcacggttgc
     5161 tcgcccttat gttgatgaat tgataagaaa atatgctcag gattgtacgg tagaaaaaat
     5221 tggcacaacc gatttggttg aaattgttga agaaaaacaa cgaagcggta aagtggatat
     5281 gaaccgacta caaaaagtgg tcgaggcttg gcaaggtaag ccggaattgg atacggttat
     5341 actcggttgt acccattttc ccttagtcaa agctgaatta cagcaattat tgcccgatgt
     5401 gaaatatttt gttgatccgg gtgtaggtat tgccaaacgg gtgctaagcc ttttggaaga
     5461 acgcaaattt caacaaaaag ccgattttga aaatcaagca ttctgcacta aacaaagttc
     5521 tgcatttaat atcaaacaag acgttatgca gaattgggga tttaataatc tttcggtgat
     5581 tgatatttaa acaaaacaat ctgttttgat gaaaaaaggt tcagttgagc aaaaacttta
     5641 aaaaagggct tgcactcaat tttaaa
//
LOCUS       DANLTI010000145         5601 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.146, whole genome shotgun sequence.
ACCESSION   DANLTI010000145 DANLTI010000000
VERSION     DANLTI010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5601
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.146"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            28..357
                     /gene="trxA"
                     /locus_tag="PXB09_002375"
     CDS             28..357
                     /gene="trxA"
                     /locus_tag="PXB09_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDL5234436.1"
                     /translation="MSNVIHTTDATFEQDVLKSDVPVLLDFWAPWCGPCRMIGPVLDD
                     LSVDAQFDGKVKIVKMNVDENPSVPAQFGVRSIPFLLLFKNGEVIAQQVGAIPHAQMA
                     EFIKQAL"
     gene            528..1751
                     /gene="hflK"
                     /locus_tag="PXB09_002376"
     CDS             528..1751
                     /gene="hflK"
                     /locus_tag="PXB09_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDL5234437.1"
                     /translation="MSWNESGNQQDPWGKPGQKKAEPKPEQQEQGSQQEPTNNQRNEQ
                     QPPDLEEVFSSLLKKMGGGKGPNNSSNQPSASLGKFLPVVLGLAAVVWVGSGFYTVQE
                     AERGVVTRLGKLNDIVLPGLNWKPTFIDSVTRVNVERVSELNTSGSMLTQDENMVQVE
                     MTVQYRVEDPAKYLFSVSNPDDSLKQATDSALRYVIGHMTMDEILTTGRATVRERTWS
                     TLRDIIKTYDMGLLVTDVNFQYARPPEEVKAAFDDAIKAQEDEQRLIREAEAYARGEE
                     PIARGQAQRTIEQAQAYKEAVVLNAKGEVERLSQLLPEYKASPELTRERLYIQTMEKV
                     MKNTPKVVMDSSGNNLNVLPFDKLMNSSSVIKAEQPAAAQVVTPQVVQPQVQPRTQIQ
                     PQQAEQQEPTRKGRF"
     gene            1754..2641
                     /gene="hflC"
                     /locus_tag="PXB09_002377"
     CDS             1754..2641
                     /gene="hflC"
                     /locus_tag="PXB09_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDL5234438.1"
                     /translation="MRRLLVPILAVVAFVVLQAITIVNEGERGIMLRFNKVHRDSDQK
                     VVVYEPGIHFKVPFIDSLKVLDARIQTLDGQEDRFVTVEKKDLLVDSYVKWRISDFGQ
                     FYTSTGGDYQKAADLLRRKVGDRLRSEIGSRTIKDIVSGSRGELMAGAQKALNAGEDG
                     AERLGIEVVDVRVKQINLPNEVSSSIYQRMRAERDAVAREHRSQGNEKAEVIRAEVDK
                     KVVLILANANKTAQALRGEGDAQAAKLYSEKFGNEPEFYSFIRSLKAYEDSFAEGQNN
                     MMLLKPNSEFLRFMQAPTK"
     gene            2815..4113
                     /gene="purA"
                     /locus_tag="PXB09_002378"
     CDS             2815..4113
                     /gene="purA"
                     /locus_tag="PXB09_002378"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDL5234439.1"
                     /translation="MGKSVAILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTL
                     IINGEKTVLRLIPSGILRDNVTCLIGNGVVLSPEALMKEMGELEERGINVRERLKISE
                     ACPLILPYHVAMDHAREAALGKNKIGTTGRGIGPAYEDKVARRGLRVSDLFDKEHFAA
                     KLKDILDYYNFQLVNYYKVEAVDYQKTLDDVFAIADVITGMVADVTTLLHEARENGDN
                     ILFEGAQGTMLDIDHGTYPFVTSSNTTAGGVATGSGYGPRHLDYVLGIIKAYCTRVGS
                     GPFTTELFDDVGAEIARKGNEFGAVTGRPRRCGWFDAVAVRRAVQINSISGFCMTKLD
                     VLDGFKELKICVAYKMPNGKIVEYAPLAAKDWEGVEPIYETMPGWSENTFRVTKREDL
                     PQAALDYIKRIEELVGVPVDILSTGPDRVETMILRDPFAA"
     gene            complement(4273..4343)
                     /locus_tag="PXB09_002379"
     tRNA            complement(4273..4343)
                     /locus_tag="PXB09_002379"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4313..4315),aa:Arg,seq:tct)
     gene            complement(4492..4785)
                     /locus_tag="PXB09_002380"
     CDS             complement(4492..4785)
                     /locus_tag="PXB09_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234440.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKEITDAPLTKEDIGKTPTQIMLGRIYKYLKETGQIVV"
     gene            4929..5318
                     /locus_tag="PXB09_002381"
     CDS             4929..5318
                     /locus_tag="PXB09_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5234441.1"
                     /translation="MADPIEWSIITTDCFDEWFGQQDESTQERVLACLIYLRKFGYSL
                     GRPYADTVYQSKFPNMKELRIQNKGKPIRAFYAFDPLRQAIVLCAGEKGKDKRFYEKM
                     IALADAEFTSYLNNLEKENENVRSNAQ"
     gene            5290..5589
                     /locus_tag="PXB09_002382"
     CDS             5290..5589
                     /locus_tag="PXB09_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5234442.1"
                     /translation="MKTLDQMLNELSPERRQKVEDMAQEMIREIQLSKLREELNLSQQ
                     QLATALGISQPAIAKLEQKDNDPRLSTLKRYIEAMGGKLKLAVELPTGDERVIRI"
BASE COUNT         1746 a          997 c         1254 g         1604 t
ORIGIN      
        1 ttttatttaa tatttaagga taaacttatg agcaatgtca ttcatacaac agatgctaca
       61 tttgaacaag atgttttaaa atcagatgta ccggtattat tagacttctg ggcgccttgg
      121 tgtggtcctt gccgtatgat cggccccgta cttgacgatt tatctgttga tgcacaattt
      181 gatggtaaag taaaaattgt caaaatgaac gtagatgaaa atccatctgt accagcacaa
      241 tttggcgtac gcagcattcc atttttacta ttattcaaaa atggtgaagt gattgcccag
      301 caagttggtg caattccgca cgcccaaatg gctgaattta tcaaacaagc attataattt
      361 taagagcaat actagggcga atttatcgcc ctattttttt gcaaataaat agtgaaaaaa
      421 gaccgcttgt ttcagataaa cctagtcaaa agcttactaa ataggtacaa tcactaactt
      481 gcattctaag ctttaaagtg cgattcgatt ttattttgga gatatttatg tcgtggaatg
      541 aatcaggcaa tcagcaagat ccttggggta aaccggggca gaaaaaagct gagccaaagc
      601 ctgagcaaca agaacagggt tcacaacaag agccgaccaa taatcaaaga aatgaacaac
      661 agccccctga tttagaagaa gtatttagca gtttattaaa aaaaatgggg ggtggaaaag
      721 ggcctaataa tagttcaaat caacctagtg caagcttagg gaaatttcta cctgtggttt
      781 taggtcttgc agcagtagtt tgggttggct caggttttta cactgtgcaa gaggctgaac
      841 gtggtgtggt tactcgttta ggtaagctga atgatatcgt gttgccaggg ttgaattgga
      901 aaccgacttt tattgattcg gttacaagag taaacgtaga acgtgtttca gagctgaaca
      961 ccagtggctc aatgctgact caagatgaaa atatggtgca ggtagaaatg acggttcagt
     1021 atcgtgtgga agacccggct aaatatctgt ttagtgtgag caaccctgat gacagcttaa
     1081 aacaagcaac agacagtgcc ttgcgttatg tgattggtca tatgacgatg gatgaaattt
     1141 taaccacagg gcgtgcaacc gtgcgtgaaa gaacgtggtc gacattgcgt gatattatca
     1201 aaacctatga tatgggttta ttggtaacag acgtaaactt ccaatatgca cgaccgcctg
     1261 aagaggtgaa agccgccttt gatgatgcaa tcaaagcaca agaagatgag caacgcttaa
     1321 ttcgtgaagc ggaagcctat gcaagaggtg aagagccgat tgcacgtggc caggcacagc
     1381 gtacgattga gcaagctcaa gcttacaaag aagcagttgt gttaaatgcg aaaggggaag
     1441 tggagcgttt gagtcaatta ttacctgaat ataaagcctc tccagagctg actcgtgaac
     1501 gtttatatat ccagacaatg gaaaaagtca tgaaaaatac gccgaaagtg gtgatggatt
     1561 caagtggtaa taatttgaat gtattgcctt tcgataagct aatgaattct tcatcggtaa
     1621 taaaagcgga gcagcctgcg gcggcacaag tagttacacc acaagttgtt cagccgcaag
     1681 tacagccaag aacacaaatt cagccgcaac aagcagaaca acaagaacca actcgtaagg
     1741 ggagatttta atcatgcgta gattattagt acctatactt gctgtagttg cttttgttgt
     1801 gctacaggca atcaccattg taaacgaggg cgagcgtggc attatgttac gttttaacaa
     1861 agttcatcgt gatagcgatc aaaaagtggt ggtatatgaa ccggggattc actttaaagt
     1921 accatttatc gatagtttaa aggtattaga tgctcgtatt caaactctag atgggcaaga
     1981 agaccgtttt gtaacagtcg agaaaaaaga tttattagtg gactcctatg taaaatggcg
     2041 aatcagtgat tttggccaat tttatacctc tactgggggg gattaccaaa aagcggcgga
     2101 tttattacgc cgtaaggtag gggatcgtct gcgttccgag attggttctc gaaccattaa
     2161 agatattgta tccggctctc gtggtgagtt aatggcagga gcccaaaaag cgctgaatgc
     2221 cggtgaagat ggagcagagc gtttaggaat tgaagtggtt gatgtgcgag tgaagcaaat
     2281 caacttacca aatgaagttt cttcttcaat ttaccaacgt atgcgtgccg agcgtgatgc
     2341 ggttgctcgt gaacaccgct cacaaggtaa tgagaaagca gaggtaattc gtgccgaagt
     2401 ggataaaaaa gtggtgctga ttttggcaaa tgcgaacaaa actgcccaag ccttgcgagg
     2461 tgaaggtgac gctcaagctg caaaactcta ttcagagaaa tttggtaacg agccggaatt
     2521 ttacagtttt attcgtagtt taaaagccta tgaagatagc tttgccgaag gtcaaaataa
     2581 tatgatgtta ttaaagccaa acagcgaatt cttacgcttt atgcaagcac cgacaaaata
     2641 attgtatcta taaaacccga tcttgtatcg ggtttttaat tttcatccct attctgatca
     2701 taacaagcgg taaattttgg ctgatttttt gcaaaaaatt tgaaaaaatt gaccgcttgc
     2761 gatatgaagt tataatgggt ttcgttattc atcctaacta aaagaggcat ttctatgggt
     2821 aaaagtgttg ctattcttgg cgctcagtgg ggcgatgagg gaaaaggcaa aattgttgat
     2881 ttattaacag atcgtgtgaa atatgtagta cgttatcaag gtggacataa tgcagggcat
     2941 accttaatca ttaatggtga aaaaaccgtt ctgcgtttaa ttccatcggg tattttgcgt
     3001 gataacgtga cttgtttaat cggtaatggt gtagtgcttt ctccagaggc attaatgaaa
     3061 gagatggggg agctagaaga acgaggcatt aatgtgcgtg agcgtttaaa aatttctgaa
     3121 gcttgcccgt taattctgcc ttatcacgtt gcgatggatc acgctcgaga agcggcactt
     3181 ggtaaaaaca aaattggtac aacaggacgt ggtattggcc cagcttatga agataaagtc
     3241 gctcgccgtg gtttacgtgt cagcgattta ttcgacaaag aacattttgc cgcaaaatta
     3301 aaagatattt tagattacta caacttccaa ttagtcaatt attacaaagt tgaagcggta
     3361 gattatcaaa aaaccttaga tgatgtgttt gcgattgcgg atgtgattac cggaatggtt
     3421 gccgatgtga caactttact tcacgaagca cgtgaaaacg gcgacaatat tttatttgaa
     3481 ggggctcaag gcacgatgtt agatatcgac cacggtactt acccgttcgt aaccagctcg
     3541 aatacgacag caggcggtgt ggcaaccgga tcaggctacg gtcctcgtca tttagattat
     3601 gtattaggga ttatcaaagc ctactgtacc cgtgtaggta gtggaccgtt caccaccgaa
     3661 ctatttgacg atgtaggtgc tgaaattgct cgcaaaggta atgagttcgg agcggtaacc
     3721 ggtcgccctc gccgttgtgg ctggtttgat gccgtagccg ttcgccgagc agtgcaaatc
     3781 aactccattt caggcttctg tatgactaaa ctcgatgttt tagacggatt caaagagcta
     3841 aaaatctgcg ttgcctacaa aatgccaaac ggaaaaattg tcgaatatgc ccctcttgca
     3901 gcaaaagact gggaaggtgt tgaaccaatt tatgaaacaa tgccgggttg gtctgaaaat
     3961 actttccgtg tgacaaaacg tgaagattta ccacaagccg cattagatta cattaaacgt
     4021 atcgaagagc tggtcggtgt gccggtagat attctttcta caggtccgga tcgtgtcgaa
     4081 acgatgattt tgcgtgatcc ttttgcagct taataaaaga taaaataaag ccatttagtg
     4141 agatagagct agatggcttt tttgtttgaa ccagtaaact ttactttggc acaattttgt
     4201 cacaatacag aaaatagttc tttagcgtga gtttttgagg ctgtgtaagt atttgaattt
     4261 aaaagaattt aatggcacgc cctaaaggat tcgaaccttt gacccacgcc ttagaagggc
     4321 gataggtatt ttataaaagg cgtttatttt aactaataaa aacaaagact tatagagata
     4381 acccctctat attacctacc attatttcac atctttttac attaaataac accatttacg
     4441 gtacatttat ggaacacgtt ggtgatgagc tagtcttcaa aagttactaa attaaactac
     4501 aatctgcccc gtctctttta agtacttata gatacgccct aacataatct gcgttggcgt
     4561 tttgccaata tcctcttttg ttagcggtgc atcagtaatc tccttggcgg actgtgcatc
     4621 aatgtatttg tactcacttg tgatgattac aaagtttgtt acttctccat cggtatcatc
     4681 gcctgtaccg accacatatt tagcattgag cgagccgtca tcttgcgttg agtagcttgc
     4741 gatggtggaa tacattgggt ttaagatttt gttaaaagtt gtcataattt ttccttttgt
     4801 ggattgttga taaaaaaaga ccgcttgtag tcatacaaac ggcttagtag gaagagtaaa
     4861 ttgctttaca taatataacc ttttatttat acttcattta taaatagtaa gttataaaag
     4921 gttcaaaaat ggcagaccct atagaatggt ctattatcac gactgactgc tttgatgaat
     4981 ggttcggtca acaagatgaa agtactcaag aacgtgtctt ggcttgttta atctatctgc
     5041 ggaaattcgg ttatagtcta ggcagacctt atgctgatac agtttatcag tctaaattcc
     5101 ctaatatgaa agagttacgc attcaaaaca aaggtaagcc aattcgagca ttttatgctt
     5161 ttgacccttt acgccaagcg atagtacttt gtgctggcga gaaaggtaaa gacaaaagat
     5221 tctatgaaaa aatgatcgct cttgctgatg cggaatttac ctcctattta aataatttag
     5281 agaaagaaaa tgaaaacgtt agatcaaatg ctcaatgaac tctctcctga acgccgccaa
     5341 aaagtggaag atatggctca agaaatgatt agagagatac aactttcaaa actaagagaa
     5401 gagctaaatc tctctcaaca acaattagct acagctctcg gtatttcaca gcctgctatt
     5461 gctaaacttg aacagaaaga taacgatcca agattatcca cgctcaaacg ctatattgaa
     5521 gcaatgggcg gtaagttaaa acttgccgtt gaattgccta caggcgatga gcgtgtaatt
     5581 aggatttaat tactttgtta a
//
LOCUS       DANLTI010000146         5581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.147, whole genome shotgun sequence.
ACCESSION   DANLTI010000146 DANLTI010000000
VERSION     DANLTI010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.147"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            93..611
                     /gene="hutZ"
                     /locus_tag="PXB09_002383"
     CDS             93..611
                     /gene="hutZ"
                     /locus_tag="PXB09_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein HutZ"
                     /protein_id="HDL5234443.1"
                     /translation="MTTNRQEVLQNRLGPEIEELKQQIKTIMLATIDKDGVPNVSYAP
                     FVINNGEYQVLITTIARHARNLQEVPKVSLMLIEDESKSRQIFARRRLTFDATVRMIE
                     RTDEEWNNSIAALKARHGDLVDELSNMQDFKLFSFKPTAGLFVKGFGKAFDVGVDDLI
                     NVVHLDQGHQTA"
     gene            761..3373
                     /gene="pepN"
                     /locus_tag="PXB09_002384"
     CDS             761..3373
                     /gene="pepN"
                     /locus_tag="PXB09_002384"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDL5234444.1"
                     /translation="MQPKAKLRKDYRAPDFTITDIYLDFQLDPDRTFVTSKLTVVRKN
                     PEATTLRLDGHSFDFLSLKYNGEPFSAFQKDDESLTLNLADVPAERFELEIETALNPA
                     QNTSLQGLYKSGDGFCTQCEAEGFRQITYMLDRPDVLAKYTTKITASKSKYPYLLSNG
                     NHIAQGDLHDGRHWVEWQDPFFKPSYLFALVAGDFDLLQDKFITKSGREVTLEIYVDR
                     GNLDRAPWAMESLKRSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKF
                     VLAKPETATDTDYLDIEAVIAHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFTSD
                     LWSRSAKRIEDVRLLRTVQFAEDASPMAHPIRPEKVIEMNNFYTVTVYEKGAEIIRMI
                     HTLLGEEKFQQGMQLYVARHDGSAATCEDFVKAMEDASGVNLEQFRRWYSQSGTPELT
                     ISDEYDETRKAYRLHISQMTPATHDQMDKLNLHIPLKVALYGEQDGKRIPLQYELLTV
                     SDVLDVTAEHQTFEFHNVTQRPVPALLCDFSAPVRLDYNYTTEQLLTLLKHAENDFVR
                     WDAAQMLYTNELRENLSRYQQHQPLSFSEGLVNALTFVLDNSASLPELTALTLTLPKE
                     TEFAESFKTIDPQGIAVVREFMQHSIAHALQDKLLAVYHQNQCGEYQVVAEDIAKRAL
                     RNACLSYLAFTDLGNALVHKHYNNADNMTDTLAALQAATKAQLSCRDALLADFEQKWK
                     HDGLVMDKWFMLQATRPDDDVLSIVQNLMEHPSFNFNNPNRLRSLVGAFCGQNPKAFH
                     AIDGSGYRFLVDTLIKLNESNPQVAARLIEPLIKLSRYDNQRQTLMRRGLERLRELDN
                     LARDLFEKIEKALD"
     gene            complement(3433..3705)
                     /locus_tag="PXB09_002385"
     CDS             complement(3433..3705)
                     /locus_tag="PXB09_002385"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDL5234445.1"
                     /translation="MVAKLFSVYGRVQGVAFRFFTLQEANRLGIKGYVRNRDDGSVEV
                     VAEADEQTIAQLENWLQQGSPAAKVERVIVSDYLGSERFKRFEVRY"
     gene            complement(3759..5393)
                     /locus_tag="PXB09_002386"
     CDS             complement(3759..5393)
                     /locus_tag="PXB09_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700110.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDL5234446.1"
                     /translation="MQSKFSLSLLTTSLVLGLSANVFAAKVPEGTTLAEKQEITINNG
                     FEPSSFDPHKIEGVPESQVAYQLFEGLVTKDSDGNIQPGVAESWENTPDYKTWTFKLR
                     QDAKWSNGDAVTAHDFVFAWQRLVNPLTASPYSSYLTYLNVENAQDIIDGKKKPEELA
                     VKAIDDHTFQVQLSQPVPYAVELATHSSLLPVHKATVEKHGDAWVQKGNLVGNGAYTL
                     ADHVINEKIVFERNKNYWNDKETVINKATFLAIANAATDVSRYRAGDLDMTNYALPPE
                     QFATLKKEIPNEVFTARTLSTYYYEINHKRAPFDNVKVREALNLALDRTIITDKVLGQ
                     GQTPTYVFTPPYIHEGEKIQQPAYSKDSMADRKAKALKLLEEAGYSKANPLKFTILYN
                     TNDNHKKIAIAVSSLWKQGTDGIVDVKLENQEWKTFLDTRRNANYDVSRAGWSADYNQ
                     ATTFVNYFLSNSSNNTAFYKSQAYDDAVAESYKATDAAGRAAAYAKAEEQLAKDYAII
                     PIYNYVNPRLVKPYVKGYEGKDPQDDILLRNLYIVK"
BASE COUNT         1639 a         1190 c         1103 g         1649 t
ORIGIN      
        1 cacatttata gtcaataatg attctcatat ggattgaaag ttttcactct ttatagtaat
       61 ctaaaaaaac actatttaaa ttgaggtatt ttatgacaac caaccgtcaa gaggtcttac
      121 aaaaccgttt aggtccagaa attgaagaat taaaacaaca aatcaaaact ataatgcttg
      181 caaccataga taaagatggt gtaccgaatg tgagctatgc cccttttgta attaataacg
      241 gcgaatatca agtcttaatc actactattg cccgtcacgc tcgtaattta caagaggtgc
      301 caaaagtctc tttaatgcta attgaggatg aaagtaagag ccgtcaaatt tttgcccgtc
      361 gtcgcttaac ctttgacgca acagtgcgaa tgattgaacg tactgatgag gaatggaata
      421 atagcattgc agcacttaaa gctcgtcacg gcgatttagt tgatgaactg tcaaatatgc
      481 aagatttcaa gctctttagc tttaagccaa cggcaggctt atttgtaaaa ggatttggta
      541 aagcctttga tgttggtgtt gatgacttaa ttaatgtcgt tcatttagac caaggccacc
      601 aaactgccta attgcgaaat aaactcacgg ctataaataa tcctatttat agccgttttt
      661 attgcgacaa gcggtcaaat tttttggaaa atttaccgct attttagtac aataacgaca
      721 ctattctatg agctaaacgc aactaaaaaa aggaaatcct atgcaaccta aagcgaaact
      781 cagaaaagat tatcgagctc ccgatttcac tattactgat atttatcttg acttccaact
      841 tgacccagat cgcacttttg tcacctcaaa actaactgtc gtgcgtaaaa atcctgaggc
      901 gacaacactt cgtttagacg gtcatagttt cgatttcctt tcgcttaaat ataacggcga
      961 gccgttttcc gcctttcaaa aagatgatga atctttaacc ttaaatttag ccgatgtgcc
     1021 tgccgagcgg ttcgagcttg aaattgaaac cgcattaaat ccggcacaaa acacctcgtt
     1081 acaaggtttg tataaatcgg gcgacgggtt ttgcacccag tgtgaggctg aaggtttccg
     1141 ccagattacc tatatgctcg accgccctga tgtacttgca aaatatacga caaaaatcac
     1201 cgctagtaag agcaaatacc cgtatctgct ttctaacggc aaccacattg cccaaggcga
     1261 cttgcacgat ggcagacact gggtggaatg gcaagatccg ttctttaaac caagctattt
     1321 atttgccttg gttgcggggg attttgactt actccaagat aaattcatca ccaaaagcgg
     1381 acgtgaagtc acgcttgaaa tttatgtcga tcgtggaaat ttagaccgtg caccttgggc
     1441 gatggagagc ttaaaacgtt caatgaaatg ggatgaagag cgtttcggtt tggaatacga
     1501 tttagatatt tatatgattg ttgccgttga tttcttcaat atgggagcaa tggaaaacaa
     1561 agggttaaat attttcaatt ccaaatttgt attggcaaaa ccggaaaccg caaccgatac
     1621 ggattattta gatattgaag cggtgattgc ccacgaatac ttccataatt ggacgggcaa
     1681 ccgcattacc tgccgtgatt ggttccaact aagcttaaaa gagggcttaa ccgtcttccg
     1741 tgatcaggaa tttacctccg atttatggtc tcgttcggca aaacggattg aagatgtgcg
     1801 tttactgcgt accgtacaat ttgccgaaga tgccagcccg atggctcacc cgattcgccc
     1861 ggaaaaagtg attgaaatga ataatttcta caccgtgact gtgtatgaaa aaggggcgga
     1921 aattattcgt atgattcaca ccctgttagg cgaagaaaaa ttccagcaag gtatgcaact
     1981 ttatgtggca agacacgatg gttctgcggc aacttgtgaa gatttcgtta aagcaatgga
     2041 agatgcttca ggcgttaatc ttgaacaatt ccgccgttgg tatagccaat ccggcacgcc
     2101 tgagctcacc atttccgatg aatatgatga aacccgcaag gcataccgct tgcatatttc
     2161 acaaatgaca ccggcaaccc acgatcagat ggataaactc aatctgcata ttccgcttaa
     2221 agtagcgtta tatggtgaac aggacggtaa acgcattccg ttacaatatg aattattgac
     2281 cgtaagcgat gtgttagatg taaccgcaga acaccaaacc tttgagtttc ataatgtaac
     2341 acaacgcccg gtgcctgcat tactgtgtga tttctctgca ccggtacggt tagattacaa
     2401 ctataccacc gagcagcttt taaccttact caaacacgct gaaaatgatt ttgtacgctg
     2461 ggatgcagct caaatgctct ataccaatga actgcgtgaa aatttaagcc gttatcagca
     2521 acatcaacca ctcagcttct cagaagggtt ggtgaatgcc ctaacgttcg tgttggataa
     2581 ctcagcaagc ctgccggaac taactgcatt aaccctcaca ttgccaaaag aaaccgagtt
     2641 tgcagaatcg ttcaaaacca ttgacccaca aggtattgcg gttgtgcgtg aatttatgca
     2701 gcattccatt gctcacgcct tgcaagataa gttattagcg gtatatcacc aaaaccaatg
     2761 cggggaatat caagtcgtgg ctgaagatat tgctaaacga gccttgcgta atgcttgctt
     2821 aagctattta gcctttactg atttaggcaa cgcgttggtg cataagcatt acaataatgc
     2881 cgataatatg actgatacgc ttgctgcatt acaagccgca accaaagccc agctaagttg
     2941 ccgtgatgca ttattagccg attttgagca aaaatggaaa catgatggtt tagtgatgga
     3001 taaatggttt atgctacaag ccacccgacc ggacgacgat gtgttatcca tcgtgcaaaa
     3061 tttaatggaa cacccaagtt ttaactttaa taacccgaac cgtttacgtt cattagtagg
     3121 tgcattctgc ggtcaaaacc cgaaagcctt ccacgccatt gacggttcag gctatcgttt
     3181 cttggtagat acgctgatta aacttaacga aagtaaccca caagttgctg ctcgacttat
     3241 tgagccgtta attaaactct cacgctacga taaccaacgc caaaccttga tgcgtcgtgg
     3301 tctagaacgc ctgcgtgagc tggataattt agcacgagat ctgtttgaga aaattgaaaa
     3361 agcgttagat taaaccaagc aatacaagcg gtgtcgtttg caaatttttt tacaaatgac
     3421 accgcttgtt agttaatacc ttacctcaaa ccttttaaac ctttctgagc caagataatc
     3481 gctcacaatt acccgttcca cctttgcagc aggtgagcct tgttgtaacc aattttccag
     3541 ttgagcgatt gtctgttcat ccgcttcagc taccacttct accgagccgt catcacgatt
     3601 tctgacatag ccttttatgc ctaatcgatt cgcttcctgc aaggtaaaaa accgaaaagc
     3661 gacaccttga acccgtccgt aaaccgagaa taattttgcg accattcttc ccccataaaa
     3721 ataggctgct tatttttcaa taaacagccc ataatgtctt atttcacgat gtagaggtta
     3781 cgcagtaaaa tatcatcttg cggatcttta ccctcatagc ctttcacgta aggtttcacc
     3841 aaacgtgggt ttacatagtt ataaatcgga ataatcgcat aatctttggc taactgctcc
     3901 tctgcttttg cataagcagc tgcacgacca gctgcgtctg tcgctttgta agattctgct
     3961 accgcatcat cataagcttg gctcttataa aacgcagtat tgttgctgga gttcgataag
     4021 aaatagttca caaaggtggt tgcttggtta tagtctgccg accaacctgc acgagaaaca
     4081 tcataatttg cattgcggcg ggtatctaag aatgttttcc actcttggtt ttctaatttc
     4141 acatcaacaa tgccgtctgt gccttgtttc cataatgatg aaactgcaat cgcaattttc
     4201 ttgtggttgt cgttggtatt ataaagaata gtaaatttta acgggttcgc tttactgtaa
     4261 ccggcttctt ccaataattt caacgctttg gcttttctat ctgccattga atctttggaa
     4321 taagcaggtt gctggatttt ttcaccctcg tgaatataag gcggtgtaaa tacataagtt
     4381 ggtgtttgac cttgtcctag cactttatcg gtaataatgg tgcgatctaa agctaagttt
     4441 aacgcctcac gcactttcac attatcaaac ggtgctcgtt tatggttaat ttcatagtaa
     4501 taagtagaaa gggttcttgc cgtaaacact tcgtttggaa tctctttttt caaggttgca
     4561 aactgctccg gtggaagagc atagttggtc atatccaaat caccggcacg gtaacgtgaa
     4621 acatcagttg cggcattagc aatggctaag aaagtcgctt tattaatcac ggtttcttta
     4681 tcattccaat aatttttatt acgctcaaac acgatttttt cattaataac gtgatcggct
     4741 aaggtataag ccccgtttcc aaccagattg cctttttgca cccacgcatc gccgtgtttc
     4801 tcaacggttg ctttgtgtac aggtaataaa gaagagtgtg ttgccagctc aactgcatac
     4861 gggacaggtt ggcttaactg cacctggaaa gtatgatcat caatcgcttt aactgctagt
     4921 tcctccggtt ttttcttgcc gtcaataata tcttgagcat tttctacatt gagataagtt
     4981 aaatagcttg aataaggtga agccgtaagt ggattaacca aacgctgcca agcaaatacg
     5041 aaatcgtgag cagttacggc atcaccgttt gaccatttag cgtcttggcg taatttgaac
     5101 gtccacgttt tgtaatccgg tgtattttcc caactttctg ccacacccgg ctgaatattg
     5161 ccgtcagaat ctttcgttac caatccttca aataactgat aagcaacttg cgattccggc
     5221 acgccctcaa ttttatgtgg atcaaaactt gatggctcaa aaccattatt aatcgtaatt
     5281 tcttgttttt ctgcaagcgt tgttccttca ggcactttgg ctgcaaacac atttgccgat
     5341 aagcctaaca ctaatgaggt tgttaataag gaaagcgaga attttgactg catatttgat
     5401 ctccattgat gaatattggc ttgcaaccag ccgatttgtt ctaattaatt tttttaagtc
     5461 taggcattat tattttgatt gcaaggaatt tttttaaaaa atgtgataga tatcaccttt
     5521 caatgcaaaa attgcataaa aaaatcccga agaaaatagc tctataaact ctgataatgg
     5581 c
//
LOCUS       DANLTI010000147         5369 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.148, whole genome shotgun sequence.
ACCESSION   DANLTI010000147 DANLTI010000000
VERSION     DANLTI010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5369
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.148"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(65..1267)
                     /gene="tet(H)"
                     /locus_tag="PXB09_002387"
     CDS             complement(65..1267)
                     /gene="tet(H)"
                     /locus_tag="PXB09_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL5234447.1"
                     /translation="MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYG
                     VLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI
                     IAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP
                     FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATY
                     FIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEK
                     TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGK
                     LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT
                     PKAVISTP"
     gene            1359..1982
                     /gene="tetR(H)"
                     /locus_tag="PXB09_002388"
     CDS             1359..1982
                     /gene="tetR(H)"
                     /locus_tag="PXB09_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(H)"
                     /protein_id="HDL5234448.1"
                     /translation="MAKLDKEQVIDNALILLNEVGIEGLTTRKLAQKIGVEQPTLYWH
                     VKNKRALLDALAETILQKHHHHVLPLPNETWQDFLRNNAKSFRQALLMYRDGGKIHAG
                     TRPSESQFETSEQQLQFLCDAGFSLSQAVYALSSIAHFTLGSVLETQEHQESQKEREK
                     VETDTVAYPPLLTQAVAIMDSDNGDAAFLFVLDVMISGLETVLKSAK"
     gene            complement(1985..2230)
                     /locus_tag="PXB09_002389"
     CDS             complement(1985..2230)
                     /locus_tag="PXB09_002389"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234449.1"
                     /translation="MNKTKGCLIANFATVPLKLGQSALIEPDSPLQLGSLMPENGVIF
                     SDGIEDDYLQFNAGCIAHIGIADIQGQLISQKGRQRI"
     gene            complement(2236..2940)
                     /locus_tag="PXB09_002390"
     CDS             complement(2236..2940)
                     /locus_tag="PXB09_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDL5234450.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            complement(3031..3858)
                     /locus_tag="PXB09_002391"
     CDS             complement(3031..3858)
                     /locus_tag="PXB09_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL5234451.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
     gene            complement(3935..4726)
                     /locus_tag="PXB09_002392"
     CDS             complement(3935..4726)
                     /locus_tag="PXB09_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL5234452.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            complement(4784..5317)
                     /gene="aadB"
                     /locus_tag="PXB09_002393"
     CDS             complement(4784..5317)
                     /gene="aadB"
                     /locus_tag="PXB09_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL5234453.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
BASE COUNT         1437 a         1325 c         1237 g         1370 t
ORIGIN      
        1 aataaagtcc tatcaacgtt attaagagcg gacaggactt ttatgatctt tataatttct
       61 agtattaagg ggttgaaata acagctttag gtgtggtttt tctttggtga aaataagcgg
      121 taataagcaa catagcataa agtattgccc ccatcagcca taacagacca tcccaataag
      181 cgacgctata actataaata aaggcaaata aaaggggacc aatgatcccg gtaatattgg
      241 ttaggctcac cagagtacct tgtaatttcc cttgcgcatt atcatcgaca gattttgata
      301 aataaccttg taatgcgggt tgccccatac ctcctgccgc taagcaaatt aatgctggta
      361 agatgaccca aacgtggcct atccacgcta ataataaaca gcccatcata tcaatagaca
      421 tactgatcat aatggtggtt ttttcgcccc atttttgtgc caatttccca gcgacaatcg
      481 cctgaaagaa aatatttaat acacccagaa ccgccaaaga cataccgata gaagttgtgt
      541 tccaatcaaa acgatattgt gtaaacagca cccagatggt ggcaggaatt tgcccgataa
      601 gctggataat aaaataggtt gctaaccaaa agtagaggct tttcttaaaa aaaacagtga
      661 ctgtatttga ggcagtttgg ttttcaggtg tcctattggc aacaagcgct tctctttttt
      721 gtgtttctcg gaaaaagagc aaagagagta ttaataatat cgagtgtgaa atagcggcaa
      781 aaataaatgg catatgagca ctgatatcac ctaataatcc ccctagcatt gggccgataa
      841 taaggccaac accaaaagca ccacctaaga aaccaaaata gcgagttcga tttttagcgg
      901 gagtcacatc actcatcgct gatgcacata cggcacctgt tgcgcctgtg atccccgcaa
      961 tgatgcgccc aatatagagc atccaaagtg tggttgagaa tgccattaaa agatagtcga
     1021 gtgccgcgcc taaaagggaa aacagcaaga tgggttttct gccgtattta tcagacagtc
     1081 gtcctagaat aggagcaaaa ataacctgca tggtagcata gagcgctaat agcacaccgt
     1141 aatgggttgc cagtgaattt tcactgacaa attcatttaa tagagtaggg agtactggca
     1201 tgataagccc gataccaatg gcatctaata cggtgatcag cagtataata ataattgatt
     1261 tattcattga gatcctaaaa atctatcagt gatagagtgg gtgtaatata tctctatcag
     1321 tgatagattg tcaaggctat tttattttga ggtaggtaat ggcaaagcta gataaagaac
     1381 aagttattga taatgcgttg attttactta atgaagttgg tattgaagga ttaacaacgc
     1441 gtaagctggc gcaaaaaata ggtgtggaac aacccacatt gtattggcat gtaaaaaata
     1501 aacgcgcttt gttagatgca ttagcagaaa ctattttgca aaagcaccat catcatgttt
     1561 tgccattgcc gaatgaaaca tggcaggact ttttgcgaaa taacgcgaaa agcttccgcc
     1621 aagccttatt aatgtatcgt gatggtggca aaattcatgc gggaacacgc ccctctgaaa
     1681 gtcaatttga gacatcagaa cagcaactac agtttttgtg tgatgctggg tttagtctat
     1741 ctcaagccgt gtatgcatta agctctattg cgcattttac attaggctcc gtactggaaa
     1801 ctcaagagca tcaagaaagc caaaaagagc gtgaaaaagt agagacggat actgttgcct
     1861 atccgccatt attaacccaa gccgttgcaa ttatggatag tgataatggt gatgctgcat
     1921 ttttgtttgt ccttgatgtg atgatctctg gacttgaaac agtattaaag agcgctaaat
     1981 aaatctaaat tcgctgacgc cctttttggc taattagttg cccttgtatg tcagcgatac
     2041 caatgtgagc aatacaacct gcattaaatt gtaaatagtc atcttcgatg ccatcagaga
     2101 aaattacgcc attctctggc atcaaagatc ctaattgcag tggtgagtca ggctcaatca
     2161 gtgccgattg accgagcttt aacggcactg ttgcaaagtt agcgatgagg cagccttttg
     2221 tcttattcaa aggccttaca tttcaaaaac tctgcttacc aggcgcattt cgcccagggg
     2281 atcaccataa taaaatgctg aggcctggcc tttgcgtagt gcacgcatca cctcaatacc
     2341 tttgatggtg gcgtaagccg tcttcatgga tttaaatccc agcgtggcgt tgattatccg
     2401 tttcagtttg ccatgatcgc attcaatcac gttgttccgg tacttaatct gtcggtgttc
     2461 aacgtcagac gggcaccggc cttcgcgttt gagcagagca agcgcgcgac cataggcggg
     2521 cgctttatcc gtgttgatga atcgtgggat ctgccacttc ttcacgttgt tgaggatttt
     2581 acccagaaac cggtatgcag ctttgctgtt acgacgggag gagagataaa aatcgacagt
     2641 gcggccccgg ctgtcgacgg cccggtacag atacgcccag cggccattga ccttcacgta
     2701 ggtttcatcc atgtgccacg ggcaaagatc ggaagggtta cgccagtacc agcgcagccg
     2761 tttttccatt tcaggcgcat aacgctgaac ccagcggtaa atcgtggagt gatcgacatt
     2821 cactccgcgt tcagccagca tctcctgcag ctcacggtaa ctgatgccgt atttgcagta
     2881 ccagcgtacg gcccacagaa tgatgtcacg ctgaaaatgc cggcctttga atgggttcat
     2941 gtgcagctcc atcagcaaaa ggggatgata agtttatcac caccgactat ttgcaacagt
     3001 gcccgttgaa gtaaccggcg ctgcgcggtt ttatcgcgca gcgtccgagt tgactgccgg
     3061 gttgggcggt aacgcttcaa tagagcgaag gattgcccgc acgattgcct ccctcttgaa
     3121 aagatcatcc attctgtttg gcgtatcaat attcagtgcg aagaatacgg agccagtcgg
     3181 ccactcaacc catcctaccc accaacccat acggccttcc cagcccgtct ttgcacgcag
     3241 tatccagttg cgaccggctt ccacaatcat gagatccttg accaagcgct gatgttctac
     3301 ccgaaagggc agctcgttac gatagagctt cctgagaaat gcaatttgct cctgcgccga
     3361 gattgcaagg ctgccttcta tccagtaatc gccattactt gtcgaaggat cggcgttgcc
     3421 atagtcgatt ttcttcaaat agcgccgagc tttgtcatca ccaatttcct ttgcaaatag
     3481 ctcatacacc caaacagtag aattccgcat tgctgatcgc aaatcttggt cttgattgtg
     3541 gcctgcaaag cccctgttaa cgccgtccca tcgaaaaatc tggaactcat cacgaacagc
     3601 gcctgcatca agtgcaaaaa gtgtatgagg tatcttgaat gtcgatgcag gcgagtagcg
     3661 tttcttcgat cgcacaggat caaaaaccaa catggcacga tccgcttggc gttcgtctgc
     3721 cacaactatc gtgcctttgg cttgaaattc gctgaaaaac ttcctccagt cagaacgttc
     3781 tagcgtgcct tcttgcgcat gcgcgaaagt ggcaagagaa aaaatggaga aaagtatcgc
     3841 gaagattcgg attgccatta acttttcctt aatgcccaac ggccaaggta agccgcgccg
     3901 cgaagcggcg tcggcttgaa cgaattgtta gacattattt gccgactacc ttggtgatct
     3961 cgcctttcac gtagtgaaca aattcttcca actgatctgc gcgcgaggcc aagcgatctt
     4021 cttcttgtcc aagataagcc tgtctagctt caagtaagac gggctgatac tgggcaggta
     4081 ggcgttttat tgcccagtcg gcagcgacat ccttcggcgc gattttgccg gttattgcgc
     4141 tgtaccaaat gcgggacaac gtaagcacta catttcgctc atcgccagcc cagtcgggcg
     4201 gcgagttcca tagcgttaag gtttcattta gcgcctcaaa tagatcctgt tcaggaaccg
     4261 gatcaaagag ttcctccgcc gctggaccta ccaaggcaac gctatgttct cttgcttttg
     4321 tcagcaagat agccagatca atgtcgatca tggctggctc gaagataccc gcaagaatgt
     4381 cattgcgctg ccattctcca aattgcagct cgcgcttagc cggataacgc cacgggatga
     4441 tgtcgtcatg cacgacaagg gtgacttcta tagcgcggag cgtctcgctc tcgccaggga
     4501 aagccgaagc ctccataaga tcattgagca atgctcgccg cgtcgtttca tcaagcttta
     4561 cggccacagt aaccaacaaa tcaatatcgc tgtatggctt caggccgcca tccactgcgg
     4621 agccgtacaa atgcacggcc agcaacgttg attccagatg gcgctcaatg acgcttagca
     4681 cctctgatag ttggttcgaa atttcgatgg tcaccgcttc cctcatgatg tctaacacct
     4741 gagttaagcc gcgccgcgaa gcggcgtcgg cttggacgaa ttgttaggcc gcatatcgcg
     4801 acctgaaagc ggcacgcaag acctcaacct tttccgcccc gagtgaggtg catgcgagcc
     4861 tgtaggactc tatgtgcttt gtaggccagt ccactggtgg tacttcatcg gcatagtaaa
     4921 agtaatccca gatgatcgcc tcccagctgt tacaacggac tggccgcccg gcgatgacgc
     4981 cctcagccgc ctctgggcac gagccctgcg gagcctccgc gatttcatac gcttcgtctg
     5041 cccaccaagc aggttcgcag tcaagtaact catccccgat ctccgctaag aatccatagt
     5101 ccaactcctc catgacgcgc ccgccgagca tttcaactat tgcctcgagc tcgccgcgcc
     5161 tctcgccggg aaacgtcaga tcaatatcat cgtgcttgcg tgttacacgc cctagccgtg
     5221 catcgatcgc ccagccccca ccgatccaga gcggcagatt tcgctcatct gccgcagcta
     5281 gaattttgtg tatcaatgtg acctgcgttg tgtccatgcg gcctaacctt tgttttaggg
     5341 cgactgccct gctgcgtaac atcgttgct
//
LOCUS       DANLTI010000148         5344 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.149, whole genome shotgun sequence.
ACCESSION   DANLTI010000148 DANLTI010000000
VERSION     DANLTI010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5344
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.149"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            70..915
                     /locus_tag="PXB09_002394"
     CDS             70..915
                     /locus_tag="PXB09_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5234454.1"
                     /translation="MKEKIIKTNGIELCTESFGNKKNPAILLVAGATVSMLYWDTEFC
                     QQLSEKGFFVIRYDNRDVGKSTNYEPGSTPYDIVDLTNDAISILDGYKIDKAHFVGIS
                     LGGLISQIASIKFADRVNSLTLMSSGPWGDSDPTIPEMDTSILDFHSKAGTVNWTNED
                     SVVNYLIQGAELMSGKKQFDKQRSEKLIRAEFNRANNYISMFNHAALQGGGEEYWNRL
                     NEIKQPTLIIHGTDDKIWHYKNAGFLLEKIKGSNLITLEGTGHELHVDDWKSIIDGIE
                     KHIND"
     gene            complement(1240..2646)
                     /locus_tag="PXB09_002395"
     CDS             complement(1240..2646)
                     /locus_tag="PXB09_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDL5234455.1"
                     /translation="MIVKFFKKHGKGKASSCKACVDYLLNKPDDTAQILQGDPRLSQS
                     IADSLDFNNTYTAGCLSFEESDLPEIQKREIMARFEKAMFAGLEPEQYNIAWVQHTDK
                     GRLELNFVIPNVEMTSGKRLQPYYDRADRPLAENFKQVINHEYSLSDPNNPIKQKNLI
                     DRKDLPTDKKQALQAITDGLTALANAGQINDRQDVINALERAGFEIARITPKNLSIKT
                     DGQNLRLKGAFYEQDFRFSTDLSADITERAREYKRDSAERYQTARAKLDTAVTARREQ
                     FSRKYPNRAGEIDKKYRENVSLADPNRLDDISLDSHNRRRFDVAGEERLSRDDRMAKF
                     SRDSQRAEWGDQAINLQNGERDKALCSSGQGFYQLNVGREPESNRNPRNQETGEKING
                     DRTRTTLRENLENLARTARNRASEIIERIRELASRKRLDHSTVQRNQRAINDITEFNK
                     QLETVISQRKRQSRGMSR"
     gene            complement(2643..2948)
                     /locus_tag="PXB09_002396"
     CDS             complement(2643..2948)
                     /locus_tag="PXB09_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HDL5234456.1"
                     /translation="MKREKEIKIRLTENEYQALLERKTKARLAEWVREVALEQQPKRQ
                     PKVIDPALLFELNRIGVNLNQIARQCNSQKPSIDLVSVLATLREIEKNLKKLRELSL"
     gene            4142..4279
                     /locus_tag="PXB09_002397"
     CDS             4142..4279
                     /locus_tag="PXB09_002397"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234457.1"
                     /translation="MKPLRIGARVIYPLQDLDKQIAYLEANLLENIKVHFIVESIEIK
                     G"
     gene            4414..5331
                     /locus_tag="PXB09_002398"
     CDS             4414..5331
                     /locus_tag="PXB09_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cephalosporin-hydrolyzing class A beta-lactamase
                     ROB-1"
                     /protein_id="HDL5234458.1"
                     /translation="MLNKLKIGTLLLLTLTACSPNSVHSVTSNPQPASAPVQQSATQA
                     TFQQTLANLEQQYQARIGVYVWDTETGHSLSYRADERFAYASTFKALLAGAVLQSLPE
                     KDLNRTISYSQKDLVSYSPETQKYVGKGMTIAQLCEAAVRFSDNSATNLLLKELGGVE
                     QYQRILRQLGDNVTHTNRLEPDLNQAKPNDIRDTSTPKQMAMNLNAYLLGNTLTESQK
                     TILWNWLDNNATGNPLIRAATPTSWKVYDKSGAGKYGVRNDIAVVRIPNRKPIVMAIM
                     STQFTEEAKFNNKLVEDAAKQVFHTLQLN"
BASE COUNT         1514 a         1078 c         1095 g         1657 t
ORIGIN      
        1 aaaaaaaaac tactttggat attaatttta ggactgataa taatcagttg caaacaaagg
       61 aaaacagaaa tgaaagagaa aataattaaa acaaacggca ttgaactctg tacggaaagt
      121 tttggaaata agaaaaatcc agcaatcctt ttggtagcag gtgcaaccgt atcaatgctg
      181 tattgggaca ctgaattttg ccaacaatta tctgaaaaag gattttttgt tattcgttac
      241 gacaacagag atgtaggaaa atccactaat tatgaaccag gttctactcc atacgatatt
      301 gttgacttaa ctaatgacgc tatttcaata ttggatggct acaagattga caaagcacat
      361 tttgtgggga tttctttggg cggactaatt tctcaaatag catcaataaa gtttgccgac
      421 agagttaact ccttaactct tatgtcatca ggcccttggg gagactcaga cccaactata
      481 cctgaaatgg acacgagtat tttagatttc catagtaaag caggtacagt caattggaca
      541 aatgaagaca gtgtggtaaa ctatttaatt cagggtgcag aattaatgag tggcaagaaa
      601 caatttgaca aacaaagaag tgaaaaactg ataagagctg agttcaatag agccaacaat
      661 tatataagta tgttcaatca cgctgcattg caaggtggtg gtgaagaata ttggaacaga
      721 ttaaacgaaa tcaaacaacc caccttaatt atccacggaa cagacgacaa aatttggcat
      781 tataagaatg caggtttttt actagaaaaa ataaaaggtt caaatctaat cacccttgaa
      841 ggtacaggac acgaattaca cgttgatgat tggaaatcaa taattgatgg aatagaaaaa
      901 cacataaatg actgataaac aaaaacaacg acccgctaac aatgtatata aaaaataggc
      961 gaaacagtag taaattcaag gcttttggct cgtattatac tttgtgctta accgaaaatt
     1021 tggcacttcg aaatcgccta cttttcgctg aatttacaat ccaagtgcaa caaaaaaaga
     1081 agtactcatc aactagaata taattttgtt tccacacaaa aaccacttcc aaatgatgag
     1141 tacttcctac cgacatctta caataagccg agtgtttgag aaataccatt tattaaactg
     1201 tctttttcca taagtgttgc cataattctc ccccttgttt tatctgctca tacccctgct
     1261 ttgtcttttg cgttgagata ttaccgtttc aagctgttta ttaaactctg taatgtcgtt
     1321 aattgctcgc tgatttcgtt gtactgttga atgatcaagg cgttttcggc tcgcaagctc
     1381 tctaattctt tcgataattt cactcgctct gtttcttgct gttctagcaa ggttttcaag
     1441 gttttctcgt aaagtagttc tagttcggtc gccatttatt ttttcccctg tttcttggtt
     1501 tcttggattt cgattacttt caggttctcg ccccacgttg agttgataaa atccttgtcc
     1561 actgctacac aaggctttat ccctttctcc gttttgcaag ttgatagctt gatcccccca
     1621 ctctgctctt tggctatctc ggctgaattt tgccattcgg tcatctcttg ataggcgttc
     1681 ttcgcctgcc acgtcaaaac gcctgcggtt atggctatca aggctaatat cgtcaaggcg
     1741 attagggtcg gcaagcgata cattctcacg gtatttttta tcaatttcgc ctgctcgatt
     1801 tggatatttt cggctaaatt gttccctgcg tgctgtaact gctgtatcaa gttttgctcg
     1861 tgccgtttga tagcgttctg cactatctcg cttgtactct ctagctcttt ctgtgatgtc
     1921 tgctgaaagg tctgtgctaa atctaaaatc ttgctcatag aaagcccctt ttaatcttaa
     1981 attctgtccg tcagtcttga ttgataggtt ttttggcgta atgcgtgcaa tttcaaaacc
     2041 tgcacgttct agggcattta taacgtcctg tcggtcgttt atctgccctg cgttcgctaa
     2101 agctgttaaa ccgtccgtaa tcgcctgtaa agcctgtttt ttatcggttg gtaggtcttt
     2161 gcggtcaatc aggttttttt gctttatagg gttgtttggg tcgcttaggc tgtattcgtg
     2221 gttgattacc tgcttgaagt tttcagcaag tgggcggtct gccctgtcgt agtagggttg
     2281 taggcgtttt ccgcttgtca tctctacgtt tgggataacg aaattcagct caagcctgcc
     2341 tttgtcggtg tgttgtaccc acgcaatgtt atattgttca ggctcaagcc ctgcaaacat
     2401 tgccttttca aagcgtgcca taatctcacg cttttgtatt tcgggtaggt cgctttcttc
     2461 aaaagacaag caacctgcgg tgtaagtgtt attaaaatca agactatcag caatactttg
     2521 tgatagtcgg ggatcgccct gcaggatttg ggcggtgtcg tcaggcttat ttagtaaata
     2581 gtccacacaa gccttgcaac tactagcttt tcccttaccg tgtttcttaa aaaatttaac
     2641 gatcataggc tcaattctcg caattttttg agattttttt caatttctcg caaggtcgcc
     2701 aacacgctaa caaggtcaat gctcggcttt tgactgttgc attgtcgggc gatttggttc
     2761 aggtttacgc ctatgcggtt cagctcgaac agtaacgcag ggtcgattac tttcggctgt
     2821 cgcttaggtt gctgttctag ggcaacttcc cgaacccact ccgcaagcct tgctttcgtt
     2881 tttctctcta acaaggcttg atactcgttt tcggtgagcc tgatttttat ctctttctca
     2941 cgtttcataa tggtgtccgt tcttctattt tgaccgctga aagcggtcgg gggtcaaggg
     3001 ggcaaagccc ttttgcaagg tcaaaaagga aactcgaaga gtaccctttt tgtgtccttg
     3061 ctattaaaaa agacaatagt acaccaaaag ccccgagagt gatatataaa aatcagcgga
     3121 gccgataggc gacttcgttt tattaggcga acatcgtgag cctttgaacc aatataaaaa
     3181 taaaaaaatt tattattagg gaagtggtta ttgtgggcgg taggttttta gtgttggaaa
     3241 gctgttggaa agctcgtggg taactcgcag agttatccat cagcttttca atggcttttc
     3301 aatacgaccc gcaggggaaa aaccgttaaa ccgtccacat taaccgctga cccaaaaaga
     3361 acgcttttta ctaaaagatt tctattcggt tctcaaatgt tgcgtgaatg gggcaacaat
     3421 aaaacgttgt ggcgtttatc agggtgggaa ttgcagactt aaacaatcaa ttccgctgta
     3481 tccttaaatc tcgcttatca ggtgtgcttg tatttcttgg ggctttcgcc tttctaaccg
     3541 tagcacgaaa cggagacaga gcttaatttt cgtattaaga acgttatcac ttctacgcct
     3601 gtttattctt ccgaagtccg agctgaagac cgtctaattt aaggtttacg tttcttgttt
     3661 acgtcgttga atggtttttt ggtagtaggg acgcttcgca atctcttgca ttactagcta
     3721 ccctttgcta tgattagatt gttcacgtct ggatcatagc aaagaacgta ctgatacaga
     3781 ttataggaaa agggatcgaa tgtcaaaagt tcgatccctt tttcttttct aaagcattgg
     3841 tattaaaggc tttaaggtgt attttattaa aatctgtaca cctttgtgaa aatccataca
     3901 cctttcttac cgtgtaattt tatgaaaatt cgtgcacctt tctgctaacg ccctgcggtt
     3961 gttagactaa aaaagccatt gaaagcaagt ttcaacggct ttttcagtcc cgaataaaac
     4021 aaaaccgcct tgttaggcgg ttatgtgtta aaatcacttt cgcactatgg cggcggctcg
     4081 cactaccgtt catagtgtga gcctagtcgc ttagccttat agtgctaagg gggtgattta
     4141 tgtgaaacct ctacgaattg gggcaagggt tatttatccg cttcaagact tagacaagca
     4201 aattgcatac ctagaggcga acttacttga gaatatcaaa gtgcatttca ttgtagaaag
     4261 cattgagatt aaaggctaaa ttgctagact tttgcgctta aattcgccaa aatctgtttt
     4321 tttgttctac aaacaaatta tccgaatttc cgcgcaatgt acgtttcagg ctgcctgaaa
     4381 agaaatttat ttagtaaaat caaaggataa tttatgttaa ataagttaaa aatcggcaca
     4441 ttattattgc tgacattaac ggcttgttcg cccaattctg ttcattcggt aacgtctaat
     4501 ccgcagcctg ctagtgcgcc tgtgcaacaa tcagccacac aagccacctt tcaacagact
     4561 ttggcgaatt tggaacagca gtatcaagcc cgaattggcg tttatgtatg ggatacagaa
     4621 acgggacatt ctttgtctta tcgtgcagat gaacgctttg cttatgcgtc cactttcaag
     4681 gcgttgttgg ctggggcggt gttgcaatcg ctgcctgaaa aagatttaaa tcgtaccatt
     4741 tcatatagcc aaaaagattt ggttagttat tctcccgaaa cccaaaaata cgttggcaaa
     4801 ggcatgacga ttgcccaatt atgtgaagca gccgtgcggt ttagcgacaa cagcgcgacc
     4861 aatttgctgc tcaaagaatt gggtggcgtg gaacaatatc aacgtatttt gcgacaatta
     4921 ggcgataacg taacccatac caatcggcta gaacccgatt taaatcaagc caaacccaac
     4981 gatattcgtg atacgagtac acccaaacaa atggcgatga atttaaatgc gtatttattg
     5041 ggcaacacat taaccgaatc gcaaaaaacg attttgtgga attggttgga caataacgca
     5101 acaggcaatc cattgattcg cgctgctacg ccaacatcgt ggaaagtgta cgataaaagc
     5161 ggggcgggta aatatggtgt acgcaatgat attgcggtgg ttcgcatacc aaatcgcaaa
     5221 ccgattgtga tggcaatcat gagtacgcaa tttaccgaag aagccaaatt caacaataaa
     5281 ttagtagaag atgcagcaaa gcaagtattt catactttac agctcaacta acaaattcag
     5341 catg
//
LOCUS       DANLTI010000149         5314 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.150, whole genome shotgun sequence.
ACCESSION   DANLTI010000149 DANLTI010000000
VERSION     DANLTI010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5314
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.150"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(18..1301)
                     /locus_tag="PXB09_002399"
     CDS             complement(18..1301)
                     /locus_tag="PXB09_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5234459.1"
                     /translation="MTACHEPKRSIWQQIFTKNMLLCVYTGFCSGLPLFVLIQLMPAW
                     LTSANLDIKTIAAFTLTSLPYTWKFLWAALLDRYFPPFLGRRKSWIFISQIGLLVILA
                     SFGLFNPVQDISIIVTLSVLLAFLSATQDIVVDAFRREILSDNELGLGNSIHVNAYRI
                     AGLIPGGLSLFLADHYAWDTVFLITAAFLVPCLFVTLIIAAEPNHKPIDRSKPFYMAF
                     VDPFKEFFTRKGVAGAIGLILFIFLYKLGDSLATTLQTKFILDMGFTKSHIAGIVKIT
                     SLWCSIGGGIIGGVAMLKLGVNRALWLFGFVQLITILGFAYLASFEHFPTESIGAAEL
                     WKLGLVMAGEYLGVGLGTAAFVAFMARETNPAYTAMQLAIFTSLAALPSKMLGAYTGH
                     LVEMMGYYQFFWLCFFIGIPGMLMLFKVAPWGQAE"
     gene            1467..5183
                     /gene="metH"
                     /locus_tag="PXB09_002400"
     CDS             1467..5183
                     /gene="metH"
                     /locus_tag="PXB09_002400"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5234460.1"
                     /translation="MNTQHRTELLQNALTERILILDGAMGTMIQKYKLTESDFRGERF
                     KNSTIDLKGNNDLLTLTQPLLISAIHEKYLAAGADIIETNTFSATTIAQADYELESIA
                     YELNLVGAKLARLAADKFSIPEKPRFVAGILGPTNRTCSISPDVNDPGFRNITFMQLV
                     EAYAEATRGLIEGGADLIMIETIFDTLNAKAAVFAIETVFDELGVKLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAKPLTFGLNCALGPKELRPYVEMMSKISETFVSVHPNAG
                     LPNAFGGYDLGAEEMATYIKEWAELGWLNIVGGCCGTTPEHIQAFAEATKGVAPRKLP
                     EIPTAMRLSGLEPLTIDDNSLFVNVGERNNVTGSAKFKKLIKEEKFAEAIEIAISQVE
                     NGAQVIDVNMDEALLDSKKCMTRFLNILATEPEAAKVPIMIDSSKWEVIEAGLQTVQG
                     KPIVNSISLKEGEEKFIHQAKLCRRYGAAVVVMAFDEVGQADTEERKVEICTRAYRIL
                     VDQLGFPPEDIIFDPNIFAIATGIEEHNNYGVDFIQACERIKRDLPHAKISGGVSNVS
                     FSFRGNNVVREAIHAVFLYYAIKAGMDMGIVNAGQLAIYDDLDPELREAIEDAVLNHR
                     HDTTDRLLEISEKYRGVKVESADESAAEWRNLPVAERLKHALVKGITTYIIEDTEEAR
                     QQFASPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPYINATKQ
                     KGSSNGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGVMVPADVIIETAIREKAD
                     LIGLSGLITPSLDEMEYFLGEMNRLKLDIPVLIGGATTSKEHTAIKLYPKYNYPVVYT
                     ANASRCVTVCATLMNPEAKAEFWEKTKAEYEEIQRKFAVRKPLRNGLSIEEARANRFD
                     GFSGEWADYVPPTPKQTGIIEYKNVPIATLRKFIDWSPFFMLWGLMGGYPDAFDYPEG
                     GEEARRVYNDAQRVLDEFEQNGKLNPSGIMGIFPAVREGDDIAILNEDRTACIGKSYH
                     LRQQSERGKNSKSPYNLCLSDFIADRESGQQDWFGMFAVCAGIEEHYLVESYKAAGDD
                     YNAILLQAVGDRLAEAMAEYLHFELRTKVWGYTVEDEDNGRLIREEYIGIRPAPGYPS
                     CPEHTEKQIIWDLLEVEQRIGMKLTESYAMWPAASVCGWYFTHPTSNYFTLGKIDEDQ
                     VLDYAKRKGWDELTAKKWLSVAMKQDVKSQAENI"
BASE COUNT         1557 a         1226 c         1294 g         1237 t
ORIGIN      
        1 cttattttta tgaatagcta ttcagcttgt ccccaaggag caaccttaaa caacattagc
       61 attcccggaa taccaataaa gaaacagagc cagaagaatt ggtaatagcc catcatttcc
      121 actaaatgcc ctgtgtatgc ccctaacatt ttgcttggta gggcagcaag gctggtgaaa
      181 atggcgagct gcattgcagt gtaagcggga ttagtttcac gagccataaa ggcaacgaaa
      241 gccgctgtgc ctaaacccac gcccagatat tcacctgcca tcactaagcc taatttccaa
      301 agctcggcag ctccaatgct ttcggtaggg aaatgctcaa aactggcaag gtaagcgaag
      361 cctaaaatag taattaattg tacaaatccg aacagccata aggctcggtt aacgcccaat
      421 ttcaacattg ccacgccacc aataataccg ccgccaatgc tgcaccaaag tgaagttatt
      481 ttcacaatgc cggcaatgtg cgatttagta aaacccatat ccaaaataaa tttggtttgt
      541 agcgtagttg caagggaatc gcctaattta tataggaaaa taaatagaat cagcccaatc
      601 gctcctgcca cgcctttacg ggtgaaaaac tctttgaacg gatcgacaaa cgccatataa
      661 aacggcttag aacggtcgat tggcttatga ttcggctcgg cagcgattat tagcgtaacg
      721 aataagcaag gcactaaaaa agcagcggta atcagaaata cggtatccca cgcatagtga
      781 tcggctaaaa ataatgaaag cccacccgga atcagccctg caatacgata agcattaacg
      841 tggatagagt tacctaaccc gagttcgtta tccgataaaa tttcacgccg aaaggcatcc
      901 accacaatgt cttgcgtggc ggaaagaaaa gctaatagca cagaaagagt aacaataatt
      961 gaaatatctt gcactgggtt gaacaagcca aagctggcta aaatcaccaa tagcccgatt
     1021 tgtgaaatga aaatccagct tttgcgtctg cctaaaaaag gtggaaagta gcgatctaac
     1081 aatgcagccc acaggaattt ccacgtgtag ggcaaagagg tcagggtgaa ggcggcaata
     1141 gttttaatat ctaaattggc actggttagc caagccggca ttagctgaat taacacaaac
     1201 aacggtaaac cggaacaaaa gccggtgtaa acacaaagca acatattttt agtaaaaatc
     1261 tgttgccaga tagagcgttt gggttcgtga caagcggtca tatttttcct acattttgca
     1321 aaataaaaag gggaagaact gagccaatat agcataattt taaaggcgac tctaaccctt
     1381 tccatttcgt cacagataag gtttgacagc cttgcgacat atttctatta ttccttttaa
     1441 tcaaactaaa aaactggaag cagagtatga acacgcagca tagaaccgaa ttacttcaaa
     1501 atgcccttac cgaacgcatt cttatcttag acggtgcgat gggaacgatg atccaaaaat
     1561 ataaactaac cgaatctgat ttccgaggtg aacgttttaa aaacagtacc atcgatctta
     1621 aaggcaataa cgacctactc acactcaccc agccactcct gatttctgct attcacgaga
     1681 aatatttagc cgccggtgcg gatattatcg aaactaatac ctttagtgcg acgaccattg
     1741 ctcaagcaga ttatgaactt gaaagtattg cttatgagct gaatcttgtg ggggcaaaac
     1801 ttgcccgtct tgccgccgat aaattctcca tccctgaaaa acctcgtttt gttgccggta
     1861 ttcttgggcc gactaaccgt acttgttcga tttcccctga tgttaatgac cccggtttcc
     1921 gtaacattac ctttatgcaa ctggtggaag cctatgccga ggcaacccgt ggtttgattg
     1981 aaggtggggc ggatctgatt atgatcgaaa ccattttcga taccctgaat gccaaagcgg
     2041 cggtgtttgc aattgaaacg gtgtttgatg aactgggcgt gaaattgccg ataatgatct
     2101 ccggcaccat taccgatgcc tcagggcgaa cgctgtcagg gcagaccacg gaggcgtttt
     2161 ataactcgct ccgccacgcc aaaccgctga cgttcggctt gaactgtgcg ctcgggccga
     2221 aggaactccg cccttatgta gagatgatgt cgaaaatcag tgagactttt gtttcggttc
     2281 acccgaatgc cggcttgcca aacgcttttg gcgggtacga tttaggggcg gaagagatgg
     2341 cgacttacat caaagagtgg gcagaactcg gctggctgaa tattgtcggc ggctgttgtg
     2401 gcaccacgcc ggagcatatc caagcctttg ccgaagcaac caaaggcgtt gcgcctcgta
     2461 aattacctga aattccaacc gctatgcgtt tgtcgggctt agaaccgctg acgattgacg
     2521 ataattcgct gtttgtgaat gtgggcgaac gcaataacgt caccggttcg gcaaaattta
     2581 agaagctgat taaagaagaa aaatttgcgg aagcgattga aattgccatc agccaagtgg
     2641 aaaacggggc gcaggtgatt gacgtgaata tggacgaggc gttgctcgat tccaaaaaat
     2701 gtatgacccg tttcctcaac attcttgcta ccgaacctga ggcggcaaaa gtgccgatta
     2761 tgattgactc ctcgaaatgg gaggtgatcg aggcgggctt gcaaacggtg cagggcaagc
     2821 cgatagtgaa ctccatttca ctcaaagagg gcgaagagaa atttattcac caagccaaac
     2881 tctgccgccg ctatggggct gcggtggtgg tgatggcatt tgacgaagtc gggcaagcgg
     2941 ataccgaaga acgcaaggta gaaatttgta cccgagctta tcggattttg gttgatcagc
     3001 tcggcttccc accggaagac attattttcg acccgaacat ttttgcgatt gccaccggta
     3061 ttgaagaaca caataactac ggcgtggatt ttatccaagc ctgtgagcgg attaaacgag
     3121 acttgccaca cgccaaaatt tccggcgggg tgtcgaatgt ctctttctct ttccgaggca
     3181 acaatgtggt gcgtgaggct attcacgccg tgttcctcta ctatgcgatc aaagccggaa
     3241 tggatatggg gatcgtgaac gcagggcagt tggcgattta tgacgacctc gaccctgaac
     3301 tgcgagaggc gattgaagat gcggtgctga accaccgtca tgacactacc gaccgcctgt
     3361 tggaaatttc cgaaaaatat cggggcgtaa aagtagaaag tgccgatgaa agtgccgccg
     3421 agtggcgaaa tttacctgtg gcagagcgtt taaaacacgc cctcgtaaaa ggcataacga
     3481 cctacattat tgaagatacc gaagaggctc gccagcaatt tgcctctccg ctggaagtga
     3541 ttgaagggcc gctcatggcg ggtatggacg tggtgggcga cctgttcgga gacggcaaaa
     3601 tgttcctgcc gcaagtggtg aaatcggctc gggtaatgaa acagtccgtt gcctatttag
     3661 agccgtacat caacgccacc aagcagaaag gatcgagcaa cggcaaaatg gtgatcgcca
     3721 ccgtgaaagg tgatgtacac gacatcggca aaaacatcgt tagcgtggtg ttgcagtgca
     3781 ataactttga agtgatagac ttaggcgtga tggtgcctgc cgatgtaatt atcgaaactg
     3841 ctattcggga gaaagccgat ctcattgggt taagcggact aattacccca tcgctggacg
     3901 aaatggagta ttttttaggt gaaatgaacc gcttgaagct cgatattccg gtgctgattg
     3961 gcggcgcaac gacctcaaaa gagcatacgg cgatcaaact ttatccgaaa tataactacc
     4021 ccgtagtcta taccgccaac gcttcacgtt gcgtaaccgt ctgtgcgacc ttgatgaacc
     4081 ctgaggcaaa agccgaattt tgggaaaaaa ccaaagccga atacgaagaa attcagcgta
     4141 aatttgccgt tcgcaaacca cttcgcaacg gtttatctat tgaggaggct cgagccaatc
     4201 gttttgacgg atttagtggc gaatgggcag actatgtgcc gccaacgcca aaacagaccg
     4261 gcattatcga gtacaaaaat gtaccgattg ccaccctacg caaatttatc gactggtcgc
     4321 cgttctttat gctctggggc ttaatgggcg gttatcctga tgcctttgat tatccggaag
     4381 gcggcgaaga ggcacgccgt gtctataacg atgcccaacg ggtgctggac gaatttgagc
     4441 aaaacggcaa gctcaaccca agtgggatta tgggcatttt ccctgccgtg cgtgagggcg
     4501 atgatattgc aattttaaac gaagatcgca ccgcttgtat cggcaaatcc taccacctcc
     4561 gccaacaatc cgaacgaggc aaaaacagca aaagcccgta caacctctgt ttaagcgatt
     4621 ttatcgccga ccgagaaagc ggacaacaag actggttcgg aatgttcgcc gtttgtgccg
     4681 gcattgaaga acactattta gttgaaagct acaaagcggc aggcgatgac tacaacgcca
     4741 ttttgctcca agccgttggc gaccgcttgg cagaagcaat ggcggaatac ctacactttg
     4801 agctacgtac caaagtctgg ggctacaccg tggaagacga agacaacgga cgcttaatcc
     4861 gtgaagaata catcggcatc cgccctgcgc ccggctaccc aagctgcccg gaacacaccg
     4921 agaaacagat aatttgggac ttgttagagg tggaacaacg catcggcatg aaactcaccg
     4981 aaagctatgc catgtggccg gcagcaagtg tctgcggctg gtacttcacc caccctacca
     5041 gcaactactt cactctcggc aagattgatg aagatcaggt gttggattac gccaaacgca
     5101 aaggctggga cgaactcacg gcgaagaaat ggttaagtgt ggcgatgaaa caagatgtca
     5161 agtcgcaggc tgaaaacatt taatgtagtg gcgggtttta acccgcctgt tacaagcggt
     5221 tggttttgag ataaaatatg caaaatttat ctctctttta tgcaaagaag ttatcatcga
     5281 gaacaaaaca atgattgaaa aacaaaatta tcac
//
LOCUS       DANLTI010000150         5301 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.151, whole genome shotgun sequence.
ACCESSION   DANLTI010000150 DANLTI010000000
VERSION     DANLTI010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5301
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.151"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            20..1138
                     /gene="rnd"
                     /locus_tag="PXB09_002401"
     CDS             20..1138
                     /gene="rnd"
                     /locus_tag="PXB09_002401"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDL5234461.1"
                     /translation="MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPI
                     LGLIQLFDGQQVSLIDPNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPE
                     PMLDTQVMAAFAGIGISMGFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADV
                     WYLLPVYEKLAQALTKSTWQSAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREEL
                     AILQVLAKWRIEEAQKRNLALNFVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGK
                     KILWLVEQGKAIESNDYPELIQRLVDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKR
                     QLNQLFKWYIDGKPSEKIPELLIGWRKPFGEQLLSVLS"
     gene            1195..1677
                     /gene="lrp"
                     /locus_tag="PXB09_002402"
     CDS             1195..1677
                     /gene="lrp"
                     /locus_tag="PXB09_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005695827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDL5234462.1"
                     /translation="MENKKPPKALDAIDLKILNELQRNGKISNIELSKRVGLSPTPCL
                     ERVKRLEKNNVIMGYKALLNPELLDAPLLVIVEITLVRGKPDVFEEFNKAIQQLDEIQ
                     ECHLVSGDFDYLLKTRVADMVSYRKLLGTTLLRLPGVNDTRTYVVMEEVKQTNYLLLK
                     "
     gene            1688..4348
                     /locus_tag="PXB09_002403"
     CDS             1688..4348
                     /locus_tag="PXB09_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDL5234463.1"
                     /translation="MIEQLKPHLKGKENLIKLMLLLTGFLGVYLLIAWASYSPLDNAW
                     SVASSITQTTLNKTGHFGAWSIDMLYAMFGKVAVLVPIALIIFSIYSLGMGLSVDMKW
                     KTVFIRLASFLLLMVGLAGLFSVLFSNSAYYLSGGFVGGVWETILSDTIGQFGALLIA
                     MLFTIAGLYFCSVQSLLPILTQFYEWIMAKSEESKTAESLQHLQNTEQKQPLVTENEA
                     VEVVDDHKPQFTDISAFKRPNISGLRHSENVEIDNREMYEIERDLELPTINILIQPDM
                     VNQVAEQATSGYELPNEESNVLQMPTIRLNTAIENEVDTIENSSSLEDLKIAESMLPQ
                     IQLDNDIEDTEEAIDDVREITPEFMVTPPKAMKDVSEQPAYPKGYGDTLIHPLLQRKV
                     ITEKPTTPLPTLDLLDKAPIQSQQITEQEIRETSVRLEAELANFGVKATVEDVLVGPV
                     VTRYEIQPAAGVKASKITNLASDIARGLMFKAIRITEVIPNKPYMGIETPNKHRETVW
                     LRDVLDSDEFRNTTATLPMALGKDISGEPVVVDMAKMPHLLVAGQTGGGKSVGVNTMI
                     LSLLFKLTPEQVRFIMIDPKVVELSIYNDIPHLLTPVVTDMKKAANALRWAVEEMERR
                     YLLVSHLQVRNIEGYNAKIDQAAAMNLPIPDPTWRPGDSMDSLPPPLQKLSYIVLIVD
                     EFADLMMSAGKEVEEYIMRIAQKARAVGIHLILATQRPSTDVITGVIKANIPSRIAFT
                     VASQIDSRTILDSGGAEALLGRGDMLYSGAGSPDIIRIHGAFMKDEEVQRVADNWRAR
                     GKPNYLESIVESRSEEADGKNDGGTGDLDPLFDEVVEYITETGSVSISNIQRRFSLGF
                     NRAARIVDQMEAQGIVSEPLKGGKREVLAR"
     gene            4500..>5301
                     /locus_tag="PXB09_002404"
     CDS             4500..>5301
                     /locus_tag="PXB09_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDL5234464.1"
                     /translation="MRLDDIKESKNVEDRRFNNVGRTKVGRGKGGILTFIIVLVGAYY
                     GVDLTGLMGGGVEYEEQTSALNESEEKQLRTLSAKVLTTTENIWTSYFQQNGLTYKEP
                     SLVLYRGAIQTACGTGQSAMGPFYCPVDQKVYLDLSFYDDMRKKLRASGDFAFSYVIA
                     HEVGHHVQNLLGITSKTQRAQMKASSKAEANQISVNVELQADCFAGVWGHQLAKANRL
                     EEGDVEEAFNAAQAVGDDRLQQQSRGYVVPDSFTHGSSAQRLAWFRKGL"
BASE COUNT         1669 a          956 c         1205 g         1471 t
ORIGIN      
        1 aatatttcag gaaaagtata tggagtcttt gattcactac caatgggttg aaacaaatga
       61 gcaattagag gccgtatgtg aacaggccag aaaaacaaaa gtagttgcct tagatacaga
      121 gtttatccgt acacgtacct attatccgat attgggttta attcaactct ttgatggcca
      181 acaggttagc cttattgatc caaatacgat ttctgacttc tcgccttttg tgtcattatt
      241 agccgataaa aatatcataa aagtattaca tgcctgtagt gaggatttag aagtttttga
      301 gtatcaattt aagcaattgc cagagccgat gttggatact caggtgatgg cagcctttgc
      361 cggcattggt atttcgatgg ggtttgcaaa attggtttcc cactacttaa atattgaact
      421 agacaaaggc gcttcccgaa ccgattggct tgccagaccg ctaagcgctg aacaattaca
      481 atatgcggca gctgatgttt ggtatttatt gccagtttat gagaaattgg cacaagcatt
      541 aacaaaaagc acttggcaaa gtgctgtagc agaggagtgt gtcgctttgt tgaagaaagc
      601 gaaacagcct atcaataagg aaaaagccta taaaaatatt gccaatgctt ggcgattgaa
      661 tcgggaagag ttagccatat tacaagtatt agcgaaatgg cggattgaag aagcacaaaa
      721 gcgcaatctt gccttaaatt ttgtcgtgaa ggaggcaagt ttagttcaaa tcgcaaaaag
      781 ctgtcctaaa cacacttctt cgctgttaga atttatgcac ccaaatgaag tcagaattca
      841 cggaaaaaaa atactatggt tggttgagca aggaaaagca atagaatcga atgattatcc
      901 tgaactcatt cagcgcttgg tggatgaaaa gggttataaa tattatatgc aagcgatgtt
      961 gcaaaaatta ttagaaattc aaccgcttga tatcgtaccg gagttggttg caagtaaacg
     1021 tcaattaaat cagctattta aatggtatat tgatggaaaa ccatcagaaa aaattcctga
     1081 attattaatc ggttggcgaa aaccttttgg tgaacagctg ctatcggttt tatcttaaat
     1141 ttcattcggg ttacatagac tatgtacagt ataattgcct aaaaaggagt ttatatggaa
     1201 aataaaaaac caccaaaagc attagatgcg attgatttaa aaatcttaaa cgagctacaa
     1261 cgtaacggga aaatttctaa tattgaatta tcaaagcgag ttgggctttc tccaacgccc
     1321 tgcttagaac gggtaaaacg gctagaaaaa aataacgtaa ttatgggcta taaagcttta
     1381 cttaaccctg aattacttga tgccccttta ctggtgattg ttgaaattac tttggtgcgt
     1441 ggtaagcctg atgtatttga agaatttaat aaagcgattc aacaacttga tgaaattcaa
     1501 gaatgccacc tggtatcggg ggattttgat tatctgttaa aaacccgtgt ggcggatatg
     1561 gtatcgtacc gtaagttatt aggcacaaca ttgcttcgtt tgcccggcgt aaatgacact
     1621 cgaacctatg tggtgatgga agaagtaaaa caaaccaact atttgttgtt aaagtaagga
     1681 gaattgggtg attgaacaac ttaaaccaca cctaaaaggc aaagagaact tgatcaaact
     1741 tatgcttttg ttgaccggct ttttgggcgt ttatttgcta attgcttggg caagttatag
     1801 tccattagat aatgcttggt ctgttgcaag cagcattaca caaacaacct tgaataaaac
     1861 aggtcacttt ggtgcttgga gtattgatat gctctatgca atgtttggta aggttgcagt
     1921 tttagtacct attgcattaa ttattttctc aatttatagc ttgggaatgg gtttaagtgt
     1981 cgatatgaaa tggaaaactg tcttcattcg cctagccagt ttcttattat tgatggtcgg
     2041 tcttgccggg ttatttagcg tgcttttttc aaactcagct tattatctgt cgggtggctt
     2101 tgtcggtgga gtttgggaga caatattatc tgatactatc ggacaatttg gtgccttatt
     2161 gattgcaatg ctttttacta tagctggctt atatttttgc tctgttcaat cattattgcc
     2221 aatattaacg caattttatg agtggataat ggcaaaatca gaagagagca aaacagctga
     2281 atctcttcag catttgcaaa atactgagca aaaacaaccg cttgtaactg aaaatgaagc
     2341 ggtggaagtt gtagatgacc ataaaccgca atttaccgat atctccgcct ttaaacgccc
     2401 aaacattagt ggtttaagac actcggaaaa tgtagagata gataaccgag aaatgtatga
     2461 aattgaaaga gatcttgagc taccgactat taatatttta atacagcctg atatggttaa
     2521 ccaagttgcg gaacaagcta catcgggcta tgagttacca aacgaagaat ccaatgtatt
     2581 gcaaatgccg accattcgct taaataccgc tatcgaaaac gaggtggata caatcgaaaa
     2641 cagttcatca ttggaagacc tgaaaatagc agaatctatg ttacctcaaa ttcagcttga
     2701 taatgatatt gaagatactg aagaagctat tgacgatgtg cgtgaaatta caccggaatt
     2761 tatggtaacg ccgcccaagg cgatgaaaga tgtgtctgag cagccagcct atccaaaagg
     2821 ctatggtgat acgttaattc acccgttgtt acaacgaaaa gtgataaccg aaaaaccgac
     2881 aacaccattg ccaacgctag atttgttgga taaagcaccg attcaaagcc agcaaattac
     2941 cgaacaggaa atacgagaaa cctctgtgcg gctagaagca gaattagcaa actttggcgt
     3001 aaaagctacc gttgaagatg tattggtcgg tccggtagtg acccgttatg aaatccaacc
     3061 ggctgccggg gtaaaagcct ccaaaattac caatttagcg agcgatatag ctcgtggctt
     3121 aatgtttaaa gcgattagga ttactgaagt tatcccaaac aaaccttata tgggtattga
     3181 aactccgaat aaacaccgtg aaacagtgtg gttgcgtgat gtgctagaca gcgatgaatt
     3241 ccgcaatacc actgcaacat tgccaatggc actaggtaaa gacatcagtg gtgagcctgt
     3301 ggtggtcgat atggcgaaaa tgccacactt actggtggca gggcagaccg gtgggggtaa
     3361 atcggttggg gtgaatacga tgattttaag tctattgttc aaacttacac cagaacaagt
     3421 ccgctttatt atgattgacc ctaaagtggt ggagctttcc atttataacg atattcctca
     3481 cttattaacg ccggtagtaa ccgatatgaa aaaagccgcc aacgcactac gctgggcggt
     3541 ggaggaaatg gaacgccgtt atttgctggt aagccattta caggtgcgta atattgaagg
     3601 ctataatgcg aaaatcgacc aagcggcagc gatgaatttg ccgattccag atccaacgtg
     3661 gcgaccgggc gattcaatgg atagccttcc gcctccgcta caaaaattaa gctatattgt
     3721 gctgattgtc gatgagtttg cggatttaat gatgtctgcc ggtaaagaag tggaagagta
     3781 cattatgcga attgctcaaa aagcccgagc ggtgggaatt cacttaattc ttgctaccca
     3841 acgtccgtca accgatgtga ttaccggcgt gattaaagcc aatattccaa gccggattgc
     3901 gtttacagta gcgagccaaa ttgactcaag aactatttta gattcaggtg gagcagaggc
     3961 attattaggg cgaggcgata tgctctattc aggagctggc agcccggata ttattcggat
     4021 acacggtgcg tttatgaaag acgaagaagt gcaacgcgtg gcggataatt ggcgggcaag
     4081 aggaaaacca aactacttgg aaagcattgt ggaatcccgc tcggaagagg ctgatggcaa
     4141 aaacgatggc ggaacgggcg atttagatcc gctatttgac gaggttgttg aatatatcac
     4201 ggaaaccggt tcggtctcta tcagtaatat tcaacgccgc ttctcgcttg gttttaaccg
     4261 tgcggctaga attgtggatc aaatggaagc tcaaggcatt gtttctgagc cacttaaagg
     4321 tggcaaacga gaagtgctgg cgaggtaaaa cacatacaag cggttagatt tctgtgaaat
     4381 tttgcaaatt ttgacaaaaa tctaaccgat tgtatttatc taatgctaaa taagcatagt
     4441 ataaggctag tctttgggct aaaattaacg caatttttac atcttttaag gttgaatata
     4501 tgcgattaga tgatattaaa gaaagtaaaa atgttgaaga cagaagattc aacaatgtgg
     4561 gtagaactaa ggttggtaga gggaaaggtg gaatattaac ctttattatc gtgcttgttg
     4621 gagcttatta tggtgttgac ttaacaggtt taatgggcgg tggcgtagaa tatgaggagc
     4681 agacatcagc attaaatgaa agtgaagaaa aacagctaag aaccttatcc gctaaagtat
     4741 taacgaccac agaaaatatt tggacttcct acttccagca aaatggtcta acttataaag
     4801 agccgtcttt ggtgctttac cgtggggcaa ttcaaactgc ctgtggcacc ggtcaatctg
     4861 caatgggtcc tttctattgc cctgtcgatc aaaaggttta tttagattta tcattctatg
     4921 atgatatgcg taaaaaatta agagcatcgg gcgattttgc cttctcttac gtgattgcac
     4981 acgaggttgg ccaccacgtc caaaatttat tgggcataac aagcaaaacc caacgggctc
     5041 aaatgaaagc ctcatctaaa gccgaagcaa accaaatttc agtcaatgta gaattgcaag
     5101 ctgactgttt tgccggcgtt tggggacacc aactcgcaaa agccaaccga ttagaggaag
     5161 gcgatgtgga agaagccttt aatgctgccc aagcagttgg agatgaccga ttacagcaac
     5221 aaagtcgtgg ctatgtcgtg ccggatagct tcacccacgg ctcatctgca cagcgtttgg
     5281 cttggtttag aaaaggttta a
//
LOCUS       DANLTI010000151         5065 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.152, whole genome shotgun sequence.
ACCESSION   DANLTI010000151 DANLTI010000000
VERSION     DANLTI010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5065
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.152"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..267
                     /locus_tag="PXB09_002405"
     CDS             <1..267
                     /locus_tag="PXB09_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234465.1"
                     /translation="TQKNYMIHEDFFYKNNNKLHMDKTKITLEKGDKVTYYMICGKKL
                     FENTETFVLEIENNKYQIPNKYINNIQNYENKNSQPNNASKCNS"
     gene            218..703
                     /locus_tag="PXB09_002406"
     CDS             218..703
                     /locus_tag="PXB09_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDL5234466.1"
                     /translation="MKIKTLSLIMLLSVTVNAAPVELHQFDSPKQESDYRALIQELRC
                     PQCQNNNIADSNATIATDMRAKTLELLKQGKSKDEVVDYMIERYGNFVTYDPPLTPAT
                     IMLWLLPLILIALGLGVVLRRKKNKPQAVNFEQNTAKPTTHLAQDEQERLNQILNKEE
                     K"
     gene            700..1611
                     /gene="ccmI"
                     /locus_tag="PXB09_002407"
     CDS             700..1611
                     /gene="ccmI"
                     /locus_tag="PXB09_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HDL5234467.1"
                     /translation="MNFWLAIIFVTLIVCGVAFYPLLKKNKQIDNTKRDSLNKAFYFD
                     RLKEVENEANEGVIDDPEQTKLELQKNLLDDIPHSTQSATSEKLTLGKSWFVALILFV
                     GGISFAIYSNVGSWFSNSMLDTTHQKLDSFYERLKTEETNPLSQEEMNQFAMALRVDL
                     QSNPNDDKKWYMLGQIGMALDDGQLAHDAFSKAAQLKPDNLDYKLSHAQLLLFSEAQE
                     DKKQGETLLKEIIRQDHTNFNALSLLAFHSFEKEDFKMAAMTWGMMLKLLPDEDPSKV
                     TVERSFNMALSNLSEAEKQELQKGEKK"
     gene            1608..2213
                     /gene="mog"
                     /locus_tag="PXB09_002408"
     CDS             1608..2213
                     /gene="mog"
                     /locus_tag="PXB09_002408"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDL5234468.1"
                     /translation="MTACKPLSKEKLKIGLVSVSDRASQGVYSDQGIPELRAWLESAL
                     TEPFELETRLIPDEQAIIEQTLIELVDAHACHLVLTTGGTGPAKRDVTPDATLAVAHR
                     EMPGFGEQMRQVSLHFVPTAILSRQVGVIRHDSLILNLPGQPKAIKETLEGVKDEQGK
                     VLVKGIFSAVPYCLQLLSEIYVETHAAICESFRPKSARREN"
     gene            2223..2561
                     /gene="glnB"
                     /locus_tag="PXB09_002409"
     CDS             2223..2561
                     /gene="glnB"
                     /locus_tag="PXB09_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDL5234469.1"
                     /translation="MKKIEAIIKPFKLDDVREALTDVGVSGMSITEIKGFGRQKGHTE
                     LYRGAEYAIDFLPKVKVEIVIPDELEEQCIEAIMETAQTGKIGDGKIFVYDVGRVIRI
                     RTGEENEEAI"
     gene            2642..3121
                     /gene="lspA"
                     /locus_tag="PXB09_002410"
     CDS             2642..3121
                     /gene="lspA"
                     /locus_tag="PXB09_002410"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDL5234470.1"
                     /translation="MKTGLKFLWVSLIVIIIDLWSKYIVVQHFEFGESINILPIFNFT
                     YARNYGAAFSFLADHSGWQKYFFLGLAVVISSALVVALWKNQAVKKLENIAYALIIGG
                     AIGNAIDRAYNGYVVDFLHFYWDIYHYPVFNIADIAICVGAGLLILEAFITKKEPKK"
     gene            3132..4076
                     /gene="ispH"
                     /locus_tag="PXB09_002411"
                     /gene_synonym="lytB"
     CDS             3132..4076
                     /gene="ispH"
                     /locus_tag="PXB09_002411"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDL5234471.1"
                     /translation="MKILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNKF
                     VVDGLKAKGAIFVEELHEVPDDAIVIFSAHGVSQVVRQEAKNRGLKVFDATCPLVTKV
                     HMQVARASKKGTKAILIGHEGHPEVIGTMGQYNNQEGGIYLVESVEDIANLPVSNNDE
                     LTFMTQTTLSIDDTIGVIEALKEKYPAIQGPRKNDICYATTNRQHAVRELAEQSQLVL
                     VVGSKNSSNSNRLAELASRMGVMSKLIDGPQDIDPTWLEGIETIGITAGASAPEVLVQ
                     SVISHLKTLGVTEVETLVGNEEDVVFEVPKELRIKEVK"
     gene            4076..4324
                     /locus_tag="PXB09_002412"
     CDS             4076..4324
                     /locus_tag="PXB09_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDL5234472.1"
                     /translation="MTEINRFKLEWACRRGMRELDKMIMPFYQNHFNELNETQQQAFV
                     EMLNYSDPELFRWVMLQAPAPTEEIAELIRLMRDKIET"
     gene            complement(4531..>5065)
                     /locus_tag="PXB09_002413"
     CDS             complement(4531..>5065)
                     /locus_tag="PXB09_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5234473.1"
                     /translation="SNHSNQSANQYIFNSDWFTHNVPSLASIFEYVKPRRILEIGSFE
                     GRSSVFFIEEALKYQSQVEIHCIDSWEGGAEHQGVWDMGEIEQRFIHNVTLAQQKFQN
                     VVLYKHRGYSHQKMIELLANGYINYFDYIYIDGSHEAPDVLFDALLAHRLVRKGGVIS
                     FDDYLWSPDETGKQRHY"
BASE COUNT         1632 a         1004 c         1076 g         1353 t
ORIGIN      
        1 acgcagaaaa actatatgat acatgaagat tttttctata aaaataacaa taaacttcac
       61 atggacaaaa ctaagataac actagaaaaa ggagataagg ttacttatta tatgatctgt
      121 ggaaaaaagc tatttgaaaa cacagaaact tttgtactgg aaattgaaaa taacaaatat
      181 caaattccta ataaatatat caacaatatt caaaattatg aaaataaaaa ctctcagcct
      241 aataatgctt ctaagtgtaa cagttaatgc tgctccggta gaactgcacc aattcgacag
      301 cccgaaacaa gagtcggact atcgtgcctt aattcaagaa ctgcgttgcc cgcagtgtca
      361 aaataataat atcgccgatt ccaatgcgac tattgccacc gatatgcggg caaaaacctt
      421 agaattgctc aaacaaggca aaagcaaaga cgaagtggtg gattatatga ttgaacgcta
      481 cggcaatttc gtcacttacg acccgcctct cacaccggca accattatgt tatggctgtt
      541 gccgttaatt ttaattgcct tagggctggg ggtggtgttg cgtagaaaga aaaacaaacc
      601 acaagcggtc aattttgagc aaaatactgc aaaaccgacc actcatctcg ctcaagatga
      661 gcaagaacgt cttaaccaaa ttctcaataa ggaagaaaaa tgaatttctg gctggcaatt
      721 attttcgtta cactgattgt atgtggcgtg gcgttttatc cgttacttaa aaagaacaag
      781 caaatcgata acaccaagcg agacagctta aacaaagcct tctattttga ccgcttaaaa
      841 gaagtggaaa acgaagcgaa tgaaggggtg attgatgacc ctgaacaaac caaattagag
      901 ctacaaaaaa acttgcttga tgatattcca cacagcacac aaagtgccac aagtgaaaaa
      961 ttaacgctcg gcaagtcgtg gtttgtggca ttgattttat ttgtcggcgg tatcagcttt
     1021 gcgatttaca gcaatgtcgg ttcttggttc tccaactcaa tgttagacac cactcaccaa
     1081 aaattagaca gcttctatga gcgtttaaaa accgaagaga ccaatccgct ctcacaagag
     1141 gaaatgaacc aatttgcgat ggcattacgg gtagatttac aaagtaatcc gaatgacgac
     1201 aaaaaatggt atatgctcgg tcaaatcggg atggcgttag atgatggtca gcttgcacac
     1261 gatgccttta gcaaagcggc tcaactcaag ccggataact tagattacaa actcagccac
     1321 gcccaactgc tgctcttttc cgaagcacag gaagacaaaa aacagggtga aaccttgtta
     1381 aaagagatta tccgccaaga ccacacaaac tttaatgcgt taagtttatt ggcgttccac
     1441 tcctttgaaa aagaagattt caaaatggcg gcaatgacgt ggggaatgat gttaaaacta
     1501 ctgcctgatg aagatcctag caaagtaacg gtagaacgca gttttaatat ggcgttatcc
     1561 aatttaagtg aggcggaaaa acaagaattg caaaaaggtg agaaaaaatg accgcttgta
     1621 aaccacttag caaagagaag ttgaaaatcg gcttggtgtc ggtttcagac cgagcctcgc
     1681 agggggttta ttcagaccaa ggcattcccg aattaagggc gtggcttgaa tctgccttaa
     1741 ccgagccgtt tgagctggaa acccgcttaa ttcccgatga gcaagccatt attgagcaaa
     1801 ccttaatcga gttagtcgat gctcacgctt gccatttggt attaaccacc ggcggcaccg
     1861 gcccggcaaa acgtgatgtc accccagatg ccacccttgc tgtcgcccac cgagaaatgc
     1921 ccggctttgg cgaacagatg cgacaagtga gccttcactt cgtgccaacc gccattctct
     1981 ctcgccaagt gggagtaatt cgccacgaca gtctgatttt aaatctgccg gggcaaccga
     2041 aagcaattaa agaaacgctg gaaggtgtga aagatgaaca gggcaaagta ttggttaaag
     2101 gtatttttag tgccgtgcca tactgtttac aacttttaag cgaaatttat gtcgaaaccc
     2161 acgcagctat ttgcgaaagt ttcagaccca aatcggcaag acgagaaaat taaggctaaa
     2221 aaatgaaaaa aatagaagca attattaaac cttttaaatt agacgatgtg cgtgaagcct
     2281 taaccgatgt gggtgtcagc ggaatgagta ttaccgaaat caaagggttt ggcagacaaa
     2341 aaggacatac cgagctttat cgtggggcgg aatatgcgat tgattttcta ccgaaagtga
     2401 aagtcgaaat cgtgattccc gacgagttgg aagaacagtg cattgaagca attatggaaa
     2461 ccgcccaaac cggcaaaatc ggcgatggca agatttttgt gtatgatgtc gggcgggtga
     2521 tccgcattcg taccggcgaa gaaaatgaag aagcgattta gttttgcaaa aaatccggca
     2581 aaaacgaccg cttgcagggg gatttccatc tactcttttt acattaaatt ttggatatta
     2641 aatgaaaaca ggcttaaaat ttctttgggt gagtttaatt gtaatcatca ttgacctttg
     2701 gtcaaaatac attgtagtgc aacattttga atttggtgaa agcattaata ttttgccgat
     2761 ttttaacttc acttacgccc gaaactacgg ggctgccttt agtttccttg ccgaccattc
     2821 cggctggcaa aaatatttct ttttagggct ggcggtagtg atttccagtg ctttagtggt
     2881 ggctctttgg aagaatcaag cggtcaaaaa attagaaaat attgcgtatg ccttaattat
     2941 tggtggagcg attgggaatg ccattgaccg tgcttacaac ggctatgtag ttgatttcct
     3001 tcatttttat tgggatattt atcactaccc tgtgtttaat attgccgata ttgcgatttg
     3061 tgtgggtgca ggcttactga ttttagaagc ctttataacc aaaaaagaac cgaaaaaata
     3121 agagtgatta aatgaaaatt ttattagcaa acccacgcgg tttttgtgcc ggcgtggatc
     3181 gagccatttc gattgttgaa ttagccttag aaattcacgg tgcacctatc tatgttcgcc
     3241 acgaagtggt acataacaaa tttgtggtgg atggcttgaa agccaaaggg gctatttttg
     3301 ttgaggagct acacgaagtg ccggacgatg ctatcgtgat cttctcagcc cacggggtgt
     3361 cgcaagtagt tcgccaagaa gccaaaaatc gtggcttaaa agtgtttgat gccacttgcc
     3421 cactcgtgac caaagtgcat atgcaggttg cccgagccag taaaaaaggg acaaaagcaa
     3481 ttttaatcgg tcacgaaggt caccctgaag ttatcggcac aatgggacaa tacaataacc
     3541 aagaaggtgg catttatttg gtagaatcgg tggaagatat tgccaacttg ccggtttcca
     3601 acaacgatga attaactttt atgacgcaaa ccacactttc cattgacgat accattggcg
     3661 tgattgaggc gttaaaagag aaatatccgg caattcaagg ccctcgcaaa aatgatattt
     3721 gttatgctac caccaatcgc caacacgcag tgcgggaact ggcagaacaa tcacaattag
     3781 tgttagtggt aggttcaaaa aactcctcga actcaaatcg tttggcggaa ctcgcctctc
     3841 gaatgggtgt gatgtcaaaa ctgattgatg gtccgcaaga tattgatcca acttggttgg
     3901 agggtattga aactatcggt attaccgccg gtgcttccgc tcctgaagtg ttggtgcaat
     3961 cagtaatttc gcatttaaaa acccttggcg taaccgaagt tgaaacctta gtcggcaacg
     4021 aagaagacgt ggtgtttgaa gtcccgaaag agttacgcat caaagaggta aaataatgac
     4081 agaaatcaac cgctttaaat tagaatgggc gtgccgacgt ggtatgcgtg agttagacaa
     4141 aatgattatg ccgttttacc aaaatcattt taatgaactc aatgaaaccc aacagcaagc
     4201 tttcgttgaa atgctcaatt acagcgaccc ggaactgttt cgctgggtaa tgctgcaagc
     4261 acctgcccca accgaagaaa tcgctgaatt gattaggtta atgcgagata aaattgagac
     4321 ctagagctaa tagattaacc tcttctttgg ggtaaatata tagctactta ccccaaagaa
     4381 gactaaattc attcaacttt tacaaaataa ccctaaacta gaaaagttaa tcttccaatt
     4441 taataatatg ttgctgataa gctattaaac cttgtattac atgcactttc tgctgatagg
     4501 tattgacata gtgatcaaca gcgggtttta ctaataatga cgctgtttac ctgtctcatc
     4561 tggtgaccaa aggtaatcat caaaactaat aacgcctcct tttctcacta aacgatgtgc
     4621 aagtaaagca tcgaacaaca catctggcgc ttcgtgagat ccatctatgt aaatatagtc
     4681 aaaataattt atatatccat ttgcgagaag ttcaatcatt ttttggtgag aatagccacg
     4741 gtgcttatat aacacaacat tttggaattt ctgttgcgca agagtgacat tatggataaa
     4801 tcgttgttct atttctccca tgtcccaaac tccttgatgc tctgctcccc cttcccaact
     4861 atcaatacaa tgaatttcaa cttgtgattg atatttcaat gcttcttcaa tgaaaaagac
     4921 agatgatcta ccttcaaatg atccaatttc taaaatcctc cgaggtttta catattcaaa
     4981 aatagaagct aatgaaggaa cattatgagt aaaccaatca gagttaaaaa tatattggtt
     5041 ggctgactgg ttggaatggt tggaa
//
LOCUS       DANLTI010000152         5056 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.153, whole genome shotgun sequence.
ACCESSION   DANLTI010000152 DANLTI010000000
VERSION     DANLTI010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5056
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.153"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(44..595)
                     /locus_tag="PXB09_002414"
     CDS             complement(44..595)
                     /locus_tag="PXB09_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234474.1"
                     /translation="MKGIMKSILVFSTAVFLAACSSNKSGWTRLNDNDVDQKSYAIAY
                     GATAQTYADRVNESYDINSFMNGVNDWYTKKVTLPIEQIRAITINRMLDHNVYAYYSG
                     VIYAADLQANFNHLDPNCWGLVQPASMTQGIHDAMLDLQKNKVRGDEYIKNGVEQILH
                     LCVKTIAEDENESQSKGKTKKHK"
     gene            688..1539
                     /locus_tag="PXB09_002415"
     CDS             688..1539
                     /locus_tag="PXB09_002415"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDL5234475.1"
                     /translation="MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEF
                     PLVTTRRSYWKAAIAELLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGED
                     DMGLVYGAVGRNFPKPDGGSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPC
                     LHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIV
                     NAHIYEDQLELMRDVQLKREPLNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPA
                     IQYPFSV"
     gene            complement(1593..2036)
                     /gene="lysM"
                     /locus_tag="PXB09_002416"
     CDS             complement(1593..2036)
                     /gene="lysM"
                     /locus_tag="PXB09_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HDL5234476.1"
                     /translation="MGLFDFVGDIGRKLFNKEEDASKAVTEHLAEDNPGVENVNVTVE
                     NGVAKISGIASTAAAVEKAVLMAGNVAGITEVNIDEVTLPDDVQLASDDELYVIQKGD
                     TLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQKIRIPKGL"
     gene            2275..2712
                     /locus_tag="PXB09_002417"
     CDS             2275..2712
                     /locus_tag="PXB09_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDL5234477.1"
                     /translation="MKQVQFYLLSQADAAELSAAEMQACELAAQAWRLGKRVLIACET
                     EQQALNIDEALWARDPDSFVPHNLSGEITTYPTPIEISWKGKRNAQRRDLLISLQTQL
                     PEFIGSFTQIIDFVPVEETAKAQARDRYKQYRQLGWQLETIQC"
     gene            2706..3149
                     /locus_tag="PXB09_002418"
     CDS             2706..3149
                     /locus_tag="PXB09_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5234478.1"
                     /translation="MLKNLSWRAKRFDELSTQELFEIYHARTAVFVVEQNCPYQEVDN
                     KDLQAVHFFTKNAKNLTAYCRLIPANDGVHIGRVLVVKENRGSGLARELVQKAMDYCG
                     EHFPAQPIHAQAQSYLQGFYESFGFKAVSEVYLEDGIAHLDMVLE"
     gene            3146..3888
                     /locus_tag="PXB09_002419"
                     /pseudo
     CDS             3146..3888
                     /locus_tag="PXB09_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            3890..4060
                     /locus_tag="PXB09_002420"
     CDS             3890..4060
                     /locus_tag="PXB09_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234479.1"
                     /translation="MTSREELLKKQRELDILFTAWFEEKKKHEVLTYRRENGDLIQHY
                     PDGTEKVIEYAQ"
     gene            4050..4643
                     /locus_tag="PXB09_002421"
     CDS             4050..4643
                     /locus_tag="PXB09_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234480.1"
                     /translation="MHNNLAIFYCGTNGAGKSTLRSFNQDKVEIVIDSDNIAMQINPL
                     NPRLADIEAGRKAIELFQFAVKNQVAFSMESTLSGKSILKRMENAKAGYFKTRLNYIG
                     VDSYKINIARVKARVKAGGHFIDEETIRKRYHISRENLIEAIFINDETLIYDNSETKP
                     NLILQIADKKVIKISDKIPNWCNQLCDELVELGFKTT"
BASE COUNT         1625 a          993 c          957 g         1481 t
ORIGIN      
        1 cggtaaaatt ttttaaaaat tttaccgctt gtcatagctt aacttattta tgctttttgg
       61 ttttaccttt agattgcgat tcattttcat cttcagcaat cgtttttaca caaaggtgca
      121 atatttgctc aaccccattt ttgatatact catctccacg aactttgttc ttctgtaaat
      181 ctaacatcgc atcgtgaatg ccctgggtca tactcgctgg ttgaacaagc ccccaacaat
      241 taggatctaa atgattgaaa tttgcctgca aatctgcggc ataaatcaca ccactataat
      301 aagcatacac attatggtct aacattcgat taatcgttat tgctctaatt tgctcaattg
      361 gcaatgtaac ctttttagtg taccaatcat ttaccccatt cataaaggaa ttgatatcat
      421 agctttcatt tactctatcc gcataagtct gagccgttgc accataagca atagcataag
      481 atttctgatc aacatcatta tcatttaaac gtgtccaacc gcttttattc gatgaacaag
      541 ctgctaaaaa aacagcggtg gaaaaaacca gaatggattt cattatacct ttcatatcca
      601 taactcctta ttgtgttgtg tcataaagtt ttagctattt taccgaataa atggcaaaat
      661 tacctaaaat tttttatgag gtaaataatg aaacagtatt tagacttatg taaccgcatc
      721 gttagcgaag gcaaatgggt tgcaaatgaa cgtacaggca aacactgcct cacagtcatt
      781 aatgctgact taacttatga cgtagaaaaa ggagaatttc ctttagttac cactcgccgt
      841 agttattgga aagctgcgat tgccgaactt ttaggctata ttcgaggcta tagtaatgct
      901 gctgatttcc gtcaattagg cacaaaatcg tgggacgcta atgcaaatga aaatgcacaa
      961 tggcttgcta atccctatcg aaaaggggaa gatgatatgg gcttggttta cggcgcagta
     1021 gggcgtaatt tcccgaaacc agacggtggc tcagtcgatt tattgcgaca aattgtggac
     1081 gatttgaaaa aaggaattga taaccgtggt gaaatttata ccttctacca ccccggcgct
     1141 ttccatatgg gctgcttacg tccttgttta cacagccatc atttttctct acttgatggc
     1201 acgctttacc tgaatagtac tcagcgttcg gcagatgtac cgcttgggtt aaattggaat
     1261 atgattcaat gctatacctt tttagcttta atggctcaaa ttacagggca taaggcagga
     1321 caagcgttcc ataaaattgt caatgcgcat atttatgaag atcaactaga attaatgcgt
     1381 gatgttcaac ttaagcgaga accactcaat gcacctaaat taatcattaa tcctgatata
     1441 aaatccttag aagatttaga aacttgggtg agcttagatg atttcaaagt tgaaggttat
     1501 gaataccacc ctgccattca atatccattt tcagtctaac accacctaca aaaagagcta
     1561 aactttcgac cagcttagct ctttcaattt gattataaac ctttcgggat acgaattttt
     1621 tgccctggga agattttatt ttcgtcttta ataacttctt tatttgcttc tacaatcgct
     1681 ttatattttg caccgttacc ataagctttt gtggcgattt cccacaacgt atcccctttt
     1741 tggataacat aaagctcatc atcacttgca agttgcacgt catcaggcaa ggtcacttca
     1801 tcaatattta cctcagtgat accagccaca ttacccgcca tcaataccgc tttctcaaca
     1861 gctgctgcgg ttgaagcaat gcctgaaatt ttcgctaccc cgttttcaac cgttacgttt
     1921 acattttcaa cgcccggatt gtcttccgcc aaatgctctg taaccgcttt tgaagcatct
     1981 tcttctttat taaataattt acgaccaatg tcgccaacaa aatcaaataa gcccatagta
     2041 agttccttat aaaatagcta aatgaagtgg gtattctaca caatttccaa ctattgaaat
     2101 agtgcattgt tctcttagaa cgtctaaaag ctaattagtt cctcaaggca acgcaacaca
     2161 agtggtcatt ttttctcaat tttttgcaaa aacaaacgct tagattttat attttactca
     2221 ttttcagcta gaatattaag tttaaatatc tgattgaatt tctgggaaca ttctgtgaaa
     2281 caagtacaat tttatctatt aagccaagcc gatgcagccg agctttccgc tgctgaaatg
     2341 caagcctgcg aacttgcggc tcaagcgtgg cgattaggta aacgggtact gattgcatgc
     2401 gaaaccgagc aacaagcgtt aaatattgac gaagcacttt gggcaagaga tccggattcg
     2461 ttcgtgccgc acaatttatc gggagaaatc accacttacc caacgcctat cgaaatttcg
     2521 tggaaaggta aacgcaatgc tcaacgtcgg gatttgttga tttcactcca aacccaactc
     2581 cccgaattta tcggcagttt tacccagatt attgatttcg tgccggtgga agaaaccgcc
     2641 aaagcacagg ctcgtgaccg ctataaacaa taccgccaac ttggttggca actggaaacg
     2701 atacaatgct aaaaaacctc tcttggcgcg caaaacgctt tgatgaactc tccacccaag
     2761 agttgtttga gatttaccac gcacgtacag cggtgtttgt ggttgagcaa aactgccctt
     2821 accaagaagt cgataataaa gacctgcaag cggtgcattt ctttacaaaa aatgcaaaaa
     2881 atctgaccgc ttactgccgt ttaattccag ccaatgatgg tgtgcatata ggtagagtgt
     2941 tggtggtgaa agaaaatcgt ggctcaggct tagcaaggga attggtacaa aaagcgatgg
     3001 attattgtgg cgaacatttt cctgctcaac ccattcacgc ccaagcccaa agttacctgc
     3061 aagggtttta tgaaagtttt gggtttaaag cggtttcaga agtgtatttg gaagatggga
     3121 ttgcgcattt ggatatggtg ttagaatgaa taaattagct aaaatcgaac aattaaaaac
     3181 agcactttca caacgccgtc cattatctga aagcgaagtt caacgactgc gggaagagtt
     3241 tattattgaa agcagctata attccaatgc aattgaaggc aataccatta ctttgcgtga
     3301 aacggtgctc attttaaaag agggaatgac cattgccgaa aaaccgattc gggagcattt
     3361 agatattatc ggttttaagg atgcattcaa ctatatttat gaattagtcg ccaataaaga
     3421 accattaagc gaacgagcga ttaaagatat tcattctctg gtattaatgg gcaatgcgga
     3481 aagccgaggg gtttatcgca aaattccagt acgaatttta ggggcagaaa atgccccccc
     3541 ccttatttaa ttgccgaaga aatgcaatta ttgattgaaa aatatcaaca aaaactgacc
     3601 gcacttcatc ccatagaggc aatcagttgg ctgcatttag cctttgaaag cattcaccct
     3661 tttattgatg gaaacgggct cacagggcga ttactgatta attttgaatt attaaaacag
     3721 ggctatttac cgattgatat taaatttacc aatcgagccc aatattacca atgttttgat
     3781 gatttccata aaaatcaaca agatattagt agtttggttg aattgattag tcagtatgaa
     3841 ttagctgagt tggaaaggta tttggcgatt ctgaaacaga ggacataaaa tgacaagtcg
     3901 tgaagaatta ctgaaaaaac aacgtgaact ggatattctc tttacagcat ggtttgaaga
     3961 aaagaaaaag cacgaagtgc tgacgtatcg ccgagaaaat ggggatttaa ttcagcatta
     4021 tccggacggt acggaaaaag tgattgaata tgcacaataa cctagcaatt ttttactgtg
     4081 gcacaaacgg agccggcaaa tctactttac gttctttcaa tcaagataaa gtcgagattg
     4141 tgattgattc cgataatatt gcgatgcaga ttaacccact caatccaaga ttggccgata
     4201 ttgaggcggg cagaaaagca atcgaactat ttcagtttgc agtaaaaaat caggttgcat
     4261 tttcaatgga atcaaccctc tcgggtaaat ctattctaaa acgaatggaa aatgccaaag
     4321 caggatattt caaaactcga ttaaattata ttggtgtcga tagctataaa attaacatcg
     4381 cacgggtaaa agcaagagtg aaagccggcg gacattttat tgatgaagaa accattagaa
     4441 aacgctatca cattagccgt gaaaatttaa ttgaagcgat ttttatcaat gatgaaacac
     4501 tgatttatga taattcagaa accaagccga atttgatttt gcagattgct gataagaaag
     4561 tgataaaaat ttcagacaaa ataccgaatt ggtgtaatca gctttgtgat gaattagtgg
     4621 aattagggtt taaaaccacc tagcacgagc cgtgctaggc tcgacaatcc cagctccttt
     4681 ggagctgtaa cttagagcca caaagtggct cagctatgcg taaccccaca cggcttgtgt
     4741 gtgggtgaca agctgtcgga ttaaagaaaa actttgcaaa aaacttctcg aaacagaccg
     4801 cttatgccta tctctgatag gttcttaaat aaataagctc tcgtcgaaga cgatcaccat
     4861 cggggatatt ggaacaaaaa cacaaagatg aaacagaata ggaaaaagtc taaaaaagtt
     4921 attggtactc ataaaaaaga gaatggctta aaacagttca taaaaaataa caaaattcct
     4981 attattctta tatctgccat atggagtatc ttcacaactg atattttaga acgcatcgca
     5041 aacatgccta ttattt
//
LOCUS       DANLTI010000153         5045 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.154, whole genome shotgun sequence.
ACCESSION   DANLTI010000153 DANLTI010000000
VERSION     DANLTI010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.154"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            36..2840
                     /locus_tag="PXB09_002422"
     CDS             36..2840
                     /locus_tag="PXB09_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL5234481.1"
                     /translation="MYKIKHSFNKTLIAISISSFLSIAYATESIENPQPIIQLSESLS
                     SKYSGKGVKLGVMDEGFMVKHPRHSSHLHPLIHQLTTPEGEVRIYDASYPQFEVNPVE
                     KEDGIDLIPSLETHGAGVAGIIAAQADKTLGDGYSGGIAKGAELYVATKSYKRTLEKV
                     IQDAKKELENAKDEEDEKTPSLDQMAKNDLLASKEKEMAIERAEWASGLNKLLDNNVF
                     AINNSWNPFSISDDINVVDKFYQSIKQNKHNPLLQAIMRAKNSNTLLVFAAGNESKKQ
                     PGVMALLPRYFPELEKNLISAVAVDKEQKIASYSNHCGASKNWCVAAPGDLHVLIGVA
                     DEHKKPQYGLTKEQGTSFSAPAITASLAVLKERFDYLTATQIRDTLLTTATDLGEKGV
                     DNVYGWGLINLKKAVNGPTQFLNDETITVTRDDHWSNPLASQFKITKKGDKSLHLDGE
                     NHLDTVAVEEGRLALNGKTKVKTISNHANLAVNGTEVEQNYSSSGQSQLEVLGKSGLI
                     ANAQANIHLAGSLKIDDKLTEKTEAGDVSATVVQLKDKATYQGGFTQLVENENLAKRG
                     LIQDLYFKESEIIAKVNKPLTDEKADTNGQAGLALLNALRTTPIAYRRSWYNGWLQSA
                     LEQRKLDNLHYAVSNNIYADSLELLRSQNAKGLTQAQQHLFTAYHTPLQTTVWAEHLN
                     QKQSASSKHTDVKHHQSQLGVNHKLADKTVLSATLSQQKNRLEKPFAQATLKQTALNI
                     GLRYHLDNAWFSEATLQFARQKYQQSRRFASHQLGTAETRGSTLGGEMRIGYQFMPNQ
                     WIIEPSLGVQWIQTKMNGLNESGELATQTAAMRYRDVNIVPSVKLQRTFQLEQGSISP
                     YIGLNYLHRLNGKITKITSNIAGKTLHSEATTKRNRQLNGEVGVKLHYKNWFTAMNLD
                     YSRVKSANLFGWKVNVGFSF"
     gene            complement(2981..3418)
                     /locus_tag="PXB09_002423"
     CDS             complement(2981..3418)
                     /locus_tag="PXB09_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDL5234482.1"
                     /translation="MDWFFNWIGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVA
                     LFTLGQALQIALFAIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEI
                     LPNGIARGKFGDTTWRVIGNNLQVADKIEVQKVEGITLFVRKQ"
     gene            complement(3454..4374)
                     /locus_tag="PXB09_002424"
     CDS             complement(3454..4374)
                     /locus_tag="PXB09_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDL5234483.1"
                     /translation="MNFDLPIVSIAFVVLVLVALSSTIKIVPQGYHWTVERFGRYTKT
                     LSPGLNIVVPFIDRIGRKMNMMEQVLDIPSQEVISRDNASVAIDAVCFVQTVDARRAA
                     YEVNHLEQAIVNLTMTNMRTVLGSMDLDDMLSQRDLINGRLLSIVDEATNIWGVKVTR
                     IEIRDVRPPKELVAAMNAQMKAERNKRADILEAEGIRQAEILRAEGEKQSRILKAEGE
                     RQEAFLQAEARERAAEAEAKATQMVSEAIAKGDTTAINYFIAQKYTEALKEIGSSDNS
                     KVVLMPLEAGNLIGSVAGIAEILKSNKTSS"
     gene            complement(4390..>5045)
                     /gene="ung"
                     /locus_tag="PXB09_002425"
     CDS             complement(4390..>5045)
                     /gene="ung"
                     /locus_tag="PXB09_002425"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDL5234484.1"
                     /translation="QKAYFQQILQYVHNERLAGKVIYPPQNEVFSAFALTEFSDVKVV
                     ILGQDPYHGPNQAHGLAFSVKPPVAPPPSLVNMYKELSEDIEGFQIPPHGYLIDWAKQ
                     GVFMLNTSLTVEQGRAGSHSQIGWEIFTDKVIAQLNQHRDNLVFLLWGSHAQRKGQFI
                     DRNRHCVLASPHPSPLSAYRGFFGCKHFSKANNYLISQGISPINWQLSVDVSYSSTH"
BASE COUNT         1682 a         1015 c          940 g         1408 t
ORIGIN      
        1 tacgtaaaat aagcttattt tttggaggta aaattatgta taaaataaag cattcattta
       61 acaaaacact tattgcaatt agcatttcta gttttttatc tattgcatac gctacagaat
      121 caatagagaa tccacaacct atcattcaat tatctgagag cctcagctca aaatatagtg
      181 gcaagggtgt taaactaggc gtaatggatg agggcttcat ggttaaacac cctcgccata
      241 gttcacatct tcatcctctt attcatcaat taacaacacc cgaaggcgaa gtaagaatct
      301 acgatgcaag ttaccctcaa ttcgaggtaa accccgtaga aaaagaagat ggaattgatc
      361 ttattccttc tcttgaaaca cacggtgcag gtgtagctgg tattattgcc gctcaagcag
      421 ataaaactct tggtgatggc tatagtggtg gtattgcaaa gggagctgag ctttatgttg
      481 caacgaagtc atataaacga actttagaaa aagttattca agatgctaag aaagaattag
      541 aaaatgcaaa agacgaagag gatgaaaaaa cgccaagtct ggatcaaatg gcaaagaatg
      601 acttattagc aagcaaagaa aaagaaatgg caattgaacg tgctgaatgg gcatccgggc
      661 tgaataaatt actagataat aatgtttttg caatcaataa tagttggaat cctttttcta
      721 ttagcgatga catcaatgtt gtagataaat tttatcaatc tatcaagcaa aataagcaca
      781 atccgctact tcaagctatt atgagagcca aaaatagcaa caccttatta gtctttgctg
      841 ctggtaatga gagcaagaaa cagccaggcg taatggctct tctaccacgt tactttcccg
      901 agcttgagaa aaatttaatt tctgccgttg cggtagataa agaacaaaaa attgcttcat
      961 actctaacca ctgcggagca agtaaaaact ggtgtgtagc agcaccgggc gatttacatg
     1021 ttttaattgg cgttgctgat gaacataaaa aaccacaata tggcttaaca aaagagcaag
     1081 gtacgtcatt ttcagcacct gctataactg cttcattagc agtattaaaa gaacgctttg
     1141 attatctgac tgcgactcaa attcgcgata ctttattgac taccgccact gatttaggtg
     1201 aaaaaggggt cgataatgtt tatggctggg gtctcattaa cctgaaaaaa gctgttaatg
     1261 gcccaactca attcctaaat gatgaaacga ttaccgtaac tcgtgatgac cattggtcga
     1321 atccactcgc cagccaattt aaaattacaa aaaaagggga caaatcactg catttagacg
     1381 gcgaaaatca tttagatacg gtagcagttg aagaaggtag attggcctta aacggtaaaa
     1441 ctaaggtgaa aacaatcagt aaccatgcaa atttagctgt caatggaacc gaagttgagc
     1501 aaaattattc ttcgtctgga caaagccaat tagaagtgtt gggcaaatct gggctaattg
     1561 ccaatgctca agccaatata catttagccg gctcgttaaa aattgatgat aaattaacag
     1621 aaaaaaccga agcaggtgat gtttcagcga ccgtagtaca gttgaaagat aaagcaactt
     1681 atcaaggcgg atttacacaa ttagtcgaaa acgagaattt agccaaacga gggttaatcc
     1741 aagatctcta tttcaaagag agcgaaatta tcgcaaaagt gaataagcca ctaactgatg
     1801 agaaagccga tacaaacggg caagccggtt tagcattatt aaatgcgtta agaactacac
     1861 ctattgccta tcgccgtagt tggtataacg gttggctgca atctgcactc gaacaacgta
     1921 aattagataa tctgcactat gctgtatcta acaatattta tgcagatagc cttgaattgc
     1981 tacgtagcca aaatgccaaa ggcttaaccc aagcacagca acatttgttt acggcatacc
     2041 atacaccact gcaaacgact gtttgggctg aacatttgaa tcaaaaacaa tcagcctcat
     2101 cgaagcatac cgatgttaaa caccaccaat cacaattggg agtaaaccac aaactggcag
     2161 ataaaacggt acttagtgca acactttcac agcaaaaaaa ccgcttagaa aaaccatttg
     2221 cacaagctac cttaaaacaa acagcattaa atattggctt acgttatcat ttagataacg
     2281 cttggtttag tgaagctaca ttgcaatttg ctcgccagaa atatcaacaa agccgtcgat
     2341 ttgctagcca tcaactaggt actgcagaaa ccagaggttc aacgctcggt ggtgaaatgc
     2401 ggatcggtta tcaatttatg ccaaaccaat ggataattga accaagcctt ggcgtacaat
     2461 ggattcaaac caaaatgaat ggtttaaatg aaagtggcga acttgcgact caaacggctg
     2521 caatgcgtta tcgtgatgtg aatattgttc caagcgtgaa attacagcga actttccaac
     2581 ttgagcaagg ctctatttcc ccttatatcg ggctaaatta cttgcataga ttaaatggaa
     2641 aaataaccaa aattaccagt aacattgcag gaaaaacact gcatagtgaa gcaacgacga
     2701 aacgtaatcg ccaattaaac ggcgaagtcg gggtgaaact gcattataaa aattggttta
     2761 ctgcgatgaa tttagattac agtcgagtga aatctgcaaa cctatttggt tggaaagtaa
     2821 atgttggctt tagtttctaa cttattatgg tgggacacaa gcggttaatt tagggtgaaa
     2881 atttgcaaat ttcactctat tttcaaccgc ttgagagaaa aaaccttgaa caactgttca
     2941 aggtttttgt ttagtgttct atgactaaat aagaaaaaac ttattgctta cggacaaata
     3001 aggtaattcc ctccactttc tggacttcaa tcttatctgc tacttgtaaa ttattaccta
     3061 taacacgcca agtcgtatca ccaaattttc ctcgagcgat gccattaggt aagatttcaa
     3121 ccacaaagcc ttgagctcct agcatagcat gctctcgaga gttaagggaa ctgctctgat
     3181 cctctttctt gtcttttcca tgctgatatt tccaccaaat aagactaaaa atagtcgcaa
     3241 ttatcgcaaa taacgcaatt tgtaacgctt gccctaatgt aaaaagtgca acgatgaaag
     3301 caagaataag cgaggcaaat ccccaccaca taataaagac acccggtaat actaattcta
     3361 atgcaagtag tacaaagcct aatatgctcc agccaatcca attaaaaaac cagtccatac
     3421 tccctccata tactcaatta atccggtttt aggctatgag cttgttttat tgctttttaa
     3481 aatttcagca ataccagcaa cagaaccaat caaatttcca gcttctaacg gcataagtac
     3541 aactttactg ttatctgaag aacctatttc tttcaaagct tcggtgtatt tttgtgcaat
     3601 aaaatagtta atcgctgtag tatcgccttt agcaattgct tcagaaacca tttgagtggc
     3661 tttagcttcc gcttctgcgg ctcgttcacg agcttctgcc tgtaagaatg cttcttgtct
     3721 ttcaccttct gcttttaaaa tacgagattg tttttcccct tcagcccgca gaatttcagc
     3781 ttgtcgaatc ccttctgctt caagaatatc agcacgttta ttacgctcag ctttcatttg
     3841 agcgttcatt gccgcaacca gctctttcgg tggacgaaca tcccgaatct caatacgggt
     3901 gacttttact ccccaaatat tagtcgcctc atcgacaatg gaaagtaatc taccgttaat
     3961 taaatcacgc tgagagagca tatcatctag atccatagag ccgagcacgg tacgcatatt
     4021 tgtcatggtt aaattaacaa ttgcttgctc taaatgattc acttcatagg cagctcggcg
     4081 agcatcaact gtttgaacaa aacatacagc atcaatcgca acacttgcat tatcacgtga
     4141 aataacctct tgcgatggaa tatctaaaac ttgctccatc atattcattt ttcgcccaat
     4201 acgatcaata aaaggtacga caatgttcaa ccccgggctt agcgttttag tataacgacc
     4261 aaaacgttct actgtccaat gatagccctg tggcacaatt ttaatagtcg aacttaatgc
     4321 aactaaaaca agcacaacaa atgcaatact aacaatcggt aaatcaaaat tcatcgtttg
     4381 ctccttaaac taatgtgttg aagaataact aacgtctact gataattgcc aattaattgg
     4441 ggatattcct tgagaaatca agtagttatt ggctttagaa aaatgtttac aaccaaaaaa
     4501 tccacgatat gcggaaagtg gtgatgggtg cggagaagct aacacacaat ggcgattacg
     4561 atcgataaat tgcccctttc tctgagcgtg gcttccccaa agtagaaaga ctaaattatc
     4621 acggtgttga tttaattgtg cgatcacttt atcggtaaaa atttcccaac caatttgtga
     4681 atgcgaaccg gctctacctt gctcaaccgt taagctggtg tttaacataa ataccccttg
     4741 ttttgcccag tcaattaaat agccatgcgg tggaatttga aatccttcaa tatcttcaga
     4801 taattcttta tacatattga ccagagaagg tggcggggca accggcggtt taactgaaaa
     4861 ggctaatccg tgggcttgat ttgggccgtg ataaggatct tgccctaaaa ttactacttt
     4921 cacgtcacta aattcggtta aggcaaaagc actaaacacc tcgttttgcg gaggatagat
     4981 gactttgccg gctaatcgtt cgttatgtac atattgtaaa atttgttgaa aatacgcttt
     5041 ttgtt
//
LOCUS       DANLTI010000154         4934 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.155, whole genome shotgun sequence.
ACCESSION   DANLTI010000154 DANLTI010000000
VERSION     DANLTI010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4934
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.155"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(100..1416)
                     /gene="argA"
                     /locus_tag="PXB09_002426"
     CDS             complement(100..1416)
                     /gene="argA"
                     /locus_tag="PXB09_002426"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDL5234485.1"
                     /translation="MQNTELALAQWFRQSTPYVNMHRGKTFVIMLDGDVIESPNFVNI
                     INDISLLHSLNIKLVIVFGARPQINQLLKQNHIEPEYYHNIRVTNPQSLEYVKQAVGK
                     VHYDFFARLSLRLPHSEVINVVSGNMILAQPIGVVDGVDYTLSGKIRRINIESIKQQL
                     AQNSIVLLGPIAPSVTGEMFNLPFEDIATQVAIKLRADKLIGFCEEQGILDENGKPIP
                     DYLPQDGETLLQQLIERGEYHTPKARFLQAAITVCREGVKRSHLLSYKEDGSLLQELF
                     SRDGIGTQFSMESSEQVRIANSSDIPGLLDLIRPLEQQGILVKRSREQLEMEITNYTI
                     IERDGVVIACAALNPYPEEKMAEMACVAVHPDYRDSSRGDILLENIQKRAVQLGMEKL
                     FVLTTRTTQWFQERGFRLAGAQDLPRYKRENYNYQRRSKVLILPLW"
     gene            complement(1545..1730)
                     /locus_tag="PXB09_002427"
     CDS             complement(1545..1730)
                     /locus_tag="PXB09_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1508 domain-containing protein"
                     /protein_id="HDL5234486.1"
                     /translation="MYFEIYKDAKEEFRWRLKAGNHEVIATNQAYTTKQGCQKGIEAV
                     KKVTPETEVKDLTKAEA"
     gene            complement(1846..3168)
                     /gene="pepP"
                     /locus_tag="PXB09_002428"
     CDS             complement(1846..3168)
                     /gene="pepP"
                     /locus_tag="PXB09_002428"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDL5234487.1"
                     /translation="MDLAYLAKMPQEEFTARRERVLEQMQDNSALLVFTESEKRRNSD
                     SEYLFRPDSYFWYLTGLAEPKSAVLLVKSEGKTESIIFVRKKDPLMETWNGRRLGIEE
                     APKTLQLNAAFDIDDIETVLAKKLENLTACYCALGIQEWGDNILFATFEKMKVNRQKV
                     PTTLIDWQPMLSEMRLIKSEFEIALIQQACHISSMAHIRAMKQARPNRYEWEIEGEIQ
                     HEFSRFGARFPAYNSIVAGGENACILHYNENDQVLKGGDLLLIDAGAEFAYYAGDITR
                     TFPINGKFSEPQKELYELTLTMQKEAINLLVPNSSIKAANDKAVQILTQGLVRLGILN
                     GDVESLIEQKAYRQFYMHGLGHWLGLDVHDVGDYGTERDRPLQIGMVLTVEPGIYIPK
                     DADVPEQYKGIGIRIEDNLLITEYGNKNLSSGCPKEIADVEQLMQSLN"
     gene            3384..3707
                     /locus_tag="PXB09_002429"
     CDS             3384..3707
                     /locus_tag="PXB09_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5234488.1"
                     /translation="MKLSSELQNQINQLNQLRKQALKQEQDEQKLFEKNKIEDLPHFG
                     TQLNAQRKLLGIELTTLEMQTGISSSTLKRLFKDPSQVKFQTICIVAETLGFNLCAIN
                     THKQE"
     gene            complement(3784..4802)
                     /gene="glpX"
                     /locus_tag="PXB09_002430"
                     /pseudo
     CDS             complement(3784..4802)
                     /gene="glpX"
                     /locus_tag="PXB09_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484632.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
BASE COUNT         1467 a         1118 c          855 g         1494 t
ORIGIN      
        1 cagtaataat tgccatagcc cctttgatgg gttgatgttt tttcatagtt ctccttttat
       61 agttctcttg gtaacaagcg gtcaaaaaca ttgaatattt taccaaagtg gtaaaattaa
      121 tactttagaa cgacgttgat aattgtaatt ttcccgttta tagcgaggta aatcttgggc
      181 acctgccagc ctaaatcctc gctcttggaa ccattgtgtg gttcttgtag tcagcacaaa
      241 gagtttctcc attcccagtt gcactgcccg tttttgaata ttttccagta gaatatcccc
      301 tcttgaggaa tcacgataat cagggtgaac cgccacacac gccatttccg ccattttttc
      361 ttccggatac gggttaagtg ccgcacaagc aatcaccaca ccatcacgct caataatggt
      421 gtagtttgtg atttccattt ctaattgttc tcgagagcgt ttgactaaaa tgccctgctg
      481 ttcaagtggg cggattaaat ccaataatcc cggaatatca ctggaattag caatacgtac
      541 ctgttccgag ctttccattg agaactgtgt gccaatacca tcacgagaga ataactcttg
      601 aagcaatgag ccatcttctt tatagcttaa taaatgcgag cgtttcactc cctctcggca
      661 taccgtgatc gccgcctgca aaaaccgagc tttcggggtg tgatattcgc cacgctcgat
      721 taactgctgt aacaaggttt cgccatcttg cggaagataa tctggaattg gcttgccgtt
      781 ttcatctaaa atcccctgct cttcacaaaa accgattaat ttatcggcac gaagtttaat
      841 tgcaacctgt gtggcaatat cttcaaacgg cagattaaac atttcaccgg taacagacgg
      901 ggcaatcgga ccaagtaata caatcgaatt ttgtgccagt tgctgcttaa tgctctcaat
      961 attaatacga cggattttac cgcttagtgt ataatctacc ccatccacca cgccaatcgg
     1021 ctgagctaaa atcatattac cactgactac attaatcact tcagaatggg gtaaacgcaa
     1081 agaaaggcgg gcaaagaaat cataatgaac tttccctacc gcttgtttca catattctag
     1141 cgattgtgga ttagtcacac ggatattgtg gtaatactcc ggctcaatat gattttgttt
     1201 taacaattgg ttaatttgcg gtcttgcccc aaatacaatc actaatttga tattcaggct
     1261 gtgcaggaga ctgatgtcat tgataatatt gacaaaattc gggctttcga taacatcgcc
     1321 atcaagcata atcacaaagg ttttgcctct gtgcatatta acataaggtg tagattgcct
     1381 aaaccattga gctaatgcga gttctgtgtt ttgcatatat ttcctcttta taatataaac
     1441 gcatattatc ttttttagaa aaatccgcaa gccttaaatt gaataattaa gcattatatt
     1501 tgcataaata acaaagccct gaaataatat cagggcttta tagattatgc ttcagctttg
     1561 gttaaatctt ttacttctgt ttcaggtgta acttttttaa ctgcttcaat gcctttttga
     1621 caaccttgct tagtcgtata agcttggttg gttgcaataa cttcgtggtt acccgctttt
     1681 aaacgccaac gaaattcttc ttttgcatct ttgtaaattt caaaatacat ataaacactc
     1741 cttcgtgttg tgattgccca aacactgtgt ttgtgtcggg ttagcttaag ctaaattccc
     1801 caaaatatca aagcaagcgg tcattttttt acaaaaattt gcgaattaat ttaacgattg
     1861 catcaactgc tcaacatccg caatttcttt agggcaaccg ctgcttaagt ttttgttgcc
     1921 gtattcggta atcagcaaat tatcttcaat ccgaatccca atacctttat attgctccgg
     1981 tacatccgca tctttaggaa tatagatacc gggttcaaca gttaacacca taccaatctg
     2041 caaaggacga tcccgctccg tgccgtaatc ccccacatcg tgaacatcta gccctagcca
     2101 atgccctaat ccgtgcatat aaaattggcg ataggctttt tgctcaatca ggctttccac
     2161 atcaccgttt aaaattccta agcgaaccaa gccctgcgtg agaatctgta cagccttatc
     2221 gtttgccgct ttaatcgagc tgtttggcac aagaagatta atcgcctctt tttgcatagt
     2281 taaggttaat tcgtacagct ctttttgcgg ttcggagaat ttcccattaa tagggaaggt
     2341 tcgggtaata tcgccggcgt aatacgcaaa ttccgcccct gcatcaatca gtaataaatc
     2401 gccgccttta agcacctgat cattttcatt gtagtgaaga atacaggcat tctcaccgcc
     2461 ggcaacgatt gaattatatg ccggaaacct tgctccaaaa cggctaaatt cgtgttgaat
     2521 ttccccctca atttcccact cataacgatt cgggcgagct tgtttcatcg ctcgaatatg
     2581 tgccattgaa gaaatatgac acgcctgctg aattaaggca atttcaaatt ctgatttaat
     2641 caaccgcatt tccgataaca ttggctgcca atcaatcaag gttgtcggca ctttttgccg
     2701 attgactttc attttttcaa atgttgcaaa caaaatatta tcgccccact cttgtatccc
     2761 taacgcacaa taacaagcgg tcagattttc taattttttt gcaagaacgg tttcaatgtc
     2821 atcaatatca aaagctgcgt taagctgtaa cgtttttgga gcttcctcaa tccctaaacg
     2881 tctgccattc caggtttcca ttaaagggtc ttttttacgc acaaaaataa tactttccgt
     2941 tttaccttcg ctttttacca gcaatacggc tgatttaggt tctgccaaac cggttaaata
     3001 ccaaaagtaa ctatcaggtc taaacaagta ttcagagtca ctattacggc gtttttccga
     3061 ttcggtaaaa accaataacg cagaattatc ctgcatttgc tcaagcacac gctcacggcg
     3121 tgcggtaaat tcttcttgtg gcattttagc caaataagcg agatccatta tttctccttt
     3181 ttattatatc tatatcgaaa cctgccttat tttagcacaa acgcagcata aattcagcct
     3241 aaccaaaaca gatgaaagat tatatttgag atcttgattg caaaaacaaa acagattaag
     3301 attaaatata acctttacat atctaaacag gttatattta acctatgaac acataaataa
     3361 tctactttta gctcaaaaat aaaatgaaac tatcaagcga actacaaaat cagataaacc
     3421 aactaaatca gttacgaaaa caggcactca aacaagagca agacgagcag aaattgtttg
     3481 aaaaaaataa aattgaagat ttgccacatt ttggcacgca gcttaatgct cagaggaaac
     3541 tattaggcat agaattaacc acccttgaaa tgcaaaccgg catttcaagc tctaccctaa
     3601 aacgcttatt taaagaccca agccaagtga aatttcagac aatttgtatt gtggcagaaa
     3661 cactcggctt taatttatgt gcaattaata ctcacaaaca agagtaagcg tgacaatgta
     3721 gtgattttga ttactttggg aagacaaaaa atcgggctaa aagcccgatt tatcagagaa
     3781 aagctataaa tccaataaag aaaggagttc gttatcttta cgatcgacat aatggtcgga
     3841 ttgaatttta cgaatggttc tagatttgcc acgaataagt aaggtttcag tgctggcaat
     3901 attgcctcta cgtttaatcc cttttaacaa ttcacctgaa gtaatgccgg ttgcaacaaa
     3961 gacgatattg tcatcacgca ccaaatcttc taatttcaac accgtattca ccggtacatt
     4021 catttcatta cagcgtaaaa gctctttttc ggtagcagtt aaattttccg ggctattccc
     4081 cttcacttgg ttgcgaggaa ttaaacgtgc ttgcatatcg ccacccaatg cacgaaccgc
     4141 agcccccgcc actacccctt caggtgctcc gccgatacca taaagcagat ccaattcgct
     4201 ctctggcaaa cagcattgca ccgcagccgc aacatcgcca tcaggaatcg caatcactct
     4261 tacccctaat ttttgcacat cggcaattat tttttcgtgg cgaggcttag caagatagca
     4321 atggttaatt gggaaagtaa tttgcccttt ttcgaggcga cacggcgaag attttgttca
     4381 agcggaagat ttaaatcaat cattcctttg cattcctgcc ccaccactaa tttttccata
     4441 tacatatcag gggcttttaa aaaggtttct ttgccgcctg ctgctaatac cgacaacgca
     4501 tttgcctgcc ccattgcagt catacgagta ccgtcaatcg ggtcaaccgc aatactgatt
     4561 tcctcatctt ctaggcggga tagaccgatt ttctcgccaa tataaagcat cggtgcttcg
     4621 tcaatttcgc cctcaccaat taccacttcg ccacggattt ccatttggtt cagcataaac
     4681 cgcattgctt tcaccgcagc ttcatcagcg gcatttttat ccccacggcc tagccaagag
     4741 taagctgcta gagccgctgc ttccgtaaca cgagaaaatt caaaagaaag agttcgtttc
     4801 atttttgttc cttagtttct tgaaagaaaa actttaaaag aagagagatt atattttatc
     4861 agtaacctgc aagctacgtt actaaaaaat cagcgtttga ataaaaattc acaaatagcc
     4921 aaactttttt ataa
//
LOCUS       DANLTI010000155         4914 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.156, whole genome shotgun sequence.
ACCESSION   DANLTI010000155 DANLTI010000000
VERSION     DANLTI010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4914
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.156"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..408
                     /locus_tag="PXB09_002431"
     CDS             <1..408
                     /locus_tag="PXB09_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDL5234489.1"
                     /translation="HSFSKFDFKPAPNANIILGQFSYKDFTDINLEDRHAWKDFLAFV
                     FLEKGVTFKEKTKRIFSYKQQKIILKESRINDDSNISNWSYEFWLKMFKLYNSNMVSK
                     DKKVLVNNSYKRMLEHESSLEKIHRNRKQNNRK"
     gene            complement(523..1494)
                     /locus_tag="PXB09_002432"
     CDS             complement(523..1494)
                     /locus_tag="PXB09_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002337518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element ISApl1 family transposase"
                     /protein_id="HDL5234490.1"
                     /translation="MSTSYRHLTINEREKIMILLAQGKKQAEIAKALGRSSSTISREL
                     KRHALESYSATNAQNSYLKHRQNSKAQRKLEQPEYFNLVQEKFLTENWSPEQISARLK
                     LEKSELSISYSTIYRGIYSGLFDIGERKASRKLRHKGKTRHTKNHHEKRGKIQISNHL
                     NDRPISAQNRSRFGHWKADTVLGKAGGACLLTLTERKSRFELVKKIPAKKAEAVQKAM
                     IELLDSHILRSITPDRGKEFAQHRLVTEALGVEFYFPEPHQPWTRGTNENTNGLLREY
                     FPKHQDINQWSEVDIQQVVNKLNLRPRKCLGWKTPYEVYFKKTLHLV"
     gene            complement(1675..2439)
                     /locus_tag="PXB09_002433"
     CDS             complement(1675..2439)
                     /locus_tag="PXB09_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5234491.1"
                     /translation="MLIEWRNQIVGDKIKAVTWNNYVRHLKSLYNFGLSQGVLNINQN
                     PFNQLFIRESKRRKKTYSTEQLHKIDHILNNNILLPDFLKPSWFILAIIMTLRCTGIR
                     RGQLVKLKIGDVNLSNRTIYISPEINKNHDYHIVPISDSLYLHIERLITELKIRKQTD
                     NCQLFNLNLFSRCSRRRGQPMSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKP
                     ENVYVVQKLLGHKDISVTLGYIEHDVEMLRETVNLL"
     gene            complement(2595..4574)
                     /locus_tag="PXB09_002434"
     CDS             complement(2595..4574)
                     /locus_tag="PXB09_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5234492.1"
                     /translation="MQSIFKKIFGKHTSQSAVKSDTVFSIEQDDDGWLYPQNATQLLN
                     TELRQKYLGLLWQQVSMNRQMFETFYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKARQSYILPPNVAPEEQSKQRDAWTAAAIYLALVHDIGKVVVDIEITLKD
                     GSRWFAWNGEPPEPYKFKYIKGRDYHLHLVIGSFFANQIIPKSAFDWLAQYPEVISSL
                     MYAMSGHNDKAGLLSEIVQKADQYSVTLALGGDVNKLVQRPVNSLSKQLVLALRYLLE
                     QKIKLNTPKGPADGWFTEEGLWLVSKTAADNIRTYLLGQGISVPKDNPKLFDEMQSLG
                     IVEESPSGGAIWSCRIQADSGWTPANVFTLLRIKPEVAWENINDRPNYFSGKVKIVEQ
                     IMEDSNMENHPPLVDESTKLVTLENVQPETIITSKEVEISQVEASSDNAPFSEIIIND
                     ENDLTSFVLDMFAPTESSEPSLADISIGKGQEIATMPSKQEVQDKPTTKKLNVTQSAV
                     ETPETLTLSELQSQNKENSITGDNFVNWLKSGIATNKFAINKPTAKLHIVEDHLFLVT
                     PVIFEMYLQESGLPYDKEMINSLQYDFQGLGIHLPKNTTINGKPDTINFWKCDVIGPR
                     KTSSLTGYLIKNTHLFFGDKTLLNNHCLTLQKEET"
BASE COUNT         1457 a          888 c          919 g         1650 t
ORIGIN      
        1 catagcttta gcaaatttga ttttaagcca gctccaaacg caaacattat tttgggccaa
       61 ttttcttata aagactttac agatataaac cttgaagaca ggcatgcttg gaaagatttt
      121 ttagcctttg tctttttaga aaagggagtt acatttaaag aaaaaacaaa acgaattttt
      181 agttataagc aacaaaaaat aattttaaaa gaaagccgaa ttaatgatga ttcaaatata
      241 agtaattgga gttatgaatt ttggctaaaa atgtttaaac tctataattc gaacatggta
      301 agcaaggata aaaaagtttt agttaacaat tcgtataaaa gaatgttaga acatgagtct
      361 agtttagaaa agattcatag aaatagaaag caaaataaca gaaaatagat aaacggcaga
      421 taaggaaaag ctaaatgtta aaattaaagc tagaaaacat aaacaaaact ttcgatggga
      481 aaaactttgt tgttaaaaat tttaatttgg aagcttgaat tgtcaaacca agtgcaacgt
      541 ttttttgaag taaacttcat aaggtgtttt ccaacccaaa catttacgcg gtcgtaaatt
      601 cagtttattg accacctgtt gaatatcaac ttcgctccac tgattgatgt cttggtgctt
      661 cggaaagtat tcacgaagta acccatttgt attttcattc gttccccgtg tccacggttg
      721 atgcggctcg gggaagtaaa attctacacc cagtgcttct gttaccaaac gatgttgggc
      781 aaattcttta ccacggtctg gcgtaattga ccgcaatata tgtgaatcca gcaattcaat
      841 catggctttt tggactgctt cggctttttt ggcaggaatt ttcttcacca actcaaaacg
      901 acttttgcgt tccgtcagcg tcagcaaaca agctccaccc gctttaccca gtacggtatc
      961 ggctttccaa tgtccaaagc gactgcgatt ttgcgccgaa atgggacggt cgttcaaatg
     1021 gttggatatc tgaattttgc cacgtttttc atgatgattt tttgtatgcc gtgttttgcc
     1081 tttgtggcgc agtttgcgac tggctttgcg ttcgcctata tcaaacaacc ctgaataaat
     1141 accacgataa atggttgaat aactaatgga taattcagat ttttccaatt ttaatcgtgc
     1201 gctgatttgt tcgggcgacc agttttctgt cagaaacttt tcttgcacca aattgaaata
     1261 ttcaggctgc tctaatttgc gctgtgcttt gctattttga cgatgcttca aatagctgtt
     1321 ttgtgcgttc gttgcactgt agctttctag agcgtgtcgt ttcagctcgc gagaaatggt
     1381 gctggagcta cgtcccagtg ctttggcaat ttctgcttgt tttttgccct gtgcgagtaa
     1441 aatcattatc ttttctcgct cgtttattgt aagatgtcgg taggaagtac tcatcatttg
     1501 gaagtggttt ttgtgtggaa acaaaattat attctagttg atgagtactt ctttttttgt
     1561 tgcacttgga ttgtaaattc agcgtataaa atcagttcat ttagaagata aaacagaaat
     1621 tatttattta tagaaaaaaa gtgggagaaa ttatattctc ccatttttct tttatcagag
     1681 taaattcact gtctctctca acatttccac atcgtgctca atataaccta gtgttacgct
     1741 gatatcctta tgccctagaa gtttctgaac cacataaaca ttttcgggct tcttcattaa
     1801 ttgagttgca accgtatgtc gaaatctatg tggtgatgaa gtaaaaccga ccaagtcaga
     1861 aatatgccga aatatatgcg taagctgatt ttggctcatt ggctgtcctc ttcttcgaga
     1921 gcatcgagaa aataaattga gattgaacaa ttggcaatta tctgtttgtt ttctgatttt
     1981 taactctgta ataagccttt ctatatgaag ataaagtgaa tctgaaatcg gtacgatatg
     2041 gtaatcatga tttttattga tttctggcga aatataaatc gtcctgttgg aaagatttac
     2101 atcaccaatt ttcagtttca ctaattgtcc tcgccgaatg cctgtacatc tcaatgtcat
     2161 aataatcgca agaataaacc aacttggttt tagaaaatca ggtaatagaa tgttattatt
     2221 gagtatgtgg tctattttat gtaattgttc ggttgaataa gttttctttc ttctttttga
     2281 ttcacgaata aataactgat taaatggatt ttgatttata ttgagtaccc cttgcgatag
     2341 accaaagtta tataacgatt ttaaatgtct gacataatta ttccatgtta cagctttgat
     2401 tttatcgcca acaatttgat tacgccattc aattagcata tcagtggtaa tctcatttgc
     2461 atttaacttt gggtaacgtc ttttgataat tcggattaca ttattatagc tccgcttagt
     2521 atcagggcga agatagtaac gatagaaaaa aaaatcggtc tagtagcgaa tcaaaagaga
     2581 tagatgtcgt cattttaagt ttcctctttc tgtaaagtta aacagtgatt atttaatagt
     2641 gtcttatccc caaagaagag atgtgtattt tttatcaaat atccagttaa agaggaagtc
     2701 tttctcggac caattacatc acatttccaa aaattgatgg tatctggctt accgtttatt
     2761 gtcgtattct taggtaaatg gattcctagc ccttggaaat catactgaag actatttatc
     2821 atttccttat cataaggcag accactctcc tgcaaataca tttcaaaaat aacgggggta
     2881 actaaaaaca ggtggtcttc aacaatatgg agcttggcag taggcttgtt aattgcaaat
     2941 ttgttggtcg caatacctga tttgagccaa tttacaaagt tatctcctgt aattgagttc
     3001 tccttattct gtgactgtag ctctgatagt gttaatgttt cgggcgtttc tactgcactt
     3061 tgtgttacgt tgagcttttt agtggtaggt ttatcctgta cttcttgttt ggatggcatc
     3121 gttgcaattt cctgtccctt accaattgaa atatcagcaa ggcttggctc agagctttcc
     3181 gtaggtgcaa acatatccag cacaaaagag gttaaatcat tttcatcatt tatgatgatt
     3241 tctgagaacg gtgcattatc tgagcttgcc tctacctgag atatttcaac ttccttagag
     3301 gtaataatag tctctggttg aacattctct aatgtaacaa gtttagtgct ttcatcaact
     3361 aatggaggat gattttccat attgctatct tccattatct gctcgactat tttaactttc
     3421 ccggaaaaat aatttgggcg atcattaata ttctcccaag ccacttcagg tttaattctc
     3481 aataatgtaa agacgtttgc cggtgtccaa cctgaatcag cttgaatacg gcaactccaa
     3541 atcgccccac cagaaggaga ttcttctacg ataccgagag attgcatttc atcaaataac
     3601 tttggattat ccttaggcac ggaaatcccc tgccctagta agtaagttcg tatattatca
     3661 gcggcagttt tgctaacaag ccacaatcct tcctcggtaa accaaccgtc tgcagggcct
     3721 ttcggagtat ttaacttgat tttctgttcc agtaaataac gtagtgccaa gacaagctgc
     3781 tttgacagag aattgacagg acgttgaacc agtttattta catcgccacc gagtgcgagg
     3841 gtaacactat actgatcagc tttttgcacg atttcagata aaagcccagc tttatcatta
     3901 tgtccggaca ttgcatacat cagagaagaa atgacttctg gatactgtgc cagccaatca
     3961 aatgcagatt tgggaataat ctgatttgca aagaagctgc ctatcacaag atgaagatgg
     4021 tagtctcgac ctttgatgta tttgaattta tacggttcag gaggttctcc attccaagca
     4081 aaccaacgtg agccatcttt gagtgtgatt tcaatatcta ctacaacttt gccaatatcg
     4141 tgaactaatg caagataaat tgctgcggca gtccaagcgt ctcgctgctt tgactgttct
     4201 tcgggagcca cattcggtgg caaaatataa ctctggcgag ctttagctga aaaagcaata
     4261 acttccaaac cgtgatcgag cattccacca atatgagaat gatgatgtga ttctgaagct
     4321 ggcaatagtt gaaccatttc agcgtaacgt tctattggtt gctgataaaa tgtctcgaac
     4381 atttgacggt tcattgatac ctgttgccaa agtagtccaa gatacttttg acgtaattcc
     4441 gtattcagta attgagtagc attttgggga tatagccaac catcgtcatc ttgctcaata
     4501 gagaaaacag tgtcagattt gaccgcactt tgagatgtgt gtttaccaaa aattttcttg
     4561 aaaattgatt gcattgaaag agaccgaaaa gtatcaattt tgtgttaaat gaaagccgtt
     4621 tagccctttg cccttttggg caagaccttt ccccttggaa aggttacctt tcacccttta
     4681 ggggttatcc tttgccctta aggactcctt tatccttttg ccatttaggg tgagcttgga
     4741 atatattttg tagtgtataa atatatttct gttaagttat ctaaaaactc tcaaatattt
     4801 ttaaatagtt tttgtatcaa tttacactaa tgctaggaga atatagactt taaatgctat
     4861 tgacacaatt cacagagtta aattaaggta gtaaatgctg tcggcaatat cggt
//
LOCUS       DANLTI010000156         4885 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.157, whole genome shotgun sequence.
ACCESSION   DANLTI010000156 DANLTI010000000
VERSION     DANLTI010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4885
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.157"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..328)
                     /locus_tag="PXB09_002435"
     CDS             complement(<1..328)
                     /locus_tag="PXB09_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5234493.1"
                     /translation="MQLTFNDFQNYYNGKGDLTMFSFYGKKTWENGIYVGIDGSIGRA
                     NNKLSHQSQTIKLARNVYSLGLTVGKTLEVASFNLQPSFGMRYHHLTSANAQLENTKF
                     ETDRVDL"
     gene            complement(377..1192)
                     /gene="cysE"
                     /locus_tag="PXB09_002436"
     CDS             complement(377..1192)
                     /gene="cysE"
                     /locus_tag="PXB09_002436"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDL5234494.1"
                     /translation="MQQSEINQIWQAIRDEAKELANCEPMLASFFHATILKHHNLGDA
                     LSYILANKLENPIMPAIALKEIIEEAYRAEPQIIASAACDINAVRTRDPAVDKWSTPL
                     LYLKGFHALQSYRVTHYLWNQGRKALAVYLQNEISVAFDVDIHPAAKVGCGIMFDHAT
                     GIVVGETSVIENDVSILQGVTLGGTGKENGDRHPKIREGVMIGAGAKILGNIEIGRYS
                     KIGANSVVLQPVPDHATAAGVPARIIGKSSEQKPAFDMNQYFEDEQGLFGDGI"
     gene            complement(1208..2218)
                     /gene="gpsA"
                     /locus_tag="PXB09_002437"
     CDS             complement(1208..2218)
                     /gene="gpsA"
                     /locus_tag="PXB09_002437"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDL5234495.1"
                     /translation="MSEIYSAPITVLGAGSYGTALAIALSRNGHKTYLWGHNPDKMAV
                     LASERMNQDFLPDIVFPEALEIVADLATAVQKSKDLLIVVPSHVFSEVLAQIKPFLSQ
                     DHRIMWATKGLERDTGRLLQTVAKEILGEIYPLAVLSGPTFAKELAAGLPTAISLAST
                     DPVFADQMQKRSHCSKAFRVYLNNDIIGVQLGGAIKNVIAIGAGISDGMGFGANARTA
                     LITRGLAEISRLGVSLGADPKTFTGMAGLGDLVLTCTDNQSRNRRFGLALGQGKSAEV
                     AIAEIGQVVEGFYNTKEAYLLAQTQGVEMPIVEQIYQMLFCGKQASDVVKTLLGRERK
                     GE"
     gene            complement(2325..2825)
                     /gene="secB"
                     /locus_tag="PXB09_002438"
     CDS             complement(2325..2825)
                     /gene="secB"
                     /locus_tag="PXB09_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDL5234496.1"
                     /translation="MSEENQVASTEEATQTPFELQIQRIYVKDVSFEAPNLPTIFQQE
                     WKPQLGFELDTETKEIGEDLYEVTLHITVQTTLEDSNDVAFICEVKQAGVFTIKGLEG
                     IQLAHCLASQCPNVLYPYARELISSLVNRGTFPALNLSPVNFDALFMDYLQRQEESAE
                     EPALAN"
     gene            complement(2846..3298)
                     /locus_tag="PXB09_002439"
     CDS             complement(2846..3298)
                     /locus_tag="PXB09_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5234497.1"
                     /translation="MEQLTFAQQLEQFFANHTLMVFAWVALLIAVIFSFYKSATQKYK
                     IVDNAQATQLINKEEAVVVDLRSDEEFRAGHIIDSIHVLPSDIKAAKINQIDKYKARP
                     VIVVDTNDFTSGGVAADLAKQGFSRVYVLKEGIGGWRAASLPTIKKHK"
     gene            complement(3414..4712)
                     /gene="tig"
                     /locus_tag="PXB09_002440"
     CDS             complement(3414..4712)
                     /gene="tig"
                     /locus_tag="PXB09_002440"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDL5234498.1"
                     /translation="MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGF
                     RKGKVPHSIIEQRFGIAARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPNNYQPGQD
                     FSFTAEFEVFPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKA
                     ESRVTIDFVGSVDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFP
                     EEYHAENLKGKAAKFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRE
                     LKNAVTSRVKTQVINGLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQLPAE
                     LFEAEAKRRVQVGLLLSSIIGSNELKVDEKRVEEMIADIASAYEQPAEVVAHYAKNRQ
                     LTENIRNVVLEEQAVDAVLAKAKVTEKTMSFDEVMSQQAQ"
BASE COUNT         1360 a         1108 c          880 g         1537 t
ORIGIN      
        1 aaagatctac cctatcagtc tcaaattttg tgttctctaa ttgggcattt gcagatgtta
       61 aatgatgata gcgcatacca aatgacggtt gtaggttaaa acttgcaact tccaacgttt
      121 tacctaccgt taatcctaaa gaatatacat ttctggctag ttttatcgtc tggctttgat
      181 ggcttaattt gttattcgca cgcccaatgc taccatcaat ccctacataa atgccatttt
      241 cccatgtttt cttaccataa aaagaaaaca tagttaaatc ccctttacca ttatagtagt
      301 tctgaaaatc attaaaggtt aattgcaact tgtacttagc aatgtctaaa tcataaatta
      361 aaggaataac tcttacctaa atcccatcac caaacaaacc ttgctcatct tcaaagtatt
      421 gattcatatc aaaagccggt ttttgttcag aggatttgcc gataatgcga gccggtacac
      481 ctgctgctgt ggcgtgatca ggcacaggtt gtagcaccac tgaatttgcc ccgattttag
      541 aatagcgtcc gatttcaata ttaccgagaa tttttgcacc ggctccaatc atcacgcctt
      601 cacggatttt cgggtggcgg tcgccatttt ctttccctgt accgcctagt gttacacctt
      661 gtaaaatcga gacatcattt tcgatcacag aggtttcacc caccacaata ccggtggcgt
      721 ggtcaaacat aattccgcaa ccgacctttg ccgcaggatg aatatccaca tcaaaggcaa
      781 cagaaatttc attttgtaaa taaaccgcta atgctttcct gccttgattc caaagataat
      841 gcgtcacccg atagctttgt aaagcgtgga agccttttaa gtacagcaga ggtgtactcc
      901 atttgtccac cgcaggatct ctagttctga ccgcattaat atcacaagct gcactagcaa
      961 taatttgtgg ctctgctcga taagcttcct caataatttc ttttaaggcg attgccggca
     1021 taatcgggtt ttctaactta ttcgccaaaa tataacttaa cgcatcgcct agattatggt
     1081 gttttaaaat ggtagcgtgg aaaaaacttg ctaacatagg ttcacaattc gccagctctt
     1141 tggcttcatc tcgaattgct tgccaaatct gattaatttc actctgctgc attttattct
     1201 cctttcttta ttcgcctttt cgttcacgcc ccaacaaggt tttcaccaca tccgaagcct
     1261 gtttgccaca aaataacatt tggtaaattt gttctacaat cggcatttca acgccctgtg
     1321 tttgagcgag caaataggct tctttggtat tataaaatcc ttctaccact tgaccgattt
     1381 ccgctatcgc gacttctgcc gattttcctt gccctaacgc caaaccaaat cggcggtttc
     1441 gggattggtt atcggtacac gtcagcacta aatctccaag ccccgccatt ccggtaaagg
     1501 ttttcggatc agccccgagc gaaacaccca aacggctaat ctccgccagc cctcgagtaa
     1561 tcaaggcggt acgagcattc gccccgaatc ccattccgtc tgaaataccg gcaccaattg
     1621 caatcacatt tttaatagcc ccaccgagtt gcacaccgat aatatcattg ttgaggtaaa
     1681 ctcggaacgc tttggaacag tgactccgtt tttgcatttg atcggcaaaa acaggatcag
     1741 ttgaggcaag cgaaatcgct gttggcaagc ctgccgccag ttctttggca aaagtcggac
     1801 cggaaagcac cgcaagcggg taaatttccc ccaaaatttc cttagctacc gtttgcaaca
     1861 aacgcccggt atctcgctcc agccctttgg ttgcccacat tatacggtga tcttgggaca
     1921 aaaaaggctt gatttgagcc aatacttcag agaatacatg acttggcacc acaatcagca
     1981 gatctttcga tttttgtacc gctgtagcaa gatctgcgac aatttctaag gcttccggga
     2041 atacaatatc aggcagaaaa tcttggttca ttcgctctga tgccaaaacg gccattttgt
     2101 cgggattatg cccccataaa taggttttgt gaccatttcg agaaagggca atggctaaag
     2161 ctgttccata agaacctgca cctaataccg tgattggggc agaatagatt tcactcatat
     2221 ttcctctgtt cggcttattt agaaaattgc aaaaaatagt agaaaaaata accgcttgta
     2281 aaaaaatagg tatgccttgc atacctattt tctatctaaa atgcttagtt cgctaaagcc
     2341 ggctcttctg cactttcttc ttggcgttgg agataatcca taaataacgc atcaaagttt
     2401 accggtgaga gatttaatgc cgggaatgta ccacgattca caaggcttga gattagctca
     2461 cgagcataag gataaagcac attcggacat tgtgaagcta agcagtgagc aagttgaatg
     2521 ccttctaaac ctttaatagt aaacacacct gcttgtttta cttcacaaat gaaagcgaca
     2581 tcattgctgt cttctaacgt agtttgcacc gtaatgtgta aggtaacttc gtataaatct
     2641 tcaccaattt ctttggtttc agtatctaac tcaaagccta attgtggttt ccactcttgt
     2701 tggaaaatag tcggtaaatt tggtgcttca aatgaaacat cttttacata aatgcgttga
     2761 atttgaagct caaaaggggt ttgtgtagct tcttctgttg atgcaacttg attttcttct
     2821 gacataaaat ttccttaata atagattatt tatgtttttt aatagttggt aggcttgctg
     2881 cacgccagcc gccaatccct tcttttaata cataaactct gctaaagcct tgtttagcaa
     2941 gatctgccgc aacaccacct gaagtgaagt cattagtgtc tactacaatt accgggcgag
     3001 ctttgtattt atcaatctga ttgattttag ctgctttaat gtctgacggt aacacgtgaa
     3061 tgctatcaat aatatgaccg gcacggaact cttcatcaga acgtaaatca accactactg
     3121 cctcttcttt attaatcagc tgtgtagcct gtgcgttatc gacaatttta tatttttgcg
     3181 ttgcactttt ataaaagcta aaaattaccg caatcaataa tgcaacccaa gcaaacacca
     3241 tcaaggtatg attggcaaaa aattgctcta attgttgagc aaaagttagt tgttccataa
     3301 ttcaatttcc ttaacatcaa aaaataagcg gtcgttttga tgcaaattta tcactaaatt
     3361 taaccgcttg taaaagtaat aaaaggtgag caaaagccca ccttataagg aaattattga
     3421 gcttgttgtg acattacttc gtcaaatgac attgtttttt cagtcacttt cgctttcgct
     3481 agcactgcat caaccgcttg ctcttctaat accacattgc ggatattttc agttaattga
     3541 cggtttttcg catagtgagc aaccacttca gccggttgtt cgtaagctga agcgatatct
     3601 gcgatcatct cttcaacacg tttttcatct acttttaatt cgttagaacc gatgattgaa
     3661 gataataata agcccacttg aacacggcgt ttagcttctg cttcaaataa ttcagccggt
     3721 aattgagctg ccatttcagg cttaccacca aaacgttgca ccgcttgttg gcgtaatacg
     3781 ttgatttctt cttcaaccgc agcagccggc acttcaacat cattttgagc aattaagccg
     3841 ttgattactt gagttttcac acgtgaagtg actgcatttt taagttcacg ttgcatattt
     3901 ttcttaattt ctgcgcgtaa ttcttccact gattttgcat taccgaattt tttcacaaac
     3961 tcttcggtta attccggtaa taccatctct tctacttttt tcaaggtaat tgcaaatttc
     4021 gctgctttgc cttttaagtt ttcagcgtgg tattcttctg ggaaagtcac atcaatgtcg
     4081 aattgctcac ccgctttacg acctacgatt ccgtcttcaa accccgggat catacgacct
     4141 tgccccataa ataacacgaa gtctgatgct ttaccgcctt cgaattcttc accatctact
     4201 gaaccaacga aatcaatagt tacacgagat tcggcttttg cagcctcttg gctttctgac
     4261 caagtcgctt gttgtttgcg taatacatct accattttgt ctaaatcagc gtctgcgatt
     4321 tcaacaaccg gtttttctac ttcgatattc tctaaacctt ttaattccac ttctgggaat
     4381 acttcaaatt ccgcagtaaa gctgaagtct tgacctggtt ggtagttgtt tggcgtgaaa
     4441 gtagggcgac ctgccaagtt gattttttca gcaatgacgg cttcaaagaa tgcacgttgc
     4501 atttcatcag ataacacatc ttgacgggct gcaataccaa aacgttgttc gataattgag
     4561 tgtggcactt tacctttacg gaagccatct acacgagcat ttttcgcata gccttttaat
     4621 tgttctttgt atgctgcttc gattttatca gctggtacgt taatagtaac acggcgtttt
     4681 aagccttcta atgtttcaat tgaaaatgac attcttaaac ctcggtttag ggatataaaa
     4741 aagatataca aatagacggt tattgtagcg ttctatcaag aaactgtcga gaagaaactc
     4801 attcgcaaat aaacagtttt gtaaaaaatc cctaaaatct gactgcttgt caatgggctt
     4861 gcctacaagc ggtctttttt caccg
//
LOCUS       DANLTI010000157         4783 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.158, whole genome shotgun sequence.
ACCESSION   DANLTI010000157 DANLTI010000000
VERSION     DANLTI010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.158"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..555)
                     /locus_tag="PXB09_002441"
     CDS             complement(<1..555)
                     /locus_tag="PXB09_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234499.1"
                     /translation="MEGLIMGLQLIPHFPELAISRRTYLHDMPMYCFVSKNWIFSAKD
                     RAKREALGNLLACGGEMMKSFIFKRSLFSEIWFEDILLEDEEKELIRILYNKPEPEYQ
                     VEEKIDWEAREARRKQADYDKWQSYDERNPFHYQIFPTDTIAYAQQQVEKFIEDVDNF
                     LEWFYDDEVKRYILERNEIYQKKFD"
     gene            complement(1088..1414)
                     /locus_tag="PXB09_002442"
     CDS             complement(1088..1414)
                     /locus_tag="PXB09_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234500.1"
                     /translation="MLHSKGKILPKITLNEIETKERFAIALRKEMHAQYWTGKMVANA
                     LDVSEKTVKDWVAGKRLPSSLDLLALMRISSCVRQLVWDISKSEECYQDAEMLKQICF
                     VLLSNL"
     gene            1462..3093
                     /locus_tag="PXB09_002443"
     CDS             1462..3093
                     /locus_tag="PXB09_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDL5234501.1"
                     /translation="MVTRTKNQPKNQAVSYIRMSTEHQEFSPDLQRCFIENYAKENGL
                     EIIREYIDEGKSGLTAEHRPQFLSMIQLVQSGQADFDHILVYDVSRWGRFMNIDESGH
                     YELICTYQGIKVHYCAEPFKGNDIASQIYKTMKRLSVGDYCRELGVKVFNGQKNLIQH
                     GFRQGGVAGFGLRRRLIDCQGNPKFDLQRGDRKSLQTDRVILVAGPKEEQEIVRQIYH
                     DFVYQHKTEQQIADSLNAQGIVTDRNTAWTKGVVHQILINEKYVGHNVWNKRSASKTR
                     EYKGKNPVEEWVRAENVFEAIVPQALFNAAQTIIHQRSARLSDDEMLEQLKLLLKEKG
                     KLSGLIIDEAENCPSSSAYSSRFGSLLNTYTLINYEPERDYHYVEINRLLRQQHKNFV
                     QQTLDTIIELGGVVLSDDVTDLVHINNEFTASIVLSRCRLTPSGSKRWLIRFDTSLNP
                     DITIAVRINESATEILDYYLLPTTEKVNEKLRLAESNPAELEIYRHDNLDRFFIMVER
                     ILVKEFIYAKRHHSNSSYRQNSGTQSQNAQSESLC"
     gene            3008..3901
                     /locus_tag="PXB09_002444"
     CDS             3008..3901
                     /locus_tag="PXB09_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5234502.1"
                     /translation="MQNDTIQILPIDKIRVLNPRTRNQKVFADLVENIATIGLKRPIT
                     VTPSVDSAEYYDLLCGQGRLEACQVLGELFIPCRVVNANSEESYLISLVENIARRQHS
                     YMELLSGIKILNDRGYKPVDIARKIGFSKSHVNSILHLINAGEERLINAVEQGILPIT
                     IAISISRSDDQEVQKQLAELYTNGTLKSTDIAKIRNLIHRRNLAGKKANTGISGSIRS
                     SIYNPKTVVNIYKEETERQKMMIKQADYDEKQLSIILSCLNKLFEDKYFQLVLKSEHL
                     DDMPKDLSQRMLKQREGNIYA"
     gene            3894..4757
                     /locus_tag="PXB09_002445"
     CDS             3894..4757
                     /locus_tag="PXB09_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5234503.1"
                     /translation="MPKHITYAFHNQLISLPIDEIIPLKKMDKNFEKSTKFQSILASI
                     REIGIVEPVVVYPEENNQYILLDGHSRVHALKKLGVDKVLCMISTDDEGFTYNKQINR
                     LTAVQENKMLMKTIERGVSDELIARTLNINLKALRQKMNMLNGITREVVDILANKQVS
                     KEIFRILRKMKPERQIEVAQMMIASNKFTLTYANMMLLSSRKEELVESHKSKTTNDDL
                     TDLSIMQKELERLKENYKISEEKLADLKMGLVVAKGYVKKLLNNAAVVDLLENDQSEI
                     YLTLKEVCDIQ"
BASE COUNT         1570 a          919 c          930 g         1364 t
ORIGIN      
        1 atcgaatttc ttttggtaaa tctcattcct ttctaatata tagcgtttta cctcatcatc
       61 gtaaaaccat tcaagaaagt tatcaacatc ttcaatgaac ttttctacct gttgctgtgc
      121 atatgctatc gtatcggtag ggaagatttg ataatgaaac ggattgcgtt catcataact
      181 ctgccatttg tcataatcgg cttgtttacg ccgcgcttct cttgcctccc agtcgatttt
      241 ttcttccact tgatattctg gctctggctt attatacaaa atacggatga gttccttttc
      301 ttcatcctca agcagaatat cttcaaacca gatttcagaa aataggctgc gcttgaaaat
      361 gaaagacttc atcatttccc ctccacacgc caataagttt cccaatgctt cccgtttcgc
      421 tctatctttt gccgaaaata tccagttttt cgatacaaaa cagtacattg gcatgtcatg
      481 caaataggtt cttcgtgaaa tggctaattc aggaaaatga ggaataagct gtaaccccat
      541 tattaagcct tccatactgc acacgatctt acttaattgt ccgtaatcgc gtaaaaaagc
      601 aatgtcagtt tttatcaacc acaacgatag gctgactaat atgaacataa agatgagata
      661 atagatcggt tttaaggcta aggcgcgccg acaaagccac attaagagtg gaatcgtaac
      721 gagatcaaag aaaaatgatg agtctatgat gatttcctta tgtgagttga tgaataatca
      781 ggcatgaagg aaaccttaaa aaggaaaagt cccttcatta ccacttttta aaacctttta
      841 aggcttaaaa atcaaaagtc gtaatgaagg gactattgtc cgtgggcaaa aaggtattag
      901 ttataggggg ctttgtcaag cgaaaattta ctgtgcattt tctcgccaaa actgatttaa
      961 gccttgataa aatctcgaaa gtaccttgtc aagaaaaatc tttttagtgg tttgattgct
     1021 agttttttga gcaaaactat gctgtaatgc agtaaaaata cagtttctat ctgtgtttgg
     1081 aatccagtta caaattggag agtaatacaa agcatatttg cttgagcatc tcagcatctt
     1141 ggtagcattc ttctgatttt gaaatatccc aaacaagctg ccgtacacat gatgaaattc
     1201 tcattaacgc caataaatct aggctacttg gcaatctttt ccctgcaacc caatctttaa
     1261 ctgttttctc actcacatct aatgcattgg cgaccatttt ccccgtccaa tattgagcat
     1321 gcatttcctt tcgtaacgca attgcaaacc gctctttcgt ttcaatctca ttgagtgtaa
     1381 ttttgggtaa gattttaccc tttgagtgca acatatttcc tcccgattcc tttatattgg
     1441 tgtagataag gagtcattag aatggttaca cgtacaaaga atcaacctaa aaatcaggcg
     1501 gtttcctaca ttcgaatgtc aacggaacac caagaatttt caccagacct tcaacgttgc
     1561 tttatcgaaa attatgctaa agaaaatggg ctagaaatca ttagagaata cattgatgaa
     1621 ggaaaaagtg ggctaaccgc agaacaccgc ccacaattcc tttcaatgat acaactcgta
     1681 caaagtggac aagccgactt cgatcatatt ttggtgtatg acgtgagtcg ttggggtcgg
     1741 tttatgaata ttgatgaatc ggggcattat gaactgattt gtacctacca aggcattaaa
     1801 gtccactatt gcgccgagcc attcaaaggg aatgatattg cctctcaaat atataaaacc
     1861 atgaaacgtt tgtcggtagg agactactgt cgtgaactcg gagtgaaagt atttaacggt
     1921 caaaaaaatc tgatccaaca tggatttaga caaggtgggg tagctggatt tggattgcgt
     1981 aggagattga ttgactgtca aggaaaccct aaatttgatc tccaacgtgg agatagaaag
     2041 agcctacaaa ccgacagagt gattttggtt gcaggcccaa aggaagagca ggaaattgtc
     2101 cgacaaattt accatgattt tgtttatcaa cataaaacgg aacaacaaat tgctgatagc
     2161 ttaaatgcac aaggcattgt tactgataga aatacagcat ggacgaaagg cgtagtacat
     2221 caaatcctta ttaacgaaaa gtatgtcggc cacaatgttt ggaataaacg tagtgcatca
     2281 aaaacacgcg aatataaagg taaaaacccc gtagaagagt gggtgcgagc tgagaatgta
     2341 tttgaagcta tcgtgccaca agccttattt aatgcagccc aaaccattat tcatcaacgc
     2401 tccgcccgat tatctgacga tgaaatgtta gagcaactca agctactttt gaaagagaaa
     2461 gggaagctgt ctggcttgat cattgatgaa gccgaaaatt gtccatcaag tagcgcgtac
     2521 agtagccgat ttggaagcct acttaacaca tatactttaa ttaactatga acccgaacgg
     2581 gattaccact atgtagagat caaccgatta ctccgtcagc agcataaaaa tttcgtacaa
     2641 caaacacttg ataccattat tgaattgggg ggagtggttt tgagcgatga tgtaaccgat
     2701 ttagtccaca tcaataatga atttaccgcc tcaatcgtat taagtcgttg tcgcctaacg
     2761 ccatcaggaa gcaaaagatg gttgatccga tttgatacca gtttaaatcc cgacataaca
     2821 attgcagtgc gcatcaatga gagtgccaca gaaattcttg attactacct gcttcccaca
     2881 actgaaaagg taaatgaaaa actacgattg gctgagagta atcctgccga acttgaaatc
     2941 taccgccatg ataatttaga tcgctttttt attatggttg aacgtatttt agtcaaggag
     3001 tttatctatg caaaacgaca ccattcaaat tcttcctatc gacaaaattc gggtactcaa
     3061 tcccagaacg cgcaatcaga aagtctttgc tgatctggtc gaaaacattg caacgattgg
     3121 tctcaagaga cctattaccg taacgccatc tgtcgatagt gctgaatatt atgatttgtt
     3181 atgcggtcaa ggtcggcttg aggcttgtca ggtgcttggt gagctattca taccttgtcg
     3241 cgttgtgaac gcaaatagtg aagaaagcta cttgatcagc cttgtggaaa atattgccag
     3301 acgtcagcat tcctatatgg agctgctttc aggcatcaaa atactcaatg atagaggtta
     3361 taagcccgtt gatattgctc gcaaaatcgg tttctcaaaa agccatgtca acagtatctt
     3421 acacctcatc aatgctgggg aagagcgcct tatcaatgcg gtagagcaag gaattttacc
     3481 cattaccatc gctatttcga tttctcgttc agacgatcag gaagttcaaa aacaactcgc
     3541 ggaactttac accaatggta cattgaaaag caccgatatt gccaaaatac gtaacctgat
     3601 ccaccgtaga aatcttgctg gtaagaaagc caatacaggt atttctggaa gtattagatc
     3661 atctatttat aatcccaaaa ctgtggtgaa tatctacaaa gaggaaacgg aaagacagaa
     3721 aatgatgatc aagcaagcgg actatgatga aaaacaactc tctattatct tgtcttgctt
     3781 aaataaactc tttgaggaca aatactttca actcgtcctt aaatcagaac atttagacga
     3841 tatgccaaaa gatttaagcc aacgaatgtt aaaacaacga gagggaaata tttatgccta
     3901 aacatattac ttatgccttt cataatcagt taatttcgct tccaattgat gagattattc
     3961 cattaaaaaa gatggataaa aattttgaga aaagcactaa gttccaaagc attctggctt
     4021 caattcgtga aatcgggatt gttgaacctg tggtcgtcta tccagaagaa aacaaccaat
     4081 atattttgtt agatggccat tctcgtgtac atgcactcaa aaagctaggt gtggataagg
     4141 tgctttgtat gatttctacc gatgatgaag gctttactta caacaagcaa attaaccgct
     4201 taaccgccgt tcaggaaaat aaaatgctga tgaaaaccat tgagcgcggg gtttcggatg
     4261 aactgatcgc aagaacactc aatatcaatc taaaagcact acggcagaaa atgaatatgc
     4321 ttaatgggat cacaagagag gttgttgata tattggccaa taagcaggtc agtaaagaga
     4381 tatttcggat tttgcgcaag atgaagcctg aacgccaaat tgaagtggca caaatgatga
     4441 tcgccagtaa taagtttaca ttgacatacg ccaatatgat gttgctcagt tcacgcaagg
     4501 aggaattagt cgaaagccac aagtctaaaa ccacgaatga tgatttaacc gatctttcca
     4561 ttatgcaaaa agagctagag cgacttaaag agaactataa aatttccgaa gagaaattgg
     4621 cggacttaaa aatgggattg gttgtggcga aagggtatgt caaaaaacta ttgaataatg
     4681 ctgccgtggt agatttgctt gaaaatgatc agagtgaaat ctatcttact cttaaagaag
     4741 tatgtgatat tcaataatat aatatctagc taataacctt aat
//
LOCUS       DANLTI010000158         4604 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.159, whole genome shotgun sequence.
ACCESSION   DANLTI010000158 DANLTI010000000
VERSION     DANLTI010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4604
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.159"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(53..928)
                     /locus_tag="PXB09_002446"
     CDS             complement(53..928)
                     /locus_tag="PXB09_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5234504.1"
                     /translation="MWIWFTLLAAVAQAGRNAFQKQLSVNVPVLGVTLARFFYAVPLA
                     SGYLYFLYQYDDNLNIPHFPPLFFVYAIGAGLAQILATSLMVQLFHLKNYAIGVGLAK
                     SEAVWAALLGVLFFGVTISGIGWLGVVLGGVAIFLMTGSGNLRQLSWKTLFLGIASGL
                     CFALTSLWVREASLQLNSHYLLSAAWVLFSVISFEAVILVIYLALLQKETLIKFFRFP
                     KLGMLTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFFILGISYFVFKERLKIQDFI
                     GLILVVIAAILVVLG"
     gene            1036..1872
                     /locus_tag="PXB09_002447"
     CDS             1036..1872
                     /locus_tag="PXB09_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDL5234505.1"
                     /translation="MLPHIYIGTGGYADTDLIGTLYPFGTAKEDFLFVYSQHYDTLEI
                     NSTFHAPIGQKAFEGMVQKAEGRLNFSVKLHQDFSHQRTATLDQAQLFLNALAPFTAE
                     GLLANLFVQFPTQFERMPLNRRYLAELCQWFADYPLAIEFRHPSWHIPAVFDTFAKSS
                     NLIWCNVDYPQNIGLPAFHFFANQRTAYLRLHGRNPNWWKGQSAAERHDYRYSDEELK
                     GLAELLFSRRTEFDRLYLYFENTTKSHAFYNIQTLKGFLAEKGFQIKPVPENLLGQQS
                     LF"
     gene            complement(1947..>4604)
                     /locus_tag="PXB09_002448"
     CDS             complement(1947..>4604)
                     /locus_tag="PXB09_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5234506.1"
                     /translation="ANGKLLITGGTNLNGTLSAEGTSEIILSGRPTPHAYDKVANKEV
                     LIEGDWINRSFNATIFAAKDNGKLEISRNVANINGNFNLTDNATAQIGFTQGTSQACI
                     RSDRTGVATCNINATLSETDLNSWERTKVAGNVSLADNSTFSLGSKADLTGSITAQES
                     TKVQLNDGSIANLTGLSTTGIFNGANGSTVNLSGVWTTLTNTVVDVLNVANGSQIHLN
                     TPTATKQNTLTANTLTGNGIFKFVADLTKTASDIVTIKDTASGQFSIEISTNGSAHSA
                     QKIKLFETTNEEDFSLNLANEVRSGEYRYHLLKEGNVYYLNPEKEEEPKITQKGPSET
                     ADPLPEYTGDIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIAS
                     ELTAQTNAVLGVTTVLDHVIHSEGTQKQNTLTANTLTGNGIFKFVADLTKTASDIVTI
                     KDTASGQFSIEISTNGSAHSAQKIKLFETTNEEDFSLNLANEVHSGEYRYHLLKEGNV
                     YYLNPEKEEEPKITQKGPSETADPLPEYTGDIEYSEKGPGETADPLPEYTGDIEHSEK
                     GPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIASELTAQTNAVLGVTTAL
                     DHVIHSEGTQNWKVWSKTDYQTTEHRSAGYGFNQDANVIHLGLEKALDNQVTLGMILS
                     QSKARNNFDHYYSGKGRLTMLSMYAKKTWQNGVFVAIDTGFGKASNRLTYQANTVKLD
                     RSVFVTGLSIGKAWESANVNIIPSFSARYHHLSSAGNQLVDAKIETNAVDLLALQAGL
                     SINKTLELNGLQIKPEIGSYFVDASHGKLRTRFNNLQIEQQMGRYFKQEAGISANYRN
                     INAGIQAGFLTGNTLNKQRYISFKVTYEW"
BASE COUNT         1272 a          990 c          931 g         1411 t
ORIGIN      
        1 cgtgggctta cgcccaccct acaaagctag ataaaaaacg taaaaatccg atctagccca
       61 gcaccaccaa gattgcggca atcactacta aaatcagccc tataaaatct tgaattttaa
      121 gccgttcttt aaacacaaaa taggaaatac cgagaataaa gaaaatttcc acttgtccaa
      181 gcgtttttac aaaggcaacg tggttcaggc tcattgcatt gaaccaaccg aatgagccga
      241 gaaatgaaaa caggctggtc aacataccta attttggaaa acgaaagaat ttaatcagtg
      301 tctctttttg gagaagagct aggtatataa ccaatatcac tgcctcaaag ctaatcacgc
      361 taaaaagtac ccacgccgct gaaagcaaat agtggctgtt gagttgcagg cttgcctctc
      421 gcacccaaag tgatgtgagg gcgaaacata aaccgctggc tatgccgaga aagagtgttt
      481 tccacgaaag ttggcgtaga ttaccgctgc cggtcattaa gaaaatcgcc actccaccta
      541 gtaccacgcc aagccagcca atgccactga tggttacacc aaaaaataac acgcccagta
      601 aagccgccca tactgcctcg cttttcgcca gcccgacacc tattgcataa ttttttaagt
      661 gaaaaagttg caccattagc gaagttgcca gaatttgagc caacccagcc ccgatagcat
      721 atacaaaaaa cagcggtgga aaatggggaa tgttgaggtt atcgtcatat tggtataaaa
      781 aatagagata accgcttgcc aacggcacag catagaaaaa gcgggcgagc gttaccccca
      841 atacaggcac attgacgctt aattgctttt gaaaggcatt gcgaccggct tgagccacgg
      901 ctgccagcag agtaaaccaa atccacataa tgatgatgaa ataagaaaag atagccaaat
      961 cttactcttt tattctcagt ttgcaagcgg ttaaaaaacc attaaaattt gcaaaaaatt
     1021 gaaagaataa acacaatgct ccctcatatt tatattggca ccggcggcta tgccgacaca
     1081 gatttaatcg gcacgcttta cccattcggc actgcaaaag aggattttct ctttgtctat
     1141 agccaacatt acgacacgct ggaaattaac agcacattcc acgcccccat cgggcagaaa
     1201 gcctttgaag gaatggtgca gaaagcggaa ggtcggctga atttttcggt gaaactgcat
     1261 caagatttca gccatcaacg cacggcgact ttagatcaag cacaattatt tcttaatgcg
     1321 ttagctccgt tcaccgctga agggttattg gcaaatttat ttgttcagtt cccaactcaa
     1381 tttgaacgta tgccacttaa ccgccgttac cttgccgagt tgtgccaatg gtttgcggat
     1441 tatccgttag cgattgaatt tcgccaccca agctggcata ttccggcggt gtttgatacc
     1501 tttgcgaaaa gctctaatct gatttggtgt aatgtggatt acccacaaaa tatcggctta
     1561 ccggcatttc acttttttgc caaccaacgt actgcttatt tacgcttaca tggtcgtaac
     1621 ccgaattggt ggaaagggca gagtgcggca gaacgccacg attaccgcta ttcagacgag
     1681 gaattaaaag gcttggcaga attgcttttt agccgcagaa cggaatttga caggctctat
     1741 ctctactttg aaaacaccac taaaagccac gccttttata atattcaaac cctaaaaggc
     1801 tttttggcgg aaaaaggatt tcaaatcaaa cctgtgccgg agaatttgct tgggcagcag
     1861 agtttgtttt gatgggtaat ttacattgtt gaggagtaaa taaagggcca tgccatttag
     1921 taatggatag cccttaatct caatatttac cattcatatg taactttgaa cgagatataa
     1981 cgctgtttat ttagcgtatt ccccgttaag aaacctgcct gaattcctgc gtttatattg
     2041 cgataattag cggatatacc tgcttcttgt ttaaaataac gccccatttg ctgctctatt
     2101 tgtaaattat tgaaacgtgt tcttaatttc ccatggcttg catcaacaaa atagctacct
     2161 atttccggtt ttatttgcag gccatttagt tcaagcgttt tattaattga cagaccagct
     2221 tgaagagcga gaagatcaac agcgtttgtt tcgatttttg catctacaag ttgattacct
     2281 gctgaagata aatgatgata acgggcgcta aatgatggga ttatattcac gtttgcagat
     2341 tcccatgctt taccgatact aagccctgtt acaaatactg aacgatctaa ttttactgta
     2401 tttgcttgat aagttaagcg attgcttgct ttcccaaaac cggtatctat cgcaacaaaa
     2461 acaccatttt gccatgtttt cttcgcatac attgatagca ttgttaagcg acctttaccg
     2521 ctataataat ggtcaaaatt atttctcgct tttgattgag ataatatcat accaagtgtg
     2581 acctgattat ctaaggcttt ctctaatcct agatggataa cgttcgcatc ttggttaaat
     2641 ccatatccgg cagagcgatg ctctgtcgtt tgataatctg ttttagacca tactttccaa
     2701 ttttgggtcc cttccgaatg aattacatga tctaatgctg tagttacacc taatacagca
     2761 ttagtttgcg cagttaactc ggatgcgatc aaatgtgcat ttccattgta tttaggtaat
     2821 ggctcagcgg tttcacccga tcctttttct gaatgctcaa tgtctcctgt gtattcaggt
     2881 aacggatcag cagtttcacc cggccctttt tccgaatgct caatgtctcc tgtgtattca
     2941 ggtaacggat cagcagtttc acccggccct ttttcagaat actcaatatc cccggtgtat
     3001 tcaggtaatg ggtcagcggt ttcacttggc cctttttgag taattttagg ttcttcctct
     3061 ttctctggat tgaggtaata cacattccct tctttgagta aatggtagcg atattcgcct
     3121 gagtgcactt catttgctaa attaagagaa aagtcttctt catttgttgt ttcaaataat
     3181 ttaatctttt gggctgaatg ggcgctacca tttgtgctaa tttctatcga aaattgaccg
     3241 cttgcggtgt ctttaattgt gactatatcg ctcgctgttt tcgtcagatc agcgacaaat
     3301 ttaaatatgc cgttccctgt gagggtatta gcggtaagcg tattctgttt ttgggtccct
     3361 tccgaatgaa ttacatgatc taatactgta gttacaccta atacagcatt agtttgcgca
     3421 gttaactcgg atgcgatcaa atgtgcattt ccattgtatt taggtaatgg ctcagcggtt
     3481 tcacccgatc ctttttctga atgctcaatg tcgcctgtgt attcaggtaa cggatcagca
     3541 gtttcacccg gccctttttc agaatgctca atatccccgg tgtattcagg taatgggtca
     3601 gcggtttcac ttggcccttt ttgagtaatt ttaggttctt cctctttctc tggattgagg
     3661 taatacacat tcccttcttt gagtaaatgg tagcgatatt cgcctgagcg cacttcattt
     3721 gctaaattaa gagaaaagtc ttcttcattt gttgtttcaa ataatttaat cttttgggct
     3781 gaatgggcgc taccatttgt gctaatttct atcgaaaatt gaccgcttgc ggtgtcttta
     3841 attgtgacta tatcgctcgc tgttttcgtc agatcagcga caaatttaaa gatgccgttc
     3901 cctgtgaggg tattagcggt aagcgtattc tgttttgttg cagttggagt gtttaaatgg
     3961 atttggctac catttgcgac attcaagaca tctacaacag tgttggttaa ggttgtccat
     4021 accccagaaa gattaacggt tgaaccattg gcgccattaa atattcctgt tgtactcaag
     4081 ccggttaaat tagcaatact tccatcatta agttgaacct tagtggactc ctgagctgta
     4141 attgagccag ttaagtctgc tttactgcct aacgaaaatg ttgaattgtc agctaaagag
     4201 acattgccag ccactttggt tctctcccag ctgtttaaat cagtctctga taaagtagcg
     4261 ttaatattac aggttgctac gcctgtgcgg tcagagcgaa tacatgcttg tgaggtacct
     4321 tgggtaaaac caatttgagc ggtagcatta tctgttaaat taaaattacc gttaatattg
     4381 gcaacattac ggctgatttc aagcttgcca ttgtctttag ctgcaaagat tgttgcgttg
     4441 aacgatcggt tgatccagtc gccttcaatc aggacttctt tattcgctac tttatcatag
     4501 gcatgaggtg ttggacggcc cgataaaatg atttcgcttg taccttctgc agaaagcgta
     4561 ccgttgaggt tcgttccccc agtgataagc aatttgccgt ttgc
//
LOCUS       DANLTI010000159         4465 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.160, whole genome shotgun sequence.
ACCESSION   DANLTI010000159 DANLTI010000000
VERSION     DANLTI010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4465
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.160"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            47..1492
                     /locus_tag="PXB09_002449"
     CDS             47..1492
                     /locus_tag="PXB09_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234507.1"
                     /translation="MRSTFKLTLAALAVSIVLSGCKSSQGPSIVADSPPPKEITATDG
                     NDKEKTDNKEKKSAQPNKSDPQPDKPANAKDPVKPDAETNKPSKKDKEYTPPATEKID
                     NSSVQPDKMVPNPIENKENDSNKPNPKESDSDNNDKVTEGNKPNAPTETVNKDKEAEK
                     SKKENKEDSSNNTPNINFDGAKPIDTDSKGSPYRVINLNPRKSVVNASAMQKVDFDSF
                     TDESVENSPFVSSDTEKEYNNTLVFGLGAGDKDSYFKNLNQKGDKHLGIHSGVYEDAN
                     LEGNTKKINYLYVNQPYSSYGALFTDQKDSHLFNVRLTAGRENGDSYAEYGVFTQSGK
                     EAKWNDNLIGDATYKGQAIARVIRQVNGEQVAGIPQFDGDVTLNLHLSKEWNESKLNG
                     KIDSQSVGVITLKESEIANPTALRSNIGFGEEVIVENKENLVGDYAVDFTGPQLEEAV
                     GVVELENEAETFSENEVIKYNAVFGVSKAAK"
     gene            1556..2968
                     /locus_tag="PXB09_002450"
     CDS             1556..2968
                     /locus_tag="PXB09_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5234508.1"
                     /translation="MKKIALLALFPMMLFARDPNTTQAYIEHTAQPTTTPQRVKIEKS
                     VPIFNETELRANQLLTEKLLIQAIYSRRLANMEKLTAIYRDFTHIDPVLLRYAQGKIA
                     LLKGDYAQAIQHFQTILAKQPKLNTVRIELAIALLYDQQLNQAQAQFEKAKSAEHLPP
                     KVHALIEQYQQHLAKKQEWKFSFSANYVRDGNINRTSKQPNIEQTGYVKQPNLLPQTA
                     HGVHYAFGLQRDFNLFDSHYVSFDNQTQGELYWDNHDYDEITNRTLFGYAYKKSDQTT
                     RLLPFYEKRWKHHRSERWTNGIRLEHAQWFSPHWQLATALEYGKKRYFDLPIYNGSYK
                     LASATLLWLRNPQQFFFVGTDFNQDKTQLKQYSSDTKGIRFGWQREWQALELSSRLTL
                     GYTDRRYKDTAILGGKLNLGRIRHDRVQSANLTLWKRDWHWLGLMPKLQFSYAKHRSN
                     LPSLYAYTDKNINLIIESRF"
     gene            complement(3218..3541)
                     /locus_tag="PXB09_002451"
     CDS             complement(3218..3541)
                     /locus_tag="PXB09_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin"
                     /protein_id="HDL5234509.1"
                     /translation="MQKAYQIYTHSEREKVTEAKLELGKVETRLRNEGKTKEEIAQHP
                     EYLQLKRDLNDKQQTFDNAYGTGSKTKRAVDAVTAALQGLAAKDSGQAAVGLASPYLN
                     EQIKK"
     gene            complement(3510..4037)
                     /locus_tag="PXB09_002452"
     CDS             complement(3510..4037)
                     /locus_tag="PXB09_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5234510.1"
                     /translation="MRDKNKERQQTLERYQELYDQDPELRVIAANSEGDLDLLQETFF
                     VKGELTITDSTPKEKWNWLHMCNLNSYSPSPLSVVEFYIKHGVDVNAQDCYGMTPLHY
                     AMRAKNVDAAIALLNAGADPNIENKDQVIPLSMIGAVPKEIELIEHDISEVKETQELV
                     KGIGEIAEGLSDLHA"
     gene            complement(4039..4251)
                     /locus_tag="PXB09_002453"
     CDS             complement(4039..4251)
                     /locus_tag="PXB09_002453"
                     /inference="COORDINATES: protein motif:HMM:NF025767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/ENDO VII family nuclease"
                     /protein_id="HDL5234511.1"
                     /translation="MYCWEHRRLSLAAKELNWSQKQFNDYVNARPENFRLENISENRS
                     HKNEMPGKDNIKSIIDDMKKFQQIGK"
     gene            complement(4266..>4465)
                     /locus_tag="PXB09_002454"
     CDS             complement(4266..>4465)
                     /locus_tag="PXB09_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5234512.1"
                     /translation="NQDNLIPLSMIGYLPDRLDVLELMLEKGANVHFLVNKNETILES
                     YKPTEMEPNLAPIYELMLKYA"
BASE COUNT         1430 a          935 c          800 g         1300 t
ORIGIN      
        1 atatatccat taaaatttta tggatttaat ctgacggaga caaaatatgc gttctacatt
       61 caaacttact cttgcagctt tagctgtttc tattgtttta agtggctgta aatctagcca
      121 aggtccatct attgttgcag acagccctcc acctaaggaa ataacagcta ctgatggcaa
      181 cgataaagag aaaaccgata acaaagagaa aaagtctgcg caaccaaata aatccgatcc
      241 tcaaccggat aaacctgcta acgcaaaaga cccagtaaaa cctgatgcgg agacaaataa
      301 accaagtaaa aaagataaag aatatacacc acctgctact gaaaaaatcg ataactcatc
      361 agtacagccg gataaaatgg tgcctaatcc tatcgagaat aaggaaaacg acagtaataa
      421 acctaacccc aaagaaagcg atagcgataa taatgacaaa gtcactgaag gcaataaacc
      481 aaatgcccca acagaaacag taaataaaga taaagaagct gagaaaagta aaaaggagaa
      541 taaagaggac tcaagcaata atactcctaa cattaatttt gacggggcaa agcctataga
      601 tacagatagt aaaggtagcc cgtaccgagt aataaaccta aatccgagaa aaagcgtagt
      661 aaatgcaagt gctatgcaaa aagtagattt cgactctttt acggatgaat ctgttgaaaa
      721 ttcaccattt gtcagtagcg atactgaaaa agaatacaat aatacacttg tttttgggct
      781 tggtgccgga gataaagatt cttattttaa gaacttaaat caaaaagggg ataaacattt
      841 aggtattcat agtggcgtgt atgaagatgc gaatttagaa ggtaatacta aaaaaattaa
      901 ctatctctat gtaaatcaac cttattcgag ctatggtgct ttatttacgg accaaaaaga
      961 cagccattta ttcaacgttc gtctgaccgc tggtagagaa aatggagata gttatgccga
     1021 atatggtgta ttcacacaat caggaaaaga agctaaatgg aatgataacc tgattggtga
     1081 tgccacttac aaaggtcaag ctattgctcg cgttattcgt caggtaaatg gggaacaagt
     1141 cgcaggtatt cctcaatttg atggtgatgt tacattaaat ttacaccttt ccaaagaatg
     1201 gaatgaaagt aaactaaacg gcaaaattga tagccaaagt gttggggtaa ttacacttaa
     1261 agaaagtgaa atagctaacc ctaccgcact ccgctcaaat attggttttg gagaagaagt
     1321 catagttgag aataaagaga atcttgtggg tgattacgct gtcgatttta ccgggcctca
     1381 gcttgaagag gcggtaggcg ttgttgaatt agaaaacgaa gccgagacat tctctgaaaa
     1441 tgaagtcatt aaatacaatg cggtatttgg cgtaagcaaa gcggcgaaat agtatttttt
     1501 gtatcttaca aagggctgtt aagccctttt atttttatta ttttaaggat aaaaaatgaa
     1561 aaaaattgcc ttactggcac ttttcccaat gatgttattt gcccgagatc ctaatactac
     1621 acaggcttat attgagcata ctgcacagcc aactacaacc ccccaaaggg tcaagatcga
     1681 aaaatcagtg cctattttta acgaaactga attacgtgct aatcaattat tgaccgaaaa
     1741 gctacttatc caagctattt atagtcgtag gcttgctaac atggaaaaat taactgcgat
     1801 ttatcgggat tttacccaca ttgacccggt tttactgcgt tatgcacaag gtaaaattgc
     1861 cctactgaaa ggcgattacg cacaggcaat tcagcacttc caaaccattc ttgccaaaca
     1921 acccaaacta aacactgtaa gaattgagct ggcgattgct ctattgtacg atcagcaact
     1981 taatcaagcc caagcacaat ttgaaaaagc caaaagtgcc gaacatctac cgcctaaagt
     2041 tcacgcatta attgagcaat atcagcaaca tctggcaaaa aaacaggaat ggaaatttag
     2101 tttttcagcc aattatgtgc gagacggcaa cattaaccga acctcgaaac agccgaacat
     2161 tgagcaaacc ggctatgtaa aacaacctaa tttgttgccc caaaccgcac atggtgttca
     2221 ctatgcgttt ggattacaga gagatttcaa cctgttcgac tcacactatg tgagttttga
     2281 caaccaaacc caaggtgaac tttattggga taaccacgat tatgatgaaa ttaccaatcg
     2341 caccttgttt ggatacgctt acaaaaaatc cgaccaaacc acccgcttgt taccgtttta
     2401 tgaaaaacgc tggaaacatc accgttcgga acgctggaca aacggaattc gacttgaaca
     2461 cgcacaatgg ttttcaccgc attggcaact cgccaccgca ttggaatacg gcaaaaaacg
     2521 ttattttgat ttgccgattt ataacggcag ctacaaactt gcctctgcca cattgctttg
     2581 gttacgcaat ccacaacaat ttttctttgt cggcactgat ttcaatcaag acaaaactca
     2641 gttaaaacaa tatagctctg atactaaagg catacgcttt ggctggcaac gagaatggca
     2701 agccctcgag ctttccagtc gcctcacgct tggctatact gacagacgtt acaaagacac
     2761 cgctatattg ggaggaaaac ttaatcttgg cagaatccgc catgaccgtg tgcaaagtgc
     2821 taacctcacg ctttggaaac gagattggca ctggctcggc ctgatgccga agctgcaatt
     2881 tagttacgcc aaacaccgta gcaacctgcc gagcctctat gcctacaccg ataaaaacat
     2941 caatttaatt attgaaagtc ggttctagct ccataaaaac aacaagcggt taaaattcct
     3001 agaaattttg caaattgcaa aaaatgtaga aaatttaacc gcttgtatct atactgcagc
     3061 ttcttttcct tcagtataaa ttaatataca ccgttgcaac aataatggct gctccctgtc
     3121 atcaccttga actgaaaatt gctcaaggtg gatatgacta tcgcagccgc ttccaccgca
     3181 cccagtaatg tatgggcaag caggttggct tgggtatcta ctttttaatt tgttcgttga
     3241 gatatggcga agctaagcct actgctgctt gtcctgaatc tttcgccgct aaaccttgta
     3301 aggctgccgt caccgcatcc accgcacgct tggttttgct gcccgtgccg taggcgttat
     3361 caaaagtctg ctgtttatcg tttaaatccc gttttaattg gagatattca ggatgttgag
     3421 cgatttcttc ttttgttttt ccctcatttc tcaaacgggt ttccactttg cccaattcca
     3481 gcttcgcttc cgtcactttt tcacgctcac tatgcgtgta aatctgataa gccttctgca
     3541 atctcgccta tgcccttcac cagctcctgt gtttctttca cctcactaat atcgtgttct
     3601 attaactcta tctctttagg aactgctcca atcatagaca atggaataac ttgatcttta
     3661 ttttcaatat tcggatctgc ccccgcattt aataatgcta tcgctgcatc aacattcttt
     3721 gccctcattg cataatgtaa aggggtcatt ccgtagcaat cttgggcatt aacatctacc
     3781 ccatgtttaa tgtaaaattc gactacagaa agaggagatg gtgaataact atttaagtta
     3841 cacatatgta gccagttcca tttttctttt ggtgtgctat ccgtaatagt cagttcacct
     3901 tttacgaaaa atgtttcttg taaaagatcg agatcgcctt ctgagtttgc tgcaataact
     3961 cttaattcag gatcttgatc atataattct tgataacgtt ctaatgtctg ctgacgttct
     4021 ttattcttat ctctcatttt actttcctat ttgttggaat tttttcatgt catcgattat
     4081 tgatttaata ttatctttcc ccggcatctc attcttatga ctccgatttt cagatatatt
     4141 ttctaatctg aaattctccg gtctcgcatt aacataatca ttaaattgtt tttgactcca
     4201 atttaattct tttgccgcta atgataatcg gcgatgttcc cagcaatata tattctatgc
     4261 atgcactaag catatttcag cattagttca tatataggtg ctaaattagg ctccatctct
     4321 gttggtttat agctttccaa tatcgtttca tttttattaa ctaaaaaatg tacattcgca
     4381 cctttctcta acataagttc taaaacatct aatctatcag gtaaataccc tatcattgat
     4441 aaaggtatta aattatcttg atttg
//
LOCUS       DANLTI010000160         4429 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.161, whole genome shotgun sequence.
ACCESSION   DANLTI010000160 DANLTI010000000
VERSION     DANLTI010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.161"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            143..1177
                     /locus_tag="PXB09_002455"
     CDS             143..1177
                     /locus_tag="PXB09_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5234513.1"
                     /translation="MKLKKLSLALSTLLLGSAFANSALAEGRLTVYCSATNELCEQEV
                     QAFGKKYNVKVAFVRNGSGSTLAKIEAEKNNPQADVWYGGTLDPHSQAAEMGLLEPYK
                     SPNLEQIIEKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPR
                     LAGEIQIADPQSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTA
                     RGETAIGIGFLHDYAIEKKNGANIEMTAPTDGTGYELGGVSILKGARNLDNAKLFVDW
                     SLSKEAQELSWQKGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLID
                     KWVNEVKLAK"
     gene            1245..3175
                     /locus_tag="PXB09_002456"
                     /pseudo
     CDS             1245..3175
                     /locus_tag="PXB09_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016534092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
     gene            3273..4322
                     /gene="fbpC"
                     /locus_tag="PXB09_002457"
     CDS             3273..4322
                     /gene="fbpC"
                     /locus_tag="PXB09_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric ABC transporter ATP-binding protein"
                     /protein_id="HDL5234514.1"
                     /translation="MNNDFLVLKNVTKSFGKVTVIDNLNLSIPQGKMVTLLGPSGCGK
                     TTVLRLVAGLENPTSGQIFIDGEDVTQSSIQHRDICIVFQSYALFPHMSIGDNVGYGL
                     KMQGVPKEERLQRVKEALELVDLGGFEDRFVDQISGGQQQRVALARALILKPKVLLFD
                     EPLSNLDANLRRSMREKIRELQQRLNITSLYVTHDQSEAFAVSDEVIVMNKGKIMQKA
                     PAKELYLRPNSLFLANFMGESSIFEGTIAGNQININGYQFTLANAEQFELPDGEYLVG
                     IRPEAIHLAEQGNISQLCKIKNAVYMGNHWEIIAEWEGKDLLVNTKPENFYPHIKQAY
                     VHFIEQGVFLLKKEL"
BASE COUNT         1186 a          968 c          982 g         1293 t
ORIGIN      
        1 aactactacc acctatgaat tgcaaatttt ttcacaattt aggccgcttg ttgattgaac
       61 tgtgagcttg ctcacagaat tttatggtat ttcttgctat attgtatagc aatctatgcg
      121 ataactcatt aaggaaataa aaatgaaatt aaaaaaatta tctttagcac tctcgacttt
      181 attactcggt tcagcctttg ccaactctgc tttagcggaa ggtcgtttaa ccgtttattg
      241 tagtgccact aatgaacttt gtgagcaaga agtgcaagca ttcggcaaaa aatataatgt
      301 taaagtagca tttgtgcgta atggttcagg cagtacattg gcgaaaattg aagcggagaa
      361 aaacaatcct caagctgatg tatggtatgg cggtacttta gatccacatt cacaagctgc
      421 agaaatgggt ttactcgagc cgtataaatc accgaatctc gaacaaatta tcgaaaaatt
      481 ccgtgatccg gcaaaattaa aaggcaacta ctcttcggct gtgtatatgg ggattttagg
      541 ttatggtgtg aatttagacc gaatcaaaaa actcggcatt gaaaaagtgc ctagcacttg
      601 ggaagacttg ctcgacccac gcctagccgg tgaaatccaa attgccgacc cacaaagctc
      661 cggcacggct tatactgcga ttgcgacctt cgtacaactt ttaggagaag aaaaagcctt
      721 cgactatttc cgcaaattac acaaaaacat ttcacaatat accaaatccg gcatcacacc
      781 ggcacgcaat accgcccgtg gtgaaaccgc tatcggtatc ggtttcttac acgactatgc
      841 gattgagaag aaaaacgggg ctaacattga aatgaccgca ccaacagacg gcacaggcta
      901 cgaattaggt ggtgtgagta tcctcaaagg tgcaagaaat cttgataatg caaaactgtt
      961 cgtggattgg tcgctttcta aagaagctca agaactctct tggcaaaaag gcaatgcgtt
     1021 ccaagtatta accaacacca ccgcagaatc ttccccttat gctctagatc cgaaaaactt
     1081 aaacttaatc aactatgatt tcgagaaata cggctcgagc gaagagcgta aacgcttgat
     1141 tgataagtgg gtaaatgaag taaaattagc gaaatagtgt taatctttcc actgagggga
     1201 taagcaatta tcccctctct aattataaga atctgtgagg tgttatgcag aatttttcct
     1261 tttcccgacc gcttgtttgg gtgcttatcg ggttactcgg ttttctcttg ttaccgtcta
     1321 aagccttaga ttatgggctg tttgactcaa cctctgatga actgctcgcc gcaatgggct
     1381 gggcgtgctg ttcgccttta ttttcctgtc agcgattgtg ctgaaaatca gcctcggtta
     1441 tgcggtgttg ccgttgatta ttgccattat ggggcttgcg accccaaatt tagcaacgct
     1501 caaagtaatg cagggtgacc gctttattat cggctcgtta ctgagcatta ttctgctgat
     1561 tttctttttt attgtgtatc cgaccatcgc catttttgtg tcgatgttct acaacggctc
     1621 ggaatttgtg ccaagccaag tgctgacaat tttgcaacaa ccttatgtcg ttcgagtcat
     1681 cggtaactcg ctctcggttg ccggcacggt gggcgttctc tccaccctat tcggcttagc
     1741 ctttgctctc tacaccactc ggattgctaa acgctcggcg tttatcgggc ggattttctc
     1801 gattttacct atcgtcaccc cgccgtttgt ggtcggttta ggcgtaaccc tgatgcttgg
     1861 gcgttccggc tatgttactg aatttttagt ggattacttt ggctttgcca acaattggct
     1921 gtacggtttc accggtattg tgatagccca taccctcgcg ctcacgccaa tgtcgtttat
     1981 gattttggaa ggggcattga aatccattca cccatcggtg gaagaagcag cttacaccct
     2041 gcgttccaac cgctatcaag ccttttttaa cattattttc ccattgttaa aaccggcatt
     2101 ggcaaactcc tttttagtgg tggcaattca atccctcgcc gatttcagta cgccgttagt
     2161 attgggcggt agctttgatg tgattgcaac ccaaatctac ttctacattg ccggttctca
     2221 actggattat gcctctgcta gcacgcttgg ggcaattttg ttggtgttct ccttagccat
     2281 tttcgtgatc caatacctct ggatcggcaa tcgctcttat gtgacggtgt ccggcaaatc
     2341 ctatcggggt gatgtccaag acttaccaag cggtatgaaa tggctgatta tttgcacctt
     2401 attgttctgg ggaaccttca acttagtgct gtacggcagt attttctacg gcagtttcac
     2461 cgtgaactgg ggtgtggatt ataccttaac ccttgataac tacatcaagc tattcgggca
     2521 agggtttagc gatggcggtt tcccttcgtt aattcaaacc gtgattttcg ctgccgctgc
     2581 cgccccgatt actgcactat tcggcttgct gatcgcctat gtgacagttc ggcgtgattt
     2641 caaaggcaag aaaaccctgg aatttttaac cctgctctgc tttgccgtac cgggaacggt
     2701 ggcaggtgtt tcttacattc tcgcctttaa cgatgccccg atttacctaa ccggcaccgg
     2761 tatgatcatc attctctcaa tggtaatgcg gaatatgcct gtgggtatgc gagcggcaat
     2821 tgccggctta gggcagttgg ataaatcgct ggacgaagcc tcgctctcgc tgaaagccgg
     2881 ttcgttcaaa acgatgctgt ttgtggtgtt accgctactc aaaccggcac tgctctccgc
     2941 cctcgtcacc agctttgtgc gggcaatgac gactgtcagt gcgattgtat tcttagtcac
     3001 cgccgacact cgtgtggcaa cctcctacat tctcaaccgt gtggaagacg gtgaatacgg
     3061 cattgcgatt gcctacggct caattttaat tgtggtgatg atggcgatta tcctgatttt
     3121 tgactggatt gtcggcgaca cccgtatcgc ccgttctaag gcgaaaaaaa tgtaaaaaga
     3181 catctactct ctccctttat gggagagaga cagaaaaata cttcgttcag aagtattttt
     3241 cagagagagg gatataatta aaaggacaat atatgaacaa cgatttctta gtattaaaaa
     3301 acgtcaccaa atctttcggc aaggtgacgg tcattgataa tctcaacctc agtattccgc
     3361 aaggtaaaat ggtgacatta ctcgggccgt ccggctgtgg taaaaccacc gtactgcgtt
     3421 tagtggcagg gctggaaaac ccgacttcgg ggcaaatttt tattgatggc gaagatgtta
     3481 cccaaagttc gatccaacac cgtgatattt gcattgtgtt ccaatcttat gcgttatttc
     3541 cgcatatgtc gattggcgat aatgtcggct acggcttgaa aatgcagggc gtaccgaaag
     3601 aagaacggct gcaacgagtg aaagaggcgt tggaattggt ggatttaggc ggctttgaag
     3661 atcgctttgt cgatcaaatc tctggcggac aacaacaacg tgtcgccctc gcccgtgcct
     3721 taattctgaa accgaaagtg ctactgttcg atgaaccgct gagtaacctt gacgctaact
     3781 tacgccgttc aatgcgggag aaaatccgtg aattacagca acgtttaaac attacttccc
     3841 tttatgtgac tcacgatcag tccgaagcct ttgcggtttc agatgaagta attgtgatga
     3901 acaagggaaa aattatgcaa aaagctccag ccaaagagtt ataccttcgc cctaattctt
     3961 tattcttagc aaattttatg ggtgaaagca gcatttttga aggcacgata gctggcaacc
     4021 aaattaatat aaatggatat caatttacgt tagcaaatgc tgaacaattt gagttacccg
     4081 atggggaata cttagttggc attcgtccag aagctattca tttagctgaa caaggaaata
     4141 taagtcaact ctgtaaaatt aaaaatgcag tttatatggg aaatcattgg gaaattatag
     4201 ctgaatggga agggaaagat ttattagtca atactaaacc tgaaaatttt taccctcata
     4261 tcaaacaggc ctatgtacat tttatcgaac aaggtgtttt tcttttaaag aaagagctat
     4321 aacgaattta tactaaatta agaggaaggt agttataact atttagcaat tttgagaaaa
     4381 ataggccgca tgcaaaatct cttgatgaca agcggtcttt tctcgccga
//
LOCUS       DANLTI010000161         4421 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.162, whole genome shotgun sequence.
ACCESSION   DANLTI010000161 DANLTI010000000
VERSION     DANLTI010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.162"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(232..999)
                     /locus_tag="PXB09_002458"
     CDS             complement(232..999)
                     /locus_tag="PXB09_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL5234515.1"
                     /translation="MSKIIKIGKVANNSDAIDAISTQPRHSVIVGTIKRLQTDRIDLL
                     YQHRVDPNVPIEEVAGAIKDLMKQGKVLNWGLSEAGEKTIRKAHAIQPLTAVQSEYSL
                     FFRGREKDVILVCEELGIGFVPWSPLAMGALAGYVDENSRFEADPSKDLRGIIPRFTP
                     EAMQQNVKLIQLVQKWAKRKLCTPAQLSLAWLMAQKAFIAPIPGTSKARHLLDNLGAD
                     DVKFTEEELAQFRQELEAIEIVGLRLPEAILNFSEAK"
     gene            998..1318
                     /locus_tag="PXB09_002459"
     CDS             998..1318
                     /locus_tag="PXB09_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234516.1"
                     /translation="MELKVIHKNLVDSAKIKLHAVYLVIFLFVSHFAMIFGMADPISA
                     GYQPTTPAMTHSMQMDAKQITEMHNQMMTGEITPEEMMKMHQEMNPNMNMPNTQGGHS
                     EHHK"
     gene            1500..1955
                     /locus_tag="PXB09_002460"
     CDS             1500..1955
                     /locus_tag="PXB09_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDL5234517.1"
                     /translation="MKLHKFTRSLLLLSLGITAFAQAQTLSMEVWKSPTCGCCNEWIS
                     YMQKNGFEVKVNETGNYDAHKRFNIKYEHASCHTAVIDGYVIEGHVPAEDIKRLLAEK
                     PDAIGLSAPGMPIGSPGMDGEAYGGRKDPYDVVLIKKNGESEVFKSYNQ"
     gene            1969..3516
                     /locus_tag="PXB09_002461"
     CDS             1969..3516
                     /locus_tag="PXB09_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HDL5234518.1"
                     /translation="MKRRDFLRYGIGISLASSSLYSLANMMNHAQHGNMAMMHSVPTG
                     LMPTEAMPSGLSLNGILPKLANQSTQAGLFKATLKAEPIKIRLADNKETEFWAYNGQL
                     PGPQIEVFEGDTVEIEFINHLPQPSTVHWHGLDVPNEADGNPMDMVEPQGKKVYRFTL
                     PQGSAGTYWYHPHPHDHVSEQVYKGLAGTFVVKAKNDPLAHLPEQHWVISDLRLNADG
                     TIPANTMLDWINGREGEFVLINGQYQPQIQVKTNERIRLWNATSARYFRLNIPGVKWI
                     VVGTEGGLLEKPRSPVDELLLTPAERVEVIMVGETQGTVNLQSGYYDRRKMMVQEQPK
                     DLTLATIQVKSEPVQLPESLRSLPNWDEPKQVRQIRFSEKMMNHTNMPMMNHGTHHAT
                     TTLTDNPIPPMMNGMFLINGQTFDMNRIDFVTKLNEVEQWEIFNESHMDHPFHLHGTQ
                     FEVIQHTLNGKTFKPEGRALKDVVNLRPYEKVIIRFKQGHTGLKMYHCHILEHENLGM
                     MGMFKVE"
     gene            complement(3606..3761)
                     /locus_tag="PXB09_002462"
     CDS             complement(3606..3761)
                     /locus_tag="PXB09_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL5234519.1"
                     /translation="MGLNRAEMMYREGAYVIDPVFPATLGYAGAGVVVAVGDDAGEFQ
                     IGDKVSV"
     gene            3850..4029
                     /locus_tag="PXB09_002463"
     CDS             3850..4029
                     /locus_tag="PXB09_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234520.1"
                     /translation="MFLVNQLLAITIATSAVLTNAQLAILAVAFWIAILPCARLATAV
                     GVWVFDDVVHNNSPN"
     gene            4078..>4421
                     /locus_tag="PXB09_002464"
     CDS             4078..>4421
                     /locus_tag="PXB09_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234521.1"
                     /translation="MPFKTVTFAQATTNDGQSLLAVNDLFIGPKSHTSAQYILQWNGA
                     EEVQSSSGIIVSTGLGSTGWFQSILAGAMAITGEASHPLLQGFSWSDRKLQFSVREPF
                     PSRTTGVALTFGT"
BASE COUNT         1358 a          915 c          890 g         1258 t
ORIGIN      
        1 aaattcattg agttgattat gccattttta cacttattga ctatagcgtt ttgcctaatc
       61 atctgtctga ttccagtttt acccttttcc caatatcttt caatttcgat aaatcttcca
      121 ctaatcttgc tacatattca agaaaaagtg cgatcgtttt tcaaaggatt ttatgaaaac
      181 gaccgctgta agaaagaatt tttatttacg actttttcag gtatctgaaa actatttcgc
      241 ttctgaaaaa ttcaaaattg cttcaggcaa acgcaagccg acaatttcaa tggcttctaa
      301 ttcttggcgg aattgcgcca attcttcttc ggtaaatttc acatcgtctg cgcctaaatt
      361 atccaacaaa tgacgggctt tgctcgtccc aggaattggc gcgataaacg ctttctgtgc
      421 cattagccag gccaaagaaa gctgtgcagg cgtacaaagt ttgcgttttg cccatttttg
      481 cacaagctgg attaacttca cattttgttg catcgcttcg ggtgtaaagc gtgggataat
      541 accacgcaaa tctttgcttg gatcagcctc aaaacggctg ttctcgtcca cataaccagc
      601 caatgctccc attgccagcg gcgaccaagg cacaaaccca atccctaatt cttcacaaac
      661 gagaatgaca tctttttcac gaccacggaa aaacaacgag tattcgcttt gtacggcggt
      721 taaaggctga atagcgtgtg ccttgcgaat ggttttctcg cctgcttccg acaagcccca
      781 attcaaaact ttgccttgtt tcattaaatc tttaatagcg ccagccacct cttcaatcgg
      841 cacattggga tcaacacggt gttgatagag taagtcaata cggtcggttt gtaagcgttt
      901 tatcgtaccg actattactg aatggcgtgg ttgggtagat atcgcatcaa ttgcatcact
      961 attattagct acctttccta tttttattat tttactcatg gaattaaaag ttattcataa
     1021 aaatctcgtg gatagtgcaa aaattaaatt acatgcggtt tatcttgtga ttttcttatt
     1081 tgtgagtcac tttgctatga tctttggcat ggcagatcct atttcagcag gctatcaacc
     1141 cactacacca gcaatgactc attcaatgca aatggatgct aaacaaataa cagaaatgca
     1201 caaccaaatg atgacgggcg aaataacgcc tgaagaaatg atgaagatgc atcaagaaat
     1261 gaaccctaat atgaatatgc cgaatactca aggtggtcat tcagaacatc ataaataata
     1321 attctgatca cattttaaaa aataatagtg gatggtacgt tggcatatct ctactacaag
     1381 cagtaggatt ttgagaaaaa ttttcaaatg atagaatttt ttcagattac ttgaccttaa
     1441 ccctaggtta agctttaaaa tgatgtccat tcaatctcaa taaaaaataa ggacatctta
     1501 tgaaattaca taaattcacc cgctcattgt tgcttttaag tttaggcata accgcttttg
     1561 ctcaagcaca aacactttct atggaagtgt ggaaaagccc gacttgtggc tgttgtaatg
     1621 aatggatcag ctatatgcag aaaaacggtt ttgaggttaa agtcaacgaa acaggcaatt
     1681 atgatgctca taagcgcttt aacattaaat atgaacatgc ttcttgccac acagccgtga
     1741 ttgatggcta tgtgattgaa ggacatgtac ctgctgagga tatcaaacgt ttactcgcag
     1801 aaaaacccga tgcaataggc ttgtctgcac cgggaatgcc aattggttca ccaggtatgg
     1861 acggtgaagc atacggcgga cgcaaagatc cttatgatgt tgttttgatt aagaaaaacg
     1921 gtgaaagtga agtgtttaaa tcctataacc aatagggggg gggaaagaat gaaacgtcga
     1981 gattttttac gttatggaat tggaattagc ttagccagta gctcgcttta tagcctcgcg
     2041 aatatgatga accacgcaca acatggcaat atggcgatga tgcattcagt acctactggc
     2101 ctaatgccaa ctgaggcaat gccttcaggt ttatcgctta atgggatatt accaaaactt
     2161 gctaatcaat cgactcaagc tggactgttc aaagccactt taaaagcaga gccaattaaa
     2221 attcgcctcg cagacaataa agaaacggaa ttttgggctt ataacggaca actaccaggg
     2281 ccacaaattg aagtatttga aggagatacc gtagaaattg aatttatcaa tcacctacca
     2341 caaccctcaa cagtacattg gcacggctta gatgtaccaa atgaggcgga tggtaacccg
     2401 atggatatgg ttgaaccgca agggaaaaaa gtctatcgct ttacgctacc tcaaggcagt
     2461 gctgggacat attggtacca ccctcatcca catgaccatg tttccgaaca agtctataaa
     2521 ggcttagcag gcactttcgt tgttaaagcg aaaaatgatc cgcttgcaca ccttcctgaa
     2581 caacattggg tgatttccga tctgcgttta aatgccgatg gcaccattcc agcaaacacg
     2641 atgttagatt ggataaacgg tcgtgagggt gaatttgtgt taatcaacgg tcaatatcag
     2701 ccccagattc aagtgaaaac gaatgaacga atccgtcttt ggaatgccac tagcgctcgt
     2761 tattttcgtt taaacattcc aggggtgaaa tggattgtgg tgggtaccga aggtggttta
     2821 cttgaaaaac ctcgctcgcc tgttgatgaa ctgctactta caccagccga acgcgttgaa
     2881 gtgattatgg tgggtgaaac gcaaggaaca gtcaatttac aaagcggtta ttatgatcgc
     2941 cgtaagatga tggttcaaga acagcctaaa gatctcactt tagccacaat tcaggtgaaa
     3001 tcagaacctg ttcagttacc tgaaagctta aggtccttgc ctaactggga tgagccaaag
     3061 caggttcgcc aaattcgctt tagtgaaaaa atgatgaacc atacgaatat gccaatgatg
     3121 aatcacggta cacatcacgc tactacaaca ctaacggaca accctattcc accaatgatg
     3181 aatggtatgt tcttaatcaa cggtcaaacc tttgatatga accgtattga ttttgttacc
     3241 aaattgaatg aagtggaaca gtgggaaatc ttcaatgaaa gccatatgga tcatccattc
     3301 catttacacg gcactcaatt tgaagtaatt caacatacgt taaacggtaa aacctttaag
     3361 ccagaaggca gagcgttaaa agatgtggtt aatttacgcc cttatgaaaa agtgattatt
     3421 cgctttaagc aaggacatac tgggttgaaa atgtaccatt gccatatttt agaacatgaa
     3481 aatctcggta tgatggggat gtttaaagtg gaatagtggt atctaactat aaaaatagag
     3541 ggatttcgtc ataaaaaatc tgcaccttaa tcagttggtt tttagtccaa cttttggggt
     3601 gcagatcaga cgctcacttt gtcgccgatt tgaaattcgc cagcgtcatc gcccactgcc
     3661 acgaccacgc ctgcccctgc ataacccaaa gtcgcaggga acacagggtc aatcacatac
     3721 gccccttccc gatacatcat ctcggcacgg tttagtccca atgcacggca cggtttttaa
     3781 acattttcat tatagttttc cttatcaaaa tgggatttgg caaacattgg gcaaacctaa
     3841 gcccgcccaa tgtttttagt taatcaatta cttgcaatca caatcgccac aagtgcagtt
     3901 ttgacaaatg cacagctcgc cattttggca gttgcatttt ggattgcaat tttgccctgt
     3961 gcaagattgg caaccgcagt gggcgtttgg gtttttgatg atgtcgttca taacaattct
     4021 ccaaattaaa ggttgattat caaaacaaaa accgttttta aacccattaa taaaaaaatg
     4081 ccatttaaaa cggtcacttt tgcacaagca acaaccaatg atggtcaatc cttattagcg
     4141 gttaatgact tatttattgg ccctaaaagc cacacttccg cacagtatat tttgcaatgg
     4201 aatggcgctg aagaagtgca atcttcatca ggcattattg tatcaacagg attgggatca
     4261 acggggtggt ttcaatctat tcttgctggt gcgatggcaa ttacaggaga agcttcgcac
     4321 cctctattac aaggctttag ctggagtgat cgaaagctac aatttagtgt aagagagcca
     4381 tttccaagta gaacaacagg tgttgcactg acttttggca c
//
LOCUS       DANLTI010000162         4408 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.163, whole genome shotgun sequence.
ACCESSION   DANLTI010000162 DANLTI010000000
VERSION     DANLTI010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.163"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            149..1567
                     /gene="leuC"
                     /locus_tag="PXB09_002465"
     CDS             149..1567
                     /gene="leuC"
                     /locus_tag="PXB09_002465"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDL5234522.1"
                     /translation="MQQAKTLYQKLFDSHVVYEAEGETPIIYINRHLIHEVTSPQAFD
                     GLRVAGRQVRQVSKTFGTMDHSISTQVRDVQQLEGQAKIQVLELEKNCEETGIPLFDI
                     TKKQQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
                     KQARAKSMKVEVRGKVNPGITAKDIVLAIIGKTTMAGGTGYVVEFCGEAIRDLSMEGR
                     MTVCNMAIEFGAKAGIVAPDETTFAYLKDRPNAPKGQDWEDAIEYWKTLKADEGAVYD
                     AEVILEAKDIAPQVTWGTNPGQVIGIDDVIPNPEDMADPVTRASAEKALAYIGLEAHT
                     DMKDVPVDQVFIGSCTNARIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKE
                     GLDKIFIEAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSP
                     AMAAAAAVFGKFMDIRKVSLNA"
     gene            1580..2182
                     /gene="leuD"
                     /locus_tag="PXB09_002466"
     CDS             1580..2182
                     /gene="leuD"
                     /locus_tag="PXB09_002466"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDL5234523.1"
                     /translation="MAGIKQHSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFH
                     EWRYLDAEETQINPDFVLNFPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIA
                     PSFADIFYNNSLNNHMLPIKLTEEEVEEIFQWVWANEGKQIHVDLEAMTVTVGEKVYT
                     FELDEFRRHCLLNGLDNIGLTLQHEAAIAAYEKNIPAFLR"
     gene            complement(2254..2718)
                     /locus_tag="PXB09_002467"
     CDS             complement(2254..2718)
                     /locus_tag="PXB09_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234524.1"
                     /translation="MNKFKIALMATVAIGLFACTPSPQSNSTKQQAQVGYLKQNISQA
                     ELNNPKDFKRYSYYCKNFATGSSSYLATYFPLWSESRKQENFGIYFQLDGGKVYPFDH
                     LANISLNARATKFEVRYRSYQPIEGSFVELVAREFTSTYYKNNVPWLECREG"
     gene            complement(2742..3248)
                     /locus_tag="PXB09_002468"
     CDS             complement(2742..3248)
                     /locus_tag="PXB09_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234525.1"
                     /translation="MADPHIQSPMDFWDYLTVIIYRSGFVLATLMLLLLPYYPQTAQY
                     GLLVSGTMLASSLHLYAKSFRLIFQFSVWIGLLGAVFNFPLLAFGAMLLVIGGLSYKE
                     YFCFRVFGLNFQPLLVAVLWIAFALEWSLLVQILSLVCGLLLLVLSIQKWRMPLHFDI
                     GDKSKYQI"
     gene            complement(3271..4248)
                     /gene="dusA"
                     /locus_tag="PXB09_002469"
     CDS             complement(3271..4248)
                     /gene="dusA"
                     /locus_tag="PXB09_002469"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDL5234526.1"
                     /translation="MTNEIQPFYRGRFSVAPMLDWTTRHCRYFHRQFSRQALLYTEMI
                     TAPAIIHAKYDLLEYDPSENPVALQLGGSDPAQLAHCAKLVAERGYAEINLNVGCPSD
                     RVQNGMFGACLMAKADLVADCIKAMQDAVEIPVTVKHRIGIDDLDSYEFLCDFIEKVQ
                     PYSNDFIVHARKAWLTGLSPKENREIPPLDYDRVYQLKRDFPHLKISINGGIKTIEEI
                     KQHLQFVDGVMVGREAYQNPSMLGEIDSQIFNENRPLVTAKEAVEKMFPYIERELAKG
                     VYLNHIVRHMLGAFQHCKGARQWRRHLSENATKSGAGVEVVEQALAFIG"
BASE COUNT         1368 a          970 c          904 g         1166 t
ORIGIN      
        1 aaacccttat ttagcataaa aatactgttt tactttcatt tttttaatcg ttatattcac
       61 tccatatcag caagcggtca tttttgcaaa attttttgca aatttaaccg cttgtattaa
      121 aagttaccct tttgagttgg aacattttat gcaacaagcc aaaaccctat atcaaaaact
      181 attcgactca cacgttgtgt atgaagccga aggcgaaacg ccgattattt atattaaccg
      241 ccacttaatt cacgaagtta ccagcccgca agcgtttgac ggcttgcgtg ttgccggtcg
      301 ccaagttcgc caagtcagta aaaccttcgg cacaatggac cacagtattt caacccaagt
      361 gcgtgatgta cagcaacttg aagggcaagc gaaaattcaa gtattagaat tagaaaaaaa
      421 ctgcgaagaa accggtatcc cactgtttga catcactaaa aaacaacaag gtatcgttca
      481 cgtaatgggg ccggagcaag gcttaacttt acccggtatg accattgtat gtggtgactc
      541 gcacaccgcc actcacgggg cctttggtgc gttagccttc ggtatcggta cttccgaagt
      601 ggaacacgtt ttagccaccc aaaccttaaa acaggcccgt gcaaaaagta tgaaagtgga
      661 agtccgtggc aaagtaaacc cgggcattac cgcaaaagat attgtgcttg cgatcatcgg
      721 taaaacaact atggctggcg gtacaggcta tgtagtggaa ttttgtggcg aagcaattcg
      781 tgatctttca atggaagggc gaatgacagt gtgtaatatg gcgattgagt ttggtgcgaa
      841 agccggtatt gttgccccgg atgaaaccac gttcgcttac ttgaaagacc gcccaaatgc
      901 accaaaaggt caagattggg aagatgccat tgaatattgg aaaaccctca aagccgatga
      961 gggtgcagtt tacgatgcgg aagtgatctt agaagcaaaa gacattgctc cacaagtgac
     1021 ttggggaacc aacccggggc aggtgatcgg tattgatgat gtaattccaa atccggaaga
     1081 tatggccgat cctgttactc gtgcctctgc ggaaaaagcc ttagcttaca tcggcttaga
     1141 agcccataca gatatgaaag atgtaccggt tgatcaagtc tttattggtt cttgtactaa
     1201 tgctcgtatt gaagatttgc gtgctgcggc agcagtaatg aaagggcgta aaaaagccga
     1261 caatgtaaaa cgtattctcg ttgtgccagg ttcaggtttg gtaaaagagc aagcagaaaa
     1321 agagggcttg gataaaatct tcattgaagc cggtgcagaa tggcgtaacc cgggttgctc
     1381 aatgtgtttg ggaatgaacg atgaccgctt gggcgaatgg gaacgttgtg cctctacgtc
     1441 taaccgtaac tttgagggca gacaaggacg taacggtcgt acccacttag tcagcccggc
     1501 aatggcggct gcggcggcgg tgttcggtaa atttatggat attcgcaaag tgtcattaaa
     1561 cgcataatag gaggaaaaaa tggcaggtat taaacaacat tcaggcttgg tcgttcctct
     1621 tgatgcagcg aacgtagaca ccgatgcaat cattccaaaa caatttttgc aagccattac
     1681 tcgagtcggc tttggtaagc accttttcca cgaatggcgt tatttagatg cggaagagac
     1741 tcaaatcaac cccgatttcg tactgaactt cccacaatat caaggtgcaa ccattttact
     1801 cgcccgtaaa aatttaggct gtggctcttc tcgtgagcac gccccttggg cattggcaga
     1861 ttacggtttt aaagtaatga tcgccccaag ttttgcggat attttctaca ataacagctt
     1921 aaataaccat atgttgccga ttaaattaac cgaagaggaa gtcgaagaga tcttccaatg
     1981 ggtgtgggca aatgaaggaa aacagatcca cgttgattta gaagcgatga ctgtgactgt
     2041 tggcgagaaa gtttatacct ttgagttaga cgaattccgc cgccactgct tattaaacgg
     2101 tttggataat atcggcttaa ccctacaaca cgaagctgcg attgctgctt atgagaaaaa
     2161 cattccggca tttttacgct aattaaaata caaaaaaacg gctaacatct ttaaggcgtt
     2221 agtcgttttc tttttagcca ttttctttgg caattagcct tctcggcact ctaaccaagg
     2281 cacattattt ttgtaataag ttgaagtaaa ctctcgtgcc actaactcta caaaactgcc
     2341 ttcaatcggc tgataagaac gataacgcac ttcaaatttt gttgctcttg cattcaaact
     2401 gatgttggca agatggtcga acggataaac ctttccgcca tcaagttgaa aatagatacc
     2461 aaaattctct tgcttacggc tttcagacca aagtggaaaa taggttgcca aatatgaact
     2521 gctgcctgtt gcaaaattct tacaataata gctataacgc ttaaaatctt tcggattatt
     2581 caattccgct tggctgatat tctgtttcaa atatccaacc tgtgcttgtt gcttagttga
     2641 gtttgattgt ggtgagggcg tacaagcaaa taagccaatt gccactgttg ccattaaagc
     2701 aattttgaat ttattcataa aaatcccgat aaaatattaa attaaatctg atatttgctt
     2761 ttatcgccaa tatcaaaatg cagcggcatt cgccattttt gaatactcag cacaagaagc
     2821 aacaagccac agacaaggct taaaatttgc accaataaag accattctag tgcaaaagca
     2881 atccacaata ccgccactaa aagcggttgg aaatttaagc cgaatactct aaaacagaaa
     2941 tattctttat agcttaatcc gccgatcacc agtagcattg ccccgaacgc aagcaaaggg
     3001 aaattaaaca cagcaccaag taagccaatc caaacagaaa attggaaaat caggcgaaac
     3061 gatttggcat aaagatgcaa agaagatgcc aacattgtgc cagatactaa taaaccatat
     3121 tgtgccgttt gcggataata aggcaataaa agcaacatca atgtagctaa cacaaaaccg
     3181 ctgcggtaaa tgatgacggt taaataatcc caaaaatcca ttggcgattg aatatgtgga
     3241 tctgccataa ctgcctcctt aaacaataaa ttagccaata aacgcaaggg cttgttccac
     3301 tacttctaca ccggctcccg acttagtggc attttcactt aaatgacgac gccactgcct
     3361 cgctcctttg caatgttgaa acgcaccaag catatggcga acgatatgat ttaaatagac
     3421 acctttggca agctcacgtt caatataagg gaacatcttt tccaccgctt cttttgccgt
     3481 tacaagcggt cgattttcat taaaaatttg cgaatcgatc tcgcctagca ttgacgggtt
     3541 ttgataggcc tcacgcccta ccattacccc atcaacaaac tgcaaatgct gtttaatttc
     3601 ctcaatggtt ttaatgccgc cattgatgct aatctttaaa tgcggaaaat ctcgcttgag
     3661 ctgataaacc cgatcataat ctaaaggcgg aatttcacgg ttttccttcg ggcttaaccc
     3721 tgtcagccac gccttgcggg cgtgtacgat aaaatcattg ctataaggtt gcactttttc
     3781 gataaaatca cacaaaaatt catagctgtc taaatcatca atcccaatac gatgtttaac
     3841 cgtgaccgga atttccaccg catcttgcat tgctttaata caatccgcca ctaaatctgc
     3901 ttttgccatc aaacaagccc caaacatacc gttttgcact cggtctgacg ggcaaccgac
     3961 atttagatta atctcggcat agcctcgctc tgccaccaat ttggcacaat gagccaactg
     4021 tgccgggtcg cttccaccca gttgcaaagc caccggattc tcgctcggat catattccaa
     4081 caaatcatat ttggcgtgaa taatcgccgg ggcggtgatc atttcggtat aaagcaaggc
     4141 ttgacgacta aattggcgat gaaaatagcg gcagtgacgg gttgtccaat ctaacattgg
     4201 agcaaccgaa aaacgtccac ggtaaaaagg ttgaatttcg ttagtcataa aaatatcaaa
     4261 ataaagcggt aaaaaatcag taaaaaataa ccgcttgtaa gcgattcaaa acaagcagcc
     4321 atcatactcg aaaaagccag ataaacatag tttcctcaag gcttccccat ctatctgcgc
     4381 acttttaaaa caaccttaaa acacaata
//
LOCUS       DANLTI010000163         4378 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.165, whole genome shotgun sequence.
ACCESSION   DANLTI010000163 DANLTI010000000
VERSION     DANLTI010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4378
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.165"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            14..1282
                     /locus_tag="PXB09_002470"
     CDS             14..1282
                     /locus_tag="PXB09_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5234527.1"
                     /translation="MTQQIEHSTWQSKFAAMGPGILMASAAVGGSHIIASTQSGAIYG
                     WQLAIIILLANLFKYPFFRFGVQYTLASGKTLLEGYKEKGKFYLIIFFILNVFAAMIN
                     TAAVAIVSAAILKFIFSALGIPLDLSIPMAGTIVIVVTWGILLLGQYKFLDTLSKWIM
                     IALTISTVSAVIIAALKGGVEIAPDFVEPSPWNLAALVFIVALMGWMPAPIEISAINS
                     MWVIAKKRLSKVNYEDGIFDFNVGYIGTAILAIVFLALGALVQYGSGEKVEQAGVAYI
                     AQLIKMYAFAIGDWSKLLIAFIAFMCMFGTTITVIDGYSRANAEALRLISGRKQHSQT
                     ELSIWMTVTALIGILIISQFMSDVAKMLQFAMISSFVSTPVFAWLNFSLVLKGEHRAK
                     GWLFWLAVIGLIYLTSFTLLFLAQQFKLIG"
     gene            complement(1345..3402)
                     /gene="ligA"
                     /locus_tag="PXB09_002471"
     CDS             complement(1345..3402)
                     /gene="ligA"
                     /locus_tag="PXB09_002471"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDL5234528.1"
                     /translation="MSLFNQTSLFEENATPELVEKIETIRQTLRQYEYEYHVLDNPSV
                     PDAEYDRLMNELKNLEWQHPELISADSPTQRVGAKPLAGFAQVTHEIPMLSLDNAFSD
                     EDLDGFLRRMESYITASPSQLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEEI
                     TANIRTIRNIPLKLNTTNPPARLEVRGEVFMPQSGFNELNEKALAKGEKTFANPRNAA
                     AGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSLGIPVNNEIRLV
                     QGKAALLAYYAEIQAKRPTLGYDIDGTVLKVNDIALQEQLGFISRSSRWAIAYKFPAQ
                     EEMTILKEVDFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVI
                     IRRAGDVIPQITGVMLERRPENAKKIEFPTACPICHSAVTRVEGEAVARCTGGLFCEA
                     QRKEALKHFVSRKAMDIDGVGEKLIEQLMARELIETPADLFKLDHTTLMRLERMGEKS
                     AQNALNSIEKAKNTTLPRFLFSLGIREVGEATALNLANHFGSLEAIRQATFEQLKEVQ
                     DVGEVVANRIVSFWQEPHNVEVVEDLIAQGVRWENVVKAEIVDNPLKDKNVVLTGTLT
                     QLTRDEAKALLQSLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGIQILSEQQFIEL
                     TQH"
     gene            complement(3467..4369)
                     /gene="zipA"
                     /locus_tag="PXB09_002472"
     CDS             complement(3467..4369)
                     /gene="zipA"
                     /locus_tag="PXB09_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDL5234529.1"
                     /translation="MELHIIFFILAGLLIAVLIGFSLWSARREKSNIFSNTFSTRPIA
                     VPPQNNKMSNSIPTSLQPQNEDYQAMSVPEENPQQIQQEVESSLQNIKISLPGGNPQQ
                     QPEQIQPIQSVAEPTVSTYGQKISNQQHIQYNTPDFANPMVNTVVEETPQAVAIEPQE
                     TQSAEEENPFVTLYLYAPQNEAFRGDFVVHYLEEVGLRFGEHQIFHRHQHIDDSLSPI
                     IFSAANLMNPGTFDLNNISNFATAGLVLFMQLPTEGNDVANMKLLISNAEHLAASLGG
                     FLYDDNQQPFGEESRQRYMQRVMH"
BASE COUNT         1117 a          884 c          983 g         1394 t
ORIGIN      
        1 taaggaaagc tatatgacac aacaaataga acattcaact tggcaaagta aatttgctgc
       61 aatggggccg gggattttga tggcatctgc ggcagtgggt ggttcgcata ttattgcctc
      121 tacacaatct ggtgcgattt atggctggca gctggcgatt attattctgt tagccaattt
      181 atttaaatat ccgtttttcc gctttggtgt gcaatatacc ttagctagcg gtaaaacttt
      241 attggaaggc tacaaagaaa aaggaaagtt ttatcttatt attttcttta tccttaacgt
      301 ttttgctgca atgattaaca cagctgcggt ggcgattgtt tcagcagcga ttctaaaatt
      361 tattttttct gctttaggta ttccgttaga tttaagcatt ccaatggcag gaactattgt
      421 gattgtggtc acttggggta ttttacttct agggcaatat aaattcttag atacattatc
      481 taaatggatt atgattgctt taaccatctc tacggtatct gccgtgatca ttgctgcttt
      541 aaaaggtggc gttgaaattg ctccagattt cgtagagcct tcgccgtgga atttagcagc
      601 acttgtgttc atcgttgcat taatgggctg gatgcctgca ccaattgaaa tttctgccat
      661 taactcaatg tgggttattg cgaaaaaacg tttaagtaaa gtgaattatg aggacggtat
      721 ttttgatttt aatgtgggtt atatcggcac ggcaattttg gcgattgttt ttttagcatt
      781 aggtgcgtta gttcagtacg gttcaggtga gaaagtagaa caagccggtg ttgcctatat
      841 tgctcaatta atcaaaatgt atgcttttgc gattggtgac tggtctaagc ttttaatcgc
      901 atttattgca tttatgtgta tgttcggcac aacgatcact gttattgatg gatattcacg
      961 agcgaatgca gaagcgttgc gtttaattag cgggcgtaag caacattcac aaacagaatt
     1021 aagtatttgg atgacggtaa ctgcactcat cggcatttta attattagcc aatttatgag
     1081 tgatgtggcg aaaatgttac aatttgcaat gatttcatca tttgtttcta cccctgtttt
     1141 tgcgtggtta aatttctctt tagtgctaaa aggtgagcat cgtgcaaaag gctggttatt
     1201 ttggttggca gttatcggct taatttactt aactagcttt acgttactgt ttttagctca
     1261 gcagtttaaa ttgattggtt aatgctttta agcattcaat agatagaata aggggcagat
     1321 ttcaatcatc tgcccctttg tttgttaatg ttgagtaagc tcaataaatt gttgctcgct
     1381 taaaatctga attcccaact cttgagcttt tgccagcttg gaaccggctt tttcgccggc
     1441 gattaagtaa tcggttttgc tggaaaccga gccggagact ttacagccca aactttgtaa
     1501 tagggctttg gcttcatcac gggtgagctg ggttagcgtg ccggttaaga ccacgttttt
     1561 atcttttaac gggttatcta caatttcggc tttcacaacg ttttcccaac gtacaccttg
     1621 agcgatcaaa tcttccacca cttccacatt atgcggttct tgccagaagc tgacaatacg
     1681 gttggcaaca acctcgccca catcttgcac ttcttttaat tgctcaaaag tggcttggcg
     1741 gatcgcctct aagctaccaa aatggttggc taagttgaga gcggttgcct cgcccacttc
     1801 acgaatacct aacgagaata aaaagcgagg aagagtagtg ttttttgctt tttcgatgct
     1861 gttgagagca ttttgagccg atttttcccc cattcgctct aatcgcatta gggtagtgtg
     1921 atcgagctta aacagatcgg caggcgtttc aatcagctct cgagccatta actgctcgat
     1981 tagtttttcg cctacgccgt caatatccat tgccttgcgt gaaacgaaat gtttcaaggc
     2041 ttctttacgt tgagcttcgc agaataaacc accggtacag cgtgctactg cctcgccttc
     2101 tacccgagta acagcggagt gacagatagg acaagcggtc ggaaattcaa ttttttttgc
     2161 attttccggg cggcgttcta acatcacgcc tgtaatttgc ggaattacat cgcccgctcg
     2221 gcgaataatt accgtatcgc caatcacaat accaagtcgc tcgatttcat caccgttgtg
     2281 tagcgttgcg ttacttaccg ttacgccagc gacaaaaaca ggctctaatt tcgccacagg
     2341 ggtgattgcc cctgttcttc ccacttggaa gtccacttct ttgaggattg tcatttcttc
     2401 ttgagccgga aatttatacg caatcgccca acgagaggag cgagagataa acccgagttg
     2461 ctcttgtagg gcaatgtcat ttactttcaa tactgtgcca tcaatatcat agcctaatgt
     2521 tgggcgttta gcctgaatct ccgcataata agccaagaga gcagctttgc cttgaaccaa
     2581 gcggatttca ttatttacag gaataccaag cgatttcagc cattgcaaac gttcgaaatg
     2641 ggtggctggc agttcgtcat cgctttcata caccccaatt ccgtaggcat tcagcactaa
     2701 cggacgctgg cgggtgattt tcggatctaa ctggcgaagc gaacctgctg cggcattgcg
     2761 agggttggca aaggtttttt cgcctttagc taaggctttc tcattcagct cattaaagcc
     2821 tgattgtggc ataaagactt cgcctcgcac ctctaatcga gcaggtggat tagtcgtgtt
     2881 gagctttaac ggaatattgc gaatggtgcg gatattagcg gtaatttctt cgccggttgt
     2941 gccatcgcca cgggttgcag ctcgggtaag tataccgttt tcgtataaaa tactcactgc
     3001 caagccgtct aatttaggtt cgcaacaaaa ttccagttgc gaaggagagg cggtgatata
     3061 gctttccata cggcgtaaaa agccatctaa gtcttcatcg gagaaggcat tatccaacga
     3121 aagcataggg atttcgtggg tgacttgagc aaagcctgcc agcggtttgg caccaacccg
     3181 ttgagtcggc gagtcggcac taatcagttc cgggtgctgc cattccagat ttttcagctc
     3241 gttcattaaa cggtcgtatt cggcatcggg tacgcttggg ttatctaaaa cgtgatattc
     3301 atactcgtat tgacgcaatg tttggcgaat agtttcgatt ttctcgacta actcgggcgt
     3361 ggcattctct tcaaataaag aggtttggtt aaataaagac attggtaaaa ttctctacaa
     3421 aaaagaccgc ttgtacaagc ggtcggattt attaattttt tcgcaattag tgcatcacac
     3481 gttgcatata acgttggcgg gattcttcgc caaaaggctg ttgattatcg tcatataaga
     3541 atccccctaa cgatgctgct aagtgttcag cgttactgat taacaacttc atattagcca
     3601 catcattgcc ttcggttgga agttgcataa atagcactaa accagctgtc gcaaagtttg
     3661 agatattatt taaatcaaag gttcctgggt tcattaaatt tgctgcactg aaaataatcg
     3721 gacttaatga atcatcaata tgttgatggc ggtggaaaat ttggtgttcg ccaaaacgta
     3781 agccaacttc ttctaaataa tgtactacaa aatcaccgcg gaaagcttca ttttgtggtg
     3841 cgtaaagata gagggttaca aatggatttt cttcctctgc cgattgggtt tcttgaggtt
     3901 cgatagctac tgcttgaggt gtttcttcca ccactgtgtt caccattggg tttgcaaaat
     3961 ccggcgtatt gtattggata tgttgctgat tagaaatttt ctgaccgtaa gtgctaaccg
     4021 ttggttctgc taccgattgt atcggctgaa tttgctcagg ctgttgctga ggatttccgc
     4081 ccggcaaact gattttgata ttttgcagcg agctttcaac ttcctgttgt atctgttgcg
     4141 gattttcttc cggcacagac attgcttgat aatcctcatt ttgtggctgt aatgaggttg
     4201 ggatgctatt gctcatttta ttattctgtg gtggcacagc aataggtctg gtcgagaatg
     4261 tatttgaaaa aatatttgat ttttcacgac gagcggacca aaggctaaat ccaattagta
     4321 cagcaatcag tagcccggca agaataaaaa aaataatatg cagttccatt gtgtcctc
//
LOCUS       DANLTI010000164         4372 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.166, whole genome shotgun sequence.
ACCESSION   DANLTI010000164 DANLTI010000000
VERSION     DANLTI010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4372
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.166"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            54..1262
                     /locus_tag="PXB09_002473"
     CDS             54..1262
                     /locus_tag="PXB09_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDL5234530.1"
                     /translation="MSKNLILILNCGSSSLKFAILDPKTGDEKLSGLAEAFHLEDARI
                     KWKLNGEKGNADLGAGAAHSEALTFIAEKLLSDELKAGIGAIGHRIVHGGEKFTSSVV
                     ITDEVIKGIEDATQFAPLHNPAHLIGIKEAFRIFPELKDKNVAVFDTAFHQTMPEHAF
                     LYALPYTFYKENGIRRYGFHGTSHFYITSQVAELAGKSVEQTNAIICHLGNGGSVSVV
                     RNGKCIDTSMGLTPLEGLVMGTRSGDLDPAIISFLYNNLGMSMDEIDTTLVKKSGLLG
                     LTGVTSDCRYAEDNYNDVSKPEAKRALDVYSYRLAKYIGSYMAILGDDHLDAIAFTGG
                     IGENSGLVRELTLNHLKLFGIKLDQERNLAARFGKDGVITADESTFKAVVIPTNEELV
                     IAQDTAKLAL"
     gene            1315..3450
                     /gene="pta"
                     /locus_tag="PXB09_002474"
     CDS             1315..3450
                     /gene="pta"
                     /locus_tag="PXB09_002474"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005542370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDL5234531.1"
                     /translation="MSRTIILIPISTGVGLTSVSLGLVHALEQKGSKVGFLKPISQPI
                     SGEDTLDRSTTIIRAEQTTEVGEPFMLSEAETLIGQNQTDVLLEKVVERHQKLSKNNE
                     IVIVEGLIPTRKNSYANSINYEMAQALDAEIVLVAAPASDTPAQLKERVEAAASQFGG
                     RNNPNLLGVIINKFNAPVDDSGRTRPDLTEIFDSFQHSNNNVSEVEHLFAKSPIKLLG
                     CISWKAELIATRAIDVAKHLGASIINEGEIKARRIRGVTFCARNLPNMVDHFKAGSLL
                     VTSADRPEVLVAASLAVMNGIEIGAILLTGGYKIDSSIAKLCQQAFETGVPVFRIEGN
                     TWQTALSLQSFSLEVPVDDKERIAAIKEYMASKFNVGFIDEVSKAATRARRLSPAAFR
                     YQLTEYARQAKKRIVLPEGDEPRTVKAAALCAERGIAECVLLANPTDVQRVAEAQGVV
                     LGKGVTIIDPASIRENYVDRLVELRKAKGMTEVVAREQLLDTVVLGTMMLEANEVDGL
                     VSGAVHTTANTIRPPMQIIKTAPGSSIVSSIFFMLLPDQVLVYGDCAVNPDPTAEQLA
                     EIAIQSAESAKAFGIDPRVAMISYSTGTSGSGADVEKVKEATRIAQEKRPDLIIDGPL
                     QYDAAIMEDVARSKAPNSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQATQ"
     gene            3564..4244
                     /gene="can"
                     /locus_tag="PXB09_002475"
     CDS             3564..4244
                     /gene="can"
                     /locus_tag="PXB09_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDL5234532.1"
                     /translation="MEKIERLFANNHAWATKMKDEQSDYFKELAEHQKPTYLWIGCSD
                     SRVPAEKLTGLGPGELFVHRNVANMVIHTDLNCLSVVQYAVDVLEIEHIIICGHTNCG
                     GINAAIAQKELGLINNWLLHIRDIWFKHSHLLGKLPYEERSNVLTRLNVAEQVYNLGQ
                     SSIIKTAWEQGKSLSLHGWVYDVTDGFLIDQGVMATSRETLEITYRNAIAKITTEANE
                     KIVLNDEN"
BASE COUNT         1371 a          803 c          882 g         1316 t
ORIGIN      
        1 aataaaaata gtattttctt caaactcatt tcataaaata aggtaatttg accatgtcta
       61 aaaacttaat cttaatcctt aactgcggta gttcatctct taaatttgct attttagatc
      121 ctaaaacagg tgatgaaaaa ttatctggac ttgctgaagc ttttcattta gaagatgcac
      181 gtatcaagtg gaagttaaac ggggagaaag gtaatgctga tttaggtgca ggtgccgcac
      241 atagtgaagc acttaccttt attgctgaaa aattgttatc tgacgaatta aaagcaggta
      301 tcggcgcgat tggtcatcgt attgttcatg gcggtgaaaa attcacctca tcagttgtaa
      361 ttaccgatga agtgattaaa ggtattgaag atgcaacgca atttgcacca ttacacaacc
      421 ctgcgcattt aattggtatt aaagaagcat tccgcatttt ccctgaatta aaagacaaaa
      481 acgtagctgt atttgacact gcattccatc agacaatgcc ggaacacgca ttcttatatg
      541 cacttccata tacattctat aaagaaaatg gtattcgtcg ctacggtttc catggcacaa
      601 gccacttcta tatcacctca caagttgcag aattagcagg taagtctgtt gagcaaacca
      661 atgccattat ttgccactta ggtaacggtg gttctgtttc tgttgtacgc aatggtaaat
      721 gtattgatac ctcaatgggt ttaactccat tagaaggttt agtaatgggt actcgctctg
      781 gtgacttaga ccctgcgatt atctctttct tatacaataa cttaggtatg tcaatggacg
      841 aaattgatac tactctagta aaaaaatctg gtcttttagg tttaactggc gtaactagtg
      901 actgtcgtta tgcggaagat aattacaatg acgtatcaaa accggaagca aaacgtgctt
      961 tagatgtata tagctatcgt ttagctaaat atattggttc atatatggca attttaggcg
     1021 atgaccactt agatgctatc gcatttacag gtggtatcgg tgaaaattca ggcttagtac
     1081 gtgaattaac cttaaatcac ttaaaattat ttggcattaa gttagatcaa gagcgtaacc
     1141 ttgctgcccg ttttggtaaa gatggagtca ttacagcgga cgagtcaaca tttaaagctg
     1201 ttgttatccc aactaatgaa gaactcgtga ttgcacaaga taccgctaaa ttagcattat
     1261 aatcataggg ggcagatatt ctgccctttc actttctttt aatttggaaa tattatgtct
     1321 agaacgatca ttcttatccc tatttcaact ggtgttggtt taaccagtgt tagcttaggt
     1381 ttagtacatg ctttggagca aaaaggttct aaagtaggat ttttaaaacc gatttctcaa
     1441 cctatcagcg gtgaagatac gttagaccgc tcaacaacga ttatcagagc agaacaaaca
     1501 acagaggttg gtgagccgtt tatgttaagc gaagctgaaa cattaatcgg tcaaaaccaa
     1561 acggatgtat tgttagaaaa agtggtggaa cgccaccaaa aattatcaaa aaataatgaa
     1621 attgtcattg ttgaaggttt aattccaacg cgtaaaaact catacgctaa cagcattaac
     1681 tatgaaatgg ctcaagccct tgatgctgaa attgtattag ttgcagcacc ggcctcagat
     1741 acaccagctc aattaaaaga gcgagttgaa gctgccgctt cacaatttgg tggacgtaac
     1801 aacccaaatt tactgggcgt tattatcaat aaattcaatg caccagtaga tgattcaggt
     1861 agaacccgtc cagatttgac tgaaattttt gattcatttc aacactcaaa taataatgtt
     1921 tcagaagtcg agcatctttt tgctaaaagt ccaattaagc tgttaggctg tattagctgg
     1981 aaagcagaac ttattgctac acgagcaatt gatgttgcaa aacatttagg cgcttcaatt
     2041 attaatgaag gcgaaataaa ggctcgtcgg attcgcggtg tgacattctg tgcacgtaac
     2101 ttaccaaata tggtcgatca ttttaaagcc ggtagtttat tagttacctc tgcggatcgt
     2161 cctgaagtgt tagttgctgc atcgttggcg gtaatgaatg gcatcgaaat tggtgctatt
     2221 ttactaaccg gtggttataa aattgatagc tcaattgcaa aactttgcca acaagcattt
     2281 gaaaccggtg tgcctgtatt ccgtattgaa ggtaacactt ggcaaaccgc attaagccta
     2341 caaagcttca gcttagaagt gcctgtagat gataaagagc gtattgctgc aattaaagaa
     2401 tatatggcaa gcaaatttaa tgtaggtttc attgatgagg tttctaaagc cgctactcgt
     2461 gcaagacgtt tatcacctgc agcattccgt taccaattaa ccgaatatgc ccgtcaagcg
     2521 aaaaaacgca ttgttttacc tgaaggagat gagcctcgta ctgtgaaagc ggctgcatta
     2581 tgtgctgagc gtggcattgc agaatgtgtg ttattagcta acccaacaga cgtacaacgt
     2641 gttgctgaag cacaaggcgt ggtattaggt aaaggcgtaa cgattattga ccctgcgagc
     2701 attcgtgaaa attatgttga tcgcttagtt gaattgcgta aagcaaaagg aatgactgaa
     2761 gttgttgctc gtgagcaact tttagataca gttgtattgg gtacaatgat gcttgaagct
     2821 aatgaagtgg acggtttagt ctcaggcgca gttcacacaa ccgctaacac tattcgccca
     2881 ccaatgcaga tcattaaaac tgcaccggga agctctattg tatcttctat cttctttatg
     2941 ctactacctg atcaagtatt ggtatatggt gactgtgcgg taaaccctga cccaactgca
     3001 gaacagctag cggaaattgc gattcaatca gcagaatctg ccaaagcctt tggtattgac
     3061 cctcgtgttg caatgatctc ctactctacc ggtacatcag gttcaggtgc ggatgtagaa
     3121 aaagtgaaag aagcaactcg tattgcccaa gaaaaacgtc cagatttaat cattgatggc
     3181 ccattacaat atgatgcggc gattatggaa gatgttgccc gctcaaaagc accaaattca
     3241 cctgtagcag gtaaagcaac tgtatttgtc ttcccggatt taaatactgg taataccacc
     3301 tataaagcgg tacaacgttc ggcagattta gtctctatcg gcccaatgtt acaaggtatg
     3361 cgtaaacctg taaatgactt gtcccgtggg gctttagttg acgacatcgt ttatactatt
     3421 gcgttaactg cgattcaagc aacgcaataa ttccctccca aatgaaacca aatgccctta
     3481 aaactaaggg catttttatt ttttacctac ccgacttttc aatttaatca tataatcaag
     3541 attagtgtta aaaaggagaa tttatggaaa aaattgaacg cttatttgcc aataaccacg
     3601 cctgggcaac taagatgaaa gatgaacaat cggattattt taaagaatta gcggaacatc
     3661 aaaagccaac ctatttatgg attggctgtt ccgatagtcg tgtgcctgct gaaaaactca
     3721 cagggttagg ccccggagaa ttatttgttc atcgaaatgt agcaaatatg gtgattcaca
     3781 ctgatcttaa ttgtctgtcg gttgttcaat atgcggtaga tgtattagaa attgagcata
     3841 ttattatctg tggtcacact aattgtggtg gtatcaatgc ggcaattgca caaaaagaac
     3901 ttggtttaat taataactgg ttgttacata ttcgtgatat ctggtttaaa cacagccatt
     3961 tactaggcaa acttccctat gaagagcgat caaatgtctt gacccgatta aatgttgcag
     4021 aacaagttta taatttaggt cagtcctcta ttattaaaac cgcttgggaa cagggtaaat
     4081 ccctctcgct acacggttgg gtatacgatg ttacagatgg tttcttgatt gaccaaggtg
     4141 ttatggctac tagccgagaa acattagaaa ttacctatcg taatgcaata gctaaaataa
     4201 caaccgaagc aaacgaaaaa atagttttaa acgatgaaaa ttagccattg taagcggtta
     4261 aatttatcga tttttttaca atctttttat aaaaaaccat tgtttgatgg ttttttattt
     4321 tcctgattcc tgttatcgtc aaaaaagttt taaatttcag caaaagtgta aa
//
LOCUS       DANLTI010000165         4283 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.167, whole genome shotgun sequence.
ACCESSION   DANLTI010000165 DANLTI010000000
VERSION     DANLTI010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.167"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(117..827)
                     /locus_tag="PXB09_002476"
     CDS             complement(117..827)
                     /locus_tag="PXB09_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234533.1"
                     /translation="MWKKIRIDFTDTVKCQFCSRMITSGKAIVVQNELGNISFSGPSC
                     AQNKNGQNVVNPKEKIVDITKGCLLHEPTTNDKTDKQVDVEQDNFTSIHDDEVHNYLD
                     NNAVNAYLTLRFEKLSHLTSIIKSQKLNEIYHNYELTGQISQKDESYIRVIMYGEAYP
                     LYTYQNLQAVYAAEYWLQSFIQHNPENDLNFIQDTLNQLRRKLTLTEKQIMGINNWFK
                     NSDGKMVKLKTNAFVRGK"
     gene            1304..1822
                     /locus_tag="PXB09_002477"
     CDS             1304..1822
                     /locus_tag="PXB09_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5234534.1"
                     /translation="MRYIKYSLFLVSTMLISGCAELSAINDKVGDWAGQMNQTLYGSK
                     DGSVEQHNGRQVYTKTRNGKYVYQDSGTLQLKRNIDDVFLKVRREFGFRPTNADSDSR
                     KVYHTVQGTFYHVSGYFESDVDTDGVHLGENYLEVIIEKGSKNQVNVEWKATGSARWL
                     DSAKQRLLNTLK"
     gene            1982..4033
                     /locus_tag="PXB09_002478"
     CDS             1982..4033
                     /locus_tag="PXB09_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5234535.1"
                     /translation="MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGH
                     LVEQYQPEDYDEAWKRWAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIAT
                     DADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
                     RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSH
                     YALAVQLTTTSGETFVAGLAVPEQYLDESGLCLDSRVIQQAEAQIKQTGLAKVVTVET
                     KREKKSPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPES
                     QFSDVPNVIRSLVASDSGLQTLLPKLNLRQKSRAWDDKKITAHHGIIPTIKKADLSKL
                     SEEEMKVYDLIRRRYLAQFLPHLEMDKTVATLQSSGHTLVARGNVIVAQGWRILFGKN
                     VDEETGNDDEKQGLPVLTKNQQCNVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVT
                     DPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLLKKKKSLVASAEAVALIDSLPDLLK
                     NPGLTALWEQALNQIAEGSMTLDAFMQKQEAFVKQLIGSCMQQGMSLGNIEIRKCSEC
                     GKPMRKINHAKGTFWGCTGYPDCQHKEADKKVKSASNKSAKKSSNLNVLDQLNKLRSQ
                     L"
     gene            complement(4094..4231)
                     /locus_tag="PXB09_002479"
     CDS             complement(4094..4231)
                     /locus_tag="PXB09_002479"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234536.1"
                     /translation="MTLQSRFRQLQQTNVAGIIHLMFSWHSHKVEFPLRMLGDILAGV
                     D"
BASE COUNT         1345 a          815 c          845 g         1278 t
ORIGIN      
        1 ttacatataa cttgaatttg tcaaaataag caagcaaata ataggaaaga gtcttttaaa
       61 accagtctta cgtcgggcct acgtaacaaa ataagtggcc accacaatta tgttaactat
      121 ttccctctta caaaagcatt tgtctttaat ttcaccattt ttccatcaga attcttaaac
      181 caattattta tgcccataat ctgtttttca gttaatgtta gctttcttct gagctgattt
      241 aatgtgtctt gtataaaatt taagtcattc tctggattat gctgaataaa tgattgaagc
      301 caatattcag cagcataaac agcttgtaag ttttggtatg tatacaaagg atatgcctca
      361 ccatacataa tcactcttat gtaactttca tctttttgag atatttgccc tgtaagttca
      421 tagttatgat agatttcatt taacttttga gattttataa tcgaggttaa atgcgatagt
      481 ttttcaaatc ttaaggtcag gtatgcatta acagcattat tgtccaaata attatgtact
      541 tcgtcatcgt gtatggatgt gaaattatct tgctcaacat ctacttgctt atccgtttta
      601 tcatttgttg ttggctcatg aagtaaacat ccctttgtga tatcaactat tttctcttta
      661 ggattgacta cattctgacc gttcttattt tgagcacaag acggtcctga aaaagagata
      721 ttgccaagtt cattttgaac aacaatagct ttgcctgatg taatcattct actgcaaaat
      781 tgacatttca ctgtatcagt aaaatcaatc ctaatttttt tccacataac atatctctcc
      841 atatagtgag taataaaaat acttcttaac tctcttcatt gatgaaataa ttgcaaaaat
      901 aactttgata gaggataaat atatgaattt ccctccaact cgatggaaaa tattacacca
      961 gtatcaaact gagctagagc tctgggttga acaagccaca gaagagcata tcaagcaata
     1021 cttgactgaa attcacggat gtgtataccc agatgactgg gaaaatgtgc gtatatccca
     1081 tatgtcatct caaactcata ttttccatag ctgtgaacgt tgcctagaac ttatctctgc
     1141 gatattaaca atctcacaac taagcagacc cgatctaaat ggtctactgt gtgacagaaa
     1201 gctataatat tttttctctt tgtaagtaaa agagttttaa gtagatttta accgcacttt
     1261 tgcaaaaaat gaacgcagat aacccgcttg taaggagaat tctatgcgtt acatcaaata
     1321 tagtttattt cttgtttcta caatgctaat ttcaggctgt gctgaactct cagcaattaa
     1381 cgataaggtt ggggattggg ccgggcaaat gaatcagacg ctctatggct ctaaagacgg
     1441 ctctgttgaa cagcataatg ggcgacaagt ttatactaaa acccgaaatg gtaagtacgt
     1501 ttatcaagat tccggcacat tgcagttgaa gcggaatatt gatgatgtat tcctgaaagt
     1561 tcgtcgggaa tttggcttcc gcccaacgaa tgctgatagt gactcccgta aagtttatca
     1621 tacggtacaa ggtacttttt accatgtttc cggctatttt gaatctgatg tagatactga
     1681 tggggtacac ttaggtgaaa actacttgga agttatcatt gaaaaaggca gtaaaaatca
     1741 ggtgaatgtt gaatggaaag caactggtag tgctagatgg ctcgatagtg caaaacagcg
     1801 tttacttaat acattaaaat aataactcat attgctccta gaacctcttc ccagtggaaa
     1861 cactgggatt ttttatgtcc ttatttctca aattattaca tcctacgaga caataagtcg
     1921 ttgaatgcta tttaatcagc acattactat ttgcctatct gtattcattt taggaaataa
     1981 tatgaaatta tttatttgtg aaaagccatc tcaagctcga gatcttgccg gcgtattggg
     2041 tgctacttca aaaggtgaag gcttgctggc gactgcggat aaatctatta ttgtcacttg
     2101 ggggttcggg catctcgttg agcaatatca gccggaagat tatgatgaag cgtggaaacg
     2161 ctgggcattt gaaacattac ccattattcc tgctcagtgg aaaatgacac cgaaaaaaga
     2221 gtctaagaag caatattctg ttgtaatagg gcttatcaaa aaagcaacct ccgtggtcat
     2281 tgcgaccgat gctgatcgag aaggtgagat gattgctcgt gagctgttag atttagctgg
     2341 ataccgaggt caaatccaac gttgctggct atcagctctg gatgatgcca gtattcgaaa
     2401 ggctcttcaa acactcaaat caggtaaaga aaccgaggct ctttactacg ccggtatggg
     2461 acgtagccgc tcggactggt tgattggaat gaacttctcc cgtttattta ccttaatggc
     2521 tcaagcaaaa ggctattccg gtaagccatt gagcgttggt cgagtacaaa gtccaacatt
     2581 aactcttgtg gttaatcgag atagagaaat tgctaatttc gtgcctaaat ctcattatgc
     2641 gttagcggtt cagctgacaa caacctctgg tgaaactttc gttgccgggc ttgcagtacc
     2701 tgaacagtat ttggatgagt ccggactttg ccttgatagt cgtgtcatac aacaagccga
     2761 agctcaaatt aaacaaacag gcttagccaa agtggtgacg gttgaaacta aacgagagaa
     2821 aaaatctcca ccgttactct acgcattaag tgatttacaa ggcgaatgta accgcttgtt
     2881 tggctttggg gctcagcagg tgttggatat cgcacaatcc ctttacgaag agcataaaat
     2941 cacgacttat ccccgtacag actgtggtta tctgccagaa tcacaatttt ctgatgttcc
     3001 taacgtaatc cgctcattag ttgcctctga ttcagggcta caaactctct tgcctaaatt
     3061 aaatttgcga caaaaaagtc gggcgtggga cgataaaaaa attaccgctc accacggtat
     3121 tatcccaacc attaaaaaag ctgatttaag taaattgagt gaggaggaaa tgaaggtcta
     3181 tgatctcatt cgccgccgat atcttgctca attcttaccg cacttggaaa tggataaaac
     3241 cgttgccact ctgcaatcta gtgggcacac tctggttgct cggggaaatg tcatcgttgc
     3301 tcaaggctgg cgtatcttgt ttggcaaaaa tgtggatgag gaaactggta atgatgatga
     3361 gaaacaagga ttacctgtat tgactaaaaa tcagcaatgc aatgtcactc attctgaagt
     3421 ccgaacattg caaactaaac ctcccgcaca ctatacagag gggacattac tcgatgcaat
     3481 gaaaaatgcc gctcgctttg tgactgaccc aagactcaaa caacgcttac gtgaaacgga
     3541 aggtttaggc acagaagcaa cccgtgccgg attaattcaa ggcctaattg acaaaggatt
     3601 tctccttaag aagaaaaaat cactggttgc ctcagcagaa gccgttgcct taattgatag
     3661 tttgccggac ttactgaaaa atcccggttt aacggcatta tgggaacaag ccctcaatca
     3721 gattgccgaa ggtagtatga cacttgatgc atttatgcaa aagcaagaag catttgtaaa
     3781 acaacttatc ggcagttgta tgcaacaggg aatgtcactt gggaatattg aaatccgaaa
     3841 atgttcagaa tgtggtaagc caatgagaaa aatcaatcac gctaagggaa cattctgggg
     3901 atgtactggt tatccagatt gccaacataa agaggctgat aaaaaggtaa aatcagcttc
     3961 aaataaatct gctaagaaaa gtagtaattt aaatgtactc gatcaactga ataaattaag
     4021 aagccagtta taaattcaag tagattatgg tattatcaag gaacaaagaa cccgttttgt
     4081 agattgtcgg ttatcaatct acaccagcca aaatgtctcc cagcattctg agagggaact
     4141 ccactttgtg ggaatgccaa ctaaacatta aatggataat gccagccaca ttagtctgtt
     4201 gtaattgtct aaatcgtgat tgcaacgtca taatattacc cgattggggg gattatgacg
     4261 ttgcaattac tgctaactat tct
//
LOCUS       DANLTI010000166         4280 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.168, whole genome shotgun sequence.
ACCESSION   DANLTI010000166 DANLTI010000000
VERSION     DANLTI010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.168"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(7..1413)
                     /locus_tag="PXB09_002480"
     CDS             complement(7..1413)
                     /locus_tag="PXB09_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDL5234537.1"
                     /translation="MKLTKIVLSVVAVIGAVAVGGSWYTGKQVEEKYQELVVQANNQL
                     KQLSGEFGANIELKDVQIDRHFFISNAKYRLEVDLGNGKKLDFVGNDKLHHGPLPLNR
                     LAKLNLAPVMMSAESKLQAPEALKKLMGEHIGTGFSNISYSGDVEGHFDISPIKHSDE
                     TGHIETTPIKVQYSYDQKLKGVDSTVELESLKIKAEEFDFQIQGIVYDVQTENNESYP
                     NLTLGKGSGKINAIEFKSKDGKLSQIKDVVVKGDNLLKGDRLISTGDLEAATFNIEGV
                     EMGKLKMDMAYDLDAKLTNDITPLLSNPQTLENEKTGELLLQLLAKSFKFHINNFSLE
                     NSKGKVDLALLLNMAQFDPQNLGNMQAVLQALSTSKFTSNINRQYAEDIIRQVSIVTE
                     KLGEEEAKAFAKQQVDAVFLNAGVEQYGLRKVDDNNVKIELTIDNGKVNLNGRELTED
                     ELQMALFMIVMGAGSLGQ"
     gene            complement(1463..2269)
                     /gene="trpA"
                     /locus_tag="PXB09_002481"
     CDS             complement(1463..2269)
                     /gene="trpA"
                     /locus_tag="PXB09_002481"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDL5234538.1"
                     /translation="MSRFDTLFTALKAKNEGAFVPFVTLCDPGFERSFEIIDTMIKNG
                     ADALELGFPFSDPLLDGPVIQAANKRALDGGYSTDSCFELIAKIRAKYPDIPIGLLLC
                     ANLIFVPTAEVFFQRCQQSGVDAVLIADLPVFAAQEFVPTAEKYGIQPVFICPPNADQ
                     NTIERIAQLTQGYTYLVSRAGVTSAENQAHASNLDNLVESLKQAGAAPILQGFGIAKP
                     EQVKEALRLGADGAISGSAIVKIIERNLADQANLLKELAEFVQVMKAATK"
     gene            complement(2271..3461)
                     /gene="trpB"
                     /locus_tag="PXB09_002482"
     CDS             complement(2271..3461)
                     /gene="trpB"
                     /locus_tag="PXB09_002482"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDL5234539.1"
                     /translation="MSDTLLNPYFGEFGGMYVPEILVPVLKELEQAFVDAQQDPTFQA
                     EFADLLKNYAGRPTALTLCRNLTKGSKTKLYLKREDLLHGGAHKTNQVLGQILLAKRM
                     GKTRIIAETGAGQHGVATALACAMLGMPCVVYMGAKDVERQSPNVFRMRLMGAEVIPV
                     QKGSCSLKDACCEAMRDWAANYDTTHYLIGTAAGPHPFPTMVREFQKMIGEEIKRQIL
                     AKEDRLPDAVIAAVGGGSNAIGMFADFIEEQSVKLIGVEPAGKGIETGEHGAPLKHGT
                     TGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNATGRAEYVSITDAEAL
                     EAFQALAKNEGIIPALESSHALAYALKMIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL
                     NGGE"
     gene            complement(3473..4225)
                     /locus_tag="PXB09_002483"
     CDS             complement(3473..4225)
                     /locus_tag="PXB09_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5234540.1"
                     /translation="MKIALVTGVTAGFGLAICKLLLQSGYKVIGTGRRAERLEELHLQ
                     FGDKFLPLAFDIQQPDEVEKALNSRPKAWQQIDLLVNNAGLALGLEPAQKADLNDWYQ
                     MIDTNIKGLVTMTRLVLPEMVERKSGHIINIGSIAGTYPYPGGNVYGGTKAFVKQFSL
                     NLRADLAGTKVRVSNVEPGLCGGTEFSNVRFKGDDEKAAKVYENVQFVRPEDVANIVL
                     WLNQQPEHVNINRVEVMPVAQTSSALNVARNI"
BASE COUNT         1188 a          992 c          757 g         1343 t
ORIGIN      
        1 ttatgattat tgcccgagtg agcctgctcc catcacaatc ataaacagag ccatttgaag
       61 ttcatcttcg gtcagttcac gtccgtttaa attcactttt ccgttatcta tagttaattc
      121 aatcttcaca ttgttgtcat ctacttttct taatccgtac tgttcaactc ccgcattgag
      181 aaaaacagca tcaacttgtt gcttggcaaa tgctttcgcc tcttcttcgc ctaatttttc
      241 tgtaactatt gagacttggc gaataatatc ttccgcatat tgacggttga tatttgaagt
      301 gaatttactt gttgaaaggg cttgcaatac cgcttgcata ttaccaagat tttgtgggtc
      361 aaattgagcc atattcagta ataaagccaa atcaactttg cctttgctgt tttcaagtga
      421 gaaattatta atatggaatt taaatgattt tgctaatagt tgtaataata actcgcctgt
      481 tttttcattt tctaatgttt gaggattaga taataaaggc gtaatatcat tggttaattt
      541 agcatctaaa tcgtatgcca tatccatttt taatttaccc atttcaacac cctcaatgtt
      601 gaaagtggct gcctctaaat ctccggtaga aattaaacga tcgcctttta atagattatc
      661 gcccttcacc acaacatctt taatttgaga taatttgcca tctttagact taaactcaat
      721 agcgttaatt tttccactac ctttgcctaa agttaaatta ggataacttt cattattttc
      781 tgtttgaaca tcataaacta taccttgaat ttgaaaatca aattcttctg cttttatctt
      841 aagactttct agctcaacag tgctatcaac cccttttaat ttttggtcgt agctatattg
      901 cactttgatt ggcgtggttt caatatgacc tgtttcatca ctatgtttaa tcggggaaat
      961 atcaaaatgc ccttccacat cgcccgaata gctgatatta gaaaaaccgg tgccaatatg
     1021 ttcacccatc aattttttaa gggcttcagg agcttgtaat ttgctttccg cactcatcat
     1081 tacaggagct aaattaagtt tcgctaaacg attaagcggt agcggaccgt gatgaagttt
     1141 atcattacca acaaagtcca atttcttacc attacccaaa tccacttcta aacgatattt
     1201 cgcattagag ataaagaaat ggcgatcgat ctgcacatct ttaagctcaa tattcgcacc
     1261 aaattcgcca ctcagttgtt taagttggtt attagcttga acaaccaatt cttgatattt
     1321 ttcttcaacc tgcttacctg tgtaccaact tccgccaact gcaacagcac caattaccgc
     1381 tacaactgaa agaacaattt ttgttaattt cattctgttt ccttttattt tcaaaaaaat
     1441 ttaaaaaatg accgcttgta gtttacttcg tagccgcttt catcacttgt acaaattcgg
     1501 caagttcttt gagcaaatta gcttggtcag ctaaattacg ttcaataatt ttcacaatcg
     1561 ctgagcctga aatcgccccg tctgccccaa gccttaacgc ctcttttacc tgttcaggtt
     1621 tggctatgcc aaaaccttgt aagatagggg cagctccggc ttgttttaaa ctttccacta
     1681 aattatccaa attacttgcg tgagcttggt tttcagcact agttacaccg gcacgggaaa
     1741 ctaaataagt gtagccttgg gttaattgag caatccgttc aatggtgttt tgatcagcat
     1801 tcggcgggca aataaacacc ggctgaattc catatttttc agcggttggc acaaactctt
     1861 gagcagcgaa aacaggcaaa tcagcaatca acaccgcatc aactccactt tgttggcaac
     1921 gttggaaaaa tacttctgcg gttggcacaa aaattaaatt ggcacacagt agtaaaccga
     1981 taggaatgtc tggatattta gctcgaattt tggcaatcag ctcaaaacag ctatcagtgc
     2041 tatagccacc atctaaagct cgtttattcg ctgcttgaat caccggcccg tctaagaggg
     2101 ggtcagaaaa cggaaagcct agctctaaag catcagcccc gtttttaatc atcgtgtcga
     2161 taatctcaaa actgcgttca aaaccaggat cgcataatgt cacaaacggc acaaaagccc
     2221 cttcgttttt tgcttttaat gcagtaaata gcgtatcaaa gcggctcatt ttactctcct
     2281 ccatttaaaa ttttatccac ggtgaaaatg tctttatcgc ctcgacccga taaattcacc
     2341 actaataact gctctttttc agggttctgc ttaatcattt ttaacgcata ggctaaggcg
     2401 tgggaagatt ctaacgccgg aataatcccc tcatttttgg ctaatgcttg gaatgcctct
     2461 aaagcctctg catcggtaat cgatacatat tcagctcgcc ctgtcgcatt taaataagcg
     2521 tgttgcggcc cgacagaagg gaaatctaag ccggctgaaa tggagtaaga ctcttcaatt
     2581 tgcccgtctt tatcctgcat aatcggcgat ttcataccga aatagatccc cgttgtgccg
     2641 tgtttgagcg gtgcaccgtg ttcaccggtt tcaattcctt ttcctgccgg ctcaacaccg
     2701 atcaatttga cggattgctc ttcgataaaa tctgcaaaca taccgatagc atttgagcca
     2761 ccgcctacgg cagcaatcac cgcatcaggc aagcggtctt cttttgctaa aatttgacgt
     2821 ttgatctctt cgccaatcat tttctgaaat tcacgcacca ttgtcgggaa cgggtgcggg
     2881 ccggctgcag tgccgattag gtaatgggta gtatcataat ttgccgccca atcccgcatt
     2941 gcctcgcaac aggcatcttt gagcgagcaa gagccttttt gtaccggaat cacctccgct
     3001 cccattaaac gcatacggaa tacatttggc gattggcgtt ctacatcttt tgcgcccata
     3061 tacaccacgc aaggcattcc taacatcgca cacgctaatg cggttgccac accgtgctgt
     3121 cctgctcctg tttcggcaat aatgcgggtt ttacccattc gtttagcgag taagatttgc
     3181 cctagcactt ggttggtttt atgtgcccca ccgtgtaaaa gatcttcacg ttttaaatag
     3241 agtttggttt tactgccttt ggttaaatta cgacaaaggg ttaaagcagt cgggcgaccg
     3301 gcatagtttt tgagtaaatc ggcaaattca gcttggaatg ttgggtcttg ctgagcatct
     3361 acaaaggctt gttctaattc ttttagcacc ggcactaaaa tttccggcac atacatacca
     3421 ccaaattcac caaaataagg attaagaagt gtgtctgaca taatatttcc ttttaaatat
     3481 ttctcgctac atttaaggca gaagaagttt gagccaccgg catcacttca acccgattaa
     3541 tattaacgtg ttcaggttgc tgattcagcc aaagcacaat atttgccaca tcttccgggc
     3601 gcacaaactg cacgttttca taaactttag ccgctttttc atcatcgcct ttaaagcgta
     3661 catttgaaaa ttccgtaccg ccacatagcc ccggctcaac attggaaaca cgcactttag
     3721 tgccggctaa atctgcccgc aaatttaggc taaactgttt cacgaaggct ttagtaccac
     3781 catatacatt accgcccggg taagggtaag tgccggcaat cgagccgata ttaataatat
     3841 gcccactttt ccgctccacc atttcaggca aaactaagcg tgtcatcgtt accaatcctt
     3901 taatattggt atcgatcatt tgataccaat cgttcaaatc tgctttctgt gccggttcta
     3961 agccgagtgc aaggcctgca ttgtttacta ataaatcaat ttgttgccac gctttagggc
     4021 ggctattcag tgctttttcc acctcatcgg gctgttgaat atcaaatgca agcggtagaa
     4081 atttatcgcc aaattgtaaa tgcagttctt ctaaacgctc tgcccgtctg cccgtgccaa
     4141 ttactttata acccgattga agcaataatt tacaaattgc caacccaaat ccagcagtta
     4201 ctcctgtgac taatgctatt ttcatctttt caccctcaaa tttaaaatgt actattaaag
     4261 tagtacaaaa aaattaaaat
//
LOCUS       DANLTI010000167         4257 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.169, whole genome shotgun sequence.
ACCESSION   DANLTI010000167 DANLTI010000000
VERSION     DANLTI010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4257
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.169"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(47..122)
                     /locus_tag="PXB09_002484"
     tRNA            complement(47..122)
                     /locus_tag="PXB09_002484"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Asn,seq:gtt)
     gene            complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXB09_002485"
     CDS             complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXB09_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDL5234541.1"
                     /translation="MELTDHEMLRYNRQIILKSVDFDGQEKLKASRVLIVGLGGLGCA
                     ASQYLASAGVGHLTLVDFDLVSLSNLQRQILHTDATIGQPKVESAKARLAAINPNIQI
                     ETINQRCSDEQLAKLIANVDLVLDCTDNVTVRNQLNLQCFKQKRPLVSGSAIRFEGQV
                     SVFCYQEQEPCYECLSRLFGDATLSCVEAGVIAPIVGIIGSIQALEAIKVLLNIGRTL
                     SGKLLMIDGLHFSVREMALPKQNNCPVCTSY"
     gene            complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXB09_002486"
     CDS             complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXB09_002486"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDL5234542.1"
                     /translation="MALLALSDALDNMLARLSTPKLVEQLPLNECANRVLAEDIFSPI
                     NVPNFDNSAMDGYAVRISDLAQNLTLNVAGKAFAGNPFNGEIKAGECVRIMTGALVPK
                     GVDAVVMQEETTLNSDGSVTFNHIPKLGSNIRRIGEDVKQGALVLKKGSLLNVASLPL
                     LASLGIASVPVFVKLKVAILSTGDELTSVGEPLSEGKIYDTNRFAVRLMLEKLNCEIL
                     DFGILPDDPILFEQTFRQAQQQADVLITSGGVSVGEADFTKDVLEKLGEIGFWKIAMK
                     PGKPFAFGKLEQAWFFGLPGNPVSALVTFYQLAQPALAKLSGLSTDKIAKLTQNLTAC
                     SAGKLKKAVGRQDFQRGYYYANEKGELEVRAVGTQGSHIFSAFNESNCFIVLEAERGN
                     VDAGEKVTIQPFNSLMY"
     gene            complement(2337..2954)
                     /locus_tag="PXB09_002487"
     CDS             complement(2337..2954)
                     /locus_tag="PXB09_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006719828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDL5234543.1"
                     /translation="MFDSLAVQFVVLWAVIDPIGSVPVYLAKTIGLPIEARRKIALNA
                     VLIAAGILIFFLIGGQVLLESMQIPLPAFQAAGGLVLLLFALTMIFGESKPEQEMRIS
                     SNLNELAVYPLAVPSIASPGAMMAIVLLTDNHRFHIGDQIITAGIMLLVLFITYLLLL
                     AANRIQHLIGNAGAAIISRVMGLILAAIAVNNLLIGVRDFFVQIS"
     gene            complement(3022..4233)
                     /locus_tag="PXB09_002488"
     CDS             complement(3022..4233)
                     /locus_tag="PXB09_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDL5234544.1"
                     /translation="MISRQMQSLLKRLVAQFPAVLVTGARQVGKSTLLQHIGEGYQYI
                     TFDDPMLLELAKQESRLFFLNHQGKLILDEVQYVPEIFALLKLEIDKKQQNGLFLLSG
                     SQAFELMQNVSETLAGRIAILKLQGLSLREILGVKFDQPFLPTTDYLLAREQELKSPE
                     NIWQLIHKGDMPRLYAQEVDWEIYYRSYVATYIERDVRQLTNIASTTDFTRFMVSIAS
                     RSGELLNYSNIAQEVGVSNETIKRWVAILQTSGIIYLLQPYHNNHLKRAIKTPKVYFL
                     DTGLMAYLTKWLTPETIAQGAKSWQFFETFVVSQIIKSFHNQGIEPPIYFYRDTNQKE
                     IDLIIEYDRTLYPIEIKVTASPTKKMAKSFDLLNSVSSEWKLGQGAIINQYPTKLYLS
                     ENLVALPVSYL"
BASE COUNT         1300 a          992 c          784 g         1181 t
ORIGIN      
        1 tataaaagga gacaaataaa acaagaacaa aagaaaaata aaatcttggc tcctcctgcg
       61 ggactcgaac ctgcgacata tggattaaca gtccaccgtt ctaccgactg aactaaggag
      121 gaattaacgg tgtaaataat aggctaaaac gttttagccg tcaaataaaa aaaataaact
      181 gtcgttcatt ttttacattt cttgacattt tttcgccaat aagtatgaga aaaatactta
      241 ataagaggta caaaccggac agttattttg cttaggtaat gccatttctc tgacagaaaa
      301 atgcaagccg tcaatcatta acaattttcc ggaaagagtt ctgccgatat taagtagcac
      361 tttaattgct tccaacgctt gaatactgcc tatgatgcca acaatcggag caatgacccc
      421 cgcttcaaca caacttaaag tcgcatcacc aaacaacctg cttaaacatt catagcacgg
      481 ttcttgttct tgataacaaa atacactcac ctgcccttca aatcgaattg ccgaaccgga
      541 aacaagcggt cgtttttgct taaaacattg caaatttaac tgattacgca cagtaacgtt
      601 atcggtacaa tccagcacta aatctacatt tgcaatcagc ttggctaact gctcatcgga
      661 acatcgctga ttgatagttt caatctgaat gttcggatta atcgccgcta atcgagcttt
      721 ggcagattcc acctttggct gcccgatagt cgcatcggta tgtaaaattt ggcgttgcag
      781 attagaaagt gagaccagat caaaatccac caaagtcaaa tgcccaacgc cggcagaagc
      841 taagtattgc gatgccgcac agcccaaacc acctaaaccg acaatcaaca ctcggctggc
      901 ttttaacttt tcctgcccgt caaaatccac gctttttagg ataatctggc gattataacg
      961 tagcatttcg tgatcggtaa gttccatttt tacacctaaa gagtaaacga tggcgcaagc
     1021 gtccacgctt gtgcctatat ttttattgct agcacaagcg tggacgcttg cgctatctta
     1081 attcattaat acatcagcga attaaacggc tgaatagtga ctttttcccc agcatcaaca
     1141 ttgcctcgtt ctgcttctag cacaataaaa cagttacttt cattaaaagc gctgaaaata
     1201 tgtgagcctt gcgtgccaac tgcacgaact tctaactcac ctttttcatt ggcatagtaa
     1261 tagccccgtt ggaaatcttg gcgaccgacc gcttttttca attttccggc actgcaagcg
     1321 gttagatttt gggttaattt tgcaatttta tctgtcgata aacccgaaag tttggctaac
     1381 gccggttgcg ctaattggta gaaagtcact aatgcagaga cagggttgcc cggcagccca
     1441 aaaaaccaag cctgttctaa tttaccgaat gcaaaaggct tgcccggctt catcgcaatt
     1501 ttccagaaac cgatttcgcc taatttttcc agtacatctt tggtaaaatc tgcctctccc
     1561 acagatacgc cgccactggt aatcaacaca tcggcttgct gttgggcttg cctgaaagtt
     1621 tgctcaaaca gaattgggtc atcaggcaaa atcccaaaat ctaaaatctc gcagttgagt
     1681 ttttccagca ttaaacgcac cgcaaaacgg ttggtgtcgt aaatttttcc ctcactcaaa
     1741 ggctcgccaa ctgaggttaa ttcatcgccg gttgaaagaa ttgccacttt taattttaca
     1801 aaaacaggca cagaagcaat accgagtgaa gctagcaacg gtaaactggc tacattcaat
     1861 aatgagcctt ttttcaagac caatgccccc tgtttaacat cttccccaat gcggcgaatg
     1921 ttactgccta attttggaat atggttaaag gttacagagc catcggaatt taacgtagtt
     1981 tcctcttgca ttacaacggc atcaacgccc tttggcacta atgctcccgt cataatccgc
     2041 acgcattcgc ctgcctttat ttcgccgtta aacgggttac cggcaaaggc tttaccagcc
     2101 acattcaagg ttaaattttg tgctaaatct gaaatacgaa ccgcgtagcc gtccatcgcc
     2161 gaattatcaa aattcggtac attaatcggg gaaaaaatat cctctgccaa cactcggtta
     2221 gcacactcat ttaacggaag ttgttccacc aatttaggtg tcgataaacg agcaagcata
     2281 ttatctaacg catcactcaa agccaaaagt gccataattt cctacctatt caacgtttag
     2341 ctaatttgta caaagaaatc ccgtacgcca atcaacagat tattcaccgc aatcgcagcc
     2401 agaattaacc ccatcactcg gctgataatc gcagcccctg cattaccaat aaggtgctga
     2461 atacggtttg ccgctaatag caacaaatag gtaataaaga gtaccaaaag cataatgccg
     2521 gcggtgataa tttgatcgcc gatatgaaaa cggtgattgt cggttaataa tacgattgcc
     2581 atcatcgccc cgggagaagc aatcgacggt acagctagcg gataaaccgc caattcattc
     2641 agattactgc tgatccgcat ttcttgctcg ggcttgcttt cgccaaaaat catcgttaaa
     2701 gcaaataaca acagcactaa gccgcctgcc gcttggaatg caggtaacgg aatctgcatt
     2761 gattctaaca gcacttgccc accgataagg aagaaaatca aaataccggc ggcaatcaag
     2821 accgcattta gtgcaatttt acgccgtgct tcaatcggca aaccaatggt ttttgccaaa
     2881 taaacaggaa cagaaccaat cgggtcgatc accgcccata aaaccacaaa ttgtaccgct
     2941 aatgaatcaa acatattctc tcctgttatc ttgataattt gcaaaatttt agcataaaac
     3001 aaccgcttgc acggcttttt cttacagata gctcaccggt aacgctacca aattttcact
     3061 taaataaagt ttggtcggat attggttaat aatcgctccc tgccctaatt tccattcact
     3121 agaaactgag tttagcaagt caaaactttt tgccattttt ttggttgggc ttgccgtgac
     3181 cttaatttct atcggataaa gcgtgcgatc atattcaata attaagtcga tctctttctg
     3241 gttagtatca cggtaaaaat aaatcggcgg ctcaattcct tgattatgaa aggattttat
     3301 aatttggctt accacaaagg tttcaaagaa ctgccagctt tttgcccctt gagcaatagt
     3361 ttcgggggta agccatttgg ttaaatacgc cattaacccg gtgtctagaa aatacacttt
     3421 tggggtctta attgcccgtt tcaaatgatt gttgtggtat ggctggagca aatagataat
     3481 gccggaagtc tgcaaaatgg cgacccaacg tttaatcgtt tcattcgata ctccaacttc
     3541 ttgagcaata ttactgtaat tgagtagctc accactacga gaggcaatag agaccataaa
     3601 acgggtaaaa tccgttgtgc tggcaatatt ggttaattgg cgaacatctc gctcaatgta
     3661 ggtcgctaca taagagcgat aataaatctc ccaatccacc tcttgtgcat ataaacgagg
     3721 catatcgcct ttatggataa gctgccagat gttctccggt gattttaatt cttgctcccg
     3781 agctaacaaa tagtcggttg tcggtaaaaa aggttgatcg aacttcaccc ctaaaatttc
     3841 acgcaacgaa agcccttgta attttaaaat agcaatacga ccggcaagtg tttcactcac
     3901 attctgcatt aattcaaagg cttgcgaccc cgaaagtaaa aacaaaccgt tttgctgttt
     3961 tttatcaatt tctaacttta ataacgcaaa aatttcaggc acatactgta cttcgtctaa
     4021 aataagcttg ccttgatggt ttaaaaaaaa caggcgagat tcttgtttag ccagctccag
     4081 caacattggg tcatcaaaag taatatattg atagccctca ccaatatgtt gtaacaatgt
     4141 cgatttacca acctgtcttg cccctgtcac taaaacggca ggaaattgcg ccacgagtcg
     4201 ttttaacagc gattgcattt gccgagaaat catttttcct ccaaaatagc ctaaatc
//
LOCUS       DANLTI010000168         4235 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.170, whole genome shotgun sequence.
ACCESSION   DANLTI010000168 DANLTI010000000
VERSION     DANLTI010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4235
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.170"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            31..1032
                     /gene="pdxA"
                     /locus_tag="PXB09_002489"
     CDS             31..1032
                     /gene="pdxA"
                     /locus_tag="PXB09_002489"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDL5234545.1"
                     /translation="MKPILGITMGDAAGIGPEVIIKALANQRIYELAHPVVIGDRKII
                     QRALPIVHSELKLRILNNLDNFVAEYGVIDILDLNNLPEDLPFAQVDPRAGKAAYEYI
                     EEAVNLAMGGKIHAIVTAPLNKEALHAGGKPFPGHTEILATLSNTKDYSMMLTSEKLN
                     VIHVTTHVQLRKACDLITKERVATVIDLAEENARILGFKEPRIAVAGLNPHSGENGMF
                     GDEDQKEIVPAIQEAQAKGFNVTGPVPPDTLFHRAANLNEFDIVVVMYHDQGHIPIKL
                     LGFDTGVNVTVGLPFIRTSVDHGTAFPIAGKGTADSRSMTEALYLGAKMANIKYATH"
     gene            1043..2041
                     /locus_tag="PXB09_002490"
     CDS             1043..2041
                     /locus_tag="PXB09_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HDL5234546.1"
                     /translation="MSTQTSKSIVPIYDGMNKIPGGAMVIPLILGSIIGTFFPEFLNL
                     GSFTTALFKSSAGPLIALLIFATGMQITVRSSGPVLAHTGVVLLFKTIIPALLVVILG
                     LWVGNDGVMGVSLLAMLTVVANSNGGIWLAFTGKYGDYRDKGAYVASAVNDGPFFVLL
                     FLGVSGLADIPLSLMLAAVIPLIIGMVIGNLDPKWTELMKPTGAIVIPFFAFALGTGI
                     NLQSIITGGATGIILGIVASLFTGFLVFIGYKTILRRGNQSGIGFAAGTTAGNAIITP
                     EIVAQADPTLAPFVQTATAQIAAAVLVSAILAPLFAAWVLKRQGGLEQDTIKGENL"
     gene            2038..3264
                     /locus_tag="PXB09_002491"
     CDS             2038..3264
                     /locus_tag="PXB09_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5234547.1"
                     /translation="MKETLLVIADDLTGANDTAVMFAESGFDTVLKTKVSALAQIHPD
                     KAQVISVSTDSRAIGEKAKELTQIAISNAIQNSIGQIYLKIDSTMRGSVKYQIEGAIK
                     AWAGLYPDVKAIICPAYPEMGRTIEAGHLYVNGVPVNETASGKDPICPVHSSSMQKLL
                     PDAQVIPCDTVDNLQASIENSEYKQIVIDAKTHEDLSMIAQVINHIGNKIIPVGSAGL
                     AQKLKNIQNQQQPERNLKLGRALIVVTSIHETSQLQVDEYISTLGGKSIVFNPSPSQL
                     INYSQSEHSLKLQLNALIRFSRDHVIIRANPAKVVNAKSANITETSKEISQHLADLSK
                     FCLDNEKFDSLILFGGDGAAALLDQMNVTEMNVQYAVVPGVPLCSIEKGNYSGITVMT
                     KSGGFGNNTLLSNIMN"
     gene            3372..4127
                     /locus_tag="PXB09_002492"
     CDS             3372..4127
                     /locus_tag="PXB09_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5234548.1"
                     /translation="MSKNRLEQILLFLKNHNIATVEQLVKVTEASPATIRRDLIKLDE
                     EGVVIRTHGGVSLNQFIPFQPTTNEKQFKQIVEKERIAEYAVSLISPGNSILLDAGTT
                     TLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELIITGGRVDNSSQSCIGNHSLTLLE
                     NINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQNAKQKVLVADSSKYGKYSLFRA
                     TQLDNFTQIITDKGLPIEYSQALSSNDFKLSLV"
BASE COUNT         1385 a          746 c          784 g         1320 t
ORIGIN      
        1 aaaatgatta atttcaatca aggagtaaat atgaaaccta tattgggaat tacgatggga
       61 gatgccgccg gtatcggacc agaagttatt attaaagcat tagctaatca acggatttat
      121 gagttagcac accctgttgt gatcggtgat cgaaaaatta tacaacgagc cttacctatt
      181 gttcattcag aattgaaatt aagaattctc aataatctag ataactttgt agccgaatat
      241 ggcgttattg atattttaga tttgaataac ctgcctgaag atttgccttt tgctcaagtt
      301 gatccgcgtg ctggaaaagc agcttatgaa tatattgaag aggcagttaa tttagcaatg
      361 ggaggaaaaa tccacgctat tgttacagca ccactgaata aagaagccct acacgcaggt
      421 ggtaaaccat ttcctggcca tacagagatc cttgcaaccc tcagtaatac taaagattac
      481 tcaatgatgc taaccagtga aaaactcaat gttattcacg ttactactca cgtccaactt
      541 cgtaaagcct gtgatttaat taccaaagaa cgagttgcta cagttattga tttagcagaa
      601 gaaaatgctc gcattcttgg gtttaaagaa cctcgtattg cagtcgctgg tttaaatcct
      661 cattcaggtg aaaatggaat gtttggcgat gaagatcaaa aagaaattgt tcccgcaatt
      721 caagaggctc aagccaaagg gtttaatgtt acagggcctg tccctccgga tactttattt
      781 caccgtgcag ctaacctaaa tgaattcgat attgttgttg tgatgtatca cgatcaaggg
      841 catatcccta tcaaattatt aggctttgat acaggtgtaa acgttactgt cggtcttcca
      901 tttattcgaa catctgtcga tcacggaact gctttcccaa tagcaggcaa aggaacagca
      961 gatagtcgta gtatgactga agcactctat ttgggtgcaa aaatggcaaa tatcaaatat
     1021 gcgacacact aaggagatta atatgtctac tcaaacatct aaatccatcg tcccgatata
     1081 tgatggtatg aataaaattc ctggcggtgc aatggtaata ccgctaattc ttggttctat
     1141 tattggtaca ttctttcctg aatttttaaa tttaggttca tttacgacgg ctttattcaa
     1201 atcatcagca ggaccactta ttgcactatt aattttcgct acaggtatgc aaattaccgt
     1261 gagaagttct ggacctgtac ttgcccatac cggtgttgta ttactattta aaactattat
     1321 tcccgctctt ttagttgtga ttttaggatt atgggtaggt aatgatggtg ttatgggcgt
     1381 ttctttatta gctatgctaa ctgttgttgc aaattcaaat ggtggtattt ggttagcgtt
     1441 tacagggaaa tatggtgatt atagagataa aggagcttat gtcgcttcgg ctgttaatga
     1501 tggacctttc tttgttttac tatttttagg tgtatcagga ttagcagata ttcctctttc
     1561 attaatgctt gcagctgtta ttcctcttat tattggtatg gttattggta acttagatcc
     1621 taaatggaca gagttaatga aaccaacagg tgcaatagtc attcctttct ttgcttttgc
     1681 attaggaaca ggaatcaatc tgcaatctat tattactgga ggagcaacag gaattatttt
     1741 aggtatcgta gcttctctct ttacaggttt tcttgtattt atcggttaca aaacaatttt
     1801 aagacgtggt aatcaatcag gaatcgggtt tgcagcagga actactgctg gaaatgccat
     1861 tattacacct gaaattgttg ctcaagcaga ccctacatta gcaccttttg ttcaaactgc
     1921 gactgcacag attgccgcag ctgtattagt ttcagcaatc ttagctccat tatttgcagc
     1981 gtgggtttta aaacgtcaag gtggcttaga acaagacact ataaaaggag aaaatctatg
     2041 aaagagacac tcttagttat tgctgatgac cttactggtg caaatgatac cgcggttatg
     2101 tttgctgaat caggatttga cactgtctta aaaactaaag tttcggcatt agcccaaatt
     2161 catcctgata aagcccaagt aatttctgtt tctacagatt caagagcaat tggagagaaa
     2221 gcaaaagagc tgactcaaat tgcaattagc aatgctattc aaaatagtat cgggcaaatt
     2281 taccttaaaa ttgattccac aatgagaggc tctgttaaat atcagattga aggtgctatt
     2341 aaagcttggg ctggtttata tcccgatgtt aaagcaatta tttgtcctgc atatccagaa
     2401 atgggaagaa ctatagaagc tggtcattta tatgttaatg gtgttcctgt aaatgaaact
     2461 gcttcaggaa aagatcctat ctgccctgtg cattcatctt ctatgcaaaa actattgcct
     2521 gatgctcaag taatcccgtg tgatacggtc gataatttgc aggcatctat tgaaaatagt
     2581 gaatataaac agatcgttat tgatgctaaa acgcacgaag atctctcaat gattgcccaa
     2641 gtcataaatc acataggtaa taaaattatt cctgttggct cagccggatt ggcacagaag
     2701 ttgaaaaata tccaaaatca acaacaacca gagcgaaatc ttaaattagg tagagcatta
     2761 attgtcgtaa cctcaattca cgaaacaagc caactgcaag ttgatgaata tatttcaact
     2821 ttaggaggaa aatctattgt atttaatcct tcgccttcac agttgattaa ctactcgcaa
     2881 tcagaacatt cactgaaact acaattaaac gctctaatac gttttagtag agatcatgtt
     2941 attattcggg caaaccctgc aaaagttgta aatgcaaaat ctgccaatat cacggaaact
     3001 tctaaagaaa tttctcaaca tttagctgat ttaagtaaat tctgccttga taatgaaaaa
     3061 tttgatagcc ttatattatt tggtggagat ggtgcagcag cattattaga tcaaatgaat
     3121 gtaacagaga tgaatgtaca atatgcggta gtaccgggcg ttcctttatg ctccattgaa
     3181 aagggcaact actcaggcat cactgtaatg actaaatctg gaggatttgg aaacaacaca
     3241 ctcttaagca atataatgaa ctagtaacaa caaagaacct aaagcaacaa tgttttaggt
     3301 tctttaattt taactatctt atttttaaaa aattacttat agtaaaagca gttaaaaatt
     3361 agagagttta tatgtctaaa aaccgtctag aacaaatttt actattccta aaaaaccaca
     3421 atattgctac cgtagagcaa ctggtaaaag tgactgaggc ttctcctgca actatccgcc
     3481 gtgatttaat aaaattagat gaagaaggcg tcgtgattcg cacacacgga ggggtcagct
     3541 taaaccaatt tataccgttt caaccaacaa caaatgagaa gcaatttaag caaattgtcg
     3601 aaaaagaacg catagctgaa tatgccgttt cgcttatttc accgggaaat tctattttat
     3661 tagatgctgg cactacaacg ctatgcattg cgaaaaaaat cgctcatatg ccacttcgag
     3721 tgattacaac tgatctacat attgctttat tactctctga atataagcaa atagaattaa
     3781 ttattacagg gggacgagta gataatagta gtcaatcttg tattggtaat catagtttaa
     3841 ctttattaga aaatattaat cctgatattg cttttgtgag ctgtaattct tggagcttag
     3901 aaaaaggagt tacagcacct acagaagaga aagctaattt aaaaagaatg ctccaacaaa
     3961 acgccaaaca aaaagtactg gttgccgata gcagcaaata tggaaaatac tctttatttc
     4021 gtgcaactca actcgataac tttacacaaa ttatcacaga taaaggacta cctattgaat
     4081 atagccaagc cttgtcaagt aatgatttta agctatcatt agtttaatca tacaagcggt
     4141 cttttttcac taattttttg tatatgaaaa acccagcatt cgctgggttt taaatcttaa
     4201 aacaaaatta tttaattttt gcttctttgt agata
//
LOCUS       DANLTI010000169         4213 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.171, whole genome shotgun sequence.
ACCESSION   DANLTI010000169 DANLTI010000000
VERSION     DANLTI010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4213
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.171"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(111..2300)
                     /gene="yccS"
                     /locus_tag="PXB09_002493"
     CDS             complement(111..2300)
                     /gene="yccS"
                     /locus_tag="PXB09_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDL5234549.1"
                     /translation="MNKFLRYLQHSWLSENVIKTLPMFISLNIAAVSIWQLGISDFAM
                     PLMLGIIAGGLVDLDNSLIGRAKNLIISLVAFSLSSIGASVSLHLGWLFVPVAVVCTF
                     LLVMLGAIGQRYSTIAFGTLIVAVYNSLAYTPEVLWYHNVVMILLGTLLYGLVGILVY
                     LIFPNRTVQENLASAYLALSHYLLAKSAYFDPDDDDLAAKQLALAKANSEVMAAFDKT
                     RVALFYRLSRQHKQQRTQRMLRYYFTAQDILERASSSHYQYHELFQQLSNSDLMFRFQ
                     RVLELQAAACQKIAMSLRHREVYEHGVRGEKALQGLLNSLNYHQERGLKSAYRWRAIA
                     ENLGNIERQLAQIEQGSSSGEHIEPLSKNFTKSHRLIAENITGLSNISQAIKAHLTFE
                     SQLFRHAVRLSIVVLLCSAIVPILGFDSKGYWILLTAIFVCQPNYTATKTRLIQRVIG
                     TIFGVLVGGSFELFNVALSLEAQLGLIVLTGSLYTFFRLVHYGFSTFYITVLVMISLD
                     IAGVSLESGILMRMLDTLLGTAIAWLAVAFLWPDWKYLNLQRNLHNGLKASGQYLRHI
                     IAQLQFGYNEQLPYRIARRDVHNHLSALSNAITNMYSEPQKYANDLTFAPKLLGIAYT
                     LLGYISTLGAYRIASREINQQVDFSAMFFSHAREVANIIGQIASESRSFAKLSEKLTA
                     IDQDLTQFEQENQQKQNDLALVLIQQLRLIVQLLPQLNSILQLKSVR"
     gene            complement(2344..2802)
                     /locus_tag="PXB09_002494"
     CDS             complement(2344..2802)
                     /locus_tag="PXB09_002494"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDL5234550.1"
                     /translation="MKTTVRTIAKQKQIALVAHDSCKQDLIRWTQTHQAQLASHKLYA
                     TGTTGHLLARETGLEITSLLSGPMGGDQQLGGLIAEKKIDLLVFFWDPMNAAPHDPDV
                     KALMRIATVWNIPVAINETTANFLLNADLFNQAISVNVPDYDGYLAERLG"
     gene            2928..4202
                     /gene="thrC"
                     /locus_tag="PXB09_002495"
     CDS             2928..4202
                     /gene="thrC"
                     /locus_tag="PXB09_002495"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDL5234551.1"
                     /translation="MNLYNIKHPEEQVNFAQAVRQGLGKNQGLFFPEVLPKLDSIDEL
                     LDLPLVKRSQKILSALIGEELPQETLNAMVKNAFTFPAPLAKVNDDIYALELFHGPTL
                     AFKDFGGRFMAQALANVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKI
                     SPLQEKLFCTLGGNIRTVAIESDFDACQALVKQAFDDAELRQAIGLNSANSINISRLL
                     AQICYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFIASTNANDT
                     VPRYLQSGKWEPNATVATLSNAMDVSRPNNWPRVEELFKRNGWSLSELGSAALNDAET
                     EAALKAQYAEGYLCEPHGAIAYQSLKDQLQQGETGIFLCTAHPAKFKESVEHILAIEL
                     PLPEALDKHNKLPLLSDEMAADFATLRAYLLK"
BASE COUNT         1237 a          964 c          879 g         1133 t
ORIGIN      
        1 tctatatgtc cttcaaaaaa aacaaaacat caacaaaaaa ttaacaaaac cataatattt
       61 ttattgattt tgtgaagcat gtcacatttt atgatttaat tataggctca ctaccttaca
      121 ctcttgagct gtaatatact atttaactgc ggtaataact gcacgatcag tctgagttgt
      181 tgtatcaaca ctaaggcgag gtcattttgc ttttgctgat tttcttgctc aaattgggtg
      241 aggtcttggt cgatagcggt caatttttcc gataattttg caaatgaacg gctctctgag
      301 gcaatttgcc cgatgatgtt tgccacctct ctggcgtgtg agaagaacat tgcggaaaaa
      361 tccacttgtt gattaatctc tcggctagca atacggtaag cccctaaggt ggaaatataa
      421 cccagcaagg tgtaagcaat acctaacaat tttggggcga aggttaaatc gttcgcatat
      481 ttttgtggtt cgctgtacat attggtaatc gcattactca gtgccgataa atggttatgc
      541 acatcacggc gggcaatacg gtaaggcagt tgctcgttat aaccaaactg caactgggcg
      601 ataatatggc gtaaatattg cccactggct ttcaagccgt tatgtaagtt acgttgtaaa
      661 tttaaatact tccaatccgg ccataagaat gccactgcca gccacgcaat cgctgtacct
      721 agtaaggtat caagcattcg cattaagatg ccgctttcaa ggctcacgcc tgcaatatca
      781 aggcttatca ttaccaacac agtgatataa aaggttgaaa agccataatg taccaagcgg
      841 aaaaaggtat aaagcgaacc ggtcagtacg attagcccaa gctgggcttc gaggctgagc
      901 gccacgttaa acagttcaaa agagccacca accagcacgc cgaaaattgt gccgatcaca
      961 cgctgaatca gtcgggtctt agtagcagtg taattcggtt ggcagacaaa aatggctgtg
     1021 agtaaaatcc agtagccttt gctatcaaag cctaaaatcg gcacaatcgc actgcacaac
     1081 agcaccacta tcgacaaccg aacggcgtgt cgaaacagtt gggattcaaa ggttaaatgg
     1141 gctttaattg cttggctgat attgcttaag ccggtaatat tttcggcgat caagcggtga
     1201 gattttgtga aatttttact taacggttca atatgctcac cactgcttga gccttgttca
     1261 atctgggcta gttgccgctc aatattgcct aaattttctg caatagcacg ccagcgataa
     1321 gcacttttca agccccgttc ttgatgataa ttcaatgaat taagcaagcc ctgcaaggct
     1381 ttttcgccac gaacgccgtg ttcatatact tctctatggc gtaacgacat tgcaattttt
     1441 tgacacgccg cagcctgtaa ttccagcacc cgttgaaagc ggaacattaa atcactgtta
     1501 cttaattgtt ggaacagttc gtgatattga taatggctgg aacttgcccg ctctaaaata
     1561 tcttgagcgg tgaaatagta acgcaacatt cgctgtgtcc gttgctgctt gtgctggcgg
     1621 cttaggcggt agaatagggc aactctggtt ttatcaaagg cagccatcac ctcactattg
     1681 gctttcgcca aggctagttg tttggcagct aaatcgtcat catcagggtc aaaataggca
     1741 gatttcgcca gtaaataatg gctcaacgca aggtaggcgg acgctaaatt ctcctgcacg
     1801 gttcgattcg ggaaaatcag gtacaccaaa ataccgacca aaccatagag taaggtgcca
     1861 agtaagatca tcaccacatt gtgataccac aatacttcgg gcgtataagc caggctgtta
     1921 taaaccgcca caatcagcgt gccaaaagca atggtactat agcgttgccc gattgcccct
     1981 aacattacca gcaaaaaggt gcaaaccacc gccaccggca caaacagcca gcccaaatgg
     2041 agcgacacac tcgccccaat cgaggaaagc gagaacgcca ctaggctgat aatcagattt
     2101 ttcgctcgtc cgattaggct gttgtctaaa tccaccaaac cgccggcgat aatgcctaac
     2161 atcaacggca tcgcaaaatc agaaataccg agctgccaaa tgctgaccgc cgcaatgttt
     2221 agcgaaataa acatcggcag ggttttaatt acattttccg aaagccaact gtgttgtaga
     2281 tatcttaaaa atttattcat atttgctcat ttcgggcagg cacaggacct gcccctacct
     2341 acactacccc aaacgttctg ccaaatagcc atcataatcc ggcacattca cgctgattgc
     2401 ttgattgaac aaatccgcat ttaacagaaa attagcggtg gtttcgttaa tcgccaccgg
     2461 aatattccaa acggtcgcaa tccgcatcag ggctttcaca tcaggatcgt gcggagcggc
     2521 attcatcgga tcccaaaaga acaccagcag atcaattttc ttttctgcga tcagcccgcc
     2581 taattgctga tcgcccccca tcgggccgct taacaatgaa gtaatttcaa gccctgtttc
     2641 tctggcgagc aaatgcccgg tagtgccggt ggcatatagc ttatgcgagg caagttgggc
     2701 ttgatgagtt tgtgtccaac gaattaaatc ttgtttacag ctatcgtgag ccactaaggc
     2761 aatctgtttt tgttttgcga tggttctgac ggtggttttc atttttagct cctttgcaaa
     2821 atttttcaca aatcataccg cttatttttc gcttttgcat tgactaatca cggcttatgg
     2881 ctaaaatcag gtaaaaattc gcattttaaa acaaaggatt aaccgcaatg aacttataca
     2941 acatcaaaca ccctgaagaa caagtcaatt tcgcccaagc ggtacgccaa ggcttaggca
     3001 aaaatcaagg gctatttttc cctgaagtgt tacctaaatt agatagcatt gatgaattat
     3061 tggatttacc tttggttaaa cgcagccaaa aaattctttc agccttaatc ggcgaagagt
     3121 taccgcaaga aaccttaaat gcaatggtaa aaaatgcgtt cactttcccg gcaccgcttg
     3181 ccaaagtcaa tgatgatatt tatgcgttag aattatttca cggtccgact ttagccttca
     3241 aagattttgg tgggcgcttt atggctcaag ccttagccaa tgtacgagga gacggcaaaa
     3301 ttactatttt aaccgctacc tcaggtgaca ccggtgcggc ggtggctcat gctttctatg
     3361 gtttggaaaa tatcaacgtg gtcattcttt acccgaaagg caaaatcagc ccattacaag
     3421 aaaaattatt ctgtacctta ggcggtaata ttcgcactgt tgcgattgaa tccgactttg
     3481 atgcttgcca agccttagtg aaacaagcct ttgatgatgc cgagctacgc caagcgattg
     3541 gtttaaattc cgcaaattcc atcaacatta gccgtttact ggctcaaatt tgctactact
     3601 ttgaagcagt tgctcagtta ccaaaagaaa aacgagataa cgtagtggtt tcagtaccaa
     3661 gcggtaattt cggtaactta accgccggct taattgccaa aacattaggt ttaccgatta
     3721 aacgttttat tgcctcaacc aatgccaatg acaccgtgcc acgctattta caatcaggca
     3781 aatgggaacc aaacgcaacc gttgcaaccc tttctaatgc aatggacgta agccgcccga
     3841 acaactggcc acgagttgaa gaattattta aacgcaatgg ctggagtttg tctgaattgg
     3901 gttctgccgc attaaacgat gccgaaaccg aagcggcttt gaaagctcaa tatgcagaag
     3961 gttatctgtg tgagcctcac ggtgctattg cttaccaaag cttgaaagat cagctacaac
     4021 aaggcgaaac cggtattttc ttatgcaccg ctcacccggc aaaattcaaa gagtcggtgg
     4081 aacacatttt agcgattgaa ttgccgttac cggaagcatt agataagcac aacaaactgc
     4141 cactgttatc cgatgaaatg gcagcagatt ttgcaacatt gcgtgcatat ttgttgaaat
     4201 aaatattcaa taa
//
LOCUS       DANLTI010000170         4147 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.172, whole genome shotgun sequence.
ACCESSION   DANLTI010000170 DANLTI010000000
VERSION     DANLTI010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4147
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.172"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..452
                     /locus_tag="PXB09_002496"
     CDS             <1..452
                     /locus_tag="PXB09_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234552.1"
                     /translation="IKNGICLNFARQLISAKHPETKKRISLHLKILDFDKGRNTYLAP
                     ADLFILDEHLNEFILGNGGDEIEKISKNNKTQFSSTIRENQINFIRALLYMDYGIETP
                     QEVKNAINSGELGRKIEKFRRENPNIENDKNFKFPTSVTLSNWYSKA"
     gene            530..781
                     /locus_tag="PXB09_002497"
     CDS             530..781
                     /locus_tag="PXB09_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234553.1"
                     /translation="MQLQKTISTFTQPNHRGIYVMTYSEQSYLNVKDVCEMLQLNRST
                     IYRQIKQGIFPKPTKIGKSSRWKFADIKAFLEPKPQEAN"
     gene            781..1161
                     /locus_tag="PXB09_002498"
     CDS             781..1161
                     /locus_tag="PXB09_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5234554.1"
                     /translation="MAGLSIICPFCGNTARIRGSSRPSLLSYQAQLTCSNCGQLKADF
                     VGQLINIKRAVFIECDEANQWDKPENELIKEGKIQGKDNAQRLKELRGSQQDLFAKVP
                     GQLPPEKITPAEKIAKRANLSKTH"
     gene            1472..2533
                     /locus_tag="PXB09_002499"
     CDS             1472..2533
                     /locus_tag="PXB09_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDL5234555.1"
                     /translation="MKDLSPNQKQYTPFSAIMQKNLMDLLTKSARSPYSFSTVAKSTA
                     GRENPELHNTANSSTPLTRAIFIRSLHTPKERRNKACSSMVACSGQGSPLAVFGSPFV
                     AVFSPRYTLSPCTVRSVADSPLKLTNGLQKMNPSQITGKNRLNSFLFNNNQNDYSLLF
                     TNAKQSTPISAKISKNQDLCLTTLNRSPYASRAFAKSKAECGNSKEHQANNSTPLTRA
                     FFVRSSRTPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLWKMLAIAPK
                     NQHQELSKMKAFAYSFLCAIRTPETDTYQETVVRIISDSEQNARFQLTADYRLLLPRP
                     VAKIRLNSTAYTVKGGIYA"
     gene            2526..2690
                     /locus_tag="PXB09_002500"
     CDS             2526..2690
                     /locus_tag="PXB09_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234556.1"
                     /translation="MLNYSDIEQIRYFMDQAEEALDNNEEFKAVAELNTAQQFILALL
                     MNYEQGGENE"
     gene            2683..3318
                     /locus_tag="PXB09_002501"
     CDS             2683..3318
                     /locus_tag="PXB09_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234557.1"
                     /translation="MNNTTGQATQRNWQEIIANLQRLSESGESTIEIAKRYEAFSKTA
                     EQIQALVNNNGSEAEKEAFFAPVERFYLGLLETETRLKDAIAKDEENAQKLKEQKAAR
                     EAEQKRWDNLPFYAKDKFSDLICIESRETLEDKFFAISCMFDALKAVPNLLEIGLREE
                     GKDSVIDRLAEMSKLYLLFVDEQFSLLANEIQSGKYGKLDLNGSQNKGDLC"
     gene            3312..3530
                     /locus_tag="PXB09_002502"
     CDS             3312..3530
                     /locus_tag="PXB09_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234558.1"
                     /translation="MLTHRITLPDGTEIEFFAETDKETFAEIQRDLEGLKLPTFAEFV
                     AQERKKHRAKQAVKKARKIAKLARRKNR"
     gene            3672..>4147
                     /locus_tag="PXB09_002503"
     CDS             3672..>4147
                     /locus_tag="PXB09_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234559.1"
                     /translation="METALQLAQHLTGWTEEENSQAILKNFLDWKETFGEKTREETKI
                     VETLLDWINENEASFIEYPFNQEQRTPPKVAGYRILANNSTKTNEYFFIYPKQFKETL
                     AEFPLLMACTKLHEAGILHKPPRPEKGYEFQYTIAPKITGGSKKRAYKIVPIALEE"
BASE COUNT         1507 a          860 c          790 g          990 t
ORIGIN      
        1 tcattaaaaa tggaatttgt ttaaattttg caagacaatt aatatcagca aagcacccag
       61 aaacaaaaaa aagaataagt ttacatctaa aaatactgga ttttgacaaa ggcagaaata
      121 cttatttagc acctgcagat ttatttattc ttgatgaaca tctaaatgag ttcatattag
      181 gtaacggcgg agatgaaata gaaaaaatat caaagaataa caaaactcaa ttcagctcaa
      241 caatacgaga aaaccaaatc aattttatta gagccttgct ttatatggat tatgggatag
      301 aaacgcctca agaagtaaaa aacgccatta attcagggga actaggcaga aaaatagaga
      361 aatttaggag agaaaacccc aatatagaga acgataaaaa tttcaaattc cctacaagtg
      421 taacccttag caactggtat tcaaaagcct aaaatattgg aaatttccga atctactttg
      481 gaaatttcca aacttctaaa acctactcac ctcacaatct cccccaacaa tgcaactaca
      541 aaagacaata agcacattca cgcaaccaaa ccacaggggg atttatgtaa tgacctattc
      601 agaacaaagc tatttaaacg tgaaagatgt atgcgaaatg ctacaactca accgctcaac
      661 tatttatcga caaattaagc aagggatttt ccctaagcca actaagatcg gaaaatcaag
      721 ccggtggaaa tttgccgaca tcaaagcatt tttagagcca aaaccacagg aggcgaacta
      781 atggcagggc tttctattat ttgcccgttt tgtggcaata ccgcacgaat tagaggcagt
      841 tctcgcccta gccttttaag ttatcaagca cagctaactt gttcaaattg cggacaatta
      901 aaagccgact ttgtagggca gctaatcaac atcaaacggg ccgtatttat tgagtgtgat
      961 gaagcaaatc aatgggataa acccgaaaat gaactaatca aggagggaaa aattcaaggc
     1021 aaagacaatg ctcaacgcct caaagaacta agaggctcac agcaagattt atttgcaaag
     1081 gtgccggggc aactaccgcc cgagaagatc actccggcgg agaaaatcgc caagcgggca
     1141 aacctttcaa aaacgcatta aacaggggga taaatggcaa caaaaaagcc ccgcaaggca
     1201 aaccatacgg agctattaaa atcgcataat gcgaaagata tgcaaagaaa ttaaagcagg
     1261 cttgacgatt tctgaaggtg ttagattctt tctaaagtct ttagggatag gtttatttct
     1321 agcattgttt ttttattttt tgccgtattt agcagaattt ataatcgccg taaaaaaaca
     1381 actagcaaaa aaatcggctt actttcaatg ataaaagcaa gccgaaatga caatccaaat
     1441 ttttaacttt aaataaagag tacaagaaga aatgaaagat ttatctccaa atcagaaaca
     1501 atatacgcca ttttcggcta taatgcaaaa aaatttaatg gatttattga caaaatccgc
     1561 ccgttcgcct tattctttct ctaccgttgc aaaatcaacg gcagggcgtg agaaccctga
     1621 actacataat acggcgaaca gtagcacgcc tttaacccgt gctattttta ttcgtagctt
     1681 acacacacct aaagaacgcc gaaataaggc gtgttcgtct atggtagcgt gtagcgggca
     1741 aggttcgccc ttggctgttt ttggttcgcc gtttgtagca gttttctcac cccgttacac
     1801 gctatcgccc tgcaccgtga gaagtgtagc cgatagtcct ttaaaattaa caaacggact
     1861 acaaaaaatg aaccctagcc aaattacagg caaaaaccgc ctaaactctt ttctatttaa
     1921 caataatcaa aatgattatt cgctattatt tactaatgca aaacaatcaa ccccgatttc
     1981 tgctaaaata agcaaaaatc aagatttatg cttgacaacc ctcaatcgtt cgccttatgc
     2041 tagccgtgct tttgcaaaat caaaagccga gtgtggaaac tcgaaagaac atcaggcgaa
     2101 caatagcacg cctttaactc gtgctttttt tgttcgtagc tcacgcacac ccaaagaatg
     2161 ccaaaataag gcgtgttcgt ctatggtagc gtgtagcggg caaggtttcg cccttgactg
     2221 cttacctgat gttgcagttt tccaccccgt tacacgctat cgccctacat tgtggaaaat
     2281 gttagcgata gcccctaaaa atcaacatca ggagctatca aaaatgaaag cattcgctta
     2341 ttcattcctt tgtgctattc gcacacccga aacagatact tatcaagaaa ccgtagtacg
     2401 cattatttca gacagcgaac aaaacgcccg ttttcagctt acagccgatt atcgcttact
     2461 actcccccgc cctgttgcaa aaatccgcct aaattctacc gcttacacgg tgaaaggggg
     2521 gatttatgct taattattcc gatattgaac aaatccgcta ttttatggat caagccgaag
     2581 aggctttaga caataatgaa gagttcaaag ccgtagcaga acttaacaca gcacaacaat
     2641 ttattctggc tttattaatg aactacgaac aagggggtga aaatgaataa tacaacagga
     2701 caagctacgc aaagaaactg gcaagaaatt atcgctaatt tgcagagact cagcgaatcc
     2761 ggggaaagca caatcgaaat cgctaaacgc tatgaggcat tttctaaaac cgccgagcaa
     2821 atccaagccc tagtgaataa caacggcagc gaagccgaaa aagaggcgtt ttttgcccct
     2881 gttgagcgtt tttatcttgg cttactagaa accgaaacac gcttaaaaga tgccatagcc
     2941 aaagacgaag aaaacgccca aaaattgaaa gagcaaaaag cagctagaga ggcagagcaa
     3001 aaaagatggg acaacctacc tttctacgcc aaagacaaat tcagtgattt aatttgcatt
     3061 gaaagccgag aaacgcttga agataaattc tttgcgatct cttgtatgtt cgatgcccta
     3121 aaagccgtac ctaatctatt agaaataggc ttgcgtgaag aaggcaaaga cagtgttata
     3181 gaccgattag ccgaaatgag caaactctat ttactgtttg tagatgagca attttcacta
     3241 ctggcaaacg aaattcaaag cggtaaatat ggcaagttag acctaaacgg ctcacagaat
     3301 aagggggatt tatgctaacg caccgcatta cactccctga cggcacagaa attgaatttt
     3361 ttgcagaaac cgacaaagaa acatttgcag aaattcaaag ggacttagag ggcttgaaat
     3421 tgccaacctt tgccgagttt gttgcccaag agcggaaaaa acaccgagca aaacaagcgg
     3481 tcaaaaaagc ccgaaaaatt gcaaaattag caagacggaa aaaccgctag cacctatcaa
     3541 aaagacttat tattgcagaa aatcacgctt taataaaaac gacctataaa gcaatccgca
     3601 agaaatggtt aagtttaact gaaaatatga gcggacaggt tcagcgggta gcgtgcgata
     3661 gattcgcaat aatggaaacc gccttgcagt tagcccaaca tttaacaggc tggacagagg
     3721 aagagaacag ccaagcgatt ttaaaaaact tcctagactg gaaagaaact ttcggcgaaa
     3781 aaacaagaga agaaactaaa atagtagaaa ccttgctaga ttggataaat gaaaatgagg
     3841 cgagttttat cgagtaccca ttcaaccaag agcaaagaac accgcctaaa gttgccggct
     3901 atagaatact tgcgaataac agcactaaaa caaatgagta ctttttcatt taccctaagc
     3961 aatttaaaga aacgctggca gaatttccgc tattgatggc ttgcaccaag ttacacgagg
     4021 cagggatttt acataagcca ccacgcccag aaaaaggcta tgaatttcag tacacaatag
     4081 cccctaaaat aacaggaggg agcaaaaaaa gagcttataa aatcgtaccg atagcattgg
     4141 aagaaga
//
LOCUS       DANLTI010000171         4127 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.173, whole genome shotgun sequence.
ACCESSION   DANLTI010000171 DANLTI010000000
VERSION     DANLTI010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.173"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXB09_002504"
     CDS             complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXB09_002504"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDL5234560.1"
                     /translation="MQKINPVQTFAWNALEQHKADNLSIPQLFAEDPNRFDKYSLRFE
                     DQLLVDFSKNAINEKTLTLLRQLANECGLESAKNAMFSGKKINRTENRAVLHVALRNR
                     ANTPIAVDGKDVMPEVNAVLAKMKDFCERVISGEWKGYTGKTITDVINIGIGGSDLGP
                     YMVTEALRPYKNHLNMHFVSNVDGTHIAEVLRKVNPETTLVLVASKTFTTQETMTNAL
                     SARKWLLDSAKDESAVAKHFVALSTNAKEVEKFGIDTANMFEFWDWVGGRYSLWSAIG
                     LSIALSLGFENFEQLLAGAHAMDKHFLITPIEKNIPTTLALVGIWNNNFLGAESEAIL
                     PYDQYMHRFAAYFQQGNMESNGKFVGRDGKPVTHQTGPIIWGEPGTNGQHAFYQLIHQ
                     GTKLIPCDFIAPAQTHNPLSDHHNKLLSNFFAQTEALAFGKSKETVEKEFLDAGKTLE
                     EVAEIVPFKVFSGNKPTNSILVQKITPYSLGALIAMYEHKIFVQGVLFNIYSFDQWGV
                     ELGKQLANRILPELETDEKINSHDSSTNGLINQFKAWR"
     gene            complement(1903..2151)
                     /locus_tag="PXB09_002505"
     CDS             complement(1903..2151)
                     /locus_tag="PXB09_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDL5234561.1"
                     /translation="MLTPKNLEAIAQQLHNALPQSLKNVGNDLDEKFKQILQAQLARL
                     DVVTREEFDVQSQVLLRTREKLTELEKRLDELTQRTDE"
     regulatory      2275..2319
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            2323..2991
                     /gene="queC"
                     /locus_tag="PXB09_002506"
     CDS             2323..2991
                     /gene="queC"
                     /locus_tag="PXB09_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDL5234562.1"
                     /translation="MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQR
                     HSIELEKARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNA
                     LFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTP
                     LMYLTKKETWALADKLGAFDYIRDHTHTCYLGVEGGCHDCPSCVLREKGLNEYLAERE
                     VSNV"
     gene            2984..3406
                     /gene="queD"
                     /locus_tag="PXB09_002507"
     CDS             2984..3406
                     /gene="queD"
                     /locus_tag="PXB09_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDL5234563.1"
                     /translation="MFKIAKEFSFDMAHMLDGHDGKCQNLHGHTYKLQVEVAGELFQE
                     GAKRGMVMDYSDLKAVVKQHILEPMDHAFIYDLQSERESQVAQLLIDLNSKVYGIPTR
                     TTAEEMAKYMFEKLEKVGLPVSLIRLWETPTSYCEYSK"
     gene            3406..4032
                     /locus_tag="PXB09_002508"
     CDS             3406..4032
                     /locus_tag="PXB09_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDL5234564.1"
                     /translation="MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPW
                     CDTNYNQFEQWTLSDILAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIE
                     TNGLKEVPAQIDYIATSPKRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKA
                     EHYYLSPCEVEGKMNLLETITQIGLLNQRPNKPKWQLSIQTHKIVGIE"
BASE COUNT         1253 a          757 c          875 g         1242 t
ORIGIN      
        1 tgagtgaaga gtagaggtaa aatagtaagc ctttttaacc agtttattta ttgtacctat
       61 tttagaaaaa agaaaagtag aaaagagata ttaggtaaac tcatagtgca aaagaatata
      121 gaaaaaactg cttgtgtaga aatggcgctt agttcagtcc tcagctaaaa ttttagaaaa
      181 aaagcataga gattttttac ctctatgctt tttattgtat tgactatatt taacgccaag
      241 ccttgaattg gttaattaaa ccatttgtgg agctgtcgtg gctgttgatt ttttcatcgg
      301 tttcgagttc gggtaaaatg cggtttgcaa gctgtttgcc taactccacg ccccattggt
      361 cgaaactgta aatgttgaac agcacgcctt gcacgaagat tttgtgttca tacattgcaa
      421 ttaatgcccc taagctgtac ggggtgattt tttgcaccaa gatagagttg gtcggtttgt
      481 ttccgctgaa cactttaaac ggcacgattt cagctacttc ttccaacgtt ttacctgcat
      541 ctaaaaactc tttttcaact gtttcttttg atttaccgaa agctagtgct tcagtttgag
      601 caaagaagtt agaaagcagt ttgttgtgat gatcgcttaa cggattgtga gtttgtgccg
      661 gtgcgataaa atcacaagga attaattttg tgccttgatg aatgagttga tagaatgcgt
      721 gctgaccgtt agttcccggt tcgccccaaa taatcggacc tgtttggtga gtaaccggtt
      781 tgccgtcacg ccccacaaat ttaccgtttg attccatatt gccttgttgg aaataagccg
      841 caaagcggtg catatattgg tcgtaaggta aaatcgcttc tgattcagca cctaagaaat
      901 tgttattcca aatgccgact aaagctaacg tagttggaat gtttttctca atcggcgtga
      961 ttaagaaatg cttatccatt gcgtgagcac cagcaagtag ctgctcgaag ttctcaaaac
     1021 ctaatgaaag ggcaatcgaa agcccgatgg cagaccataa tgagtaacga ccgccaaccc
     1081 aatcccagaa ttcaaacata ttagcggtat caataccgaa tttttccact tctttggcat
     1141 tggttgaaag tgccacgaaa tgttttgcta ccgcagattc atctttggca gaatcaagta
     1201 gccatttgcg agctgaaagg gcattggtca tcgtttcttg agtggtaaag gtttttgaag
     1261 ccactaacac taacgtggtt tcaggattaa ctttacgcaa cacttcagca atatgcgtgc
     1321 cgtccacgtt agacacaaag tgcatattaa ggtgattttt ataagggcgt aatgcctctg
     1381 ttaccatata aggacctaga tccgagccac caataccgat attgatcaca tcagtaatcg
     1441 ttttgccggt atagcctttc cattcgccgg aaataacacg ctcgcagaaa tctttcattt
     1501 tcgctaacac ggcattcact tccggcatta catctttgcc atcgactgcg attggtgtat
     1561 tggcacggtt acgcagtgca acgtgcaata cggcacggtt ttcagtgcgg ttgatttttt
     1621 tgccggagaa catcgcattt tttgctgatt ccaaaccaca ttcatttgcc agttggcgaa
     1681 gtaaggttaa ggttttttcg ttgatcgcat tttttgaaaa atcgactaat aattgatctt
     1741 caaaacggag ggaatatttg tcgaaacggt ttggatcttc ggcaaaaagt tgaggaatag
     1801 aaaggttgtc tgctttatgt tgctctaagg cattccaagc aaaagtttgc acagggttaa
     1861 ttttttgcat ctgagtttcc ttatactaaa ttaaaaaatc gattattcat ctgttctttg
     1921 agtcagttca tcaagacgtt tttctaattc ggttaatttt tcacgagtgc ggagtaacac
     1981 ttgagattga acatcaaatt cttcacgagt gacaacatca agacgggcta attgggcttg
     2041 aaggatttgc ttaaattttt catctagatc attaccgaca ttttttaagc tttgcggtaa
     2101 ggcgttatgg agttgttgag caatcgcttc taagttcttc ggcgtgagca tatttaaatt
     2161 ccttactata aatgagtatc ccaattttat tgaattttgg gtttaagaga aagcaaattc
     2221 tttgtaaaat atcacctttc gcaaaataca agcaaaaaag accgcttgta ttttttattt
     2281 gtggttcgta aacctcccac acaaaaaaac taaggacaca aaatgactca tcaaaaacca
     2341 aaagccgttg tgattttttc cggcggtcaa gactctacca cttgtttatt ccaagctatt
     2401 gctgaatttg gcaaagaaaa tgtggaagtc gttacctttc aatatgggca acgccattcg
     2461 attgaacttg aaaaagcacg ctggatttct aacgatttag gcgtcaaaca aacgctgatt
     2521 gatacttcgg tgattaaagc gattactacc aatgcgttaa tggataataa tgctgaaatt
     2581 caacaacaag gcagcacacc caataccttt gtggatgggc gtaatgcctt atttctgctt
     2641 tataccgcca tttatgccaa agggcagggc attcaaacta tttttaccgg cgtgtgtgag
     2701 accgatttta gtggttaccc tgattgccga gatgtatttg taaaatcaat gaatgtaacg
     2761 ctaaatttag cgatggacta taatttcaac attcgcacgc cattgatgta tttaactaaa
     2821 aaagaaactt gggcattagc agataagctg ggtgcttttg attatattcg agaccatacc
     2881 cacacctgtt atttaggcgt tgaaggtggt tgccacgact gcccgagttg cgtattgcga
     2941 gaaaaaggct tgaatgaata tttagcagaa agggaggtaa gcaatgttta aaattgctaa
     3001 agaatttagt tttgatatgg ctcatatgct agatggacac gatggcaaat gccaaaactt
     3061 acacggacac acctacaaat tgcaagttga ggtggcaggt gagctatttc aagagggagc
     3121 taaaagagga atggtaatgg actattcgga tctaaaagca gtggtaaaac aacatatttt
     3181 agagccgatg gatcacgctt ttatttacga cttacagagt gagcgtgaaa gccaagtagc
     3241 acaattatta attgatttaa actccaaggt ttatggtatc ccaactcgta ccacagccga
     3301 agaaatggcg aaatatatgt ttgaaaaatt agagaaagtg ggcttaccgg ttagcctaat
     3361 tcgcttgtgg gaaacgccta cttcttattg tgagtacagc aaataatggc ggagttaatt
     3421 tcaaaccctc gttttccgat tgttgagatc tttgaaagct tacaagggga aggctttaat
     3481 accggaatgc cggctatttt tgtacgtttt ggcaaatgca acctcacttg cccgtggtgc
     3541 gataccaatt acaatcaatt tgagcaatgg acgttaagcg atattcttgc caaagtaaga
     3601 agctattctg cgaaaaatgt gattattacc ggaggcgagc caacgattca gcctaattta
     3661 tcgttattat tagaacaatt taaaaaagag ggatattttt tagcgatcga aaccaacggc
     3721 ttaaaagagg ttccggcaca aattgattat attgcgacca gcccaaagcg aatgtaccaa
     3781 gaaaagtatc aacgccgttg cattgaattt gcgaatgaag tccgtatcgt cgttgatgga
     3841 gaagtacagg gtttctgtga gcaaatagaa agccaaatta aagctgagca ttactatctt
     3901 tcaccttgtg aggtagaggg aaaaatgaac ttgctggaaa ccatcaccca gattgggtta
     3961 ttaaatcagc gtccaaataa gcctaaatgg cagctaagta tccaaacgca taaaattgtg
     4021 gggattgaat aagtagaagt tagaagatga tttgtaaaag atcagacttg atctgacaat
     4081 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtccaaa
//
LOCUS       DANLTI010000172         4100 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.174, whole genome shotgun sequence.
ACCESSION   DANLTI010000172 DANLTI010000000
VERSION     DANLTI010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4100
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.174"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..154)
                     /locus_tag="PXB09_002509"
     CDS             complement(<1..154)
                     /locus_tag="PXB09_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5234565.1"
                     /translation="MRKSRLSQYKQNKLIEQFVAGVTARTASELVNVNKNTAAYYFHR
                     LRLLIYQ"
     gene            483..1841
                     /gene="mnmE"
                     /locus_tag="PXB09_002510"
     CDS             483..1841
                     /gene="mnmE"
                     /locus_tag="PXB09_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDL5234566.1"
                     /translation="MKDTIVAQATPIGRGGVGILRVSGPLAETVAQAVLGKTLPPRIA
                     NYLPFKDEDGTVLDQGIALFFKAPNSFTGEDVLELQGHGGQVILDLLLKRILQVKGLR
                     IARAGEFSEQAFLNDKLDLAQAEAIADLIDATSEQAARSALKSLQGEFSNKINALVDS
                     VIYLRTYVEAAIDFPDEEIDFLADGKIEAKLNEIIAQLDGVRREAKQGSILREGMKVV
                     IAGRPNAGKSSLLNALAGREAAIVTNIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS
                     DEVERIGIQRAWEEIAQADHVLLMIDSTEQQADQFRQEWAEFLAKLPANMPVTVIRNK
                     VDLSGEQEGLIQVDDFTMIRLSAQTKVGVDLLREHLKKSMGYQSSTEGGFLARRRHLQ
                     ALETAAEHLERGHIQLTQFLAGELLAEELRMVQNALSEITGQFTSDDLLGNIFSSFCI
                     GK"
     gene            1842..3107
                     /gene="tilS"
                     /locus_tag="PXB09_002511"
     CDS             1842..3107
                     /gene="tilS"
                     /locus_tag="PXB09_002511"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDL5234567.1"
                     /translation="MALFNRFQTQCATHLPNQTAFLIGLSGGVDSVVLLHLFARTSFH
                     VRAIYVHHGLSPNADDWAAFCEQYCKRLNIPFILQKVRVDSSNGVENGAREARYQAIQ
                     QQLKPNEVFATAHHLDDQAETFLLALKRGSGVKGLSAMQAVTFLQNFTVFRPLLTFTK
                     SDLMGYAVQHQLGWIEDESNADNRYDRNFLRNSILPLLNQRWQHFSQMVARSAQHCAE
                     QQALIEELLSNELKSRTGEKQQLNINGFGQFSLAKQQQLSRLWLEQNGVRMPSQAQLQ
                     AVISELIFAKADKNPQVKVGENIIRRYQQAIYVTEEIADIPPFEVVLPTETKVELPYQ
                     LGTIIRQQQEIICKKNGKNHRLQLPQELAQSTISIKIGQLGKVKCYGKAQREEMKKIW
                     QNHGIPVWERNRTPLIFWQDELVGLLPIL"
     gene            complement(3097..3990)
                     /gene="xerD"
                     /locus_tag="PXB09_002512"
     CDS             complement(3097..3990)
                     /gene="xerD"
                     /locus_tag="PXB09_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDL5234568.1"
                     /translation="MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPK
                     AFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRKFFRFLCLEHYRQDDPTLTLSSP
                     KRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
                     LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMT
                     RQTFWHRIKHYAVLAGIDADKLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQ
                     IYTQVAKARLKSLHQQFHPRG"
BASE COUNT         1191 a          948 c          927 g         1034 t
ORIGIN      
        1 gttgatagat aagcaaccgc aagcgatgga agtaatacgc cgccgtgttt ttgtttacat
       61 tgaccaactc agatgctgtt cgggctgtta cccctgcaac aaactgctca atgagtttgt
      121 tttgtttgta ctgacttaga cgactttttc tcatttgggt atcttaacct aaatggagtt
      181 tttagtcgtt atctaggaca gccccaaaga aaaacacgct ttgcattgaa aaaaaggcgg
      241 tggtggaaat aaaacggcgt aggagtaata gtttttctaa agacattcag aatggttgaa
      301 ttggttaaat aaagagcggt tattctacct tttaagtcaa ccccaatcaa tcggcttttg
      361 ttttaccttt ggcgtgggtt tcggtatgat aagcgatatg tagtggcggg tcctgtgccc
      421 gcctaaatac caatgataac ttgcgggcga gcacaggact cgcccctacg ataaacaaga
      481 aaatgaaaga caccattgtt gctcaagcaa caccgattgg cagaggcggt gtggggattc
      541 tgcgagtttc cggtccgctt gccgaaaccg ttgctcaagc cgtattaggc aaaacattgc
      601 caccccgtat cgcaaattat ttgccgttta aagacgaaga tggcactgtg ttggatcaag
      661 gcatcgcctt attttttaaa gctcccaact cctttaccgg cgaagatgtg cttgaacttc
      721 aaggacacgg tgggcaggtt attttagatt tactgctcaa acgcatttta caagttaagg
      781 ggctacgcat tgcccgagca ggtgaatttt ccgaacaggc atttttaaac gataagctcg
      841 accttgccca agctgaagcg attgcggatt taatcgacgc caccagcgag caagccgctc
      901 gttcagccct gaaatcacta cagggtgaat tttctaataa aatcaatgcg ttagttgatt
      961 cagtaattta tttacgcact tatgtggaag cggcgattga cttccccgat gaggaaattg
     1021 actttctggc agacggtaaa atcgaggcaa aattaaatga gattatcgct caattagacg
     1081 gtgttcgccg tgaagcgaaa caaggctcga ttctgcgtga aggaatgaaa gtagtgatcg
     1141 ccggtcgccc gaatgcaggg aaatcaagct tgcttaacgc cttagccgga cgagaggcgg
     1201 cgattgtaac caatattgct ggcacaaccc gtgatgtgtt gcgtgaacat attcacattg
     1261 acggaatgcc gttgcatatt atcgacaccg ccggtctccg tgatgccagt gatgaggtgg
     1321 aacgtatcgg cattcagcgt gcttgggaag aaatcgccca agccgaccac gttttattaa
     1381 tgattgacag caccgagcaa caagccgatc agttccgaca agagtgggcg gaatttctag
     1441 ccaaactgcc ggcaaatatg cctgtgaccg taattcgcaa caaagtcgat ttatccggcg
     1501 agcaggaagg cttaattcag gtggacgatt tcacgatgat tcgcctctct gcccaaacca
     1561 aagtcggcgt tgatttattg cgtgaacact tgaagaaatc aatgggctac caaagttcta
     1621 cggaaggcgg attcttggct cgccgccgtc atctgcaagc attggaaacc gctgccgagc
     1681 atttagagcg agggcatatc cagcttactc aattcttagc cggcgaattg ttagcggaag
     1741 agttgcgtat ggtgcaaaat gccttaagtg aaattaccgg ccagttcacc tctgatgact
     1801 tattaggcaa cattttcagc tcattttgca tcggtaaata aatggcactt tttaaccgct
     1861 ttcaaaccca gtgtgcaacg catttgccga accaaaccgc ctttttaatc ggcttaagcg
     1921 gtggggtgga ttcggtggta ctactccacc tttttgcccg cacctcattt cacgttaggg
     1981 caatttatgt ccaccacggg ctaagcccaa atgcggacga ctgggcagcc ttttgcgaac
     2041 aatattgcaa gcggttaaat attcccttta ttttacaaaa ggtcagagtg gatagctcaa
     2101 acggcgttga aaacggggcg agagaagctc gttaccaagc cattcaacaa cagcttaagc
     2161 ccaatgaagt gttcgccacc gcccaccatt tagatgacca agccgaaact tttttgctcg
     2221 ccctcaagcg aggcagtgga gtcaaaggat tatcggcgat gcaagcggtc acttttttgc
     2281 aaaattttac cgtttttcga ccgctactca cttttactaa gtcagatttg atgggttatg
     2341 ccgttcaaca tcagctaggt tggattgagg acgaaagcaa tgccgataac cgttacgacc
     2401 gtaatttcct tcgcaatagc atcttgccac tactcaatca acgttggcag cacttcagcc
     2461 aaatggttgc ccgttccgct cagcattgtg cagaacagca agccttgata gaagagctat
     2521 taagcaatga actcaagtca agaacagggg aaaaacaaca actcaacatt aacggctttg
     2581 ggcaattttc acttgccaag caacagcaac ttagccgcct ttggctggaa caaaacggag
     2641 tgagaatgcc aagccaagcc cagctacaag cggtcatttc tgaactgatt tttgcaaaag
     2701 ccgataaaaa cccacaggtt aaagtcggcg aaaatattat cagacgctat caacaagcta
     2761 tttacgttac cgaagagatc gccgacattc cgccgtttga ggtagtactt cccacagaaa
     2821 ccaaagtgga attaccctat cagctcggta ctattattcg ccaacaacaa gagatcattt
     2881 gcaaaaaaaa cgggaaaaat caccgcttgc aactgcccca agagctggct caatcaacta
     2941 tttctattaa aatcgggcaa ctaggcaaag taaaatgcta cggcaaggct caacgggaag
     3001 aaatgaaaaa gatttggcaa aatcacggca tacctgtttg ggaacgcaac cgtacaccgc
     3061 tgattttttg gcaagacgaa ttagttggcc tattacctat cctctagggt gaaattgctg
     3121 atgaagcgat ttcaaacggg cttttgccac ttgagtgtaa atctgggtgg tcgataaatc
     3181 actatgcccc agcaacatct gtaccactcg caaatcagcc ccatgattga ccaaatgggt
     3241 cgcaaaggcg tggcgaagca cgtgaggcga gagtttatct gcatcaatac ctgcaagcac
     3301 ggcatagtgc ttaatccgat gccaaaacgt ctgccttgtc atctgctgac ctcgccggct
     3361 cggaaataca acatcagact gctgattatt cagcaaaata gggcgaccgt actggaaaaa
     3421 ctcctgtatc caataattcg cctcctcgcc caatggcact aaccgctctt tatccccttt
     3481 accgataatt ctcaccaccc cttgtttgag gctgatatta tccatcgaaa gcgacaccag
     3541 ctccgttacc cgcagaccgg tggcatacag cagctccagc attgctttat cccgtaactc
     3601 tatcggatct aacgtattcg gggcatctag caaatccatt acctgatctt cacttaagga
     3661 tttgggtaaa gaagcacccc gtttagggga agaaagggtt aaagtcgggt catcttggcg
     3721 ataatgctca aggcataaaa aacggaaaaa tttccttaaa caactcaaca ttctggcaga
     3781 gcttgtcgcc ttatagcctt gctccaaacg ctcgccgaga aaaccttgta agtcgatatg
     3841 atcgagagac agaaatgctt taggttcaga aaaataatcg gaaaaacgct ctaagtcaga
     3901 acgataagag gcaacggtat tttcagacaa accgtgttct tgccatagtg tatcgagaaa
     3961 ttgttcaata atagggtcaa gctcagccat acaagcgggt atattttcag gaaattttgc
     4021 aaattttaac agaattaaat ctataaaaat acaaaagcga tagaaacgaa aaaaccgatt
     4081 agcttatgct aatcggttta
//
LOCUS       DANLTI010000173         4084 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.175, whole genome shotgun sequence.
ACCESSION   DANLTI010000173 DANLTI010000000
VERSION     DANLTI010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.175"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            33..1508
                     /gene="mepM"
                     /locus_tag="PXB09_002513"
     CDS             33..1508
                     /gene="mepM"
                     /locus_tag="PXB09_002513"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDL5234569.1"
                     /translation="MAVFLLAVFSLFVDIVLALKDQSSINNTSSQEDIIAIDKQEKYQ
                     SINTNLAENNTLHQEQHSSFINYVTDLLTQSALVIEHDDEIVDDQTATSYEDELVGQD
                     DEVEEGIETVENQVPGEKLPEEAEKALEDLLDVADQALRIQNQFSYTVARGDKLKDVL
                     EQSGLTASVAKNLIKQHSALAQLEPGQQFYWVLDNDGELEYMNWLVSEKEERVYERKE
                     NGKFSFQRFEKKGEWKLDVVRGTIQNSFAVSLKAVGLSDRQINQLAVGLQSQIATNKL
                     KKGDRFAILIKREYIDGKVTDLGNVEGIHVISSKKSYYAIQADNGRYYSRYGETLSGG
                     FARHPLLFAARVTSSFNPKRRHPITGRISPHKGVDYGVPIGTPIIAPSDGVVEHVAYQ
                     ARGAGRYIRIKHGHITTVYMHLSKTLVKPGQSVKKGERIALSGNTGGSTGPHLHYEFH
                     INGRPVNPITVKLPGSNSGMGNKERQAFLNKAKNVESRLKM"
     gene            1518..2201
                     /gene="dsbC"
                     /locus_tag="PXB09_002514"
     CDS             1518..2201
                     /gene="dsbC"
                     /locus_tag="PXB09_002514"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDL5234570.1"
                     /translation="MKKNLITLGLMCLSTITFASDAKLKSQLEKIGATDVKISDSPLT
                     GFKMATSNEGVVYISQDGRYVIQGKVFELKNGKAIDITNQGLLAELNSYTNEMIVYPA
                     KNEKHVITVFMDITCHYCHLLHTKIKEYNDLGITIRYLAFPRGGMNTQTAKQMEAIWT
                     SADKVKALNDAEDGKLPTQIKTPDIVKKHYQLGIKFGVTGTPNMVTSEGELIGGYVEP
                     KELAKMLSE"
     gene            2286..4007
                     /gene="recJ"
                     /locus_tag="PXB09_002515"
     CDS             2286..4007
                     /gene="recJ"
                     /locus_tag="PXB09_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDL5234571.1"
                     /translation="MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNL
                     HRPQQLANIEQAVDLLLQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYL
                     IPDRFSQGYGLSVAVAEMVLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLP
                     PESLPNADALVNPNLAFCEFPSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAE
                     LLDLVALGTVADVVPLDQNNRILVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAAD
                     LGFAIAPRLNAAGRLENMSLGVELLICENMELARRLALDLDSLNQTRKEFEQEMKAEA
                     LSICANLPSLAQSEQAHGIVLYQADWHQGVIGILASRIKDQFNRPVIAFAQESEESEY
                     LKGSARSINGVHMRDLLEHIDMRHPDLIEKFGGHAMAAGLTIHQSKLDLFKQIFDQSI
                     NAIIEPEQLQGIIYTDGELNALEFTLANAEMIRQGGPWGQHFPEPSFEGEFSILQQKL
                     LAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPDLSIKKARLVYRLDINEFRGEKSLQLK
                     VEYLKYI"
BASE COUNT         1369 a          649 c          891 g         1175 t
ORIGIN      
        1 gagatcgtaa gcgacataaa aaacatttta agattgcggt tttcttatta gcggtattta
       61 gtctatttgt tgatattgtt ctcgcactaa aagatcaatc ctcaatcaat aatacatctt
      121 cacaggaaga tattattgcc attgataaac aggaaaaata tcagagtatc aacactaatt
      181 tggcggaaaa taatactctc catcaggagc aacattccag ttttattaat tatgtgactg
      241 atttactgac tcagtcggca ttagtaatcg aacatgacga cgaaattgtt gatgatcaaa
      301 cagcgacttc ttatgaagat gaattagttg ggcaagacga tgaagtagaa gaagggattg
      361 aaacggttga aaatcaagtt cctggggaaa aactcccaga agaagctgaa aaggcattag
      421 aagatttact tgatgtggct gatcaagcac tacgaattca aaaccaattc agttataccg
      481 tagctcgagg tgataaactt aaagatgtat tagagcaatc aggcttaact gcatccgttg
      541 cgaaaaattt aattaagcaa cattcggcat tagcacaatt agaaccgggt caacaatttt
      601 attgggtatt agataatgac ggtgaattag aatatatgaa ctggctggtt tccgaaaaag
      661 aggaacgggt ttatgagcga aaagaaaatg gtaaattttc ttttcaaaga tttgagaaaa
      721 aaggggaatg gaagttagat gttgtaagag gaactattca gaatagtttt gcggttagct
      781 taaaagccgt tggcttatca gaccgccaaa ttaaccagct agcggttgga ttgcagtcac
      841 aaattgcgac gaataaatta aaaaaagggg ataggtttgc aattctgatt aagcgggaat
      901 atattgacgg caaagtaacg gatttaggaa atgtggaagg aatccatgta attagcagta
      961 aaaaaagtta ttatgctatt caagcagata atggacgcta ttatagtcga tatggtgaaa
     1021 cattaagtgg aggatttgct cgtcatccat tattatttgc agcaagagta acttcttctt
     1081 tcaaccccaa acgcagacac cctattacag ggagaattag tccgcataaa ggggttgact
     1141 atggcgtgcc aataggtact ccgatcatcg caccaagtga tggtgtcgta gagcatgtgg
     1201 catatcaagc ccgtggagca ggacgttata ttcggataaa acacggacat attacgactg
     1261 tttatatgca cctcagcaaa acgttggtaa aaccagggca gagtgttaaa aaaggggagc
     1321 ggatagcatt atcgggtaat acaggcggtt caaccgggcc tcatttacac tatgaattcc
     1381 atattaatgg tcgaccggtc aacccgatta cggtaaaatt gcctggctca aattcaggta
     1441 tgggtaataa agaacgtcaa gcattcttaa ataaagcgaa gaatgtagaa agtagattaa
     1501 aaatgtaagg attctcaatg aaaaaaaatc taatcacttt aggattaatg tgtttatcaa
     1561 ccatcacgtt tgcttcagat gcaaaactaa aaagccagct tgaaaaaatt ggagccacag
     1621 atgttaaaat ttcagattct ccattaacag gctttaaaat ggcgacttca aatgaaggtg
     1681 ttgtatatat cagccaagac ggtcgttatg taattcaagg taaagtattt gagctaaaaa
     1741 atggtaaagc gattgatatt actaatcaag gattgttggc agaattgaat tcatacacta
     1801 atgaaatgat cgtatatcca gcgaaaaatg agaaacatgt gattacggtg tttatggata
     1861 ttacttgcca ttattgccat ttactacata ctaaaatcaa agaatataat gatttaggta
     1921 ttaccattcg ctatttggca ttcccgcgtg gtggaatgaa tacccaaaca gcaaaacaaa
     1981 tggaagctat ttggacatca gcagacaaag taaaagcact gaatgatgct gaagatggta
     2041 aattaccaac ccaaataaaa acgccggata ttgtgaaaaa acattaccaa ttagggatta
     2101 aatttggtgt gacaggtacc ccaaatatgg taacttcaga aggtgagttg attggtggtt
     2161 atgtagagcc taaagaatta gcgaaaatgt taagtgagta attcattaac ttgaatacaa
     2221 gcggtctttt tttgtaaaat ttttgcaaaa gaagaccgct tgttgtttca ttaaagaaga
     2281 gtattgtgga aaaaataatt aaaaggcgcc cattattaac aacggaaata gtctctacaa
     2341 acccgttatt aaatcgaatc tatcaaagtc gaggcataaa gaatacgcaa gaactagagc
     2401 ataatttaaa gaatttgcat agaccacagc aacttgccaa tattgagcaa gccgttgact
     2461 tgctattaca agcctttcgt gaaaaaagcc ggatcattat tgtgggtgat tttgatgcag
     2521 atggtgcaac cagtacatcg cttgccctta ttgcgttacg ccaattgggt ttcgataagg
     2581 tagattattt aattccggat cgtttttctc aggggtacgg attgagtgta gcggttgctg
     2641 aaatggtatt agcaaaaggg gcggatttag tcttaacggt agataatgga atttcttcga
     2701 ctgaaggcat tgctctgcta aaaagccatc agattcaagt tttggttacc gatcatcatt
     2761 taccgccaga gagcctaccc aatgcagatg cactggtaaa ccccaattta gctttttgtg
     2821 aatttccgtc taaatcttta gccggggtag gcgtgatctt ctatgtaatg atggcattgc
     2881 gttctcgtat gagagaacaa catttatttg aaaataaacc agagccaaat tttgctgaat
     2941 tactggattt agtcgcttta ggcacagtgg ctgatgtagt gccgttagat caaaataatc
     3001 ggatattggt gcatcaaggg ttacagcgaa tccgttcagg gcattgccgt ttagggataa
     3061 aagctttagc ggaggtgggc aagcgagatc tttctacttt gcaagcagca gatttgggtt
     3121 ttgctatcgc accacgtttg aatgcagctg gtcggttaga aaatatgtct ttaggggttg
     3181 agttactaat ttgtgaaaat atggaattag ctcgccggct tgcgcttgat cttgattctc
     3241 ttaatcaaac ccgaaaagag tttgaacaag aaatgaaagc agaagcactg tcgatttgtg
     3301 cgaatttgcc aagtcttgcg cagtctgaac aggcacacgg aatagtgtta tatcaagcag
     3361 attggcacca aggtgtaatt gggatcttag cttctcgcat taaagatcaa tttaaccgtc
     3421 ctgtcattgc ttttgcacaa gaaagtgagg aaagtgaata tctaaaaggt tctgctcgct
     3481 cgatcaacgg agtacatatg cgagatttac tggaacatat cgatatgcga catccagact
     3541 tgattgaaaa atttggtgga cacgcaatgg cggctggttt gactatccat caatcaaaat
     3601 tagatttatt taaacagata tttgaccaat ctattaatgc aattatcgag cctgagcaat
     3661 tacaaggcat catttatacc gatggtgagt taaatgcact agagtttact ttagccaatg
     3721 ccgagatgat taggcaaggt gggccttggg gacaacattt tccagaacct agttttgaag
     3781 gggagtttag cattctccaa caaaaattac tcgcaggtaa acatttaaaa ttaatgttgc
     3841 aatcagagaa agggcaacta tttgatgcaa tttggtttaa tgtggatgta agggcgtttc
     3901 ctgacttatc gatcaaaaag gcaagattag tttataggtt ggatattaat gaatttcgag
     3961 gagagaaatc tttgcaatta aaagtggagt atcttaaata tatttgaaat gttattttat
     4021 gtaaatttaa tagaattaat tatatttgta ttgtagaatc cgtccgaatg caactttaat
     4081 aggt
//
LOCUS       DANLTI010000174         4068 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.176, whole genome shotgun sequence.
ACCESSION   DANLTI010000174 DANLTI010000000
VERSION     DANLTI010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4068
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.176"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            147..452
                     /gene="cyaY"
                     /locus_tag="PXB09_002516"
     CDS             147..452
                     /gene="cyaY"
                     /locus_tag="PXB09_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDL5234572.1"
                     /translation="MNTAQFHQAVEQVWQQIEEKIYDEGLSVDTEIQGAVCTLTFDDE
                     SQVIINKQEAMLELWLASKLGGFHFKNVEGEWVTDEGRSFWQHLEEAFARHGESVSF"
     gene            561..2360
                     /gene="recQ"
                     /locus_tag="PXB09_002517"
     CDS             561..2360
                     /gene="recQ"
                     /locus_tag="PXB09_002517"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDL5234573.1"
                     /translation="MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGG
                     KSLCYQVPALCLDGITLVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQK
                     ALSGQLKLLYLSPEKVMTQGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGL
                     RNTFPNVPLMALTATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQ
                     LIKFISKQQGKSGIVYCNSRNKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQR
                     DDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDP
                     SDYAWLQKILLEEPESEQRNIKQHKLQAIGDFAESQTCRRLVLLNYFGEHRQEQCKNC
                     DICLDPPQQYDGLLDAQKVMSVIYRTGQIFGQHHIIAVLRGMNNLKIREHQHDQLSVY
                     GIGKEQSQHYWQNVVRQLIHLGLIIQNIANHSALQLTESARPFLRGEKQLQLALPRLG
                     ISATAFVQKQASHRYDKDLFARLRFLRKQIADLENIPPYIVFNDATLQEMAEFLPTSK
                     VEMLEINGVGERKFERFGQAFMSLIKEYQNNRK"
     gene            2519..3061
                     /gene="infC"
                     /locus_tag="PXB09_002518"
     CDS             2519..3061
                     /gene="infC"
                     /locus_tag="PXB09_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015871208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDL5234574.1"
                     /translation="MKPVKRVQSNRAHRLNDEIRGVKEVRLTDENGEQVGIVSLQDAL
                     NRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPG
                     TDDGDYQVKLRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVE
                     SAPGKLEGRQVVMVIAPKKK"
     gene            3325..3522
                     /gene="rpmI"
                     /locus_tag="PXB09_002519"
     CDS             3325..3522
                     /gene="rpmI"
                     /locus_tag="PXB09_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDL5234575.1"
                     /translation="MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQL
                     RHKSMVAKADQVLVVACLPYA"
     gene            3631..3984
                     /gene="rplT"
                     /locus_tag="PXB09_002520"
     CDS             3631..3984
                     /gene="rplT"
                     /locus_tag="PXB09_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009635878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDL5234576.1"
                     /translation="MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVVKAAQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFAALVEKAKSAL"
BASE COUNT         1350 a          796 c          805 g         1117 t
ORIGIN      
        1 taatgaggat aaaataaaaa atcaagctaa acttaaaaag cctaattatt tcttaacaaa
       61 aatacaaaaa gaactttaca gaccatttaa acagctaaaa caaaaagtat ttactactta
      121 tataacattc aaataaggat acaccaatga acacagcaca attccaccaa gccgtagagc
      181 aagtatggca acaaattgaa gaaaaaattt atgacgaagg attatcagtc gatactgaaa
      241 tccaaggagc ggtctgcacc ttaacctttg atgatgaatc gcaagttatc attaataaac
      301 aagaggcaat gctggaatta tggcttgcca gcaaattggg tggtttccac tttaaaaatg
      361 tagaaggcga atgggtaaca gatgaaggtc gctcgttctg gcaacattta gaagaagctt
      421 ttgctcgaca cggagaaagc gtttctttct aatgcctaat tgttaactaa gacagcactc
      481 gtctttgatg agtgctttat tttcatttta aaagatactc tcagaagacg agtactatca
      541 taagtagcaa ccaactacca atgaacacca ccgcaatttc tgttttaaat aatatttttg
      601 gctatcaaaa attccgagac gggcaagaag aagttatcaa tgccgtgttg gaaaatcgtg
      661 attgcctcgt gattatgaca acaggcggtg gcaaatccct ttgctaccaa gtgccggctt
      721 tgtgcctaga cggcatcact ttggtgattt cgccgcttat ttcgttgatg aaagaccagg
      781 tggatcaact tatcaccaac ggcattgaag cagcttatct taactccact caaacgctcg
      841 aagagcagca acttgtggaa caaaaagcct tatccggtca attaaaatta ctctatcttt
      901 cccctgaaaa ggtaatgact caaggctttt tccactttat ttcgctatgt aaaatcagct
      961 ttattgcggt tgatgaagcc cattgtgttt cccaatgggg gcacgatttc cgccctgaat
     1021 ataccctgct aggtggctta cgaaacactt tcccgaatgt gccgttgatg gcactcaccg
     1081 ccacggcaga tctaacaacc cgctccgata ttctgcatca tttacgctta aatagcccac
     1141 atatctattt aggcagcttt gatcgcccca atattcgcta caccgtgcag gaaaaattta
     1201 aaccgcttga acagctcatt aaattcatca gcaaacagca aggcaaaagc ggtattgttt
     1261 actgcaacag tcgcaacaaa gtggaagaaa tcaccgagaa actctcagcc cgtaaaatca
     1321 gcgtgatggg ctatcacgcc ggtatgagtt ttgaacagag agaacgagtg cagaatgcct
     1381 ttcagcgtga tgatattcaa attgtggttg ccactattgc gtttggtatg gggatcaaca
     1441 aatccaacgt acgttttgtg gtacatttcg atttacctcg ctctatcgaa tcttactatc
     1501 aagaaaccgg acgagccggg cgagatgatc tcccttctga agccgtgctt ttttatgatc
     1561 ctagcgatta tgcttggtta caaaaaatat tattggaaga gccggaaagc gaacagagaa
     1621 atattaaaca gcataaatta caggcaattg gcgatttcgc cgaatcacag acttgccgcc
     1681 gtttagtctt actcaactac tttggggaac atcgccaaga gcaatgcaaa aactgcgata
     1741 tttgtttaga tccaccgcaa caatacgatg gcttacttga tgcccaaaaa gtgatgtcgg
     1801 tgatttaccg caccggtcaa attttcggtc agcaccatat tattgcggta ttgcgaggaa
     1861 tgaacaatct caaaattcgt gaacatcaac acgatcaact ttccgtttat ggtatcggaa
     1921 aagaacaaag ccaacattat tggcaaaatg tggtgcggca actgattcat ttagggttga
     1981 ttattcaaaa tattgctaac cattccgctc tgcaattaac cgaaagtgcc agaccatttt
     2041 tgcgtggaga aaagcaactt cagcttgcat tgccacgttt aggtatatct gcgactgcat
     2101 ttgtgcaaaa acaagcaagt catcgctatg acaaagacct attcgcacgc ttacgttttt
     2161 tacgcaagca gatagctgac ctcgaaaata ttccacctta tatcgtcttt aacgatgcca
     2221 ccttgcaaga aatggcagaa tttctcccga cttcaaaagt ggaaatgtta gaaattaatg
     2281 gtgttggtga acgaaaattt gaacgatttg ggcaagcatt tatgagttta atcaaagaat
     2341 atcaaaataa ccgaaaatag gcagttaaat aagggcttta ttattgcata agcactgaaa
     2401 atcttataga atccgcacgt ttagctgttt tttaatcact taaaacaagc aatctaaaat
     2461 atttatacgc tctcaagcgg taaaatttaa gcaaaaattt actagaagga ataaggctat
     2521 taaacctgta aaacgtgttc aatcaaatcg tgcacatcgt cttaatgacg aaattcgtgg
     2581 cgtaaaagaa gttcgcttaa ccgatgaaaa cggcgaacaa gttggtattg tatcacttca
     2641 agatgctcta aatagagcag aagaagctga attggattta gtggaaatca gcccaaatgc
     2701 tgaaccacca gtttgtcgta ttatgaacta tggtaagttc atctacgaaa aagagaaagc
     2761 agcaaaagaa caaaagaaaa aacaaaaagt tgttcaagtt aaagagatca aattccgtcc
     2821 gggaactgat gatggcgatt atcaagttaa acttcgtagc attatccgtt tcttagaaga
     2881 tggggataaa gtaaaaatca cagtgcgttt ccgtggtcgt gaaatggctc accaagaaat
     2941 cggtatggac gttttagaac gtgtcaaagc agatactgca gaaattgcaa tggtagagtc
     3001 agccccaggc aaattggaag gtcgccaagt tgtgatggtg atcgcaccta agaagaaata
     3061 atttcgataa gcacattgtt ttaatgtgct tttttcttga taaagcttaa attggcttgc
     3121 atagcggtta tattttcgct aaaattcgca agcttttttg cctagccaag aaagagaaaa
     3181 tgctcaacag gcaaactcag cagcctgctt gactttttaa cgatgaaaat cgtatagcgg
     3241 agaataagtg cttccaagta attttgttca caaaattcgc cttattttca taatatctaa
     3301 caaacaatgc ggagtttttt aacaatgcct aaaattaaaa cagtacgtgg tgctgctaag
     3361 cgtttcaaaa aaacagcttc cggcggtttt aaacgtaaac aatctcactt acgtcacatt
     3421 ttgactaaga aaaccactaa acgtaaacgt caattacgtc acaaatcaat ggtagcgaaa
     3481 gctgaccaag ttttagtagt agcgtgctta ccatacgcat aagcctttta ggttagcgta
     3541 gtgtagtaaa gtacggacgt acggatagaa ttcttagtaa aggtcgtgat gacgaccacc
     3601 aatcaaaata gacaattagg agattaaata atggctcgtg taaaacgtgg tgttattgca
     3661 agagcacgcc ataagaaagt tcttaaggct gctaaaggtt attatggtgc acgttcacgc
     3721 gtgtatcgcg ttgctttcca agcagtagtt aaagctgctc aatatgctta ccgtgaccgc
     3781 cgtcaacgta aacgtcaatt ccgtcaatta tggattgctc gtattaacgc agcagctcgt
     3841 caaaacggtt tatcttacag caaattcatc aacggcttga aaaaagcatc tgttgaaatc
     3901 gaccgtaaga tcttagctga catcgcagta tttgacaaag ttgctttcgc agctttagtt
     3961 gaaaaagcaa aatctgctct ttaattttaa agaatagaaa tgaggacgcc tagtgcgtcc
     4021 ttttttatgg ataaaataat ctttttaaga attaatagca aaataagc
//
LOCUS       DANLTI010000175         3942 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.177, whole genome shotgun sequence.
ACCESSION   DANLTI010000175 DANLTI010000000
VERSION     DANLTI010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.177"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            10..2085
                     /locus_tag="PXB09_002521"
                     /pseudo
     CDS             10..2085
                     /locus_tag="PXB09_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            2129..3565
                     /locus_tag="PXB09_002522"
     CDS             2129..3565
                     /locus_tag="PXB09_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3327 domain-containing protein"
                     /protein_id="HDL5234577.1"
                     /translation="MKKTTACILTFLVSSVLYANNITIELKQNDFVQGKLIQKAQQPL
                     SLSIIFPDQSSRLLAQNVFGEQDFMFKSELIGTATFSILANGATVSDQDFTLTIERHI
                     PISAQIAPPKVIENTQLEELSQKIAKNPEKQTALINDFWDKAKQAGTPLIEPLDEQQS
                     RVTFLWRGATKNARIWGGVSTEHDFMQRFGETDIWYKSYIVPNDTLVEYKLAPDVPTL
                     PVDENTQRRALLATAQADPLNKTAYFEKIGQNIHNTDKFNYASLLKLPNAPTQSFLTE
                     APNIAKGKLQQLIFESATLGNKHRLFVYLPDGFSAEKNYAVLYLFDGVEYTERVPTKT
                     ILDNMIAQKVILPTVAVFIENPSSESRRVELPANPIFTQVLAKELVPFVEKQLNIKTK
                     ERIIGGSSYGGLSSAYTVLNYPNVFSKALILSGSFWWQPKGTPSEQSHYIAQQFIQKE
                     KLPLCFFISAGFYESGKSAICKRSNYFA"
     gene            complement(3707..3886)
                     /locus_tag="PXB09_002523"
                     /pseudo
     CDS             complement(3707..3886)
                     /locus_tag="PXB09_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011625997.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
BASE COUNT         1293 a          792 c          735 g         1122 t
ORIGIN      
        1 gataaactaa tgaaaataaa aaaatattca ctttctctaa tcactttagc gattgtagct
       61 cctcaagtat tagcagaaac aacctctcaa gcagaactaa atgctattga ggtcaaagag
      121 aaattggcag ctaccaccgg ctatattcct gtttatacga ctgtaggaac gaaaacatta
      181 acctctttgg ctcgtacacc ttttagtatc aatgttgtct ctgatgattt aatgcatgac
      241 caagctgttc gttctgttac cgattcagtg gcttatacct ccggtatgat gggtggctat
      301 cgtggtaaca attcgcttat cgaaatctcc attcgaggca ttggcaataa aagtgatggc
      361 agtacaattc cgacctattt aaacggttct cgctaccaaa ctgcatttga aatcgatccg
      421 ttcttcttag aaagtatcaa tgtgattaaa ggtccaaact ccattttata cgggcaagct
      481 aatcccggtg gcgtaatgga tattatcacc aaaaaagccg gcagtaaccc acatcgccat
      541 ttgcaatttg tggtgggaaa ccatcaacga taccaaatcg ggctggatat tgaagaaaat
      601 ctctccaata ccttatccgc tcgtttaatc ggtcaattag aacgaacaaa ctggaatacc
      661 taatttgtaa aagaaaaagg cggtgctttt gctccaagca ttttatggaa accgactaca
      721 aatacagaac ttaatgttta cgcttactat gcaaaaaaac cgaaagccgg tgatcgtaac
      781 tttttaccga aagaaggaac gattaatagc gtaaacggga aggaactacc ctatgatatg
      841 ttcctcagcg atctgaacta tcacggttta aaagccgaac aaatgcaagt aggttacagt
      901 ttctcacata aatttacgcc aaacctaacg ttccgccaaa atgcaagtta ccataatggc
      961 gaagagaatt tcaaaaatct agtttattgg ggcgatgtcg gttcggtttt agaacgtaga
     1021 gctcgccatt gggatgtcaa aacccaagaa atcaacttag ataaccaatt agaatgggta
     1081 tttagcacag caaatataaa tcataccttg ttagccggta ttgattataa acgagtgcgt
     1141 aaagatcttg ataactatat ggggattgcc cctgattttg attggcagaa ccctgtttat
     1201 ggcgtgaccg ttactgagcc tagcttattt tcaagtgaag tgaagcattt aaaacaactt
     1261 ggggtttatc tacaagatca aatagaaatc ggtaattttg acttcctgtt aggcggtcgt
     1321 tacgatcgag caaaaaacag caaccaagat cgtttgaaca gtaaaacaga gaataaccaa
     1381 gaaggaaaat ttacttggcg tacaggcgta gtttacaact ttgaaaacgg tatcgctccg
     1441 tatatcagct acagcacttc ttttgtgcca tcggctgaaa aagatgctca aggaaatttc
     1501 ttaaaaccaa caactgctgg gcaatgggaa gtgggaatga aataccaacc tacccaagac
     1561 accttactga ccttagcagg atttaaaatt acacaaaaag atttagccaa ttatcaatgg
     1621 caaacccgct cttatgagca aattggtgaa gtgcaaacca aaggaattga agtgagttta
     1681 aatcagcaat tatccgataa attttcaata gcggcttctt atgcttactt aaaaaaagag
     1741 attactgcag ataaagatgg cacgacgatt ggaaaaacgc agtggggagt gcctcgccat
     1801 caagcatctc tttgggcaaa atataaattc tttgataagc tgaccgccgg tgtaggtgta
     1861 cgctatatgg gaacgacttt tggcgataac caaaatactt ttaccgtacc ggcatacaca
     1921 ctttacgata tgatgctagc ttatgatttt atgcctaact taaacttaca gctcaacgca
     1981 caaaacctga cgaataaaaa atatgtcgca agctgtgcca ataatttttc ctgtttctat
     2041 ggaaaagatc gcaatttaag tgcaacgtta aactatcatt tttaatctca acagccctca
     2101 aatgagggct taaacttttg caaaaaatat gaaaaaaacg accgcttgta ttcttacttt
     2161 tttggtttca tctgtgcttt atgctaacaa tataaccatt gagcttaaac agaatgattt
     2221 tgtgcaaggc aaattgattc agaaggctca acagccactt tccttgtcga ttatttttcc
     2281 tgaccaaagc tctcgcctgc tggctcaaaa tgtctttggt gaacaagatt ttatgtttaa
     2341 atcagaacta atcggcacag ctactttttc tattctagcg aatggtgcaa ccgtttcaga
     2401 ccaagatttt accttaacga ttgagcggca tattccaatc tcggcacaaa ttgctccacc
     2461 taaagtaatt gaaaatacac agcttgaaga actcagccaa aaaattgcaa aaaatccaga
     2521 aaaacagacc gctttaatta acgatttttg ggataaagca aaacaagccg gcacaccatt
     2581 gattgaacca ttggacgaac agcaaagccg tgtaactttt ttatggcgtg gagcaacgaa
     2641 aaatgcccgt atttggggcg gtgtgagtac tgaacacgat tttatgcaac gctttggtga
     2701 aacggatata tggtataaaa gttatatagt gcccaatgac actttagtgg aatacaaatt
     2761 agctccagat gtgccgacat tgcccgttga tgagaatacc caacgcagag cgttactggc
     2821 tacggctcaa gccgatccac tcaataaaac agcatacttc gagaaaatcg gacaaaatat
     2881 tcataatacc gataaattca actacgcttc gctacttaaa ttgccaaacg cacctactca
     2941 atcttttttg actgaagctc caaatattgc aaaaggtaaa ctgcagcagt tgatttttga
     3001 gagtgcaaca ctcggcaata aacacagatt attcgtctat ctgcctgacg gttttagtgc
     3061 agaaaaaaac tatgcggttc tctatttatt tgatggtgtt gaatataccg aacgagtgcc
     3121 aactaaaacc attttagata atatgatcgc tcagaaagtg attctgccta ctgtagcggt
     3181 gtttatcgaa aatccatcga gtgaatcaag acgtgtcgag ctgcctgcca atcccatatt
     3241 tacgcaagta ttggcaaaag aacttgtacc ttttgttgaa aaacagctca atataaaaac
     3301 aaaggagcga attattggcg gctctagcta tggcgggcta tcctctgctt acaccgtact
     3361 caactatcct aatgtattta gtaaagcatt gattctatcc ggttcatttt ggtggcaacc
     3421 caaaggcaca cctagtgaac aaagccacta tattgctcaa caatttatcc aaaaagaaaa
     3481 attaccactc tgttttttca tcagtgcagg tttttatgaa agcgggaaat cggctatttg
     3541 taagcggtcg aattattttg catagaatta cactcaattt tgcatagata aaaattaaaa
     3601 actatgcaaa ataattgtag aagatcaaac ctaatctgac agtcccccgt tttaaattac
     3661 cgtgtctgtc agattaattt gagcttaaat tcttttccac ccaaacgcgt ctattttgat
     3721 tcagcaatgc ttcaacacca ccttgctcaa ccgcttgttg ataacgatag aatgtatctc
     3781 ggctcattcc cattactttg caggcttgag aaatattacc cagttcttct gctaaattta
     3841 ataaaccgct cttgtgttta atgagagggt tgttagaata aaacatgaga gtttcctttt
     3901 tgtttagatt gatttttgac actcatattc taaacgggaa ac
//
LOCUS       DANLTI010000176         3866 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.178, whole genome shotgun sequence.
ACCESSION   DANLTI010000176 DANLTI010000000
VERSION     DANLTI010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.178"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>3866
                     /locus_tag="PXB09_002524"
     CDS             <1..>3866
                     /locus_tag="PXB09_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDL5234578.1"
                     /translation="WEIYDLAPILSKMLGVEISFDKWALYDVARYCDQLVPDGMGGME
                     PRFTCNVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVG
                     GFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDDEEIKKHGLNLSQITAFGCTSR
                     GQAHRTGKWILETEKREKETITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAIN
                     GRKVTLDREISIDNASYFTYINGEATHSSKIQSVNGKEITLDSTPTGLETYGVWSLST
                     KQISSGLYRSISIVENADGTNTITALQHEPQKEAIVDNSAHFVETARTLYKAPQINAV
                     EVSTGYDGKLYITGDISSGDGKLTYDIKITKDGNLYQYKKGLSDPNIELSDLPNGDYT
                     VIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAA
                     ETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRHTRGINVGPFYQQQGVRGQTAVD
                     LDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTVANLTDKGTKLASSQVYNQADGK
                     LYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQ
                     EITNRQDAVTAEANNRTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISA
                     VTAKADNALSGLEEEKTARANADKAESQAREALTARMGAAESNIVTIQRTVANNAQSI
                     SEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNG
                     PVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETE
                     FNHYKLTFKAPFTTQQGYVLIGFRQTSTEQFVEFHSVKLEKGNVATDWTPAPEDVESA
                     VSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKAETNFNAKITEEKKARVDADKVN
                     ADKLTDITSRVANAESTITNFQSTKANKSEVASIAQQNLQSIWRTDAQSAVDALKIGG
                     ANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVTQAGTGHFGVTQGTQKATTRIR
                     QGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRLPTLPLTASLSQRPKVTFTAPW
                     TSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGWTPTAKDIDDKVSAVQSNLTAY
                     QAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVTELNQTTVTTLRDLTARTKTTE
                     GSLSRLETAKANKTEVASIAQSSLQS"
BASE COUNT         1219 a          836 c          887 g          924 t
ORIGIN      
        1 cttgggaaat ttacgattta gctccgattt taagcaaaat gcttggggtt gaaatcagtt
       61 ttgacaaatg ggcgttgtat gatgttgctc gctattgcga tcaacttgtg ccggacggta
      121 tgggtggaat ggagcctcgt ttcacctgta acgtatggct cacggaagtt aaaactgcct
      181 atgacttgtt gaatgatttc tgctcggtat tccgtgcgat tccgatttgg accggaacag
      241 aagtatcggt cattatcgac cgtccgcgtg atccggtttg gacttacaca aatgctaatg
      301 tagttggtgg atttgaacga tcctactctg ctcgcaaatc acgccataat gcagtgcaag
      361 ttacttattc ggataaaaca aatggctatg aaagtgcgat tgaatatgtc tctgatgacg
      421 aggaaatcaa aaagcacggc ttaaatttaa gtcaaattac tgctttcggt tgtacctctc
      481 gggggcaagc acaccgtacc ggaaaatgga ttttggaaac cgaaaaacgg gaaaaggaaa
      541 ccattacttt taccgtggga cgtgagggct taatgcactt gccgggcgat attattcgtg
      601 tggcagacag ccattatgcc ggtacggaaa ttggcggacg tgtactggcg attaatgggc
      661 gaaaagtcac gttagatcgt gaaattagca ttgataacgc cagttatttt acctatatca
      721 acggtgaggc aacgcactct agcaaaatcc aatcggtaaa cggcaaagaa attacgctgg
      781 atagtacacc aaccggctta gaaacctacg gtgtttggtc gttatcgact aaacaaatca
      841 gctctggatt atatcgctca atctcgattg tcgaaaatgc ggacggcaca aacactatca
      901 cagcgttaca acacgaaccg cagaaagagg caattgttga taactccgct cactttgtgg
      961 aaacggctag aacactctac aaagctccac aaattaacgc agtggaagtc tcgaccggtt
     1021 atgacggtaa gctctacatt accggtgata ttagctccgg tgatggcaag ctaacctatg
     1081 atattaaaat taccaaagat ggcaatttat atcaatacaa aaaaggctta agcgatccga
     1141 acattgaact aagtgattta cctaacggcg attataccgt cattatttac ggcaaaaacg
     1201 ccaaagggca aatcgtcacc gaaaaaacac aaacctttac tattgatcga cctccagctc
     1261 cgaccggtgt agtagtaaca ggtggattag ggcaaattac cctcgaatgg gattgggtaa
     1321 atgaggttac gcaaaccgag attttcgcgg ccgaaaccga taatttcgcc cttgcaaaaa
     1381 aaatcgcaaa agtgaccgct agaacctacg ctcacacact aaaaggtaac aaggttgtac
     1441 gctattattg gctacgtcat accagaggca ttaatgtcgg accgttttat caacaacagg
     1501 gggtaagagg acaaacagcg gttgatttgg atgctcgatt aaccgaatta aacactcagt
     1561 tatcacgcaa tattgttaat gaggtttttg atgttgctgc accggcaaga ggtttagaat
     1621 tagtgaaaac agtcgctaat ttgaccgaca aaggtactaa actggcgtca tctcaagttt
     1681 acaatcaggc tgacggcaag ctctatactt ggaacggtac agcatactca gctacagtgg
     1741 ctgcggaaga tgttaccggc aaattatcaa aatctaaaat tgatacgtcc cttatttcgc
     1801 aattaacagg tgcagataac accgcaaatt tggcaagaag attagcggaa acagctcaaa
     1861 gcaacattaa ccaagagatt actaaccgac aagatgccgt tactgccgaa gcaaataacc
     1921 gtactaaagc cattcaagcc gaaagtgcga atttaacgaa aaaaattcaa gctgaagcaa
     1981 ccgctcgtgg ggctgctgtt acacagttac aaaatgttga tgctcaacaa gcacagttga
     2041 tttctgctgt cacagcaaaa gctgataatg ctctttcagg cttggaagaa gaaaaaacag
     2101 cacgagcaaa cgccgataaa gcggagtctc aagcacgtga agcattaaca gcaagaatgg
     2161 gagcagctga aagcaatatc gtaactattc aacgtacggt agcaaataat gcccaaagca
     2221 ttagtgaagt cagtcagaat ttaaatgcta agattgataa tattaatatc ggcggtcgga
     2281 atttattaag agacagcgag ttcaatgcgt acaataaatg gggtagccca caaattgaat
     2341 ttgctgaaaa tgcaaatcgc cgaactatca aagtaacctc aacaggtact aacggtcctg
     2401 ttggtattgt ttcatctaat cgccattcca catcttattt ccaacaagga gaaacttata
     2461 cactctcatt atttgctcga ggaagtaagg cactagacta tctctatcta atgcgtcaag
     2521 atgggaataa cgttagatta ccagtgatta acgttgcctc tgaaactgag tttaatcatt
     2581 acaaactcac gttcaaggct ccttttacca cgcaacaagg ttatgtctta atcggttttc
     2641 ggcaaaccag cacagagcag tttgttgagt ttcacagcgt caaacttgaa aaaggcaacg
     2701 tagccacaga ctggacacca gcaccggagg atgtggagag tgcggttagt gctgtttcgg
     2761 ctgatttaac gagttataaa caaactcaag cggctaccga ttcagcacaa gcacagcaac
     2821 ttaatcagtt atctgtgaac ttgaccaaag cagagactaa tttcaacgcc aaaatcacgg
     2881 aagaaaaaaa agctcgtgtt gatgcagata aagtgaatgc agataaactc acagacataa
     2941 caagccgtgt tgcaaatgcg gaatcaacta ttaccaattt ccaatcaacc aaagcgaata
     3001 aaagtgaggt ggcaagtatt gcccagcaga acttacagag catttggcgc accgatgcgc
     3061 aaagtgcggt ggatgccttg aaaatcggtg gtgcaaatct actggttgat agtgagtatt
     3121 tgacgacagc ccgttggggc ggtagctcac gagtggcaag ctcgcaatat ggtgatcgtc
     3181 gcttgactca agtgtttgtg acccaagcag gcacagggca ttttggtgtg actcaaggca
     3241 cacaaaaagc cactacgcgt attcgtcagg gtgaaaccta taccttgtca ctaaatgcgc
     3301 aggggacggc aggttttacc cgcacagggt taaactatgt gtaccttatc cgcgaagatg
     3361 gtggcaattt tagattgcca actttgccgc ttactgcatc attgtcccaa cgccctaaag
     3421 tgacatttac tgcgccgtgg acgagcaatc aagttcggtt actgattggc gcaaatggca
     3481 tatttgaggc gacagactgg ttcgcatttc acagcgttaa gctcgaaatg ggtaatgttg
     3541 ccacaggctg gacaccaacc gccaaggata ttgacgacaa agtatcagcg gttcagtcca
     3601 acctcaccgc ttatcaggcg gcacaagcta aagcagatca agccaaagct acgcagattt
     3661 cggggctcac aacccgaatg ggggcagcgg aaagtaacct cactcgcacc gaacgggcag
     3721 tgacggaact taatcagaca acggtgacga cactgcgtga tctaaccgcg cgcaccaaaa
     3781 caacggaagg ttcgctctct cgtttggaaa ccgccaaagc aaataaaact gaggtggcaa
     3841 gtattgctca aagctcctta cagtca
//
LOCUS       DANLTI010000177         3725 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.179, whole genome shotgun sequence.
ACCESSION   DANLTI010000177 DANLTI010000000
VERSION     DANLTI010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3725
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.179"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(125..1627)
                     /gene="ppx"
                     /locus_tag="PXB09_002525"
     CDS             complement(125..1627)
                     /gene="ppx"
                     /locus_tag="PXB09_002525"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDL5234579.1"
                     /translation="MSSNIAPREFAAIDLGSNSFHMIVARIVNGSIQVLSRLKRRVRL
                     ADGLDENLVLSQDAIDRGIACLALFAKRLEGFSAENVKVVGTYTLRRAINNQAFLEQA
                     KAVFPYPISIISGQQEARLIYSGVSHTQPETGRKLVVDIGGGSTEMTIGDDFTPIRAE
                     SRHMGCVSFAKRFFPQGELTIERFDSAYQLAMEKIEDLMWEYKELGWDYALGSSGTIK
                     TVHQVLIANGYRDGLITESRLQKIIDICLEFKSLNEIKLRGLLDERADVLVPGLAILL
                     ALFHTFRIDVLRYSNGALREGVMYGLEKSFQVGDIRQRTAEALAEQFALDKQQAKRVE
                     HTALILFDQIKTWKNRRQVQDLRSMLKWASLLHEIGIVVNHNNVHRHSAYLIANRDLP
                     GFDFEQQTLLSVLMRYHLKGFKRSDIRSINRYQCRDVLTLVRVFRLAVLLNRSRQATV
                     VPKQLNLVIENNAWQLTFEQGFLANNPLISIDLEEEQKILASTNLQFAVS"
     gene            1823..2152
                     /locus_tag="PXB09_002526"
     CDS             1823..2152
                     /locus_tag="PXB09_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDL5234580.1"
                     /translation="MSEVNKSFHDMLEYVHLYRLKNKLHRETADNDRKIRDNQKRVLL
                     LDNLTQYITDEMSIEEVRAIISNMRDDYENRVDDYMIRNAELSKQRREIRQKMASHKQ
                     APTNKKA"
     gene            complement(2216..3646)
                     /locus_tag="PXB09_002527"
     CDS             complement(2216..3646)
                     /locus_tag="PXB09_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDL5234581.1"
                     /translation="MSTLTYLQKIGRALMVPVAALPAAALLMGIGYWIDPDGWGTNSQ
                     LAALLIKSGAAIIDNMSILFAVGVAFGMSKEKDGAAALSGLVGYLVITTLLSPGTVAQ
                     LKGIAVDQVPAAFGKINNQFIGILVGVISAEIYNRFYQVELPKALSFFSGKRLVPIVV
                     SFILLYVWPVIFGALVSFGESIKDMGALGAGIYAFFNRLLIPVGLHHALNSVFWFDVA
                     GINDIPNFLGGAKSLAEGKAVIGVTGMYQAGFFPMMMFGLPAAALAIYHSAKPAKKMQ
                     VASIMFAAALASFFTGITEPLEFAFMFVAPVLYVVHALLTGLSVYIAASMEWIAGFGF
                     SAGLVDLVLSTRNPLAVQWYMLLAQGIVFAVIYYVLFRVVIQAFNLKTPGREEDSEVQ
                     TVNTVSRSEQAAKFVEALGGKENITSIDACITRLRLTLNDTAKADETKLKALGSKGNI
                     KLGENGYQVILGPEAEFVADAMKKLN"
BASE COUNT         1213 a          849 c          649 g         1014 t
ORIGIN      
        1 aaatgagaag ttgatcaaat tttaaaaaat actttttgca aaaaattagc taaatttgac
       61 cgcttgttcg caaaagggaa tgcaataaac gaaaaaggaa gccttcgctt ccttcattta
      121 aatgttaaga gaccgcaaac tgaagatttg tactcgccaa tattttttgc tcttcttcta
      181 aatctattga aatcagtgga ttattcgcta agaagccctg ttcaaaggta agttgccaag
      241 cattattttc aatcaccaaa ttcaactgtt tcggcactac agtcgcttgg cgagaacggt
      301 ttaatagcac cgctagccgg aaaacccgta ccaacgttaa tacatctcta cattggtaac
      361 ggttgatact acgaatatcc gagcgtttga atcctttaag gtggtatcgc attaataccg
      421 atagaagggt ttgctgttca aaatcaaatc ccggtaaatc tcggtttgca atcaaataag
      481 cagaatgacg atgcacatta ttgtggttta caacaatacc aatctcgtgt aataaacttg
      541 cccatttcag cattgaacgc agatcttgca cttggcggcg gttcttccaa gttttgattt
      601 ggtcaaataa aatcaacgcc gtatgctcca ccctttttgc ttgctgttta tctaaagcaa
      661 attgctcagc taacgcttct gcagtccgtt ggcgaatatc cccaacttgg aaacttttct
      721 ccaaaccata cattacccct tctcttaaag ccccgttgga ataacgtaat acatcaattc
      781 taaaagtgtg aaaaagtgct aaaagaatag ctaagcccgg aactagcaca tctgctcgtt
      841 catcaagtaa gcctcgtagc ttaatctcat ttaacgattt aaactctagg caaatatcaa
      901 taattttctg taggcggctt tctgtaatta agccatcacg atagccattg gcaatcagca
      961 cttgatggac ggttttaatc gtaccggaag aacctaaagc atagtcccaa cctaactctt
     1021 tgtactccca cattaaatct tcgatttttt ccattgcaag ctgataggca ctatcaaaac
     1081 gctcaatcgt taattccccc tgcgggaaaa agcgttttgc aaaactcaca caacccatat
     1141 gacgactttc cgctcgaatc ggggtaaagt catcaccaat agtcatttcc gttgaaccac
     1201 cgccaatatc taccactaat tttctgccag tttcgggttg ggtatggcta acgcccgaat
     1261 aaatcagcct cgcctcttgt tgtccggaaa taatggaaat cgggtaagga aatactgctt
     1321 tcgcttgctc cagaaaagct tggttattga ttgctctacg taaggtataa gtgccaacca
     1381 ccttcacatt ctctgcagag aacccttcta aacgttttgc aaataaagct aaacaagcaa
     1441 tgcctctatc aatcgcatct tggcttaata ctaagttttc atcaagccca tctgccagcc
     1501 gtacacgccg tttcaaacgg gaaagcactt gaatggaacc atttacgata cgggctacaa
     1561 tcatatgaaa gctgttcgag cctaaatcaa tagctgcaaa ctctctagga gcaatatttg
     1621 atgacataat gaaaccctgt accaataact gaaataagta agatattacc atttttgagc
     1681 cctagatatc actacaaatt tagcgttatt cgcgagaatt aatttaaatc ataaaatgtg
     1741 ataaattttt ttgacgaatt gacggaaaaa gaataggatt tacgagctta cttaattcaa
     1801 cactacatca agggagattg atatgtctga agtgaataaa tcattccacg atatgctgga
     1861 atatgtgcat ctttatcgtc taaaaaacaa actgcaccgt gaaacggcgg ataatgatcg
     1921 caaaattcga gataatcaga agcgtgtact tttattagat aacctaacgc aatatattac
     1981 cgacgaaatg tctatcgagg aagttcgagc gattatttcc aatatgcgtg atgactatga
     2041 aaatcgagta gatgattata tgatccgtaa tgcggaactt tccaaacaac gccgtgaaat
     2101 ccgccaaaaa atggcctctc acaaacaagc accaaccaat aaaaaagcat aaaaagccaa
     2161 gcggtctgat ttgcaaaaaa atatgcaaat cagaccgctt gtgattaagc agagattaat
     2221 tcagcttttt cattgcatct gccacaaatt ctgcttccgg tcccaaaatc acttggtagc
     2281 cattctcgcc taatttgata ttaccttttg accctaacgc tttcaatttg gtttcgtctg
     2341 ctttcgccgt atcatttaag gttaggcgta agcgggtaat acaagcatca atgctggtaa
     2401 tattctcttt accacctaat gcttcaacaa atttggcagc ttgttcgcta cgagaaacag
     2461 tattcactgt ttgtacttcg ctatcttcct cacgccccgg cgtttttaaa ttaaaggctt
     2521 ggatcactac tcggaacaat acatagtaaa ttactgcgaa tacgatacct tgggccaata
     2581 acatatacca ctgcactgcc agcggatttc gtgtcgataa cactaaatcg accaaccctg
     2641 cactaaaacc gaaaccggca atccattcca ttgaggctgc aatataaaca gataatccgg
     2701 ttaataatgc gtgaaccaca taaagcacag gtgcaacaaa cataaaggca aattcaagcg
     2761 gttccgtaat gccggtgaag aacgaagcta aagcagcagc aaacataata gaggctactt
     2821 gcattttctt agccggtttc gcactgtggt aaatagctaa tgctgccgca ggtaagccaa
     2881 acatcatcat cgggaagaaa ccagcttgat acatacctgt tactcctatc actgctttgc
     2941 cctcagccaa tgattttgcc ccacctaaga agtttggaat atcattaatg cctgcaacat
     3001 caaaccagaa aaccgagttt aatgcgtggt gtaatccaac cggaattaat aaacgattaa
     3061 agaaagcata aatacctgcc cctaacgccc ccatatcttt gatagattcc ccaaaagaga
     3121 ctaaagcacc aaaaataacc ggccagacat aaagcaagat aaatgacacc acaatcggca
     3181 ccaatcgttt accgctaaag aaagacaatg ctttcggtaa ctctacttgg tagaaacggt
     3241 tataaatttc ggctgaaata acccctacta agatcccgat aaattggttg ttgattttac
     3301 cgaatgctgc aggcacttga tcaactgcga tcccttttag ctgagcaacg gtccccggag
     3361 acaacaaagt ggtaattact aaatacccga ctaaaccgga taatgctgct gccccatctt
     3421 tttcttttga cataccaaat gccacaccca cggcaaatag aatagacata ttatcaataa
     3481 ttgccgcccc agatttaatc agcaatgccg ctaattggct atttgttccc cagccgtccg
     3541 gatcaatcca atagcctata cccatcaata atgctgctgc tggtaatgca gcaaccggca
     3601 ccattaatgc acgcccaatt ttttgtaaat aggttaatgt actcataaaa gcctccaaaa
     3661 atacctcata atgagtaact taagcataga aaaaaaccga ttaaagaaca atcaaataaa
     3721 tttgg
//
LOCUS       DANLTI010000178         3697 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.180, whole genome shotgun sequence.
ACCESSION   DANLTI010000178 DANLTI010000000
VERSION     DANLTI010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.180"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(126..2690)
                     /locus_tag="PXB09_002528"
     CDS             complement(126..2690)
                     /locus_tag="PXB09_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDL5234582.1"
                     /translation="MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVEL
                     QQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIM
                     RAIWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILEL
                     YLNKIYLGYRSHGVAAAAKTYFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAED
                     RRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGE
                     NIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGAEKLWTGSSAWDDEKII
                     DHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFAPKGLKAGEQIWVR
                     QNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIK
                     PFIYTAAMNKGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKNM
                     VAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGY
                     LIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKYFESVKIHDEAQVGVQTI
                     ANSSNNDDDDVVEDVGDSEPELQANNSEKNAPSLMAESSHHIKGLRYAPHVISDELAF
                     LMRSALATAITGEPEYGWRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANIST
                     VVYVGFDDNKRVLGRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNS
                     GFLGNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTESAPLRLGLPPPGVLKSGELF"
     gene            2814..3512
                     /locus_tag="PXB09_002529"
     CDS             2814..3512
                     /locus_tag="PXB09_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComA"
                     /protein_id="HDL5234583.1"
                     /translation="MKLLKAHSKTPSNRIILGLSEDEQRYCLVKNKAEKFTVFWQAKP
                     ASIEELIGNLTPQEQAMMTLVRPIPYQYIWRKTVFMANTLNEAQLHRKVIHILKNEQP
                     LALDLLNIDYQRFPSSNDNLDKVVIYAVRKSYTENLSQFNSILDCELHCYARAIIHLT
                     QSQNNQPAPCFSFKQKYFQFTETELLILQTEPEDCIHLSDLKIDHLEIECEQEKQLYC
                     LALGASLWNGKVLI"
     gene            3488..>3697
                     /locus_tag="PXB09_002530"
     CDS             3488..>3697
                     /locus_tag="PXB09_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234584.1"
                     /translation="MEWQGIDLSANRKNNWFAGSDKGIKNVIYTLLLSALISLALIFL
                     YLQKNQEIQPLAQQLELVKTDILNIE"
BASE COUNT         1126 a          816 c          613 g         1142 t
ORIGIN      
        1 tcatttattg actaaggaat atccaaatat aactcacaaa tcgcccaaaa taaaattggc
       61 acttattatc gcaagaaatc cccctatttt tcaactttta agagcattat ccttgtaata
      121 aattattaga ataattcacc gctttttagc acccctggtg gaggtaatcc taaacgtaac
      181 ggcgcagatt ctgttttttg aggcgctttt tcagtataag ctctctctac aatataacgt
      241 tttgtaggct cagtaccctt aataaaatac tctttacgtc catttcctaa gaaaccacta
      301 ttagggtcaa tattaacctc aataatattt tttggaaggg tacttttttc gacaggctta
      361 tctgacaatg caactttcat ataatttgtc caagctggta aagcagtact agaacctgaa
      421 gcacctctac ctaatactct tttattatca tcaaagccaa cgtacacaac agtagaaata
      481 ttagcaccaa atcccgcata ccaagttgcc ttggcattat tggttgtacc agtcttcccg
      541 cccacatccg ctcgttttat cgtattgagc attttatagc ttgttcctcg ccagccatat
      601 tcaggctcac cagtaattgc tgtagctaaa gcactacgca ttaaaaaagc gagttcatca
      661 ctaataacat gaggagcgta acgtaaccct ttgatatgat gagaagattc tgccattaag
      721 ctcggcgcat ttttctcgct attgttcgct tgtaattcag gttctgaatc gccaacatct
      781 tccacaacat cgtcgtcatc attattcgag gaattcgcta tagtttgtac accgacttga
      841 gcttcatcat gaattttgac tgattcaaaa tatttaggct cagggtaaac aactgggcta
      901 tcgcaactat tacaagctac tacaggattt gcttgatata actcgtagcc ttgggcatca
      961 ataatacggt caatgatata tggttcaatc aaataacctc cattattaaa tactgcataa
     1021 gctcgagcca tttctaatgg cgtaaaagat gcagcaccca atgcaagaga ttctgttgca
     1081 acatactgat ttcggttaaa gccaaaacgt tgtaagtagt ctgcaacata atcaatccct
     1141 gccatttgta atatacgaat agccaccata tttttcgatt tacctaatgc aacacgagtt
     1201 ctcaacgggc cgccataaac cccatcggca tttttaggtc gccactcttt ttgccctttc
     1261 tttttaatga caataggaga atcgctaatt gttgttgaaa gacttagccc tttattcatt
     1321 gccgctgtgt aaataaacgg tttaatcgca gagcctacct gaactaatga ctgagtcgca
     1381 cgattgaaac ggctttgttc aaagctaaag cctccaacga tagattcaat ggcaccgttt
     1441 tcactattaa ttgacactag ggctgaattt acctccggaa tttgtcctaa agcccactcc
     1501 ctatttttat tttgacgtac ccaaatttgt tcacctgctt ttaacccttt aggtgcaaaa
     1561 gaagcatttg tacgttttaa aacagagata tcaccatttg ccaataaaat tgtatatttt
     1621 gatttatctg cttgcattac aacagctggt gtaaacggct ctgattttgg cagcttactt
     1681 aaatgatcga taattttctc atcgtcccaa gcagaactac ctgtccataa tttttcagcg
     1741 cctcgccaac catgacggcg gtcataatca atcaaatttt cacgtaacgc atcttgtgct
     1801 gctttttggt ctgctgaaag taccgtggcg tacactttta agcctttgtt ataagcaata
     1861 ttttctccat agcgtttcac aatttcttga cgaaccattt ctgtcacata atccgctcga
     1921 aattctaatg tcgcaccata gtagttagct actactggct ctgctttagc tttctcatat
     1981 tcctcttttg taatatctcc ggtttctagc attctcccaa gcactacatt acgacggtct
     2041 tccgcccgtt ttactgaata aagtggattc atcgttgaag gcgcttttgg aagccctgca
     2101 ataattgcta tttcagaaag ggttaaatct ttcaaagatt tattaaaata agttttagcc
     2161 gcagcggcaa caccgtgaga acgataccct aggtaaattt tgtttaaata cagctccaga
     2221 atctcatttt tactgagaac ctgttcaatt tctaaagcta aaattgcctc tttggcctta
     2281 cgctctaaac tacgttcagg tgttaagaaa aagtttttcg ccagctgctg ggtgattgta
     2341 cttgcgcctt gagtatctcc ctggctagtg cgccatattg cacgcataat acctttagga
     2401 tcgatccctt tatgctcgta aaaacgtgca tcttcggtag caagaatcgc ttttactaac
     2461 atcggtggaa tatcatcaag cttgaccgga atacggcgtt cttctcctac ttcaccaatt
     2521 aatttaccat ctaaggtaaa aatctgcata ggctgctgta actctacatt tttcagcgtt
     2581 gccacatcag gcaaatcaga tttgaaatgc atgtacagta aaccaccaat taccccacct
     2641 aaaaccaaga gtgaaagtaa agcactaaat attatttttg cgatccgcat cgaaaaaatc
     2701 tcttttggtt aatgacgaaa cataaattta aagccaatat taggtcacta agtataagct
     2761 aaaaacgctt acttcgcata actaattgca aaactttcct tactatactt actatgaaat
     2821 tacttaaagc acattcaaaa acaccttcaa accgtatcat cttaggctta agtgaagatg
     2881 aacaacgtta ctgcttagtc aaaaataaag cagaaaaatt caccgttttt tggcaagcca
     2941 agcctgcgag catcgaagag cttatcggta atctcacccc acaagaacaa gcaatgatga
     3001 cgctggttcg cccgatccct taccaataca tttggcgaaa aaccgttttt atggctaaca
     3061 ccctcaatga agctcaatta caccgtaagg taattcacat tttaaaaaat gagcagccac
     3121 ttgcattgga tctactcaat attgactatc agcgatttcc aagcagcaac gataatctgg
     3181 ataaagtggt tatctacgcc gtgcgaaaaa gttataccga gaatttgagc caatttaaca
     3241 gcatcttaga ttgtgagctg cattgctatg cacgggctat aattcattta acacaatccc
     3301 aaaataatca gcctgcgccc tgtttttcat ttaaacagaa gtacttccaa tttaccgaga
     3361 cggaattact gatattgcaa acagaacctg aggattgtat tcatctatct gatctcaaaa
     3421 ttgaccatct tgaaatcgag tgtgagcaag agaaacagct atattgcctc gccttaggag
     3481 caagtttatg gaatggcaag gtattgattt aagtgctaat cgaaaaaata actggtttgc
     3541 cggcagtgat aaaggcatca aaaacgtgat ttatacactt ttattatctg ccctcattag
     3601 cttggctctg atttttctct atttgcaaaa aaatcaagaa attcaaccgc ttgcacagca
     3661 attagagctg gtaaaaaccg atatattaaa tattgaa
//
LOCUS       DANLTI010000179         3684 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.181, whole genome shotgun sequence.
ACCESSION   DANLTI010000179 DANLTI010000000
VERSION     DANLTI010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3684
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.181"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            23..2473
                     /locus_tag="PXB09_002531"
     CDS             23..2473
                     /locus_tag="PXB09_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HDL5234585.1"
                     /translation="MTVEVGGVVITADLEFENLLRDTQKVDKAMDDIGKSTLKAEKGL
                     KGLETQATKTAIAVNQATNKMKNIRGVAGQLGYQIQDISIMLQMGSNASTVIAQQGSQ
                     ILSIFGPMGAVAGAILAISGAIGGALLPSLFDSTDATELLAAAQKNLSEVVTQTESGV
                     SALSAKIIKLAKVSEDAAKAKIAVAMSDAKIAIKAAGDSSQKAFEQFDGFFGSFTNSS
                     QSIRNAIDELKRYESKGKDVGAVIKELGGTYGGAIAEVNALDSVTSEMSKTLGITQSE
                     ALGLIKLLAQLEQDKSPDNIKLLAIALSDLSDKNGWANEELNKLTRTINDNSVSALDA
                     ETSVRLLESAIKDLQNAIQNSQGALDGNVAKMNQLADAAERKAATIGKTERETAKYAA
                     TLLATTDEAKKNLDSTLSRIDASYDQIEAYQAEQKALQDKKTADAKAAREAEAAAKKS
                     AQAKKQVVEQLRQMATQYEIAVLRQKGMHLEAVKLEAGMRLGAAATKEQREEAEKLAQ
                     SIYGATAASQNFNAIQAQASPVTALDQRHQQQLAQIEEYKILYPQKIMEAEAARAAIE
                     EQYRQQRMEAQWEEWKQASDGARMFGDAVDAVGSSATSTITGLLNGTMSVRDAFASIA
                     NTILNSVVQSLVEMGMAQVKQMIMGQTAAKASMAAQMVQAKALAASFAPAASMVSLAT
                     QGANAIPAQAAITSTMSMAQVAAVTGRKLGGPVSARQMYRVGENNQPEIFKASNGMQY
                     MIPGQSGRVFSNKQSQGQGGGESKTVAVIVNQTNHFSSDEASANQAAVAKALSNQIKA
                     SVRLELQSQMRAGGVLAR"
     gene            2477..2806
                     /locus_tag="PXB09_002532"
     CDS             2477..2806
                     /locus_tag="PXB09_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234586.1"
                     /translation="MQTFNFKVEQDYTVQNEPSVVILKFADGYEQTAPKGLNHNLKKY
                     QGITVKANKAEAVKIQQFLNAHGGYKKFNWRDRTSDETVTVRCRSWSSTKLGAVIEFT
                     LNFDEVI"
     gene            2806..3276
                     /locus_tag="PXB09_002533"
     CDS             2806..3276
                     /locus_tag="PXB09_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5234587.1"
                     /translation="MPKAPPKKMASELIKLEQDALIELWEIDLTHIYSSSNPNQRGEI
                     FRFHNGVSQTQQNIWWQGNEYQAYPIAADGFEISGQGPSNRPTLTVSNLYGVVTVLVE
                     DFGQPVEAKVSSEETVDGNIQMTVELLKKMDQIADQRYRRNQLNDLRTGGTLSK"
     gene            3284..>3684
                     /locus_tag="PXB09_002534"
     CDS             3284..>3684
                     /locus_tag="PXB09_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5234588.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRKLQDKNGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEATGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADP"
BASE COUNT         1230 a          737 c          866 g          851 t
ORIGIN      
        1 aaataatttt aaggaattgt ttatgacggt cgaagttggc ggagttgtaa ttaccgcaga
       61 tctagaattt gaaaatctgc taagagatac tcaaaaagtt gataaagcga tggatgacat
      121 cggaaaatca acattaaaag cagaaaaagg gctgaaaggg ctagaaacgc aggcaaccaa
      181 aacggcgata gcagtaaatc aagccacaaa caaaatgaaa aatatccgtg gagtagcagg
      241 tcaacttggt tatcaaattc aagacatctc aataatgctt caaatgggtt ctaacgcttc
      301 aaccgttatt gctcagcaag ggtcgcaaat cttaagtatt ttcggtccaa tgggagctgt
      361 tgcaggggcg atcttagcta ttagtggtgc tattggtggg gcgttactcc ctagtttgtt
      421 tgattcaact gatgcaactg agcttttggc agcagctcaa aaaaatctca gcgaagtagt
      481 tactcaaacg gaaagtggtg tttccgccct ttctgcgaaa atcattaaat tagcaaaagt
      541 aagcgaagat gcagcaaaag caaaaattgc agtagctatg agtgatgcaa aaatagctat
      601 taaggcagca ggggattcat cacaaaaggc atttgagcaa tttgacggct tttttggatc
      661 gtttacaaat tcaagtcaaa gtattcggaa cgcaattgac gaattaaaac gctatgaatc
      721 aaaaggtaaa gatgttggtg ccgtaataaa agaacttgga ggcacatatg gtggtgcaat
      781 tgccgaagtt aatgcgctgg attctgtgac aagcgaaatg tctaaaacgc ttggtattac
      841 tcaatctgag gctcttggtt tgataaaact gttggctcaa ttagagcaag acaaaagccc
      901 tgataatatt aaattactcg cgatagcttt atctgactta agcgataaaa atgggtgggc
      961 gaacgaagag ctaaataagc taaccagaac gataaacgat aattcagtat ctgctttaga
     1021 tgccgaaaca tcagtaagac tcttagagtc tgctataaaa gacttgcaaa atgcaatcca
     1081 aaactcccaa ggtgcattgg atggcaatgt agcaaaaatg aatcaacttg cagatgcggc
     1141 agaaagaaaa gctgcaacga taggcaagac tgagcgtgaa actgctaaat atgcagctac
     1201 gctattagct acaaccgatg aagctaaaaa aaatcttgat tccacattaa gtaggattga
     1261 cgcatcatac gatcaaatcg aagcctatca agccgaacaa aaagccttac aagataaaaa
     1321 gaccgcagat gcaaaagctg ccagagaagc tgaagcggct gcaaaaaaat ccgctcaagc
     1381 caagaagcaa gttgtcgaac agttgcgaca aatggctaca cagtacgaga ttgctgtttt
     1441 gaggcaaaag ggaatgcatc tcgaagccgt aaaattagaa gctggtatgc gtttaggagc
     1501 tgcggcaaca aaagagcaac gagaagaagc tgaaaaacta gcacaaagta tttatggagc
     1561 aaccgcagca agtcagaact ttaacgctat acaagcccaa gcatctcctg ttactgcatt
     1621 agaccaacga catcaacaac agctagctca gatcgaagaa tataaaatct tgtatccaca
     1681 aaaaataatg gaagcagaag ctgcgagagc tgcaatcgaa gaacaatacc gccagcaacg
     1741 aatggaagct caatgggagg agtggaagca agcgagcgac ggggcgagaa tgtttggtga
     1801 tgcggttgat gctgttggtt caagtgcaac aagcacaatt acggggctac taaatggcac
     1861 aatgtccgtg cgtgatgctt tcgcatcaat tgcaaatacg atcttaaata gtgtagtaca
     1921 aagccttgtc gaaatgggta tggctcaagt taagcaaatg attatggggc aaactgctgc
     1981 caaggcttct atggcggcgc aaatggtgca agctaaagcg ttagctgctt catttgcacc
     2041 cgcggcctct atggtttctc ttgccacaca gggggcgaat gctattcccg ctcaagctgc
     2101 gatcacgtca actatgagta tggctcaagt cgccgcggtg acaggtcgta aacttggcgg
     2161 ccctgtatca gctagacaga tgtatcgtgt cggcgagaac aatcagcccg aaatcttcaa
     2221 agcgagcaat gggatgcaat atatgatccc cggtcaaagc ggtcgtgtat tcagcaacaa
     2281 gcagtcgcaa ggtcaaggtg gaggcgaaag caaaacagta gctgtcatcg taaatcaaac
     2341 caatcacttt agcagcgatg aagccagtgc aaatcaagcg gctgttgcaa aagcattgag
     2401 caatcaaatc aaggcttccg tgagattgga attgcagtca caaatgcgag ctggtggagt
     2461 tctagcgagg taatcaatgc aaacatttaa tttcaaggtt gagcaagact acactgttca
     2521 aaatgagccc agtgtcgtca tactaaaatt tgccgatggt tacgagcaaa ccgctcccaa
     2581 agggttaaac cacaatctga aaaaatacca aggcattacc gtaaaagcga acaaagcaga
     2641 agcggtgaag attcagcaat ttctcaatgc tcacggtggg tataagaaat tcaactggcg
     2701 cgatagaaca agcgatgaga cggtaacggt tcgttgcaga agctggagct ccactaaatt
     2761 aggtgcagtc attgagttta cacttaattt cgatgaggtg atttaatgcc aaaagccccc
     2821 cccaaaaaaa tggcatcaga gttgataaaa ctcgaacaag atgccctgat tgagctgtgg
     2881 gagatagatc tcactcacat ctactctagc tcaaacccaa atcagcgcgg agagatattc
     2941 cgctttcaca atggcgtgag ccaaacacaa cagaacatct ggtggcaagg caatgaatac
     3001 caagcatacc cgattgccgc cgatggtttt gagatttcgg gtcaaggacc gtcaaatcgt
     3061 ccaacactca ctgtctctaa cctgtacggt gttgtcacgg tattagtaga agatttcggg
     3121 caacccgtag aggcgaaagt cagcagtgaa gagactgtag atggcaatat ccaaatgacg
     3181 gtggaactgc tgaaaaaaat ggatcaaatc gccgatcaac gctaccgtag aaatcagtta
     3241 aatgatttaa gaacaggtgg aacattatct aaataggtga agtatgccaa ttagtatttc
     3301 taaccaaatg aaactagatc ttgccaaact tgagcaaaat gcaatgctgg acttgtacga
     3361 ggttgatttg cgtaaattgc aagacaaaaa cggcaatgct ggtagtgttt accgctttta
     3421 ttctgggcta aatgaactca aaacaagtat tgtctggcaa ggtcgaactt acgaccctta
     3481 ccccatcgag gcaacaggat ttgagcgtaa cagcagcggc ccaagcaatc gccctactct
     3541 tacgctatca aatctgtttg gcttagttac gggtattgct aatcagtttg acgaatgtat
     3601 cggtgcgatt gttcgccgtc atcaggttta cgcccaatat ttagatgcag taaactttgc
     3661 tggaggtaat gccaaagccg atcc
//
LOCUS       DANLTI010000180         3674 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.182, whole genome shotgun sequence.
ACCESSION   DANLTI010000180 DANLTI010000000
VERSION     DANLTI010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.182"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            129..2105
                     /gene="cpdB"
                     /locus_tag="PXB09_002535"
     CDS             129..2105
                     /gene="cpdB"
                     /locus_tag="PXB09_002535"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDL5234589.1"
                     /translation="MLNRRKFIQLGATAMLVLGTQPSAFAQTAKNKAGLRVIATTDIH
                     GFLTDFDYYKDAPTEKFGFTRTASLIKQARAEVKNSVLVDNGDLIQGNPISDYQSTKG
                     AKEGKPEPSIMALNAMQYEVGTLGNHEFNYGLSYLDNAIKQAKFPIVNANIVKPGTDE
                     PFFTPYVIQQKEIVDEKGNKHTIKIGYIGFVPPQVMIWDKANLEGKVEARDIVKTAQK
                     YVPIVKKEGADIVVALAHTGPSDEPYKEGAENCAFYLADVKGIDAVIFGHSHRLFPNK
                     EFANSPNADIAKGTMKGVPESMAGYWGNNISVIDLSLAENDGKWGVVDGRAELRPIYN
                     TEEKKATVENHPEIVALLKETHEATRQFVSQPIGKATDNMYSYLALVQDDPTIQIVNQ
                     AQKAYVENVVKGLPELAGLPILSAGAPFKAGGRKNDPTGYTEVDKGELTFRNAADLYL
                     YPNTLVVVKATGAELKEWLECSAGMFKQIDVASDKPQYLLDWTGFRTYNYDVIDGVSY
                     QFDITQPARYDGECKLINPNSHRVVNLTFDGKPVDPKQEFLIATNNYRAYGAKFPGTG
                     DKHIVFAAPDENRQVLANYITTESKAHGQVSPKADNNWRIAPISSNAKLDIRFETSPT
                     DKAKAFIKENAQYPMEYIENDETGFAVYRIDLTK"
     gene            complement(2178..3656)
                     /locus_tag="PXB09_002536"
     CDS             complement(2178..3656)
                     /locus_tag="PXB09_002536"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDL5234590.1"
                     /translation="MDSILGKKINSTAIPSLLCDFYKTSHRIQYPEGSQFLYSTFTPR
                     SNIYAPFVTRVVSFGFQAFILKYLIHYFNDNFFSRSQHDVVSEYTQFISDTLNIEDSG
                     EHIAQLHQLGYLPIRIKAIPEGKSVAVKVPLMTIENTHSSFFWLTNYLETLINVSLWQ
                     PITSASIAFAYRKALAEFSEQTCDDNSHLPFQAHDFSMRGMSSLESAESSGAGHLTSF
                     LGTDTIPAISFVTAYYGSQHLIGTSIPASEHSVMSSHGVDELPTFRYLMAKYPNNMLS
                     IVADTTDFWHNITVNLPLLKQEILARPESAKLVIRPDSGDFFTIICGNNSSPVEHERK
                     GLIECLWDIFGGSINQKGYKVLNPHIGAIYGDGVTYDKMIRILEGLTAKGFASSNIVF
                     GVGAQTYQRNTRDTLGFAIKATSITINGVEKAIFKAPKTDNGLKKSQKGRVKVISYDH
                     YVDELTALDDFSDDLLEVVFENGKLVKSTNFDEIRQNIAQQF"
BASE COUNT         1237 a          680 c          731 g         1026 t
ORIGIN      
        1 aagaaagata aaaatgtgtt taaaatttga tataacaagc tataaatgtg aaaaaatatg
       61 gcgaacaagc ggttattttt ctaaaatatt ttacaattta ccctttcatt tcattaagga
      121 gatattttat gttaaataga agaaaattta tccagcttgg tgcaactgca atgcttgtat
      181 tggggacaca accgtctgca tttgcacaaa cagccaaaaa taaagctggc ttgcgtgtca
      241 tcgccactac ggatattcac ggtttcttaa ctgattttga ttattacaaa gatgctccaa
      301 cagaaaagtt tggttttacc cgtacggcaa gcctaattaa acaagctaga gcagaagtta
      361 aaaacagtgt gttagtcgat aatggtgact taattcaagg taatcctatt tctgactacc
      421 agtcaaccaa aggtgcaaaa gagggcaaac ctgaaccttc gattatggca ttaaatgcga
      481 tgcaatatga agtcggaacg ctgggaaatc atgaatttaa ctacggttta agctatttag
      541 ataatgctat taagcaagca aaattcccta ttgtcaatgc aaacattgtg aagccgggga
      601 cagatgaacc attctttaca ccttatgtta ttcaacaaaa agaaattgta gatgaaaaag
      661 ggaataagca taccattaag attggttata tcggttttgt accaccacaa gtgatgattt
      721 gggataaagc taatcttgaa ggaaaagttg aagctcgaga tattgtgaag accgcacaaa
      781 aatatgtgcc tatagtaaaa aaagaagggg cagatattgt cgttgcattg gcacataccg
      841 gcccttcaga cgaaccctat aaagaaggcg ctgagaactg tgcgttttat ctagctgatg
      901 taaaaggtat tgatgcagtt attttcgggc attcacatcg cctgttccca aataaagaat
      961 ttgcaaattc accaaatgcc gatattgcaa aaggaacaat gaaaggcgta ccggaaagta
     1021 tggctggcta ctggggaaat aacatcagtg tgattgattt aagcttggcc gaaaacgatg
     1081 gtaaatgggg cgttgtggac ggtagagcag agttgcgtcc aatttataat acggaagaga
     1141 aaaaagcaac cgttgagaac caccctgaaa tcgttgcatt attaaaagaa acccatgaag
     1201 caacccgtca atttgtgtct caacctatcg gtaaagcaac tgataatatg tatagttacc
     1261 ttgcgttagt tcaagatgac cctaccattc aaattgtgaa ccaagctcaa aaagcgtatg
     1321 tagaaaatgt ggtaaaaggc ttgccggagc ttgcaggatt accaattcta agtgccggag
     1381 caccgtttaa agccggtgga cgtaaaaatg acccgacagg ctataccgaa gtcgataaag
     1441 gcgaattaac tttccgcaat gcggcagact tataccttta cccaaatacc ttagtggtgg
     1501 ttaaagcaac aggagcagaa ttaaaagagt ggttagagtg cagtgcagga atgttcaaac
     1561 aaattgatgt cgcttcggat aaaccgcaat atttactgga ttggacaggt ttccgcacct
     1621 ataactacga tgtaattgac ggtgtcagct atcaatttga tataacccaa ccggctcgtt
     1681 atgacggcga gtgcaaattg atcaacccta attcgcaccg tgtggtgaac ttaacctttg
     1741 acggcaaacc ggttgatcct aaacaagaat tcttaattgc caccaacaat taccgtgctt
     1801 atggagcaaa attcccggga acaggcgata aacatattgt gttcgccgca ccggacgaaa
     1861 accgccaagt gttagcgaat tatattacca ccgaaagtaa agctcacggg caggtaagtc
     1921 cgaaagcgga taacaactgg cgtattgcac caattagctc aaatgcaaaa ttggatattc
     1981 gttttgaaac ctctccaaca gataaagcta aagctttcat taaggaaaat gcacaatatc
     2041 cgatggagta tatcgaaaac gatgaaaccg gcttcgcagt ttaccgtatt gatttaacca
     2101 aataatcaga gctaaataca agcggtctaa tttgcaaaaa aattaacaaa tttgaccgct
     2161 tgtttcattc catttttcta aaattgttgt gctatatttt gccgaatttc atcaaaattg
     2221 gtcgatttga ccaacttacc attttcaaaa accacctcta aaagatcatc tgaaaaatca
     2281 tccagtgcgg ttagctcgtc aacataatga tcataagaga ttacttttac tcgccctttt
     2341 tgcgattttt ttaagccgtt atcggtttta ggagctttga aaattgcctt ttcgacaccg
     2401 ttaattgtaa ttgaagtcgc tttgattgca aaacccagcg tatcacgagt attgcgttga
     2461 taagtttgag ccccaacgcc aaacacaata ttgctggaag caaaaccttt tgccgttaag
     2521 ccctctaaaa tccgtatcat tttatcataa gtgacgccgt caccataaat tgccccaata
     2581 tgcggattaa gcactttata acctttttgg ttaatactac caccaaaaat atcccacaaa
     2641 cactcaatca gacctttgcg ttcgtgttca acgggggagg aattgttacc gcaaataatt
     2701 gtaaaaaaat caccgctatc agggcggata accaattttg ctgattccgg tcgagctaaa
     2761 atttcttgtt ttaataatgg caaattaacg gtgatgttat gccagaaatc ggttgtatct
     2821 gccacaatag atagcatatt atttggatat tttgccatta aataacggaa agtcggcagc
     2881 tcatcaacac cgtgtgaact catcaccgaa tgttctgatg ccggaataga tgtaccgatt
     2941 aaatgttgag aaccataata ggctgtcacg aatgaaattg caggaatggt atctgtgcct
     3001 aaaaatgagg ttagatgtcc ggcaccggag ctttctgctg attctaagga actcattcca
     3061 cgcatagaga aatcgtgtgc ctggaagggt agatggctat tatcatcaca ggtttgctct
     3121 gaaaattcgg ctagagcctt acgataagca aatgcaatgg aagctgatgt aataggctgc
     3181 cataatgaca cattaatcag ggtttccaaa taattagtca gccaaaaaaa gcttgagtga
     3241 gtgttttcaa ttgtcattaa aggaactttc actgcaacag attttccttc tggaatagct
     3301 ttaattctga taggtaagta accgagctga tgcaattgtg caatatgttc gccagagtcc
     3361 tcaatattca atgtgtcaga aataaattga gtatattcag aaacaacgtc atgttgtgag
     3421 cgagaaaaaa aattatcgtt aaaataatga atcaagtatt ttaaaataaa tgcctgaaag
     3481 ccaaatgata caacacgtgt aacaaatgga gcataaatat tactacgagg tgtgaatgta
     3541 ctatataaaa actgagaacc ttcaggatat tgaattcgat gtgaagtttt ataaaaatca
     3601 cataatagtg atggtattgc agttgaatta atttttttac ccaaaatact atccattttc
     3661 ttaaagtcct tatt
//
LOCUS       DANLTI010000181         3615 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.183, whole genome shotgun sequence.
ACCESSION   DANLTI010000181 DANLTI010000000
VERSION     DANLTI010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.183"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            88..1011
                     /gene="oppB"
                     /locus_tag="PXB09_002537"
     CDS             88..1011
                     /gene="oppB"
                     /locus_tag="PXB09_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDL5234591.1"
                     /translation="MLKFIFKRLLEAIPTLLILITFSFFLMRLAPGSPFTSEKAYPPK
                     VMANIEAKYHLNEPLYKQYFLYMENLSKGDFGPSFKYKDQSVNNLIASAFPVSIKLGI
                     TAFIFAVLIGLTAGTIAALKQNSKWDYLVMGFSMTGIIMPSFVFAPLLVLMFAIYLKW
                     LPAGGWNGGQLYYMVLPVLSLTISYVAGIARITRGSMIEVLHSNFIRTAKAKGLPMRK
                     IIFKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGTLTILFNAIVDILYAVIDPKIRYS"
     gene            1026..1925
                     /gene="oppC"
                     /locus_tag="PXB09_002538"
     CDS             1026..1925
                     /gene="oppC"
                     /locus_tag="PXB09_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDL5234592.1"
                     /translation="MQNSSKNQPLVEVTSTIQGRSLWQDARRRFFRNKAAVASLIILC
                     CIILFITFAPMLMPFSYEDTDWNMMGIAPDFESQHYFGTDSSGRDLLVRVAIGGRISL
                     MVGIAGALIAVLIGTIYGAISGYFGGKVDMVMMRFLEILSSFPFMFFVILLVTFFGQN
                     IFLIFIAIGMVAWLNLARIVRGQTLSLKNKEFVEAAIVCGVSRRQIIWRHIVPNVLGL
                     VVVYASLEVPSLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMETSPWLLAFPAFFL
                     CLTLFCFNFIGDGLRDALDPKDK"
     gene            1935..3530
                     /locus_tag="PXB09_002539"
     CDS             1935..3530
                     /locus_tag="PXB09_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5234593.1"
                     /translation="MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGS
                     GKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTLSEKAMQTVRGDRIGMIFQEPMT
                     SLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG
                     QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLR
                     LVHKYSDLVCVMQNGEIIERGETETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLL
                     QGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGESGSGKSTLGRAIMQ
                     ILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVH
                     CPQMSKTERREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLD
                     EPTSALDRSTQITVIELLNRLQKKYGLSYIFISHDLAVIKALSDRVIVMSQGEIVESG
                     DVTQIFENPQQEYTKRLILASNL"
BASE COUNT          989 a          723 c          785 g         1118 t
ORIGIN      
        1 aaatagccat aactaatcaa tatctttaca aagccgttaa tttacgctat taattgccta
       61 ccaatataac taaaaagagt ggtgcttatg ctgaagttta tttttaaacg tcttcttgag
      121 gcgattccaa ccctactaat tctgattacc ttttcctttt tcctgatgcg gcttgccccg
      181 ggtagcccat ttaccagtga gaaagcctat ccgccgaaag taatggcaaa tatcgaggca
      241 aaatatcacc tgaatgaacc gctgtataag cagtattttc tttatatgga aaatctgtca
      301 aaaggcgatt tcggtccatc ttttaaatat aaagatcaat cggtaaataa tctgattgct
      361 tctgcgtttc ctgtttcgat aaaactgggc attactgcct ttatttttgc ggtgcttatc
      421 ggtttaaccg caggaactat cgctgcactt aagcaaaata gtaaatggga ttatttagtg
      481 atgggctttt caatgacggg tattattatg ccgagctttg tctttgctcc gctgttggta
      541 ctcatgtttg cgatttatct caaatggttg cctgccggtg gttggaacgg tggtcagctc
      601 tactatatgg ttttacctgt tctctcttta accattagct atgttgccgg cattgcccgt
      661 attactcgtg gttcaatgat tgaggtgttg cactctaatt ttattcgcac cgctaaggca
      721 aaaggcttgc caatgcgtaa aattattttc aaacacgctt tgcgtccggc attgttgcct
      781 gtgatcactt atttaggccc ggcttttgtt ggcattatta ccggctcgat ggtaattgaa
      841 agcgtgtttg gcttaccggg aatcgggcag ttgttcgtaa acggagcatt aaatcgtgac
      901 tattcattag tattaagcct aaccattttg gtaggtacgc tcaccatttt atttaatgcg
      961 attgttgata ttttatatgc ggtcatcgac ccgaaaattc gttattcata ggagtaaagc
     1021 ggaaaatgca aaattcttca aaaaatcaac cgcttgttga ggttacctca accattcaag
     1081 gacgaagttt atggcaagat gcacgccgcc gttttttccg aaataaggcg gctgtggcaa
     1141 gtttgattat tctttgttgt attattcttt ttattacctt tgccccaatg ctaatgccgt
     1201 ttagctatga agataccgat tggaatatga tggggattgc tccggatttt gaatctcaac
     1261 actatttcgg tactgattct tcagggcgtg atttgctggt tcgagttgca atcggtggac
     1321 gcatttcgtt aatggtaggg attgccggtg cattaattgc ggtgcttatc ggtacaatct
     1381 atggagcaat ttccggttat ttcggcggta aagtcgatat ggtgatgatg cgttttctgg
     1441 aaattttaag ctcattccca tttatgttct tcgtaatttt gctggttacg ttcttcgggc
     1501 agaatatttt cctgattttc attgcaatcg gtatggtagc gtggctgaac cttgcccgta
     1561 ttgtacgtgg tcaaactctt tcgcttaaaa ataaagagtt tgtggaagca gcgattgtgt
     1621 gtggcgtttc ccgccgtcaa attatttggc gacacattgt gcctaacgtt ttaggcttag
     1681 tggtggttta tgcctccctt gaagtaccat ctctgatttt gtttgaatcg ttcttaagtt
     1741 tcttagggct tggtacacaa gagccgatga gcagttgggg ggcattatta agcgacggag
     1801 cggcacaaat ggaaacctcg ccttggctac tggctttccc tgcctttttc ttatgtttaa
     1861 cactgttttg ttttaatttt attggtgatg gcttgcgtga tgccctcgat ccaaaagata
     1921 aatagaggtt tagaatggaa ttattagcag taaataatct cgatgtttat ttaaaaacgg
     1981 acgaagaatt agttcacgca gtgcgtaatg tctcgttctc gattgaaaaa gggcaaaccc
     2041 ttgcgattgt gggggaatcg ggttcgggta aatccgttac ttcaatggca attatgcagt
     2101 tattgcctaa aaatatcgtc tcattcggtg aacgctcaag catcattttt gaagaacaaa
     2161 acttgcttac tctatctgaa aaagcaatgc aaacagttcg aggtgatcgc atcggtatga
     2221 ttttccaaga gccaatgacc tcactcaatc cttatatgcc gattggcaag caggttgctg
     2281 agacggttca aacccataat ccgcaaatca gcaatgccga agcggaaaaa atggtgttgg
     2341 aaactttgca aaaagtaaaa attcccgatg cggaaaagaa aatgatttgc tatccgcacg
     2401 agttttccgg cggtcagcta caacgaatta tgattgcaat ggcaattatc aacaaacccg
     2461 atttattgat tgccgatgag ccgaccaccg ccctggatgt cacaacccaa gcggaaattt
     2521 tggatttaat gcacgactta cagcgtgata tgggaatggc gattatctta atttcccacg
     2581 atttacgctt ggtgcataaa tacagtgact tagtctgcgt aatgcaaaac ggcgaaatta
     2641 ttgagcgagg cgaaacggaa actgtgttca ccaatccgca acatccttat acggtggagc
     2701 tacttacccc gattccaact aatttaaaag gggaattacc gccaaatgca ccaaccttgc
     2761 ttcagggtga gcatattaag gtagattata ttttaaaacg ctcgctattc ggtaagccga
     2821 aaaaggtgtt taatgcgtta aaagatattt cattgcactt gaaaaccggc gaaacgctcg
     2881 gcattgtagg cgaatccggc tccgggaaat ctacccttgg gcgtgccatt atgcagattt
     2941 tagattatcg cggcaatatt acatttgcag gtaagacact ggctaatctg aataaagccg
     3001 aacgtcaagc cctgaaaaaa gatatgcaaa tggtgttcca agacccgttc aactcacttt
     3061 ctcctcgctt aacagttggg gaaattattg ctgagggctt aaccgtacat tgccctcaaa
     3121 tgagcaaaac cgaacggcgg gaaaaagtaa tgaaaatgtt ggaagaggtt aatctcaacc
     3181 ctgcaatgat taaccgctat ccgcacgaat tttcgggcgg acaacgccag cggattgcga
     3241 ttgcaagggc aatcatttta gagccgaaat ttgtattgct tgatgagcca acctcagcac
     3301 ttgaccgctc tactcagatc actgtaattg aattgcttaa ccgcttacag aaaaaatacg
     3361 gcttaagtta tattttcatc agccacgatt tggcggtcat caaggcactt agcgaccgag
     3421 tgattgtaat gagccaaggt gagattgtag aaagcggtga tgtcactcaa atttttgaaa
     3481 atccacaaca agaatacacc aagcggttga ttttagcctc taatttgtaa ccccttccac
     3541 aaggtcttat tctaccaaaa aacaagacct tgtcatttta tgctagcaaa acattgtaat
     3601 tttgatattt tattt
//
LOCUS       DANLTI010000182         3537 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.184, whole genome shotgun sequence.
ACCESSION   DANLTI010000182 DANLTI010000000
VERSION     DANLTI010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3537
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.184"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..895)
                     /locus_tag="PXB09_002540"
     CDS             complement(<1..895)
                     /locus_tag="PXB09_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chain length determination protein"
                     /protein_id="HDL5234594.1"
                     /translation="MADSVKSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGI
                     YAFTAKEQWTSKATVIAPKLTELGEYLNVRREYSRILRVDPVDPNALSASLFNNFNRL
                     AQSQDTKNEFFITSNVYKTLAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRT
                     LSFSAETPMEAQDTLGKLVQFINSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSV
                     NKSVQLENLNKAYETAQKAGIKEYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYL
                     FMLGEKYLKAQIDVANEKGVVY"
     gene            1044..1385
                     /gene="erpA"
                     /locus_tag="PXB09_002541"
     CDS             1044..1385
                     /gene="erpA"
                     /locus_tag="PXB09_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDL5234595.1"
                     /translation="MSDIQIPLIFTDAAARKVKSLIEGEENPNLRLRVYITGGGCSGF
                     QYGFTFDDQVNEGDLTIENQSVGLVVDPMSLQYLIGGTVDYTEGLDGSRFVVNNPNAS
                     STCGCGSSFSI"
     gene            complement(1490..1813)
                     /gene="yidD"
                     /locus_tag="PXB09_002542"
     CDS             complement(1490..1813)
                     /gene="yidD"
                     /locus_tag="PXB09_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDL5234596.1"
                     /translation="MVKTHSPEQKAGTTESINQPPRLSLLAKILLLPIYFYRYAISPL
                     IGPRCRFYPTCSTYAVEAIKIHGAIKGGYLAFKRILRCNPLSEGGEDPVPLCCKGNCK
                     HNDKK"
     gene            complement(1762..2136)
                     /gene="rnpA"
                     /locus_tag="PXB09_002543"
     CDS             complement(1762..2136)
                     /gene="rnpA"
                     /locus_tag="PXB09_002543"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDL5234597.1"
                     /translation="MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTLLARENNLEN
                     PRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHELPNFDFVFVAKGGIGKLDNATLF
                     ETLEKLWSRHIRLSKKPAQQNP"
     gene            complement(2172..2306)
                     /gene="rpmH"
                     /locus_tag="PXB09_002544"
     CDS             complement(2172..2306)
                     /gene="rpmH"
                     /locus_tag="PXB09_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDL5234598.1"
                     /translation="MKRTFQPSVLKRARTHGFRARMATKNGRQVLARRRAKGRKSLSA
                     "
     gene            2543..3505
                     /gene="hemH"
                     /locus_tag="PXB09_002545"
     CDS             2543..3505
                     /gene="hemH"
                     /locus_tag="PXB09_002545"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDL5234599.1"
                     /translation="MNQPQQIGILLANLGTPDEPTPSAVKRYLKQFLSDPRVIDLPKF
                     KWQAILNCIILPRRSPKVAKLYQSVWSEEGSPLLAISRQQQRAVQRYFDAKGKNVVVE
                     LGMSYGNPSIESATDNLIKQGVERIIVLPLYPQYSSTTTASVFDAFANGLKAQRKIVP
                     FDFIHSYHNDPLYIQALANSIDVKPDELLLFSFHGIPKRYETEGDFYAKHCQETAELV
                     AEKLGLPREKWYLSFQSRFGDEEWLQPYTDQTLESFPQKGIKKVAVVCPGFSADCLET
                     LEEITEENRENFEHAGGESYRYIPALNASGDHIKALVKLIEAKI"
BASE COUNT         1076 a          680 c          697 g         1084 t
ORIGIN      
        1 gataaacaac acctttctca ttagccacat caatttgagc ctttaggtat ttttccccta
       61 acataaataa atatgaacta tctgctaatt ttgaatcaga aagggagatt ttagtatcac
      121 ttaaagctgc tgcaatattt gatgcatctg attgattaaa tgcttttgaa tattctttaa
      181 tacctgcttt ttgtgcagtt tcataggctt tatttaagtt ttccaactga accgacttat
      241 tcacagataa atcttcctga attaatgatt tttcatattg taatgcagta agcacatttt
      301 ggaaatcgac tagaaaatct tctaattcaa cagcaaatgc tttgctatta atgaattgaa
      361 ccaacttacc aagggtgtcc tgcgcctcca taggtgtctc tgcagaaaaa gatagtgtac
      421 gacctattgc attaggatct ttctttgcat caggaataat aaagctggta ttttcattac
      481 tcaaattgga taaaactgtg cgttgcccct gctcatcttt tccttcagct aacgtcttat
      541 acacattgga agtgataaaa aattcatttt tagtatcttg agattgtgct aatcggttaa
      601 aattgttgaa caaactcgca gacaatgcat ttggatcaac aggatctaca cgcaaaatcc
      661 gactatattc tctgcgaaca tttaaatact cacctaactc tgttaattta ggggcaataa
      721 ctgttgcctt agacgtccat tgctcttttg cagtaaatgc ataaatacca gcaagtaatg
      781 tggtaatgaa tgttgttata acaatccacc attttttatc ccatagagca cgaaaaatct
      841 caattaaatc aatctcatcc gagctttgct catgactttt tactgaatct gccatagttt
      901 cctctaaaat ttgcatgttt ctgtacagca ttatacataa ttttcttatt tccactgcat
      961 tcatttactc ttttttaaga ttgcacttcc tatgtaatta ttagataata tccaatcaca
     1021 gtaaaatttt gatctaaaac aaaatgagcg atattcaaat tcctttaatc tttactgatg
     1081 cggcggctcg taaagtaaaa agcttaattg agggcgaaga gaacccgaat cttcgcttgc
     1141 gtgtgtatat tacgggtggg ggctgtagtg gattccagta tgggttcacc tttgatgatc
     1201 aagtcaatga gggagacctt accattgaga atcaaagcgt tggcttggtg gttgacccga
     1261 tgagcctaca atatttaatt ggtggcacgg tggattatac cgaagggctg gacggctcac
     1321 gttttgtcgt gaataatcca aatgcaagct caacctgtgg ttgtggttct tcctttagca
     1381 tttaattcac tcgaattatt gccttattca atatcagtct cacaagtaaa ttttttacta
     1441 aaaatgaccg tttgtattaa acaaaatagc ctaacttatt gagtttaggc tattttttat
     1501 cattatgttt gcagttgcct ttacaacaaa gtgggacagg atcttcgcct ccctcactca
     1561 aagggttgca acgcagaata cgcttaaacg ctaaataccc acctttaatt gctccgtgga
     1621 ttttaatcgc ttcgaccgca taggtggagc aggttgggta aaatcggcaa cgtgggccaa
     1681 tcaatgggct gatagcatag cgatagaaat aaatcggtag caatagaatt ttggctaata
     1741 ggctgagacg aggtggctga tttatggatt ctgttgtgcc ggctttttgc tcaggcgaat
     1801 gtgtcttgac catagttttt ccaatgtttc aaacagcgtt gcgttgtcta atttgccaat
     1861 gccgcctttt gccacaaata caaaatcgaa attcggcaat tcgtgttgct tgaggcgaaa
     1921 actttcacgc actatccgct taatgcgatt acggtcgtga gcccgtttta aatgtttttt
     1981 ggcaacagtt aagcctagac gaggattttc tagattattc tctctagcaa gaagagtcat
     2041 ttggggtgtg ctggctcgaa gtggctcttc aaacaccgcc ttaaattgaa cgggagctaa
     2101 caaacgtagc tcccgagaga aatttagctt cttcacactt aatcagaaag gtgttttggc
     2161 tggttctgca attatgcaga taaagattta cgacctttag cacgacgacg cgctaacact
     2221 tgacgaccgt ttttagtagc catacgagca cggaaaccgt gagtacgagc acgttttaat
     2281 actgatggtt gaaatgtacg tttcattgct tatctaccta aaatttaaaa agttggcata
     2341 aaatggtttc tgccaaacaa ggaccataaa aaagagttgc aattctacag gcaattaaaa
     2401 taaaaagcaa gaaacaatcc aagcacaact cgggttgttt gcaaaatttt tgaaaaatac
     2461 gaccgcttgt tataatcgca gaaatttata ttggtttgtg gcataatcga aaaaatatta
     2521 actattgatg agaaatagaa caatgaatca accccaacaa ataggtattt tgctggctaa
     2581 tttaggtacg ccagatgaac ccacgccaag tgcggtgaag cgttatttaa agcaattttt
     2641 aagcgatcct cgtgtgatcg atctaccaaa atttaaatgg caagcaatcc taaactgcat
     2701 cattttgcca agacgttcgc caaaagtggc aaaattatat caatcagtat ggagcgaaga
     2761 aggctcaccg ttattggcga tttctcggca acaacaacga gcggtacaac gctattttga
     2821 tgccaaaggc aaaaatgtgg tggtggaatt gggaatgtct tacggcaatc caagtattga
     2881 aagtgcgacc gataacctca tcaagcaggg ggttgagcgg attattgtgc taccgcttta
     2941 tccgcaatac agtagcacta ctaccgcttc ggtgtttgat gcgtttgcca acggtttaaa
     3001 agcacagcgt aaaatcgtgc cgtttgattt tattcacagc tatcataacg atccgcttta
     3061 tattcaagcg ttggctaact ctattgatgt taaacctgac gagttattac tgttttcatt
     3121 tcacggcatt cctaaacgtt atgaaacgga aggtgatttt tacgccaagc attgccaaga
     3181 aacagcagaa ttagtggctg aaaagctagg tctgccaaga gaaaaatggt atttgtcttt
     3241 ccagtcccgt tttggtgatg aagagtggct acagccttat accgatcaaa cccttgaaag
     3301 cttcccacaa aaagggataa aaaaagtggc tgtcgtttgc ccgggctttt cagcagattg
     3361 tttggaaacc ttagaagaaa ttacagaaga aaaccgcgag aactttgaac atgccggcgg
     3421 agaatcttat cgctacattc cagcgttaaa tgcgagtggc gatcatatca aggcattagt
     3481 aaaattaatc gaagcgaaaa tataatataa tttgggcgga taataaatcc gcccatt
//
LOCUS       DANLTI010000183         3364 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.185, whole genome shotgun sequence.
ACCESSION   DANLTI010000183 DANLTI010000000
VERSION     DANLTI010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.185"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..633)
                     /locus_tag="PXB09_002546"
     CDS             complement(<1..633)
                     /locus_tag="PXB09_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL5234600.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAVFAKSAKVRSTLNQRDKYSNDLPYIRFVKSIQTCQC
                     RDGKYCHTEKVLVENKNGAVQLCWHHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSTAIEFADLVLFASIKGLLDELDSKALQQFLGYPPLNNSGVSKES"
     gene            complement(760..1353)
                     /locus_tag="PXB09_002547"
     CDS             complement(760..1353)
                     /locus_tag="PXB09_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5234601.1"
                     /translation="MTDFDKNTYQTPNYVRNWLNHRYAWFHIDGCSNGQNTLYTYWIG
                     RAADGLDDDKLSCQIADDFLADDLFDVLLDKVSDWGELLRIFVNPPYSDPLPFVQRAA
                     ELKKAGHLVVMLLPADKTTEWYTIIQQHANEVIDIIGYHDEKGTWRTGRIQFINPVTG
                     KPAQGNNKGSMIVVFDPFIEGIVTRQMPLDKIKEWGK"
     gene            complement(1364..2410)
                     /locus_tag="PXB09_002548"
     CDS             complement(1364..2410)
                     /locus_tag="PXB09_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /protein_id="HDL5234602.1"
                     /translation="MRFTSTINNVRLVEWEINITQGALVDLINQASSWAKAVVIDGIT
                     YYWMSFSKVCEELPAVFSKEDTVYRQYKVLKEKGIIDHFKMDGKDYVRLTEKGCEWNK
                     FEPIRESEKNPSIGNNSEQTRKNFRESSEKNPTDNNTNYKNNNDHTTPLNPPAGEPAP
                     AEVVLNYLNSALVTLAVQLGERKPVGYSLKPWAKNITARIRESSVADCCQVVDYLVAK
                     WGRDEKMREYLCPKTIFRQSNFADYFPKSTAWANNGKPVCVNGKWVTPAELEKRLIMP
                     TVDEVRALFQKSLSGNPFKALDFTNKRNLVMYHATINTRNKRPLERDLPMIISQEIKN
                     AVERIDRLRVPTFS"
     gene            complement(2407..3090)
                     /locus_tag="PXB09_002549"
     CDS             complement(2407..3090)
                     /locus_tag="PXB09_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDL5234603.1"
                     /translation="MNQLLNISAPKASITMSSREIAELCEKEHRHVTRDIEAMFSQLD
                     IPAEGYAHFWTHPQNGQTYREFRLPYDLTLTLISGYSVILRKKIIDRWQELESRQGIP
                     QSFSQALRLAAEQQEVIEQQNHQLAIQAPKVAFVEHYVEVGTTKSLRETAKILNFPEK
                     RLIECLERYRVLYRQSGNLLPYQDKQAKQLFAVKTGTAEHGHNFTQTRVTAKGIEWIA
                     QRYASELGQ"
     gene            complement(3148..3336)
                     /locus_tag="PXB09_002550"
     CDS             complement(3148..3336)
                     /locus_tag="PXB09_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL5234604.1"
                     /translation="MKKDDVLEHFGTLEKVAATLGISVSAVSQWGEIIPEKNAYRLQE
                     ITAGKLKVKHSLYRNRSK"
BASE COUNT          886 a          764 c          634 g         1080 t
ORIGIN      
        1 actttctttg ctcacaccgc tattattcag tggtggatag ccgagaaact gctgtaatgc
       61 cttgctgtct aattcatcaa gcaaaccttt gatactcgca aacaacacta agtccgcaaa
      121 ttcaatagcg gtagattgcg ttttgcgtaa ggttaagcgg atttgttggg cgataaattt
      181 ttcccagttt tcatccgcta gtgcttctaa tttttcattc gggatttcac cgtccattcg
      241 cattttgtcg tgatgccaac aaagctgtac cgcaccgttt ttattctcta ccagcacttt
      301 ttccgtgtgg caatatttgc catctcggca ttggcacgtc tgaattgact ttacaaaccg
      361 gatataaggc aaatcattac tatatttgtc acgctgattt agcgttgaac gaacttttgc
      421 cgatttagca aacaccgcca gctctttaca agcggtcgaa tttgccgaaa aatttgcaac
      481 cttgcctgat ttaaccgtcg ctaaatcggt cggtgcaggt tgcaacaaag ttcgctcacc
      541 gaaagcagca ggagaaacat ctttaggcac tttgtaaaac acaataccca cttcggtttg
      601 aaagtaaggg gtaagtagca aaccttccgc cattattgcc cccatttctc ggtttcatca
      661 taggctttca cgaatagcat aaatacgcca atacagatta aaaaaatcag tacgccaatt
      721 actgcaccaa taccaataaa tagttcccaa taatccattt tatttacccc attccttgat
      781 tttatctagt ggcatctgac gagttacaat gccctcaata aatgggtcaa acacaacaat
      841 catcgagcct ttattattac cttgtgccgg tttacctgtt accgggttga taaattgaat
      901 ccgccctgtc cgccaagtgc ctttttcatc gtgatagcca ataatatcaa ttacctcatt
      961 agcgtgttgt tgaatgatgg tgtaccattc tgttgtttta tccgctggta ataacatcac
     1021 aaccaaatga cctgcttttt tcaattctgc cgctcgttga acaaaaggca gtggatcaga
     1081 atatggcgga ttaacgaaaa tacgcagtaa ttctccccag tctgaaactt tatctagtag
     1141 cacatcaaat aaatcatcgg ctaaaaaatc atcggcaatt tggcaactta atttatcatc
     1201 atctaaaccg tctgccgctc taccaatcca ataggtgtac aacgtatttt gtccgttaga
     1261 gcaaccgtca atatgaaacc aagcataacg atgatttagc caattacgca cataattagg
     1321 tgtttggtaa gtgtttttat caaaatctgt cattgtctaa tccttacgaa aatgttggta
     1381 ctctcaaacg gtcgatacgc tcaaccgcat ttttaatttc ttggctgata atcatcggca
     1441 aatcacgttc aagtggtcgc ttgtttctgg tgttgattgt ggcgtggtac atcactaaat
     1501 ttcgtttgtt ggtaaagtcc aatgccttaa acggattgcc actgagtgat ttctggaaca
     1561 aggctcgtac ttcgtccacc gttggcataa tcaagcgttt ttccagctcc gccggtgtaa
     1621 cccacttacc atttacgcaa acaggctttc cgttattagc ccaagcggtc gattttggaa
     1681 aataatctgc aaaattcgat tggcggaaaa tcgttttcgg gcagaggtat tcacgcattt
     1741 tttcatctcg tccccattta gcgacaaggt aatccaccac ttggcaacag tccgccaccg
     1801 aactttcacg aatgcgagca gtaatatttt ttgcccacgg cttgagcgaa taccccacag
     1861 gcttacgctc accaagctgt accgccaacg ttaccaaagc cgaattgaga taattcaaca
     1921 caacttcagc cggggcaggt tcccccgctg ggggattaag gggggtagta tgatcattat
     1981 tatttttata attagtatta ttatctgtcg gatttttttc cgagctttct cggaaatttt
     2041 tccgagtttg ttcggagtta tttccgatac tcggattttt ttccgactca cggatcggct
     2101 cgaatttatt ccattcacaa cctttttcgg ttaaacggac ataatcttta ccgtccattt
     2161 tgaagtggtc gataatgcct ttttctttca acaccttata ttggcggtaa actgtatctt
     2221 ctttgctaaa aaccgcaggt aactcttcgc aaaccttgct aaatgacatc cagtaatagg
     2281 ttatgccgtc aataaccacc gctttcgccc aactggaggc ttgattgatt aaatcgacca
     2341 atgccccttg tgtaatattg atttcccatt ccactaagcg gacattgttt atggttgatg
     2401 taaatctcat tgtcctaact ccgatgcgta acgttgagca atccattcaa tccctttggc
     2461 ggttactctc gtttgggtaa aattatgacc gtgttctgcc gtgccggttt ttactgcaaa
     2521 aagctgttta gcttgtttat cttgataagg gagtaggttt cctgattggc gataaagaac
     2581 tcgatatcgt tctaaacatt caatcaaccg cttttctgga aaattgagta tcttggcggt
     2641 ttctcgcaat gatttagtcg ttcccacctc aacataatgc tccacaaatg cgactttcgg
     2701 ggcttgaatg gctaattgat gattctgctg ctcaatcact tcttgctgtt ctgccgccaa
     2761 ccgtagagct tgagagaaag attgtggaat accttgtctg ctttctagct cttgccaacg
     2821 gtcgataatt ttcttgcgaa gtatcacgct atagccggaa attagggtaa gggttaaatc
     2881 gtaaggcaat cgaaattccc ggtatgtttg cccattttga gggtgtgtcc aaaaatgggc
     2941 atacccctcg gcaggaatat ctaattgact aaacatcgct tctatatcac gagtaacgtg
     3001 tcgatgttct ttttcgcaca actcagcaat ctcacgacta ctcatcgtaa tgcttgcttt
     3061 tggtgccgaa atgtttaata attgattcat cgaaaatacc tttcgtgttt aattatgtat
     3121 gaaagccacc gttacagcgg tggtttttta tttgcttcta tttctataaa gtgagtgttt
     3181 gacctttaac ttgccggcag tgatctcttg taatctgtac gcatttttct caggaataat
     3241 ctcgccccat tgagaaacag cagatacact aatccctaaa gttgccgcca ctttttctag
     3301 agttccgaaa tgttcgagca catcatcttt tttcatattt tcttaattcc tttcttgaat
     3361 ttta
//
LOCUS       DANLTI010000184         3264 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.187, whole genome shotgun sequence.
ACCESSION   DANLTI010000184 DANLTI010000000
VERSION     DANLTI010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.187"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..844
                     /locus_tag="PXB09_002551"
     CDS             <1..844
                     /locus_tag="PXB09_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5234605.1"
                     /translation="AGVLFACINTLIPKLTSISPIDSNVIALVQYLAAFIFLVPSMNN
                     IGFFSSLKTEHFGQHCFRIFLSAIGIQCWTMALANQLPIWQGIALLMTSPLFVTIGSG
                     LFLKEKVDKKRWIATAMGFVGAMIILEPWSDHFEMIALLPIAAAFFWAGYSLMVKKLS
                     RYDSPTTMVAYLFILITPFNLLIALTNLSPSGFSLPSWSDFGFLILLGFFTALAQLAV
                     AKAYSVADASYIQPFDFIKLPLNVLAGWLVFNWVPPGKLWLGAAIIIAATIYITHAET
                     KQSN"
     gene            complement(923..1414)
                     /gene="ilvN"
                     /locus_tag="PXB09_002552"
     CDS             complement(923..1414)
                     /gene="ilvN"
                     /locus_tag="PXB09_002552"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDL5234606.1"
                     /translation="MRRTLAVLLENESGALSRVVALFSQRGFNIESLTVAPTDDPSLS
                     RMTIVAQGEEQVLEQIEKQLHKLIDVFKVSNLSAYEHVEREVLLVKVRATGSSRDELK
                     RMVDIYRGQIVDLTPKLYTIQLSGSTEKLNAFIEAVKEETTIVEIVRSGVISLSRGDK
                     NAL"
     gene            complement(1407..3128)
                     /locus_tag="PXB09_002553"
     CDS             complement(1407..3128)
                     /locus_tag="PXB09_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDL5234607.1"
                     /translation="MKKLSGAEMIVQSLKDEGVEYVFGYPGGSVLDIYDAIHTLGLNH
                     VLVRHEQGAVHMADGYARSTGKVGCVLVTSGPGATNTITGILTAYTDSVPLVILSGQV
                     PSSLIGTDAFQESDMIGISRPVVKHSFLVKNTEEIPEIIKKAFYIASTGRPGPVVIDI
                     PKDVVNPLNKYPYEYPQEVSMRSYNPTVQGHKGQIKKALKALLVAKRPVLYVGGGVIS
                     AEGSPEITEFAQKLNLPVTCSLMGLGAYPASDKQYLGMLGMHGTFEANNAMHESDLIL
                     GIGVRFDDRTTNNLAKYCPNAKVIHVDIDPASISKTVQAYIPIVGSAKDVMEEFLSLL
                     GEENLAKNQVDLTAWWQQIDAWKARNCLAFEENSDVIKPQQVIRMIHKLTNGEAYVAS
                     DVGQHQMFAALHYGFDKPRRWINSGGAGTMGFGLPAAMGVKFAHPDATVVCVTGDGSI
                     QMNIQELSTAKQYDTPIVIVSLNNRFLGMVKQWQDIIYSGRHSQVYMNSLPNFAKLAE
                     AYGHVGIQIDHPSELEAKLTEAFSIKDKLVFVDVLVDETEHVYPMQVRGGAMNEMMLS
                     KTERTDA"
BASE COUNT          900 a          700 c          610 g         1054 t
ORIGIN      
        1 tgccggtgtg ttatttgcct gtatcaatac cttaattccc aaattaacgt ccatttcacc
       61 gattgactcg aacgtgattg cattggtgca atatttagct gcctttattt tcctcgttcc
      121 cagcatgaat aatatcggtt tcttctcttc attaaaaacc gagcattttg ggcaacactg
      181 tttccgtatt tttctatctg cgattggtat tcaatgttgg acaatggcac tcgctaacca
      241 attacctatt tggcagggaa ttgcgttatt gatgacttct ccattgtttg tgaccatcgg
      301 ctccggtctg tttttgaaag agaaagtgga taaaaagcgt tggattgcaa ccgcaatggg
      361 gtttgttggg gcgatgatta ttctagagcc ttggagcgat cattttgaaa tgattgcgtt
      421 actgccgatt gccgcggctt ttttctgggc aggttattcg ctaatggtga aaaaactctc
      481 tcgttacgat agcccaacta cgatggtcgc ttacctgttt attctaatta cgccttttaa
      541 tttgttgatt gcactcacga accttagccc tagtgggttt agtctgcctt cttggagcga
      601 tttcggcttt ttaatcttac ttggtttctt tacggcgtta gcgcaactgg cggtagccaa
      661 agcctacagt gtagcagatg cttcctacat tcagccgttt gattttatta aattaccttt
      721 gaacgtatta gccggttggc ttgtatttaa ctgggtgcca ccgggtaaat tatggctagg
      781 agctgcgatt attattgctg cgaccattta tattactcac gctgaaacta aacagagtaa
      841 ttagcaacaa attcacgcta cataaaaatc cctttatctc aaagataaag ggatttgcaa
      901 attttaagct aaaattgacc gcttacagag cgtttttatc gccacgagat agactaatca
      961 cgccagagcg aacaatctct acaatcgttg tttcttcttt aactgcctca ataaatgcat
     1021 tgagcttctc ggtagaaccg gataattgaa tggtgtaaag tttcggtgtt aaatctacga
     1081 tttgcccacg gtaaatatct accatacgtt tcagttcatc acgagatgaa cctgtagctc
     1141 gcacttttac caataacact tcacgctcaa cgtgttcata agcacttaag ttactcactt
     1201 taaacacatc aatgagtttg tgtagttgct tttcgatttg ttctaacacc tgttcttcgc
     1261 cttgcgcgac aattgtcata cgggaaaggc ttggatcatc agtaggggca acggtcaagc
     1321 tttcaatgtt aaaaccacgc tgcgagaaaa gggcaactac acgagataat gcacctgatt
     1381 cattttctaa taatacggct aatgttctac gcatctgttc tctccgtttt acttaacatc
     1441 atttcattca ttgctcctcc acgcacttgc attgggtaaa catgttccgt ttcatcgacc
     1501 aatacatcaa caaatacaag cttatcttta attgagaatg cctcagttaa ttttgcctcc
     1561 aattcagaag ggtggtcgat ttgaatccca acgtggccat aagcctctgc taatttagca
     1621 aagttaggta gagaattcat atacacctgt gaatggcggc cagagtaaat aatatcttgc
     1681 cactgtttca ccatacctaa gaaacggtta tttaagctga caatcacaat cggtgtgtcg
     1741 tattgctttg cggtggaaag ttcctggata ttcatttgga tactaccatc accggttaca
     1801 caaacaacag tggcatcagg gtgggcaaat tttaccccca tcgcagcagg taagccaaag
     1861 cccattgtgc ctgcaccgcc tgaattaatc caacgacgtg gtttatcgaa cccataatgc
     1921 aatgcagcaa acatttgatg ttgtccaaca tctgaggcaa cataagcctc cccattggtc
     1981 aacttgtgga tcattctaat cacttgttgt ggcttaatca catcactgtt ttcttcaaag
     2041 gctaagcaat tacgagcttt ccaagcatca atttgttgcc accaagcggt taaatctacc
     2101 tgattttttg caagattttc ctcacctaat aaagataaaa attcttccat tacatcctta
     2161 gcactgccta caattggaat ataagcttgt actgttttgg aaattgaggc tggatcaata
     2221 tccacgtgga tcacttttgc attcgggcaa tattttgcta agttatttgt tgtacgatca
     2281 tcaaaacgta ccccaatacc taaaatcaaa tcactttcgt gcattgcatt atttgcctca
     2341 aaagtgccgt gcatgcctaa catacctaaa tattgcttat cagaggcagg ataagcacct
     2401 aatcccatta atgaacaggt tacaggtaga tttagctttt gtgcaaactc tgtaatttct
     2461 ggcgaaccct ctgcactaat tacaccaccg cctacataaa gcactggacg ttttgctact
     2521 aatagtgctt ttaatgcttt tttaatttgc cctttatgcc cttgaactgt tgggttataa
     2581 gaacgcattg atacttcttg cggatattca tagggatatt tatttaatgg attgactaca
     2641 tctttaggaa tatcaataac taccgggcct ggtcgaccgg ttgatgcaat ataaaaggct
     2701 tttttgataa tttcaggaat ttcttctgta ttttttacta agaaactgtg ttttacaacc
     2761 ggacgagaaa tgccgatcat atcactttct tggaatgcat ctgtcccaat taaacttgat
     2821 ggaacttggc ccgacagtat tactaacgga acagagtcgg tataagcagt taaaatacca
     2881 gtaattgtat tcgttgctcc cggacctgaa gtcactagca cacagccgac tttacctgtt
     2941 gaacgggcat agccatcagc catatgtaca gcaccttgct cgtgtcgaac taaaacgtga
     3001 ttcaatccaa gtgtatgaat tgcatcataa atatcgagta cagagccacc cggatagccg
     3061 aaaacgtatt ctacgccttc atcctttaag gactgtacaa tcatttctgc accagaaagt
     3121 tttttcattg aatcctccaa caaaatagca ttttcttctc taagatggtt ggattttgca
     3181 gtaaaatttt attgatgtct agttcttatt atgggatcaa atgctagatt tgctagattt
     3241 atattctttt ttatcttaaa aagt
//
LOCUS       DANLTI010000185         3259 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.188, whole genome shotgun sequence.
ACCESSION   DANLTI010000185 DANLTI010000000
VERSION     DANLTI010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.188"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..117)
                     /locus_tag="PXB09_002554"
     CDS             complement(<1..117)
                     /locus_tag="PXB09_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDL5234608.1"
                     /translation="MKKLVLTILAAATFLTACNTVDGVGEDVEKAGDKIQQAA"
     gene            complement(197..1174)
                     /gene="rluD"
                     /locus_tag="PXB09_002555"
     CDS             complement(197..1174)
                     /gene="rluD"
                     /locus_tag="PXB09_002555"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDL5234609.1"
                     /translation="MTQQKILTAEITADLLGARLDQALAQLFPDYSRSRIKVWIESDL
                     VKVNGNIVNKAREKVFGGETVEITAEIEEEIRFEPQDIPLNIVYEDDDIIVINKPKDL
                     VVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT
                     ALQKRRITREYEAIASGIMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERF
                     RNYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQLYGGRPRPPKGASDSFLSVLRGFQR
                     QALHATMLRLEHPITGEMMEWHAPLPDDFIELIQALKADYELYKDQLDY"
     gene            1315..2094
                     /locus_tag="PXB09_002556"
     CDS             1315..2094
                     /locus_tag="PXB09_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDL5234610.1"
                     /translation="MRKFKSLATLVLAGLFVAGCSNSNKELEQSNVQDLYGKGQTYLQ
                     DGDYNSAIRYLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPN
                     AANMDYVFYLAGLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQY
                     AQDAQNWMNYLFNRLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPY
                     LKEAYKQMNIPDAEQKTELLIQEYESKELPNPEKLKYGEQF"
     gene            2167..3198
                     /gene="tsaD"
                     /locus_tag="PXB09_002557"
     CDS             2167..3198
                     /gene="tsaD"
                     /locus_tag="PXB09_002557"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDL5234611.1"
                     /translation="MRILGIETSCDETGVAIYDEDKGLVANQLYSQIDMHADYGGVVP
                     ELASRDHIRKTLPLIQEALKEANLQPSDIDGIAYTAGPGLVGALLVGSTIARSLAYAW
                     NVPALGVHHMEGHLLAPMLEENAPEFPFVALLISGGHTQLVKVDGVGQYELLGESIDD
                     AAGEAFDKTGKLLGLDYPAGVAMSKLAESGTPNRFKFPRPMTDRPGLDFSFSGLKTFA
                     ANTIKANLNENGELDEQTKCDIAHAFQQAVVDTILIKCKRALEQTGYKRLVMAGGVSA
                     NKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTGFLRLKNDEQTDLSISVKPRW
                     AMTELPPIN"
BASE COUNT          968 a          707 c          644 g          940 t
ORIGIN      
        1 tgcagcctgc tgaattttat cgcccgcttt ttcaacatcc tcaccaacac catcaacggt
       61 attacacgca gtcaagaaag ttgcagctgc taaaatagtt aatactaatt ttttcataga
      121 aagctccttt tttgttgttt acttatgaaa acgatttcaa tatagcaact ttacattatt
      181 taagcaacac ctaaacttaa taatctaatt gatctttata aagctcataa tccgctttta
      241 gtgcctgaat caattcaata aaatcatcag gtaacggggc gtgccactcc atcatttcac
      301 cagtaatcgg atgctctaat ctcaacattg tggcgtgtaa ggcttggcgt tggaagcctc
      361 gtaacaccga taaaaacgag tcactcgcac ctttaggtgg gcgaggtcta ccgccataga
      421 gctgatcacc taataatggg tgagcaatat gcgccatatg tacccgaatt tggtgagtac
      481 gccctgtttc taatcttaaa cgtaaacgtg tgtaattacg aaaacgctcc ataatacgat
      541 aatgcgtaac cgccggtttt cccattgggt gaacagccat tgccgtacgt ttagttgggt
      601 ggcgagccat tggctcatca acttttccgc cctgtgtcat aatgccgctg gcaatcgctt
      661 catattcacg ggtaatacga cgtttttgta atgcggttac taagtgagtc tgtgccggaa
      721 tgtttttagc cactaccatt aagcctgtcg tgtctttatc caatcggtga acaatccctg
      781 ctcgaggcac ttctgcaatc ggtggataat aatgtagcaa agcattcagc actgtaccgt
      841 ccggattacc agcccctggg tgaaccacta aatccttcgg tttattaatg acgataatat
      901 cgtcatcttc atacacaata tttagaggaa tatcttgagg ctcaaaacga atttcctctt
      961 ctatttcagc ggtaatttca acagtttcac caccaaatac tttttccctt gctttattca
     1021 cgatattgcc attaactttc actagatcac tttcaatcca cactttaatg cgtgaacgag
     1081 aatagtccgg aaaaagttgt gccagagcct gatctaggcg agcacctagt aaatctgcag
     1141 taatttctgc tgttaaaatc ttttgttgag tcattaaacc ataaatccta attagtcatt
     1201 tgcttacttg cgtgatgtta tatagaatag cgagatgaac ttcataagtt attcttagtc
     1261 agaggacatt gtacattaac ttttcgtcct agacactttt tataggtaaa acatatgcgt
     1321 aaatttaaat ctcttgccac attagtatta gccggactgt ttgttgcagg ttgttcaaat
     1381 tcaaataaag aattagaaca atccaacgtt caagatcttt atggcaaagg tcagacctat
     1441 ttacaagatg gagattataa ttctgccatt cgctacttag aagcggttgg aaccaaagga
     1501 ggccaatatt caggacttgg tgagcaaacc caactaagtt taatttatgc tcaatataaa
     1561 gttggcgaat actataaagc acttgatgcc gcagaacgtt ttgctcgctc ttacccgaat
     1621 gcagctaata tggattacgt attctatcta gcaggattat caaatgcacg tctaagtgat
     1681 aattttattc aagacttctt tggtgtaaat cgcgcctctc gagccgtaga taatgttcgt
     1741 aatgcttacg gtaacttcca aactattgta cagcgctacc ctcaaagcca atatgcacaa
     1801 gatgctcaaa attggatgaa ttacttattt aaccgtttag cggaacacga attagccgtt
     1861 gttaaatttt atgatgaacg taatgcctat gtggctgtag taaaccgtat cgaagaaatg
     1921 ttgcgttttt acccgaatac actggcaacc aaacaagcat tgccatactt aaaagaagca
     1981 tataagcaaa tgaatatccc agatgcagag caaaaaacgg aactcttgat ccaagaatat
     2041 gaaagcaaag agctaccgaa tcctgaaaaa ctgaagtatg gcgaacaatt ctagtcgtac
     2101 agagaataat gtgaggggcg ttcttcgccc cttttggttt tctaacttat tttgacttct
     2161 ccaactatgc gaattttagg tattgaaacc tcttgtgatg aaaccggtgt tgccatttat
     2221 gatgaagaca aaggcttagt ggcaaaccag ctttatagcc aaattgatat gcacgccgat
     2281 tacggtggcg tagtccctga actggcttct cgagaccata tccgtaaaac gttgccacta
     2341 attcaagaag ccttaaaaga ggccaatctg caaccctcgg atattgacgg cattgcctat
     2401 actgccggcc caggcttggt cggggcttta ttggtcggct caaccattgc ccgttcgctg
     2461 gcttatgctt ggaatgttcc ggcattgggc gttcaccata tggaagggca tttacttgcc
     2521 ccaatgttgg aagaaaatgc ccctgaattt ccgtttgtgg cattattgat ttcaggtgga
     2581 cacacccaac tggtaaaagt tgacggcgtt gggcaatacg aactactcgg ggaatcaatt
     2641 gatgatgctg ccggtgaagc ctttgacaaa acaggcaaac tactcggttt ggattaccct
     2701 gccggtgtag cgatgtcaaa attagccgaa tccggcacgc caaatcgttt taaattccct
     2761 cgtccaatga ccgacagacc gggactggat ttcagtttct ccggtttaaa aacctttgct
     2821 gcgaatacga ttaaagccaa tcttaatgaa aatggtgaac tcgatgagca aaccaaatgc
     2881 gatattgccc acgcattcca acaagccgtg gttgatacta ttttaattaa atgcaagcga
     2941 gcgttagagc aaaccggcta taaacgctta gtaatggcag gcggcgtaag tgccaataaa
     3001 caattacgag cagaccttgc ggaaatgatg aaaaaattaa aaggcgaagt attctaccct
     3061 cgcccacaat tttgcactga caacggcgca atgattgcct acactggctt tcttcgctta
     3121 aaaaacgatg aacaaaccga cttaagcatt agcgtaaaac cccgctgggc tatgaccgaa
     3181 ttaccaccga ttaattaacc tttcaagcgg tgaaatttct tgttaatttt gcaaaaattt
     3241 aatcaaaaat aaccgcttg
//
LOCUS       DANLTI010000186         3145 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.190, whole genome shotgun sequence.
ACCESSION   DANLTI010000186 DANLTI010000000
VERSION     DANLTI010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.190"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(115..1950)
                     /gene="glmS"
                     /locus_tag="PXB09_002558"
     CDS             complement(115..1950)
                     /gene="glmS"
                     /locus_tag="PXB09_002558"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDL5234612.1"
                     /translation="MCGIVGAVAQRDIAEILVDGLHRLEYRGYDSAGVAVLNADDKTM
                     QIVRRVGKVKALDEALDTKPLLGGTGIAHTRWATHGEPSETNAHPHRSGKIAVVHNGI
                     IENYEELKIVLQERGYVFQSQTDTEVIAHLVEWELRSASSLLEAVQKTVVQLRGAYGT
                     VVLNEEEPEHLIVARSGSPLVIGYGVGENFLASDPLALLSVTRRFAYLEEGDVAEITR
                     RTVDIYDREGNKAEREIHEGNFEADAADKGQYRHYMQKEIFEQPVAIMNTLDGRIKDG
                     KVDISAIAPNAAEILSKVEHVQIVACGTSYNAGMVSRYWFESIAGVSCDVEIASEFRY
                     RKFVTRPNSLLITLSQSGETADTLAALRLAKESGYMAAMTVCNVASSSLVRESDFAFL
                     TKAGVEIGVASTKAFTTQLTCLLLLNVAIGRLQGRMSEEQEHHIVQSLQRLPAQIESA
                     LVFDKQIEKLSEDFADKHHTLFLGRGEYYPVAMESALKLKEISYIHAEAYAAGELKHG
                     PLALIDSDMPVVVVAPENDLLEKVKSNIEEVRARGGQLYVFADHDAGFEEAEGFKTIV
                     MPKVDEVTAPIFYTVPLQLLSYHIALIKGTDVDQPRNLAKAVTVE"
     gene            complement(1998..2759)
                     /locus_tag="PXB09_002559"
     CDS             complement(1998..2759)
                     /locus_tag="PXB09_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDL5234613.1"
                     /translation="MSKRNTQQRRHLIVQMVQEKNEVSVDELAHFFETSEVTIRKDLT
                     ALEESGFLLRKYGGAVKIPSEMMEEAFIEQLSIQKKMIAQAARDCIRDHNRIIIDSGS
                     TTGALVKALNQTGLVVMTNSLNLATELTSLECEPTVLMTGGTWDSRSESFQGKVAEQV
                     LRSYDFDQLFIGADGLDLARGTTTFNELVGLSQVMAEVSREVIVLIESQKIGRKMPNI
                     ELKWQNITKIITDSQLSFETKEQIEKMGVEVVIAK"
     gene            complement(2916..3116)
                     /locus_tag="PXB09_002560"
     CDS             complement(2916..3116)
                     /locus_tag="PXB09_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5234614.1"
                     /translation="MKSILKVVGAMVLMVAVSGCNNMTKTQRNTAIGAAIGGVAGHAI
                     GESTGATLGGAALGGVIGSQIK"
BASE COUNT          886 a          744 c          546 g          969 t
ORIGIN      
        1 tttttaagct aatttaatag tttaagtaag cttatttata aattgtttca actatcaata
       61 aactgtccta taactcatat aaaaacccca agatatcttg gggtttaact aacattactc
      121 tacagtcacc gcttttgcaa ggttacgagg ttggtcaacg tccgttcctt tgattaaggc
      181 aatgtgatat gaaagtagtt gtaacggcac ggtgtagaaa atcggtgcgg ttacttcatc
      241 aactttcggc attacaatcg ttttgaagcc ttctgcttct tcaaaacctg catcgtgatc
      301 ggcaaacaca tataactgac cgcctcttgc acgcacttct tcaatattgg atttcacttt
      361 ctcaagcaag tcattttccg gtgctaccac cactaccggc atatcgctat caattaatgc
      421 taacgggccg tgttttaact cgcctgcggc ataagcttct gcgtgaatat atgaaatctc
      481 ttttaatttc aatgcagatt ccatcgcaac cgggtaatat tctccacgac ctaagaacaa
      541 tgtgtggtgt ttatccgcaa aatcttccga taatttttcg atttgtttat cgaacactaa
      601 cgcactttca atttgtgctg gtaagcgttg taaagattgc acgatatggt gttcttgctc
      661 ttcactcatt ctgccttgta agcgtccaat cgccacattt aataacaata agcaagttaa
      721 ttgagtagtg aatgctttgg ttgatgctac accaatttca acaccagctt tggttaagaa
      781 tgcaaaatcg gattcacgca ctaatgaaga acttgccaca ttacacaccg tcattgccgc
      841 catatagcca gattctttcg ctaaacgcag tgcagctaac gtatctgcgg tttcacctga
      901 ttgtgaaagc gtgattaata agctgttcgg gcgagtaacg aatttacggt aacggaattc
      961 ggaggcaatt tccacatcac agctcacgcc tgcaatggat tcaaaccaat aacgtgaaac
     1021 cataccagca ttgtaagagg ttccacaagc cacaatttgc acgtgttcta ctttcgataa
     1081 aatctctgcc gcattcggtg caatggctga aatatctact ttaccgtctt tgatacgacc
     1141 atctaaggta ttcataatcg caaccggctg ctcaaaaatc tctttttgca tatagtgacg
     1201 atattgtcct ttatctgccg cgtctgcctc aaaattgcct tcgtgaattt cacgctctgc
     1261 cttgttgcct tcacggtcat aaatatccac tgtgcgacgg gtaatttcgg ctacatcacc
     1321 ttcttctaga taagcaaaac ggcgagttac gcttaataat gcaagtgggt ctgaagcaag
     1381 gaagttctcg cctacaccgt aaccaatcac taacgggcta cctgagcgag ccacaattaa
     1441 atgctccggc tcttcttcat ttaataccac tgtgccgtaa gcaccacgca gttgcaccac
     1501 ggttttttgt accgcttcca ataatgaaga agcagaacgc aattcccatt caactaaatg
     1561 agcaatgact tcggtatcgg tttgagattg gaacacataa ccacgctctt gtaacactat
     1621 ttttaactct tcgtagtttt cgataatccc gttatgaact actgcaattt tgccactgcg
     1681 gtgtgggtga gcattagttt ctgacggctc gccgtgcgtt gcccagcgag tgtgtgcgat
     1741 cccagtgccg cctaatagtg gcttagtgtc taacgcctca tctaaggctt tgactttacc
     1801 gacacggcgt acaatttgca ttgttttatc atctgcattt aatactgcta caccagcaga
     1861 gtcatatcca cggtattcta agcgatgtaa accatcaacc aagatttctg cgatatcacg
     1921 ttgtgctact gcacctacaa ttccacacat aaatttgctt tcctatgttt aagtttaaaa
     1981 attcatttga gctactgcta ttttgcaata accacttcga cacccatttt ttcgatttgt
     2041 tctttcgttt caaaacttaa ttgactgtcg gtaataattt tggtaatatt ttgccatttc
     2101 aattcaatat tcggcatttt ccgaccgatt ttttgcgatt caattaacac aatcacttca
     2161 cggctcactt ctgccatcac ctgacttaag ccaactaatt cattaaaggt agtcgtgcct
     2221 cgagccaaat ctaaaccgtc cgcaccaata aaaagctgat cgaaatcata tgaacgcaat
     2281 acctgttctg ctactttgcc ttgaaaggac tcagaacggc tatcccaagt gccgccggtc
     2341 atcaacactg ttggttcgca ttcgagggaa gtcaattccg tcgctaaatt cagcgaattt
     2401 gtcatcacca ccaagccggt ttggttcaat gcttttacca aagctccggt cgtgctgccg
     2461 ctgtcaataa tgatgcgatt atgatcacga atacaatcac gtgcggcttg agcaatcatt
     2521 ttcttttgaa tcgaaagttg ctcaataaac gcttcttcca tcatttccga tggaattttt
     2581 accgccccac catacttacg caataaaaaa ccactttctt ccaaagcggt taaatctttt
     2641 ctaatcgtaa cttcagacgt ctcaaagaaa tgagcgagtt catctacact cacttcattt
     2701 ttctcttgta ccatttgaac aattaaatgg cggcgttgtt gcgtgttacg ttttgacatt
     2761 ataatcttca cttaaatttc gtttcaaaac ttttgcatta taaagaaagc tcgcgaaaag
     2821 aaaagcagaa aatgcaaaat ttacaaaatc tatacaaaat aaaaccgctt gtaatattga
     2881 tttacaagcg gttgatttct tgaaattttt tgcaattatt tgatttggct accaatcacg
     2941 ccaccaagtg cggcaccacc taaagttgca ccggtagatt caccaatcgc gtgaccagcc
     3001 acaccgccaa ttgctgcacc gattgcagta ttacgttgcg tttttgtcat attgttacag
     3061 ccagacacag caaccattaa taccattgca ccaacaactt tcaaaataga tttcataata
     3121 atccctcata attaatcaat ttcaa
//
LOCUS       DANLTI010000187         3132 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.191, whole genome shotgun sequence.
ACCESSION   DANLTI010000187 DANLTI010000000
VERSION     DANLTI010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3132
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.191"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            107..2146
                     /gene="malQ"
                     /locus_tag="PXB09_002561"
     CDS             107..2146
                     /gene="malQ"
                     /locus_tag="PXB09_002561"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5234615.1"
                     /translation="MSNKQNTAHYFYSPNIKEYASPSAFEKIERLLNTDNDLQKNNQI
                     LPLVKVITQPNAEQQAVEISLNFTNVAKWQIVLENGEVRNGEIKAEQSVLTLPADLPL
                     GYHQLSISTENDEESCSLIVTPPKAFQPKPLEERKKLWGAFLQLYTLRSDNNWGIGDF
                     GDLKQFLANISDYGADFVGLNPIHALFPADPDAASPYSPSFRLWQNIIYIDVSAVEAF
                     QQSEQAQQWFHTKETQQQLAELRAKDFVDYSQVAQLKLKALQFAFEHFSQSSQQQSQT
                     AFDAFIEQAGEPLKIQATFDALHHWISSEFGEKGGWTNWAEEYQSYYSPKVAEFQISQ
                     ATQIRFYMWLQFVANQQLAECNRFAQSLSMPIGFYRDLAVGVTQSGAETWADKALFVQ
                     EASIGAPPDMLAPNGQSWGLSPMHPHILQSRGYQPFIDLVRANMKHCGALRIDHILGF
                     ARMWWVANGESAKEGIYVRYPLEDLLSILALESQRHQCLVIAEALGIVPEGILDSLEQ
                     KGIFAYNVFYFEKAENAFKPLENYPYQAMTTLSTHDLPTIQGYWKGYDFELGEKFDTY
                     PSKAVLRKLKEERSYDRLNIRNAVEKVIALEPNEVGVTIKFTHQLQRYVAHTHSALFG
                     TQPEDWLNMLEPVNIPGTSTEYPNWRRKLSATTEQIFANKDIQQLLKDINEIRKG"
     gene            complement(2214..2945)
                     /locus_tag="PXB09_002562"
     CDS             complement(2214..2945)
                     /locus_tag="PXB09_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDL5234616.1"
                     /translation="MGCSSFSTKLKQEFFSGWTTFEASWLIVFLAIQIGIFIYQPDTW
                     IATIAAITGILCVVFVGKGKISNYLFGLISVSLYAYISYTFQLYGEMMLNLLVYVPVQ
                     FIGFYFWRKNMTSENTVNNAGVEEVIAKALTAKQWVIVAITTIIGTFLYIELLKYLGS
                     ALAILDGATVVISIVAQILMVLRYREQWALWIIVNIMTISLWTAMYFQNGETSLPLLV
                     MYVMYLCNSIYGYYNWIKLHRKHQQ"
BASE COUNT         1028 a          651 c          587 g          866 t
ORIGIN      
        1 ttttaacatc atatcacaaa gacaaacctg ttgcctactc ttcttactca tattaatctt
       61 cacaagatcg ttattttaac aaatacagta aaggaaaaaa gtcataatgt caaacaaaca
      121 aaatacagct cactattttt actccccaaa tattaaagag tatgccagcc cctctgcttt
      181 tgagaaaata gagcggcttt taaataccga taacgatttg caaaaaaata atcaaattct
      241 accgcttgtt aaagtgatta ctcagccaaa tgccgagcaa caagcggtcg aaatttcgct
      301 gaattttaca aatgtagcaa agtggcaaat tgtgcttgaa aatggtgagg ttcggaacgg
      361 tgaaattaag gcagagcaat cagttctaac cctgcctgcc gatttgcctt taggctatca
      421 tcagctttct atttcaactg aaaatgatga agaatcttgc tcgctgattg taacaccgcc
      481 gaaagctttc cagcctaagc cattggaaga aaggaaaaag ctctggggtg catttttaca
      541 gctttatact ttgcgttccg ataacaactg gggaattggc gattttggcg atctcaaaca
      601 attccttgcc aacatttctg attatggtgc agattttgtg ggcttaaacc ctattcacgc
      661 cctctttccg gcagatcctg atgcggcaag cccttacagc ccgtcctttc gactttggca
      721 aaatattatt tatattgatg tttcagcagt agaagccttt caacaatctg aacaggctca
      781 acaatggttt cacaccaaag aaactcaaca gcaacttgcc gaattgcgag ccaaagattt
      841 tgtcgattac agccaagtag cgcaactgaa attaaaggct ctgcagtttg cttttgagca
      901 tttttcacag tcatctcaac aacaatcgca aacagcgttc gatgccttta ttgagcaagc
      961 aggcgagcca ttaaaaatcc aagcaacgtt cgatgctttg caccactgga tttcatctga
     1021 atttggcgaa aaaggcggct ggacaaactg ggcggaggaa tatcaaagtt actattcgcc
     1081 taaagtagct gaatttcaaa tatcgcaggc aacgcagata cgtttttata tgtggttgca
     1141 atttgtggca aaccagcaat tagcagaatg caaccggttt gctcaatcac tttcaatgcc
     1201 gattggtttt taccgcgatt tagccgttgg tgttactcaa agcggagcgg aaacttgggc
     1261 ggataaagcc ctatttgtgc aagaggcgtc aatcggtgca ccacctgata tgcttgcccc
     1321 gaacggacag agctggggac tttcgccaat gcacccgcat attctacaaa gccgaggtta
     1381 tcagccgttt attgatttag tgcgtgctaa tatgaaacat tgtggggcat tgcgaatcga
     1441 ccatattctc ggcttcgccc gtatgtggtg ggtggcgaac ggtgaatcgg caaaagaagg
     1501 gatttatgtc cgttatccgc tcgaagattt gctctctatt ttggcattag aaagccaacg
     1561 tcaccaatgt ttagtgattg cagaggcact tggcattgtg cctgaaggca ttttggactc
     1621 tctcgagcaa aagggcattt ttgcctacaa tgttttttat tttgaaaagg cagaaaacgc
     1681 gtttaaaccg ctggaaaatt atccttacca agcgatgaca actctaagca cccacgattt
     1741 accgactatt caaggctatt ggaaaggcta tgattttgag ctaggcgaaa aatttgacac
     1801 ttacccaagc aaagccgtat tgagaaagct gaaagaagag cgttcgtacg accgcttgaa
     1861 tatccgtaat gcggtggaaa aagtgatagc actcgagcca aatgaagtgg gagtaacaat
     1921 aaaatttacc caccaattac aacgctatgt ggctcacact cacagtgcat tattcggtac
     1981 acagcccgaa gattggctca atatgttaga gccggtgaac attccgggaa ccagcaccga
     2041 ataccctaac tggagaagaa aattatccgc aaccaccgag cagatttttg caaataaaga
     2101 tattcaacaa ctgctaaaag atataaacga aattcgtaaa ggataataac aagcggtcat
     2161 ttttaggtaa atttttacaa aaaatgaccg cttgtaattt gtatttattc gctctattgc
     2221 tgatgttttc tgtgaagttt aatccagttg taataaccgt aaatagagtt acataaatac
     2281 atcacataca tcaccaacag cggcaagctg gtttcgccgt tttggaagta cattgccgtc
     2341 cataaagaaa tggtcataat attcacgata atccacaatg cccattgctc acggtagcga
     2401 agtaccatca aaatttgtgc cacaatcgaa ataaccactg ttgcaccatc taatatagct
     2461 aacgcactgc ctaaatattt aagcaattca atataaagaa atgtgccgat aatggtggta
     2521 atggcgacaa tcacccactg ttttgcggtt aaagctttag caattacctc ttccacacca
     2581 gcattattta ccgtgttttc gctggtcata tttttacgcc agaaatagaa accgataaac
     2641 tgcaccggca catatacaag taaattcagc atcatttcac catataactg aaaggtataa
     2701 gagatataag cataaagcga aacggaaatt aagccgaata gatagttact gatttttcct
     2761 ttaccgacaa ataccacgca taaaatacct gttattgccg caatagttgc aatccaagta
     2821 tcgggttgat aaataaaaat accgatttga atcgctaaaa aaacaatcaa ccaacttgcc
     2881 tcaaaagtag tccaaccact aaaaaactct tgttttaact tagttgaaaa agatgaacag
     2941 cccatatttc ctccatataa agtgaagtat tcttttcaaa ttctaagtta tttaaattaa
     3001 gaaatcaaaa tacagagtac cttttgataa atatacgaaa catttattat attaataaac
     3061 ctatatttaa ttggcattta actaaatcag tgttttttaa aactaaaaaa cataccaaaa
     3121 accaaataaa ac
//
LOCUS       DANLTI010000188         3130 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.192, whole genome shotgun sequence.
ACCESSION   DANLTI010000188 DANLTI010000000
VERSION     DANLTI010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.192"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..95)
                     /gene="rpmG"
                     /locus_tag="PXB09_002563"
     CDS             complement(<1..95)
                     /gene="rpmG"
                     /locus_tag="PXB09_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDL5234617.1"
                     /translation="MAAKGAREKIRLVSTAETGHFYTTDKNKRNMP"
     gene            complement(107..343)
                     /gene="rpmB"
                     /locus_tag="PXB09_002564"
     CDS             complement(107..343)
                     /gene="rpmB"
                     /locus_tag="PXB09_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDL5234618.1"
                     /translation="MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEN
                     RFVTLRLTAKGMRIIDKKGIDAVLAEIRARGEKI"
     gene            complement(575..1312)
                     /gene="radC"
                     /locus_tag="PXB09_002565"
     CDS             complement(575..1312)
                     /gene="radC"
                     /locus_tag="PXB09_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDL5234619.1"
                     /translation="MEEKMNDFFDEDSQEPTMMPREKLLTQGAASLTDSELLAIFLRT
                     GTKAVPVLALAESVLMAFGSLRQLLNANIDDFCKIYGLGKTKYIQLQASKEMTKRYLA
                     QQMEFSEMIQAPYMAIMYFQTELEEEEREVFMVLFLDNQNRLIYKEKMFFGTINQTAV
                     HPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDRSLTKKIEMACELVDIRFVDHIIV
                     GKGDYFSFEEEKLEMKEHSFLQISDRK"
     gene            1462..2664
                     /gene="coaBC"
                     /locus_tag="PXB09_002566"
     CDS             1462..2664
                     /gene="coaBC"
                     /locus_tag="PXB09_002566"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDL5234620.1"
                     /translation="MLQNKKILVGISGGIAAYKTIEFIRHLKKANAEVRVVLTPAAEA
                     FVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLIVIAPASADFIARLRMGMG
                     NDLLSTLCLATASPILLAPAMNQQMYKQIAVQENLSVLVNRGVQLIGPNSGFQACGDV
                     GAGRMSEPEEIYQAVLAHFSNNQDLEGLNVTITAGPTREAIDPVRYISNHSSGKMGYA
                     IANAFAERGAKVTLISGPVNLPTPKNVERINVESAVEMEQQAVKFAQKSAIFIGCAAV
                     ADYRMAAVSDQKIKKTDANDELTLKLVKNPDIIANVANLAENRPFVVGFAAETQNVAE
                     YAKSKLERKNLDMICANDVSGGQVFGQDQNALHLFWKNGEKTLPLADKSKLAESLVQE
                     IVKHYREK"
     gene            2664..2981
                     /locus_tag="PXB09_002567"
     CDS             2664..2981
                     /locus_tag="PXB09_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234621.1"
                     /translation="MKLLVSHFHQGEGKFPTFSAGTAVRLGSECVNYPNWFACEIDGW
                     KTFVPSHFISEDKLICDYNPTELVAAQGERVEFLELHYQWAIVKRENEIGWLPCEILR
                     VIG"
     gene            2978..>3130
                     /locus_tag="PXB09_002568"
     CDS             2978..>3130
                     /locus_tag="PXB09_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234622.1"
                     /translation="MKIMQLTSNQYINDIKHILLSARQKAYQAVNSAMVEAYWKIGER
                     IVQEEKN"
BASE COUNT          925 a          658 c          663 g          884 t
ORIGIN      
        1 ggcatattac gtttgttttt atctgttgtg tagaagtgac cagtttctgc tgtagaaact
       61 aaacggattt tctcacgagc gcctttagct gccatttttt agctccttag attttttcgc
      121 cacgagcacg gatttcagct aatactgcat caatgccttt tttatcaata atacgcatac
      181 ctttcgcagt taaacgtaag gttacgaaac ggttttcgct ctcaacccag aaacggtgag
      241 tgtgaaggtt tggtaagaaa cgacgtttag tcgcattcat tgcgtgtgag cggttgttac
      301 caactgctgg acgcttgccg gttacttggc aaactcttga catttgaatt tctccaataa
      361 ttttaagctt aaaaatggtt cgggcgatct cacaaaaggc gttgctcaac caacccctcc
      421 gattttgatt gcctcgtcag gcattaaccc gaccacagtc tatgtaataa agactgccga
      481 ttataccgat ttcatttgtt atattcaagt agaatttata tgcgtatctt ttactgtttc
      541 aggagaaatg ttaaaggtta cataaagcaa gcggtcattt tctatcagaa atttgcaaaa
      601 atgaatgctc cttcatctct aatttctctt cctcgaacga aaaatagtcc cctttgccga
      661 caataatatg atccacaaag cgaatatcaa ccaattcgca cgccatttcg atctttttag
      721 ttaaacttct gtccgactca ctcggcagac aagaacctga ggggtgatta tgagccacaa
      781 taatcgccgc ggcattatat tttaacgctc ttttaataat ttctcggggg tgaacagcag
      841 tttgattaat ggtgccgaag aacatttttt ctttataaat caatcggttt tggttgtcca
      901 aaaacagcac cataaaaact tcccgttctt cttcctccaa ctcggtttgg aaatacataa
      961 tcgccatata aggggcttga atcatctcgc taaattccat ttgttgagcc agatagcgtt
     1021 tggtcatctc tttagaggct tgtaactgaa tgtatttggt tttgcctaaa ccgtaaattt
     1081 tgcaaaaatc atcaatattt gcattcagta attggcgtaa cgagccaaat gccatcaaca
     1141 cactctctgc caatgccagc acaggcacag ctttcgtacc agtccgtaaa aatatcgcta
     1201 ataattcgga atcggttaat gaggctgccc cctgtgttaa taatttctca cgcggcatca
     1261 ttgttggctc ttgagaatct tcatcaaaaa aatcgttcat tttttcctcc atcaatttag
     1321 ttaagcataa aagagccaac ctttgcagac aaagggattt attcaatttt tcgagcaaga
     1381 tcgcaaaaat agtgaagttg tgagcaactc cttattccgc taaaatatgc aaaataaatc
     1441 cacgctttaa ggatagtaaa gatgttacaa aacaaaaaaa ttttagtcgg catttccggt
     1501 gggattgcag cctacaaaac cattgaattt atccgccact taaaaaaggc aaatgcggaa
     1561 gtgcgtgtag tgctaacccc agcagcagaa gcctttgtaa cgcctttgac cttacaagcg
     1621 atttccggca atgcggtttc cacttcacta ctcgacccac aagccgaact ggcgatgggg
     1681 catattgagc tggcaaaatg ggcggattta atcgttatcg ccccggcaag tgccgatttt
     1741 attgctcgcc tgcgtatggg aatgggcaac gatttacttt ccactctctg ccttgcgact
     1801 gcaagcccga ttttgcttgc accggcaatg aatcaacaaa tgtacaaaca gattgcggtg
     1861 caagaaaatc tgtctgtttt agtcaatcgt ggcgttcagc tcatcggccc gaatagtggc
     1921 ttccaagcct gtggtgatgt gggggctggc agaatgtctg agcctgaaga aatttaccaa
     1981 gcggtgttgg ctcatttctc caacaatcaa gatttagagg gcttaaatgt aaccattacc
     2041 gccggaccga ctcgtgaggc gattgaccct gtgcgttata tcagcaacca cagctccggc
     2101 aaaatgggct acgcgattgc taatgccttt gccgaacgtg gagcaaaggt tacgttgatt
     2161 agcggtccgg tgaatttacc aacgccgaaa aatgtggaac gaattaatgt ggaatctgcg
     2221 gttgagatgg agcaacaagc ggtcaaattt gcccaaaaat ctgcgatttt tattggctgt
     2281 gcagcggttg ccgattaccg aatggcggca gtctctgacc aaaaaattaa gaaaaccgat
     2341 gccaatgatg aactcacgct aaaattggta aaaaaccccg atattatcgc taacgtcgcc
     2401 aatcttgccg aaaaccgccc ttttgtggtt ggttttgccg cagaaacgca aaatgtggcg
     2461 gagtacgcta aatcgaaact cgaacgcaaa aatctggata tgatttgtgc caatgatgtc
     2521 tcaggcggac aagtgttcgg gcaggatcaa aatgcgttgc atttgttctg gaaaaatggt
     2581 gaaaaaacgc ttcctctggc ggataaaagc aaattggcag aaagtttggt acaggaaatt
     2641 gtaaaacatt atcgagaaaa ataatgaaat tactggttag ccattttcat caaggcgaag
     2701 ggaaatttcc tacattctca gctggtactg ccgttcgatt agggagtgaa tgtgtaaact
     2761 acccaaactg gtttgcctgt gaaattgacg gttggaaaac ctttgtgcca agccatttta
     2821 ttagcgaaga taaattgata tgcgattata acccaacgga acttgttgca gcacaaggcg
     2881 agagagtaga attccttgaa ctacattacc aatgggcaat tgtcaaaaga gaaaacgaaa
     2941 ttggctggct accttgtgaa atcttaaggg taataggatg aaaattatgc aacttacgtc
     3001 aaatcagtat atcaacgaca ttaaacatat tcttttatct gctcgccaaa aggcgtatca
     3061 agccgtgaat tcggcaatgg tcgaagccta ttggaaaatc ggtgaacgaa ttgtgcaaga
     3121 agagaaaaat
//
LOCUS       DANLTI010000189         3094 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.194, whole genome shotgun sequence.
ACCESSION   DANLTI010000189 DANLTI010000000
VERSION     DANLTI010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.194"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            274..1392
                     /locus_tag="PXB09_002569"
     CDS             274..1392
                     /locus_tag="PXB09_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5234623.1"
                     /translation="MKKTLVALAVTAFAASASATTVYDAEGSKVDFDGSLRIVLDRTN
                     SKELDNHNVVKTKKDAHTGIRNTGSRFGVRVKHDLAQDFYALGRVEFRFNKNTSDDGF
                     GDLYTKRAYVGLGSKQYGELTFGRQVTIADDLSQSVDYNYGINPKGDYIQTDGNQVIR
                     YNYRGVENLHVSANYNFAQDRKDGKVLANKLQNAYGIGALYTVDNWDLRAAYGHTNYK
                     TATDSTKHRKDGVLGSVGYKFGDLKLSVDTGYSREKGLAVTDDNGVTTFYNGVKSNAF
                     YVSPNFEYQVVPASKVYGNYLYERVKSKSNGSTYAAGKEKTHGFLLGVDYQFHKQVVA
                     FVEGSYTRTKDYDKVTNGYEYSGKSTNKAIGVGMRVYW"
     gene            complement(1545..2909)
                     /gene="glmU"
                     /locus_tag="PXB09_002570"
     CDS             complement(1545..2909)
                     /gene="glmU"
                     /locus_tag="PXB09_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDL5234624.1"
                     /translation="MTQLSVVILAAGKGTRMYSDLPKVLHPVAGKPMVKHVIDTAKQL
                     DAQQIHLIYGHGADLLKARLSEEPVNWVFQAEQLGTGHAMQQAAPFFADDENIVMLYG
                     DAPLITKATLERLIAAKPENGIALLTVELENPTGYGRIIRENGSVVAIVEQKDANEAQ
                     LKVKEVNTGVMVASGASFKKWLKNLNNNNAQGEYYITDVIAMANQEGFKVQAVQATEF
                     MEVEGANNRLQLAALERFYQKREAEKLLLAGVTIIDPSRFDLRGTVTHGKDVQIDVNV
                     ILEGEIKLGNNVKIGAGCVLKNCEIGDNVEIKPYSVIEDSIVGAKSAIGPFSRLRPGA
                     ELAEETHIGNFVEIKKATIGKGSKVNHLTYVGDAEIGKECNIGAGVITCNYDGANKFK
                     TIIGDNVFVGSDSQLIAPVTIASGSTIGAGATVTKDIAENELVISRVPQRHIQGWQRP
                     TKKK"
BASE COUNT          893 a          550 c          599 g         1052 t
ORIGIN      
        1 ttatcaatat gttatgcgct tcattttttc tgttaaaaat gagtggattt tctccaaatg
       61 aaataatgta agtataacca tttgatttta aaagaaaaaa tgccgtcttt gttttggggt
      121 ttgaactatt gacattgagt tttctttttg caattattct ggcgaaaaca atgttaggcg
      181 ttttgctgat acattgtatc ttggataatt actcttacac cttaatgagg gtaattactt
      241 atcatataac atataaaatc taaggtgaaa attatgaaaa aaacattagt tgcattagca
      301 gtaaccgcgt tcgcagcgtc agcatcagca accaccgttt acgatgcaga aggttcaaaa
      361 gtagattttg atggttcttt acgtattgtt cttgatagaa caaattctaa agagctagac
      421 aatcataatg ttgttaaaac taaaaaagat gcacacacag gaatccgtaa cactggttca
      481 cgttttggtg taagagtaaa acatgattta gctcaagatt tctatgcatt aggtcgtgtt
      541 gagttccgtt ttaacaaaaa taccagtgat gatggttttg gtgatttata tactaaacgt
      601 gcttatgttg gtttaggtag taagcaatat ggtgaattaa cttttggtcg tcaagtaacg
      661 attgctgatg atttaagtca atcagtagat tacaactacg gtattaatcc aaaaggtgat
      721 tatattcaaa ccgatggtaa ccaagttatt cgttataact accgtggtgt tgaaaactta
      781 catgtaagtg caaactataa ctttgcacaa gatcgtaaag atggtaaagt attagcaaat
      841 aaacttcaaa atgcatacgg cattggtgca ttatacactg tagataactg ggatttacgt
      901 gcagcttatg gtcatacaaa ctacaaaaca gctactgata gcactaagca ccgtaaagat
      961 ggtgtattag gttctgttgg ttataaattt ggtgacttaa aattaagtgt tgatacaggt
     1021 tattctcgtg agaagggttt agctgttacg gatgataatg gtgtaactac attctataat
     1081 ggtgttaaat caaacgcttt ctatgtatct ccaaactttg aatatcaagt agtgcctgca
     1141 tctaaagtat atggtaacta cttatatgag cgtgtgaaat ctaaatcaaa tggttctaca
     1201 tatgctgctg gtaaagaaaa aactcatggt ttcttacttg gtgttgatta ccaattccat
     1261 aaacaagtag ttgcttttgt tgagggttct tatactcgta ctaaagacta tgataaagta
     1321 actaatggtt atgaatactc aggcaaatca actaacaaag ctatcggtgt tggtatgcgt
     1381 gtatactggt aatcaattga ttttctaaat tgataaaccc ctaacaatat ttattgttag
     1441 gggttttgtt ttaaatatat tgttcattat cctttttaaa gtgtatggct ttgctgttat
     1501 tggcaaagcc aatttttaaa tataataact tttgaccact ggcactattt ctttttagtc
     1561 gggcgttgcc agccttgaat atggcgttgt ggtacacggc taattaccag ttcattttcc
     1621 gcaatgtctt tagtgactgt tgcaccggca ccaatggttg aaccgctggc aatcgtgacc
     1681 ggggcaatga gttggctgtc tgagccgaca aatacgttat cgccaataat ggttttgaat
     1741 ttattcgcac catcatagtt acaagtgatt acacctgctc cgatgttaca ttctttgccg
     1801 atttccgcat cgcctacata agtgagatga tttacttttg aacctttgcc gatggtagct
     1861 tttttgattt ccacaaagtt accgatatgg gtttcttccg ctaattctgc ccccgggcgt
     1921 aagcgagaga atggaccgat agcggatttt gccccgacaa tcgaatcttc aatcacagaa
     1981 taaggtttaa tttcaacatt atcgccaatt tcgcagtttt tcagtacgca gcctgcacca
     2041 atttttacat tgttaccgag tttgatttca ccttctagaa tgacattcac atcgatctga
     2101 acatcttttc cgtgggtgac agtgccacga agatcaaaac ggcttgggtc gataatagtt
     2161 acaccagcca ataacagttt ttccgcctca cgtttttggt agaaccgttc aagtgcagca
     2221 agttgcaaac ggttgtttgc cccttctact tccataaatt cagttgcctg aaccgcttgt
     2281 actttaaagc cttcttggtt tgccattgcg atcacatcag tgatgtaata ttcaccttga
     2341 gcattgttgt tatttaggtt tttcaaccat tttttgaagc tcgcaccgct tgctaccatc
     2401 acgccggtat tcacttcttt gactttaagc tgtgcttcat tggcatcttt ttgctcaaca
     2461 atcgctacca cagaaccatt ttcacgaata attcgtccgt agcctgtcgg gttttccaat
     2521 tcaacggtta gtaatgcaat accattttcc ggtttggctg cgattaaacg ctctaaagtg
     2581 gcttttgtga ttaggggggc atcaccataa agcattacaa tgttttcatc atcagcgaaa
     2641 aaaggagctg cttgttgcat tgcatgtcct gtgcctaatt gttcggcttg gaatacccag
     2701 tttacaggct cttcgcttaa acgtgctttt aacagatcgg caccgtgtcc gtaaattaaa
     2761 tgaatttgct gggcatctag ctgtttggca gtatcaataa cgtgttttac catgggttta
     2821 ccggcaactg ggtgtaacac tttgggtaaa tctgaataca tacgagtgcc tttaccggca
     2881 gctaaaataa caacgctcag ttgagtcata tagaatcctt atttgactaa atagatgaag
     2941 gcttatagta acgtgtaaat tgctataagt gatatttttg taatatttta acctttttat
     3001 aagtggattt catcgacaag caaaagaaat ttgtctgttt gttatctttt tctattatgt
     3061 cgattcttat cttgtggaaa actggtataa atag
//
LOCUS       DANLTI010000190         2889 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.195, whole genome shotgun sequence.
ACCESSION   DANLTI010000190 DANLTI010000000
VERSION     DANLTI010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.195"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            44..637
                     /locus_tag="PXB09_002571"
     CDS             44..637
                     /locus_tag="PXB09_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234625.1"
                     /translation="MKLKALSTLIASSMLYSQSFAVPPEKTAEEPQPFFNKTESGYDL
                     VFNDQNYRLIETELNGEKIQFRAFERIVYVNNPIEPDYQTINLYVPEAYYNNGEINGY
                     QADTAPIFLPNSVGGYMPAKAASYDKKRRDGSPGTILVALSKGYVVASVGARGRTLQK
                     EGKYTGKAPSAIIDSKSAAHKACRFESDHWHHSLCKI"
     gene            993..1304
                     /locus_tag="PXB09_002572"
     CDS             993..1304
                     /locus_tag="PXB09_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5234626.1"
                     /translation="MVIIMLSKTKSPTLFPKYQNALLQLGENIRLASKRRMFTQTLLA
                     QRTGLSRVTVRKIMNGDPTVAIGYYLMVLGVLGLEQDFTDVGKDDELGRKLQDIELLR
                     K"
     gene            1304..2545
                     /locus_tag="PXB09_002573"
     CDS             1304..2545
                     /locus_tag="PXB09_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HDL5234627.1"
                     /translation="MMNKRIYVFADWETFSQPELVGVLSSDVVRGKENFRFSYDNEWL
                     SSPYVQQIDPNLYLYPGEQYSTDTQNFHIFLDSCPDRWGRLLMKRREAALASQENRKP
                     KLLIESDYLLGVHDMNRMGALRFKTELNGPFLDNNTRLAAPPLSSLRELEFAAIQLES
                     SDNVDDPDYLKWLHMLISPGSSLGGARPKASVIDELNQLWIAKFPSRYDDYDIALWEY
                     LAYRLAIQAKIEMATCRIERFNQEHHTFLTQRFDRHCGKRRHFTSALTQLGYYDGDYE
                     ASYLEIAQFLTESGSNTRIDLAQLWRRIVFNIAISNTDDHLRNHGFIYAQEGWILSPA
                     YDLNPVPLSQGLHLNITDSDNRLDYQLAFDVADFFQLSKQQAVQIYDEVLKEINNWQN
                     VAKEIGIPRQEQEQMKFAFNV"
BASE COUNT          947 a          530 c          562 g          850 t
ORIGIN      
        1 cgaccgcttg ttgtaccgat tcatatttca taaaggacaa aaaatgaagc taaaagcctt
       61 atctacactc attgcctctt caatgctata tagtcagagt tttgctgtac cgccggaaaa
      121 aacagctgaa gagccacagc cctttttcaa taaaaccgaa tctgggtatg atttagtctt
      181 taatgatcaa aactatcgtt taattgaaac ggaattaaat ggcgagaaaa tccaattccg
      241 tgcctttgag cggattgtgt atgtgaacaa tccgattgag ccagattacc aaacaattaa
      301 tctgtatgtg ccggaagctt actacaataa tggcgaaatc aatggctacc aagcggatac
      361 cgccccgatc ttcttgccaa attcagtggg gggctatatg ccggcaaaag cggcaagtta
      421 tgataaaaaa agacgtgacg gttcaccagg tacgattttg gtggcgttat ctaaaggcta
      481 tgtggtggca agtgtgggag caagaggacg cacgctacaa aaagagggaa aatacaccgg
      541 caaagcacct tctgccatta ttgattcaaa atccgccgcc cataaagcgt gtcggttcga
      601 gtccgaccac tggcaccact cactatgtaa aatttagttt tacatagttt gctgtaagca
      661 tttgaatttt gaatcgtttg tgtaggattg ttcaaatcat attcgcaaat acacagttac
      721 tacgatgtat ccagccaata catccattgg gattttccgt ccgaatttca gacgttctag
      781 atcttacaca ttctttcaag tttgtaaagc ctgaaaatca ttttttagat tgattttatt
      841 tgaaaaaatc tattttttct tttaattcaa atttagtcaa aacttcacca gatatttttt
      901 tccgaaaaac cctctctacc tattttactg tttacataac tgctcttgca attgctataa
      961 atggacatta taatttccaa aaaaacataa aaatggtaat aataatgctc agtaaaacaa
     1021 aatcaccaac tctgtttcct aagtaccaaa atgccttgct tcaacttgga gaaaatatta
     1081 ggctagcctc aaaaaggaga atgtttactc aaacattatt ggctcaaaga actgggctta
     1141 gccgtgtaac agtgagaaaa attatgaatg gtgatccaac tgttgcgatt ggatactacc
     1201 taatggtttt aggtgttctc ggtctagaac aagatttcac tgatgttgga aaggatgatg
     1261 agttaggacg taaattgcaa gatattgaat tattaaggaa ataatgatga ataaacgaat
     1321 ttatgtgttt gcagattggg aaactttttc acagcctgaa ttagttgggg tgctttcttc
     1381 tgatgtagtg agaggcaaag aaaatttccg ttttagctac gataacgagt ggttaagttc
     1441 accctatgta cagcagattg atcctaactt atacctttac cctggagagc aatacagtac
     1501 agatacacaa aattttcata tctttttaga ttcttgccct gatagatggg gtagattgtt
     1561 aatgaaacgt cgggaggcag ctctagctag tcaagagaat cgtaaaccta agttactaat
     1621 agaaagtgat taccttttag gcgtacacga tatgaataga atgggggctt tacgttttaa
     1681 aactgaattg aatggtccat ttttggacaa taatactcgt cttgcagcac caccactgtc
     1741 ttccttaaga gaattagaat ttgcagcaat acaacttgaa agcagtgata atgtggacga
     1801 tccggattat ttaaaatggc ttcatatgtt gatatcacca gggtcgtcac taggcggagc
     1861 tagaccaaaa gcttcggtaa tagatgaact aaatcaacta tggattgcca aatttccaag
     1921 tcggtacgat gattatgata ttgctctttg ggaatattta gcttatcgac tggctattca
     1981 agccaaaatt gaaatggcta cttgtagaat tgaacgcttt aaccaagaac accatacttt
     2041 tttgacacaa agatttgatc gacattgtgg aaaacgtcgc cattttacgt cagcattaac
     2101 ccagctgggt tattatgacg gagactatga ggcaagctac cttgagattg ctcaattttt
     2161 aacagaaagt ggttcaaata ctcgaattga cttggctcaa ctatggagaa gaattgtatt
     2221 caatattgct atttcgaata ctgatgatca tttgcgtaac cacggattta tctacgctca
     2281 agaggggtgg atattatctc ccgcatacga tttaaaccca gtaccactat ctcaaggatt
     2341 acatttaaac ataacagaca gcgataaccg attggattat cagctcgcct ttgatgttgc
     2401 tgactttttt caattatcta agcaacaagc cgtacagatt tatgatgaag tactgaaaga
     2461 aattaataat tggcaaaatg tcgcaaaaga aattggtatt ccacgccaag agcaagagca
     2521 gatgaaattt gcatttaatg tatagtaatt gacttgtgga accaatcatc gtagtctatg
     2581 ttctaaaaaa gtagcgttac cttaataacg caatgagttg ttggctcatt gtcaatctga
     2641 tattaatcta ggatgtaaag gcctagcggt ggcaggcacc agaaagacct gatactaatc
     2701 tagggtataa agacctagcg gtggcagaca ccagaacaaa ccaacatctt ataaaaccat
     2761 tagtaacact tgactttttt ctcaaccata tccgcaagga agcgtagcct taaaaacgca
     2821 aatgtaggaa actaatctag gcatatataa tgcctagcag atggcagaca tcagaaaaac
     2881 taacattta
//
LOCUS       DANLTI010000191         2870 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.196, whole genome shotgun sequence.
ACCESSION   DANLTI010000191 DANLTI010000000
VERSION     DANLTI010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.196"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..804
                     /locus_tag="PXB09_002574"
     CDS             <1..804
                     /locus_tag="PXB09_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5234628.1"
                     /translation="ALAADLGYQTQVETLIKSLCYHHSHLKIYLFQKTFPNEWFDIWC
                     QKLALLSSEIIPVKVCVDFSKYKSLEHINETGFYRYLIPYLDEERVLYLDSDIVVDDN
                     LSEMYWLNFNGIPLYAVEDYVHNHIPAYLDLDLSPYFNSGVLLINNILWKKYSVCDEL
                     VTINEKIVNLTYGDQDALNIYFKGGWGALPIEYNYQVDAILELVLRREQEELARKNGY
                     LDVIPKIIHYTSKFKPWKKELHTMQISTRKKYWFYYHLEWNDILEQHQK"
     gene            complement(850..1137)
                     /locus_tag="PXB09_002575"
     CDS             complement(850..1137)
                     /locus_tag="PXB09_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5234629.1"
                     /translation="MKNDKPIECEGCNTFDVGSILDNSETVATIQRTYESENEAKAAL
                     EKFTQKARDVESEPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF"
     gene            1257..1670
                     /locus_tag="PXB09_002576"
     CDS             1257..1670
                     /locus_tag="PXB09_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PACE efflux transporter"
                     /protein_id="HDL5234630.1"
                     /translation="MTAWERVFHALLFECFAIIFTVILTSWLTSHRMVDLTAVIVMIS
                     VIAMVWNVIFNWGFDKVFTGERVQRGLGIRILHSFLFEGGLLVFTIPLVMYMLDIGWW
                     QAFVMDIGMTLFVLVYSVVFNWVYDHLRLRWVKSG"
     gene            1755..2747
                     /gene="mglB"
                     /locus_tag="PXB09_002577"
     CDS             1755..2747
                     /gene="mglB"
                     /locus_tag="PXB09_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5234631.1"
                     /translation="MKRTILSAFALSVICGVNLSYAQSESRVGVTIYKYDDHFMTQMR
                     KDMQNEAKGFAGLKWFMNDAQNSQVKQLAQIETLLQHKMRVLAVNIVNANESKTIVEK
                     AKAYNVPVVFFNRTPSKQALESYEKAYFVSADPKEAGRIQGELIAKVWKSNPDFDLNK
                     DGKLQFVLLKGEPSDVSAERSQAVVESLNQQGVQAEEIYSDTARWRRTLARNKMNEWL
                     VENRAAEIEVVISNNDEMAIGALDALNAHEKRLPIFGIDALPETLALMKKGEIAGTVL
                     NDSSAQAKAVVKLVSNLAQGKPALKDTQWESHSSKTIYLPHIGIDKENLGQFLP"
BASE COUNT          861 a          443 c          634 g          932 t
ORIGIN      
        1 gcattagcag ctgatttagg ctatcaaact caagttgaaa ccttaattaa atcgctttgt
       61 tatcatcatt ctcatcttaa gatttatcta tttcagaaaa cttttcctaa tgaatggttt
      121 gatatctggt gccaaaaatt agccttatta tcgagtgaaa ttattcctgt gaaagtctgt
      181 gtagattttt caaaatataa gagtttagag catattaatg aaacgggttt ttatcgttac
      241 cttattccat atctggacga agaacgtgta ctatatttag attcagatat tgtggttgat
      301 gataatttat cagaaatgta ctggcttaat tttaatggta tacctttata tgcagtagag
      361 gattatgttc ataatcatat accggcttat cttgatttag acctcagccc ttattttaat
      421 tctggggtac tattaattaa taatatactt tggaagaagt attcagtatg tgatgagttg
      481 gttactatca atgaaaaaat tgtaaactta acttatggcg atcaagatgc tctcaatatt
      541 tactttaaag gcggttgggg agcattgccg atagagtata attatcaagt tgatgcaatt
      601 cttgaactag tattaagaag agaacaagag gaacttgcga gaaaaaatgg ctatttagat
      661 gtgattccga aaattatcca ctatacgagt aaattcaaac cttggaaaaa agaactgcat
      721 acaatgcaaa tatctacgcg taaaaaatat tggttttact atcatttaga gtggaacgat
      781 attttggaac aacatcaaaa atagctatca tacaaaagct gattcaagtg tttgaatcag
      841 ctttttgtat tagaaacgtg ttcctaattg aaaaataacc acttctgctt ggcagctaaa
      901 tttgaagtga gcaaccagtt caaaaccgct ttcaatcggg gtgatttcac tgctgatttc
      961 acagggttca gattcgacat cacgggcttt ttgagtgaat ttttcaagtg ccgctttagc
     1021 ttcattttcg ctttcataag tgcgctgaat agtagcgact gtttcgctgt tatctaaaat
     1081 agaacctaca tcaaatgtgt tacagccttc gcattcaatc ggtttatcgt ttttcattgg
     1141 ctaatccttc taaattgatg aataatgtag gtactttaaa actaaattgc gtaacctgca
     1201 atcatcagtg aacgattatt tgatttagtt ggtattttgc aaagtttgga ggaaaaatga
     1261 ccgcttggga gcgtgtgttt cacgcgctgt tatttgaatg tttcgctatt atttttacgg
     1321 ttatcttaac ttcttggctg acttctcatc gtatggttga tttaaccgca gtgattgtga
     1381 tgatttcggt gattgcaatg gtgtggaatg ttatttttaa ctggggtttt gataaggtgt
     1441 ttaccggtga gcgagtgcaa cgtggtttag gcattcgtat tttgcattca ttcctttttg
     1501 agggcggttt gctggttttt actatcccat tggtaatgta tatgctcgat atcggctggt
     1561 ggcaggcgtt tgtgatggat attggaatga ccttatttgt attagtttat tcggtagttt
     1621 ttaattgggt gtacgatcat ttacgcctga ggtgggttaa atctggctaa attgtgaact
     1681 agatcacggt ttccttacac aaaattcgct atgcttgaat tggttcatat ttggcatagc
     1741 aagagggaca ttctatgaag cgtacaatct tgagtgcttt tgcactttct gttatttgcg
     1801 gtgtgaatct aagttacgca caatctgaaa gcagagtggg ggtaacgatt tacaaatatg
     1861 atgaccattt tatgactcaa atgcgtaagg atatgcaaaa cgaggcgaaa ggcttcgctg
     1921 ggttgaagtg gtttatgaat gatgcacaaa attcccaagt gaagcaatta gcgcaaattg
     1981 aaaccttact tcagcataaa atgcgtgtgt tggcggtgaa tattgtgaat gcaaatgagt
     2041 cgaaaactat tgtggaaaaa gcgaaggctt ataatgtgcc ggttgtcttt tttaaccgca
     2101 caccgagtaa acaagcgtta gaaagttacg aaaaggcgta ctttgtgagc gctgatccta
     2161 aagaggccgg tagaatccaa ggggaattaa ttgcgaaagt gtggaaatca aaccccgatt
     2221 tcgatctaaa taaagacggg aaattgcaat ttgtattgct taagggcgag ccgagtgatg
     2281 tgagcgctga gcgttctcaa gctgtggttg aatcgcttaa tcaacaaggt gttcaggcag
     2341 aagaaattta cagtgacacg gcgagatggc gtagaacatt ggctcgcaat aaaatgaatg
     2401 agtggctggt ggaaaaccgt gcagctgaga ttgaagttgt gatttcaaac aatgatgaaa
     2461 tggcaattgg tgctttagat gcgttaaatg cacacgagaa aagattgccg atctttggta
     2521 ttgatgcctt gcctgagacg ttagcattaa tgaaaaaagg ggaaatagcc ggcacggtat
     2581 taaatgatag ctctgcacaa gcgaaagcgg tggtgaaatt ggtatctaat ttggcacaag
     2641 gtaagcctgc gctgaaagat acgcagtggg aaagccattc ctctaaaacg atttatcttc
     2701 cacatattgg tattgataag gaaaatttag ggcaattttt accttaaatg gaggagcggg
     2761 gcgttataaa tacgcccctt attgatgata acaagcggtc atttttcagt aaaatcttgc
     2821 aaatcctttc tcttttcttc caacagattt gaatagagcg aatattcaaa
//
LOCUS       DANLTI010000192         2844 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.197, whole genome shotgun sequence.
ACCESSION   DANLTI010000192 DANLTI010000000
VERSION     DANLTI010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.197"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            275..568
                     /locus_tag="PXB09_002578"
     CDS             275..568
                     /locus_tag="PXB09_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HDL5234632.1"
                     /translation="MFKVIFMALSAIVNYLISDFLIKGVIFLSVYFLTSELLPVVIEM
                     LVSRKLIPDLNALFGQLPESMWYFLNIFQIPMAISLMISAMISRFVRRMPFIG"
     gene            578..1117
                     /locus_tag="PXB09_002579"
     CDS             578..1117
                     /locus_tag="PXB09_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234633.1"
                     /translation="MAVSAYIGIPGSGKSYEVVKSVILPAVASNRRVVSNIYGLNKEK
                     IHQYLLRKNKKLMIEELGEVIYVTNEQCLESDFLPSMDEQDSFCKAGDLIIIDEVWRI
                     WGNDKDIPKNHRSFIAEHRHFADPITGVTCDLVVINQDISQIPRFIKEGLRQLTECKN
                     TLVWGCVIVIGLMFFKERI"
     gene            1048..1611
                     /locus_tag="PXB09_002580"
     CDS             1048..1611
                     /locus_tag="PXB09_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234634.1"
                     /translation="MQKHVGLGLRNRYRVDVFQGKNLAKKNRTNSYQEKYDKKIFELY
                     KSYESDGAREAVTDSRQSIFSSFWVKVWIILLPLALFYCGYNLYIFLNGSESEVSHNT
                     EQAKFASDENHNDIVIHLLPTIGKPLSTKWRITGELKRDNKSFVILADNENRLRLEPS
                     SQFSFSGRMLQGEIDGGIVSYFSGESK"
     gene            1608..2741
                     /locus_tag="PXB09_002581"
     CDS             1608..2741
                     /locus_tag="PXB09_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HDL5234635.1"
                     /translation="MKIHQLGLLLMISSFSYAKNVDFKLEAVPLPKAISIIYDEVLQK
                     PYMLDPKLSNDSRVISFHTTEQQNFEQFIQRYFSNMNISVSEKKGVVYIGHIEPKQPK
                     VIKRSFVYSPIHRDVDYLASFLKDGTEGNQVFASGDKLVYYGTSEDIARVKSILKSID
                     TKSREVVVTGYVFEVQNIEKEGSGINLLAKLLSGKLGISVGYKQSYENFITVNAGNLD
                     AMFELFRTDQRFRVVSSPTLRVKSGSRGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSS
                     GVIFDIQPTIKDKAIDLKIQQLSNFIKTDTGVNNSPTLVKRDLVTDVTVKSGDVIVLG
                     GLAENKISNGETSFSLLPKGWLSGKSNENTKTDIIVLLQVKEI"
BASE COUNT          960 a          383 c          565 g          936 t
ORIGIN      
        1 ctgatattaa tttgcctgat ctggaagttc ctacggcgga atcaattata tcccctttta
       61 aaaaattgct accagattta cagaattttg aactgaataa acgaaccgca caatgccctg
      121 tttggacatt taatattgaa tacttgagat ttcattatga acttagagaa cattgcgatt
      181 tgatagaacc acataaagaa atcttaaagc tattattcgg cattatttgg gcgtttattg
      241 ctttacgtta tgtattaagt gcttaggagg ataaatgttt aaagtgattt ttatggcact
      301 atcagcaatt gtgaattatt tgatttcaga ttttttaatt aagggtgtca tatttttatc
      361 tgtctatttt ttaacttctg aactacttcc tgtagtaata gagatgcttg tgtctagaaa
      421 attgatacct gatttaaatg cgttatttgg gcaattgcct gaaagtatgt ggtatttttt
      481 aaatattttt cagataccaa tggctatttc tttaatgatt tcagcaatga tttcacgttt
      541 tgttagacgt atgccattta ttggatagag gagtgctatg gctgtttcag cgtatatagg
      601 gattcctgga agcggcaaat cgtatgaagt ggttaagtca gtaattttac ctgctgttgc
      661 ttcgaatcga agagttgttt ccaacattta tggattaaat aaagagaaaa ttcatcaata
      721 tttactgcgt aaaaataaaa aattaatgat tgaagagctt ggtgaagtca tatatgtaac
      781 gaatgaacaa tgcttggaat cggatttttt accatcaatg gacgaacaag attcattttg
      841 caaagctggg gacttgataa ttattgatga agtttggcgt atttggggaa acgacaagga
      901 tattccaaaa aatcatcgtt catttattgc tgaacatcga cattttgcag atcctataac
      961 aggtgtaact tgtgatttag tcgtaataaa tcaagatatt tctcaaattc caagatttat
     1021 taaagaagga ttgagacaac ttaccgaatg caaaaacacg ttggtttggg gttgcgtaat
     1081 cgttatcggg ttgatgtttt tcaaggaaag aatttagcta aaaagaaccg gacaaattct
     1141 tatcaagaaa aatatgataa aaaaatattt gagctttata aatcttatga atctgatggt
     1201 gcaagagaag cggttacaga tagtaggcaa tctatatttt catctttttg ggtcaaggta
     1261 tggattattc ttttaccatt ggcattattt tattgtggct ataaccttta cattttccta
     1321 aatggttcag agagtgaagt aagccataat actgaacagg ctaaatttgc ttctgatgaa
     1381 aaccataacg atatagtaat tcatttactt cctactattg gaaaaccttt atcaactaaa
     1441 tggcgaataa caggggaact aaaaagggat aataaatcat ttgtgatctt agctgacaat
     1501 gaaaaccgtt taagacttga gcctagtagc cagtttagtt ttagcggtcg aatgttgcaa
     1561 ggagagatag atggtggaat agttagttat ttttcgggag aatctaaatg aaaatccatc
     1621 aattagggct attgctcatg attagctcat tttcttatgc taagaatgtt gattttaaat
     1681 tagaagctgt gccgttaccg aaagcaatat caataatata cgatgaagtg ctacaaaagc
     1741 catatatgct tgatcctaaa ttatctaatg attcaagggt tattagcttt catacaacag
     1801 agcaacagaa ttttgagcag tttattcaac ggtatttcag caatatgaat atcagtgtat
     1861 cagagaaaaa aggtgttgtt tatattggac atattgaacc aaaacagccg aaagtaataa
     1921 aacgtagttt tgtgtattcg cctattcatc gtgatgttga ttatttggct agcttcctga
     1981 aagatggaac agaaggaaac caagtttttg caagtggcga caagcttgta tattatggta
     2041 cttctgaaga tattgcacga gtgaaaagta tcttgaaatc aatcgacaca aaaagccgtg
     2101 aagtagtggt aactggttat gtttttgaag tgcagaatat tgaaaaagag ggtagtggca
     2161 taaacttgtt agcgaaattg ctatcaggaa aattaggcat tagtgttggt tacaagcaaa
     2221 gttatgaaaa ctttatcacc gtgaatgcag gaaatttaga tgcaatgttt gaattgtttc
     2281 gcacagatca gcgttttagg gttgtcagca gtccgacatt aagagtaaaa tcaggctcaa
     2341 gaggtaattt ttcagtaggc tctgatgtcc ctgtattatc gaatgtaacc tatcaggacg
     2401 gaaggcctat tcagtcgatt gaataccgtt caagcggtgt aatatttgat attcagccaa
     2461 cgataaaaga taaagcgatt gatttaaaaa ttcaacaact atcaaatttc atcaaaacag
     2521 ataccggtgt aaataatagc ccaacgttgg taaagcgtga tctggtaaca gatgttacgg
     2581 ttaaaagcgg tgatgttatc gttttaggtg ggttagctga aaataaaata tctaatggcg
     2641 aaaccagttt ttcattgcta cctaaaggtt ggttaagtgg aaaatcaaat gaaaatacta
     2701 aaacagatat tatagttctg ctacaagtaa aggaaattta atatgtatga ggaaaattta
     2761 gattataaat tgtcattaaa tgaatttaag tcgcttttgt cagatttaga caaacaaata
     2821 gatgagaaat atagagaatc tttt
//
LOCUS       DANLTI010000193         2838 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.198, whole genome shotgun sequence.
ACCESSION   DANLTI010000193 DANLTI010000000
VERSION     DANLTI010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.198"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..1160)
                     /gene="lpxB"
                     /locus_tag="PXB09_002582"
     CDS             complement(<1..1160)
                     /gene="lpxB"
                     /locus_tag="PXB09_002582"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDL5234636.1"
                     /translation="MKQQFPVIGLVAGEVSGDILGAGLIKALKVHYPNARFIGVAGSR
                     MIEAGCQSLFDMEELSVMGLAEVVKHLPRLLKRRKQVIDEMLKLKPDVFIGIDAPDFN
                     LTVEEKLKASGIKTIHYVSPSVWAWRQKRVFKIARAANLVLAFLPFEKAFYDKFNVPC
                     RFIGHTMADAIPLEPNRTEACLALNIDESKRYMAILVGSRGSEIQFLAEPFLKAAQLL
                     KARFPDLQFLVPMVSQKRMEQFNAIKQQVAPELELNIIQGKARQAMIASECTLLASGT
                     AALEAMLCKSPMVVGYRMKPLTYWLAKKLVKTDYISLPNLLAQAPLVPELIQEACNPE
                     NLAQELSLFLADDEKNQQHKALLKQQFMQLHQSIQCNADEQAAQAVIDLLNGS"
     gene            1294..2388
                     /locus_tag="PXB09_002583"
     CDS             1294..2388
                     /locus_tag="PXB09_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5234637.1"
                     /translation="MKKTTLAILASALIANSALAITIYDHKETGTQIEFIGSARIKWE
                     STSDKTSPVNGKATRNHVNHAVDNNGSRFGFRLTQQVGHGFYALGRVEWRMRGDSSSQ
                     HNFDHIYDHQLYAGIGHKQYGELTYGNMTNIADEVKQTDLPNTLSLSDGLLTGSSRRT
                     LQYVYKGIEGLKLGAFYGGNSQRGNNGLDLVNKRKDIWGAAAIYNYKIDDNQSLKLAT
                     GATRERSEQSIGNYERIALAFGTAYTYGKTTLGLDLERRETEDQNAIGHKRIEKEVRT
                     VLLHRLTDQWNAYTMYAYKENKLNAVGLANDSKVKRNQFMLGTEYYIVPKHLKGFVEW
                     QATRAKHYTNDVKTAKSRNYTTVVGLRAYW"
BASE COUNT          923 a          597 c          508 g          810 t
ORIGIN      
        1 gagccgttta ggagatcgat aaccgcttgg gcagcttgct catcagcatt acattgaatt
       61 gattgatgta gctgcataaa ctgctgtttt agcaatgctt tatgttgttg gtttttctca
      121 tcatcagcta aaaatagaga taactcttga gctaaatttt ccgggttgca tgcttcttgg
      181 atcaattctg gtaccaatgg ggcttgagcc aataaattcg gtaaggagat ataatcggtt
      241 ttcactaatt tttttgctaa ccaataagtc agcggtttca ttctataacc aactaccatc
      301 ggagatttgc acaacattgc ctctagtgct gctgttcccg atgccaaaag agtacattct
      361 gacgcaatca tagcctgacg agccttgcct tgaataatat tcagttccaa ctcgggagct
      421 acttgctgtt taattgcatt aaattgctcc attcgctttt ggctgaccat tggcactaaa
      481 aactgtaaat ccggaaaacg ggcttttaac aactgagcag ccttcaaaaa aggctcagcc
      541 aaaaactgaa tttcactgcc acggcttccc accaaaattg ccatatatcg cttggattca
      601 tcaatattta acgctaaaca tgcctctgta cgatttggtt cgagtgggat cgcatctgcc
      661 atcgtatgcc cgataaaacg acaaggcaca ttgaatttat catagaacgc tttctcaaat
      721 ggcagaaatg ccaacactaa attagctgct ctggcaattt taaacacccg cttttgtcgc
      781 caagcccaca ccgaagggct aacataatgg attgttttaa tcccactcgc tttgagtttt
      841 tcttcaacgg ttaaattaaa atccggtgca tcaataccga taaatacatc tggtttcaat
      901 ttaagcatct catcaataac ctgtttacga cgcttaagta aacgaggtaa atgtttaacc
      961 acctctgcta gccccattac agaaagctct tccatatcaa acaaagactg gcagccagcc
     1021 tcaatcattc gagagcctgc aacaccgata aatcgagcat tcgggtaatg tacttttaac
     1081 gccttaatta acccggcacc aagaatatcg ccagagacct caccagcaac taagccaata
     1141 acggggaatt gttgtttcat attaaatatt attgaagatc tgtaagtgac tctattataa
     1201 ccaatcatca tataaactaa caaaacatta ttgtctagca atgaatattc acatacacta
     1261 cctcccttta tctattcata tggagtgatt tttatgaaaa aaacaacatt agcgatttta
     1321 gcatcagcct taatcgcaaa ctcagctcta gctattacga tttacgatca taaagaaacc
     1381 ggtacacaaa ttgaatttat tggttctgct cgtattaagt gggaaagcac ctcagataaa
     1441 acctcaccgg taaatggtaa agctacccgc aaccacgtta atcacgcagt ggataacaac
     1501 ggctctcgtt ttggtttccg tttaacccag caagtgggtc acggattcta tgctttaggt
     1561 cgtgtggaat ggcgtatgcg tggcgattca agctcacaac ataacttcga tcatatttat
     1621 gatcatcaac tctatgcagg aatcgggcat aaacaatacg gtgaattaac atacggcaat
     1681 atgactaata ttgccgatga agtaaaacaa actgacttac caaatacact cagcttaagt
     1741 gatggcttac ttaccggttc atcacgacgt acgcttcaat atgtttacaa aggcatcgaa
     1801 ggattaaaac tcggagcatt ctatggcgga aatagccaac gtggaaacaa tggcttagat
     1861 ttagtcaata aacgtaaaga tatttggggt gcagcagcaa tttataacta taaaattgat
     1921 gataaccaaa gcttaaaatt agcaacaggt gcaacccgtg agcgttctga gcaatctatc
     1981 ggcaattatg aacgcattgc tcttgccttc ggtacagctt atacctacgg aaaaactacc
     2041 cttggcttag atttagaacg ccgtgaaacg gaagatcaaa atgctatcgg tcacaaacgt
     2101 atcgaaaaag aagttcgcac tgtgttactc catcgtttaa ccgatcaatg gaatgcttac
     2161 acaatgtatg cttataaaga aaacaaactt aatgctgtag gcttggcaaa tgatagcaaa
     2221 gttaaaagaa accaatttat gttgggaacg gaatattaca ttgttccaaa acacttaaaa
     2281 ggctttgttg aatggcaagc aactcgtgct aaacactata ctaatgatgt aaaaaccgca
     2341 aaatctcgca attatacgac tgttgtaggc ttacgagcat attggtaata aaactgaaaa
     2401 gcgtactaga atgatctgca cctaaaagtt gggctaacca actgattaag gtgcagattt
     2461 tttatgatta aatacaacta atccttcaaa caagaagcta ttgcatttat cttcaaagtg
     2521 gtaaaaaccg cttactcacc tattagcatc ttcagcttta agaaacaaca ctaaaatttt
     2581 agtgtgaact aatataatca taatggcaat aactgagcag ccaaaacgcc taaatttaaa
     2641 ttatctgttg caaaagaggt taaactgcaa aaagtgatga ggggttatta tatgtagaag
     2701 atcaaaccta atctgacagt cccccgtttt aaattaccgt gtctgtcaga ttaatttgag
     2761 cttaaattct tttccaccca aatccgtttt ccatcaagta aggttgccat cggtgttctg
     2821 ccacagcaca tttttcct
//
LOCUS       DANLTI010000194         2817 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.199, whole genome shotgun sequence.
ACCESSION   DANLTI010000194 DANLTI010000000
VERSION     DANLTI010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.199"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1743
                     /locus_tag="PXB09_002584"
     CDS             <1..1743
                     /locus_tag="PXB09_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005687591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
                     /protein_id="HDL5234638.1"
                     /translation="TIVIHPQDKLEAHLEKISSRAVGENFESKYLKEDCQTVQSYLKE
                     GHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVKENAEIAPLNSYLRWLPM
                     NFNPQMDAKSHYYTKYYFVQHLANLLPIFGRDTGTGNPGITYFNRGGAPFNFDPFNRK
                     DRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRPRTFVVEAGNSFGLLADYAERFGL
                     TVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDNDDTDDEGDMQRDLLAEM
                     ELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSEGRQTLTEDIKNALEALS
                     HDEHTREERRTRLAEMAESLEMFCTGVNGQFFNREGAIWPEADLTLVDLAMFAREGYE
                     AELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITANPLLAKFLVKGSKMWRKL
                     GIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEINRFRKLSEAQKTMLLSA
                     KKSDRKYTEGVVLATNMEALFRVVPPSLFLALGMTEKHEKAERKQLMMQHGYTELDAA
                     LEVAARIDKARGIH"
     gene            1743..2171
                     /locus_tag="PXB09_002585"
     CDS             1743..2171
                     /locus_tag="PXB09_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234639.1"
                     /translation="MNKQHYRLFNAGPQKSSLGVVSPAVETQLLGFCEQIRQLIGVGK
                     QITLFPHRVVQNHWAIELSGEQGSVHLLLNVTGRSLLPTSNNSEWSARLIIEIADHVD
                     AYWFSAFLTQYLGLKSNLLPLSTSIADNSVYNEVIDNNEV"
     gene            2161..2478
                     /locus_tag="PXB09_002586"
     CDS             2161..2478
                     /locus_tag="PXB09_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5234640.1"
                     /translation="MKSDTTKPKMTRVITVLKITLMIIGIILLLLVVGWLAMTYFPST
                     NFQAWFYETRYAWLGWRFVLYVAIWLLMVQLNRKGQMPLKARLMILSVIPIIEGLNLL
                     YLL"
     gene            2489..>2817
                     /locus_tag="PXB09_002587"
     CDS             2489..>2817
                     /locus_tag="PXB09_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5234641.1"
                     /translation="MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFVLPLIFVLIS
                     TWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVLVLAPMIPINLNNIELNVERSKA
                     CGYRVPTA"
BASE COUNT          850 a          530 c          617 g          820 t
ORIGIN      
        1 accatcgtca tccatccaca ggataagttg gaggcacatt tagaaaaaat tagtagtcga
       61 gcggtaggtg aaaattttga gtcgaaatac ctaaaagaag actgtcaaac tgtacagtct
      121 tatcttaaag aggggcataa actctatcaa gcagctattg cattttacgt tcgaggtaag
      181 gatgaaaagg agctacgtac ccgttctcgc cagttgagaa cgattctgct cagtaacaac
      241 ctagaacccg tgaaggaaaa tgcagaaatt gccccactta acagctattt gcgttggcta
      301 ccaatgaatt ttaatccgca gatggatgcc aaatcacatt actacacgaa gtactatttt
      361 gtacaacatt tggcaaactt attacctatc tttggccgag ataccgggac tgggaatccg
      421 gggatcactt actttaatcg aggaggagca ccatttaatt tcgacccatt taaccgtaaa
      481 gacagaacca aaaatgctca caagctatta ttaggtccaa ccggttcggg aaaatcagct
      541 acgttatgtg ggcaattatg tcaggctatg gccgtttatc gcccacggac ttttgttgtt
      601 gaggcaggaa attcatttgg tttattagcg gactatgcag aacgtttcgg actgactgta
      661 aatcgcatta cgttagctcc aaacagcggc attgtcttac cactcttttc agaagcacat
      721 cgtctattgg atatggaatt aaacccggaa gatgtgccgg aagacattga ggataacgat
      781 gacactgatg atgaaggtga tatgcaacga gatttattgg ccgaaatgga gctgacggca
      841 cgtttgatga tcaccggagg tgaaaagaaa gaagatgaaa aaatgagccg tgctgatcgt
      901 gctgctattc gtcgtgccat tttaaatgca gctcgccaaa ccaaatctga aggcagacaa
      961 acgctgactg aagatattaa aaatgctttg gaagcattaa gtcatgatga gcatactcgt
     1021 gaagaacggc gtacccgttt agcagaaatg gcagaatcat tagaaatgtt ttgtaccggt
     1081 gtaaatgggc aattttttaa tcgagagggg gcaatttggc cggaggctga tctaacctta
     1141 gttgatttag ctatgtttgc ccgggaaggc tatgaagcag agttggccat ttcctatatt
     1201 tcactcatta accatatcaa cagtcttggt gaaaaatacc aacacagtga tcggatgatt
     1261 ctgaatgtaa cagatgaatc acacattatc acggccaacc cattattagc taaattccta
     1321 gttaaaggct caaaaatgtg gcgtaaacta gggatttggc tatggcttgc tactcaaaat
     1381 atggatgact tcccgaatga agcggcgaaa ttactctcaa tggtcgaatg gtgggaattg
     1441 ttgaatgtgt ctgccagtga aattgatgaa atcaatcgtt tccggaaact gtcagaggcc
     1501 cagaaaacga tgttgttatc tgccaaaaaa tcagatcgta aatataccga gggcgtggta
     1561 ttagcaacga atatggaagc tctattccga gttgtaccgc ctagcttatt tttagcttta
     1621 ggaatgactg aaaaacatga aaaagcagaa cgtaagcaac tgatgatgca gcacggctat
     1681 accgaactcg atgcagcttt agaggttgca gctcggattg ataaagcaag aggaatacac
     1741 taatgaataa acaacattac cgtttattta atgcaggccc acaaaaatcc tcattaggag
     1801 ttgtatctcc agcggtagaa actcaattgc ttggattttg tgaacaaatt cgccaactca
     1861 tcggcgttgg gaaacagatt accttattcc ctcatcgtgt cgtgcaaaat cactgggcta
     1921 tcgaactttc tggtgagcag ggttctgttc acttattact taatgtgacg gggcgttctt
     1981 tgctaccaac ttccaataac agtgaatggt cagctcgttt aattattgaa atagctgatc
     2041 atgtggatgc ttattggttt tcggcattcc ttactcagta tctcggtttg aaaagtaatc
     2101 ttttaccctt atccacatca attgcggata actctgtgta taacgaggta atagataata
     2161 atgaagtctg atacaacaaa gcctaaaatg acaagggtta ttactgtatt aaaaataacc
     2221 ttgatgatca tcggtattat tttattacta ctcgttgttg gctggttggc aatgacctat
     2281 tttccttcca caaattttca agcgtggttc tatgaaaccc gctatgcctg gttgggatgg
     2341 cgatttgttt tatatgtagc tatttggcta ttgatggtac aacttaatcg aaaagggcaa
     2401 atgccattaa aagccaggtt aatgatttta tctgtcatcc caattattga gggacttaat
     2461 ttactgtatc tactttaagg aggatgagat gacctttacc gtagatagtt acttagaata
     2521 ctttcttacc ttactggctt ggatcatcaa caacaatatt ttcgctgtat tggttcaaac
     2581 agggttgttt gttctgcctc tcatttttgt cttaatcagt acgtggatgg aagtcaaaaa
     2641 acaaggtgag gacgaaggta ataaagggga tttacttatt acttggctca gcctcaaatt
     2701 ttacccggcg atgtttgtcg ttgtattggt cttagctcca atgataccga tcaacctgaa
     2761 taatattgag ttgaatgtag aacgttctaa agcctgtggt tatcgtgttc caactgc
//
LOCUS       DANLTI010000195         2778 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.200, whole genome shotgun sequence.
ACCESSION   DANLTI010000195 DANLTI010000000
VERSION     DANLTI010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.200"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..705)
                     /locus_tag="PXB09_002588"
     CDS             complement(<1..705)
                     /locus_tag="PXB09_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5234642.1"
                     /translation="MWKNRQLFFGYAENRLLLLSRSITGLLGILCGVYIIDHLVLSDV
                     DMIGKLTSFILIILSAIFLKERASLLQWILCLIAFIGALFIIKPAVDIRFMPYLVGVI
                     GSVFAAIAYLCLRLLAKTKKVESPNTIVFFFSAFSTLILLPFVAIDYVVLTNLQTIYL
                     VLAGVTSAVGQFCVTTAYKYAAAKDISIYSYASVLFSAILGLLFFEQYPDMLSWLGYA
                     IIFVSSWLMFVLTKKQS"
     gene            complement(941..1426)
                     /locus_tag="PXB09_002589"
     CDS             complement(941..1426)
                     /locus_tag="PXB09_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5234643.1"
                     /translation="MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAANAA
                     GEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER
                     GTPEYNIALGQRRADAVKGYLAAKGANNTSTVSYGEEKPAVLGHSEADYAKNRRAVLE
                     Y"
     gene            complement(1453..2739)
                     /gene="tolB"
                     /locus_tag="PXB09_002590"
     CDS             complement(1453..2739)
                     /gene="tolB"
                     /locus_tag="PXB09_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDL5234644.1"
                     /translation="MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAV
                     VPFKASGVPADVAQIISDDLRNSGKFTPLERSQMPAQPGSAAEVVADQWSAIGIDNIV
                     VGQVSSTGGGYNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKL
                     TQIRGAFRTKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAY
                     VTFENKKAQVVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVG
                     SGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMGGSGS
                     YNAKVSSDGKNLIMIAGDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG
                     TSKVLQLVSADGRFKANLPGAGGHYKFPAWSPYLTK"
BASE COUNT          882 a          625 c          505 g          766 t
ORIGIN      
        1 tgattgcttt ttagttaata caaacataag ccagcttgag acaaaaataa ttgcataacc
       61 tagccaactc aacatatccg ggtattgttc aaagaacaac aaccctaaaa ttgcactaaa
      121 tagcacagag gcataactat aaattgagat gtctttcgcc gccgcatatt tataggcggt
      181 agttacacaa aactgcccga ccgctgaagt tacccctgct aacactaagt agattgtctg
      241 taaattggtt agcactacat aatcaatggc gacaaaaggc aataatatca aggtcgaaaa
      301 ggcagaaaaa aagaaaacaa tggtattagg tgattctact tttttggttt ttgccaataa
      361 ccttaagcat aaataggcaa tggctgcaaa cacagagcca atcacgccaa ccagataagg
      421 cataaagcga atatcaactg ccggtttgat aataaaaagt gccccgataa aggcaataag
      481 gcataaaatc cattgcagga gagatgctct ctcttttaaa aaaatcgcag aaagaataat
      541 taaaatgaac gacgtgagtt tgccaatcat atcgacatca cttagcacaa ggtgatcgat
      601 gatatataca ccacataaaa tccccaataa cccggtgatg gaacggctta ataataacaa
      661 acgattttct gcataaccaa agaataattg gcgatttttc cacacaatat aaccgcttat
      721 caatgctgtg cgttgcgaaa aatcgctttt tgtgcaatcg gtacatcccc cgaaagacga
      781 agaaaagcag ccataatcgc aaagcttagt gccgacaaaa gcacacaaaa aatggcttta
      841 aataacggcg agagcgaatt ccaaaaattc atagcataaa ggcttttaat aaaaataaag
      901 ccctgattat tcagggcttc aatttagaat caactaagaa ttagtattct aatactgcac
      961 gacggttttt cgcgtagtca gcttctgagt gacctaatac tgctggtttc tcttcaccgt
     1021 aagaaacagt tgaagtgttg ttagcacctt tagctgctaa gtaaccttta actgcatctg
     1081 cgcgacgttg acctaatgcg atgttgtact ctggagtacc acgctcatca gcgtgaccag
     1141 caatagttac gttaccttga gtttttgcta ataattgagc gtgagcgtct aataattgac
     1201 ggtattcacc ttcaactgca tagctgtcaa aaccgaagta tacagtgttg tattgtgctt
     1261 ttaattgttc agctgttaaa ccaccgaatt cgcctgctgc atttgctgct gcatttgctg
     1321 ctgcgtttgc tgctgcgttt gctgctgcat catctgatga gctgctacat gctgctaatg
     1381 cgaaagctgg tactgctacc attaatactt tagcaaattt tttcatttgt tgctcctaat
     1441 agagaaatat tattatttag ttaagtatgg tgaccatgca gggaatttat aatgtccacc
     1501 tgcgccaggc aaattagctt taaaacgccc atctgcagac accaattgta gcactttact
     1561 cgtacctttg gtagagctat aaataaccat aatgccattc ggtgaaatac ttggactttc
     1621 gtctaagaaa gttgaactca gtacttctgt gccacctgaa gcgagatcgc gtttcacaac
     1681 tctatcaccg gcaatcatga ttaaattctt accatcagat gatactttcg cattatagct
     1741 accgctaccg cccattgggc tagcaccacc acctgatgaa ctcattctat aaacttgagg
     1801 agaacctgca cggtcagacg taaagtagat tgtgctacca tctggagacc agcttggttc
     1861 agtattattt ccagcattag cggtcaattt acttggtgta ccaccgccac tacctacaac
     1921 ataaatattt aactcaccat cttgatttga ggcaaacgca atgcgagaac cgtctggaga
     1981 gaatgatggc gcaccattat gtcctttcaa tgctgccact acacggcgag cacctgaacg
     2041 aatatcgtga acaacaacct gcgctttttt attttcaaat gtcacataag ctaatctgct
     2101 accatctggt gaccactctg gcgacattaa aggctcttta ctggttgtaa tagtaaaggc
     2161 attaaaacca tcataatcag atactcgtaa ttcatacgat gatacgccac gttgaaccac
     2221 atacgcaatt ttagttctaa atgcaccgcg aatttgggtt aatttttcaa atacctcatc
     2281 acttactgta tgcgcacctt gacgaatttg ggctgccgga acaataaatg aaccttgggc
     2341 aatgacacca cccgctgtac ccgatgtacc aagagtatca attaattgat aagcgacatt
     2401 ataaccgcca cctgtgctac tcacttggcc aactacaata ttatcaatac cgatagcact
     2461 ccattgatct gccaccactt ccgctgctga tcccggttga gcaggcattt gagagcgttc
     2521 aagcggtgta aatttaccac tatttcgcaa atcatcagaa ataatttgtg caacatctgc
     2581 cggcacaccg ctggctttaa atggcacaac cgcaatcggc tgagccatac ttacaccttc
     2641 atcaatagaa attcgcacat cagaatcagc aaccacctga gttgtcaata atgctgaaaa
     2701 gatgcctatt acacccgata tacgagagaa taatttcatt tgtagtcctc taaattattt
     2761 aacttttaaa ctaaaatc
//
LOCUS       DANLTI010000196         2714 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.201, whole genome shotgun sequence.
ACCESSION   DANLTI010000196 DANLTI010000000
VERSION     DANLTI010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.201"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(131..1726)
                     /locus_tag="PXB09_002591"
     CDS             complement(131..1726)
                     /locus_tag="PXB09_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5234645.1"
                     /translation="MRLSQLSLSVLLLSASSLVAAAPVNTLINCVATPPMKLSPAITN
                     DANDFNASSQQIYNRLLAFKAGELTVEPSLAERWEISDDGLSYTFHLRKDVKFHSNKQ
                     FTPTRTLNADDVVFSFQRQMDLNHPYHKVSDGTYFYYHWMNLPKILKTVEKVDDYTVK
                     ITLQQPNAPFLTTLAMDFLSIYSKEYADKLLAEGKPELLDQAPIGTGPFVFQAYQTDQ
                     AVRYVANPDYFQGKAKFEKLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKQDP
                     KVNLLQRDGLNLAYIGLNSTKPALNNAKVRQALHYATDKKAIVEAVYQGGGTVASNPF
                     PDSVLGYNPNLPQYEFNLEKAKALLTEAGFADGFETEIWVQPVVRPSNPNPRRTAEII
                     QADWAKIGVKAKLVTHEWADFNKRTREGEFSTGTYGWTSRNGDPDNFLFPLLSKSNIP
                     GTNYGRWTDEKFEQLLAQAVQTQNRDERAKLYQQAVEIANEQTPFIPLAHAINYVPLS
                     KRVQGFVQNPFGYTPFYGVSLSE"
     gene            1875..2315
                     /gene="mioC"
                     /locus_tag="PXB09_002592"
     CDS             1875..2315
                     /gene="mioC"
                     /locus_tag="PXB09_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDL5234646.1"
                     /translation="MTSICIITGSTLGGAEYVADHINEVLSEQGFEVELFNQATLADI
                     EGKTNLIIVTSTHGAGELPENIQQLFDDLANSSADFSSMKFGVIGLGSSDYDTFCNAV
                     NIVEEALKAKGASQVCESLRIDVMNNFDHDGSAEEWLPSFVEQL"
     gene            2327..2494
                     /locus_tag="PXB09_002593"
     CDS             2327..2494
                     /locus_tag="PXB09_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HDL5234647.1"
                     /translation="MNKISANKAKWIKIAIILIYMFSPVDILPEAILGPFGLVDDAAA
                     LMLLIKTILEK"
     gene            complement(2583..>2714)
                     /locus_tag="PXB09_002594"
     CDS             complement(2583..>2714)
                     /locus_tag="PXB09_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248981.1"
                     /note="transcriptional repressor of asnA which codes for
                     aspartate-ammonia ligase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDL5234648.1"
                     /translation="KVMTHTIEELHSVLAGKIQSIDEIQSTETLISLQNPISRDILP"
BASE COUNT          803 a          564 c          550 g          797 t
ORIGIN      
        1 tacggctatg caaaatgatt tgcaaaacta tgcaaaataa atcgaccgct tacaattcta
       61 aaagaaaagc agtctattct ctaccacatt ttgcaaaaaa gtggcaaaaa tagaccgctt
      121 gtatggcata tcactccgat aaactcaccc cataaaatgg cgtgtagcca aacggatttt
      181 gcacaaaacc ttgcacccgt ttgctgagtg gtacataatt gatagcgtga gccagcggaa
      241 taaatggcgt ttgttcgttg gcaatttcca ccgcttgttg atagagcttc gcccgctcgt
      301 cacggttttg ggtttgtaca gcttgagcta ataactgctc aaatttctca tccgtccaac
      361 gcccataatt tgttcccgga atattagatt tgcttaataa agggaagagg aaattatcag
      421 gatcaccatt acggcttgtc caaccataag tgccggtaga gaactcgcct tcacgggtgc
      481 gtttgttaaa atccgcccat tcgtgggtca ctaatttcgc tttcaccccg attttcgccc
      541 aatccgcctg aataatttca gccgttcgac gtgggtttgg gttagaaggg cgcactaccg
      601 gttgtaccca aatttccgtt tcaaatccat cggcaaagcc ggcttctgtt aatagggctt
      661 tggctttttc aaggttaaat tcatattgcg gtaaatttgg attatagccc aacaccgaat
      721 cagggaacgg attacttgcc accgtgccac cgccttgata aacagcctcg acaatcgctt
      781 tcttatcggt tgcataatgc aaggcttggc gaactttggc gttatttaat gccggtttgg
      841 tgctgtttaa gccgatataa gctaaattca gcccgtctct ctgtaacaaa ttcaccttcg
      901 gatcttgttt catttgggca atatcggaaa tattcgggaa atcaatcaca tcgcattcac
      961 ccgctttcag tttggcataa cgagtgcccg catcaggggt aatactaaaa atcagtttct
     1021 caaattttgc tttaccttgg aaataatccg ggttcgcaac ataacgcacc gcttgatcgg
     1081 tttgataggc ttggaacaca aaaggccctg tgccgatcgg ggcttgatcc aataactccg
     1141 gcttgccttc cgccagcaat ttatccgcat attcttttga ataaatcgac aagaaatcca
     1201 tcgctaaggt tgtcagaaaa ggagcattag gttgctgtaa ggtgatttta acagtgtaat
     1261 cgtccacttt ttccactgtt tttaaaatct tcggcaaatt catccaatgg taatagaaat
     1321 aagtaccgtc agagacctta tggtaagggt ggtttaaatc catctggcgt tggaacgaga
     1381 acactacatc atccgcattc agcgttcgag ttggcgtaaa ttgtttattg gaatgaaatt
     1441 tcacgtcttt acgtaaatgg aatgtgtaac ttaagccatc gtcactgatt tcccaacgtt
     1501 ccgccaaact cggctcaacc gttagttcac cggctttaaa cgctaataag cgattataaa
     1561 tttgttgtga actggcgttg aaatcattgg catcattagt aattgcagga ctaagtttca
     1621 tcggtggagt tgccacgcaa ttaatcaacg tatttaccgg agctgctgcc accaaactgc
     1681 tggcacttaa gagtaaaaca gaaagagata attgagaaag acgcataaag actccttaac
     1741 attttctact aacttactcg gcattaacgt attttcaaaa taactaaagg ttataattta
     1801 taatcagaat aatcagttgc aaaccaatga ttcttggcta gaatattggc agttttttaa
     1861 acgagagatt tactatgaca tcaatttgta tcatcaccgg cagcacctta ggcggtgcgg
     1921 aatatgttgc cgatcacatt aatgaggtat taagcgaaca aggttttgaa gtggaactgt
     1981 ttaaccaagc cacccttgcc gatattgagg gcaaaaccaa tctgattatc gttacctcta
     2041 cccacggagc cggcgagtta cccgaaaata tccaacagct atttgacgat ttagcaaata
     2101 gctcggctga tttcagcagt atgaaatttg gtgtaatcgg tttaggtagc tccgactatg
     2161 acaccttctg caatgcagta aatattgttg aagaagctct caaagcgaaa ggggcaagcc
     2221 aagtttgcga atcactgaga attgatgtaa tgaataattt cgaccacgat ggcagtgctg
     2281 aagaatggtt accatcattt gttgaacaat tataacttaa gtatcaatga acaaaatcag
     2341 tgcaaataag gcaaagtgga ttaaaatcgc tattatctta atctatatgt tcagccctgt
     2401 agatattcta cccgaagcga ttttaggccc attcggtttg gttgatgatg ccgccgcatt
     2461 aatgctattg attaagacta ttttggaaaa ataggcatag tagacaaaat agttgcaaaa
     2521 aaccaaaaca aaacgaccgc ttgtaaccca atacaagtgg tcttatcttt tacttaattc
     2581 ttttaaggga gaatatctct tgaaatagga ttttgaagtg aaataagcgt ttctgttgac
     2641 tgaatttcat caatagactg aatttttcct gctaataccg aatgcaactc ttcgatggta
     2701 tgggtcatta cttt
//
LOCUS       DANLTI010000197         2703 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.202, whole genome shotgun sequence.
ACCESSION   DANLTI010000197 DANLTI010000000
VERSION     DANLTI010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.202"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..245)
                     /locus_tag="PXB09_002595"
     CDS             complement(<1..245)
                     /locus_tag="PXB09_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234649.1"
                     /translation="MTKTKHKHPLAEAFYQLGKDVGEINRRLVVVDEQSLKLQELKQT
                     INEQTEQIKTLGTVVNKLIDALQQSQSLNVRSESAVAA"
     gene            complement(238..387)
                     /locus_tag="PXB09_002596"
     CDS             complement(238..387)
                     /locus_tag="PXB09_002596"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234650.1"
                     /translation="MDNILITIHPTETIDITIDKLVVIHIGEEYGDTPDFLTIYQQAK
                     ELNDD"
     gene            complement(621..914)
                     /locus_tag="PXB09_002597"
     CDS             complement(621..914)
                     /locus_tag="PXB09_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234651.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGEESDSEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYNHLKETGQIVV"
     gene            complement(1037..>2703)
                     /locus_tag="PXB09_002598"
     CDS             complement(1037..>2703)
                     /locus_tag="PXB09_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HDL5234652.1"
                     /translation="THTIKTETIAGGRKAIAGIAFGATADNRNAESSVIVMADKFEVV
                     KNAQDGTPVRLFGVVENKVAINGNLIATGSISGDHINANSVRTAVLTAGAIKTEHLAA
                     GQISADKLAIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRTIFNRNEQ
                     DNYGLKNGGLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRG
                     QAKLVIENIEKPGGAYLGRIGNSEVITGYSAHQGEFKNMKRVKVVFTAPTSGCIRFAL
                     RLDNIQGKANPFLFARRPMLEEASDNVTDITQPSPWQNAGVTAIHGGSIVTNTVTAQQ
                     IAANTITANEIATGTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGKVTA
                     GTITGTTITGNTISGGSINGTTISGTTISGGTIKGARLEGATGKFTGELEVSQLIGGG
                     VIEQVTGKLKYSHRNRIYEGQEHGENSSSPIYRHEYIYKATVTINAAPTRRYIEIIGS
                     ESFILEANQSITKTIEKSLNRNASGSSLDFIVLAYSISTAKYISIS"
BASE COUNT          702 a          583 c          511 g          907 t
ORIGIN      
        1 gctgctacag cagattctga tcttacattt aaactttgtg actgttgtaa tgcatcaata
       61 agtttattta ccactgttcc gagtgtttta atttgctcgg tttgctcatt aatagtctgc
      121 tttaactctt gcagttttaa tgattgctca tccacaacca ctaatcgacg gttaatctct
      181 cctacgtctt tacctaattg ataaaatgct tctgcaagtg ggtgtttgtg tttagtttta
      241 gtcatcgtta agctcctttg cttgttggta tatagttaaa aagtcaggtg tgtcaccata
      301 ctcctcacct atatggataa ctaccagttt gtctatggtg atatcaatag tttcggttgg
      361 atgtatagtg attaagatat tgtccatatt cccgccttaa atttgggttt ggtcagggat
      421 aagttggatc gtgccgtagt actgccattt tgggtggata gctcaatttg aggctctgtg
      481 ctgccctcta ctatggcgtg taaatccagc ctaataccct ctaaatttac aggctcgcca
      541 tttgtttgcc taaaaaaaaa ggcgataact tacgtcatcg cctctgaaaa acttaaattt
      601 atgcttttgc atttagaccc ctacactaca atctgaccgg tttctttgag gtggttgtag
      661 atacgtccta acataatctg cgttggcgtt ttgccaatat cctcttttgt tagcggtgca
      721 tcagtaatcg ctttggctga ttgagcatca atatatttgt actcacttgt gatgattaca
      781 aagtttgtta cctcgctatc gctctcctca cctgtgccaa cgacatattt agcattgagt
      841 gagccgtcgt cttgagttga gtagcttgcg atggtggaat acattgggtt taagattttg
      901 ttaaaagttg tcataatttt tccttttatc gatagttgaa ataaaaacaa tcgcctgaat
      961 tgacctgcaa gcggttggtt ttggatattt aaaaaagctg tggctatccg cactcagtac
     1021 tacattgagg cgataactaa ctgatagaga tatatttagc cgtcgaaatg gaataggcta
     1081 aaacaataaa atctaaagag ctaccacttg catttctatt taatgatttc tctattgttt
     1141 ttgtgattga ttgatttgct tctaaaatga atgactcact tccgatgatt tcaatatacc
     1201 tccttgtcgg cgctgcattt atggtgacag ttgctttata gatatattcg tgtctataaa
     1261 ttggagagga ggagttttct ccatgttctt gcccctcata aatgcgatta cgatgtgaat
     1321 attttaattt gcctgtaacc tgctctataa cacctccccc tattaattga gatacttcaa
     1381 gttcgccggt aaatttgcca gtagccccct ccaatcttgc accctttatt gtgccgccag
     1441 agatagttgt accgctaatt gttgtaccat taatacttcc gccactaatt gtattaccag
     1501 taattgtcgt acctgtaatt gtaccagcag ttaccttacc aagatttgcc gatattgccg
     1561 ctaaattgtt tacatttagc ttatccgcag tgatcgaact ccccacaata tgacttgcat
     1621 taatcgagtt tgctgccata tttcgagctg caatcgtgcc ggttgcgatt tcgttggcgg
     1681 taatggtatt tgctgcaatt tgttgagcag taacggtatt agtaactatt gatccaccgt
     1741 ggatagcggt tacaccggca ttttgccaag ggctaggctg agtgatatct gtaacattat
     1801 cactagcctc ctcaagcatt ggcctacgag caaataaaaa tggattagct ttaccttgaa
     1861 tattatctaa tcgtaatgcg aaacgaatac agcctgaagt aggtgcagta aatacaacct
     1921 taacccgttt catattttta aattcgcctt gatgagcact atagccagta attacctcgc
     1981 tgttgcctat ccgacctaaa taagcaccac caggtttttc gatattctca atgactaatt
     2041 tagcttgccc acgatgacaa gctaaccata cggaggcaat atatttttta ttaggcacaa
     2101 cattaatatc ctgagataac cacccaattc gcccagtatc agaggtttcc tttgtagtgc
     2161 tataccgcat cgaaaatact aactcatttg gtagtcctcc attttttagt ccgtaattat
     2221 cttgttcatt cctattgaaa atagtacggg tgtcaatatt tagccgatca ccaacttctc
     2281 ctcgccagta gttccagcca aacggagcta ttgacaaatc gggtgttgca aaaataggat
     2341 taaccagcaa attcccacct agcccaatcg ctaacttatc cgccgatatt tgccctgctg
     2401 ccaaatgctc cgttttaatc gctcctgcag tcaatacagc agttctgacg gaatttgcat
     2461 tgatgtggtc tcctgaaatc gagcctgttg cgattaaatt cccattaatc gctactttat
     2521 tttctaccac gccaaatagt cttactggcg tgccgtcttg ggcgtttttc acgacctcaa
     2581 atttatctgc catcacaatc acagaagatt ccgcattacg gttatctgcc gttgcaccaa
     2641 atgcaatacc ggcaatcgct ttgcgtccac cggcaatggt ttcggttttg atggtatggg
     2701 tag
//
LOCUS       DANLTI010000198         2688 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.203, whole genome shotgun sequence.
ACCESSION   DANLTI010000198 DANLTI010000000
VERSION     DANLTI010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.203"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(34..2661)
                     /gene="alaS"
                     /locus_tag="PXB09_002599"
     CDS             complement(34..2661)
                     /gene="alaS"
                     /locus_tag="PXB09_002599"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDL5234653.1"
                     /translation="MKTTSDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMN
                     QFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYF
                     KQDAIKFGWEFLTSPQWLGLPKEKLYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNK
                     GAPYASDNFWAMGDTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQF
                     NRLADGTMEKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLD
                     NKSLRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGNILGAKEAFFYKLV
                     PTLATVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGE
                     VAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIK
                     VDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGD
                     SGQISAEICNFEVVDTQKYGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSA
                     THLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENI
                     QVIIEEMDIESAKAKGAMALFGEKYGEVVRVVEMSDFSIELCGGTHVKQTGDIGLFKI
                     TSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHSFVEKIVQLQEKAK
                     RTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLENVEPKALRTMVDDLKNQLG
                     SAVVVFATTAEDKVNLIVGVTKDLTDKVNAGQLVGAMAEKVGGKGGGRPDMAMAGGSE
                     PQHLLQALSLAQEWITAKL"
BASE COUNT          738 a          623 c          473 g          854 t
ORIGIN      
        1 taaaggcgag ttcagctcgc cttgttatta tttttaaagt tttgctgtaa tccattcttg
       61 agcaagtgac aatgcttgca ataaatgttg tggttctgag cctccggcca ttgccatatc
      121 aggacgtccg ccccctttac ctcccacttt ttcagccatt gcaccaacta attgaccagc
      181 attgacttta tcggttaaat ctttggtcac acctacaatc aaattgactt tatcttccgc
      241 cgtagtcgca aatacaacaa ctgcactgcc taattgattt tttaggtcat caaccatcgt
      301 tctcaatgct tttggttcaa cattctctaa ttgttgaatc actacattca cgccattgat
      361 ttgggtagct tgtttggcta aatctgaacc tgcttgtgct gcaagtttat cttttagctg
      421 ttgaagctct ttttctgtac gtttagcctt ctcttgtaat tgaacaattt tctcaacgaa
      481 tgaatgactg tctgctttta acaattcagc actttgttga acggcttgtt gtaaggtatg
      541 caaccaagca atcgcatttt caccagtgac agcctctata cggcgtacac ctgctgctac
      601 cgcaccttca gaggtaattt tgaataagcc aatatcaccg gtttgtttaa cgtgtgtgcc
      661 gccacaaagt tcaatcgaga aatctgacat ttccactaca cgcactactt cgccatattt
      721 ttcaccaaat aacgccattg cacctttcgc ttttgcagat tcaatatcca tttcttcaat
      781 gattacctga atattttcac gcactttagc attcacgata cgttcaactt cttcaagttg
      841 tgatttagta attgcttccg gctgagaaat atcaaaacgt aaaatatttt ctgacactaa
      901 tgagcctttt tgagcaacgt ggtcgcctag cacttggcgt aacgcagaat gcagtaagtg
      961 ggtagcactg tggtttaatg taatagcatg acgacgctct ctatctacga tcgtattaac
     1021 tttgtcgcca acagaaagtg agccggaagt taattgccca atatgcccga atacttgacc
     1081 atatttttgc gtatctacta cctcaaaatt gcaaatttct gcggaaattt gaccgctatc
     1141 tcccacttgt ccgcccattt ctgcatagaa tggggtttta tctaaaatca ctaccgcatt
     1201 ttcacccgat tgaatagact caaccgattt tccattacta aataacccaa ttacagtagc
     1261 atcatttaag ctggtttcag tatatccact aaagcatgtt ttactgtcca ctttaatcac
     1321 attgttataa tctgtgccaa agctactgct ggctttcgca cgctcacgtt gtgcggtcat
     1381 ttctgcattg aagccgtctt cgtcaatttt aatatcacgt tcacggcaaa catctgcggt
     1441 taaatctaac gggaagccat aagtatcata aagtttgaac gcaacttcgc cagataaggt
     1501 gttattttca accttcgcta atgcttcttc taataaattc aatccacgct caagagtacg
     1561 ggcaaattgc tcttcttctg ctttgagtgt cttttgaata tgcgcttgtt tttgggtcag
     1621 cacctcacca gcttgcccca ttaccgttgc aagtgttggc accaatttat agaaaaaggc
     1681 ttcttttgca cccaaaatat taccgtgacg aaccgcccgg cggataatac ggcgtaatac
     1741 atagcctctt ccttcatttg aaggtaaaac accatcggca atcagatagg aacaagcacg
     1801 aatatggtct gccactacac gtaaagattt attatctaaa tctttcacat taagcaaagt
     1861 agcgacttct ttaattaaag tttggaaaat atccgtttcg tagttggagt ttacgtgttg
     1921 cattaccgca gtcatacgtt ctaaccccat ccctgtatct acagaaggct taggcagttt
     1981 ttccatcgta ccgtctgcta aacgattgaa ctgcataaat acaatattcc atacctcaat
     2041 atagcggtcg ccatcttctt ctgggctacc cggtaagcca ccccaatgtt caggcccgtg
     2101 atcatagaaa atctcggtac aagggccaca agggccggta tcgcccatcg cccagaagtt
     2161 atctgaagca taaggtgcgc ctttattatc gccaatgcga ataatatgtt ccgatggtac
     2221 acctacttct ttatgccaaa tatcgtaggc ttcatcatca gtttcataca cagttacata
     2281 taatttttct tttggtaagc caagccattg tggagaagtt aaaaactccc aaccgaattt
     2341 gattgcatct tgcttgaagt aatcaccaaa gctgaaattc cccatcattt caaaaaaagt
     2401 atgatggcga gcggtataac ctacgttttc taaatcattg tgtttaccac ctgcacgtac
     2461 acaacgttgt gccgtagtcg ctctgctata agggcgtttt tctaacccaa gaaaaacatc
     2521 tttgaattgg ttcatgcccg cattggtaaa taataatgtc ggatcattct cgggaacaag
     2581 agagctgctt ggaacaatcg tatgtccttt agtttggaaa aactctagaa aagattgtct
     2641 gatatctgaa gttgttttca ttaaaaatca ctctttttgt aaatagaa
//
LOCUS       DANLTI010000199         2678 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.204, whole genome shotgun sequence.
ACCESSION   DANLTI010000199 DANLTI010000000
VERSION     DANLTI010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.204"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            139..579
                     /locus_tag="PXB09_002600"
     CDS             139..579
                     /locus_tag="PXB09_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5234654.1"
                     /translation="MTACKNGLGFLVLRLFLAYEFFEAGLSKLNGENWFASIQESFPF
                     PFNVLPADLSWAIASGAEILLPILLTLGLFTRFSALGLMILTAVAWYAVHAGNGYNVC
                     NNGYKMALIYLVMLVPLLLQGAGSLSLDFLLQKKSPTKRWLKFL"
     gene            605..892
                     /locus_tag="PXB09_002601"
     CDS             605..892
                     /locus_tag="PXB09_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234655.1"
                     /translation="MKKATLMALAGALTMATATVNAETKSVKADACMEVKDGKCVKTK
                     ATEGKCGEGKCGATSSEPKATEGKCGEGKCGATAPKAAEGKCGEGKCGASK"
     gene            993..1916
                     /locus_tag="PXB09_002602"
     CDS             993..1916
                     /locus_tag="PXB09_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HDL5234656.1"
                     /translation="MLKFTGAGLGYRRDLADGFLSLTDNNIINFMEVAPENWLKMGGQ
                     ARYNFDKVAEKIPVIIHGLSLSLGGQAPLDMTLLKGIKNMQQQYNSFFFSDHLSYCEC
                     EGHLYDLLPMPFTDEAVHHVANRIKQVQDYLGMQISLENTSYYLHSPTSTMNEVEFLN
                     AIAQEADCGIHLDVNNIYVNGVNHGLLDPFVFIDQVDKSRVNYIHIAGHDEDHGAAED
                     VKMTEGESFNMVKGELRHLPTLLVDTHGEAVQKTVWDLLEYTYEHLPHIPPTLLERDF
                     NFPPFQELISEVQHIMSLQKKYAKTRLKNAA"
     gene            1906..2646
                     /locus_tag="PXB09_002603"
     CDS             1906..2646
                     /locus_tag="PXB09_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDL5234657.1"
                     /translation="MPLKLVEEHKPLLKEIQAEFANAIRHNDVKLMSGNISPQRLGVY
                     SRLVRNNTLGFIDRCYVQLPQHLSPEEWVAVKEKFIREGKAHSPFFQDIAGEFLNFCR
                     ENGCMPPHLLELMDFENAQLLAEVSMATVPSEFEWDNDTIMQFSGAAELRQYAVNFIR
                     SEFKQFDFEPTNVLIWRDTEFGIYYNRLEELDFFLLSSLQEGANSLNGLLAELSEFTE
                     QNLELKALLRQLWEKWVEAEVIYPVYPE"
BASE COUNT          801 a          531 c          571 g          775 t
ORIGIN      
        1 ctataaaaat aggttataat ttttcacaca ttttttgtaa taaacgtata cttattctgt
       61 ctaataatca catttttagt taggagcatt tttatgtcat cattttcgtc atcattttca
      121 actcagtcag cttgctcaat gacagcttgt aaaaacggct tgggctttct tgtattacgt
      181 ctatttcttg cttatgaatt ttttgaagca gggttatcaa aactaaacgg tgaaaattgg
      241 tttgcctcaa ttcaagagag cttcccattc ccctttaacg tactaccagc cgatcttagc
      301 tgggctattg ctagcggagc ggaaatctta ctgcctattt tactcacttt gggtctgttc
      361 acccgcttca gtgcgttagg attaatgatc ttaacagcgg tagcgtggta tgctgttcac
      421 gctggcaatg gctacaatgt ctgcaacaat ggctataaaa tggcactcat ttatttagtg
      481 atgttagtac cacttttatt acaaggtgct ggctcgctct ctctcgattt tctgttacag
      541 aaaaaatccc caaccaaacg ctggttgaaa ttcctttaat cccttaattt atggagaatt
      601 tttaatgaaa aaagcaactt taatggcatt agctggtgca ttaactatgg caaccgcgac
      661 tgtaaacgct gaaactaaat cagtgaaagc agatgcttgt atggaagtaa aagatggcaa
      721 atgtgtaaaa accaaagcta cagaaggtaa atgtggcgaa ggcaaatgtg gagcaacctc
      781 ttctgagcca aaagcaaccg aaggtaaatg cggcgaaggg aaatgtggag caacggcacc
      841 aaaagcggca gaaggtaaat gcggtgaagg caagtgtgga gcttctaagt aagtagcgaa
      901 ggtgcgtttt ctaaacgcac ctaacctctt ataaacacaa tctacaagcg gttaaattcc
      961 gctgattttt tgcaaattaa aggaacaaga cgatgttaaa atttactggt gccggtctag
     1021 gctatcgccg tgacctagcg gacggatttt tatctctcac agataacaat ataattaatt
     1081 ttatggaagt agccccagaa aactggctga aaatgggcgg tcaggctcgg tataacttcg
     1141 ataaagtcgc tgaaaaaatc cctgttatta ttcacggttt atccctctct ctcggcgggc
     1201 aagcgccttt agatatgacg ctactaaaag ggatcaagaa tatgcagcag cagtataact
     1261 cctttttctt ctctgatcat ttaagctatt gcgaatgtga agggcattta tatgacctgc
     1321 tgccaatgcc gtttaccgat gaagccgtac atcacgtggc aaatcgcatt aaacaagtgc
     1381 aagattattt aggtatgcaa atttcccttg aaaatacgtc ctactatctg cattcaccaa
     1441 ccagtacgat gaatgaggta gagtttctca atgcaattgc ccaagaagcg gattgtggca
     1501 ttcaccttga tgtgaataat atttatgtta atggtgtcaa tcacggcttg cttgatccat
     1561 ttgtatttat tgatcaagtg gataaatctc gtgtcaatta tattcatatt gcaggccacg
     1621 atgaagatca cggtgcggcg gaagacgtta aaatgaccga gggtgaatca tttaatatgg
     1681 taaaaggcga actacgtcat ctgccaactt tactggtcga tacacacgga gaagctgtac
     1741 aaaaaactgt gtgggattta ctagagtaca cctatgaaca cctaccgcat attccaccaa
     1801 cactgttaga acgggatttc aacttcccac cgtttcaaga actgattagt gaagtacagc
     1861 acattatgag cttacagaaa aaatatgcaa aaacgaggct aaaaaatgcc gcttaaactc
     1921 gttgaagaac acaaaccgtt actcaaagag attcaagccg agtttgcgaa tgcaattcgc
     1981 cataacgatg taaagctgat gagtggtaat atctctccac agcggcttgg cgtctattct
     2041 cgcttggttc gcaataatac tctcggtttt atcgaccgtt gttatgtaca gctccctcaa
     2101 catctaagtc ctgaagaatg ggttgccgtt aaagaaaaat ttatacgaga aggtaaggct
     2161 cattcgccct ttttccaaga tattgctggc gaatttctca atttttgccg agaaaatggc
     2221 tgtatgccac cacacttgct tgagttgatg gactttgaaa atgctcaatt actggctgag
     2281 gtatcaatgg caaccgtacc atcagaattt gaatgggata acgatactat aatgcagttt
     2341 tctggtgcag ctgagctgcg tcaatatgcg gtaaacttta tccgtagcga gttcaaacag
     2401 tttgactttg agccgaccaa cgtactgatt tggcgagata cggaatttgg catctattac
     2461 aaccgcttgg aagagctgga tttcttcctg cttagctcgt tgcaagaggg ggcaaattcc
     2521 ctgaatggct tactagcaga actcagcgag tttaccgagc aaaatctgga gctaaaagcc
     2581 ttgttacgcc aactttggga aaaatgggtt gaagcagagg tgatttatcc tgtctatcct
     2641 gaatgaggat aaggtatgtg atatgtactg acatacat
//
LOCUS       DANLTI010000200         2654 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.205, whole genome shotgun sequence.
ACCESSION   DANLTI010000200 DANLTI010000000
VERSION     DANLTI010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.205"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(116..191)
                     /locus_tag="PXB09_002604"
     tRNA            complement(116..191)
                     /locus_tag="PXB09_002604"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(156..158),aa:Thr,seq:ggt)
     gene            complement(195..269)
                     /locus_tag="PXB09_002605"
     tRNA            complement(195..269)
                     /locus_tag="PXB09_002605"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(234..236),aa:Gly,seq:tcc)
     gene            complement(313..397)
                     /locus_tag="PXB09_002606"
     tRNA            complement(313..397)
                     /locus_tag="PXB09_002606"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(361..363),aa:Tyr,seq:gta)
     gene            complement(432..507)
                     /locus_tag="PXB09_002607"
     tRNA            complement(432..507)
                     /locus_tag="PXB09_002607"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(472..474),aa:Thr,seq:tgt)
     gene            754..1704
                     /gene="coaA"
                     /locus_tag="PXB09_002608"
     CDS             754..1704
                     /gene="coaA"
                     /locus_tag="PXB09_002608"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDL5234658.1"
                     /translation="MSLEKTSKITPFLTFDRQQWADLRKSVPLKLTEQDLKPLLGFNE
                     DLSLEEVRTIYLPLARLIQYYIEENLKRQTVLHRFLGIEPPKVPYIISIAGSVSVGKS
                     TSARILQALLSHYPKERKVDLITTDGFLYPLATLTEKNLLKKKGFPESYDIHSLIRFV
                     SDIKSGKRNVKAPIYSHLTYDIIPNQFNTVDQPDIVILEGLNVLQSGMNYPSSPHNVF
                     VSDFVDFSIYVDAEESLLKKWYINRFLKFRRSAFADPNSYFHHYASLSEQEAIETAST
                     IWEEINGLNLRQNILPSRERANLILIKGQDHAIETVKLRK"
     gene            1857..2396
                     /locus_tag="PXB09_002609"
     CDS             1857..2396
                     /locus_tag="PXB09_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDL5234659.1"
                     /translation="MNKKFLLPLILFLALSVAFLVQLARNSQGDDPKKLESALIGKTV
                     PSFNLESVLDEKQTIDQNIVKTGKPRLLNVWATWCPTCYAEHEYLTILAKQGVEIVGI
                     DYKDERPKAIKFLANYGNPYKAIIFDPKGSLGLDLGVYGAPETFIIDGNGVIQYRHAG
                     DVNDQVWNQVLKPIYDGLK"
BASE COUNT          837 a          539 c          485 g          793 t
ORIGIN      
        1 tttctaaaag cctcttaaac aaaaacggtt acaatggaac aaaagaaccc attaaccata
       61 atgtagaaat taataccaat aaaaatttgc gtgagaaaga tagaattcag agaagtggtg
      121 ctgataggcg gatttgaacc gccgacctca cccttaccaa gggtgcgctc taccaactga
      181 gctatatcag cgcttggagc gggcagcggg aatcgaaccc gcatcattag cttggaaggc
      241 taaggtaata gccattatac gatgcccgct gttctaaatt cgtctgacct acgcgattca
      301 aaatatcaga gatggtggag ggagaaggat tcgaaccttc gaaggctgag ccaacagatt
      361 tacagtctgc cccctttggc cgctcgggaa cccctccacg ataattgaat acttatttac
      421 gcctgagtta atggtgccga ctaccggaat cgaactggtg acctactgat tacaagtcag
      481 ttgctctacc tactgagcta agtcggcgtt gctgtgtcgt aagcaagtga tgtgcattat
      541 agggaaattt taacagcgtg caagtgtttt ttaaaaaaat attaaaaaaa gcgttctttc
      601 gatttttaaa tatacaaaat gactattttt tgtaaaatac aacggatttt ctctgcataa
      661 ctacggcaaa ataagtgcat atattgtata gttacgccct taatttggta tttaattacc
      721 ttaatattcc agcaaaaaat tgagattttg gctatgagcc ttgaaaaaac cagcaaaatt
      781 actccttttc tcacttttga tcgccaacaa tgggctgatt tacgcaaatc cgttccattg
      841 aagctgaccg agcaagacct aaaaccgctt ttaggcttta atgaagatct ttcattagaa
      901 gaagtacgca ctatttattt accgcttgcc cgtttaattc aatactatat agaagaaaac
      961 ttaaaacgcc agacagtctt acatcgcttt ctcggcattg aaccgccaaa agtcccttac
     1021 attattagta ttgccggcag cgtatcggtt gggaaaagta cctctgcccg tattctgcaa
     1081 gctctgctct cccattaccc taaagagcga aaagtggatt taattaccac cgacggtttt
     1141 ttatatccac ttgcaacgct aaccgaaaag aacttactca agaaaaaagg ctttccggaa
     1201 tcttatgata ttcacagcct gattcgcttt gtatctgata ttaaatccgg caaacgcaat
     1261 gtgaaagctc cgatttattc acatttgacc tacgatatta tcccaaatca atttaatacg
     1321 gtggatcaac ccgatattgt gattttagaa gggctaaacg tgttacaaag tggaatgaac
     1381 tacccgtcca gcccacataa tgtatttgta tcggactttg tggatttttc tatttatgtg
     1441 gatgccgaag aaagtttgct gaaaaaatgg tatatcaacc gtttcttgaa attccgccgc
     1501 agtgcctttg ccgacccaaa ctcctatttc caccattatg cgagtttgtc cgagcaagaa
     1561 gcgattgaaa ccgcctcaac gatttgggaa gagatcaacg gcttaaattt acgccaaaat
     1621 attctcccaa gccgagagcg tgccaacctc attttaatca aagggcaaga ccacgccatt
     1681 gaaacggtaa aattacgcaa ataatatttt gcaaataatt gggctttttc gaccgcttgt
     1741 aataccttaa aatccgttga ataccactca acggattttt tatttaaatc aatgcttatt
     1801 caactatttt ttggtaagct aacgactttg agagtgattg atattaggca tatacaatga
     1861 acaaaaaatt tctacttcct ttaattctct ttttggcgtt atctgtggca tttttggttc
     1921 aactcgctcg caactcgcaa ggcgatgatc cgaaaaaatt agaatcagcc ttaattggca
     1981 aaacagttcc gagctttaat ttagaatcgg tattagatga aaaacagaca atcgaccaaa
     2041 atatcgtcaa aaccggcaaa cctcgcctgc ttaacgtgtg ggcaacttgg tgtccgactt
     2101 gttatgccga acacgaatac ttaaccattt tggcaaaaca aggggtggaa attgtcggta
     2161 ttgattataa agacgaacgc ccaaaagcga ttaaattctt agccaattac ggcaaccctt
     2221 ataaagcgat tatttttgac ccgaaaggct cactcggttt agatttaggt gtttatggtg
     2281 cacccgaaac ctttattatt gacggcaacg gcgtgattca ataccgccac gccggcgatg
     2341 taaacgacca agtgtggaac caagtgctta aaccgattta tgatggatta aagtaaatgt
     2401 ttgtatttcc tgctgacatt aagaaatcta taaaaagcaa ttatcaaaga gaatataact
     2461 ttatttttat aatagttggt ttatcaacta ttataggaat aattctaact attttatcct
     2521 catttttatt gctaaactat ttagttagca ttgatgcaag aaatttattc attaactcat
     2581 taaacagtaa cttctcaacc atatttattc ctatagcatt atttttattt ttccctataa
     2641 tgctgatgaa tatg
//
LOCUS       DANLTI010000201         2634 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.206, whole genome shotgun sequence.
ACCESSION   DANLTI010000201 DANLTI010000000
VERSION     DANLTI010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.206"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            152..442
                     /locus_tag="PXB09_002610"
     CDS             152..442
                     /locus_tag="PXB09_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDL5234660.1"
                     /translation="MALRPLHDKVILKREEVETKSAGGIVLTGSAATKSTRGKVIAVG
                     TGRILDNGSVQPLAVKVGDVVIFNEGYGVKTEKIDGEEVLILAEHDILAIVE"
     gene            511..2151
                     /gene="groL"
                     /locus_tag="PXB09_002611"
     CDS             511..2151
                     /gene="groL"
                     /locus_tag="PXB09_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608625.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDL5234661.1"
                     /translation="MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAY
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNE
                     GLKAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDSTVGQ
                     LIAQAMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP
                     YILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVISKDNTTIID
                     GIGDETQIKGRVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEK
                     KDRVDDALHATRAAVEEGIVPGGGVALVRAANKVADTLKGDNEEQNVGIKLALRAMEA
                     PLRQIVANAGEEASVVARNVKEGSGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFA
                     ASIAGLMITTECMITDLPKEEKLDPAAMGGMGGMGGMM"
     gene            complement(2276..2602)
                     /locus_tag="PXB09_002612"
     CDS             complement(2276..2602)
                     /locus_tag="PXB09_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5339 domain-containing protein"
                     /protein_id="HDL5234662.1"
                     /translation="MLKRILGITLCTILVSSNAIASVKTSSLTVAKPTLSKNLPTECE
                     KMFNTANKLVSDAERQPGTHTQVLKMKNKLSLTKQQILKMDSELQQKSCEKGLTALNS
                     LKQKHQ"
BASE COUNT          837 a          428 c          625 g          744 t
ORIGIN      
        1 atatagtttt atcaaaaatg gtcaaatttg taaaaaattt tacaaatttg accgcttgca
       61 cttgaaactc taaaatctgc ctttatattg ttaggcgtta cgcattttgc gtgaagtttt
      121 atttattcat ttttaagaaa aggaacatat tatggcactt cgtccattac acgataaagt
      181 tattttaaaa cgtgaagaag ttgaaacaaa atcggcaggc ggtattgttt taaccggttc
      241 ggcagcaaca aaatcaaccc gtggcaaagt aattgcagta ggaacaggtc gcattttaga
      301 caatggttct gttcagcctt tagcagttaa agtgggcgat gtagtgattt ttaacgaagg
      361 ctacggcgta aaaaccgaga aaattgacgg cgaagaagtg ctaattttag cagagcacga
      421 tattttggcg attgtagaat aatttcgttc tgcacaagcg gttaaaaaag caaaattttt
      481 tacatatttc aaatacaaag gatttagaaa atggcagcaa aagacgtgaa atttggtaac
      541 gatgcacgcg taaaaatgtt aaaaggcgtg aatattttag ccgatgcggt aaaagtaact
      601 ttaggtccga aaggtcgtaa tgtggtgtta gatcgtgctt atggtgcacc aacgattaca
      661 aaagacggtg tgtcggttgc ccgtgaaatc gaattagaag ataaatttga aaatatgggg
      721 gctcaaatgg tgaaagaggt tgcctctaaa gccaatgatg ccgccggtga cggtacaact
      781 accgcaactg tattagctca agcgattgta aacgagggct taaaagcagt ggctgcgggt
      841 atgaacccaa tggatttaaa acgtggtatc gataaagcgg ttgcagcagt ggttgaagag
      901 ttaaaagcga tttcaaaacc gtgcgaaacc tcaaaagaaa ttgagcaagt agggacgatt
      961 tctgcaaact cagattcaac agtcggtcaa ttaattgctc aagcaatgga aaaagtgggc
     1021 aaagagggcg tgattactgt tgaagacggt acaggtttag aagatgcatt agacgtggtt
     1081 gagggtatgc aatttgaccg tggttactta tcgccatact ttatcaataa accggaagcc
     1141 ggtacggttg agttagaaaa cccatatatt cttttagtgg ataaaaaagt gtctaacatt
     1201 cgtgaattat taccggtgtt agaaggtgtt gcaaaagcag gtaaaccgtt attaattatt
     1261 gccgaagata ttgaaggcga ggcgttagct accttagtgg tgaacactat gcgtggtatc
     1321 gtgaaagtgg cggcagtgaa agcacctggc tttggtgatc gccgtaaagc aatgttacaa
     1381 gatattgcga tcttaactgc aggtactgtg atttctgaag agatcggtat ggagcttgaa
     1441 aaagcaaccc ttgaagagct tggtcaagca aaacgtgtgg ttatcagcaa agataacacc
     1501 acaattattg acggtattgg tgatgaaact caaatcaaag gtcgtgtagc acaaatccgc
     1561 caacaaatcg aagattcaac ttcagattac gacaaagaaa aactacaaga gcgtgtagca
     1621 aaattagccg gtggtgttgc ggtaattaaa gtaggtgcgg caactgaagt ggctatgaaa
     1681 gagaaaaaag accgtgttga tgatgctctt cacgcaaccc gtgctgcggt ggaagaaggt
     1741 attgtaccgg ggggcggagt tgctttagtg cgtgcagcca acaaagtggc tgatacacta
     1801 aaaggcgata acgaagagca aaatgtaggt atcaaacttg ccttgcgtgc aatggaggct
     1861 ccattacgcc aaatcgttgc caatgcaggt gaagaagcct cagttgtagc ccgcaacgtg
     1921 aaagaaggtt caggcaacta cggctataac gcaggtacag agcagtacgg cgatatgctt
     1981 gaaatgggaa ttttagaccc aactaaagtg actcgttcag cacttcaatt cgcggcttct
     2041 attgcaggtt taatgatcac tacagaatgt atgattaccg atctgccaaa agaagagaaa
     2101 ttagatcctg ccgcaatggg cggtatgggg ggaatgggcg gaatgatgta attgcccatt
     2161 gagtgaacaa aagctactga aattaattca gtagcttttt tgttggtaac aagtggttaa
     2221 atttatgcta ttttttgcaa ataaaaaacc aagcaagtaa gcttggtttt agcgtttatt
     2281 gatgtttttg tttaaggctg tttagtgctg ttaaaccttt ctcacaactt ttttgctgta
     2341 attcagaatc catttttagg atttgttgct ttgttaaaga aagtttattt ttcattttta
     2401 gcacttgagt atgagtacca ggctgtcttt ctgcatcaga gaccaattta tttgccgtgt
     2461 taaacatttt ctcacattca gttggcaaat ttttacttaa agtaggtttt gcaactgtaa
     2521 gtgatgaggt tttaacactt gctatagcat tactggaaac caatatggta caaagtgtta
     2581 ttcctaaaat tctttttagc atgcgttctc cacacattaa gtgtttaaaa gtaa
//
LOCUS       DANLTI010000202         2602 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.207, whole genome shotgun sequence.
ACCESSION   DANLTI010000202 DANLTI010000000
VERSION     DANLTI010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.207"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..463
                     /locus_tag="PXB09_002613"
     CDS             <1..463
                     /locus_tag="PXB09_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234663.1"
                     /translation="GDRNYQLYIDLATGELVSKLGKGLTTREFDAAVKAFENAFNAKD
                     TAENTSPAESKETEQENKQETTKLVITKPTLKGSEKQIAWADEIINLFIAKIGDTSIP
                     VTATQEQITQAQAMVDNFFAMTNAGKWIEKFKGLNDSSEPKQFWLSVKYGW"
     gene            533..1051
                     /locus_tag="PXB09_002614"
     CDS             533..1051
                     /locus_tag="PXB09_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234664.1"
                     /translation="MTTQVTPQIMRIIGQIVAATYGDDVPTNVQTIILRYPIRGIGFI
                     SSRRELSINNGEIARLMDKIPGDLEDPKDGMPFDCQGAFWLGYYQYCKLSNDVKNYTS
                     KELSIIGESLYGTQWQSNLARDLRLSDARSVREWVAGERKIPFGVWADLTELVKAKKA
                     NLSSILKKLTID"
     gene            complement(1198..1437)
                     /locus_tag="PXB09_002615"
                     /pseudo
     CDS             complement(1198..1437)
                     /locus_tag="PXB09_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1598..1891)
                     /locus_tag="PXB09_002616"
     CDS             complement(1598..1891)
                     /locus_tag="PXB09_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234665.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYKHLKETGQIVV"
     gene            complement(2006..2578)
                     /locus_tag="PXB09_002617"
     CDS             complement(2006..2578)
                     /locus_tag="PXB09_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234666.1"
                     /translation="MNENFRSLSLQRKGRANFSNKIATIQAASDEIIVIKYSDGQVCL
                     LYRENGIATLATENATFAEYLIFSTNVPKSGGYGIEVYNSAGNVVFSSNHKFLRPIEY
                     VDLNPSKNVFRFTGQANRQYGIILSNFGFDFVINYDNGYSTSRSAKVSGNFIEFGFCK
                     YHYSGLYKTGMSYNSKAMYFNALVVDITGY"
BASE COUNT          840 a          483 c          489 g          790 t
ORIGIN      
        1 aggtgatcgg aattatcagt tgtacattga cttagccaca ggtgagttag tgagcaaact
       61 tggcaaagga ttaacaacaa gagagttcga cgctgccgta aaagcatttg agaacgcttt
      121 taatgctaaa gacaccgctg aaaatacatc gccagcagaa agcaaagaaa cagagcaaga
      181 gaacaaacaa gaaacaacta agcttgtaat cacaaaacca acattaaaag gctctgaaaa
      241 acaaatcgct tgggcagacg aaatcatcaa tctttttatt gcgaagattg gtgatacctc
      301 tatcccagta acagcaacgc aagaacaaat tactcaagct caagcaatgg tagataattt
      361 ttttgcaatg acaaacgctg gaaagtggat cgaaaaattt aaaggtctaa atgatagtag
      421 cgaaccaaag caattttggt tatccgtaaa atatggatgg tagattgaga taacaaataa
      481 gccgtaagag caaaggctta cggctaaaac aaacagataa ctggagatta ttatgactac
      541 acaagtaaca ccacaaatta tgcgcattat cgggcaaatt gtcgctgcta cttatggtga
      601 cgatgtgcca acaaacgtac agacaataat cttgagatac cctataagag ggatagggtt
      661 tatctctagt cgcagagagc tatctattaa caatggagag atagcaagat taatggataa
      721 aataccaggc gacctcgagg accctaaaga cgggatgcct tttgattgtc agggggcgtt
      781 ttggcttgga tactatcaat actgcaaatt aagtaacgat gtaaaaaatt acacatcaaa
      841 agagctatcc atcattggcg agtcattgta tggcactcaa tggcagtcta atctagcgag
      901 agatttgaga ttatctgatg ctcgcagtgt ccgcgaatgg gtggctggtg aacgtaaaat
      961 ccctttcggg gtttgggctg atttgaccga attggttaaa gccaaaaaag ctaacttatc
     1021 atcaattctt aaaaaattaa caatagatta gcactgactt taaagcccct ctcggggctt
     1081 aattatagaa aataaaatca caatggctaa ttttgccaaa tttgcctgtt aaaacgtgcg
     1141 aaaaattaca aaaaacggct agagctatag ccgttttgag tgcagatgtt aacagagtta
     1201 agctctagca cgtcctgggc cttgatactg cacaccatca gttaaatgat cttgattttc
     1261 ggttgctgct acagcagatt ctgatcttac atttaaactt tgtgactgtt gtaatgcatc
     1321 aataagttta tttaccactg ttccgagtgt tttaatttgc tcggtttgct cattaatagt
     1381 ctgctttaac tcttgcagtt ttaatgattg ctcatccaca accactaatc gacggttagc
     1441 tcaatttgag gctctgtgct gccctctact atggcgtgta aatccagcct aataccctct
     1501 aaatttacag gctcgccatt tgtttgccta aaaaaaaggc gataacttac gtcatcgcct
     1561 ctgaaaaact taaatttatg cttttgcatt tagaccccta cactacaatc tgccccgtct
     1621 cttttaagtg cttatagata cgacctaaca taatctgcgt tggcgttttg ccaatatcct
     1681 cttttgttag cggtgcatct gtaatcgctt tggctgattg agcatcaata tatttgtact
     1741 cacttgtgat gattacaaag tttgttacct cgccatcggt atcatcacct gtgccaacaa
     1801 catacttagc attgagtgag ccgtcatctt gagttgagta acttgcgata gttgagtaca
     1861 ttgggtttaa gattttgtta aaagttgtca taatttttcc ttttgtggat tgttgataaa
     1921 aaaagaccgc ttgtattgct acaagcggcg atgaatgtgt aatcagaatt ttagttcgcc
     1981 tctattaaat gaaggcgttt aatgtttaat agcctgttat atctacaacc agagcattaa
     2041 aatacattgc ttttgaatta taactcattc ccgtcttata caaaccagaa taatggtatt
     2101 tacagaaccc aaattcaata aaattaccac ttactttggc agatctagat gttgaatatc
     2161 cgttatcgta gttaatgaca aaatcaaagc caaaattgga taagataatg ccatattgcc
     2221 tatttgcttg ccctgtaaat ctaaaaacat tttttgatgg atttagatcg acatattcaa
     2281 taggtcttaa aaatttgtgg tttgatgaaa atacaacatt tcctgctgag ttataaacct
     2341 ctatgccgta acctccgctt ttcggtacat ttgtactaaa aatgagatat tcagcaaatg
     2401 ttgcgttttc tgtagctaat gtggcaatac cattttctcg atatagcaaa catacttgcc
     2461 catcagaata tttaatgaca ataatttcat ctgacgctgc ctgaatagtt gcaattttat
     2521 tagaaaagtt agctcgtcct tttctttgta aggataaact tctgaaattt tcattgatgt
     2581 taaaagtaga tagtccgtaa ct
//
LOCUS       DANLTI010000203         2571 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.208, whole genome shotgun sequence.
ACCESSION   DANLTI010000203 DANLTI010000000
VERSION     DANLTI010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.208"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..395)
                     /locus_tag="PXB09_002618"
     CDS             complement(<1..395)
                     /locus_tag="PXB09_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5234667.1"
                     /translation="MRSMFKKFFGKNKSQSAVKSDTIFSIEQDNEGWLYPEKASQLLN
                     TELRQKYLGLLWQQVSMNRQMFEVLYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKVRQSYILPPNVAPEEQSKQR"
     gene            complement(499..963)
                     /locus_tag="PXB09_002619"
     CDS             complement(499..963)
                     /locus_tag="PXB09_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArdC family protein"
                     /protein_id="HDL5234668.1"
                     /translation="MMNTQQPKFDLYQHITDRIIAALEQGTAPWLKPWSHPECNMALP
                     RNAVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRP
                     NEREKLDEEGNIVYDEEGNPEMEQHFFIAKHNLFNLDQCENLPAELYDPVIP"
     gene            1172..1435
                     /locus_tag="PXB09_002620"
     CDS             1172..1435
                     /locus_tag="PXB09_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme-like superfamily protein"
                     /protein_id="HDL5234669.1"
                     /translation="MRPVTRNNRGTSFDPRHNKYINTLATALLARWHIEQFSERNIPV
                     NDENLYMAHNIGLDGFHRALLGQSTRKDIENMRKNGMKPWMSI"
     gene            complement(1519..2544)
                     /locus_tag="PXB09_002621"
     CDS             complement(1519..2544)
                     /locus_tag="PXB09_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5234670.1"
                     /translation="MTAGDTPHDTLKTLVGALKDTREEARKANERGDRFEQEVLRLQA
                     REAEVDSRIAGEVESRVESRLAAAWDGFNRQIEELKGRVQSGNQQQKEAEAIPVGGAS
                     SGFGTESAGQTGNVDNNGIRWVDPDDMVVTDEQGKPVTGNYSGKTKTGFPSPFKAEGE
                     SSNTGTALNNNAGTENMTGNTQIQQIKRTPYYTIPENSTLMGSTAMTALLGRVPIQGA
                     VTDPFPFKVLIGRENLIANGIDLPDVEGAIVSGTSTGDWTLSCVRSEVTSITFVFADG
                     RISNGRASGESRAVKRNQASNLTPFCLTVSLSGFNDIPHSDGNPGFLTMSAVDYVDVY
                     LMSHLAR"
BASE COUNT          706 a          580 c          494 g          791 t
ORIGIN      
        1 tctcgttgct ttgattgttc ttcgggagct acattcgggg gcaaaatata gctttgacga
       61 actttagctg aaaaagcaat aacttctaaa ccgtgatcaa gcattccacc gatatgtgaa
      121 tgatggtgtg attcagaagc tggtaatagt tgaaccatct cagcgtaacg ttctattggc
      181 tgctgataaa gtacctcaaa catttgacgg ttcattgata cctgttgcca aagtagccca
      241 agatattttt gtcgtaattc tgtattaagt aattgagagg ctttttccgg gtataaccac
      301 ccttcattat cttgctcaat agaaaaaata gtatcggatt tgaccgcact ttgagattta
      361 tttttaccaa aaaatttttt gaacattgaa cgcattggaa gagaccgaaa atatgaatgc
      421 tgtattgaat gaaagccgtt tagccctttg cccttttggg taagaccttt ccccttggaa
      481 aggttactct tatccccctt aggggattac aggatcgtac agttccgccg gtaaattttc
      541 acactggtct aaattgaaca gattgtgctt agcaatgaaa aagtgttgtt ccatttccgg
      601 atttccttcc tcgtcataca caatatttcc ctcctcatcg agtttttctc tctcattagg
      661 acggtagttc atcacaacag tagctttttc ccctttacgg atatatccgc cgagttcatt
      721 ggcttttttc gccgtaatcc acttacactg tttgtagccg tgttcagcgg tagcaatcca
      781 aagcaataac gtattgatac cggaatacag acggttagaa accgcattgc gaggtaatgc
      841 catattgcat tccggatggc tccacggttt taaccacgga gctgtacctt gttccaatgc
      901 agcaatgatt ctatcagtaa tatgttggta taaatcaaat ttaggttgtt gagtgttcat
      961 catgtgtttc tccaaagttt gggtaaaaaa atggggaaac acggttaccc tatggggaac
     1021 ttgtttcccc gatgggtagt ttataaaatt tcaatggcca caatttttct agaatcatca
     1081 aagccaacag aactgcctat ggcgtagtaa ttacgaatag tctgttcatc ggcattgatt
     1141 agcagatacc tatcgaggaa gagagattgg gatgagaccg gtaacgagaa ataatcgtgg
     1201 aaccagtttt gaccctcgtc acaataaata catcaataca ttggcaaccg cattattggc
     1261 acgttggcat attgagcaat tctctgagcg taatatccca gtcaatgatg aaaatctcta
     1321 tatggctcac aatattggct tagatggttt ccatcgagcg ttattagggc aatctactcg
     1381 taaagacatt gagaatatgc gtaagaatgg gatgaaacct tggatgtcca tttagctctg
     1441 ttttcaaatg acctaatcca gtttgttccg gagagagtac cgaaattttg cactctttca
     1501 tccgtggtgt atcaaacttc aacgtgctaa atgagacatt aaatatacat caacataatc
     1561 taccgcactc atcgttaaga aaccgggatt cccatcagaa tgaggaatat cgttaaagcc
     1621 cgataaggag acggttaaac aaaatggtgt taaattactt gcttgatttc gtttcacagc
     1681 tctgctttct ccactcgctc gcccattcga aatacgaccg tctgcaaaca caaaggtaat
     1741 gctcgttacc tcagaacgaa cgcaagatag cgtccaatct ccggttgatg taccggatac
     1801 aatcgccccc tcaacatcag gtaaatcaat gccattggca attaaatttt ctcgcccgat
     1861 taatacttta aacggaaacg gatctgtcac agcaccttga ataggtacac ggcctaacaa
     1921 tgccgtcatc gcagtagaac ccattaaagt cgaattttcg ggaatagtgt aataaggtgt
     1981 acgctttatt tgctgtatct gagtattacc agtcatattt tctgtcccag cattattatt
     2041 taatgctgtc ccagtatttg aactttcccc ctctgcttta aaagggcttg gaaagccggt
     2101 ttttgttttc ccggaataat tgcctgtaac cggtttacct tgttcatcgg ttaccaccat
     2161 atcatcagga tcgacccagc gaatgccatt gttatctaca ttccctgttt gtcctgctga
     2221 ttcagtccca aagccagaag aagcccctcc tacagggatt gcctctgctt ctttctgctg
     2281 ctgattacca ctttgaaccc gacctttcag ttcttcgatt tggcgattaa atccatccca
     2341 agcagcagcc aaacggcttt ctacacgact ttctacttca cccgcaatac gagaatccac
     2401 ttcggcttct cttgcttgta agcgtaatac ctcttgctca aagcgatcac cacgctcatt
     2461 tgctttacga gcttcttcac gagtatcttt taatgctcct accaacgttt ttaatgtatc
     2521 gtgaggcgta tctcctgcag taatacctaa tgtattcgcc tcctcatcac t
//
LOCUS       DANLTI010000204         2541 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.209, whole genome shotgun sequence.
ACCESSION   DANLTI010000204 DANLTI010000000
VERSION     DANLTI010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.209"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(8..292)
                     /gene="raiA"
                     /locus_tag="PXB09_002622"
     CDS             complement(8..292)
                     /gene="raiA"
                     /locus_tag="PXB09_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDL5234671.1"
                     /translation="MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQ
                     PNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLEGQLIKLKEKNEH"
     gene            472..1413
                     /locus_tag="PXB09_002623"
     CDS             472..1413
                     /locus_tag="PXB09_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HDL5234672.1"
                     /translation="MSEKKQLPPFQTQFLHPKYWGLWLGLGVFKLILCLPYPILVKIG
                     LGLGKLFTKLGFGKRRMRIARRNLELCFPHYSAEKVEELVEENMKSVGMAIIETGMAW
                     FWSDKRILKWSKIEGLEHLTQRDQERGILLVGVHFLTLELGARIIGLHHQGVGVYRPN
                     DNPLLDWIQFRGRVRSNKAMLDRKDVRGMIRALKNGEMIWYAPDHDYGRRNSVFVPFF
                     AVEETCTTAGSYMLLRSAPKSLVIPFSPIRNLDYSGYTVKVSPAVDFSQCQNEVETAI
                     LMNRVVEREIMAALTQYMWLHRRFKTRPNEGDQSLYD"
     gene            1509..2396
                     /gene="dapA"
                     /locus_tag="PXB09_002624"
     CDS             1509..2396
                     /gene="dapA"
                     /locus_tag="PXB09_002624"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDL5234673.1"
                     /translation="MATPLFHGSIVALVTPMTHGEVDYQDLKKLVEYHIQAGSHAIVS
                     VGTTGESTTLSIDENVKVIKKTVEFADGRIPIIAGTGSNATSEAITMTKLLANSGVAG
                     CLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAKIENI
                     VAVKEATGDLSRLPLIKQLAGEDFIFLSGDDATGFESMKLGGQGVISVTNNVAAADMA
                     KMCELALAGQFTEAEEINNRLMALHHDLFVESNPIPVKWAAYKLGLISEPNLRLPLTT
                     LSESAQPVVLKALQQAGLI"
BASE COUNT          783 a          392 c          524 g          842 t
ORIGIN      
        1 ttaaacatca atgttcattt ttctctttta gtttaattaa ctgaccttct aatttcttct
       61 taacatcaaa aattgcagta tataaatctt catgttcagc tttagcgact aaatcaccta
      121 aaggggtgcc aattgttgct tcaacttgga atgagttagg ttgttttatc agcataaaat
      181 gtgggtttat caattgggtg tggtattttt ctaacttagc taaacgctcc tcaatatgag
      241 tacggattgc aggggtaatg tccatttgtt tgcttgaaat atttaatgac ataacatttt
      301 cctcttgttt agttaaggct tttgccgttg atattctaat aaccaaaata tgctcatcac
      361 tccaaaaatt caagtgaaaa atgaaataag tttccaaaaa tttgatctac ttaacacttt
      421 tagcagtttt tagctataat gtaatcataa tctagtatgt gagaataatt aatgagtgag
      481 aaaaaacagt tacctccatt ccagacacaa tttttacacc ctaaatattg gggattgtgg
      541 ctcggtttag gtgtttttaa gttaatttta tgtttgcctt atcctatttt agtaaaaatt
      601 ggtctgggac taggtaaatt gtttactaaa ttgggttttg gtaaacgtcg tatgcgtatt
      661 gctcgccgta atttagagct ctgttttccc cattactctg ctgagaaagt agaggaatta
      721 gtcgaagaaa atatgaaatc ggttggaatg gcgattattg aaactggtat ggcttggttt
      781 tggtcggata aacgtattct taaatggtct aaaatcgaag ggctagagca tttaacacag
      841 cgtgatcagg aaaggggtat tttacttgta ggggtgcatt ttctgacttt agaactcggt
      901 gcaagaatta ttgggctaca tcatcaagga gtaggggttt atcgaccgaa tgataatcca
      961 ttattagatt ggatacagtt tcgaggacgt gttcgctcaa ataaagcgat gttagatcgt
     1021 aaagatgtgc gtggaatgat tcgagcttta aaaaatggcg agatgatatg gtacgcgcct
     1081 gatcacgatt atggaagacg aaatagcgtt tttgtaccat tttttgcagt ggaggaaact
     1141 tgtactactg cgggtagtta tatgttactt cgttctgccc caaagagttt agtgatcccg
     1201 tttagcccga ttcgaaattt ggactattca ggctacacag taaaagtcag tcctgccgtt
     1261 gattttagtc aatgtcaaaa tgaagttgaa acggctattt taatgaatcg ggtggtagaa
     1321 cgtgaaatta tggctgcgct aactcaatat atgtggctac atcgccgttt taaaactcgc
     1381 ccaaatgaag gtgatcaaag cctatatgat taattttaaa taatttcaaa aaagtgcttg
     1441 catatttaag ctgaattttg caatctagca atgttatcaa gcataataaa aaaatacagg
     1501 agatgattat ggcgacccct ttatttcacg gtagtatcgt agcattagtt acaccaatga
     1561 ctcatggtga ggtagattat caggatttaa aaaaattagt tgagtatcat attcaagcag
     1621 gttctcacgc tattgtatct gttggtacaa caggtgaatc taccacatta agcattgatg
     1681 aaaatgttaa ggtgattaag aaaacggttg aatttgctga tggacgtatt ccaattattg
     1741 caggaactgg ttctaatgcg accagtgaag ctatcactat gactaaatta ttagcaaaca
     1801 gtggtgtagc tggttgttta agtgtagtgc cttattacaa caagccaacg caagagggga
     1861 tgtacttaca ctacaaagcg attgcagaaa gtacagattt accacaaatt ctgtataatg
     1921 tgccggggcg aacagggagt gatttaaaac ctgaaacaat cggtcgctta gcgaaaattg
     1981 agaatattgt tgctgtgaaa gaagcaacgg gtgatttaag ccgcttacct ttaattaagc
     2041 aattagccgg tgaagatttt attttcttaa gtggtgatga tgctaccggt tttgagtcta
     2101 tgaaattagg tggtcaaggg gtgatctcgg tcaccaataa tgttgctgct gctgatatgg
     2161 caaaaatgtg tgagttagct cttgccggtc aatttactga agcagaagaa attaataacc
     2221 gcttaatggc gttacaccat gacttatttg tcgaatctaa cccgattccg gtgaaatggg
     2281 ctgcttataa attaggttta attagtgagc ctaatttacg tttaccgctt accacactgt
     2341 ctgaatcagc acagcctgta gtgttaaaag cattacaaca agcgggctta atttagttat
     2401 tttttgcaaa tcaaatttga aaccggttaa gttaattcta accggttttt tcatatctaa
     2461 aagaaatttc cacataaaaa taaaattcta aatttctttg atttaagtaa aatttaattt
     2521 tgtttgatgg atttttactc g
//
LOCUS       DANLTI010000205         2446 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.210, whole genome shotgun sequence.
ACCESSION   DANLTI010000205 DANLTI010000000
VERSION     DANLTI010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.210"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            168..1739
                     /gene="guaA"
                     /locus_tag="PXB09_002625"
     CDS             168..1739
                     /gene="guaA"
                     /locus_tag="PXB09_002625"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDL5234674.1"
                     /translation="MTNIHHHKILILDFGSQYTQLIARRVREIGVYCELWAWDVTEEQ
                     IREFNPTGIILSGGPESTTEENSPRAPEYVFNAGLPVLGICYGMQTMAMQLGGLTETS
                     DHREFGYASVALKSADQLFANLNDDLTACEPKLDVWMSHGDKVTKLPPHFTITGVTPT
                     CPIAAMSDESRRFYGVQFHPEVTHTKQGLALLKNFVVGICGCETNWTAENIIEDAVKR
                     IREQVGDDEVILGLSGGVDSSVTALLLHRAIGKNLHCVFVDNGLLRLNEGDQVMEMFG
                     NKFGLNIVRVNAEDRFLEALKGLDEPEAKRKTIGKVFVDVFDDESKKLSSVKWLAQGT
                     IYPDVIESAASKTGKAHVIKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLALGLP
                     AEMLNRHPFPGPGLGVRVLGEIKKEYCDLLRKADAIFIEELHKAGWYYKVSQAFTVFL
                     PVKSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDLLGKISNRIINEVNGISRV
                     VYDVSGKPPATIEWE"
     gene            complement(1900..2295)
                     /locus_tag="PXB09_002626"
     CDS             complement(1900..2295)
                     /locus_tag="PXB09_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcB family protein"
                     /protein_id="HDL5234675.1"
                     /translation="MEQWTTDVWAAIMAAFIVGAVIGCTLVRVFNSSVRKQHELEKEL
                     KQTKTQVDEQKQKLEQHFEQSAQLLSSLASDYKKLYTHLAQSSEKLLPEASKNITFFQ
                     QTKLPIPAEKTEEDQPRDYSEGSSGLLKS"
BASE COUNT          687 a          513 c          566 g          680 t
ORIGIN      
        1 aattcataca aaaatcatca atattccaag tgaaggtaat gcaaaagaac tttggactgc
       61 aacaggttgt aataaaacgc aatcttttat tattacatat agaaacgatg gggtaggcgg
      121 cacttttatt aacatgacca caacgccata atttaaagga aattacaatg acaaacatcc
      181 accaccacaa aattttaatt ttagacttcg gttcacaata tactcagctt atcgcacgcc
      241 gtgtgcggga gattggggtt tactgcgagc tttgggcttg ggacgtaacg gaagagcaga
      301 tccgtgaatt taacccaacg gggattattc tttcaggagg tcctgaaagc accactgagg
      361 aaaacagccc acgagcgccg gagtatgtgt ttaacgctgg tctgccagtg ctgggcattt
      421 gctacggaat gcagacaatg gcgatgcagt tgggcggttt aaccgaaacg tccgaccacc
      481 gtgaatttgg ctatgcctcg gtggctctca aatctgccga tcaacttttt gcaaatttaa
      541 acgatgattt gaccgcttgc gagccaaaat tggacgtgtg gatgagtcac ggcgacaaag
      601 tcaccaaatt accaccgcac tttaccatca caggcgttac cccaacctgc ccgattgccg
      661 cgatgtcgga cgaaagccgc cgtttctatg gcgtgcagtt ccaccccgaa gtgacccaca
      721 ccaaacaagg cttggcgttg ctgaaaaact tcgtggtcgg catttgcggc tgtgaaacga
      781 actggacggc agaaaacatc attgaagatg cggtgaaacg cattcgtgag caagtgggcg
      841 atgacgaggt gattttaggt ttgtcgggcg gggtggattc ctccgtcacc gccttgctat
      901 tacatcgtgc tatcggtaaa aacctgcact gcgtatttgt ggataacggc ttgctccgct
      961 tgaacgaagg cgatcaagtc atggaaatgt tcggcaacaa attcggtttg aacattgtgc
     1021 gagtgaatgc cgaagaccgt ttcttagaag cgttaaaagg cttagacgaa ccggaagcta
     1081 aacgcaaaac cattggtaaa gtgtttgtgg acgtgtttga tgacgaaagc aaaaaactta
     1141 gctcggtcaa atggcttgca caaggcacga tctaccctga tgtgattgaa tccgccgcca
     1201 gcaaaaccgg caaagcccac gtgattaaat cacaccataa cgttggcggc ttgccggatt
     1261 atatgaagct cggcttagtc gaaccgttgc gtgaattgtt taaagacgaa gtgcgcaaaa
     1321 tcggcttggc actcggctta ccggctgaaa tgctcaaccg ccacccgttc cccggcccgg
     1381 gcttaggcgt gcgtgtgctg ggcgaaatca aaaaagagta ctgcgattta ctgcgtaaag
     1441 ccgatgcgat cttcatcgaa gaactgcaca aagccggctg gtactacaaa gtcagccaag
     1501 ctttcacggt attcttgccg gtgaaatcgg tgggcgtaat gggcgatgga cgcaaatatg
     1561 actgggtcgt cagcctgcgt gcggtggaaa ccatcgactt tatgaccgct cactgggcgc
     1621 acttgccgta tgatctatta ggcaaaatct ccaaccgcat tattaacgaa gtgaacggta
     1681 tttcccgtgt ggtgtatgac gtgagcggaa aaccaccggc aaccattgag tgggaataac
     1741 tcttacaaaa taggcttctt ataacctaag ttcagtatct aaagctgaaa aatgttgtta
     1801 actgcttaat gtagcggttt agaataaagg attgattcca acggaatcaa tccttaaact
     1861 aagtgccttt tagtaaaact aaatattcaa tttttagttt tatgatttca gtaagccaga
     1921 tgaaccttcg gaataatctc taggttgatc ttcttccgtt ttttctgccg gaataggtaa
     1981 tttggtttgt tggaaaaagg taatattttt tgatgcttct ggtaatagct tttcagagct
     2041 ttgtgctaaa tgggtataaa gctttttata atcagaagct agacttgaaa gtaattgggc
     2101 tgattgctca aagtgttgtt caagtttttg tttttgctca tccacttgag ttttggtttg
     2161 cttcaactct ttttccagtt catgctgttt tctgacacta ctgttaaata ctctaactag
     2221 agtgcaacct attacagcac ctacaataaa tgctgccata atggctgccc aaacatctgt
     2281 tgtccattgt tccatcataa actccttatg ttttagtgat tgattactgc tatttttaac
     2341 atttcagttt ttatttgaaa agctccaaat gattaaaatg tgatataggt tcaattttga
     2401 aagattatca gcaaaaaatg ttagattttt gagtgaaatc tctgta
//
LOCUS       DANLTI010000206         2412 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.211, whole genome shotgun sequence.
ACCESSION   DANLTI010000206 DANLTI010000000
VERSION     DANLTI010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.211"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..131)
                     /locus_tag="PXB09_002627"
     CDS             complement(<1..131)
                     /locus_tag="PXB09_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5234676.1"
                     /translation="MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNT"
     gene            complement(128..694)
                     /locus_tag="PXB09_002628"
     CDS             complement(128..694)
                     /locus_tag="PXB09_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL5234677.1"
                     /translation="MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKH
                     SASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEH
                     QDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISL
                     SNLNVLLHRARLRLQECLSRNWFREESK"
     gene            803..1756
                     /gene="msrP"
                     /locus_tag="PXB09_002629"
     CDS             803..1756
                     /gene="msrP"
                     /locus_tag="PXB09_002629"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDL5234678.1"
                     /translation="MKKLTIQDVTPETIFYQRRKIITALGLGIAASALPKVSMAETQR
                     HLQSLQFKPDPNKGLELTPENKVIGYNNFYEFGVDKSAPAKNAANFKTDPWTLEIGGE
                     VENPFSLNHQQLLNTFPLEERIYRFRCVEAWSMVVPWIGFELARLIEMAKPTSKAKYV
                     VFHTLYDPAQMPGQKNRLLGGGIDYPYVEALRLDEALNSLTLLSVGLYGKTLPPQNGA
                     PIRLVVPWKYGFKSIKSIVKITFAEKRPLTTWESLAPNEYGFYANVNPNVDHPRWSQA
                     SERVIGAGGLLSVKRQPTLMFNGYENEVANLYRGLDLKVNY"
     gene            1756..2340
                     /locus_tag="PXB09_002630"
     CDS             1756..2340
                     /locus_tag="PXB09_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HDL5234679.1"
                     /translation="MLTWLRILIHLGCLLPLVWVAQLLYTGNETILGADPIKELEHFL
                     GYGAIVIFCIMFLLGIALQYLKKNQYQILRRPLGLWAFVWAALHISSYLLLELSLDVK
                     LFFSELAGRPYLILGAAAFFILSIMAITSLPMLKRKLGTRWGTIHQWAYPALVLAMVH
                     YYWSVKSVTFDPIIIGVLVLFIVAHKIQAKFAKK"
BASE COUNT          750 a          467 c          461 g          734 t
ORIGIN      
        1 ttggtatttt tattaaaatt tcggcattta gggcatacca aaagatgcaa ctgcaaacgc
       61 atatgttgtt gcaaacgaag tttctcatca caagactgtg aaataagttc tgttgcttgc
      121 ctgcatttca ttttgattcc tctctaaacc aattgcgaga taaacactct tgtaaacgta
      181 aacgagcacg atgaagtaat acatttaagt tagagagaga aatttcacat tcttggcaaa
      241 tttccgcact actcatctcc aaatgttcac gcatcataaa tactcgtgct tgctgggcgg
      301 gtaatttatt taaacaaata tcaaaaattg cccaaaattc tttttggtaa gttgattgag
      361 ctacccccct ccattcagtt acatcttgat gttccaacca atgatcgtgg cgatcgaaaa
      421 aggcacttgg tgattcttct tcctcacata gagaactgac tggaatatgt cgttttcgtg
      481 ttctgagtaa atctaaaatt ttgttcttta aaatagcaaa aatccaagtt ttaagtgcag
      541 cttctcgccg aaaagaggct gaatgcttat aggcattggt taaggcatcc tgtacaacat
      601 cctcagctaa atctttatcg gctagttgta gggtggcaaa tttaaccatt tgctttctaa
      661 tctcttctat ctgtgtagaa gatagactct tcatatatct cctttaggga atacccaata
      721 aaaaattaca cttattttgt aagaattcta gatcagctga gtccaaaata ataacaacaa
      781 ttcataaaaa aaggatagtt cgatgaaaaa attaacaatt caagatgtta cacccgaaac
      841 tattttctac caacgccgta aaattattac cgcgttaggt ttaggtattg cagcttctgc
      901 attgcctaaa gtaagtatgg cagaaacaca aagacacttg caatcactac agtttaaacc
      961 ggatccaaat aaagggcttg aactcactcc ggaaaacaaa gtaataggct ataacaattt
     1021 ctatgagttt ggcgtggata aaagtgcacc agcaaaaaat gcggcaaact tcaaaaccga
     1081 tccttggaca ttggaaattg gcggagaagt tgaaaatccg tttagcttaa atcatcaaca
     1141 attgcttaat acgtttccac tagaagaacg catttaccgt tttcgctgtg ttgaagcgtg
     1201 gtcaatggtt gtgccgtgga tcggctttga gttagctcgc ttaattgaga tggcaaaacc
     1261 aaccagtaaa gccaaatatg tggtctttca cactttatat gatcctgcac aaatgccggg
     1321 gcaaaaaaat cgcttgctag gcggtgggat tgattatcct tatgtagaag ctttacgctt
     1381 agatgaagcc ttaaattcat taacactact atccgtcggt ttatacggta aaaccctgcc
     1441 accgcaaaac ggtgctccta ttcgcttagt cgtgccttgg aaatatggct ttaaaagtat
     1501 taagtcgatt gtgaaaatca cctttgctga aaaacgccca ctcactactt gggaaagtct
     1561 tgctccaaat gaatatggct tttatgctaa tgtgaatcca aatgttgatc atccacgttg
     1621 gtcgcaagca tctgaacgag taattggtgc aggcgggtta ttatccgtca aacgccaacc
     1681 aacactaatg tttaatggct acgaaaatga agtggcaaat ttataccgtg gcttagattt
     1741 aaaggtgaac tactaatgct aacctggtta cgtatactca ttcatcttgg ctgtttatta
     1801 ccgctagttt gggtagcaca gctattatat acgggtaatg aaacaatatt aggtgccgat
     1861 ccgattaaag agctggagca ttttctcggt tatggtgcaa tcgtcatttt ttgtataatg
     1921 tttctacttg gtattgccct acaataccta aagaaaaacc agtatcaaat tttacgccgt
     1981 ccattgggct tatgggcgtt tgtatgggca gctctacata tttcaagcta tctattgtta
     2041 gaattaagcc ttgatgtaaa attatttttt agcgagcttg ccggtcgccc atatttgatt
     2101 ttaggagcag ctgctttttt cattctaagc ataatggcaa taacttcgct gcctatgcta
     2161 aaacgaaaat taggaacacg ctgggggacg attcaccagt gggcttatcc tgcattagta
     2221 ttggcgatgg tacattatta ttggtcggta aagagcgtaa cattcgatcc aattatcatc
     2281 ggagtcttag tgctgtttat tgttgctcat aaaatacagg ctaaatttgc aaaaaaatag
     2341 caaaatcaca ccgcttgcag cagtcaaact acatacaaaa aataaggggc tgtcctagat
     2401 aacgactaaa ac
//
LOCUS       DANLTI010000207         2407 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.212, whole genome shotgun sequence.
ACCESSION   DANLTI010000207 DANLTI010000000
VERSION     DANLTI010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.212"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            60..>2407
                     /locus_tag="PXB09_002631"
     CDS             60..>2407
                     /locus_tag="PXB09_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234680.1"
                     /translation="MKHTFKLSLLATSIAISLSPTLLASIVRGDVDYQYFRDLAENKG
                     KFFVGATNIPVIDKTGKNIGTFLQVTPTKQVEVESNISPKPNVSLSECFDNESLPGCY
                     EFLYGGGDEDSNDLPVFETVTGETMSIPMIDFSSITRQTGIATLVNPQYVISVNHNQG
                     YRDIQFGDSSSEKADDHHYNYSVVRRNNYMPDPNKERTDLGKGIEKRERNDEGEKLIL
                     DGSGNPTPRWDYHAPRLSKLVTEVAPANEIERTTENVQDFYSVFSDPFIFPMFIRAGS
                     GRQAVVNNERDRLNNGRIEVGNGPFLTGGSVLPVTNGDPSVPGSDFNSRILVAKTENN
                     TINDVFKDHGYGPLTTLGLPGDSGSALFGYDVRTKKWVVLGVYSDYFSENNTLGGDVY
                     KSYWNYHHPHYVRALEKENNAGAINANGARLTWTPSGNTSSIVGGNAPLTVNLADTSL
                     PTLQGHNGNTGDNPWNPQLQHGKTFHILGENNTLSLTENINQGAGAIHFHGNTTVEGM
                     KAGITWLGAGVDIDKDKNVIWKISNPAGDRLSKIGQGTLTINGKGENKGSVSVGDGTV
                     ILNQQADENNKKSAFSELGIVSGRPTVILNSSDQMDPNNIYFGYRGGRLDVNGNDLTF
                     RRIQNSDEGAMVVNHNTAQTANITLTGIVSPTIDQVKVQAITSPDQVSRHLDKDIFTY
                     QRFPHLPTNFIRLKKPLSVAEITAIFNARKVFIDLDFATGLIRENEYFEVLKVTDESA
                     AKQQILAEKIKAAEGTVQGFNGYFGETDPSKTNGRLNITMNS"
BASE COUNT          782 a          468 c          477 g          680 t
ORIGIN      
        1 tctttttaat agcgctcaaa tctgatctac ttacatattt atacaggttt caaataataa
       61 tgaagcatac tttcaagctc tctcttctag caacatcaat tgctatttct ctttcaccaa
      121 cattactggc atctattgta cgtggtgatg tcgattatca atattttcgt gatttagcag
      181 aaaataaagg caaatttttt gttggggcaa ccaatattcc agttattgat aaaacgggca
      241 aaaacatcgg tactttttta caggttacac caactaagca ggttgaagtg gaatcaaata
      301 tttcacctaa gccgaatgta agcctatctg aatgctttga taatgaaagt ttacccggtt
      361 gttatgaatt tctctatggt ggaggtgatg aagactctaa tgatctacct gtttttgaaa
      421 cagtaacagg tgagactatg tctattccaa tgattgactt ctcttccatt actcgtcaaa
      481 cagggattgc aacattagtt aatccacaat acgttattag tgtaaaccac aaccaaggct
      541 atcgggacat tcaatttggt gattcatcta gcgaaaaagc cgacgaccat cattacaatt
      601 atagtgtggt gcgccgtaat aactatatgc ctgatccaaa taaagaaaga acagatctcg
      661 ggaaaggcat agaaaaacgt gaacgtaatg acgaaggaga aaaactgatt ttagatggtt
      721 caggtaaccc aacgccccgc tgggactacc acgcacctag gttatcgaaa ttagtaactg
      781 aagtcgctcc agctaatgag attgaacgca ctaccgaaaa tgtacaagat ttttatagtg
      841 tatttagcga cccttttatt ttccccatgt ttattcgtgc cggttctggt agacaagcag
      901 tggttaacaa cgaaagagat cgcttaaaca acgggcgtat tgaagtcggt aacggtcctt
      961 ttttgacagg aggtagcgtt ctgcctgtta ctaatggcga tccaagcgtt ccaggcagcg
     1021 attttaacag ccgtatttta gtagcaaaaa ctgaaaataa taccataaac gatgtattta
     1081 aagaccacgg ctacggtccc ttaacaactc tcggtttacc tggcgatagt ggctccgctc
     1141 tttttggtta tgatgttcgt accaaaaaat gggttgtgtt aggtgtatat agtgactatt
     1201 tctcagagaa taatacgctt gggggagatg tttataaatc ttactggaac tatcaccacc
     1261 cacattatgt acgtgcttta gaaaaagaaa ataatgcagg cgctattaat gcaaatggtg
     1321 ctagactcac ttggacacct tctggcaata ccagctcaat cgtaggaggg aatgctcctc
     1381 ttacagttaa tttagcagat acttcattac caacacttca aggtcataat ggtaatacag
     1441 gcgataaccc ttggaatcct caactccaac acggtaaaac attccatatt ttgggtgaaa
     1501 acaatacgct aagtctcaca gagaatatca accaaggtgc aggagcaatc cattttcatg
     1561 gtaataccac tgtggaaggt atgaaagcag gcattacttg gttaggagcc ggtgttgata
     1621 ttgataaaga taaaaatgtg atctggaaaa tcagtaaccc tgctggtgac agattatcaa
     1681 aaatcggaca agggacacta actatcaacg gcaaaggaga aaacaaaggc tccgttagcg
     1741 ttggtgacgg cactgttata ttaaatcaac aagcggatga aaataacaaa aaatctgcat
     1801 tttcagagct aggtattgtg agtggcagac ctaccgtaat cctcaattca tcagatcaaa
     1861 tggatcctaa caatatctat tttggttatc gtggtgggcg cttagatgtc aacggcaatg
     1921 atctcacgtt ccgccgtatt cagaatagcg atgaaggagc gatggttgtc aatcataata
     1981 cagcccaaac agcaaacatt acactaaccg gcatagttag tccaacaatt gaccaagtga
     2041 aagttcaagc aattactagt ccagatcagg tttctcgtca tttggacaaa gatattttca
     2101 catatcaacg ttttccacac ttgccaacta attttatccg tttgaaaaaa cctttaagcg
     2161 ttgcagagat cacagctatt tttaatgcgc gtaaagtttt catcgattta gactttgcta
     2221 ctggtctcat tcgtgaaaac gaatactttg aagtactcaa ggtaacagat gaaagtgctg
     2281 caaagcaaca aatacttgct gaaaaaatca aagcagcaga aggcaccgtc caaggtttta
     2341 acggttattt tggtgaaact gatcctagca aaaccaatgg tcgattaaac attacaatga
     2401 acagtaa
//
LOCUS       DANLTI010000208         2395 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.213, whole genome shotgun sequence.
ACCESSION   DANLTI010000208 DANLTI010000000
VERSION     DANLTI010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.213"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            32..751
                     /locus_tag="PXB09_002632"
                     /pseudo
     CDS             32..751
                     /locus_tag="PXB09_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            811..1260
                     /locus_tag="PXB09_002633"
     CDS             811..1260
                     /locus_tag="PXB09_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HDL5234681.1"
                     /translation="MLAKLKWNQLACVTLAFCSASVFSAHHEIKMLDNNAEGSMVFEP
                     GYVKAEVGDTVTFIPSHKGHWVESRSIPEGAEKFLSKEDEEFTITLTHEGVYVYYCPP
                     HRTMNMAGIIQVGQALNLEATQKEVEKIEKRTKENKGRLFEYLEQVK"
     gene            1361..1882
                     /locus_tag="PXB09_002634"
     CDS             1361..1882
                     /locus_tag="PXB09_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HDL5234682.1"
                     /translation="MYKAITLIEILTTITIMVIAVYFISPVIFTLQDRIALHSEIENI
                     QSFIQQIQTKARYTKRNYTLTLSQRNNQWCMIAVIKPINTSKQIICDCLNKHFCDLGK
                     EYHLYTPTHQQIVLKNKSLYPKSFINVDGVSGQLESKCIKLSLNKENEILQFEQLGRV
                     YVAAKNKRSTCKD"
     gene            1914..>2395
                     /locus_tag="PXB09_002635"
     CDS             1914..>2395
                     /locus_tag="PXB09_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234683.1"
                     /translation="MASALGAFLLLLVASSYADFYYTQTKQKEQLYLQAEAHQLLNYF
                     QQHFQHIGYQGSHRTDSNFDLFQQAGKSLNIVHKNCIIGFYDLNQDGCLGKRKTKTAA
                     CKLGTVNNTREVLKEIVGFKVENNEIYTFSSQLDNCVKEQCQTLLENCDGNWSKFTEA
                     "
BASE COUNT          820 a          397 c          477 g          701 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctac ttttaatact cgtaagcccc cttttgataa
       61 ccctaaagtt cgtcaagcat tgaattatgc ggtgaataaa actgaaattt taacttccgt
      121 ttaccaaggc tctgcaacgc cagctaaaaa cccaatgcct tctacgattt ggggatataa
      181 caacgaagta gccggttatg aatttaatcc ggaaaaggcg aagagcttgc ttaaagaggc
      241 cggattagaa aatggctttg aaacagaaat ttgggcaatg cctgtttctc gcccttacaa
      301 tccaaatgcc cgtagaatgg ctgaaatgat tcaagaggat tggaaagcaa taggggtaga
      361 ggcaaagata gtgagctatg aatggggaga atatcttaaa cgaatgggaa acggcgagca
      421 cgctaccgga atgattggtt ggaccggaga taacggcgat ccagataatt tcctcaatgc
      481 cctactcagt tgtaatgcgg tagaacaagg ctcaaactat gcagggtttt gtaatccaga
      541 gtttgaccgt ttaattaatg aggctgcgac tatcagtgat caaaacaagc ggtcagattt
      601 atataaaaaa gcgcaattca tctttaatga gcaagcacct tggttaccga ttgcacattc
      661 aacggtgtat tttccggtaa ggaaagaggt aaaaggctat gttgtcagcc cgtttattgc
      721 tcataatttt tatggtgttg agctggaata acctaaggta taatgaattg aactcatttt
      781 gtgcctcata aatttaggag caataaatat atgttagcga aacttaagtg gaatcaatta
      841 gcttgtgtaa cattggcatt ttgttcagcc tcagtatttt cagcccatca cgaaatcaaa
      901 atgttagata acaatgcgga aggatcaatg gtatttgagc ccggttatgt aaaagcagag
      961 gtgggcgata cggtaacatt tattccgtct cataaagggc attgggttga aagccgctcg
     1021 attccggaag gtgcggagaa gttcttatct aaagaagatg aggaatttac tattaccctt
     1081 actcacgaag gtgtttatgt ttactactgt ccgccacacc gaaccatgaa tatggccgga
     1141 attatccaag taggacaagc tctcaatctt gaagccacac aaaaagaagt ggaaaaaatt
     1201 gaaaaacgca cgaaagaaaa taaaggacgt ttatttgaat atttagagca agttaagtag
     1261 aagtgattta attttgcgat ctgcatcgaa aaatcaatat ttaatagttt acaaatgatg
     1321 cttaaattct aagataccct ctatcaatga gggtattttt atgtataaag ccatcacatt
     1381 aattgaaata ctaaccacta tcactattat ggtgatcgct gtttatttta tctcgccggt
     1441 tatttttaca ctgcaagatc gaattgcact tcatagtgaa attgaaaata tccaatcttt
     1501 tattcagcaa atccaaacta aagcacgtta taccaaacgt aattatacct taaccctttc
     1561 tcagcggaat aatcagtggt gtatgattgc ggtaattaag ccaatcaata ctagcaaaca
     1621 aattatttgt gattgtttga ataaacattt ttgtgattta ggaaaagaat atcatcttta
     1681 tacgccgact catcagcaga ttgtattaaa aaataaaagt ttatatccga aatcctttat
     1741 taatgttgat ggggtaagtg gtcaattaga atcaaaatgt attaagctca gtttaaataa
     1801 agaaaatgaa attttgcaat ttgaacaatt aggacgggtt tatgtggcag caaaaaataa
     1861 acgtagcacc tgcaaagatt agtttatctg cttttagcct aattgaagta ttaatggcta
     1921 gtgcattagg ggcgttttta ttattgcttg ttgcttcaag ttatgccgat ttctattaca
     1981 cacaaaccaa acaaaaagaa cagctctact tgcaagcaga agctcaccag ttactaaact
     2041 acttccaaca gcattttcaa cacattggct atcaaggctc tcacagaaca gacagtaatt
     2101 ttgatttatt tcagcaagca gggaaaagcc tgaatattgt gcataaaaat tgcattattg
     2161 gattttacga tttaaaccaa gatggctgtt tgggaaaacg taagacaaaa acggccgctt
     2221 gtaagttagg aacagtgaat aataccagag aggtgttaaa agaaattgtt ggctttaaag
     2281 tagaaaataa tgaaatttat actttttcat cgcaattaga taattgtgtg aaagaacaat
     2341 gccaaacatt attggaaaat tgcgatggaa attggagtaa atttaccgaa gcaaa
//
LOCUS       DANLTI010000209         2302 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.214, whole genome shotgun sequence.
ACCESSION   DANLTI010000209 DANLTI010000000
VERSION     DANLTI010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.214"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1927
                     /locus_tag="PXB09_002636"
     CDS             <1..1927
                     /locus_tag="PXB09_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL5234684.1"
                     /translation="YIKKLEESIFLKSGKNGDIPHIQCLVRKKDIKLTPEEAVRQLYL
                     MNLHYEYDYPFERMELEYSVVFGREKKRADIVIFDRDNPNAVYIMVELKKPKLKDGKE
                     QLKSYCNATGAPIGVWTNGESISYYNRRDPNYFKDIPDIPNAQQKLSDLLQERWTIQD
                     LIDNDKIAKQRKSLKDLVIEMEDEVLANAGVDVFEELFQLIFTKLYDEMESTRNKSRY
                     LEFRNYGDTESELKAKIQSLFDRAKNKWEGVFAESAKINLSPSHLAICVSSLEEVKLF
                     NSNLDVVDEAFEYLINKSSKGEKGQYFTPRYVIDMCVKMLDPKPEETVIDTAAGSCGF
                     PVHSIFHVWEKQLKARGLERSHLFTAEEKLPEQTDYVKEKVFAIDFDEKAVRVARTLN
                     LIAGDGQTNVLHLNTLDYERWEDFTKEEEWNDVYGEGWKKLRKLRKTKNENRDFQFDV
                     LMANPPFAGDIKETRILARYELGKNSKGKQQSKVGRDILFIERNLDFLKDGGRMAIVL
                     PQGRFNNSSDKYIRDFIAERCRILAVVGLHGNVFKPHTGTKTSVLFVQKWHDELCPKV
                     EDYPIFFATMQKSSKDNSGDKIYVKNADGTLKLDNHQHLIVEHDLFNHDNSTQDGIAE
                     AFIEFAKKEKLSFVGKD"
     gene            2026..>2302
                     /locus_tag="PXB09_002637"
     CDS             2026..>2302
                     /locus_tag="PXB09_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5234685.1"
                     /translation="MDSTFFLKKYLNHPSFNFPLSLNEVSLIKSGTTPTDRDDNLKEG
                     VVLLKTNDIRNNLLNKYSSVDYFISEDINEKMISSQLKEGDVLVNIVG"
BASE COUNT          805 a          354 c          462 g          681 t
ORIGIN      
        1 gtatataaaa aaattagagg aatctatttt cctcaaatca gggaaaaatg gagatattcc
       61 tcatattcaa tgtcttgttc gtaaaaagga tattaagctc acacctgaag aagcagtacg
      121 ccaactctat ttaatgaatt tgcattatga atatgattat ccatttgaac gaatggaatt
      181 agaatattct gttgtattcg ggcgtgagaa gaaacgagcg gatattgtca tctttgatag
      241 agataatcct aacgctgtct atattatggt ggagctgaaa aagccgaaat taaaagatgg
      301 taaagaacaa ttaaaatctt attgtaatgc gactggagca cctattggtg tatggacaaa
      361 tggcgaaagt atttcttact ataatcgccg tgatcctaat tattttaaag atattcccga
      421 tattccgaat gctcaacaaa aactttctga tttattacaa gaacgttgga ctattcaaga
      481 tctgatagat aatgacaaaa ttgccaaaca acgtaaatca ttgaaagatc ttgttattga
      541 aatggaagat gaggtactgg cgaatgctgg agttgatgtt tttgaagagt tatttcaact
      601 tatttttact aaactctatg atgaaatgga aagtacacgc aataaaagtc gttatttaga
      661 gtttcgtaac tatggtgata ccgaaagtga attaaaggca aaaattcaat ctctatttga
      721 tcgtgcaaaa aataaatggg aaggcgtatt tgctgaaagt gccaaaatca acctttcccc
      781 ttcgcatttg gcgatttgtg tatcttcatt ggaagaagta aagctgttta attctaacct
      841 tgatgtagtg gatgaagcat ttgagtactt aattaataaa tccagtaaag gagagaaagg
      901 acaatacttt acgcctcgtt acgtcattga tatgtgcgta aaaatgctcg atccaaaacc
      961 tgaagaaaca gtcattgata ccgcagcagg aagctgtggt tttccagttc attctatttt
     1021 tcacgtttgg gaaaaacaac ttaaagcgag aggattagaa cgctcacact tatttactgc
     1081 tgaagaaaaa ttgcctgaac aaacagatta tgtgaaagaa aaagtctttg cgattgattt
     1141 cgatgaaaag gcagtacgtg ttgctcgtac cctaaactta atcgcaggag atgggcaaac
     1201 caacgtacta catttaaata ccttagatta tgaacgttgg gaagatttta ctaaggaaga
     1261 agaatggaat gatgtatatg gagaaggctg gaaaaaatta agaaaattac gtaaaactaa
     1321 aaatgaaaat cgagatttcc aatttgatgt gctaatggca aatccgcctt ttgccggtga
     1381 tattaaagaa actcgtatat tagctcgcta tgaattaggc aaaaatagca aaggaaaaca
     1441 gcaatccaaa gtcggacgag atattttatt tattgaacgc aatttagatt tcttaaaaga
     1501 cggtggacga atggcgattg tgctaccaca agggcgtttt aacaattcca gcgataaata
     1561 tattcgtgat tttattgcag agcgttgccg cattttagct gttgtgggct tacacggaaa
     1621 tgtgtttaaa ccacataccg gcacaaaaac ttccgtacta tttgtgcaaa aatggcacga
     1681 tgaactttgc ccgaaagtag aggattaccc gattttcttt gccacaatgc agaaatccag
     1741 caaagataat tcaggcgata aaatctatgt taaaaacgct gatggcacac tcaaattaga
     1801 caaccatcaa cacctaattg tggagcacga tctatttaat cacgataata gtacccaaga
     1861 cggcattgca gaagccttta ttgaatttgc taaaaaagaa aagctctctt ttgtgggaaa
     1921 ggattaagcc catttgaccc tgctaaatat caggcattgt tagatgggct agaggtgagc
     1981 gaggtttatt tgagtaaggt tcgttctgca agttattcgg aacgaatgga tagtactttc
     2041 tttttgaaaa aatacttaaa ccatccgagt tttaattttc cattatcgct gaatgaggtt
     2101 tctctgatta aaagtggtac aacaccaaca gatcgagatg ataacttaaa agagggggtt
     2161 gtcttattaa aaaccaatga tattaggaat aatctattaa ataagtactc ttcggtagat
     2221 tattttatta gcgaagatat caatgagaaa atgatttcat cacaactgaa agaaggggat
     2281 gttttagtaa atatcgttgg tg
//
LOCUS       DANLTI010000210         2257 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.215, whole genome shotgun sequence.
ACCESSION   DANLTI010000210 DANLTI010000000
VERSION     DANLTI010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.215"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(242..1375)
                     /locus_tag="PXB09_002638"
     CDS             complement(242..1375)
                     /locus_tag="PXB09_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis PLP-dependent protein"
                     /protein_id="HDL5234686.1"
                     /translation="MTKFNNIETTLVQIGNRTDPRTGAVAMPIILSTAYGRDGLGEST
                     GWDYTRTKNPTRAVLEQGIADLEGGDAGFAMASGMAAIQLVMSLFKAPDEWIISSDVY
                     GGSYRLFDFSHKNHGTLKPVYVNTADLAAIEAAITPNTKAIFVETPSNPLMEECDVAA
                     IAKIAKKHNLMLIVDNTFLTPALFRPIEHGADIVIHSATKYLSGHNDVLAGLIVAKDS
                     DATKVNGQNLTERLFYFQNCAGAVLSPFDSYLAVRGMKTLALRMERHQSNATELAKFL
                     AEQPEIDSVLYSGKSGMLSFRLQKEEWVAKFLKAIKLITFAESLGGAESFITYPATQT
                     HMDIPEAERITRGITNNLLRFSVGLEHVEDIKADLLQAFKQLK"
     gene            complement(1392..2204)
                     /gene="dapB"
                     /locus_tag="PXB09_002639"
     CDS             complement(1392..2204)
                     /gene="dapB"
                     /locus_tag="PXB09_002639"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDL5234687.1"
                     /translation="MTLKIGIVGAGGRMGRQLIQAVHNAQGVELGSAFERKGSSLVGS
                     DAGEVAGVGTLGVVISDDVAQNVAGFDLLIDFTRPEGTLEHLDICVAHHKQMVIGTTG
                     FDDAGKAAIKAASEKIGIVFASNYSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
                     VDAPSGTALSMGEHIAKTLGRDLKTHGVFERNGITGERKRDEIGFATIRAGDVVGEHS
                     VWFADEGERVEIAHKASSRMTFANGAVRAAKWLNGKQNGLFDMTDVLDLNNL"
BASE COUNT          656 a          526 c          392 g          683 t
ORIGIN      
        1 acgaagcgac agcgttagca aaaacttaaa atgatgtacg gatttaaaaa tctgttcgtt
       61 tgcttgtttt ataagcaaac taatttcgca taattattat tatgttaaat agatagttaa
      121 aataacacat ttaattaaat cttttcgtgt ttctctcctc ctttattaaa aaagaaaacg
      181 gtcagattgg taaaatctat acctaatatg accgcttgtg aatacaaaaa aattacttca
      241 attacttcaa ctgtttaaag gcttgcagta aatcagcttt aatatcttca acgtgttcta
      301 aaccaacgga aaaacgcagt aaattattcg taatgcctcg tgtaatacgt tctgcttccg
      361 gaatatccat atgggtttgt gttgcaggat aagtaataaa actttctgca ccgcctaaac
      421 tttccgcaaa ggtaatcaat ttaattgcct tgagaaattt cgctacccac tcttcttttt
      481 gtaaacggaa agataacata ccacttttgc ctgaatataa cacgctgtca atttcaggtt
      541 gctctgctaa gaatttagcc agttcggtgg cattagactg atggcgttcc attcgtaatg
      601 ccaaggtttt cataccacgc acggcaaggt aagaatcaaa tggcgacagc actgcaccgg
      661 cacagttttg gaaatagaat aaacgctcgg tcaaattctg cccgtttact ttggtagcat
      721 cagaatcttt cgcaacaatt aagccggcta acacatcatt atgccccgaa agatacttgg
      781 tcgcactgtg aatcacaata tcagctccgt gctcaatcgg acggaataac gctggggtta
      841 agaacgtatt atcaacgatc aacattaaat tgtgtttttt cgcaatttta gcaatggcag
      901 caacgtcgca ctcctccatc aatggatttg acggcgtttc cacgaaaatc gccttagtat
      961 tcggtgtaat agctgcttca atcgctgcta aatccgctgt attaacataa accggcttta
     1021 atgtgccgtg atttttgtgg ctaaaatcaa acaagcggta agaaccacca taaacatcgc
     1081 tggaaataat ccattcatca ggtgctttaa ataatgacat tactagctga atcgctgcca
     1141 ttccagatgc catcgcaaaa ccggcatcac cgccttctaa atccgcaatc ccctgctcta
     1201 atacagctcg agttgggttt ttggtacggg tgtaatccca gccggtagat tcgcctaagc
     1261 catcacgccc gtaagcagtt gataagataa tcggcattgc caccgcccct gtacgaggat
     1321 cagttctgtt accgatttgc actaatgtgg tttcaatatt attgaatttt gtcattgtta
     1381 ttatccttca attacagatt atttagatcc aatacgtctg tcatatcaaa caagccattt
     1441 tgtttgccat ttaaccattt tgcagcacgc actgcgccat tggcaaacgt cattcgacta
     1501 gaggctttat gtgcgatttc gacacgttcg ccttcatcag cgaaccatac actatgctcc
     1561 cctacaacat caccggcacg aatagtagca aagccgattt catcacgttt gcgttcgcct
     1621 gtaataccgt tacgttcaaa tacgccatga gttttcaagt cacgcccaag agttttggca
     1681 atatgttctc ccattgataa agccgtacct gatggtgcat caactttatg gcgatggtgt
     1741 gcctcaatca cttcaatatc acaataatcg cccattactt ttgctgcttt ttcgagcagt
     1801 ttaaacacca gattcacccc aacgctgtag tttgaggcaa aaacgatacc gattttttca
     1861 ctcgctgctt tgattgcagc tttacctgca tcatcaaaac cggttgtgcc aatcaccatt
     1921 tgtttatgat gagccacaca aatatccaaa tgttctagcg tgccttcagg gcgagtaaaa
     1981 tcaattagta aatcaaaacc tgctacattt tgggcgacat catcagaaat caccacacct
     2041 aatgtaccaa ccccggctac ttcaccagca tcactaccta ctaatgatga acctttacgc
     2101 tcaaaagcag accctaattc tacgccttgt gcattatgga cggcttgaat taattgacgc
     2161 cccattcgcc caccggcacc gacgattcca atttttaatg tcatatttgt tcttcctttt
     2221 tatatttgtt ttttacaagc ggttacattt ttaatta
//
LOCUS       DANLTI010000211         2097 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.216, whole genome shotgun sequence.
ACCESSION   DANLTI010000211 DANLTI010000000
VERSION     DANLTI010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.216"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(72..362)
                     /locus_tag="PXB09_002640"
     CDS             complement(72..362)
                     /locus_tag="PXB09_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234688.1"
                     /translation="MNNLSEFKLRYINNPYSNKDTFFIFDELSILLKSLTSDELKKIG
                     TAKNLADRQLNKQRKRCKRYVSEAYRLVEDNKEPYSKFFNHDGITAYNIKAF"
     gene            complement(412..1176)
                     /locus_tag="PXB09_002641"
     CDS             complement(412..1176)
                     /locus_tag="PXB09_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5234689.1"
                     /translation="MPNITPKLVINALEPAKEKGIGDTLKRAIRLLNEVMNFAVNADV
                     IEFNKCQNVGSNFSVAKSEHNPTIHPKELPQFLAALRDYNLSFQTKMLIKWQLLTMTR
                     SREASETLWSEIDLEAKTWTISAERMKMKRPHVIPLSRQAVEILERMRKITGNSPFVF
                     QSEMKPRQPMNSQTANRAIGLLGYAGTLTAHGMRSIASTYLNEQLVNYDVVEACLAHV
                     IKDQTRKAYNRSDYLDQRVDVMQQWADYVESCSTGI"
     gene            complement(1145..1624)
                     /locus_tag="PXB09_002642"
     CDS             complement(1145..1624)
                     /locus_tag="PXB09_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDL5234690.1"
                     /translation="MARVTTELNNTQIKNAKAQTKDYKLMDGKGLFLLVKKNGSKLWR
                     FRYKKPITGKESDLGIGSYPETTLAQARTIREEYRALLAENIDPLEHRQRLEAEALAE
                     IENTFYKVCLKWRDKCESRVKNGELQALTLKKNWRILEKYLLPCRLLYSKHHAKTSY"
BASE COUNT          583 a          400 c          386 g          728 t
ORIGIN      
        1 gttttgtgat tgtgatcata atacacatta aagaggtttc aggacgatat aaaaaaggct
       61 ctctaaatag attagaaagc cttgatattg tatgcggtta tcccatcgtg gttgaaaaac
      121 ttagagtaag gttctttatt atcttcaaca agacgataag cctctgatac atacctttta
      181 catctttttc tttgcttatt aagttgtcta tctgccagat ttttagctgt tcctattttc
      241 tttaattcat cggaagtcag tgattttaat agtatgctta attcatcaaa tataaaaaat
      301 gtatctttat tagaataagg gttattgata tatcgtaatt taaactcaga aaggttattc
      361 atatttgtac acctctaatt aaacaagcgg tcaaattccg ccaaaaattt actaaatccc
      421 cgttgagcag ctttctacat aatccgccca ttgctgcatt acatctacac gctgatctaa
      481 ataatcagaa cggttataag cctttcgggt ttggtctttg ataacgtgag ctaaacaagc
      541 ctctactaca tcataattga ctaactgctc attcaaatag gttgaggcaa tagaccgcat
      601 accgtgagcc gttagagtgc cggcatagcc taataagcct atggctctgt tggcggtttg
      661 gctgttcatc ggttggcgtg gtttcatttc gctttgaaaa acaaatgggc tattccctgt
      721 gatttttcgc attctttcta aaatttcgac cgcttgccgt gaaagaggga taacgtgagg
      781 gcgtttcatc ttcattcttt cggctgaaat ggtccacgtt ttcgcctcta aatcaatttc
      841 actccacaac gtttcgcttg cctctcgtga gcgtgtcatt gttaatagtt gccatttaat
      901 caacatctta gtttgaaatg ataggttgta atcacgcaat gcagctaaaa attgaggtag
      961 ctcttttggg tgtatcgttg ggttatgttc agatttcgct acgctaaaat ttgagcctac
     1021 attttggcat ttgttaaact cgataacgtc cgcatttacc gcaaaattca tcacttcatt
     1081 aagtagccta attgctcgtt taagggtgtc gcctatgcct ttttctttag caggctctaa
     1141 agcattaata actagttttg gcgtgatgtt tggaatagag tagtcggcaa ggcaaaagat
     1201 acttttcaag gattcgccaa ttcttcttca gcgttaaggc ttgaagttcg ccatttttta
     1261 cacggctttc gcatttatca cgccatttca agcagacttt ataaaaggtg ttttctattt
     1321 cggctaacgc ttcagcctct aatctttggc ggtgttcgag tgggtcgata ttttccgcta
     1381 gtaatgccct atattcttct ctaatcgttc ttgcttgggc tagggtagtt tcggggtaac
     1441 tgcctatgcc taaatcgctc tctttgccgg taatcggctt tttataccta aaccgccata
     1501 acttcgagcc gtttttctta accagcaaaa acagcccctt gccgtccatt agcttgtagt
     1561 ctttggtttg agcctttgcg tttttgattt gagtgttatt taattctgtg gtaactctag
     1621 ccataaaaat ttacctaaaa tcgcattgtg ctttatcaga atcataaggg atttaagggt
     1681 atgggtttca taccctttta cgttataccc tcaaatatac ccttaaaata aggggatgta
     1741 aacgcaagaa cacgaaagaa tacgaatgaa gaaataattt aaaattgctc taaagccagt
     1801 atcatcaatg gttttgcgta agaatgcgaa tgaagaaata agagtggaaa atttaagttg
     1861 gtcccagcct cctctgaact cgcttataac ttattgattt ataaagagat aaaataaact
     1921 ctacaaaaat agggatcatt ttagggatca tttacataaa agctatttat tttcgtttat
     1981 aaaatgttca tttgtgcggc taggttggtt tgtctttcct agttgcattt ctattctatt
     2041 atcagcaact attcagccct tcagcaagat ttcatttttc atacatcagc ataaaaa
//
LOCUS       DANLTI010000212         2024 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.217, whole genome shotgun sequence.
ACCESSION   DANLTI010000212 DANLTI010000000
VERSION     DANLTI010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.217"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..729
                     /locus_tag="PXB09_002643"
     CDS             <1..729
                     /locus_tag="PXB09_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5234691.1"
                     /translation="ELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKANY
                     FEISDLDYIKAEAQGELVAVVHSHPEPNGKPVLSTLDRKMQVQTGLDWWLVHNQKIHK
                     FRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHTGQNLYLDNIQGQ
                     GFERVETPQIGDVILMQVGADVPNHAAIYIGDQMVVHHSPNRLSKRDLYDGYWLRHTH
                     SIWRHKLAEKLDFDGILNDIAVNN"
     gene            998..1627
                     /locus_tag="PXB09_002644"
     CDS             998..1627
                     /locus_tag="PXB09_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5234692.1"
                     /translation="MITVKFYGHLKTFGTDFKILVKDIAEAIRALCSQLKGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVVKGAKSGGIFQAVLGVALIGAA
                     FALGPIGLGLVGSATAMTVGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            1637..>2024
                     /locus_tag="PXB09_002645"
     CDS             1637..>2024
                     /locus_tag="PXB09_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234693.1"
                     /translation="MRIYGAKGGGGSSHTPIEAPETGRSKQIVNIVELLCEGEIEGLV
                     DGFKSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQDVLDGYDSSQNEVNVGVEIKKK
                     NGAIVRTVTDERINRLRLTLGVRSLFH"
BASE COUNT          619 a          399 c          480 g          526 t
ORIGIN      
        1 gaattggaac aacaaataat cgactacgcc ctccaacacg aaccgcacga aatgtgcggc
       61 tttgttgttt ttgacggcaa taaaaatcga tttatccctt gcgaaaacca agcggaagac
      121 aaagccaatt actttgaaat ctctgatctt gattacatca aagcagaagc acaaggcgag
      181 ctggtggcgg tagttcattc acaccctgag ccaaacggca agccggtact ctctaccctt
      241 gatcgcaaaa tgcaagtaca gaccggttta gattggtggc tggtacataa tcaaaaaatc
      301 cataaattca ggaatgtgcc gcatttaatc gggcgtgagt ttaaacacgg tacaatggat
      361 tgttacacgc tctaccgtga tgcctatatg cttgccggtt acgagatgga cgagttcgag
      421 cgacaagatg actggtggca taccgggcaa aatctctatt tggataatat tcaagggcaa
      481 ggctttgagc gagtggaaac cccacaaatc ggcgatgtga ttttaatgca agtaggtgct
      541 gatgtgccga accacgctgc catttacatt ggcgatcaga tggtagtcca tcatagcccc
      601 aaccgattat ctaagcgtga tttatacgac ggctactggt tacgccatac ccacagtatt
      661 tggcggcata aactggcgga gaagttagat tttgatggca tattgaatga tattgctgta
      721 aataactaac aaaaaatgac cgcttgtaac aaaaacaaac cccgaagcgt ttgcagcact
      781 tcggggtttt tcatatccac ttacctaact aagaggacat aaattaaatg aatgataaac
      841 gatttacatt caaatttcta ggagttctta tggaagcaat aaatattacc ccaaaagaaa
      901 tcagaaaaac aatgtggaca gccgcaataa ttctcttttt gtttgcgttc atctggaaag
      961 cccctgaatt tatcactgct attcgttggt ggtaactatg attacagtta aattttacgg
     1021 acaccttaaa acattcggca cagattttaa aattttagtt aaagacatcg ctgaggcaat
     1081 tcgtgctctg tgttcacagc ttaaaggatt gcgtgaagcg ttgcgagacg gtgtttataa
     1141 agtccgtatc ggtaagcagt atttagaccc atcagccctt gaaaaagggc ttttttattg
     1201 cctgaagaaa gggcaaacca ttcattttac ccctgttgtc aaaggagcga aaagcggtgg
     1261 tatttttcaa gcggtgttag gtgtggcgtt aattggggct gcatttgcgt taggtcctat
     1321 cggcttagga ttggttggct ctgctacagc aatgacagtt ggagcaatgg gggcatcaat
     1381 gttactagga ggagtttccc aaatgctcac caaaatgcca aaagccccca caatgggtaa
     1441 tgaaacagaa aaagaaagct caacggcttt ttcaaattta aataacttgg tggctcaagg
     1501 caaacctgtg ccgttggctt atggtttgat tcgtaccggc tcgctggtga tatcgcaggg
     1561 agttgagacg atcaccatta aagaaaacca accggcaagc aacaagaaaa ccggctttag
     1621 aaaataaggg ataattatgc gtatttacgg agcaaaaggt ggtggcggca gtagccatac
     1681 cccgattgaa gcaccggaaa ccggtcgctc aaaacagatt gtgaatattg tggaattgct
     1741 gtgcgagggc gaaattgaag gcttggttga tggctttaaa tcgatttacc tagacggcac
     1801 gcagatccaa aacgatgacg gcacctataa ttttaataat gtgagcggtc agctaaatgt
     1861 cggtacgcaa gatcaagatg tgttggacgg ttacgatagc tcacagaatg aagtgaatgt
     1921 gggtgttgag attaagaaaa agaatggggc tattgtccgc accgtaactg atgaacgaat
     1981 taaccgcttg cgtttaacgt tgggagtaag gtcattattc cacc
//
LOCUS       DANLTI010000213         1936 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.218, whole genome shotgun sequence.
ACCESSION   DANLTI010000213 DANLTI010000000
VERSION     DANLTI010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.218"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1642
                     /locus_tag="PXB09_002646"
     CDS             <1..1642
                     /locus_tag="PXB09_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDL5234694.1"
                     /translation="DLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHIVLGFIFL
                     KYISDSFTDFQAKLKTQLTTPESELYLDPALFDEQEFSQILAEELEQRDYYAAENIFW
                     VPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAG
                     FGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGG
                     QYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQES
                     NSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESL
                     ANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIV
                     QADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFT
                     ADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGV
                     PFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI"
     gene            1632..>1936
                     /locus_tag="PXB09_002647"
     CDS             1632..>1936
                     /locus_tag="PXB09_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5234695.1"
                     /translation="MAFNQYVFSDIVELISEKIKIKDLKKENYISTDNMLPNFGGITL
                     AENLPNSASCNRFAKKDILFSNIRTYFKKVWLAEFSGGCSPDVLVMRSKNTDILLNE"
BASE COUNT          592 a          478 c          402 g          464 t
ORIGIN      
        1 tgatctcaac gctgacacaa gtcaagcctt tttaaacgaa ctcgaccaaa ccctctggac
       61 tgccgccgac aaactgcgta aaaacctcga tgccgccaac tacaaacaca tcgttcttgg
      121 ctttatcttc ctaaaataca tctccgacag ctttaccgat ttccaagcca agctaaaaac
      181 ccagcttacc acccccgaaa gcgaactcta tcttgaccct gcactatttg acgaacaaga
      241 atttagccaa attcttgccg aagagttgga acagagagat tactacgccg ctgaaaacat
      301 cttttgggtg ccggagcaag cccgctggga caacatcaaa tcattaagca aactcaatct
      361 tggcgatgaa ttgccttggg gagacaaatt taaaggtgtc agccgcttga ttgatgatgc
      421 ctttgaagcc atcgaacggg aaaaccccaa actcaaaggc gtactccaac gcattgccgg
      481 ctttggcgtg cctgatgaaa tgctcacagg cttaattgac ctgttctcac gcaccaattt
      541 cacccagcct atgcacaatg gcgaacctgt gcatctgcaa gccaaagaca ttttagggca
      601 cgtctatgaa tactttcttg ggcaatttgc ccttgccgaa ggcaaaaaag gcggtcaata
      661 cttcacgcca aaatccatcg ttaccctgat tgttgaaatg ctcgaaccct attcagggcg
      721 gatttacgac ccagctatgg gcagcggcgg cttttttgtg caagctgacc gctttattca
      781 ggctcacgca ggcaaccgca acgccatttc cgtttatggg caagaatcca actccaccac
      841 tcgcaaactg gcggtgatga atatggcgat tcgtggtatt ccctttgact ttggcgacaa
      901 gcccgaagat accctactaa accctttgca catcgacaaa aaaatggatg ttgtgatggc
      961 aaatccgccc tttaaccaaa aagagtggtg gaatgaaagc ctagcaaacg atccacgctg
     1021 ggcatacggc acaccgccgc aaggcaacgc caactttgcg tggttgcaac atatgattta
     1081 ccacctctcc cccaaaggca aaatggcact cctgctcgcc aacggctcaa tgagcagcca
     1141 aacttcaggc gaaggcgaca ttcgcaaaaa catcgtgcaa gctgaccttg tcgaagcgat
     1201 gattgccctg cccaatcagc tattcaccaa cacccaaatc cctgcctgca tttggattat
     1261 caataaagcc aaagccagaa aaggtgaagt gctgtttatc aacgccaccc aaataggcta
     1321 cctgaaggac cgcgtcttgc gtgattttac cgctgatgac atcgccaaaa tcagcgacac
     1381 ctaccacaac tggcaaaaac agaacggcta cgaaaatatc cctgcgtttt gttattgtgc
     1441 cacgctggac gaaatcgcca aaaacgattt tgtgctgacc gcagggcgat atgtcggtgc
     1501 ggtacaagaa gaaaatgacg gcgtgccgtt tgcagaaaaa atgcaggaat tgaccgcttt
     1561 attgaatgaa caatttaaac aagggcggga attggaacag caaatcgcag agaatttaaa
     1621 ggggttggga tatggcattt aatcagtatg tattttcaga tattgttgaa ttaatatccg
     1681 aaaaaataaa aatcaaagac ttaaaaaaag aaaactatat ttcgacagat aatatgctgc
     1741 ctaattttgg tggaataaca cttgctgaaa accttccaaa ttcagcttct tgcaataggt
     1801 ttgccaaaaa agacattttg ttttccaata taagaaccta ctttaaaaaa gtttggcttg
     1861 ctgaattttc aggtggttgt tctcctgatg ttctggtaat gcgcagtaaa aacacagata
     1921 ttttattaaa tgagta
//
LOCUS       DANLTI010000214         1905 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.219, whole genome shotgun sequence.
ACCESSION   DANLTI010000214 DANLTI010000000
VERSION     DANLTI010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.219"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            286..1818
                     /locus_tag="PXB09_002648"
     CDS             286..1818
                     /locus_tag="PXB09_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDL5234696.1"
                     /translation="MNLVDYSTSLWSVLPALIALILAIVTRKVIISLSIGILFGAFML
                     TNSNFLDALTYIKNSVVSLVYKGAEEGLNSNNVNIILFLLLLGVLTSLLSISGSNQAF
                     ANWAQKKVKGKRGAKLMAAGLVFFTFIDDYFHSLAVGAIARPVTDKFRVSRAKLAYIL
                     DSTAAPMCVLMPISSWGAYIITLIAGLLATHSITGYSPLGAFMTMSAMNFYAIFAMIM
                     VFFVAYFSFDIGSMARFERQAAHLAELDDEQIETKGHVRDLILPIIALIVATVSMMMK
                     TGADALAESGASFSILGAFENTTVGISLVVGGVAGLIVATICIITSGNISFKNYVRAY
                     GLGVKMMSGAITILFFAWTINGVVSDMQTGKYLSGLVAESIGAEFLPAILFVLAAAMA
                     FSTGTSWGTFGIMLPIGASMAVHSDPALIIPCLSAVMAGAVCGDHCSPVSDTTILSST
                     GAQCNHMDHVISQLPYALLVATASIIGYLVVGFTQSAVLGFIATAVVMAILILLFKEK
                     KH"
BASE COUNT          510 a          308 c          418 g          669 t
ORIGIN      
        1 tgtagaggtg cgaattcaat aagtatttct tctgagtgga aaacgatgaa ggggaaggaa
       61 aggtgaattt gccgaaatca attaagcgtc atcttaattg gttggggtcg ttgtcgaaag
      121 aaacgacact gtcgtagtaa atgctacgga gtgctactgt tagggtgggt ttcagatatt
      181 tcacatttgc cttcctttca tatttatttt tataaatatc ccagtagatc tcttgtttgg
      241 ctattcttat ttatacaaat tatacacagt cattttagag gttttatgaa tctagttgat
      301 tattctacgt cactttggtc ggtattgccg gcactgattg cgctaatatt ggcaattgtg
      361 acacgcaagg tgattatttc acttagcatc ggtattctct ttggtgcatt tatgcttact
      421 aatagcaatt ttcttgatgc acttacttat attaaaaata gcgttgtttc tttagtttat
      481 aaaggggctg aagaaggatt aaattcaaat aatgttaaca ttattttatt tttgctttta
      541 ttaggggtat taacgtcatt attaagtatt tcaggtagta atcaggcgtt tgcgaattgg
      601 gcgcagaaaa aggtaaaagg caaacgaggc gcaaaattaa tggcggcagg tttggttttc
      661 tttaccttta ttgatgacta tttccacagt ttagcagtag gtgcgattgc ccgccctgtt
      721 acggataaat tccgtgtttc tcgtgctaaa ttagcttata ttttagattc taccgccgct
      781 ccaatgtgcg tgttaatgcc aatttcaagc tggggggctt atattattac cttaatagct
      841 ggcttattgg ctacgcattc catcacaggc tattcgccac taggcgcatt tatgacaatg
      901 agcgcaatga acttttacgc catttttgcg atgattatgg tgttctttgt ggcatatttc
      961 tcatttgata ttggttcgat ggcgcgtttt gaacgtcaag cagcgcattt agcagaatta
     1021 gatgatgagc aaattgaaac gaaaggacac gtgcgcgatt tgattttgcc aattattgca
     1081 cttattgttg ctacagtctc aatgatgatg aaaacaggtg cagatgcact ggccgaatca
     1141 ggtgcttcat tttctatact aggtgctttt gaaaatacta cggtaggcat ttcattagtt
     1201 gttggtggtg tggcagggct tatagttgca actatttgta tcattacaag cggtaatatt
     1261 tcttttaaaa attacgtccg tgcttatggc ttaggtgtga agatgatgtc tggtgcaatc
     1321 actattctct tctttgcgtg gacaataaac ggcgtagtaa gtgatatgca aacagggaaa
     1381 tatctatcag gattggttgc agaaagcatt ggagcagagt ttttacctgc aattctattt
     1441 gtgttagccg cagcaatggc gttttcaaca ggaactagct ggggaacatt tggtattatg
     1501 ttgccaattg gagcctcaat ggcagtgcat tcagatccag cattaattat tccttgttta
     1561 tctgcagtaa tggctggtgc ggtttgtggt gatcactgtt ctccagtatc tgataccact
     1621 attctttctt caacaggcgc acaatgtaat catatggatc atgtcatttc tcaattacct
     1681 tatgctttat tagttgcaac agcttctatt attggttact tagtggttgg ctttacccaa
     1741 tcagcggtat tgggatttat tgctacagct gttgttatgg caatactcat tttgcttttt
     1801 aaagaaaaaa agcattaatt tccgaaaatg tgaagggaat cacagaatga gatttattga
     1861 tgagataaaa tagcactcaa gatatggata tcgaatgttg tgtta
//
LOCUS       DANLTI010000215         1873 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.220, whole genome shotgun sequence.
ACCESSION   DANLTI010000215 DANLTI010000000
VERSION     DANLTI010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.220"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            38..478
                     /gene="nudB"
                     /locus_tag="PXB09_002649"
     CDS             38..478
                     /gene="nudB"
                     /locus_tag="PXB09_002649"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDL5234697.1"
                     /translation="MNYKNPHSILVVIYAKNTQRVLMLQRKDDPDFWQSVTGSINIGE
                     TPLEAAEREVSEETGLQTFEQKQPLVDCQKQIEFEIFPHFRYKYAPNITHCVEHWFLL
                     PLDSEQEPILTEHLAYRWVSVEDAVRLTKSPNNAQAIQEYLTSK"
     gene            491..1231
                     /locus_tag="PXB09_002650"
     CDS             491..1231
                     /locus_tag="PXB09_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5234698.1"
                     /translation="MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDTS
                     SNPRLRAAVDKALSSNMTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECL
                     SDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILVANADEDALTEAAIEAGAD
                     DIQPQEDGSFEIYTAWEDLGSVKDGIEAAGFKIENAEVTMIPSTTVELDAETAPKLLD
                     LINRLEDCDDVQNVYHNGEISDEVAALL"
     gene            1361..>1873
                     /locus_tag="PXB09_002651"
     CDS             1361..>1873
                     /locus_tag="PXB09_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234699.1"
                     /translation="MKLVKFVPALAATLVLAACSNANTQSAPQQAQDAVTKVAEQATQ
                     QVNEIAGNAPRASGAVKVEKATDGAKSIVYRCQSGKRVTANYVFQGEEAKAVNLLVQS
                     GGKTQKIPTLTRDASNQDSTSFKTDKYSWDLDTGFTLSSNGQSGMLTKYGAKTDTIVA
                     KLCDVDKALTS"
BASE COUNT          621 a          360 c          396 g          496 t
ORIGIN      
        1 tacctaaaaa aattaaattt cacatcttag taataaaatg aactataaaa atcctcatag
       61 tatccttgtg gtgatttatg ctaaaaatac ccaacgagta ttgatgctac aacgcaagga
      121 cgatcctgat ttttggcaat cggtgaccgg ttcgatcaat attggagaaa caccgctgga
      181 agcagcagaa cgggaagtga gcgaagaaac cggtttgcaa acttttgagc aaaaacaacc
      241 gcttgttgat tgccaaaagc agatagaatt tgaaattttc ccgcattttc ggtataaata
      301 cgcacctaat atcacacatt gtgtcgaaca ttggtttttg ctgccacttg atagtgagca
      361 agagcctatt ttaaccgaac atttggcata tcgttgggtt tcagtggaag atgcggttcg
      421 actgactaaa tctcccaaca atgcccaagc aatacaagaa tatttaacat caaaataagg
      481 aaacaacaga atggcaggcc atagtaagtg ggcaaatatt aaacaccgta aagcggcaca
      541 agatgcacaa cgcggtaaaa tttttactaa attaattcgt gaattggtga ctgccgccaa
      601 actcggcggt ggtgatacct cttccaaccc tcgtttgcgt gcggcggtgg ataaagcgtt
      661 atccagcaat atgacccgtg ataccatcaa ccgtgcaatc gagcgtggtg taggcggtgg
      721 cgatgatacc aatatggaaa ccaaaatcta cgaaggttac ggcccgggtg gtacagcagt
      781 gatggtggaa tgtttaagtg ataacgctaa ccgtacgatt tcccaagttc gtccaagttt
      841 cacaaaatgt ggcggtaacc taggtactga gggttcggta ggttatttat ttagcaaaaa
      901 aggcttaatt ttagtggcaa atgccgatga agatgcctta actgaagctg ctattgaggc
      961 cggtgcggac gatattcaac cacaagaaga tggtagcttt gaaatttata ccgcttggga
     1021 agatttaggc tcagtgaaag acggcattga ggctgcaggc tttaaaattg agaatgcaga
     1081 agtaacaatg attccatcaa ctaccgttga acttgacgca gaaactgcac caaaacttct
     1141 tgatttaatc aaccgccttg aagattgtga tgatgtacaa aacgtttatc acaatggtga
     1201 aatcagtgac gaagtcgctg cattactgta ataaaaaaat cacgcaaaat aagcataatt
     1261 taggttatgc ttatttttta tgaacttttt tcctatatta ctgactaacc taatgtagtt
     1321 tatatgctac tactttacta taacatttta aggagagtct atgaaattag tgaaatttgt
     1381 ccctgcccta gcagcaactt tagtattagc cgcttgctct aatgcaaaca cacaatctgc
     1441 tcctcagcaa gctcaggacg ctgtgactaa agtggctgaa caagcaacac agcaagtgaa
     1501 tgaaattgca ggtaatgcac ctcgtgcaag tggtgcagta aaagtagaaa aagcaactga
     1561 tggtgcaaaa tcaattgtat atcgttgcca aagtggtaaa cgtgtaactg cgaattatgt
     1621 cttccaagga gaagaggcaa aagcagtaaa tctattagtc caaagcggcg gtaaaacaca
     1681 aaagatccca acattaactc gtgatgcctc aaaccaagat tctacttcat tcaaaacgga
     1741 taaatattct tgggatttag acacaggctt taccttatca tctaatggcc agtcaggtat
     1801 gctaaccaag tatggtgcta aaacagatac catcgttgct aaattatgtg atgtagataa
     1861 agcattaacc tca
//
LOCUS       DANLTI010000216         1711 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.221, whole genome shotgun sequence.
ACCESSION   DANLTI010000216 DANLTI010000000
VERSION     DANLTI010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.221"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>1711
                     /locus_tag="PXB09_002652"
     rRNA            <1..>1711
                     /locus_tag="PXB09_002652"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          511 a          331 c          509 g          360 t
ORIGIN      
        1 aagcttggat gagtcgataa gaggcgttta atccaagatg tccgaatggg gaaacccagt
       61 aggtgaagaa cctactatca cccagtgaat acatagctgt gtgaggcaaa ccgggagaac
      121 tgaaacatct aagtaccccg aggaaaagaa atcaaccgag atttcgttag tagcggcgag
      181 cgaacgcgaa agagccagtt agtgatagca gtaaagttag gggaatgttc tgggaaggac
      241 aatcgtagag ggtgataatc ccgtacctta aaactccatt gtggtactag gctaacaaca
      301 agtagggcgg gacacgtgat atcctgtttg aagatggggg gaccatcctc caaggctaaa
      361 tactcctgat tgaccgatag tgaaccagta ctgtgaagga aaggtgaaaa gaaccccggc
      421 gaggggagtg aaatagaacc tgaaaccttg tgcgtacaag cagtgggagc aagagtaatc
      481 ttgtgactgc gtaccttttg tataatgggt cagcgactta tattttgtag caaggttaac
      541 tgaataaggg agccgtaggg aaaccgagtc ttaactgggc gtgtagttgc aaggtataga
      601 cccgaaaccc ggtgatctag ccatgggcag gttgaaggtt gggtaacact aactggagga
      661 ccgaaccgac taatgttgaa aaattagcgg atgacttgtg gctgggggtg aaaggccaat
      721 caaaccggga gatagctggt tctccccgaa atctatttag gtagagcctt gagcggacac
      781 cttcgggggt agagcactgt ttcggctagg ggtccatccc ggattaccaa cccgatgcaa
      841 actgcgaata ccgaagagtg atactcagga gacacacggt gggtgctaac gtccatcgtg
      901 gagagggaaa caacccagac cgccagctaa ggtcccaaag tctatattaa gtgggaaacg
      961 aagtgggaag gcttagacag ctaggatgtt ggcttagaag cagccaccat ttaaagaaag
     1021 cgtaatagct cactagtcga gtcggcctgc gcggaagatg taacggggct caaatatagc
     1081 accgaagctg cggcatcaga cgaaagtctg ttgggtaggg gagcgttgtg taagtcgatg
     1141 aaggtggatt gagaagtctg ctggagatat cacaagtgcg aatgctgaca taagtaacga
     1201 taaaacgagt gaaaaactcg ttcgccggaa gaccaagggt tcctgtccaa cgttaatcgg
     1261 ggcagggtga gtcggcccct aaggcgaggc tgaaaagcgt agtcgatggg aaacgggtta
     1321 atattcccgt acttgtaata actgcgatgt ggggacggag aaggttaggt tagcagactg
     1381 ttggatgtct gtttaagccg gtaggtggga agattaggca aatccggtct tccttaacac
     1441 cgagaagtga tgacgagtct ctacggagat gaagtaatcg ataccacgct tccaggaaaa
     1501 gccactaagc ttcaggttat tataaaccgt actataaacc gacacaggtg gtcaggtaga
     1561 gaatactcag gcgcttgaga gaactcgggt gaaggaacta ggcaaaatag caccgtaact
     1621 tcgggagaag gtgcgccggc gtagattgta gtcccttgcg gatgaaggtt gaaccggtcg
     1681 aagataccag ctggctgcaa ctgtttatta a
//
LOCUS       DANLTI010000217         1710 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.222, whole genome shotgun sequence.
ACCESSION   DANLTI010000217 DANLTI010000000
VERSION     DANLTI010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.222"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            219..1679
                     /gene="xseA"
                     /locus_tag="PXB09_002653"
     CDS             219..1679
                     /gene="xseA"
                     /locus_tag="PXB09_002653"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDL5234700.1"
                     /translation="MSNILTVTQLNYSVRHLLEMEMSHIWLTGEISNFSQPVSGHWYL
                     TLKDDKAQVRCAMFKMKNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGE
                     GLLQQQFEQLKAKLSAQGLFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDP
                     SLSVVIYPALVQGKEATQDIVNMIELANRRNECDVLIVGRGGGSLEDLWCFNEESVAY
                     AIYHSQIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKV
                     NLAFDRVWNHKFNRFQQLPLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQ
                     VGKELNVRLIHQHPQKQIERQSQMLKQLELKLHWQMEQQLSKKQQKWKNITQRFERNP
                     LPYQLYQQQTMVAKMSQRLAYSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQ
                     TKDGKTLTSTENIERGEAIITQLKTGKIISQVVDFL"
BASE COUNT          541 a          371 c          351 g          447 t
ORIGIN      
        1 gagcagcttg gtagctcgtc gggctcataa cccgaaggtc gctggttcaa atccggcccc
       61 cgcaaccaca ttccaaaccc tcgatagtga atcacatcga gggttttcgt tttatttgcc
      121 aaaaaacagc aaaaaataac cgcttgttga ctgcaaaagc ttcctctcgc tttcatttct
      181 cgttacactt ctactacatt tacgcttttt tgattattat gagcaatatt ttaactgtta
      241 cccaactcaa ctattccgtc cgccatttgc tcgaaatgga aatgagccat atttggctaa
      301 ccggcgaaat ctcaaatttc agccaaccag tttcggggca ttggtatctc actttaaaag
      361 atgacaaagc acaagtgcgt tgtgcgatgt ttaaaatgaa aaatgtaaga gtgaattttc
      421 gcccacaaaa cggtatgcag gtgctggtgc gggcaagtgt tacactctat gagccacgag
      481 gtgactatca gctcattatt gagagtatgc aaccggcggg cgaaggcttg ttacagcagc
      541 aatttgagca acttaaagca aaactttcag ctcaaggctt gtttgctcaa gagcataaaa
      601 agccaattcc tacttttgtt aaaaccgttg gtattattac ctcctcaagc ggagccgcat
      661 tacaagatat tttacatatt ttgcaacgac gagatccgag cttatcagtg gttatttacc
      721 cggctctcgt gcaaggcaaa gaagcaacgc aagatattgt gaatatgatt gaactggcaa
      781 accgccgcaa tgagtgtgat gtattaattg tcgggcgagg tggcggttca ttagaggatt
      841 tatggtgttt caacgaagag agtgtcgctt atgccattta tcattcacaa atcccgatta
      901 tcagtgcggt gggacacgaa accgatgtga ccattgctga ttttgttgca gatttgcgcg
      961 caccaacgcc ttcggctgct gcggaattag tcagcagaga tcaaaatgaa ttgaaacgcc
     1021 aattacaaca tcagtttgat aaagtgaatt tagcctttga ccgagtttgg aaccataaat
     1081 ttaaccgttt ccaacaactc cccttacgcc tgaatgctca gcatccaagc aaacaaattc
     1141 aatcgcaaca gcaacgtttt gattatatgg aataccgcct cgagcaggca atttatgcac
     1201 ttgttgcagc caaaaagcag gtggggaaag agctaaatgt ccgtttaatt caccaacatc
     1261 cgcaaaagca gattgaacgc caatcccaaa tgcttaagca attggagctg aaactccatt
     1321 ggcaaatgga gcagcaactc agcaaaaaac agcaaaaatg gaaaaacatt acgcaacggt
     1381 ttgaacgcaa cccgctacct tatcaacttt atcagcaaca aacgatggtg gcaaaaatgt
     1441 cgcaacgctt ggcttattct atcgaaaaaa taatgctgaa agagcagcga cattttcaag
     1501 agttatgcac taaacttgat ggacttagcc cattgaaaat cttgaccaga ggctactcaa
     1561 ttacccaaac taaagacggt aaaacgctta cttcaacaga aaatattgaa cgtggtgagg
     1621 ctattatcac ccaactaaaa acaggaaaaa taataagtca agtagtggat tttttgtagg
     1681 ggaaattttg aacgctgcca atttttaaaa
//
LOCUS       DANLTI010000218         1595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.224, whole genome shotgun sequence.
ACCESSION   DANLTI010000218 DANLTI010000000
VERSION     DANLTI010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.224"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..376
                     /locus_tag="PXB09_002654"
     CDS             <1..376
                     /locus_tag="PXB09_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234701.1"
                     /translation="FIDFGKQLAKPVKFIKQRTAFLPKPLQQAVVFAVIFAGLPLFLV
                     GFTVLRILNGTPVEDISTNDVAYNPNHVENTVNEIEDDSEDSKPEDLWDVIADQDENQ
                     LDGYRDGYFGYGLYQGGYFVKR"
     gene            complement(429..>1595)
                     /locus_tag="PXB09_002655"
     CDS             complement(429..>1595)
                     /locus_tag="PXB09_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5234702.1"
                     /translation="QMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILLT
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADVK
                     QNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYGGNLDPTFANATTRLT
                     SSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTFV
                     SFALVSLTFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFLV
                     LPAIWLGSMSWAGVKIGDIAAGFTTDSLDSKSAGSQGGNLVKKGGKEISAGFNK"
BASE COUNT          495 a          336 c          306 g          458 t
ORIGIN      
        1 atttatcgat ttcggaaagc agctcgctaa gccggttaaa tttatcaaac aacgtaccgc
       61 atttttacca aaaccgctac aacaagctgt cgtttttgcg gtgatttttg caggacttcc
      121 cttgttttta gttggattca cggttctgcg aattctcaat ggaacaccag tagaagatat
      181 ttcaacaaat gacgtagcat ataatccaaa ccacgtcgaa aacacggtta atgaaattga
      241 agatgatagt gaggatagta agccggaaga tttatgggat gtaattgctg atcaagacga
      301 aaatcagctt gatggatatc gtgatggata ttttggatat ggactctatc agggtggcta
      361 ttttgtaaaa agatgagaaa atatgattag aaattaataa ggtagagatt aacctctacc
      421 ttattgtttt atttgttaaa ccctgcagat atttccttac cgcctttctt aactaaatta
      481 ccaccttgag agcctgcgga tttactatct aatgaatcag tagtaaaacc ggcagctata
      541 tctcctattt ttactccagc ccacgacata ctgcctagcc aaatcgccgg taaaaccaag
      601 aacatcgaac ccatcacaaa attgacgata aaatcatctt gcgtattttc aaggaaatac
      661 ggatttattc gactatgtgc actggaatca tatagagcgg atagtagcca agaatctaac
      721 catcttgcta attcccacca gaatgtcagt gataccaaag caaaactcac aaaagttaat
      781 gtaactaatg ttttgagaga ataaccactc atcacaataa ccagcggagt aatgatgatc
      841 acagccatca acataaaagc atgtaccatc ggcagtgctt gtcgcattgc atcgaatgct
      901 ggaaaggctg caaagctggc agctaagctt cccactgaag atgttaatcg agtcgttgca
      961 tttgcaaatg taggatctaa attcccccca tacccgggat aaactttccc tctcgaaata
     1021 tccatattct ctgctcgtaa tacagtacgg agtatggatt catccgcatt ttctttgctg
     1081 ctaaaaaaat caatcacttt tgcagagaag ttctgtttga catcagctaa taaacgatct
     1141 tttaaaccag tattcgccgt atcccaccac tctgcacaat ttggaaaacc accttcccca
     1201 ttattcggca atccattatc ccgggaagca ttgtagggaa atagactatg aggttgttga
     1261 gctcgataac ggggataaag ctcactgttt gtcaaaagaa tacgaccacc taaccagctg
     1321 gtttcacgca cctgtgccgg agtcaatgag agctgactgc tttgaatttt ctgacgtgca
     1381 ggtacataac attgttgtac aaataagcga acctcagtca ataatgcagg attattgatt
     1441 ttttcatgtt ggacctcaaa gcgaacttga cgtaaatccg gtttacacgg aattgaagct
     1501 gttaatgcgt gtgtaactcc tttgttgatt tgatggaata atccccacca aagcggtact
     1561 ctcgcttgct ggttgcccaa ttcagagttc atttg
//
LOCUS       DANLTI010000219         1587 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.225, whole genome shotgun sequence.
ACCESSION   DANLTI010000219 DANLTI010000000
VERSION     DANLTI010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.225"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            322..576
                     /locus_tag="PXB09_002656"
     CDS             322..576
                     /locus_tag="PXB09_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234703.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFCNYQQFMPEVEAKESLR
                     KQEPELDDRYNEEEYSEEEYPDENDASDENDNYDETYNVF"
     gene            776..952
                     /locus_tag="PXB09_002657"
     CDS             776..952
                     /locus_tag="PXB09_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234704.1"
                     /translation="MATSSFDKRFVVKDPKAVKVLIEALQSPIKVVLPKKDLEKEEKE
                     ALCAIKKRLASMGL"
     gene            913..1464
                     /locus_tag="PXB09_002658"
     CDS             913..1464
                     /locus_tag="PXB09_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234705.1"
                     /translation="MCNQKTLSLYGLVKELGIEKTQLFLEQAFSCSRNKDVESFLLNK
                     AIRFETALAAATHLIINEQGDILAYFTLSFKEIEVEVSKSQLKKLTAGLSNDSHLRVL
                     LIGQIGKNEKVIDNPAKLPDILNHIYAQLYKAQRVLGGRVVILECENTPKLLELYKQN
                     KFQILNTIGSENGLKTLFFIPDF"
BASE COUNT          586 a          273 c          266 g          462 t
ORIGIN      
        1 ccgctactca acatacaggg atggttatct tgataacgct cacgatactc ttgagcaata
       61 gctagtaatt gctgattagt catataaagt ctccaataac ataataaacc tgaaaacgtt
      121 cttagtattc tggcaacatt tttataaata gaaaccaaaa actatattca aatcattttt
      181 agtttctgct caacattcct atgtttttcc atacactgaa gtaaatttac ctaaccctat
      241 tttgctgtga aaccaaaact cctcacgctt atccttagta gcatttcgat gtcgctcact
      301 tatgccaccc ctcaattagg gatgatatgc cacgctgatc ctgaatatgt aaaatacaac
      361 tacgccggac tttgggaaaa aggcagcgat ggcacttttt tctgcaatta ccagcaattt
      421 atgcctgaag ttgaagctaa agaatcacta aggaaacaag aaccagaact tgatgataga
      481 tataacgaag aggaatatag cgaagaagaa tatcctgatg aaaatgatgc cagcgatgaa
      541 aacgataact acgatgaaac ttataatgtt ttctagtatg tatatggaaa ccggaggaat
      601 ccgtgattga aaaggcttgc atttccaaat atagtctata tattgtggta attgaaagta
      661 tttctatgct aacaagcata aggctatgta atcgaaaacc acccacaagg cctaaataca
      721 gtattattac agccatgagt aaccatggta atttaaatat ttaaggagtt ctataatggc
      781 aacatcatca tttgataaac gctttgtagt caaagatcca aaagctgtca aggtattaat
      841 tgaggcatta caaagcccaa tcaaagtagt tttacctaaa aaagacttag aaaaagaaga
      901 gaaagaagca ctatgtgcaa tcaaaaaacg cttagcctct atgggcttgt aaaagaacta
      961 ggtattgaaa aaacacaact ctttttggag caagcatttt cttgcagtag aaataaagat
     1021 gttgaaagtt ttctacttaa taaagcaatc agatttgaaa ccgcattagc agcagcaaca
     1081 catttaatca ttaatgaaca gggcgatatt ttggcttact ttaccctctc ttttaaagaa
     1141 attgaggtgg aagtaagcaa aagccaatta aaaaagctaa ctgctggttt aagtaatgat
     1201 tcacatttaa gagtattgct tatcggtcaa atcggcaaaa atgaaaaagt aattgacaat
     1261 ccagccaaat tgccagatat tctaaatcat atctatgcac aactttataa agcacaacga
     1321 gttttaggtg ggcgagtcgt tatattagaa tgtgaaaata cgcctaaatt attagaacta
     1381 tataaacaaa ataaatttca aattctcaat accattggaa gtgagaatgg tctaaaaaca
     1441 cttttcttta ttcctgattt ttaactacag ctaatatttc attagaagaa agtcgccagc
     1501 tttgtcagga agtcatatat gggagaaaga acaatgtctc tacttaaaaa agcacaaacg
     1561 tttatttcta tttttaatga cgtgcga
//
LOCUS       DANLTI010000220         1547 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.226, whole genome shotgun sequence.
ACCESSION   DANLTI010000220 DANLTI010000000
VERSION     DANLTI010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.226"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..179
                     /locus_tag="PXB09_002659"
     CDS             <1..179
                     /locus_tag="PXB09_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234706.1"
                     /translation="LRTTYDYLEIENKRYYVLSIHRNNIYVLGEKTKDNDEFLFFNQD
                     TLKYYRINITKMPN"
     gene            complement(233..1378)
                     /gene="lldD"
                     /locus_tag="PXB09_002660"
     CDS             complement(233..1378)
                     /gene="lldD"
                     /locus_tag="PXB09_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDL5234707.1"
                     /translation="MIISSANDYRRAAKRRVPPFMFHYADGGSYAEQTLRRNVSDLED
                     IALRQRVLKDMSQLDTGIELFGEKLSMPVTLAPVGALGMYARRGEVQAAKAADNKGIP
                     FTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPT
                     PGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNVSNYMGKPIDLN
                     NYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIIVSNHG
                     GRQLDGVLSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMLALGADCTMIGRSFVY
                     ALSAAGQAGVENLLDIFLKEMKVAMTLTSNAKISDIGRDALVDLSNL"
BASE COUNT          458 a          365 c          327 g          397 t
ORIGIN      
        1 agctgagaac aacgtatgat tatcttgaaa ttgaaaataa gcgatattat gtcttatcta
       61 ttcatcgcaa taacatttat gtgctgggcg aaaaaactaa agataacgat gaatttctct
      121 ttttcaacca agatacattg aaatattacc gcattaatat taccaaaatg ccaaattagc
      181 ctatctaaaa taacaatccg cacctaaaac gtgcggattg tggctatttg agctaaagat
      241 tacttaaatc taccaaagca tctctgccga tgtcgctaat tttagcattg ctggtaagtg
      301 tcatcgccac tttcatttct ttaaggaaga tgtcgagcag gttttccaca ccggcttgac
      361 cggcggcgct aagagcgtaa acaaaggaac gcccgatcat cgtacaatct gcgccgagag
      421 ccagcattct caccacatct aagccgttgc ggataccaga gtcggcaagg attttgatct
      481 ccccttttac tgcatcggca atgcttggca gggctttggc agaagaaagt accccatcta
      541 actgacgacc accgtggttg gagacgatga taccgtccgc accaaatctt acggcatctt
      601 tagcatcttc tgggtcgaga atgcctttga tcaccatcgg gccgtcccaa aattcacgaa
      661 tccactctaa atctttccac gaaattgatg ggtcgaaatt atcggtcagc cagccgatgt
      721 agttgttcag atcaatcggt ttacccatat agtttgacac attgcctaac gtgtggggtt
      781 taccgtgaat gcccacgtcc cacgcccaaa acgggtgaac cattgcctgc aacacacggc
      841 gaatgtcttt gtatgggccg ctcattccgg agtgcatatc acgataacgt gcgccggggg
      901 tcggcatatc tacggtaaac actagcgtgg aacaaccggc ggctttggct cgttccaatg
      961 catttttcat aaagccccga tcttttaaca catagagctg aaaccacatc gggcgtttga
     1021 ttgccggtgc aacctcttca atcgggcaaa tagagacagt ggaaagggta aacggaatac
     1081 ctttgttatc tgcggctttg gccgcttgca cttcgccacg gcgggcatac attcctaatg
     1141 caccgacagg ggcgagggtc accggcatag acagtttttc gccgaacagc tcgatgccgg
     1201 tgtctagttg cgacatatct tttaacacac gttgacgcag ggcgatgtct tccaaatcgc
     1261 tcacattacg acgtaaggtc tgctcggcgt aagaaccgcc atccgcataa tggaacataa
     1321 aagggggaac acgacgtttt gccgcacggc ggtaatcgtt tgcagatgaa atgatcattt
     1381 aaaacctcat aaatcattaa gaaaaaagtg cggctattct actttaaaat aaaaataaga
     1441 attactacta tttgcaaaat atgagaaata gatcacattt ttgttacaaa ccaattagca
     1501 taaaaataca attgcacaaa aagcaaccaa caaaacaatt gattatt
//
LOCUS       DANLTI010000221         1487 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.227, whole genome shotgun sequence.
ACCESSION   DANLTI010000221 DANLTI010000000
VERSION     DANLTI010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.227"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            439..714
                     /locus_tag="PXB09_002661"
     CDS             439..714
                     /locus_tag="PXB09_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5234708.1"
                     /translation="MAKATVARRIKNAINGNFGDHKSLAGTGGLYEMRIATGAGYRIY
                     YAQQGNVIYILLHGGDKSTQQADIEKAKALWAELKTTGESNGNNTNQ"
     gene            692..1015
                     /locus_tag="PXB09_002662"
     CDS             692..1015
                     /locus_tag="PXB09_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5234709.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNNVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
BASE COUNT          517 a          269 c          268 g          433 t
ORIGIN      
        1 tttttgtcct atcaaaaaat gaacagttta ctattttgtc ctagaattgt cctatattgt
       61 cctatattgt cctatgccaa taggacaatt ttaggggcga tgaacccttg aaaatcctag
      121 aattgtccta ttgtcctaat tgtcctatac ttttttctat attttataaa agtgttttgg
      181 aaaagtgatt tttgataaaa atccaaatct acccaaattg taattttatg ctacataatt
      241 taaaagcgtg aacaatgttc aatgatatga ataattgaaa ctgctctctt ttcaaaattt
      301 aaccacttga ttatttgtat cttaatggat acactaagca ataaatagaa taagaggctg
      361 gcaatgacag agcaaaccac taatcaaatc atcattaccg ataatttttc aaaatagctt
      421 gagaatttaa agaaccctat cgcaaaagca acggtagcaa ggcggataaa aaatgcgatt
      481 aatggcaact ttggcgatca taaatcttta gccggtacag gcggacttta tgaaatgcgg
      541 atagcaacag gagccggata tagaatttat tacgcacaac aaggaaatgt aatttatatc
      601 ttgttacacg gcggcgataa atcaacacag caagccgata tagagaaagc gaaagcatta
      661 tgggctgaat taaaaactac aggggaaagc aatggaaaca atacaaatca atgaacaggc
      721 agcagaaaag cacggtttac gcccttttga cgtggcggag tttttaaccg atgaggcaac
      781 tattcaagcc tatttagcgg aagtgttaaa agagggcgac caagacgaat ttttagaagc
      841 cttgaacaat gtggcaaggg caaggggaat ggcggagctt gccaagcaaa cagggctagg
      901 gagagagagc ctatataaaa ccctagccaa aggcagcaaa ccacgctttg acactattca
      961 aaaaattcta ggggcattca atttagtgct tattccacaa gtcaaaaatg gctaaaactt
     1021 atcacttgct acctgccaaa acctcacatt caaatagccg ttgattgata ttaacggctt
     1081 ttttattgct taattctgta ccaattacgc accgattgcg gatcaatacg gggcaagttt
     1141 tcgcaaaacc ttaatgaaat atgaccgctt gtgattttgt acaaaacgac acaaaccaat
     1201 gtataaaatc aaaacttgcc acaaatggcg gaatgatatt aaatgcccca caaactagca
     1261 gtatttctta atgacttttc attttaaggg tacatttaag ggtatgttta acaagtctta
     1321 aatgcacttc tcaataataa caagcctcat agcatacaat tcaaactcgg ctggggacca
     1381 tttaagcgtt gcatattgtc tttcactgtc tcaaatttac tataaaatca agaacttaga
     1441 ttattttata gtctcttatt gtcttcttta gttgcattgt atcttag
//
LOCUS       DANLTI010000222         1425 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.228, whole genome shotgun sequence.
ACCESSION   DANLTI010000222 DANLTI010000000
VERSION     DANLTI010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.228"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            116..1186
                     /locus_tag="PXB09_002663"
     CDS             116..1186
                     /locus_tag="PXB09_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234710.1"
                     /translation="MKFNKKLILTFAATLVLSACGGSGSGGSSSTPNHPKPVLVPKTQ
                     NNLQAQNVPQAQNASQAQNAPQAQNAPQAQNAPQVENAPQAQNAPQVENAPQAEVTPP
                     VPQPQSQKIDGSFDKIGSVKLNKEAQTLELSRFTLVDKLGTPPKFDKVSGKKIIEEKD
                     FLVLNLSDINAEQLSGDFLIRRSDDLFYGYYHDTNGKNLVDAADKFSQYFVVYDEKRV
                     NDNISDKLTATYRKKEGFVYGSNPHTKEFAARISKLGDVEIKFENGQAQGSIKDEKDG
                     NAEIFTIKGDTKQLEITPTESNRIIIAILDQNQKSYTPGMEKAIMETKFIDSKAGNSD
                     QKYLIGEAKSDNWQAIMVSEKK"
BASE COUNT          509 a          266 c          253 g          397 t
ORIGIN      
        1 attttcataa gggaaacgtt tacgtaaaac tcctcagacc actcattctt attttatata
       61 aaaatatgtg atagacttct cgcagtttcg ttttatatat ttaaggaata actaagtgaa
      121 attcaataaa aaattaattt taacatttgc tgcaacctta gttttaagtg cttgcggagg
      181 aagcggtagc ggaggttcgt cttcaacacc gaatcacccc aaaccagtac tagtaccaaa
      241 aacacaaaat aatcttcaag cacaaaatgt tcctcaggca caaaatgcct ctcaggcaca
      301 aaatgcccct caggcacaaa atgctcctca ggcacaaaat gctcctcagg tggaaaatgc
      361 tcctcaggca caaaatgctc ctcaggtaga aaatgctcct caagcagagg ttactccgcc
      421 tgtaccacag ccacaatcac aaaaaattga cggttctttt gataaaattg gttcagtaaa
      481 actcaataaa gaggctcaaa ctcttgagct tagtagattc actttggtgg ataaattagg
      541 cacaccaccg aagtttgata aagtaagcgg taaaaaaatt attgaagaaa aagattttct
      601 cgtattaaat ttgtctgata ttaatgctga acaactctct ggcgattttc ttattcgccg
      661 tagcgatgat ctattctatg gctactatca cgatacaaat ggcaaaaatc ttgtcgatgc
      721 tgccgataaa ttcagtcaat attttgtcgt gtatgatgag aaacgggtaa atgataatat
      781 ctctgataaa ttaacagcaa cttaccgtaa aaaagaaggc tttgtatatg gttcaaatcc
      841 acatactaaa gaatttgccg cacggatcag caaattgggg gatgtagaaa ttaaatttga
      901 aaatggtcaa gctcaaggaa gtataaaaga cgaaaaagat ggaaatgctg agatctttac
      961 tattaaaggt gatacaaaac agttagagat taccccaacg gaaagtaacc gaatcattat
     1021 agcaatttta gaccaaaatc aaaaaagcta tactccagga atggaaaaag caattatgga
     1081 aactaagttt attgattcaa aggctggtaa ttccgaccaa aaatacttaa tcggtgaagc
     1141 aaaaagcgat aactggcaag caataatggt tagcgagaaa aaataaagtt atcttttgct
     1201 aaaaactgaa ataaaaaggc tgagtccggg taatatcggc ctcagtcttt taaattgtag
     1261 aaaatcatct gtagaagatc aaacctaatc tgacagtccc ccgttttaaa ttaccgtgtc
     1321 tgtcagatta atttgagctt aaattctttt ccacccaaat ccgttttcca tcaagtaagg
     1381 ttgccatcgg tgttctgcca tagcacattt ttccttgatg tgttc
//
LOCUS       DANLTI010000223         1410 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.229, whole genome shotgun sequence.
ACCESSION   DANLTI010000223 DANLTI010000000
VERSION     DANLTI010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.229"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>1410
                     /locus_tag="PXB09_002664"
     CDS             <1..>1410
                     /locus_tag="PXB09_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5234711.1"
                     /translation="YQGIDDWENSNFNFRTLNGVYYDDNLTSTELLRKFMIQRDYNTL
                     YALSSARTGNADSLAKNYHLVVAKMSYENLKKELSKKPDSTFNKLKKLYETNGEFLNE
                     YILDNFRGNPLELLTVPALKESLENQESFPSRLYQKFNIFNQAIAQTTSNITKEEIDD
                     LEKTVENFNNFKNSIDYDSDAWIFNKEEYRTYMNDNVIPFMEKVEEFTETLKTLSRDD
                     LSAEERTTKTIDSVKLRIYLNEQARNRKNYINGFVPTDWIPEITDQMTKSKNLWLKYE
                     EEAKTTLKPYQEETISRVIQDEINKKMAEIGTTTLEIGGKEHELEDLENQINALALTD
                     EEKLAEDVENDLISKLDEAKAALAKNQQTLKEKRDELLGLNNKLDSSPLVKKGKNALA
                     EGTNAFASGENAIAFGTDSQATGNNAIALGANSKANAESAIAIGKGAQALKEKALALG
                     ENAIANRASAIAIGDNHSS"
BASE COUNT          560 a          230 c          249 g          371 t
ORIGIN      
        1 ttatcagggt attgatgatt gggagaattc taattttaac tttcgaacac taaatggagt
       61 ttattatgat gataatctaa cttcaacaga actcctgcga aaatttatga ttcaaagaga
      121 ttataacact ctttatgctc taagttctgc tcgcacagga aatgctgata gtctggctaa
      181 aaattaccat cttgtagttg cgaaaatgtc ctatgaaaac ctgaaaaaag aattatccaa
      241 gaaacccgac tctacattta ataaactgaa aaagctgtat gaaaccaatg gtgaattctt
      301 aaatgaatat attttagaca atttccgagg aaatccactt gaattattaa cagtacctgc
      361 gcttaaagaa agtttagaaa accaagagtc attccctagc aggctgtatc agaaatttaa
      421 tattttcaac caggctattg cacagaccac atcaaacatt actaaagaag aaattgatga
      481 tttagaaaaa actgtagaaa atttcaataa cttcaaaaat tcaattgatt atgatagcga
      541 tgcgtggatc tttaataaag aagaatatcg cacttatatg aatgataatg taattccttt
      601 tatggagaag gtagaggaat ttactgaaac attaaaaact ttatctagag atgacttaag
      661 tgcagaggaa cgtacaacca aaacaattga ctccgttaaa ttaagaatat atctcaatga
      721 acaagcacga aatcgtaaaa attatattaa tggatttgta cctaccgatt ggattcctga
      781 aattacagat caaatgacaa aatccaaaaa tctatggtta aaatatgaag aggaagccaa
      841 aacaacatta aaaccatacc aagaagaaac aatatctagg gttatacaag atgaaattaa
      901 taaaaaaatg gctgaaatag gtactacaac actagagatt ggtggtaaag aacacgagct
      961 cgaggatctt gaaaaccaaa ttaatgcttt agctttaact gatgaagaaa aacttgcgga
     1021 agatgtggaa aatgatttaa tctcaaagct tgatgaggct aaagcagcct tagcaaaaaa
     1081 ccagcaaacg ctcaaagaaa agcgtgatga attactaggg ctaaataaca aattagatag
     1141 ctcaccactt gttaaaaaag gtaaaaatgc acttgcagaa ggcacgaatg cctttgcttc
     1201 tggtgaaaat gccatcgcat tcggcacgga ttcacaagct acaggtaata acgctatcgc
     1261 actaggtgca aattcaaaag caaacgcaga aagtgcgatt gcaattggta aaggtgcaca
     1321 agcattaaaa gaaaaagccc ttgctttagg cgaaaatgcc attgccaaca gagcatctgc
     1381 tattgcgatt ggtgataacc attcatctaa
//
LOCUS       DANLTI010000224         1383 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.230, whole genome shotgun sequence.
ACCESSION   DANLTI010000224 DANLTI010000000
VERSION     DANLTI010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.230"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..517
                     /locus_tag="PXB09_002665"
     CDS             <1..517
                     /locus_tag="PXB09_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5234712.1"
                     /translation="DSKQIPYREYAVVLGTAKFYSKDVINQYYKYRLEAAKQLVQEGK
                     VNQLLLSGDNKTPYYNEPKTMTSDLLKMGIATSKIKQDYAGYTTFYSIIRAKKVYKLP
                     PFTIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQVRMREILARSAMVFSLLIGK
                     EPESLEDIRSK"
     gene            complement(554..>1383)
                     /gene="purU"
                     /locus_tag="PXB09_002666"
     CDS             complement(554..>1383)
                     /gene="purU"
                     /locus_tag="PXB09_002666"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005641775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDL5234713.1"
                     /translation="HKILLTECPDDTGLVAKITNICYKHQLNIIKNSEFVENETKRFF
                     MRTELNGIFNDETLLTDLKFTLPEGSSYKLLPKQRKRIVILVTKEAHCLGDLLMKNYY
                     GGLDVEIAAVIGNHETLKSLVERFDIPFHLVSHENLTRVEHDKLLAEKIDEYSPDYIV
                     LAKYMRVLNPEFVARYPNRVVNIHHSFLPAFIGAKPYHRAYERGVKIIGATAHFVNDE
                     LDEGPIIMQNVINVDHTYTAEAMMRAGRDVEKTVLSQALELVLADKVFVYKNKTIIL"
BASE COUNT          441 a          233 c          263 g          446 t
ORIGIN      
        1 agatagtaaa cagattcctt accgggagta tgcagttgta ctcggtacgg caaaatttta
       61 ctctaaagat gtgattaacc aatattataa atatcgtttg gaagccgcta agcaattagt
      121 ccaagaagga aaggtcaatc agcttttgtt aagtggagat aataaaacgc cgtactataa
      181 tgagccaaaa acaatgacaa gtgatctact taaaatgggg attgcgactt caaaaattaa
      241 gcaggattat gcggggtata ccacttttta ttcaataatt agggctaaaa aagtatataa
      301 attaccgcca tttacgatta tctcccaaaa attccactgt gaaagggcat tgtttattgc
      361 aaaatttagg gatattgatg caatttgtta tgccgctaca tatccagagg gggcttatca
      421 ggtacgaatg cgggaaattt tagccagatc ggcaatggtt tttagtttgt tgataggtaa
      481 agagcctgaa tcattggaag atatccgttc taaatgagat agccggtcag ataatgttga
      541 ccggctattt tgcttataaa ataatggttt tgtttttata tacaaatact ttgtcagcaa
      601 gcactaattc taaggcttgg ctaagtacgg ttttctcgac atcacgtccg gcacgcatca
      661 tagcctctgc ggtgtaggtg tgatcaacat taatcacatt ttgcataata atcgggcctt
      721 catctaattc atcattcaca aaatgggcgg ttgcaccgat aattttcact ccacgttcgt
      781 atgcacgatg ataaggtttt gcaccaatga aagcgggtaa gaacgagtgg tgaatattga
      841 caactcggtt tggataacga gcgacaaatt ccggattcag cacccgcata tatttagcca
      901 acacaatata atcaggtgaa tattcatcaa ttttttccgc taataattta tcgtgttcca
      961 ctcgggttaa attttcgtgg ctgactaaat ggaatggaat atcgaaacgt tcaactaaac
     1021 tttttaatgt ttcgtggttt ccaatcacgg cagcaatttc tacatctaat ccaccatagt
     1081 aatttttcat cagtaagtca cctaaacaat gtgcttcttt ggtaactaaa ataacgatac
     1141 gttttctttg tttagggagt aatttatagc ttgagccttc aggtaaggta aattttaaat
     1201 cagtgagtaa ggtttcatca ttaaaaattc cgtttaattc ggtacgcata aaaaaacgtt
     1261 tagtttcatt ctcaacaaat tcagaatttt taataatatt taattggtgc ttatagcaaa
     1321 tattggtaat tttagcgaca agtcctgtat catcaggaca ttcagttaat aatattttgt
     1381 gtt
//
LOCUS       DANLTI010000225         1304 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.232, whole genome shotgun sequence.
ACCESSION   DANLTI010000225 DANLTI010000000
VERSION     DANLTI010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.232"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..442
                     /locus_tag="PXB09_002667"
     CDS             <1..442
                     /locus_tag="PXB09_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5234714.1"
                     /translation="DLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQGYTVD
                     EENVFLSEVSWAVSGSHFNDGTIAQYDIVGMWEEPRPAVTLTLPCPLKEPQENMWFID
                     NDFTIVKSMFANAPFVKKFLPQGRCFASEEDAQEWLDAMRNSRR"
     gene            520..1047
                     /locus_tag="PXB09_002668"
     CDS             520..1047
                     /locus_tag="PXB09_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5234715.1"
                     /translation="MNEEKYFSVDVSDETHVIRLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERASELFGEAEQVIEPPTLLE
                     NNGWISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIA
                     VTHWQPLPEPPKEEK"
     gene            1044..1247
                     /locus_tag="PXB09_002669"
     CDS             1044..1247
                     /locus_tag="PXB09_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234716.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
BASE COUNT          459 a          224 c          283 g          338 t
ORIGIN      
        1 tgatttaaat aaagcattgg caggtgagcc agtaaaacta agaaataatg ataaggcatt
       61 tgtaaaatac ctaattagtg atgactatat tagagataat aaagaccacc aagtacaagg
      121 gtatacagtt gatgaagaaa atgtattttt gtcagaagta tcgtgggctg ttagcggatc
      181 tcatttcaat gatggaacaa tagctcaata tgatattgtt ggtatgtggg aagaaccaag
      241 accagcagta acattgacgt taccttgccc attaaaagaa cctcaagaaa atatgtggtt
      301 tattgacaat gattttacca tagtaaaatc tatgttcgca aatgccccct ttgtaaaaaa
      361 attcttgcca caagggcgat gtttcgcttc agaagaagac gctcaagaat ggttagatgc
      421 aatgcgaaat agtcgtaggt aaatcggcag cactaacagc tgaatgctgc tgttgaattt
      481 cttgtatatc cacataaaca cggaacgcgg agaaagaaaa tgaatgaaga aaaatatttt
      541 tcggtcgatg tctcggatga gacacatgta ataaggttgc acgaaacatt agagcaagca
      601 aaacaaagct gtttaaatgg tgctactgaa gcctatgagt ttgcgggtga catggatgat
      661 cacgaaagct atgaaagcta tgaagcctat gatttaccct atgcagttta tggtgttgtt
      721 ttaggtagag caaaatcaga tattcgtcca ctaacagacg aagaaagagc atcggagtta
      781 tttggggaag ctgaacaagt tattgaacca ccaacacttt tagaaaacaa cggctggatt
      841 tccattgagg acaaattacc acctattgaa acggatgtgc tagggttatg cgatatttca
      901 ggaatgcagt taattttaat agtttcaaga gaacttgccg ataacgagtg gtattttctt
      961 agtgtaaatc aatatgggct tgatgacgat gtgattgcag taacccactg gcaaccactt
     1021 cccgaaccac caaaggagga aaaatgaccg acaccgaacg cttagacttt atcgcccaac
     1081 gcaaattaga tgtccgatat tctgatttgg tggacgaatt tattattgct agctatacca
     1141 aaccgcacga gcagtatttt cattgggcaa gaaatgccga tttacgcacg gcgattgatg
     1201 aagcaatgaa agaaatgaga ggactaaaca atgcaacaac taattaaaaa catcgaacaa
     1261 tgggcggaag accgcaattt aattaacggc tcaaccccac aaaa
//
LOCUS       DANLTI010000226         1247 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.233, whole genome shotgun sequence.
ACCESSION   DANLTI010000226 DANLTI010000000
VERSION     DANLTI010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.233"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            225..473
                     /locus_tag="PXB09_002670"
     CDS             225..473
                     /locus_tag="PXB09_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234717.1"
                     /translation="MISGEKMTWESLGASAIGGAIGGGIGATMKAGAVTASTLSALGG
                     GMGEGLYKSTSQGIKNSIGIKASCNQSGSDYGDGCDYQ"
     gene            485..688
                     /locus_tag="PXB09_002671"
     CDS             485..688
                     /locus_tag="PXB09_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234718.1"
                     /translation="MKIQFPISYQEFRENYFEKKPLLMKGAISQKDLLSWKSINEILP
                     RCDLISEDAIKVMHKGKRAHKKD"
     gene            727..1247
                     /locus_tag="PXB09_002672"
                     /pseudo
     CDS             727..1247
                     /locus_tag="PXB09_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT          408 a          177 c          294 g          368 t
ORIGIN      
        1 aagaattgtg tctattcttc ttgtaaagaa gattgtaaaa aataaaaatg tacaagatgt
       61 tattgaggct atagttctaa tagtatttgt tgtaattata aacatcatag aggaatatct
      121 cttatgaaag agttaaaaat tgaggattgc caatttgttt cggcaggctt gcacttgtta
      181 ttgtaggagc tgttgctgga gctgcatatt atgttgggaa tggtatgatt tctggggaaa
      241 aaatgacttg ggagagtttg ggagcatcag ctataggtgg ggctattggt ggcggtattg
      301 gagcaacaat gaaagctggt gcggtgacag cgtcaacctt atctgcttta ggtggtggta
      361 tgggggaggg cttgtataaa agtacttctc aaggtatcaa aaatagtatt ggtataaagg
      421 cgagttgcaa tcaatcaggt tcggattatg gtgatggatg tgattatcaa taagagagta
      481 tattatgaaa attcaatttc caatttctta tcaagaattt cgtgaaaact attttgagaa
      541 aaaaccactt ttaatgaaag gagcaatatc tcagaaagat ttactttctt ggaagtcaat
      601 aaatgaaata ttacctcgct gtgatttaat ttctgaggat gcaattaagg taatgcataa
      661 agggaaaagg gctcataaaa aagattaggg gctgtagtag attagcatca ctgctatact
      721 acaaaaatga agataaccca ttgtaaatta aagaaatctt tgcagaaaaa gcttcttgaa
      781 ttttttgttg ctgaagtgac cgctagaacc gctgctgatt tattaggtat tcaacccaat
      841 acggcagccc tgttttacca caaaattagg ctggtcattg aacaccattt agcccttgaa
      901 gctcatgaaa tttttgaggg aaaaattgag gtagatgaaa gctattttgg tggtcatcgc
      961 aaaggaaaac gagggcgagg tgcggctggg aaagtcgctg tattcggttt gttgaagcgt
     1021 caaggaaagg tgtttacaaa ataccaaatc agaaacgcta atgccggtta ttacaaggaa
     1081 aatcaagcct gacagctggg tttatacgga tacctatcgt agctatgatg cccttgatgt
     1141 gagcgaattt catcacgagc gaatcaacca ttccgaactg tttgcggaga aacaaaacca
     1201 tatcaatggc attgaaaatt tttggaatca agcgaagcga gtactcc
//
LOCUS       DANLTI010000227         1193 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.234, whole genome shotgun sequence.
ACCESSION   DANLTI010000227 DANLTI010000000
VERSION     DANLTI010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.234"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            8..256
                     /locus_tag="PXB09_002673"
     CDS             8..256
                     /locus_tag="PXB09_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HDL5234719.1"
                     /translation="MTATKKTLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLVEQSPQVFEQIARL"
     gene            308..895
                     /locus_tag="PXB09_002674"
     CDS             308..895
                     /locus_tag="PXB09_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDL5234720.1"
                     /translation="MFDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGY
                     SISNDEYYSLPYGPVLSNTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTE
                     DEYFFDCLSESDTEILEEVFATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLST
                     LLTKLGKTPSEIESILEQQAEKGTMDNLFKGLGNA"
     gene            888..>1193
                     /locus_tag="PXB09_002675"
     CDS             888..>1193
                     /locus_tag="PXB09_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234721.1"
                     /translation="MLEIKRQVTILRPTNYGKEENHYKHLYILLTDPCFDGETGKGDM
                     ILSVNCSSIKDGKALDETCILKAGTHEFITRDSFIFYRHIKIDSLDEIKANIEAGYFI
                     "
BASE COUNT          438 a          225 c          240 g          290 t
ORIGIN      
        1 agaagaaatg actgcaacta aaaaaacact ttcagacaca ttactaaaaa atcttaaata
       61 ttccccaaat gcgaagccta tcgcagacag taacgggcta tttattcttg cacagaaaaa
      121 agcgaaagta tggatttata gctatatcag ccccaaaaca ggcaagcgaa gcacaaaaaa
      181 tagaatcggt agctatccgc aaatgagctt agtggaacaa tccccacagg tatttgaaca
      241 aatcgcacgt ctttaaaata ttaaattaag agaaagcact atttgcgatg tagcaggaga
      301 taaaacaatg tttgatgaat taaaaatagc ccaagcgacc gcctatttgc tacataaggc
      361 aggcggaaca atggagcata ttaaggtaat gaaattgctt tatcttgcgg atcgcttatc
      421 gtggcaaaga tacggctatt ctatttctaa tgatgaatat tattcattgc cttatggacc
      481 ggtattaagc aacacactca acctaatgcg aggagaagaa gcgagcttat accaaaaaac
      541 cagtatttgg ggcgagtgga tagcagataa ggaagatcac aaaatcagcc ttaaaaaatc
      601 cgtaaatacc gaagatgaat acttctttga ttgcctttca gagagcgaca ccgaaatttt
      661 agaagaggta tttgcgacct ttggaaatta taagccattc gccctagtgg aatataccca
      721 taaccctaaa tacattcccg aatgggaaga cccacaaggc agaagcaagc cgatttcttt
      781 aagcacgctt cttactaagc tagggaaaac gccaagcgag atcgaaagca ttttagagca
      841 acaggcggaa aaagggacaa tggataacct tttcaagggc ttaggcaatg cttgaaatca
      901 aaagacaagt aacgattctt agaccgacca actacggcaa ggaagagaac cactacaagc
      961 atttatatat tctgcttacc gatccgtgct ttgatggtga aaccggtaaa ggagatatga
     1021 ttttaagtgt aaactgctca agcattaaag acgggaaagc acttgatgaa acttgtattt
     1081 taaaggcagg aacacacgaa tttatcacac gggacagctt cattttctac cgccatataa
     1141 aaattgattc gttagatgag attaaggcaa atatagaagc cggttatttt att
//
LOCUS       DANLTI010000228         1183 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.235, whole genome shotgun sequence.
ACCESSION   DANLTI010000228 DANLTI010000000
VERSION     DANLTI010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.235"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1052
                     /gene="sohB"
                     /locus_tag="PXB09_002676"
     CDS             <1..1052
                     /gene="sohB"
                     /locus_tag="PXB09_002676"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDL5234722.1"
                     /translation="WKEVLLNYGIFLLELLTVFGIIAVVVMLILESKKQNENGSISIT
                     NLSEKYKEQQKSLSGFFLSEEELKHQEKQEKKVAKEKAKAEKKRLKAGEECVESPSRL
                     FVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAASQLQR
                     LRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKKHD
                     IDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARHRPQLDIEQVAT
                     GEHWFGQQAIELNLVDEIATSDDLLLNAIKEKEVIELKYKEKKKLAQKLGSQFEQSAE
                     NLLAKILHKSRSTLM"
BASE COUNT          388 a          187 c          281 g          327 t
ORIGIN      
        1 tgtggaaaga agtattactt aattatggta tttttttatt agagttatta actgtatttg
       61 gcattattgc agtggtggtg atgctgattt tggaatcgaa aaagcagaat gaaaacggct
      121 caatttcaat taccaattta tctgagaaat ataaagagca gcaaaaatct ctttccggct
      181 tttttctaag tgaggaagaa ttaaaacatc aggaaaagca ggagaaaaaa gtagcaaaag
      241 agaaagctaa agcagaaaaa aaacgcttaa aagcaggcga agaatgtgta gaaagccctt
      301 cccgtttatt tgtattgaat tttaatggcg atatgatggc tcacgaagta aattccctac
      361 gccgtgaaat tgatgcggta attagcctcg cgaatccgga aaaagatgaa gttttactta
      421 aacttgaaag tccgggcgga gtggtgcacg gttatggatt ggctgcttcg cagttacaac
      481 gtttgcgtga tcgcaatatt tatttaaccg cagcggtaga taaagtagct gccagcggtg
      541 gttatatgat ggcgtgtgtg gcgaataaaa ttgtctctgc cccatttgcg gtgattggct
      601 cagtgggggt ggtggctcag gtgccgaata tccaccgctt actgaaaaaa cacgatattg
      661 atgtggatgt gatgactgca ggtgaatata aacgcacggt gacgctggtg ggagaaaata
      721 ccgaaaaagg gaaacagaaa ttccagcaag aactggaaga aacgcactct ctgtttaagc
      781 aatttgtggc tcgacaccgc ccacaactgg atattgagca ggttgcaaca ggcgagcatt
      841 ggtttggtca gcaagcgatt gagctaaatt tggttgatga gattgcaacc agtgatgatc
      901 tgctcctcaa tgcaattaag gaaaaagaag tgatcgagct aaaatataaa gagaagaaaa
      961 aacttgctca gaaattgggt tctcaattcg agcaatcagc agagaacctg ctcgctaaga
     1021 ttttacataa aagtcgttca acgctgatgt agcgtatata ttattaaagg gctatcgttt
     1081 atatagcccc ttattttatc agttagtaat agaatgaagt atttgttcac tatttaaatg
     1141 acctggaata cttttcttta aattgagtga agaatctaac aat
//
LOCUS       DANLTI010000229         1147 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.236, whole genome shotgun sequence.
ACCESSION   DANLTI010000229 DANLTI010000000
VERSION     DANLTI010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.236"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..807
                     /locus_tag="PXB09_002677"
     CDS             <1..807
                     /locus_tag="PXB09_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5234723.1"
                     /translation="TISEAFKLDISKVYVALSKDLGITIKSPEQAATYVNDERYRRFN
                     TLIDKKFNDSVLIELLNCFEKRDDKRIEELVTDEAAIPTIFEYILGIIWYKVSERQGN
                     ILDFMKLSLEANLLPKTHAAGGYADIIYEYEACTSYPKHSLLLEATLADGNNQRRMEM
                     EPVSRHLGDYRIRFNNPFDYSLFVSTYLDKNVISDFRYRKIIPYTRDEETITGMKIIS
                     MDTDSLKKIIENKVKYKYLYEIFDKYHEMPLETVDWHDGMIKEATGEYKS"
     gene            869..>1147
                     /locus_tag="PXB09_002678"
     CDS             869..>1147
                     /locus_tag="PXB09_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDL5234724.1"
                     /translation="MKNRIEHPKIFISYAWGSQEHDEKVIALATNLKGDGIDVIFDKW
                     QLKEGNDTFKFMEKSVLDESITNVLILIDPIYAKKANERAGGVGTETQI"
BASE COUNT          436 a          138 c          234 g          339 t
ORIGIN      
        1 actatatcag aagcattcaa gttagatatt agcaaagtat atgtagcttt aagtaaagat
       61 ttaggaatta caattaagag tccggaacaa gctgcaactt atgtaaatga tgaacgatac
      121 agaagattta atactttgat cgataagaaa tttaacgatt ctgtgcttat agagttacta
      181 aattgttttg agaaacgtga tgataaaagg attgaagaac ttgttacaga tgaggctgca
      241 atacctacta tttttgaata tattttggga attatatggt acaaagtgag cgaaagacaa
      301 ggaaatattt tggatttcat gaagttatca ttagaagcca atttattgcc gaagacccac
      361 gcagctggag gttacgcaga cattatatat gaatatgaag cgtgcacctc ttatccgaaa
      421 cattcattat tgcttgaagc aacccttgca gatggaaata atcaaagaag aatggaaatg
      481 gagcctgttt caagacattt aggcgattat aggattagat ttaataatcc gtttgattac
      541 agcctatttg ttagcacata cttagataaa aatgtaatct cagattttag atatagaaag
      601 ataattccat acaccagaga tgaagaaacc attacaggaa tgaagattat ttcaatggac
      661 acagattctc ttaagaaaat aattgagaat aaggttaagt acaagtatct gtatgaaata
      721 tttgataaat accatgaaat gccattagag actgtagatt ggcatgatgg gatgataaaa
      781 gaggctactg gagagtataa gtcatagtga ttataagata gtgagaaaga atacttattt
      841 tgaaaggaat acatgggaat tgatacagat gaagaataga attgaacatc ctaagatttt
      901 tatttcatat gcttggggat cacaggaaca tgatgagaag gttattgctt tagctacaaa
      961 tcttaaagga gatggtatag atgtcatttt tgataaatgg cagctaaaag aaggcaatga
     1021 tacctttaaa ttcatggaaa aaagtgtttt agatgagagt attaccaatg tactgattct
     1081 tatagatcct atttatgcaa agaaagcaaa tgaaagagcc ggtggcgtag gtacagaaac
     1141 acagatt
//
LOCUS       DANLTI010000230         1135 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.237, whole genome shotgun sequence.
ACCESSION   DANLTI010000230 DANLTI010000000
VERSION     DANLTI010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.237"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            61..306
                     /locus_tag="PXB09_002679"
     CDS             61..306
                     /locus_tag="PXB09_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234725.1"
                     /translation="MTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKEFIE
                     PGATIRRSNDQPSIGSVDCDPRKKIHYKFDVHLMNTL"
     gene            525..>1135
                     /locus_tag="PXB09_002680"
     CDS             525..>1135
                     /locus_tag="PXB09_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL5234726.1"
                     /translation="MCKKAFPLWGLIFGLLLSTSAFSVSKNFNYQNILMESLHFSENI
                     ELSSLSKDWLLYSDRNTYHKYQNDEFEFQDKIEQAGKKLQKLVDDRKSEEAPIVFTIP
                     VNSEFGNYDFEQGKFEYQPLMNGHMYISSNQYTENLPRKINLYVSNPEFIDGIPMGKD
                     KAKEFLQKRKNSLGNINRSVILYVDVQFEKAEGLDNLTGKVLS"
BASE COUNT          393 a          176 c          218 g          348 t
ORIGIN      
        1 ggaaatgatt acgagtattc gtatgacaaa actactttca aaaacccgat taaaaaggca
       61 gtgaccaacg acggttcgat tatcgccaga ggctcaggtt ttactactta tgccttagag
      121 ttggaaaatg atggcttgaa atatctagtc ggatttgttc aaccaaatgg aaatgcaaaa
      181 gagtttattg agccgggagc aacaattcgc cgtagtaatg atcaaccaag tattggttct
      241 gtggattgtg accctcgtaa aaaaatccat tataagtttg atgttcattt gatgaatact
      301 ttataatacc tttgtggtgc tagagctagc ccaagttaaa aaagacaaag ctcggcagat
      361 gaacaattgt ggtgtcagag ctgacccacg ttaaaaaaca caatgctcgg taggtaaatc
      421 ccttaggttt aaaaaatcta agggattttt gtttaaaaga cttgctcttt attatcaggt
      481 ggatctatca taatttaaac tctctaatgt gtcaggagat aaaaatgtgt aaaaaagctt
      541 tcccattatg gggcttaatc ttcggattac tgctatccac ttcagcattc tcagtgtcta
      601 aaaacttcaa ctatcaaaac atattgatgg aatcattaca ttttagtgag aatatcgagc
      661 ttagttcgtt atctaaagac tggttacttt acagcgatag aaatacgtat cataaatatc
      721 aaaatgacga gtttgagttt caggataaaa ttgagcaagc tggtaagaaa ctacaaaaac
      781 tggtggatga cagaaaatct gaagaagccc ctattgtttt cacaattcct gtaaactcag
      841 aattcgggaa ttatgatttt gaacaaggta agtttgagta ccaacccctg atgaatgggc
      901 atatgtatat ttcttctaat caatatactg aaaatttgcc aagaaaaatt aatctgtatg
      961 tttctaatcc cgagtttatt gacggtatac ctatgggcaa ggataaagct aaagagtttt
     1021 tacagaagcg taaaaattct ttgggaaaca taaatcgctc tgttatattg tatgttgatg
     1081 tacaatttga aaaagcagaa ggattagata atttaacagg aaaagtttta tctta
//
LOCUS       DANLTI010000231         1108 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.238, whole genome shotgun sequence.
ACCESSION   DANLTI010000231 DANLTI010000000
VERSION     DANLTI010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.238"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..1074
                     /locus_tag="PXB09_002681"
     CDS             <1..1074
                     /locus_tag="PXB09_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234727.1"
                     /translation="EKNYGELYSSFLIAVGVKEFLDKGFIPNDNYRDIIALLPVALYV
                     FHLRSLKHIKNLESNSYLDEEGRDTVNKYKAFFSIFEAEIRDATCICDNKIVTINGEV
                     CCDIKEVARKIVIEFLNEVDIGNKVKFYYPDERHELFVELLIVLATLRIYRNRNIFFF
                     EKGFFNFFPEFITILGTGAFNGFLDFPSLVGKVFPEIIDTINEGLDLDIAIENFEVLS
                     QEEMTECMGLYEQALIKKAEEGEIGLLNVDEINSFYEDNSELILLAKQPMVEEIIPKP
                     DSKASSAILKFFDSNSNILIAKLKESGLQLSAVALQNDQNIARVANVVYNLLPGMVRI
                     FVSYDTVENFLLNNRQWLINKLV"
BASE COUNT          389 a          131 c          219 g          369 t
ORIGIN      
        1 gaaaaaaatt atggtgaatt atatagttcc tttctgattg cagtgggagt gaaagagttt
       61 ttagataaag gatttatacc taatgataat tatagagata ttattgctct actcccagta
      121 gcgttatatg tctttcactt aagatctttg aaacatatca aaaatctaga atctaacagt
      181 tatttagatg aagaaggaag agatacggta aataaataca aggcattttt ctctattttt
      241 gaagcagaga ttcgagatgc aacatgtatt tgtgacaata aaattgtaac aattaatggt
      301 gaggtgtgct gtgatattaa ggaggtagca aggaaaattg ttatagaatt tctaaatgaa
      361 gtggatattg gtaataaagt taagttttat tacccagatg aaagacatga gctttttgta
      421 gagctgctca ttgttctagc aacattaaga atatatcgta atagaaatat attcttcttt
      481 gaaaaggggt tttttaactt ttttcccgaa tttatcacta ttctcgggac tggtgcgttt
      541 aatggatttt tagacttccc tagtttggta ggaaaggttt ttccagaaat tattgatacg
      601 ataaatgagg gtttagattt agatattgcg attgagaact ttgaagtgtt gagtcaggaa
      661 gaaatgactg aatgtatggg tttatatgag caggctctca ttaagaaagc tgaagaaggc
      721 gaaattggtt tattaaatgt tgatgaaata aatagctttt atgaagataa tagtgagcta
      781 atcttacttg ctaaacaacc tatggttgaa gagataatcc ctaaaccaga tagcaaagcc
      841 tcctctgcaa ttctaaaatt ctttgattca aactcaaata tcttaattgc taaattaaaa
      901 gaaagtggtt tgcaattaag tgctgtggca ttacaaaacg accaaaatat cgcacgagta
      961 gcaaatgtcg tttataactt attgccgggc atggtaagaa ttttcgtaag ttacgatacc
     1021 gtagaaaatt tcttattaaa taaccgccaa tggttgatta ataaattagt ttaatttgga
     1081 ggggaagaac tatggataaa caatataa
//
LOCUS       DANLTI010000232         1093 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.239, whole genome shotgun sequence.
ACCESSION   DANLTI010000232 DANLTI010000000
VERSION     DANLTI010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.239"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..192
                     /locus_tag="PXB09_002682"
     CDS             <1..192
                     /locus_tag="PXB09_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234728.1"
                     /translation="PQDGSVIDWDNIKNAKLTKYPLDNSEKRTSYLGCFTTDVSESYT
                     VDGESVRDIQLNALRKVNE"
     gene            192..560
                     /locus_tag="PXB09_002683"
     CDS             192..560
                     /locus_tag="PXB09_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234729.1"
                     /translation="MKITLNLGIEYNGKIRRDCTVRLLTMGGQCTAQEMIADLGFEEN
                     SEALSKREQTLVDMAYLSQQVTFDGIYQGNVTAQFLFDNLATEDYWQLIEATLTLRKK
                     RLENGVSQSESESPANPDLA"
     gene            590..778
                     /locus_tag="PXB09_002684"
     CDS             590..778
                     /locus_tag="PXB09_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234730.1"
                     /translation="MILLSKFAITAEQVWQMPLLEVFAWIESYLESEGVKTPHSPMGA
                     NSEVKRESYVFTRCGKIE"
     gene            831..>1093
                     /locus_tag="PXB09_002685"
     CDS             831..>1093
                     /locus_tag="PXB09_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234731.1"
                     /translation="MAKNMKVQLELTAKDTASPVLNQAAKTAEKAFKNTERAAQKSGN
                     AQTQAAQKAANATESSNRKIEQSYRNARRVAADVSRARETLGVR"
BASE COUNT          348 a          216 c          274 g          255 t
ORIGIN      
        1 cctcaagacg gttcggtaat tgattgggat aacattaaaa atgcgaagct cactaaatac
       61 ccgttagaca atagcgaaaa acgcacctct tatttaggct gttttactac cgatgtgagc
      121 gagtcttaca ccgttgatgg tgagtcggtg cgtgatattc aactcaacgc attgcgtaag
      181 gtgaatgaat aatgaaaatc actttaaatc ttggcattga atataacggg aaaattcgcc
      241 gtgattgtac ggtgcgattg ctgacgatgg gcggtcaatg cacggctcaa gaaatgattg
      301 cggatttagg gtttgaggaa aactcggaag ccctatcaaa gcgtgaacaa accttggtcg
      361 atatggctta cctttcgcag caagttacct ttgatggtat ttatcaaggt aatgtgacgg
      421 ctcaattttt atttgacaat ttagctaccg aagactactg gcagttgatt gaggcaacgc
      481 tcacactccg aaaaaagcgg ttagaaaatg gggtgagcca aagcgagagc gaaagcccgg
      541 caaatcccga tttggcgtag cagaagcctt taagcagtac cgacaagcgg tgattttact
      601 ctcaaaattt gcaattaccg ccgagcaggt atggcaaatg ccgttgcttg aggtatttgc
      661 gtggattgag agctacttgg agagtgaggg cgtaaaaaca ccgcatagcc caatgggtgc
      721 gaatagcgaa gtgaaacgcg aaagctatgt ctttactcgg tgtggcaaaa ttgaataggg
      781 gcgaaagccc cttttttgta ctttaaaatg agtttaaaga gactttaaaa atggcaaaaa
      841 atatgaaagt gcaactggaa ttgacggcaa aagatactgc ctccccagtt ttaaaccaag
      901 ccgctaaaac cgccgaaaaa gcctttaaaa atacagagcg agcggcacaa aaaagtggca
      961 atgctcaaac gcaagcagca cagaaagcag cgaatgctac agaaagctca aatcggaaaa
     1021 tagaacagag ttaccgtaat gcccgccgag tggctgccga tgtgagccga gcccgtgaaa
     1081 cattaggtgt tcg
//
LOCUS       DANLTI010000233         1086 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.240, whole genome shotgun sequence.
ACCESSION   DANLTI010000233 DANLTI010000000
VERSION     DANLTI010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.240"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            233..823
                     /locus_tag="PXB09_002686"
     CDS             233..823
                     /locus_tag="PXB09_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234732.1"
                     /translation="MTTQITTAQINDLLKSHDIQGYANEWQGRRIYINLSAKNNESKG
                     DRNYQLYIDLATGELVSKLGKGLTTRAFDAAVKAFENAFNAKDTAENTAPVESKETEQ
                     ENKQETTKLVITKPTLKGSEKQIDSANEIINLFIAKIGDTSIPVTATQEQITQAQAMV
                     DNFFAMTNAGKWIEKFKGLNDNSEPKQFWLSVKYGW"
BASE COUNT          436 a          202 c          201 g          247 t
ORIGIN      
        1 ttaaattatt gaattacatt taaaatacac acaaaaacac ccacaataaa gcaatacctc
       61 agcactcgaa gagcaagatc gtctttgagg gatagggggt aaaataaatt ttttaaaaat
      121 ttgcaaaaaa atttaaaaaa actcttgcaa taaaattatt atgcgcctat aattaggcgc
      181 ataaagcaag gctagggagc cagctaataa ccatcagcca aagggggcta aaatgacaac
      241 tcaaattaca accgcacaaa tcaacgactt attaaaatct cacgatatcc aaggctacgc
      301 caacgaatgg caaggtcgcc gcatttacat taacctttca gcaaaaaata acgaaagcaa
      361 aggtgatcgg aattaccagt tgtacattga cctagccaca ggcgagttag tgagcaaact
      421 tggcaaagga ttaacaacca gagcgtttga tgctgccgta aaagcttttg aaaacgcttt
      481 taatgctaaa gacaccgctg aaaatacagc gccggtagaa agcaaagaaa cagagcaaga
      541 gaacaaacaa gaaacaacta agcttgtaat cacaaaacca acattaaaag gctctgaaaa
      601 acaaattgat tcggcaaacg aaatcatcaa tctttttatt gcgaagattg gtgatacctc
      661 tatcccagta acagcaacgc aagaacaaat tactcaagct caagcaatgg tagataattt
      721 ttttgcaatg acaaacgctg gaaagtggat cgaaaaattt aaaggtctaa atgataatag
      781 cgaaccaaag caattttggt tatccgtaaa atatggatgg tagattgaga taacaaataa
      841 gccgtaagag caaaggctta cggctaaaac aaacagataa ctggagatta ttatgactac
      901 acaagtaaca ccacaaatta tgcgcattat cgggcaaatt gtcgctgcta cttatggtga
      961 cgatgtgcca acaaacgtac agacaataat cttgagatac cctataagag gcatagggtt
     1021 tatctctagt cgcagagagc tatctattaa caatggagag atagcaagat taatggataa
     1081 aatacc
//
LOCUS       DANLTI010000234         1077 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.241, whole genome shotgun sequence.
ACCESSION   DANLTI010000234 DANLTI010000000
VERSION     DANLTI010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.241"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>1077
                     /locus_tag="PXB09_002687"
     CDS             <1..>1077
                     /locus_tag="PXB09_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234733.1"
                     /translation="IFEYEIYKPYSIYDDETISSLTLFNCFRYSKNKITHQIQVEYFC
                     FDKKQWIKEVHKYSKGGFKRCVNIPFFRFSKFFLNNAQRTAFSYVTHYIKKHSYAYSK
                     ADNIQELLVKFFSRKQPVMQSAFNHQKRIVKWLWAEFWDKNIISMTLRIDGYRNANLW
                     HYLRYQSRIEVLYKIANEHPNLLPLLAYVKPEYWKCSDLFSYQNWVRSRDKQPFILYA
                     KCQDKMLCESKGQWRWLKKQSRIVVDQCFLHVNQWQLLTEIQMPFKIPVCVICFILTN
                     FSMISCELDRSRQRRLLSIFIQYIYHYWKDNGFRQLKIHLSHLRVLFQDIEDYMIHEG
                     YLHGIPQTWQHLVYHLNLINSNTS"
BASE COUNT          375 a          155 c          175 g          372 t
ORIGIN      
        1 tatctttgaa tatgaaattt acaaacctta ttctatctat gatgatgaaa ccatttcttc
       61 tctaacttta tttaactgtt ttagatatag taaaaacaaa attactcatc aaattcaagt
      121 cgagtatttt tgttttgata agaaacaatg gataaaggaa gttcataaat attcaaaagg
      181 tggatttaag agatgtgtta atatcccttt ctttagattt agtaagtttt tccttaataa
      241 tgcacaacga acagcctttt catatgtaac tcattacatt aagaaacatt cctatgccta
      301 tagtaaggca gacaatattc aagaattatt agtaaagttt ttctctagaa agcaacctgt
      361 tatgcaaagt gcatttaatc atcaaaaaag gattgttaag tggttatggg ctgaattttg
      421 ggataagaat attatctcga tgacacttag aattgatggt tatagaaatg ctaacttatg
      481 gcattattta cgttatcaat cacggattga ggtattgtat aaaatagcaa atgaacaccc
      541 gaatctacta ccattattag cctatgttaa acctgagtac tggaaatgct cggacttatt
      601 tagttatcaa aattgggtaa gaagccgtga taaacagcct tttattttgt atgctaaatg
      661 ccaagataag atgttatgtg aatcaaaggg gcaatggaga tggttaaaaa aacagtcgag
      721 aatagttgta gatcaatgtt ttctacatgt taatcaatgg cagttattaa cagaaattca
      781 aatgcctttc aagatcccag tatgtgtcat atgtttcata cttactaatt ttagcatgat
      841 cagctgtgag ttagatcgat ctagacaacg tcgattactc tctattttta ttcaatatat
      901 ctatcattat tggaaagata atgggtttag acaattaaag atacatcttt ctcatctgag
      961 agtgcttttt caagatattg aagattacat gatacatgag gggtatttac atggtatacc
     1021 tcagacttgg caacatttgg tttaccacct caaccttata aattcaaata catcaaa
//
LOCUS       DANLTI010000235         1033 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.242, whole genome shotgun sequence.
ACCESSION   DANLTI010000235 DANLTI010000000
VERSION     DANLTI010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.242"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(109..819)
                     /locus_tag="PXB09_002688"
     CDS             complement(109..819)
                     /locus_tag="PXB09_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDL5234734.1"
                     /translation="MFMVIQLALYNLQTYEVGRNATTIFMTTDKVYTGGSTWTYLFAD
                     ADNKITSVREMNGFGDVEKEFKCGEYKEAVTIASKEDLAKRKTQPRLWSSIYMSPEQN
                     MMWVTDNTSKNLENAKQDAFKQCEKNGGRNCQMILSFSNMCLAFAQGYKDGQGFEDFG
                     YGIVSSLAEENALENCNQKGGSSCLLSAPAVCAIPCDILSNNKCMYDQPQIIIPGKNN
                     NQPINPPANGNGEHWLSN"
     gene            complement(788..934)
                     /locus_tag="PXB09_002689"
     CDS             complement(788..934)
                     /locus_tag="PXB09_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234735.1"
                     /translation="MIKPLDSVYWRGKDVSEFFARKRLPDTAVQCVKDNELSYVYGYS
                     TSFV"
BASE COUNT          352 a          206 c          148 g          327 t
ORIGIN      
        1 aataaattgt aaatttttat ttaccaagat ttttagcaaa gttttcacta aaaatgaccg
       61 cttgcaggca ataaaaaagt gcgtttccgc actttttact aaaatgattt aattactcaa
      121 ccaatgctca ccgttgccat tagctggtgg attaatcggt tggttattat tcttacctgg
      181 aataataatt tgaggctgat cgtacataca tttgttgttc gacaatatat cacagggaat
      241 agcacatacg gcaggggcag aaagaagaca acttgaacca cctttttgat tacaattctc
      301 taatgcattt tcttcagcaa gactactaac gataccatac ccaaaatcct cgaagccttg
      361 accatcttta taaccttgtg caaaagcaag gcacatatta ctaaacgata agatcatttg
      421 gcaattacga ccaccgttct tttcacactg tttaaacgca tcttgcttcg cattttctaa
      481 atttttagac gtattatcag tcacccacat catattttgt tcaggtgaca tataaattga
      541 tgaccataaa cgaggctgtg ttttacgctt tgctaagtcc tctttactgg caatggttac
      601 cgcttcttta tattcaccac atttaaactc tttttcgaca tcaccaaaac cattcatttc
      661 acgaacagaa gtgattttat tatcagcgtc agcaaaaaga tatgtccaag tcgatccacc
      721 tgtataaacc ttatctgttg tcataaatat agtggttgca ttacgaccaa cttcataagt
      781 ttgcaaatta tacaaagcta gttgaataac cataaacata gcttaattca ttatctttta
      841 cgcattgaac cgctgtatca ggtaaacgtt tacgtgcaaa aaattcagat acatctttac
      901 cacgccaata aacactatct agtggcttaa tcattgtaga acaagcggtc aaaaataatg
      961 acaaaataac aaatagcaaa gaacttattt tgaaatttat aataattacc tcaaaagaaa
     1021 aaagagcaag ctt
//
LOCUS       DANLTI010000236          981 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.243, whole genome shotgun sequence.
ACCESSION   DANLTI010000236 DANLTI010000000
VERSION     DANLTI010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.243"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(48..251)
                     /locus_tag="PXB09_002690"
     CDS             complement(48..251)
                     /locus_tag="PXB09_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234736.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
     gene            complement(248..739)
                     /locus_tag="PXB09_002691"
     CDS             complement(248..739)
                     /locus_tag="PXB09_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5234737.1"
                     /translation="MNEDKFFSVDVSNDIHILNLHETLEQAKQSCLNGATEAYEFADD
                     MDDHESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERESELFGEAEQVIEPPTLVENNG
                     WISVKDRLPEIRKEVLITNNFIMIAQFNGESWFKPGGFLGIQPVYGVTHWQPLPEPPK
                     EEK"
BASE COUNT          263 a          203 c          180 g          335 t
ORIGIN      
        1 ttgagccgtt aattaaattg cggtcttccg cccattgttc gatgttttta attagttgtt
       61 gcattgttta gtcctctcat ttctttcatt gcttcatcaa tcgccgtgcg taaatcggca
      121 tttcttgccc aatgaaaata ctgctcgtgc ggtttggtat agctagcaat aataaattcg
      181 tccaccaaat cagaatatcg gacatctaat ttgcgttggg cgataaagtc taagcgttcg
      241 gtgtcggtca tttttcctcc tttggtggtt cgggaagtgg ttgccagtgg gtaacaccat
      301 agacaggctg aatacctaag aatccacccg gcttgaacca gctctcgcca ttgaattgag
      361 caatcataat aaaattgttt gttatcaaga cttctttgcg gatttctggc aatctgtctt
      421 tgactgaaat ccagccgttg ttttctacaa gtgttggtgg ttcaataact tgttcagctt
      481 ccccaaataa ctctgattct ctttcttcat cggttagtgg gcggatatct gattttgctc
      541 tacctaaaac aacaccataa actgcatagg gtaaatcata ggcttcatag ctttcgtgat
      601 catccatgtc atccgcaaac tcataggctt cagtagcacc atttaaacag ctttgttttg
      661 cttgctctaa ggtttcgtgc agatttagga tatgtatatc atttgataca tccaccgaaa
      721 aaaatttgtc ttcattcatt ttctttctcc aaaataccaa tagttgagag aataataagc
      781 atactatctc atgctattct taagtgcatc taaccacgct ccagcatctt cggctgaagc
      841 gaaatataac ccttgatcaa atagtttttc tatataagaa tgtgtaggga aatttgattt
      901 tatcacattg aaattatcgc caataaacca cattccatct cttggttctt ttaatggaca
      961 aggaagagtg agagttactg t
//
LOCUS       DANLTI010000237          979 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.244, whole genome shotgun sequence.
ACCESSION   DANLTI010000237 DANLTI010000000
VERSION     DANLTI010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.244"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            134..820
                     /locus_tag="PXB09_002692"
     CDS             134..820
                     /locus_tag="PXB09_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234738.1"
                     /translation="MAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGT
                     TISGGTISGTTITGGIIKGARIEGLTGKFTGELEINQLIGGNIYEAKTWTSKATGKSK
                     TYSETKNSFALSDTYYEYVCQFVLPATKATRTLYVVHTPTGESKSETFYGSGSNRTPT
                     TITLPSVIDISNTISPNVSNPFNDSGAILIANTQYVVTCRAWCAGRGRSAKVNFRAII
                     SSTNGSSYQL"
BASE COUNT          344 a          178 c          202 g          255 t
ORIGIN      
        1 cccttggcaa aatgccggtg taaccgctat ccacggtggc tcaatagtta ctaataccgt
       61 tactgctcaa caaattgcag caaataccat taccgccaac gaaatcgcag ccggcacgat
      121 tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtgg ggagttcgat
      181 cactgcggat aagctaaatg taaacaattt agcggcaata tcggcaaatc ttggtaaggt
      241 aactgctggt acaattacag ggacgacaat tagtggtggg acaatttcag gtacaacaat
      301 tacaggggga ataattaaag gagcaagaat tgagggatta acaggtaaat ttactggaga
      361 acttgaaatc aaccaattga tcggaggtaa tatctatgag gctaaaactt ggacatcaaa
      421 agcaacaggg aaaagtaaaa catattcaga aacgaaaaac agttttgcat taagtgatac
      481 atattatgag tatgtatgtc aatttgtact acctgctaca aaagcgacga gaacattgta
      541 tgttgtccac actccaacag gagagagtaa aagcgaaact ttttatggta gtggtagtaa
      601 tcggacaccg acaacaatta cattaccgtc tgtaattgat attagcaata ctatttcacc
      661 taatgtatct aacccattta atgattctgg ggcaatactc attgctaata ctcaatatgt
      721 agtaacgtgt cgtgcgtggt gtgcagggcg tgggagaagt gctaaagtga attttcgagc
      781 aattatatca tctacaaatg gttcatctta tcaattatag gaggcaaata tgaaaaaaat
      841 tatactactt acaacaatta tggtttcagc ttgtacaact caatataagc aagactatac
      901 aacaaaacca accttttgtt atcaactagc ccctcaagag caattaccgg ggaaaaactg
      961 tattggctca ggagggcat
//
LOCUS       DANLTI010000238          964 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.245, whole genome shotgun sequence.
ACCESSION   DANLTI010000238 DANLTI010000000
VERSION     DANLTI010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.245"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            223..964
                     /locus_tag="PXB09_002693"
                     /pseudo
     CDS             223..964
                     /locus_tag="PXB09_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524908.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein"
BASE COUNT          343 a          167 c          151 g          303 t
ORIGIN      
        1 gactcctcta atagtccact cttgttccat tttggaacat ttttgtatat tatttcgcct
       61 tttctttctc attgtgttct atgtaggcaa cagcattttt tgcaaagtga tcgacgagaa
      121 cattcattac ttcagtccat tttacaggtc ttcctatctt cattccaact tccatcgcta
      181 atctttctat cttgagtttt ttctctaatt taatattgaa cagagcttta tgaaatggtt
      241 gatatagaac aaacgtcagt tgattggatt gatgtaactt attcagctca tattgattcg
      301 gaatctatcc aaaaacaact tatctctttt ttccaaaaca tccatttagg acaaacacgt
      361 cgtacaagac ataacaaaga atatgacaca acggcagaat ggaattcagg ttcagaacac
      421 cgtattttaa aagtttatct aaaaggtaat gaagttcaaa aaagactaca agaagcccag
      481 cacgacttca aaaaatcacc aagtaaaaag tatctgcaaa actcaattca agtattaagt
      541 aatccaaatc tcattgaatt ttcaaaaaaa tgtgttcgtt ttgaagcaag attaaaacaa
      601 cgttatttag ataaacatca aatcccacgc aatttatttg acttaattaa atatcagaga
      661 gattacgaag agcagggtag aagcctgatt aaagacctat ggcaagacgc attcaaagac
      721 attattaagg ctgtcgggga aagcaatatg aatatttaca acagagatca aattcagcgt
      781 ttattacgga aaaattattt ttcaatcact ccaaaaggaa atatgagcta tgcaaaggct
      841 gatcgtttat tcagctttta taagaattta ctaagtgatg gctatagaga aacgctagat
      901 tctatgccaa gaaacacatt ttggagatat gaaaaggatc ttatggccgt tggtttaact
      961 aaaa
//
LOCUS       DANLTI010000239          949 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.246, whole genome shotgun sequence.
ACCESSION   DANLTI010000239 DANLTI010000000
VERSION     DANLTI010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.246"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..>949)
                     /locus_tag="PXB09_002694"
     CDS             complement(<1..>949)
                     /locus_tag="PXB09_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234739.1"
                     /translation="GHYLCTKVKGVRFFNNIAIGGRNVSAYGATSCSDIFILGNREQG
                     MAVTTVDVEAGVQVEDVQTGECVVANNICSHDIWMSGAKNAIINSNLCRRLRVTSGNP
                     TDTGSNNVEFSNNQAKSIAISKYGSFDNPSLFIDNINFINNILEPSEFNQDVYIDGTI
                     LKQCQFINNRCISKSKQYSVRLARNNPFLNLTFKSNKLSDNPAIISGKQGVIFCDDLS
                     LGVNKHRLRLRFSSPINFTVNQEWQKMPFDRVLNDINGHVDIVSGQFIARTGGTFHLK
                     GKITVTNSSEDVLNLYQLRLLINNEEKERLINQSVSPKNS"
BASE COUNT          294 a          193 c          148 g          314 t
ORIGIN      
        1 tgctgttttt aggtgaaaca ctttgattaa tcagtctttc tttctcttcg ttatttatta
       61 acagcctgag ttgatataaa ttcagcacat cttccgatga atttgtaacc gttattttac
      121 cttttaaatg aaaagtgccg cctgtccttg caataaattg accactgaca atatcaacat
      181 gaccattgat atcatttaac actctgtcaa acggcatttt ttgccattct tgattaacag
      241 taaaattaat cggcgatgaa aatcgcaatc ttaatctgtg cttatttact cctaagctca
      301 aatcatcgca gaaaataaca ccttgcttac ctgatataat cgcaggattg tccgataatt
      361 tattactctt aaatgttaaa tttaagaacg gattattgcg agcaagtctg acagaatatt
      421 gcttagactt gctaatacaa cgattattaa taaattggca ctgttttaaa attgtcccgt
      481 caatatacac atcttgatta aattcactgg gctccaaaat gttattaata aaattgatat
      541 tatcaataaa caatgaagga ttatcgaaag aaccatattt cgatattgca atagattttg
      601 cttgattatt tgaaaattct acattgttgc tgcctgtgtc agtcggatta cctgatgtga
      661 cacgcaagcg acggcagagg ttgctgttga taatggcatt tttagcacca gacatccaaa
      721 tatcgtggct gcaaatatta ttcgctacca cacattcgcc agtttgtaca tcttccactt
      781 gtacgcccgc ttccacatca actgtcgtca ctgccatccc ctgttcacga ttacccaaaa
      841 tgaaaatatc agagcaagat gttgcaccgt aagctgatac attgcgacct ccaattgcta
      901 tattgttaaa aaatcgcaca cctttaactt tggtgcagag ataatgtcc
//
LOCUS       DANLTI010000240          942 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.247, whole genome shotgun sequence.
ACCESSION   DANLTI010000240 DANLTI010000000
VERSION     DANLTI010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.247"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>942
                     /locus_tag="PXB09_002695"
     CDS             <1..>942
                     /locus_tag="PXB09_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5234740.1"
                     /translation="ANQLIPKSAFDWLGQYPEVISSLMYAMSGHNDKAGLLSEIVQKA
                     DQHSVTLAIGGDVNKLVQRPVNSLPKQIVLALRYLLEQKIKLNTPKGPADGWFTEDGL
                     WLVSKTAADNIRTYLLGQGISVPKDNPKLFDEMQSLGIVEESPSGGAIWSCRIQADSG
                     WTPATTFTLLRVKPEVAWENINDRPAYFAGKVKVIEQITEEVNAEVQPPLVEETTKIS
                     LLPSKQSEAIIPSEETEISKAITSSDNATSAEVIINNENDLTSFVLDMFAPTETIEQN
                     ISVISSNKEQQIVMTTLTEQEKVPPKKVKLEKSKKKNL"
BASE COUNT          306 a          178 c          215 g          243 t
ORIGIN      
        1 gcaaatcagc tcattcccaa gtctgcgttt gattggctgg gacagtatcc agaagtcatt
       61 tcttcactga tgtatgcaat gtctgggcat aacgataaag ccgggctttt atctgagatc
      121 gtgcagaaag ccgatcagca tagtgttacg ctagcaatcg gtggcgatgt gaataagctg
      181 gtacagcgac cagttaattc attgccgaag caaattgtgc tggctctacg ttatttactg
      241 gagcagaaaa tcaaattaaa tacgccaaaa ggaccagcag acggctggtt taccgaagat
      301 gggctgtggc tggtaagtaa aactgctgcc gataatatcc gaacttattt actgggacag
      361 gggatttccg tgcctaaaga taatccaaaa ctgtttgatg aaatgcaatc tcttggtatt
      421 gtggaagagt ctccttccgg cggtgcaatt tggagctgcc gtatccaagc cgattccggt
      481 tggacaccgg cgacaacatt tacgctatta cgagttaaac cggaggttgc ttgggagaat
      541 atcaacgata gaccggcgta ttttgccgga aaagtcaaag tgattgaaca gataactgaa
      601 gaggtcaatg cagaggttca gcctccatta gttgaagaaa ccactaaaat ttctctatta
      661 ccgagcaagc aatcggaggc tattattccg tctgaggaaa cggaaatatc gaaggcaatt
      721 acaagttcag acaatgcaac atctgcggaa gtaatcataa ataatgaaaa tgatttaact
      781 tcttttgtat tggatatgtt tgctcctaca gagacaattg agcaaaatat ttctgtcatt
      841 tcttcaaata aagagcagca aatcgtaatg acaacactta cggaacaaga aaaagttccg
      901 ccgaaaaaag ttaaattaga gaaaagtaag aaaaaaaatc tt
//
LOCUS       DANLTI010000241          937 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.248, whole genome shotgun sequence.
ACCESSION   DANLTI010000241 DANLTI010000000
VERSION     DANLTI010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.248"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..687
                     /locus_tag="PXB09_002696"
     CDS             <1..687
                     /locus_tag="PXB09_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5234741.1"
                     /translation="ELLTELLSLEGFKMKVVHNGLEGLNELESNQYDLVLLDVMMPVL
                     SGVKTLKRIRQKYSLPVLMLSARDDQIDRILGLELGADDYVPKPFNNRELVARMKAIL
                     RRTTSRPASTDHSEQNYTENISKSLQFAGVELHSGRQQAYYQGCDLDLTGTEFALLQM
                     LMRNSGEILSRELLSLKILGKNLTPYDRAIDMHISNLRKKLPEREDGLPWFKTLRGRG
                     YLLCRRSNLI"
     gene            complement(722..>937)
                     /locus_tag="PXB09_002697"
     CDS             complement(722..>937)
                     /locus_tag="PXB09_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5234742.1"
                     /translation="FHKTILQEFYQVAFRKKIYTDLTTLQADLDEWLMYYNHHRTHQG
                     KMCCGRTPMATLLDGKRIWVEKNLSSN"
BASE COUNT          304 a          154 c          174 g          305 t
ORIGIN      
        1 gagctactaa ctgaattact ttcattagaa ggatttaaaa tgaaagttgt gcataatggt
       61 ttagaaggct taaatgagtt agagtctaat caatatgatt tagtattact agatgtgatg
      121 atgccggtat taagtggcgt gaaaacatta aaacgtatac gacaaaaata ctcattaccc
      181 gttttaatgt taagtgcaag agatgatcaa attgatagaa tcttaggttt agaattaggg
      241 gctgacgatt atgtaccgaa accttttaat aatcgtgaac tagtcgctag aatgaaagcg
      301 atacttcgaa gaacaacctc tcgcccagct tcaacagacc attctgaaca gaattatact
      361 gaaaacatct ctaaatcatt acaatttgcc ggagttgaat tacattcagg acgtcagcag
      421 gcttattatc aaggatgtga tcttgattta acggggactg aatttgcatt attacaaatg
      481 ttaatgcgaa actcagggga gattttgtcc agagaattat tgagtttaaa aattttaggg
      541 aaaaatttaa cgccttatga tcgtgcaatt gatatgcata tttctaatct tcgtaaaaaa
      601 ttacccgaac gggaagatgg attaccttgg tttaaaacct taagaggtcg gggttactta
      661 ttatgtagaa gatcaaacct aatctgacag tcccccgttt taaattaccg tgtctgtcag
      721 attaatttga gcttaaattc ttttccaccc aaatccgttt tccatcaagt aaggttgcca
      781 tcggtgttct gccacagcac atttttcctt gatgtgttcg atggtgatta taatacatta
      841 accactcatc taaatccgct tgtaatgtcg ttaaatccgt ataaattttc ttcctaaatg
      901 ccacttggta aaattcttgt aagattgttt tatggaa
//
LOCUS       DANLTI010000242          930 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.249, whole genome shotgun sequence.
ACCESSION   DANLTI010000242 DANLTI010000000
VERSION     DANLTI010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.249"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            93..>930
                     /locus_tag="PXB09_002698"
     CDS             93..>930
                     /locus_tag="PXB09_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5234743.1"
                     /translation="MSNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFFNEVI
                     KESSWNWNNELQEKYYDFMKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDA
                     GRELLKVTSSGDFETNNVFNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVVKCLTELE
                     FLSYDEFTYFVPLIRDDESAKQIISDIKLYREGKILPEEIIYKRLMQMENYKLAQEEF
                     IASDVDENLICLVGMNRKSRNYDKPYYKLYENLKKVFLDGENIYESLLNSAKNINQKP
                     GIL"
BASE COUNT          364 a          103 c          182 g          281 t
ORIGIN      
        1 attcaaatag taactatcat agaaaagata aagtcagtat atctgaagaa gttttaatta
       61 ctaactatcc tgtgaattgg aggaataagt aaatgtctaa taaaagtatt ccatatcaaa
      121 gtttttgttg ggttatagga actacaagtt ttagaactgc aaaactaaat ttaaaaatcg
      181 aggcacagtt gttgcttctt gatgagtttt ttaatgaggt cataaaggaa tcaagttgga
      241 actggaacaa tgaattgcaa gaaaaatatt atgattttat gaaagataga gctttcctaa
      301 caggagaagc aaaaagaaaa gacaaagatg ccagagaaaa aacatcagga ttggttgata
      361 ttggtttaat tacagaagat agattgatta cggatgcagg aagagaactc cttaaagtaa
      421 caagtagtgg ggattttgaa accaataatg tgtttaatat taatagagat agctttatct
      481 atctaaaaca gcttcttaaa acgagtatag atgtaagtgg tagtatcgtt agaccgttta
      541 ttgcggttgt aaagtgcctg acggaacttg agtttttaag ttatgacgag tttacttatt
      601 ttgttccgct aattagagat gacgaaagtg caaaacaaat catatcggat attaaattat
      661 atcgagaagg taaaatttta ccggaagaaa taatttataa gaggcttatg caaatggaaa
      721 actacaaact tgcacaagaa gaatttatag cctctgatgt tgatgaaaat ctaatatgtt
      781 tagtgggaat gaatcgtaaa agcagaaact atgacaagcc gtactataaa ttgtatgaga
      841 atttaaagaa ggtatttctt gatggcgaaa acatttatga atcgctatta aattctgcaa
      901 agaatataaa tcaaaaacct ggaatattgt
//
LOCUS       DANLTI010000243          921 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.250, whole genome shotgun sequence.
ACCESSION   DANLTI010000243 DANLTI010000000
VERSION     DANLTI010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.250"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            40..666
                     /locus_tag="PXB09_002699"
     CDS             40..666
                     /locus_tag="PXB09_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5234744.1"
                     /translation="MTKIKFYGNLKKFGSEFSLEVKDTAEAIRALCTQISGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFNFVLGAALIGAA
                     FFTGGASIAAWGAGAKMMGMLGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSNL
                     NNLVTQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            715..>921
                     /locus_tag="PXB09_002700"
     CDS             715..>921
                     /locus_tag="PXB09_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234745.1"
                     /translation="MNLTKAESNLNAKITEEKKARVDADKVNADKLTDITSRVANAES
                     TITNFQSTKANKSEVASLAQSSLQA"
BASE COUNT          304 a          172 c          209 g          236 t
ORIGIN      
        1 aaatcccctt tattttggct ataattgtaa tggtgagtca tgactaaaat taaattttac
       61 ggcaatttaa aaaaatttgg tagtgaattt agcttagaag ttaaagatac tgccgaagct
      121 atccgagcct tatgtacaca gattagcgga ttgcgtgagg cattacgaga cggtgtttat
      181 aaagtccgta tcggcaaaca gtatttagac ccgtcagccc ttgaaaaagg gcttttttat
      241 tgtctgaaga aagggcaaac cattcatttt acccctgtta tcaaaggagc gaaaagcggt
      301 ggcgtgttta attttgtttt aggtgcagcc ttgatcggag ccgcattttt tactggcggt
      361 gcttctattg cggcttgggg agctggagca aaaatgatgg gtatgttagg ggcttcgatg
      421 ttactaggag gagtttccca aatgctcacc aaaatgccaa aagcccccac aatgggtaat
      481 gaaacagaaa aagaaagctc aacggctttt tcaaatttaa ataacttggt gactcaaggc
      541 aaacctgtgc cgttggctta tggcttaatt cggaccggct cgcttgtgat atcgcaggga
      601 gttgagacga tcaccattaa agaaaaccaa ccggcaagca acaagaaaac aggctttaga
      661 aaataaggga taattaccga ttcagcacaa gcacagcaac ttaatcagtt atctgtgaac
      721 ttgaccaaag cagagagcaa tttaaatgcc aaaatcacgg aagaaaaaaa agctcgtgtt
      781 gatgcagata aagtgaatgc agataaactc acagacataa caagccgtgt tgcaaatgcg
      841 gaatcaacta ttaccaattt ccaatcaacc aaagcgaata aaagtgaggt tgcgagcctt
      901 gcacaaagtt cgttgcaggc a
//
LOCUS       DANLTI010000244          903 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.251, whole genome shotgun sequence.
ACCESSION   DANLTI010000244 DANLTI010000000
VERSION     DANLTI010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.251"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            6..740
                     /locus_tag="PXB09_002701"
     CDS             6..740
                     /locus_tag="PXB09_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5234746.1"
                     /translation="MARSSYFARLAEWTLLEHLLVKQPENISVCSFGQSFGTSGRLDA
                     EYYQPKFASLFAQLANFKTMKLGEIVNLQKSVEPGSEAYQTEGIPFVRVSDLSKFGIS
                     QTDKYLHPKDFGNVVRPKKDSILLTKDGTVGIAYRVPQDLNVITSGAIVHLELKTDEV
                     LPDYLALALNSPAVQLQAERDAGGSIIQHWKPSEILDVVIPVLPKNIQQTISDKVQQS
                     FVLRVESEVLLEKAKILVEQEIENMR"
BASE COUNT          311 a          145 c          178 g          269 t
ORIGIN      
        1 gtttattggc gagatcttct tattttgcac gtttagcaga atggacttta ttagaacatt
       61 tacttgtcaa acagcctgaa aatatttcgg tatgttcatt cggtcaatca ttcggtacaa
      121 gcggtcgttt agatgcagaa tattaccaac ctaaatttgc aagcttattt gcacaattag
      181 ccaatttcaa aacgatgaaa ttaggtgaga ttgttaattt acaaaaatcg gtagaaccgg
      241 gctcggaagc ttatcaaaca gagggaatac cctttgtgcg tgtatcggat ttatctaaat
      301 tcggcatcag ccaaacagat aaatacttac atccgaaaga ttttggcaat gttgtaagac
      361 ctaaaaaaga cagtatatta ctgactaaag acggcacagt cggcattgct taccgtgttc
      421 cgcaagattt gaatgtgatt acatcagggg caattgtgca tctagagctt aaaactgacg
      481 aagttttacc cgattatttg gcgttagcat tgaattctcc tgctgtacaa ttacaagcgg
      541 aaagagatgc gggaggctct attatccaac attggaaacc gtctgaaatt ttagatgtag
      601 tgattccggt attacctaaa aatatccagc aaaccattag cgacaaagta caacaaagtt
      661 ttgtattgag agtagaaagt gaagttttac tggaaaaagc taaaatactt gtagaacaag
      721 aaatagaaaa tatgaggtaa taatgcctaa tcataatcaa gatttgaaaa aagagtggtt
      781 taataaagca aggatagatt accactctcc ttttttaatg ttatggctca gttgtaatag
      841 ctggtataac ttccattatt ccttaggtaa ggatagaaca catattgata gaataaaatc
      901 gga
//
LOCUS       DANLTI010000245          892 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.252, whole genome shotgun sequence.
ACCESSION   DANLTI010000245 DANLTI010000000
VERSION     DANLTI010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.252"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..259
                     /locus_tag="PXB09_002702"
     CDS             <1..259
                     /locus_tag="PXB09_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5234747.1"
                     /translation="TYRSYDALDVSEFHHERINHSELFAEKQNHINGIENFWNQAKRV
                     LRKYNGINRKNFPLFLKECEFRFNFGTPKEQLKTLRKWCEI"
     gene            265..603
                     /locus_tag="PXB09_002703"
     CDS             265..603
                     /locus_tag="PXB09_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234748.1"
                     /translation="MYYSPKDYLEEYNDLGTIRYKFQEENLYGFLRDGATLVANGIVN
                     EPSVDCFSQEIAQFTGCHIFSSLYIAFNTQRSFKSHWDSRDIFAVQMQGKKRWIIHTP
                     TFKKTIVYAS"
     gene            593..>892
                     /locus_tag="PXB09_002704"
     CDS             593..>892
                     /locus_tag="PXB09_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDL5234749.1"
                     /translation="MHRSKDMPEYAPNLDDVYMDIVLEAGDVLYLPRGWWHDPIPVGE
                     ETVHLAVGIFPAYTHNYLTWVSQNMVEKEIARASLSHYESDKELIAQLAEQTAEYI"
BASE COUNT          291 a          142 c          175 g          284 t
ORIGIN      
        1 tacctatcgt agctatgatg cccttgatgt gagcgaattt catcacgagc gaatcaacca
       61 ttccgaactg tttgcggaga aacaaaacca tatcaatggc attgaaaatt tttggaatca
      121 agcgaagcga gtactccgaa aatataacgg aattaaccga aaaaatttcc ctttattctt
      181 gaaggaatgt gaatttcggt ttaactttgg tacaccaaaa gaacagctca aaacgttgcg
      241 aaaatggtgt gagatttagg gctaatctac tacagcccca aagattattt agaagaatat
      301 aatgatctag gtactattcg ttataaattt caagaagaaa atttatatgg ttttttaaga
      361 gatggggcaa cattagtcgc aaatggtatt gtaaatgaac caagtgttga ttgcttctct
      421 caagagatag ctcaatttac aggctgtcat attttttcaa gtttatatat tgcgtttaat
      481 actcaaagat cttttaaaag ccattgggat agtcgtgata tttttgcagt tcaaatgcag
      541 ggtaaaaagc gttggattat tcacactcca acatttaaaa aaaccattgt ttatgcatcg
      601 tagtaaagat atgcctgaat atgctcctaa tcttgatgat gtatatatgg atattgtatt
      661 agaagctgga gatgttcttt atttacctcg tggctggtgg cacgatccta ttcctgttgg
      721 agaagaaact gtgcatttag ctgtaggcat ttttcctgct tatactcata actatctgac
      781 ttgggtatct caaaatatgg ttgagaaaga aattgcccga gcttctttat cgcattatga
      841 gtcagataaa gagttgatag cacagttggc agaacaaaca gcagaatata tt
//
LOCUS       DANLTI010000246          879 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.253, whole genome shotgun sequence.
ACCESSION   DANLTI010000246 DANLTI010000000
VERSION     DANLTI010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.253"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            32..>879
                     /gene="msrA"
                     /locus_tag="PXB09_002705"
     CDS             32..>879
                     /gene="msrA"
                     /locus_tag="PXB09_002705"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5234750.1"
                     /translation="MKYNQLLLCLVSAIFTTSSIANITTPNEMRSENLQDIYLAGGCF
                     WGIEAYMEKIYGVKEATSGYANGKTEQTAYRIIGQTDHAETVHVTYDANKISLEKLLQ
                     YYFKVIDPTSKNKQGNDIGRQYRTGIYYQNEQDKQIILKEIQAQQAKYKQKIQVQVEP
                     LKHYILAEEYHQDYLKKNPNGYCHIDLNQANSIIIDPKDYPKPSDATLKMKLTPLQYS
                     VTQRKNTERSFSNEYWDNTAPGIYVDITTGEPLFSSLDKYDSGCGWPSFTKPIINEVV
                     NYTEDN"
BASE COUNT          333 a          161 c          152 g          233 t
ORIGIN      
        1 taaaattaca taagttataa aggagaactg gatgaaatac aatcaactgt tactatgttt
       61 ggtgtctgct atctttacca cctcctcaat agcaaacatc acaaccccta acgagatgcg
      121 atctgaaaac ttacaggata tttacttggc aggaggatgt ttctggggca ttgaagccta
      181 tatggaaaaa atatatggcg taaaagaggc tacatcgggc tatgccaatg gcaaaactga
      241 gcaaactgct taccgaatta tcgggcaaac cgatcatgca gaaacagttc acgtgaccta
      301 tgatgctaat aaaatttctt tagaaaagct gttgcaatat tactttaaag taattgatcc
      361 aaccagtaaa aataaacaag gtaatgatat tggccgccaa tatcggacag gtatttatta
      421 tcagaatgag caagataaac aaattatttt aaaagaaata caagctcaac aagcaaaata
      481 caaacaaaaa atacaagtgc aagtagaacc attaaaacat tatattttgg cagaagagta
      541 tcatcaggat tacctaaaga aaaatccaaa tggctactgc catattgatt taaaccaagc
      601 caacagcatt attatcgatc cgaaagatta tcctaaacct agtgatgcaa cattaaaaat
      661 gaaattaacg cctttgcaat atagcgttac ccaacgtaaa aatactgagc gttcattcag
      721 caatgaatat tgggataata ccgcaccggg catttatgtt gatataacta caggagagcc
      781 tcttttttca tctctcgata aatatgactc cggctgtggc tggccaagtt ttaccaaacc
      841 aattatcaat gaggttgtta actataccga agataatag
//
LOCUS       DANLTI010000247          856 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.254, whole genome shotgun sequence.
ACCESSION   DANLTI010000247 DANLTI010000000
VERSION     DANLTI010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.254"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..749
                     /locus_tag="PXB09_002706"
     CDS             <1..749
                     /locus_tag="PXB09_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5234751.1"
                     /translation="ATVEVGIVTGANDFFLVNDHIVSKYKLDRFVYPMFGKSQHCKGI
                     IYDNEQHFENKEKNLPTNFIYLEDNESNLPLLVQTYIKEGEDAEYHKRYKCKIRKPWY
                     KVPSVYSTNIGMLKRSHEAPKLILNKLGAYTTDTAYRIKSNKFQDEILVCCFLNPLTM
                     ILSELNGRFYGGGVLELVPSEIRNLYIPIIENIDFNIEELNEEVKAGNIENVIRNNGE
                     KILTNLGFSQEDNAMLMSIWKKLKNNRLRR"
BASE COUNT          328 a           97 c          157 g          274 t
ORIGIN      
        1 tagcaacggt ggaagttggt atagttacgg gagccaatga ttttttctta gttaatgatc
       61 atattgttag caagtataag ttagatcggt ttgtttatcc tatgttcgga aaaagtcagc
      121 attgcaaagg aatcatatac gataatgaac aacattttga aaataaagaa aaaaatttgc
      181 caactaactt tatttattta gaagataatg agagtaatct tcctttactt gtacaaactt
      241 atataaaaga aggtgaggat gcggagtatc acaaaagata taaatgcaaa ataagaaaac
      301 catggtataa agttccatcg gtttattcaa ctaacatagg aatgctgaaa agaagtcatg
      361 aagcaccaaa actaatattg aataaattgg gggcttatac taccgatact gcgtatcgta
      421 taaagtcaaa taaatttcaa gatgagattc ttgtgtgctg tttcctaaat ccattaacta
      481 tgattttatc tgagttaaat ggaaggtttt atggtggagg cgtattagaa ttagttcctt
      541 ctgaaattag aaatctatat attccaataa ttgagaatat tgattttaat atagaagaat
      601 taaatgaaga agttaaagct ggaaatatag agaatgtcat aagaaacaat ggtgaaaaaa
      661 ttttaacaaa tttaggcttt tctcaagaag ataatgccat gttaatgagt atatggaaaa
      721 agctaaaaaa taacaggtta agaagatagc ttgaaaaggt tgtgtggttt atacatcaca
      781 caacctttta gaattaacta tatagatcct ctatagatgg tataatgtca tctaattcgt
      841 ttaggttgta tagttc
//
LOCUS       DANLTI010000248          849 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.255, whole genome shotgun sequence.
ACCESSION   DANLTI010000248 DANLTI010000000
VERSION     DANLTI010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.255"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>849
                     /locus_tag="PXB09_002707"
     CDS             <1..>849
                     /locus_tag="PXB09_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5234752.1"
                     /translation="QSSYGKIQINRNARPTGQYNLNNEELGAIKVPLIDLETQKQVDK
                     IIKQSNDFVQKSTQSYQEAETLLLENLGLRAFQADSNPVNVKSLKESFLQTGRLDAEY
                     YQTKYEQYWNLIQSQDYVFIRDEYLHITQKPDWTKPMYQYIEIGDVNIGDGSYQTNWI
                     ETQELPANAKTQAQTGDILISTVRPYRGAVTIIGENDQDLVVSGAFTVLRRKENSVFN
                     NEVLKVLLRSELYKDWLLQFNVGTSYPVIKDNDILNLPIPKISGEIQEKIAEYIRQSN
                     DLRQQAQ"
BASE COUNT          324 a          129 c          150 g          246 t
ORIGIN      
        1 caaagttctt atggaaaaat ccaaattaac cggaatgcac gcccaacagg acaatacaat
       61 ctgaataatg aggagcttgg tgcgattaaa gtccccttaa ttgatctaga aacacaaaag
      121 caggtagata aaatcattaa gcaaagtaat gattttgtac aaaaatcaac acaaagttac
      181 caagaagctg aaactttatt attagaaaat ctcggtttga gagcttttca agctgatagc
      241 aatcctgtaa atgttaaatc cttaaaagag agtttcttac aaacaggacg attagatgca
      301 gagtattatc aaactaaata tgagcaatac tggaatttaa ttcaatcgca agattatgtt
      361 tttattcgtg atgaatattt acatatcacc caaaaacctg attggacaaa accgatgtat
      421 caatatattg aaattggtga tgttaatatt ggtgatggtt catatcaaac gaattggata
      481 gagacacaag aattacctgc taatgctaaa actcaagccc aaacaggtga tattttaatt
      541 tcaaccgttc gcccttatcg tggtgcagta acaattatcg gtgaaaatga tcaagattta
      601 gttgttagtg gtgcgtttac agtattacgc agaaaggaaa actctgtttt taataatgaa
      661 gttttaaagg tgctattacg gtcagaacta tataaagatt ggttactaca atttaatgta
      721 ggtacgagtt atcctgtaat taaagataac gatattttga atttaccaat tcctaaaata
      781 agtggagaaa tccaagaaaa aattgctgaa tatatccgcc aaagcaacga tttaaggcag
      841 caagcacaa
//
LOCUS       DANLTI010000249          785 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.256, whole genome shotgun sequence.
ACCESSION   DANLTI010000249 DANLTI010000000
VERSION     DANLTI010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.256"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..736
                     /locus_tag="PXB09_002708"
     CDS             <1..736
                     /locus_tag="PXB09_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5234753.1"
                     /translation="ELDVLEVNHNKFKAKIALQGAQLLSWQPYNAEQDVLWLSEIEPF
                     RIGSAIRGGIPICYPWFGSIKEPAHGTARIQEWRLVEHTCSDENVGLVFALENKAKME
                     MMLGETCELYFTHLDPEPAQLALHSYFNIGDIEKVEVQGLPTRCFDKLTDQEVEVPSP
                     RKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETVLWNPWHNTVSAMTETAYQN
                     MVCVETARINTLLQQNETLGVRVLVR"
BASE COUNT          250 a          129 c          181 g          225 t
ORIGIN      
        1 tgaattagac gtgctagaag ttaatcacaa taaattcaaa gctaaaattg cattacaagg
       61 agcacaattg ctaagttggc agccgtataa tgcagagcaa gatgtgctgt ggttaagtga
      121 gatagaaccg tttagaattg gctctgcgat tcgtggcggt ataccaattt gttatccgtg
      181 gttcggttca ataaaagagc ctgcccacgg cacagctcgc attcaagaat ggcgtttagt
      241 tgagcatact tgttctgatg aaaatgtcgg tttggtattt gccttagaga ataaagcgaa
      301 aatggaaatg atgttaggcg aaacttgtga gttatatttt acccatttag atccagaacc
      361 agcacaactg gcattgcact cttattttaa tattggtgat attgaaaaag tggaagtgca
      421 aggcttgcca actcgctgtt ttgataagct aaccgatcaa gaagttgaag tgccatcacc
      481 tcgcaagata agtgaaaatg tggattgtat ttatccggca caagcggtga attttattca
      541 agattttgca aatcagcgca ccattaaagt tgagcatatt aatgcgaccg aaaccgtact
      601 ttggaatcct tggcataata ccgttagtgc gatgacagaa acggcgtatc aaaatatggt
      661 atgtgtggaa accgctcgga taaatactct acttcaacaa aatgaaacgc taggagtgag
      721 ggttttagtg cgatagtgtt taatgagagc aagcagctga attagtaata ttgtttacaa
      781 attta
//
LOCUS       DANLTI010000250          737 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.257, whole genome shotgun sequence.
ACCESSION   DANLTI010000250 DANLTI010000000
VERSION     DANLTI010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.257"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
BASE COUNT          248 a           94 c          145 g          250 t
ORIGIN      
        1 gaatgaaatg aaagaaccat caattttaca attaagctta gtagttggag ggaattctga
       61 aaataaggct aatcaaccag atcttgtatc ttatggcgtt gcttttgcta cagggtttgc
      121 aagagggggg ctttaggcgg tttatccagt acttctgtta atttagccct tgatttagcg
      181 aggagcctac ctattacaat acatgaaaat tctttaccta gcggtgtaaa agaattaatt
      241 ccatcatctt taccaataaa gcctacgttt ggagttccag gtagaacgaa taataaccaa
      301 tctggctcaa actacgattg tggtgatggt acagattatc aaggctagtg gagatgaaaa
      361 tgaaaattca atttccaatt tcttatcaag aatttcgtga aagttattct gagaaacaac
      421 cacttttaat gaaaggtgct atagagtagc aagatttact ttcttggaag gctatcaatg
      481 aagtattacc tcgttgtgat ttactttctg aagatgcaat taaagtaatg tataaagtaa
      541 gttgaaatac tttaatggag aaagtatggt ggatttttct attttgatat tagttatagt
      601 attgcctgtt atttttgtga aagttataga tgtactgttg cttagtaagt tagatatgag
      661 taaggaaaaa aatgacaaat gccaaataat aatatattta tttataataa ttttacttgg
      721 ggcatataag agctatt
//
LOCUS       DANLTI010000251          735 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.258, whole genome shotgun sequence.
ACCESSION   DANLTI010000251 DANLTI010000000
VERSION     DANLTI010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.258"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..310
                     /locus_tag="PXB09_002709"
     CDS             <1..310
                     /locus_tag="PXB09_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234754.1"
                     /translation="QAVLITNQKVQKDTFSMCGEFSTEIVFSDSKAYSLAVCGKVKGK
                     DIIGNPIESDYIYQRATKDFYFNYNGKKSAYYDPQSDLARLQEVSDSMFNAMQNRYCK
                     "
BASE COUNT          259 a          102 c          134 g          240 t
ORIGIN      
        1 tcaggctgtc ttaattacta atcaaaaagt acaaaaagat actttctcaa tgtgtggtga
       61 attttcgaca gagattgtct tttctgactc taaagcatat agccttgcag tatgtggaaa
      121 ggttaaaggt aaagatatta tcggaaatcc gatagagagc gactatatat accaaagagc
      181 aactaaggat ttttacttta attataatgg caaaaaatca gcttattatg atcctcaatc
      241 tgatcttgca aggcttcaag aggtctcaga ctctatgttt aatgctatgc aaaatagata
      301 ttgtaagtga tgcttgcatt ggtttttaaa tatttaactc aaataattta tgtgttttta
      361 gtttaatagg gcgatttatg gatgtaaagg taattaacgt cttactaatt attctttttt
      421 cagcaattgt aataggttta ttcctttttc aagaatcaag attaagagat ccaaacaacc
      481 attcagtgat atatttagag cagattcaag aaatgtgcag cttagataaa ataggctcat
      541 accagattga ttttgtacga caaagtggga atgagtacaa agagagtatt cttgttaatg
      601 attttgagtt agcaataaaa accgtattat ccacgttaag aagggcaaaa atagatagtg
      661 tgccagtaat atctaacaca cttatttatt atccaccgag ctttctacaa cgcaagaggt
      721 agtcaagaag gaaag
//
LOCUS       DANLTI010000252          716 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.259, whole genome shotgun sequence.
ACCESSION   DANLTI010000252 DANLTI010000000
VERSION     DANLTI010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.259"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..296
                     /locus_tag="PXB09_002710"
     CDS             <1..296
                     /locus_tag="PXB09_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234755.1"
                     /translation="DTRYNKNGQGAVSERNIIDAKNRFKASHPYAKIISCVRGSETYV
                     TRPAKANATTKSVKEKQSQPQESSSLSSMLLGAAVTAGVGFVANKWFSKKDNT"
     gene            324..>716
                     /locus_tag="PXB09_002711"
     CDS             324..>716
                     /locus_tag="PXB09_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234756.1"
                     /translation="MAGLLPPYFKKKNSDHYKDAVKQFGKEQVDEVIAQCDELESWVK
                     EMPTKQLIMYVGCFHTFNKLSQSKAYVQENFPNVLENPFLFQTLSAASHNELKINRGY
                     KFKEKMLDEFYNLIELSEKDDEEYSEEEV"
BASE COUNT          268 a          110 c          133 g          205 t
ORIGIN      
        1 cagataccag atataacaag aatgggcaag gtgctgtttc tgaaagaaat attatagatg
       61 ctaaaaatcg ttttaaagcg agccatccat acgcaaaaat tatttcttgt gttagagggt
      121 ctgagacata tgtaacacgt ccagcaaaag ctaatgctac aacaaaatct gtcaaggaaa
      181 agcaatctca accacaagaa agttcatcgc tcagttcaat gttacttggt gcggctgtaa
      241 ctgctggggt tggttttgta gccaataaat ggtttagcaa aaaagataac acttaattta
      301 tctctaacca atgtggagta aaaatggctg gattattacc accttatttc aaaaagaaaa
      361 atagtgatca ctataaagat gctgtaaaac aatttgggaa agaacaagtt gatgaggtta
      421 tagcacagtg tgatgaactt gaatcttggg taaaagaaat gccaacaaaa caacttatta
      481 tgtatgttgg ttgtttccat acttttaaca aattatctca atctaaagct tatgttcaag
      541 agaactttcc aaacgtactg gaaaacccgt ttcttttcca aacactttcg gcagcgtctc
      601 ataatgaact taaaataaat cgaggatata aattcaaaga aaaaatgctt gatgaattct
      661 ataatcttat agagttgtct gaaaaggatg atgaagaata ttctgaagaa gaggta
//
LOCUS       DANLTI010000253          685 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.260, whole genome shotgun sequence.
ACCESSION   DANLTI010000253 DANLTI010000000
VERSION     DANLTI010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.260"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>685
                     /locus_tag="PXB09_002712"
     CDS             <1..>685
                     /locus_tag="PXB09_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5234757.1"
                     /translation="GDISHHWIETLRPYLENRYSTLRLGYLDSNNLANFNSNGYITNS
                     TYLRYYIEELFEHSDSPYWIYLDCDLVVNGNITDPFTNLDFSFGSIAAIADPYVNKLK
                     NHPYIYKNYFNAGVFYLNAKHFSKQPFIQLTERFKENLPFGDQDILNYCFQYNWIELD
                     RKYNYQTEHLLDDIAQQKISPNYIPHIIHFTGGIKPLEGKFNSSYVENVASLFRFYHN
                     TSWEILTELP"
BASE COUNT          245 a          111 c           97 g          232 t
ORIGIN      
        1 tggcgatatt tctcaccact ggatagaaac attacgcccc tatttagaaa atagatattc
       61 cacattaaga cttggctatt tagattcaaa taatttagca aattttaact ccaacggcta
      121 tattactaat tcaacttacc tacgatatta tattgaagaa ctatttgaac acagcgatag
      181 cccatattgg atttatttag attgcgatct tgtggttaat ggaaatatta cggatccatt
      241 tacaaaccta gatttttctt ttggaagtat tgctgcaatt gctgatcctt atgtaaacaa
      301 actaaaaaat catccctata tttacaaaaa ctatttcaat gctggtgtat tttatctaaa
      361 tgcaaagcat tttagtaagc aaccatttat acagcttact gagagattta aagaaaattt
      421 accatttggg gatcaagata ttcttaatta ctgctttcaa tataattgga ttgagttaga
      481 tcgaaaatat aattatcaga cagaacattt attagatgat attgcccagc aaaaaatttc
      541 gccaaattat attccacata taattcattt tactggagga ataaagccat tagaaggtaa
      601 atttaattca agctacgttg aaaacgttgc aagtttattt cgattttacc acaacacaag
      661 ctgggaaata ttgactgaac ttcca
//
LOCUS       DANLTI010000254          662 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.261, whole genome shotgun sequence.
ACCESSION   DANLTI010000254 DANLTI010000000
VERSION     DANLTI010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.261"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(19..303)
                     /locus_tag="PXB09_002713"
     CDS             complement(19..303)
                     /locus_tag="PXB09_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010128390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234758.1"
                     /translation="MANITLSHITPKHFFETVRLLKMQEHRIYIGVDSIEVRFKQKRF
                     ESKKETDKRLEQLEHFMLFLQEIINSDIPIDLDEFIYTYHRSVRRGFYRR"
     gene            complement(321..482)
                     /locus_tag="PXB09_002714"
     CDS             complement(321..482)
                     /locus_tag="PXB09_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HDL5234759.1"
                     /translation="MEKIENSSNLVLKLSLENQMLILESLEHPKEPNLVMLEALKKYS
                     LYVAKTSNK"
BASE COUNT          206 a          118 c          104 g          234 t
ORIGIN      
        1 cactcctctt tcacatcact aacgtcgata aaaacctctc cttactgacc tgtgataggt
       61 gtatataaac tcatctaaat ctataggaat atctgaatta atgatttctt gtagaaagag
      121 cataaaatgc tctaactgtt ctagtctctt atctgtttcc ttttttgact caaaacgctt
      181 ttgcttaaaa cgaacttcta tcgaatctac accgatgtaa attcgatgtt cctgcatttt
      241 gagtagtcgg acagtttcaa aaaaatgttt aggggtgatg tgagaaaggg ttatatttgc
      301 catagtttag cttgaaaacg ctatttatta cttgttttag caacatacaa agaatacttt
      361 tttaaagcct ctagcattac taaattaggc tctttaggat gttctaagct ctcaagaatt
      421 agcatttgat tttcaagaga aagctttaga acaagatttg aactattctc tattttttcc
      481 attttaatta tctcattaga tgactttcgc ataacaacag gttatgtgta aattctcgtg
      541 cagtgggaca agcccgattg tactgcactc gaattgtaac ataacctgta ggacattatg
      601 cgaaaattaa taatataagt ttttcatcaa tcggcggtat tattgaatac gccatcacat
      661 ct
//
LOCUS       DANLTI010000255          660 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.262, whole genome shotgun sequence.
ACCESSION   DANLTI010000255 DANLTI010000000
VERSION     DANLTI010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.262"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            60..>660
                     /locus_tag="PXB09_002715"
     CDS             60..>660
                     /locus_tag="PXB09_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5234760.1"
                     /translation="MFTEGKIDFDKFQQLFSDNFSTEPDRYMLNWAGKSTAYQTLQTP
                     TSKTLTPCEEESVDFENTQNIFIEGENLDVLKALQKSYFNSVKMIYIDPPYNTGNDFI
                     YNDSFADTKADYAEKVGDVDEHGKLKRAFVRNSKENGHYHSNWLNMMLPRLHLAKNLL
                     RDDGVIFISIDDNEQAQLKLLCDEVFGEENFVAILSVENN"
BASE COUNT          217 a          129 c          126 g          188 t
ORIGIN      
        1 ttgccaactt ttcgcttaaa gatcaacaac tttctcaatt aaaatccctt ttacctgaaa
       61 ttttcaccga aggtaaaatc gacttcgaca aattccaaca acttttttcg gataattttt
      121 ccaccgaacc tgaccgctat atgctcaact gggcaggaaa atcaacagcc tatcaaacct
      181 tacaaacccc aaccagcaaa acgctcactc cttgcgagga agagagtgtg gattttgaaa
      241 atacgcagaa tatctttatt gagggtgaaa atttagatgt attaaaagcc ctgcaaaaat
      301 cctacttcaa ttcggtcaaa atgatttata tcgatccgcc atacaataca ggcaacgatt
      361 ttatttataa cgacagtttt gccgatacca aagcagatta tgcggagaaa gtgggcgacg
      421 ttgatgaaca cggcaaattg aaacgagcct ttgttcgtaa cagcaaagaa aatgggcatt
      481 atcacagtaa ctggctgaat atgatgttgc ctcgtttgca tctcgcaaaa aatttactgc
      541 gtgatgacgg ggtgattttt atttcaattg atgataacga acaggcacag ctgaaattgc
      601 tttgtgatga agtgtttggg gaggagaatt ttgttgccat attatcagtt gaaaataatc
//
LOCUS       DANLTI010000256          648 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.263, whole genome shotgun sequence.
ACCESSION   DANLTI010000256 DANLTI010000000
VERSION     DANLTI010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.263"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            321..>648
                     /locus_tag="PXB09_002716"
     CDS             321..>648
                     /locus_tag="PXB09_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDL5234761.1"
                     /translation="MEGEYKLKADVTIYHDTPYTKVLFGSTYIEILDDDQYYFSILEK
                     RRWKLENLPDELVDVLKEYNLFVKTYIHEYENTELEKNIYLIESLIDSKSHKTPIDIQ
                     KQLSSTK"
BASE COUNT          217 a           98 c          107 g          226 t
ORIGIN      
        1 tcactttcat ttcgtaggct caaattagac ctactacgcc gatataaaaa gttggtcttt
       61 ttatatcaaa gctaagctct taacaacgag tagtagattc tctaatatgt ttagctgtaa
      121 ctttcattgg cttttgttgc gctgtagtgt ttttcatatt gttctccaga ttttgtgagt
      181 aattagtaag accttttctt ttgaaaagga ccgagctttc aaagtggtct gattacctat
      241 tgagcaatca gcttgctttt caagccccat gtcattatat cataaccatt gtttttagtc
      301 aataccattt tggggaatgc atggaaggcg agtacaaatt gaaggctgat gtcacgatct
      361 atcatgatac gccttataca aaagttctct ttggaagtac atatattgag attttagacg
      421 atgaccagta ttacttttcg attttagaaa aacgaagatg gaagttagaa aatttacctg
      481 atgaattagt tgatgtacta aaagagtata atctttttgt taaaacgtat attcatgaat
      541 atgagaatac agaattagaa aaaaatatat acttaattga gagtttaatt gattcaaaat
      601 ctcataaaac accaatagat attcaaaaac aactatcgtc tactaaaa
//
LOCUS       DANLTI010000257          646 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.264, whole genome shotgun sequence.
ACCESSION   DANLTI010000257 DANLTI010000000
VERSION     DANLTI010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.264"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..234
                     /locus_tag="PXB09_002717"
     CDS             <1..234
                     /locus_tag="PXB09_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234762.1"
                     /translation="GSSITADKLNVNNLAAISANLGAITAGSININNRFKVSNAGVVE
                     MRANSGNVGMVMNNNSIIVYDEQGRVRVKMGKL"
     gene            231..>646
                     /locus_tag="PXB09_002718"
     CDS             231..>646
                     /locus_tag="PXB09_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234763.1"
                     /translation="MILIGILCIIALAVLGLLFYFHKKKRKKVNKGVNMAEYGIQTFD
                     TANVSTFSTNERLFKYIGTKNIKYGKFSFTVTEKYEGQLVFIISMLHSVHRKQATGYK
                     TNIPNLIHLENVSINDKTISGEVVCIFPFSLPADDS"
BASE COUNT          232 a           81 c          125 g          208 t
ORIGIN      
        1 gggagttcga tcactgcgga taagctaaat gtaaacaatt tagcggcaat atcagcgaat
       61 ctcggagcta ttacagctgg ttctattaat atcaataata gattcaaggt aagtaatgct
      121 ggagtagtcg aaatgcgagc caatagtgga aatgttggta tggtaatgaa taacaatagt
      181 attattgttt atgatgaaca aggtagggtt agagtaaaaa tggggaaatt atgattctaa
      241 taggtatttt atgtattatt gcattagcag tcttagggct gcttttttat ttccataaaa
      301 aaaaacgaaa aaaagtaaat aaaggggtaa atatggctga atatggtatt caaacttttg
      361 ataccgctaa tgtctctaca tttagtacca atgagcgatt atttaaatac attggaacta
      421 aaaatattaa gtatggtaaa ttttcattca cggtaacaga aaagtatgaa ggacaacttg
      481 tatttatcat tagtatgtta cattcagttc accgaaaaca agcaacaggt tataaaacga
      541 atattcccaa tcttattcat ttagaaaatg tttcgatcaa cgataaaacg atttcaggag
      601 aagttgtttg tatttttcct tttagtctac cggctgatga ttcaga
//
LOCUS       DANLTI010000258          644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.265, whole genome shotgun sequence.
ACCESSION   DANLTI010000258 DANLTI010000000
VERSION     DANLTI010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.265"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>644
                     /locus_tag="PXB09_002719"
     CDS             <1..>644
                     /locus_tag="PXB09_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5234764.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAKGFGRGLMSAGVGIAAGAAMARQPAKNQMEFDRQLAMASNTAFSDRDVKGRI
                     EGKKELLAAVQEAVKVGGGTKEDALLTLDTLIASGTMKAETAMSLLPTLQKGAVATGA
                     SSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGNFELADMARWLPQQMAAG"
BASE COUNT          184 a          129 c          190 g          141 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctctcaa
       61 aatgagctac gccgtgcctc agaagccact aagcaacggg tgcgagagct gaatgcagaa
      121 ttgggtaaga caagctttgg ggataaggct aaaggatttg ggcgtggttt gatgagtgcc
      181 ggtgtcggta ttgcagcagg tgctgcaatg gctcgtcagc cagccaagaa ccaaatggag
      241 tttgaccgac agttagcgat ggcatcaaac actgcctttt ccgaccgtga tgttaaaggg
      301 cgtattgagg gcaagaaaga gttattagca gcggtgcaag aggcggttaa ggttgggggt
      361 ggaacaaaag aagatgctct tttaactctt gatacgctaa ttgcctcagg aacgatgaag
      421 gctgaaactg caatgagcct attaccaacc ttgcagaaag gtgctgtagc aacaggtgca
      481 agctccgagg atatggcaaa aattgcgatc tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg ggcgggcatt ggatatggca gttgcagccg ggcaagcagg taactttgag
      601 cttgcagata tggctcgctg gctaccacaa caaatggccg cagg
//
LOCUS       DANLTI010000259          643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.266, whole genome shotgun sequence.
ACCESSION   DANLTI010000259 DANLTI010000000
VERSION     DANLTI010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.266"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..493
                     /locus_tag="PXB09_002720"
     CDS             <1..493
                     /locus_tag="PXB09_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234765.1"
                     /translation="ARPLNTLEVKGLTVVDDSQKPLFSEVNQALYHGLSPIEVVASRV
                     QITRAITTYTKNVTNTDDPSYLDLTTIRTLDYVRKAIQTRQRLRFPRAKNSHRIVAKV
                     RSEILDVLYQLEGEEVIENVEAWKNRLLVVRNQDPTYLDLEIPADVVNGLHVIRNKIT
                     LIL"
     gene            504..>643
                     /locus_tag="PXB09_002721"
     CDS             504..>643
                     /locus_tag="PXB09_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234766.1"
                     /translation="MSIVYEGSCVLEVDGVEIEITKLDVKTVTGRKLVKTMNSSGRAR
                     GYS"
BASE COUNT          182 a          127 c          160 g          174 t
ORIGIN      
        1 ggctcgcccg ttaaataccc ttgaagttaa aggcttaacg gtcgtagatg actcgcagaa
       61 accgttattt agcgaagtaa accaagcgtt atatcacggt ttaagcccga ttgaggtggt
      121 ggcaagccgt gtgcagatta cccgtgcgat tactacatac accaaaaacg tgacgaatac
      181 tgatgaccca agctatttgg atttaaccac cattcgtacg cttgactatg tgcgtaaggc
      241 aatccaaacc cgtcagcgtt tgcgtttccc tcgtgcgaaa aactcccacc gtattgtggc
      301 aaaagtacgc tcggagattt tagatgtgct ttatcagctt gagggcgaag aggtaatcga
      361 aaatgtggaa gcgtggaaaa atcgcttatt agtggtgcgt aatcaagacc cgacttactt
      421 ggatttagaa atccctgcgg atgtggttaa tggcttgcac gttattcgta acaaaattac
      481 gttaatttta tagggggtgc tagatgtcaa ttgtttatga aggctcttgc gtgcttgagg
      541 tagatggcgt tgagattgaa attaccaaac ttgatgtaaa aaccgtaacc ggtcgcaagc
      601 tggttaaaac gatgaacagt tccggacgtg caagaggtta ttc
//
LOCUS       DANLTI010000260          631 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.267, whole genome shotgun sequence.
ACCESSION   DANLTI010000260 DANLTI010000000
VERSION     DANLTI010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.267"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..301
                     /locus_tag="PXB09_002722"
     CDS             <1..301
                     /locus_tag="PXB09_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HDL5234767.1"
                     /translation="NLFLVTPVIFEMYLQECGQPYDKETINNLQYDFQGLGLHSLKKT
                     MTNGKPDTINFWKCDVIGPRKTSSLTGYLIKNTHLLFGDKMLLNNHCLTLQEEDT"
     gene            341..>631
                     /locus_tag="PXB09_002723"
     CDS             341..>631
                     /locus_tag="PXB09_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HDL5234768.1"
                     /translation="MFFYRHYLRADTKRSYNNIIRIIKKRYPNLNANDVTTDMLIEWR
                     NQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSSNPFNHLFIRESRRKKK"
BASE COUNT          223 a           88 c          110 g          210 t
ORIGIN      
        1 taatttattt ttagtcacac cagttatttt tgaaatgtat ttgcaagaat gtggccaacc
       61 ttatgataag gaaactataa acaatcttca gtatgatttc caggggcttg gtcttcattc
      121 tcttaaaaaa accatgacta atggtaagcc agatacaata aatttttgga agtgtgacgt
      181 gattggtcct agaaagactt cctctttaac aggatatttg ataaaaaata ctcatctctt
      241 atttggggat aaaatgttac taaataacca ctgtttaact ttacaggaag aggacacata
      301 atatggattc taagatttcc ttcgatatat tattggaacg atttttttct atcgtcatta
      361 tttacgggcg gacacgaaac gaagttataa caatattatt cgaattatca aaaagcgtta
      421 tccaaactta aatgcgaatg atgtgactac tgatatgtta attgaatggc gtaatcaagt
      481 tgttggtaat acaattaaag ctgtgacgtg gaataattat gtgagacacc taaaagcatt
      541 atataatttt gcgatagcac aggggctact ttgcatgagt agtaatccat ttaatcattt
      601 atttattaga gaatctagaa gaaaaaagaa a
//
LOCUS       DANLTI010000261          614 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.268, whole genome shotgun sequence.
ACCESSION   DANLTI010000261 DANLTI010000000
VERSION     DANLTI010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.268"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>614
                     /locus_tag="PXB09_002724"
     CDS             <1..>614
                     /locus_tag="PXB09_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5234769.1"
                     /translation="NTVLNTLQCDYVLFSSEDNYQVIINLKKADYPKNEANFITMTLN
                     KKFGDAKFSGANHYLRCASFFNKKSTNNNEKSVLVDFTNTKTEEDNKCYFDNLLSSYK
                     NNNVKLEPLDIKIIDELGDDKAVIAQKEIQAEIALCKRIFKQLDWSAVDFRIVKRLYR
                     KGFSENEIAVALVRFTDFEDRHCDSHDYLTRTITKAIQNYQQCS"
BASE COUNT          244 a           96 c           93 g          181 t
ORIGIN      
        1 aacacagttt taaacacact acaatgcgat tatgtgctgt tttcttctga agacaactac
       61 caagtcatca tcaatctaaa aaaagctgat taccccaaaa atgaagcaaa tttcattaca
      121 atgactttaa acaagaaatt tggtgatgca aaattttccg gtgcaaacca ttacttaaga
      181 tgtgccagct tcttcaacaa gaaaagcaca aacaacaatg aaaaatcagt tttagttgat
      241 tttacaaaca caaagacaga agaagacaat aaatgttatt ttgataactt attatctagt
      301 tataaaaata acaatgtaaa acttgagcct ttagacatca aaattattga tgagcttgga
      361 gatgataaag cagttattgc acaaaaagaa attcaagcag aaattgcttt gtgtaaacgt
      421 atattcaaac aattagattg gtctgctgtt gattttagaa ttgttaagcg tctgtacagg
      481 aaaggatttt cagaaaatga aattgctgtt gcacttgtca gatttactga ttttgaagac
      541 agacattgtg attcacatga ttatttgaca agaacaatca caaaagccat tcaaaactat
      601 caacaatgct caaa
//
LOCUS       DANLTI010000262          611 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.269, whole genome shotgun sequence.
ACCESSION   DANLTI010000262 DANLTI010000000
VERSION     DANLTI010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.269"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..355
                     /locus_tag="PXB09_002725"
     CDS             <1..355
                     /locus_tag="PXB09_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234770.1"
                     /translation="RVQKYVEKVNQKNPQALKDLDNISNLKKINENLKKAAKFTGIIS
                     SIKDYYDLAEGFRNGIKSNDWEPFLKTSAQIGASALMSMLVASMITGPTTIGSIIISA
                     AFISIGGYIISLASR"
BASE COUNT          248 a           87 c           94 g          182 t
ORIGIN      
        1 gagggtgcaa aaatatgtcg aaaaagtcaa ccaaaagaat cctcaggcac taaaagatct
       61 cgataacata tccaacttaa aaaaaattaa tgagaattta aaaaaagcag caaaatttac
      121 tggtattatt agcagtatta aggattatta cgatctagca gaagggttta gaaatggcat
      181 aaagtctaat gattgggaac cttttttaaa gacatctgct cagataggtg cttcagcttt
      241 aatgagtatg ttagtagcct caatgataac aggcccaacg acaattggga gtattattat
      301 tagtgctgca tttatttcta tagggggata tattatttca ctagcttccc gttagatagt
      361 ctttgttata ctcaataacc tactatacta cctataggct attgaactat catacatcag
      421 ctctattaac caaaaaaaca aaaaaaaata ttgcaaataa aaataaaatt attgagatag
      481 gtccagagta cataattaac tcatactttt ttttaagttt aatcctaaga gcctgagcta
      541 caaaaggata taaaaataaa ttaaccagca aatataatag agttataaaa taaatgaaaa
      601 atgtatttga a
//
LOCUS       DANLTI010000263          599 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.270, whole genome shotgun sequence.
ACCESSION   DANLTI010000263 DANLTI010000000
VERSION     DANLTI010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.270"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(62..440)
                     /gene="rnpB"
                     /locus_tag="PXB09_002726"
     ncRNA           complement(62..440)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PXB09_002726"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT          160 a          156 c          110 g          173 t
ORIGIN      
        1 tatttacttt cactataaaa taaaaaagcg aacaagttcc ccctgttcgc atttcaagaa
       61 tttagtgagt tggtcgataa gccgagttct gtcgtggaca atcattcctc tagacgtaca
      121 tttacacata cgctcaagca acctacccga actctcagcg ggccaccgat tgagttccta
      181 tttggtcttg ctacgagtgg agtttaccct gctgtggaat gttaccaccc acacggtgcg
      241 ctcttaccgc accctttcac ccttaccgac aaagccggcg gtctgctctc tgttgcactg
      301 gtcgtaggct cacgcccccc ggacgttatc cggcactctg ccctgtgtag ctcggacttt
      361 cctctcgttt acttgtcccc cagtttacgt tttcacgaat ttagaggctt caataaacca
      421 gcgattgcct aaccaactca gcactagagt ataatgcttt cgcaaaaaat tgcaaggaaa
      481 taaccgcttg tagttattat ggcaaaataa aaaaggatta agttcattta aaaacttaat
      541 cctcttcgct ttaattcact cgtaaaaatt acgcacgttt gaagtctaag tgaactaat
//
LOCUS       DANLTI010000264          595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.271, whole genome shotgun sequence.
ACCESSION   DANLTI010000264 DANLTI010000000
VERSION     DANLTI010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.271"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>595
                     /locus_tag="PXB09_002727"
     CDS             <1..>595
                     /locus_tag="PXB09_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HDL5234771.1"
                     /translation="VEQGGVEALLNQNRRVPNLKNRVDEAIEQAVVKFALDNPAFGQV
                     RVSKELRKQGIFVSAGGVRSIWLRHHLANFKQRLIALEKLVAEQGIILSETQVQALER
                     KKEDEIACGEIETVHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLYTMKT
                     AISAADMLNDKVLPYFESQGLPMLRILTDRGSEYCGKV"
BASE COUNT          185 a          102 c          146 g          162 t
ORIGIN      
        1 cggttgagca aggtggtgtt gaagcattgc tgaatcaaaa tagacgcgtt cccaacttaa
       61 aaaatcgtgt tgatgaggca atagagcaag ctgttgtgaa gtttgctctt gataacccgg
      121 catttggaca ggtaagagtg agtaaggaac tccgtaaaca aggcatcttt gtttcagcag
      181 gaggtgtacg ttcgatttgg ttacgtcatc atcttgccaa ttttaagcaa agattaatcg
      241 ccctggaaaa actggttgca gaacaaggta ttatactcag tgaaacacag gtacaagcct
      301 tagagcgtaa gaaagaagat gagattgcct gtggtgaaat tgaaacggta caccctggct
      361 atcttggctc acaagatact ttctatgtgg gcaacctcaa aggagtgggt cgtatttatc
      421 aacaaacgtt tattgatact tacagtaaag tggcgtttgc aaaactttat acaatgaaga
      481 ccgctatcag tgctgcggat atgctgaatg ataaagtgtt accatacttt gaaagccaag
      541 gtttaccgat gttacgcata ttaactgacc gaggaagtga atattgtggc aaggt
//
LOCUS       DANLTI010000265          593 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.272, whole genome shotgun sequence.
ACCESSION   DANLTI010000265 DANLTI010000000
VERSION     DANLTI010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.272"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..>593)
                     /locus_tag="PXB09_002728"
     CDS             complement(<1..>593)
                     /locus_tag="PXB09_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5234772.1"
                     /translation="RILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRW
                     KRVDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKI
                     LGNKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNL
                     HIDNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQS"
BASE COUNT          193 a          150 c           89 g          161 t
ORIGIN      
        1 gattggcagt tttgtacaat cacattatca gttgggtaat tagtatccgc ctgaatactt
       61 tcacctgccc tgaccccgta gaaggtgcca ttaaacacaa cattgtcaat atggagattt
      121 ttaacaccag catcatccaa agacttaaat cgaataccaa ttgctttgtt cggtgtttca
      181 atacaaaaac ccgagataaa ataattgctg tgattaatat taaaaacttc ggcccctgct
      241 tgctggatac ctgcacctaa tactaatttg ccggtcttat tgcccaaaat tttcacatta
      301 tcgcgaacag aattaacggc attgttgata cgaaatgtac cgttttcgat aaaaaattga
      361 gaatatctca tagcatttac aaatgctgat tcatcatttg ttaccccgtc accgacggcc
      421 caaaaatcaa ataatgtaag atgtgaaagg tcaacacgct tccaccgccc cccattatta
      481 ttcacaacaa aacaaacccc accatcatca ggcgtaacta aatcctgcaa atcagccaca
      541 aactccccac cgcctgttgt gccgtcctca tagtaagcat ccaccaaaat acg
//
LOCUS       DANLTI010000266          582 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.273, whole genome shotgun sequence.
ACCESSION   DANLTI010000266 DANLTI010000000
VERSION     DANLTI010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.273"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(77..502)
                     /locus_tag="PXB09_002729"
     CDS             complement(77..502)
                     /locus_tag="PXB09_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5234773.1"
                     /translation="MYKHILVAVDLSEESLVLVRKGAALAEKCGAKLSLIHVDVNFSD
                     LYTGLIDINMSSVQYSVVEETNTALAELASKVNYPVSECLNGTGDFSQVLEEAVEKHN
                     VDLLITGHHQDFWSKFMSSTRRVMNNITVDMLVVPLADE"
BASE COUNT          187 a          119 c           90 g          186 t
ORIGIN      
        1 taaattttcc caaaaaaata accgcttgta agacagataa actgtctcaa gcggttattt
       61 ttcattcact ttcttgctat tcatctgcta atggcacaac cagcatatca acagtgatat
      121 tattcatgac tcgacgagtt gaagacataa atttactcca gaagtcctga tgatggccag
      181 tgatgagtaa atcgacattg tgtttttcta cggcctcttc caaaacttga ctaaaatctc
      241 ccgttccgtt taaacattca gatacaggat aatttacttt tgaggcaagt tcagccagtg
      301 ccgtatttgt ttcttcaaca acactgtatt gtaccgaaga catattaata tcaattaatc
      361 ctgtatagag atccgaaaaa ttaacatcaa cgtgaatgag ggaaagttta gctccgcatt
      421 tttctgctaa cgcagccccc ttacgcacta aaacaagact ttcttcagaa agatccactg
      481 caactaagat atgtttatac ataatatgct ccttgcttgt gagagttgtt tactttgtgt
      541 ataaacatac taacacactc tttttgataa aaacttgaag ta
//
LOCUS       DANLTI010000267          541 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.274, whole genome shotgun sequence.
ACCESSION   DANLTI010000267 DANLTI010000000
VERSION     DANLTI010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.274"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>541
                     /locus_tag="PXB09_002730"
     CDS             <1..>541
                     /locus_tag="PXB09_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5234774.1"
                     /translation="KMPRGDKNAMKGFIFNIPSIEYQKKCIANYFAFDQKIQLNTQTN
                     QTLEAIAQAIFKSWFVDFDPVRAKAAALSEGKSEHEANLAAMSVICGKDTSELNDTEY
                     KALWQIAEAFPSEFGDEGLPIGWKFNQADNLFDVGIGKTPPRKESEWFSDNANDTEWI
                     SIKDMGNQGLFITESSEYLK"
BASE COUNT          193 a          105 c          114 g          129 t
ORIGIN      
        1 aaaatgccac gaggggataa aaatgcaatg aaaggtttta ttttcaatat cccaagtatt
       61 gaatatcaaa aaaaatgtat tgctaattat tttgcctttg accaaaaaat ccaactcaac
      121 acccaaacca accaaaccct agaagccatt gcacaggcaa tcttcaaaag ctggtttgtg
      181 gattttgacc ctgtgcgcgc caaagccgcc gccctaagcg aaggcaaaag cgaacacgaa
      241 gccaaccttg cggcaatgtc ggtgatttgt ggtaaagaca ccagcgagtt aaacgacacc
      301 gaatacaaag cgctttggca aatcgccgaa gccttcccaa gtgagtttgg agatgaaggg
      361 ttacctattg gctggaaatt caatcaagca gacaatttat ttgatgttgg tattgggaaa
      421 accccaccaa gaaaagagag tgaatggttt tctgataatg caaatgatac agaatggatt
      481 tctattaaag atatgggaaa tcagggatta tttatcacag aaagtagcga atatctaaaa
      541 g
//
LOCUS       DANLTI010000268          540 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.275, whole genome shotgun sequence.
ACCESSION   DANLTI010000268 DANLTI010000000
VERSION     DANLTI010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.275"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..>540)
                     /locus_tag="PXB09_002731"
     CDS             complement(<1..>540)
                     /locus_tag="PXB09_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234775.1"
                     /translation="LNKSNIDFARIAFDSIRSAQNCTVLGLDISKFFDHIDHKILKDM
                     WCKVLGVPSLPEDHHSVFKAITKFVKVDRDTVFEFFNISLHNPRKNGKNRICSPREFR
                     EYRKLKKPDLFNDNPAFFINKGQKGIPQGSPISALLSNIYMLEFDVLVKEKIMECKGS
                     YFRYCDDILCIIPNEYEEF"
BASE COUNT          185 a          100 c           71 g          184 t
ORIGIN      
        1 taaattcttc gtattcatta ggaatgatac atagaatgtc atcacaataa cgaaaataac
       61 tccctttgca ctccataatc ttttctttaa ctaacacatc aaactctaac atatagatat
      121 tggataacaa tgcacttatt ggagaacctt gaggaatccc tttctggcct ttattaataa
      181 aaaaagctgg attatcatta aataagtcag gtttctttaa tttcctatat tctcgaaatt
      241 cccgagggct acaaattcta ttcttcccat ttttcctagg attatgaagg gagatattaa
      301 agaattcaaa tacagtatct ctatctactt ttacgaattt agtaatagcc ttaaatacag
      361 aatgatggtc ttcaggtaaa ctaggtacac ccaaaacttt acaccacata tctttcagaa
      421 ttttatggtc tatatggtca aagaacttag atatatctag ccctaaaacc gtgcaatttt
      481 gagcgcttcg aatactatca aaagcgattc tggcaaaatc aatattgctt ttatttagtt
//
LOCUS       DANLTI010000269          495 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.276, whole genome shotgun sequence.
ACCESSION   DANLTI010000269 DANLTI010000000
VERSION     DANLTI010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.276"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..>495)
                     /locus_tag="PXB09_002732"
     CDS             complement(<1..>495)
                     /locus_tag="PXB09_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234776.1"
                     /translation="QAILVESDKIYFIGSTIDAIFDKTLIDNTKASDVIYFLNKLLQS
                     PYGRKISNHLITLAIYDENIQIQYSPQFIAKNLTMSDIQALQKLGFQFSHSKEYLWKS
                     YAGLGGKITQFKNRKEILEKYKFKQPIIAKAKSYQKSIEFSFDDTISVIAAPITIPAS
                     IILFV"
BASE COUNT          157 a           76 c           79 g          183 t
ORIGIN      
        1 tacaaataaa ataatagatg cgggaatcgt aattggtgct gcaatgaccg aaatggtgtc
       61 atcaaagcta aattctatgc ttttctgata acttttcgct ttagcgatta taggttgctt
      121 aaatttatac ttttctagta tttccttgcg atttttaaac tgtgtgattt taccaccaag
      181 acctgcatag cttttccata gatattcttt tgaatggcta aattgaaaac ctaacttttg
      241 tagagcttga atatcgctca tggtgagatt ttttgcaata aattgcggac tgtactgaat
      301 ttgaatattt tcatcataaa tggctaaagt aattaggtga ttactgatct tccttccata
      361 cggactttga agaagtttat tcaaaaaata aataacatct gaagcttttg tattatctat
      421 cagcgtttta tcaaatatcg catcaattgt ggaaccaatg aaataaattt tatctgattc
      481 aaccaaaatt gcttg
//
LOCUS       DANLTI010000270          467 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.277, whole genome shotgun sequence.
ACCESSION   DANLTI010000270 DANLTI010000000
VERSION     DANLTI010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.277"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(44..169)
                     /gene="ykgO"
                     /locus_tag="PXB09_002733"
     CDS             complement(44..169)
                     /gene="ykgO"
                     /locus_tag="PXB09_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDL5234777.1"
                     /translation="MKILNSLKTAKSRHPDCQIVRRKGKLYVICKTNPRFKARQR"
     gene            complement(178..450)
                     /locus_tag="PXB09_002734"
     CDS             complement(178..450)
                     /locus_tag="PXB09_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDL5234778.1"
                     /translation="MKKGIHPENYREVLFYDASVQQGWVIRSCAATNKTMVWEDGKEY
                     PLYTLDTSSASHPVYTGKRREVNTEGRASQFKDRFKGFASTLSNQK"
BASE COUNT          122 a           88 c           92 g          165 t
ORIGIN      
        1 ataaaaaaca ccttaataaa ttagcttatt aaggtgctgg tttttaacgc tgacgagctt
       61 taaatctcgg gttggttttg caaatcacat aaagtttgcc tttgcgtctg acaatttggc
      121 aatccgggtg gcgtgatttt gcggttttaa gtgagtttaa gattttcatt ttatcctcta
      181 tttttgattt gaaagcgttg aagcaaagcc tttaaatcta tctttaaatt gacttgcacg
      241 accttctgta ttcacttcac ggcgtttacc tgtgtaaaca gggtgagacg ccgatgaggt
      301 atctaaggtg taaagtgggt attctttgcc atcttcccat accattgttt tgttggttgc
      361 cgcacaagaa cggataaccc agccttgttg cactgaggca tcatagaaca acacttcacg
      421 ataattttca ggatgaatcc cttttttcat attttctcca gaattta
//
LOCUS       DANLTI010000271          464 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.278, whole genome shotgun sequence.
ACCESSION   DANLTI010000271 DANLTI010000000
VERSION     DANLTI010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.278"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..>464
                     /locus_tag="PXB09_002735"
     CDS             <1..>464
                     /locus_tag="PXB09_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5234779.1"
                     /translation="VLAIIMTLRCTGIRRGQLVKLKIGDVNLSNRTIYISPEINKNHD
                     YHIVPISDSLYPHIERLIQELKIHKQTDDCQLFNLNLFSRYTRRKGQPMSQNQLTHIF
                     RHISDLVGFTSSPHRFRHTVATQLMKKPENVYVVKKLLGHKDISVTLGYIEY"
BASE COUNT          159 a           77 c           82 g          146 t
ORIGIN      
        1 ttgttcttgc tatcattatg acattgagat gcacaggaat taggagaggg caattggtta
       61 aactgaaaat cggtgatgtt aatttatcaa ataggacgat ctatatttca ccagaaatta
      121 ataaaaacca tgattatcat atagtaccga tatccgattc actttatccc catatagaaa
      181 ggctgattca ggagttaaag atccataaac aaacggatga ttgccagtta tttaacctca
      241 atttattttc tcgttatact cgtaggaaag gtcagccgat gagccaaaac cagcttactc
      301 atatatttag gcatatttcc gatttggttg gcttcacgtc atcaccacat agatttcggc
      361 atacagtagc tactcaattg atgaagaaac ctgaaaatgt ttatgtagtt aagaaattat
      421 taggtcataa agatatcagc gttacattag gatatattga atac
//
LOCUS       DANLTI010000272          458 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.279, whole genome shotgun sequence.
ACCESSION   DANLTI010000272 DANLTI010000000
VERSION     DANLTI010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.279"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(13..>458)
                     /locus_tag="PXB09_002736"
     CDS             complement(13..>458)
                     /locus_tag="PXB09_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5234780.1"
                     /translation="AATGSRVSELIQIKCEHIKIGYLDLYSKGGKLRRIYIPKSLQKE
                     CSEWLRLNNKHNGFIFLNKYGDRITTRGIASQLKVFARRYKLDPKIVYPHSFRHRFAK
                     SFLERFNDIAFLADLMGHESIETTRIYLRKTSTEQQEIVNKIIDW"
BASE COUNT          143 a           83 c           63 g          169 t
ORIGIN      
        1 gccccttaaa aattaccaat caataatttt attcacaatt tcctgctgtt ctgtgcttgt
       61 ttttcgtaaa tagatccttg tggtttctat gctttcgtgc cccattaaat cagcaagaaa
      121 agcaatatca ttaaatcgtt ctaaaaaact ttttgcaaaa cgatggcgaa atgaatgtgg
      181 ataaacaatt ttaggatcta atttatagcg tctagcaaat acttttaatt ggctggcaat
      241 gccacgagta gtaattctat caccatattt atttaagaaa ataaatccat tatgcttatt
      301 atttaatctc aaccattcag aacactcttt ttgcagagat tttgggatgt aaattcgtct
      361 taattttcca cctttagaat agaggtctaa atagcctatt ttaatatgtt cacattttat
      421 ctggattaat tcacttactc tcgaacctgt tgctgcca
//
LOCUS       DANLTI010000273          453 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.280, whole genome shotgun sequence.
ACCESSION   DANLTI010000273 DANLTI010000000
VERSION     DANLTI010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.280"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..156)
                     /locus_tag="PXB09_002737"
     CDS             complement(<1..156)
                     /locus_tag="PXB09_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234781.1"
                     /translation="MNNQYNPLYGMLGILASAASVILPLYAAYKDYQFGENMLSLMDI
                     IIFPLGIV"
     gene            291..>453
                     /locus_tag="PXB09_002738"
     CDS             291..>453
                     /locus_tag="PXB09_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5234782.1"
                     /translation="MKVHEKIKLLRENNHWTQDEMAQKLSMTTKGYAKIERGETISNL
                     PKIEQIAEVF"
BASE COUNT          182 a           81 c           60 g          130 t
ORIGIN      
        1 aacaatacct aacgggaaaa taattatatc cataagagat aacatattct ccccaaattg
       61 atagtcttta tatgctgcat aaagaggcaa aattactgat gcagctgacg ctaaaatacc
      121 tagcattcca tataatggat tatattgatt attcatgaat gtttcttctc ctgtgagctt
      181 aagataaaat ttactctatt ctaaattgct caataaactg ctacaatcca caaaatttat
      241 cctttaccac atcaagttat atcccaactc ccacaatcta taggtgttat atgaaagtac
      301 acgaaaaaat caaattactg cgagaaaata atcattggac acaagatgaa atggctcaaa
      361 aattaagtat gacaaccaaa ggttatgcaa aaatagaacg tggtgaaact atctctaatt
      421 taccgaaaat agaacaaatc gcagaagtat tta
//
LOCUS       DANLTI010000274          443 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.281, whole genome shotgun sequence.
ACCESSION   DANLTI010000274 DANLTI010000000
VERSION     DANLTI010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.281"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(75..>443)
                     /locus_tag="PXB09_002739"
     CDS             complement(75..>443)
                     /locus_tag="PXB09_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234783.1"
                     /translation="EFGELCGGIARNNPEMIKDAIGDLIVVCIIKAKQEKQPIYPVQF
                     ENHRLNGYRFDISVAVHCLYDIERIKDRGKYSRFFGILHHLALINRFTLNDCLAHAYD
                     QIKDRKGEMQAGIWVKEDDL"
BASE COUNT          133 a           86 c           79 g          145 t
ORIGIN      
        1 aagaagaaac cgaaactctt atagagtggc ggaatgcttt tctgcaagat gtttcggttt
       61 ttatagctta ggtactataa atcgtcttct ttaacccaaa tcccagcttg catttcgccc
      121 ttgcgatctt tgatttggtc gtaggcgtga gcgaggcagt cattaagcgt aaatctattt
      181 attaaggcta aatggtgtaa tatgccaaaa aaacggctat atttacctct gtctttaatg
      241 cgttcaatat catatagaca atgaacagcg accgaaatat caaatctgta accatttaat
      301 ctatgatttt caaattgtac agggtaaata ggttgttttt cttgttttgc tttaataata
      361 cagacaacaa tcaaatcccc aatcgcatct ttaatcattt caggattatt gcgggcaatg
      421 cctccgcaga gttcgccaaa ctc
//
LOCUS       DANLTI010000275          434 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.282, whole genome shotgun sequence.
ACCESSION   DANLTI010000275 DANLTI010000000
VERSION     DANLTI010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.282"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..>434)
                     /locus_tag="PXB09_002740"
     CDS             complement(<1..>434)
                     /locus_tag="PXB09_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL5234784.1"
                     /translation="DCDSSRGLAEYNKGRFLKLRDDFNAKVLAGEIDYPMLYVLMVFS
                     FNNQIRFNRKGLFNLPVGKRDFNSKMRSKLVLFSEELKSKDVQFMKKDYREISLDDFS
                     QETFIYCDPPYLITNATYNEHGMWTEIEEKALLEFLDEANEKG"
BASE COUNT          146 a           86 c           45 g          157 t
ORIGIN      
        1 cctttttcat tggcttcgtc caaaaattca agtaaagctt tttcttctat ttcagtccac
       61 attccatgtt cattatatgt tgcatttgta atcaaataag gtggatcaca ataaataaaa
      121 gtctcctgag aaaaatcatc taacgaaatt tctctataat cctttttcat aaactggaca
      181 tctttacttt ttaattcttc agaaaataat acaagtttac ttctcatttt ggaattaaaa
      241 tctctcttac ctaccggaag attaaaaagt ccctttctat taaacctaat ctgattatta
      301 aaagagaaca ccataagtac ataaagcatt ggataatcta tttctccagc aagaacttta
      361 gcgttaaaat catctcttaa cttgagaaat cttcctttat tgtattcggc taagcctcta
      421 ctactatcac aatc
//
LOCUS       DANLTI010000276          407 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.denovo.285, whole genome shotgun sequence.
ACCESSION   DANLTI010000276 DANLTI010000000
VERSION     DANLTI010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.denovo.285"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            27..374
                     /locus_tag="PXB09_002741"
     CDS             27..374
                     /locus_tag="PXB09_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234785.1"
                     /translation="MFREEAIEYQSKKWKSTAVLFSRVPALVVFSISFFIFTAFILFI
                     VFGNYTRRETVVGELVMQSHPILLSAPKSGYISENYIQPHQQVKKRAIRWLKLRWIEL
                     RIAKILMLILFFR"
BASE COUNT          132 a           68 c           72 g          135 t
ORIGIN      
        1 atgtagtagt gtaaaattgg tattatatgt tcagagaaga agctattgaa tatcaatcga
       61 aaaaatggaa aagcacagct gtactattta gcagagttcc agctttggtt gtcttttcca
      121 tttctttctt tatctttact gcctttattc tatttattgt gtttggtaat tatacccgcc
      181 gtgaaacggt tgtgggtgaa ttagtgatgc aatctcatcc gattttatta tctgccccaa
      241 aatccggcta tatatccgaa aattatattc aaccacatca gcaggtaaaa aaaagggcga
      301 tccgctggtt aaaattacgc tggatagaat tacgcatagc gaaaatatta atgttaattc
      361 tattctttcg ttgaaatcac aaattcaagc aacagaacaa gcgataa
//
LOCUS       DANLTI010000277         7859 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.120, whole genome shotgun sequence.
ACCESSION   DANLTI010000277 DANLTI010000000
VERSION     DANLTI010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7859
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.120"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            complement(<1..218)
                     /locus_tag="PXB09_002742"
     CDS             complement(<1..218)
                     /locus_tag="PXB09_002742"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234786.1"
                     /translation="MPENSDWISCSGCENSRSSGKKPNFDPKPQKTRNDSSYNLFIWG
                     RAPVALATLNDSSYNSDEPATPAQRRAS"
     gene            complement(381..1673)
                     /locus_tag="PXB09_002743"
     CDS             complement(381..1673)
                     /locus_tag="PXB09_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5234787.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFYK
                     GKTETFKGFEFVDQLVAHLPPRRVQLLRRYGVYAGKVRKQWQERPNIYSLAPESWQKG
                     HPRESKIVPAIPQEKPETVQVSDAWSKLRKQSWARLLQKVYEVDPFVCPKCQGTMSVV
                     AIIEDPKELAKIINWAKQQEREQPVAVCARSPPELALV"
     gene            1836..2681
                     /gene="sul2"
                     /locus_tag="PXB09_002744"
     CDS             1836..2681
                     /gene="sul2"
                     /locus_tag="PXB09_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL5234788.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            2850..3653
                     /locus_tag="PXB09_002745"
                     /note="aph(3'')-Ib"
     CDS             2850..3653
                     /locus_tag="PXB09_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL5234789.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            3653..4489
                     /locus_tag="PXB09_002746"
     CDS             3653..4489
                     /locus_tag="PXB09_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL5234790.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            4825..5640
                     /locus_tag="PXB09_002747"
     CDS             4825..5640
                     /locus_tag="PXB09_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL5234791.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(5794..6387)
                     /locus_tag="PXB09_002748"
                     /pseudo
     CDS             complement(5794..6387)
                     /locus_tag="PXB09_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(6388..6537)
                     /locus_tag="PXB09_002749"
                     /pseudo
     CDS             complement(6388..6537)
                     /locus_tag="PXB09_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            6557..7063
                     /locus_tag="PXB09_002750"
     CDS             6557..7063
                     /locus_tag="PXB09_002750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234792.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            7041..7613
                     /locus_tag="PXB09_002751"
                     /pseudo
     CDS             7041..7613
                     /locus_tag="PXB09_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
     gene            7626..>7859
                     /locus_tag="PXB09_002752"
     CDS             7626..>7859
                     /locus_tag="PXB09_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5234793.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEI"
BASE COUNT         1948 a         1966 c         2018 g         1927 t
ORIGIN      
        1 atcgacgctc gccgttgtgc tggtgttgcc ggttcatcag aattatagga actgtcattt
       61 aaagtcgcta aggctacagg tgcacgcccc caaataaata aattatagga actgtcattt
      121 cgggtttttt gcggtttcgg gtcaaaattc ggttttttcc ccgaactacg actgttttcg
      181 caccccgaac aactaatcca atcagaattt tccggcaacg ccgactccaa gaagtgtaat
      241 tccagtctat ttctgccgtc aacccctgat tcgcgttaat gcgacaaagc tcaaacacat
      301 aactccccca cgaagccata taaactccga tttcgaggtg ttatcctgtt ccgcataaac
      361 ttcgtttttg ggtattatac ctacaccaaa gcaagctcag gaggtgaacg agcacagacg
      421 gccactggct gctcccgttc ctgctgcttt gcccagttaa taatcttggc aagctccttg
      481 ggatcctcga ttatcgccac aaccgacatt gttccctggc attttgggca aacaaacggg
      541 tcaacttcat agactttctg taacaaccgt gcccaacttt gtttgcgcaa cttggaccag
      601 gcatcggaaa cttggacagt ttccggtttc tcctgaggta tggctggaac aattttggat
      661 tcgcgtggat gacctttttg ccaactttct ggggccaggc tataaatatt ggggcgctct
      721 tgccactgct tgcggacttt gcccgcatat acgccatagc gacgaagcaa ttgaacccgc
      781 cttggtggta aatgggccac aagctggtcg acgaattcaa agcctttgaa ggtctctgtt
      841 tttcctttgt agaatccctt tgggctagct gtccagatta tcgtgtcgga agctggatca
      901 tactgaattt tttctgcaca ggtagcgccg cgaacgacat actggccgag ggcttctcga
      961 tcggccttgt tgaatagtct ggtttcgctc tcgatgctaa agccggaatg cttccagtct
     1021 ctgagcatgt tcactcgggc ttgatctatt agttcctttc gcagaaacaa agccataatc
     1081 gctgcttgcc agaccttgag catcccttcg tcggctccaa ttggtaaata tacaaagcgg
     1141 tcgtacttgg tgaacccacc ttccagaacc agaacatgcc agtgcgggtg gaatcgagcg
     1201 aattcaccaa acgactgata gctgacaaca caggcacata gtagttcttg accggctgcc
     1261 agggagaaaa aatcagaaag caaggagaat accagcctgg acacctcgcc aaacagtcgc
     1321 ttatccgatt taaagtatgg tctgagaatc ttgggaatcg taaaaacaaa ttgccgatgc
     1381 ggtagatcaa ggagcaaatc ctcggccagg tattcagcat agagtaaggt ccgtttttgg
     1441 tcacaggatg ggcaaaggtg gaaaaccttg cacgaaaatg gcctgaagta cgaatgtcca
     1501 caatcatggc aacgtattcg aacaacaccc ttggtccaat cggcacattc agcaaaatgc
     1561 tcaaggcggt caaggatagt ttgcgatgga cttgcgtagg cttggtactg ggttagagaa
     1621 ttgcggacta tggtctggat tatcccttcc cgatggggaa tgtaagttcc catacctata
     1681 catacgcagg aaaacgatca tttgcttgca attgcgaaga aaataatgga aaatgtggac
     1741 tggcgccacc taacaaccgg ttcgagcgga ctcacgggac aagcccgttc gcagctcaac
     1801 cgaaagttag gttgacgcct tcggcgcgga ggaaaatgga atatacaagt aaatcacaaa
     1861 tagctcgaaa taaatcgctc atcattttcg gcatcgtcaa cataacctcg gacagtttct
     1921 ccgatggagg ccggtatctg gcgccagacg cagccattgc gcaggcgcgt aagctgatgg
     1981 ccgagggggc agatgtgatc gacctcggtc cggcatccag caatcccgac gccgcgcctg
     2041 tttcgtccga cacagaaatc gcgcgtatcg cgccggtgct ggacgcgctc aaggcagatg
     2101 gcattcccgt ctcgctcgac agttatcaac ccgcgacgca agcctatgcc ttgtcgcgtg
     2161 gtgtggccta tctcaatgat atccgcggtt ttccagacgc tgcgttctat ccgcaattgg
     2221 cgaaatcatc tgccaaactc gtcgttatgc attcggtgca agacgggcag gcagatcggc
     2281 gcgaggcacc cgctggcgac atcatggatc acattgcggc gttctttgac gcgcgcatcg
     2341 cggcgctgac gggtgccggt atcaaacgca accgccttgt ccttgatccc ggcatggggt
     2401 tttttctggg ggctgctccc gaaacctcgc tctcggtgct ggcgcggttc gatgaattgc
     2461 ggctgcgctt cgatttgccg gtgcttctgt ctgtttcgcg caaatccttt ctgcgcgcgc
     2521 tcacaggccg tggtccgggg gatgtcgggg ccgcgacact cgctgcagag cttgccgccg
     2581 ccgcaggtgg agctgacttc atccgcacac acgagccgcg ccccttgcgc gacgggctgg
     2641 cggtattggc ggcgctgaaa gaaaccgcaa gaattcgtta actgcacatt cgggatattt
     2701 ctctatattc gcggttcagc aggcatgtcc cctttgaggg cgacccgacg acaggataat
     2761 cgaccttatg gtgcgcaaat atttcggcac agatggtatt cgtggcaaag ccacctccgc
     2821 gcttcatcag aaaactgaag gaacctccat tgaatcgaac taatattttt tttggtgaat
     2881 cgcattctga ctggttgcct gtcagaggcg gagaatccgg tgattttgtt tttcgacgtg
     2941 gtgacgggca tgccttcgcg aaaatcgcac ctgcttcccg ccgcggtgag ctcgctggag
     3001 agcgtgaccg cctcatttgg ctcaaaggtc gaggtgtggc ttgccccgag gtgatcaact
     3061 ggcaggagga acaggagggt gcatgcttgg tgataacggc aattccggga gtaccggcgg
     3121 ctgatctgtc tggagcggat ttgctcaaag cgtggccgtc aatggggcag caacttggcg
     3181 ctgttcacag cctatcggtt gatcaatgtc cgtttgagcg caggctgtcg cgaatgttcg
     3241 gacgcgccgt tgatgtggtg tcccgcaatg ccgtcaatcc cgacttctta ccggacgagg
     3301 acaagagtac gccgcagctc gatcttttgg ctcgtgtcga acgagagcta ccggtgcggc
     3361 tcgaccaaga gcgcaccgat atggttgttt gccatggtga tccctgcatg ccgaacttca
     3421 tggtggaccc taaaactctt caatgcacgg gtctgatcga ccttgggcgg ctcggaacag
     3481 cagatcgcta tgccgatttg gcactcatga ttgctaacgc cgaagagaac tgggcagcgc
     3541 cagatgaagc agagcgcgcc ttcgctgtcc tattcaatgt attggggatc gaagcccccg
     3601 accgcgaacg ccttgccttc tatctgcgat tggaccctct gacttggggt tgatgttcat
     3661 gccgcctgtt tttcctgctc attggcacgt ttcgcaacct gttctcattg cggacacctt
     3721 ttccagcctc gtttggaaag tttcattgcc agacgggact cctgcaatcg tcaagggatt
     3781 gaaacctata gaagacattg ctgatgaact gcgcggggcc gactatctgg tatggcgcaa
     3841 tgggagggga gcagtccggt tgctcggtcg tgagaacaat ctgatgttgc tcgaatatgc
     3901 cggggagcga atgctctctc acatcgttgc cgagcacggc gactaccagg cgaccgaaat
     3961 tgcagcggaa ctgatggcga agctgtatgc cgcatctgag gaacccctgc cttctgccct
     4021 tctcccgatc cgggatcgct ttgcagcttt gtttcagcgg gcgcgcgatg atcaaaacgc
     4081 aggttgtcaa actgactacg tccacgcggc gattatagcc gatcaaatga tgagcaatgc
     4141 ctcggaactg cgtgggctac atggcgatct gcatcatgaa aacatcatgt tctccagtcg
     4201 cggctggctg gtgatagatc ccgtcggtct ggtcggtgaa gtgggctttg gcgccgccaa
     4261 tatgttctac gatccggctg acagagacga cctttgtctc gatcctagac gcattgcaca
     4321 gatggcggac gcattctctc gtgcgctgga cgtcgatccg cgtcgcctgc tcgaccaggc
     4381 gtacgcttat gggtgccttt ccgcagcttg gaacgcggat ggagaagagg agcaacgcga
     4441 tctagctatc gcggccgcga tcaagcaggt gcgacagacg tcatactaga tatcaagcga
     4501 cttatcctat cccctgggaa cacatcaatc ttaccggaga atatcgttgg ccaaagcctt
     4561 agcgtaggat ttcgccctct cccgcaaacg acccctttat tgtaggtggg ccagttggtg
     4621 attttgaact tttgctttgc cacggaacgg tctgcgttgt cgggaagatg cgtgatctga
     4681 tccttcaact cagcaaaagt tcgatttatt caacaaatcc acgttgtgtc tcaaaatctc
     4741 ttatgttata ttgcacaaga taaaaatata tcatcatgaa caataaaact gtctgcttac
     4801 ataaacagta atacaagggg tgttatgagc catattcaac gggaaacgtc ttgctcgagg
     4861 ccgcgattaa attccaacct ggatgctgat ttatatgggt ataaatgggc tcgcgataat
     4921 gtcgggcaat caggtgcgac aatctatcga ttgtatggga agcccgatgc gccagagttg
     4981 tttctgaaac atggcaaagg tagcgttgcc aatgatgtta cagatgagat ggtcagacta
     5041 aactggctga cggcatttat gcctcttccg accatcaagc attttatccg tactcctgat
     5101 gatgcatggt tactcaccac tgcgctcccc gggaaaacag cattccaggt attagaagaa
     5161 tatcctgatt caggtgaaaa tattgttgat gcgctggcag cgttcctgcg ccggttgcat
     5221 tcgattcctg ttagtaattg tccttttaac agcgatcgcg tatttcgtct cgctcaggcg
     5281 caatcacgaa tgaataacgg tttggttgat gcgagtgatt ttgatgacga gcgtaatggc
     5341 tggcctgttg aacaagtctg gaaagaaatg cataagcttt tgccattctc accggattca
     5401 gtcgtcactc atggtgattt ctcacttgat aaccttattt ttgacgaggg gaaattaata
     5461 ggttgtattg atgttggacg agtcggaatc gcagaccgat accaggatct tgccatccta
     5521 tggaactgcc tcggtgaatt ttctccttca ttacagaaac ggctttttca aaaatatggt
     5581 attgataatc ctgatatgaa taaattgcag tttcatttga tgctcgatga gtttttctga
     5641 tagttagtct ttgtagagac acaaacctga aattccggac accgcgcttc aggacatctc
     5701 cctggacgcc gatatctggc agtatccgga cggtactatc gaacgccggg ccaacggtac
     5761 tcccctgccc tttatgactg acgaccggct atttcaccca cgcacttctc catgaaattt
     5821 agcatcgtcg cggttaatgt cgaaaatttg ccacctgacg tggttggcat cgagggtgaa
     5881 aactgccgtg gcgagggtgt tctcctcatc cggatcgtcg gcagccagcc ggtaaattgg
     5941 cagttctgcg tcatgggtat ctgagagaat ggtttttgcc gccgcggcgt caaacggagg
     6001 ttgcgtttcc cgccactgca cgaggcgtaa ctgccgcgac gctgaactgt cggtaacgat
     6061 ctgctcaacg ccagccagtg ccgcatgcac cagatggttg gcatgcccgg ttaccgtcgt
     6121 caggggtaga acggaacagc cttgaccggt ggcctcaacg ctgaacagcc gcgcatcgcc
     6181 cagctgcccg agcgtatggt gaaacgcccc ggatcgcggc tggccggtaa gtatagtgat
     6241 ggcctcgtcg agggtgttcg cattcagcga ggcgcgagcc aggatctgac gcggtaatcc
     6301 ctgcggacga tacactgcac ggatgttatt caccgtgtta acgatacctt tttcatttac
     6361 cgcaaaggtg tggccgcaaa tcgacccctt gggtggcagt ccgaacagcg cccgatcatg
     6421 gtcgcgctct aggtagctat ccaacccatc gagcaggcgc tgttctggcc actcgccgct
     6481 ttcaaccttg ccgagtatcc acgcgcctac cagcaccttg cgccgggtgt cctccttggc
     6541 gtataacgag caagttttgg cttaccaaac cttaaaatcc acacaatcac agacacagga
     6601 aaaatcagat gaacgagcaa aacaactctt gggttcaaga gtggttgaac aagtcagcga
     6661 aagcgagcga gagaatggca acggacgaga aatttcgtca ggaagtcgcc aaacgagcaa
     6721 cgaacagcgg acaggatatt caggcaattc tagccaagaa tatcgccaaa tatcaaaatc
     6781 aggcgaaaga ttaactaata aaacgtctga aaacgctctc atagagccta caagacctat
     6841 caaaaataaa aatggtagta aggtagcacc cacaccaaca aacacgccta aaacgcaaaa
     6901 taacgcaaat tctaatctat tgtcatcaga acagtatcgg cagactatgg agtttttgcg
     6961 agaatttaac gaccgattgg agcaaatcgc ccaaaatatc ctagaaaatc agctaaaagc
     7021 attgagaact aaggctaaac catctcattg ccaatggtat tgaattactt gatgtagaag
     7081 gtgcgattgt ttcgggtaca gctactggcg actggactct atcttgtgta cgaggcgatg
     7141 taaaaagtat gacctttgtg ttcaatgatg ggcgtattgt cagcacgact aacaaaggga
     7201 atagtgagaa tatcggttgg ttatctgata gttcaggcat tccttgtgtt cccggggaga
     7261 gaaaaacaaa tgcaccagaa tatttaggca caaatttctt cttagcggct gccagtgccg
     7321 cagcccaagg gttttcacaa tcacaaacaa cgacagtagt tgatggcaat agtgttgttg
     7381 gagctgttac cggtgatcaa ggtaagttca tcttagggca agccatcggc ggtggtttaa
     7441 aagaatccgc cgactggttt agaaagcgtt ttgctgaaaa ctttgatgct gtctatgtac
     7501 cacctggaca tcgtgtcgct attcatatcg agaaagagat tgagatcgat tacaactcca
     7561 aaggacgtaa agtgaaatac ggaaacacat caactaatac acaacttgat taaaaggaac
     7621 aaacaatgaa agctttatat tgcataatga tgagtgcctt attgataaca ggttgcacaa
     7681 cttcaactga agaattatta cccgctaacg gcagtacgat gcgagatatt tgggataaag
     7741 gagcaggtaa taacgatcta cacttatacc gttcacaaca aggacgaaca ctcgatcctg
     7801 tcgattatat tcctaacact gagcaacgag cctatacccg tacggcagaa aatgaaatt
//
LOCUS       DANLTI010000278         4384 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.164, whole genome shotgun sequence.
ACCESSION   DANLTI010000278 DANLTI010000000
VERSION     DANLTI010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.164"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..257
                     /locus_tag="PXB09_002753"
     CDS             <1..257
                     /locus_tag="PXB09_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5234794.1"
                     /translation="DEPATPAQRRASMTWAQRLKRVFNIDIETCSGCGGAMKVIACIE
                     DPIVIKQILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
     gene            726..1172
                     /locus_tag="PXB09_002754"
                     /pseudo
     CDS             726..1172
                     /locus_tag="PXB09_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            1449..2663
                     /gene="floR"
                     /locus_tag="PXB09_002755"
     CDS             1449..2663
                     /gene="floR"
                     /locus_tag="PXB09_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL5234795.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            2691..2996
                     /locus_tag="PXB09_002756"
     CDS             2691..2996
                     /locus_tag="PXB09_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5234796.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            3108..>4384
                     /locus_tag="PXB09_002757"
     CDS             3108..>4384
                     /locus_tag="PXB09_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL5234797.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRAS"
BASE COUNT          844 a         1268 c         1350 g          922 t
ORIGIN      
        1 ctgatgaacc ggcaacacca gcacaacggc gagcgtcgat gacatgggcg caacggctca
       61 agcgtgtttt caatatcgac atcgagacct gcagcggctg cggcggcgcc atgaaagtca
      121 tcgcctgcat tgaagaccct atagtgatca agcagatcct tgatcacctg aagcacaaag
      181 ccgaaaccag cgggaccagg gcgttacccg aaagccgggc gccaccggct gagctgctcc
      241 tgggtctgtt tgactgacga gcctgaaggc caacgatacc aatcaaaatg ctgcgttcac
      301 agcgccgcgg cagggatccg ccgtgctggt tgtcggaaaa ggagccgcta gtgggaaaga
      361 ggagggtaaa ttttcagcgt tgctggctcc ccgtcagccg gattgggttg catcgcaggg
      421 gtgtcgaaag agtcaactgc ggtccaaagc tgttggactt gggtgaaaag ggcgtttatt
      481 cttcctatac gtgccgcgtt ccaggcggcg actatgaggg ctatgtcgat gcccatgtgc
      541 gccggctgga ggcgctacgc cgggccggta tcgtcgagcg gatcgacgcc gaccaatggc
      601 gcatccccga tgatctggtc agccgtgccg ccgcccatga cgccggccga gacagtcagg
      661 ccagcgttcg cgtcctttcc ccggtcgatc tgaacaaaca gatcggatcg gacggcgcga
      721 cctggctgga ccggcggctg atccacggcg agacggccga ccttgcgcca accggcttcg
      781 ggcaacaagt ccgcgaagcc atggaccagc gccgcgagca ccatatcgaa cagggcgacg
      841 ccacccgcag ccgggacagc cgcgtcttct accggcgcaa ccttctcgcc atcctgcggg
      901 agcgcgaggt agccggcgtc ggatcggata tggctttgag taagggcctg ccgttccgcg
      961 ccgccacgga cggcgagagc gtcagcggca agtttaccgg aaccgtgcat ctatcgagcg
     1021 gcaagttcgc cgtggtcgag aaatcccatg agttcaccct tgtcccgtgg cggccgatca
     1081 tcgaccgcca actcggccgc gaggttatgg gcatcgtgca gggcgggtcg gtgtcgtggc
     1141 agttagggcg gcagaggggg ctggaacgct gagtgcgccc atgccgcatt gcgaagcaaa
     1201 agataatcgg ataaaatgta gcaattcata ttcgtaagcg tggagtaatc agatgggaaa
     1261 ttccaagtca gcagacaagt aagccgcaac aaccagtatt gttgttgcgg cgctctgtaa
     1321 ggctagtctc atctgattgc tgacgagcag acgtcgcccg gtattcctta atcgagggtt
     1381 gattcgtcat gaccaccaca cgccccgcgt gggcctaaac aaatatcaat cgcaaggaga
     1441 tcatattcat gaccaccaca cgccccgcgt gggcctatac gctgccggca gcactgctgc
     1501 tgatggctcc tttcgacatc ctcgcttcac tggcgatgga tatttatctc cctgtcgttc
     1561 cagcgatgcc cggcatcctg aacacgacgc ccgctatgat ccaactcacg ttgagcctct
     1621 atatggtgat gctcggcgtg ggccaggtga tttttggtcc gctctcagac agaatcgggc
     1681 gacggccaat tctacttgcg ggcgcaacgg ctttcgtcat tgcgtctctg ggagcagctt
     1741 ggtcttcaac tgcaccggcc tttgtcgctt tccgtctact tcaagcagtg ggcgcgtcgg
     1801 ccatgctggt ggcgacgttc gcgacggttc gcgacgttta tgccaaccgt cctgagggtg
     1861 tcgtcatcta cggccttttc agttcggtgc tggcgttcgt gcctgcgctc ggccctatcg
     1921 ccggagcatt gatcggcgag ttcttgggat ggcaggcgat attcattact ttggctatac
     1981 tggcgatgct cgcactccta aatgcgggtt tcaggtggca cgaaacccgc cctctggatc
     2041 aagtcaagac gcgccgatct gtcttgccga tcttcgcgag tccggctttt tgggtttaca
     2101 ctgtcggctt tagcgccggt atgggcacct tcttcgtctt cttctcgacg gctccccgtg
     2161 tgctcatagg ccaagcggaa tattccgaga tcggattcag ctttgccttc gccactgtcg
     2221 cgcttgtaat gatcgtgaca acccgtttcg cgaagtcctt tgtcgccaga tggggcatcg
     2281 caggatgcgt ggcgcgtggg atggcgttgc ttgtttgcgg agcggtcctg ttggggatcg
     2341 gcgaacttta cggctcgccg tcattcctca ccttcatcct accgatgtgg gttgtcgcgg
     2401 tcggtattgt cttcacggtg tccgttaccg cgaacggcgc tttggcagag ttcgacgaca
     2461 tcgcgggatc agcggtcgcg ttctacttct gcgttcaaag cctgatagtc agcattgtcg
     2521 ggacattggc ggtggcactt ttaaacagtg acacagcgtg gcccgtgatc tgttacgcca
     2581 cggcgatggc ggtactggtt tcgttggggc tggtgctcct tcggctccgt ggggctgcca
     2641 ccgagaagtc gccagtcgtc taaccgacga ctggtagcag gcccgctccg atgcggcgca
     2701 ctaaccatcg aaacctcgtg aatgtcggta tcctgtctgg caggataccg ctcatttccc
     2761 ttgttcagtt catcgccgtc gccgagcatc tgaattttcg gcatgcggcc aaggcacttg
     2821 gtatcagcca gtcgagcgtc agcgcgcgtg tgaaagcgct ggaggataac cttggtgtcc
     2881 tgctatttga gcgccatgcg cggggcgttc ggctaacaga cgcaggcagg cacttcatgg
     2941 agcgtgtcac ggcgggtgtc gatcaactcg atcacgcagt gaagaccgcg gagtgacggg
     3001 cactggctgg caatgtctag caacggcagg catttcggct gagggtaaaa gaactttccg
     3061 ctaagcgata gactgtatgt aaacacagta ttgcaaggac gcggaacatg cctcatgtgg
     3121 cggccaggac ggccagccgg gatcgggata ctggtcgtta ccagagccac cgacccgagc
     3181 aaacccttct ctatcagatc gttgacgagt attacccggc attcgctgcg cttatggcag
     3241 agcagggaaa ggaattgccg ggctatgtgc aacgggaatt tgaagaattt ctccaatgcg
     3301 ggcggctgga gcatggcttt ctacgggttc gctgcgagtc ttgccacgcc gagcacctgg
     3361 tcgctttcag ctgtaagcgt cgcggtttct gcccgagctg tggggcgcgg cggatggccg
     3421 aaagtgccgc cttgctggtt gatgaagtac tgcctgaaca acccatgcgt cagtgggtgt
     3481 tgagcttccc gtttcagctg cgtttcctgt ttgccagccg gcccgagatc atggggtggg
     3541 tgctgggcat cgtttaccgc gtcattgcca cgcacctggt caagaaagcg ggccataccc
     3601 accaagtggc caagacgggc gcggtcaccc tgatccagcg ttttggatcg gcgctcaatc
     3661 tgaatgttca cttccacatg ctgtttctcg acggtgtgta tgtcgagcaa tcccacggct
     3721 cagcgcgttt ccgctgggtc aaggcgccga ccagcccaga gctcacccag ctgacgcaca
     3781 ccatcgccca ccgggtgggt cgctatctgg aacggcaagg cctgctggaa cgggatgtcg
     3841 aaaacagcta tctggcctcg gatgcggtgg atgacgaccc gatgacaccc ctgctggggc
     3901 actcgatcac ttaccgtatc gctgtcggtt cacaggcggg gcgaaaggtg ttcactttgc
     3961 aaactctgcc gaccagtggt gatccgttcg gtgacgggat tggcaaggta gccgggtcca
     4021 gcctgcacgc cggcgtggcg gccagggccg atgaacgcaa gaagctcgaa cggctgtgcc
     4081 ggtacatcag ccgcccggcg gtatccgaga agcggctgtc gttaacacga ggcggcaacg
     4141 tgcgctacca gctcaagacg ccgtaccggg acggcaccac gcacgtcatt ttcgaaccat
     4201 tggatttcat tgcaaggctg gccgccctgg taccgaagcc cagagtcaac ctaacccgct
     4261 tccacggggt gttcgcaccc aacagtcggc accgggcgtt ggtcacgccg gcaaaacggg
     4321 gcaggggcaa caaggtcagg gtggctgatg aaccggcaac accagcacaa cggcgagcgt
     4381 cgat
//
LOCUS       DANLTI010000279         3292 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.186, whole genome shotgun sequence.
ACCESSION   DANLTI010000279 DANLTI010000000
VERSION     DANLTI010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.186"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            94..627
                     /gene="aadB"
                     /locus_tag="PXB09_002758"
     CDS             94..627
                     /gene="aadB"
                     /locus_tag="PXB09_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL5234798.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
     gene            685..1476
                     /locus_tag="PXB09_002759"
     CDS             685..1476
                     /locus_tag="PXB09_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL5234799.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            1553..2380
                     /locus_tag="PXB09_002760"
     CDS             1553..2380
                     /locus_tag="PXB09_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL5234800.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
     gene            2471..3175
                     /locus_tag="PXB09_002761"
     CDS             2471..3175
                     /locus_tag="PXB09_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDL5234801.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
BASE COUNT          803 a          805 c          921 g          763 t
ORIGIN      
        1 aataaatcaa ttattattat actgctgatc accgtattag cagcaacgat gttacgcagc
       61 agggcagtcg ccctaaaaca aaggttaggc cgcatggaca caacgcaggt cacattgata
      121 cacaaaattc tagctgcggc agatgagcga aatctgccgc tctggatcgg tgggggctgg
      181 gcgatcgatg cacggctagg gcgtgtaaca cgcaagcacg atgatattga tctgacgttt
      241 cccggcgaga ggcgcggcga gctcgaggca atagttgaaa tgctcggcgg gcgcgtcatg
      301 gaggagttgg actatggatt cttagcggag atcggggatg agttacttga ctgcgaacct
      361 gcttggtggg cagacgaagc gtatgaaatc gcggaggctc cgcagggctc gtgcccagag
      421 gcggctgagg gcgtcatcgc cgggcggcca gtccgttgta acagctggga ggcgatcatc
      481 tgggattact tttactatgc cgatgaagta ccaccagtgg actggcctac aaagcacata
      541 gagtcctaca ggctcgcatg cacctcactc ggggcggaaa aggttgaggt cttgcgtgcc
      601 gctttcaggt cgcgatatgc ggcctaacaa ttcgtccaag ccgacgccgc ttcgcggcgc
      661 ggcttaactc aggtgttaga catcatgagg gaagcggtga ccatcgaaat ttcgaaccaa
      721 ctatcagagg tgctaagcgt cattgagcgc catctggaat caacgttgct ggccgtgcat
      781 ttgtacggct ccgcagtgga tggcggcctg aagccataca gcgatattga tttgttggtt
      841 actgtggccg taaagcttga tgaaacgacg cggcgagcat tgctcaatga tcttatggag
      901 gcttcggctt tccctggcga gagcgagacg ctccgcgcta tagaagtcac ccttgtcgtg
      961 catgacgaca tcatcccgtg gcgttatccg gctaagcgcg agctgcaatt tggagaatgg
     1021 cagcgcaatg acattcttgc gggtatcttc gagccagcca tgatcgacat tgatctggct
     1081 atcttgctga caaaagcaag agaacatagc gttgccttgg taggtccagc ggcggaggaa
     1141 ctctttgatc cggttcctga acaggatcta tttgaggcgc taaatgaaac cttaacgcta
     1201 tggaactcgc cgcccgactg ggctggcgat gagcgaaatg tagtgcttac gttgtcccgc
     1261 atttggtaca gcgcaataac cggcaaaatc gcgccgaagg atgtcgctgc cgactgggca
     1321 ataaaacgcc tacctgccca gtatcagccc gtcttacttg aagctagaca ggcttatctt
     1381 ggacaagaag aagatcgctt ggcctcgcgc gcagatcagt tggaagaatt tgttcactac
     1441 gtgaaaggcg agatcaccaa ggtagtcggc aaataatgtc taacaattcg ttcaagccga
     1501 cgccgcttcg cggcgcggct taccttggcc gttgggcatt aaggaaaagt taatggcaat
     1561 ccgaatcttc gcgatacttt tctccatttt ttctcttgcc actttcgcgc atgcgcaaga
     1621 aggcacgcta gaacgttctg actggaggaa gtttttcagc gaatttcaag ccaaaggcac
     1681 gatagttgtg gcagacgaac gccaagcgga tcgtgccatg ttggtttttg atcctgtgcg
     1741 atcgaagaaa cgctactcgc ctgcatcgac attcaagata cctcatacac tttttgcact
     1801 tgatgcaggc gctgttcgtg atgagttcca gatttttcga tgggacggcg ttaacagggg
     1861 ctttgcaggc cacaatcaag accaagattt gcgatcagca atgcggaatt ctactgtttg
     1921 ggtgtatgag ctatttgcaa aggaaattgg tgatgacaaa gctcggcgct atttgaagaa
     1981 aatcgactat ggcaacgccg atccttcgac aagtaatggc gattactgga tagaaggcag
     2041 ccttgcaatc tcggcgcagg agcaaattgc atttctcagg aagctctatc gtaacgagct
     2101 gccctttcgg gtagaacatc agcgcttggt caaggatctc atgattgtgg aagccggtcg
     2161 caactggata ctgcgtgcaa agacgggctg ggaaggccgt atgggttggt gggtaggatg
     2221 ggttgagtgg ccgactggct ccgtattctt cgcactgaat attgatacgc caaacagaat
     2281 ggatgatctt ttcaagaggg aggcaatcgt gcgggcaatc cttcgctcta ttgaagcgtt
     2341 accgcccaac ccggcagtca actcggacgc tgcgcgataa aaccgcgcag cgccggttac
     2401 ttcaacgggc actgttgcaa atagtcggtg gtgataaact tatcatcccc ttttgctgat
     2461 ggagctgcac atgaacccat tcaaaggccg gcattttcag cgtgacatca ttctgtgggc
     2521 cgtacgctgg tactgcaaat acggcatcag ttaccgtgag ctgcaggaga tgctggctga
     2581 acgcggagtg aatgtcgatc actccacgat ttaccgctgg gttcagcgtt atgcgcctga
     2641 aatggaaaaa cggctgcgct ggtactggcg taacccttcc gatctttgcc cgtggcacat
     2701 ggatgaaacc tacgtgaagg tcaatggccg ctgggcgtat ctgtaccggg ccgtcgacag
     2761 ccggggccgc actgtcgatt tttatctctc ctcccgtcgt aacagcaaag ctgcataccg
     2821 gtttctgggt aaaatcctca acaacgtgaa gaagtggcag atcccacgat tcatcaacac
     2881 ggataaagcg cccgcctatg gtcgcgcgct tgctctgctc aaacgcgaag gccggtgccc
     2941 gtctgacgtt gaacaccgac agattaagta ccggaacaac gtgattgaat gcgatcatgg
     3001 caaactgaaa cggataatca acgccacgct gggatttaaa tccatgaaga cggcttacgc
     3061 caccatcaaa ggtattgagg tgatgcgtgc actacgcaaa ggccaggcct cagcatttta
     3121 ttatggtgat cccctgggcg aaatgcgcct ggtaagcaga gtttttgaaa tgtaaggcct
     3181 ttgaataaga caaaaggctg cctcatcgct aactttgcaa cagtgccgtt aaagctcggt
     3241 caatcggcac tgattgagcc tgactcacca ctgcaattag gatctttgat gc
//
LOCUS       DANLTI010000280         3238 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.189, whole genome shotgun sequence.
ACCESSION   DANLTI010000280 DANLTI010000000
VERSION     DANLTI010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.189"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            951..1088
                     /locus_tag="PXB09_002762"
     CDS             951..1088
                     /locus_tag="PXB09_002762"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5234802.1"
                     /translation="MKPLRIGARVIYPLQDLDKQIAYLEANLLENIKVHFIVESIEIK
                     G"
     gene            1223..2140
                     /locus_tag="PXB09_002763"
     CDS             1223..2140
                     /locus_tag="PXB09_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cephalosporin-hydrolyzing class A beta-lactamase
                     ROB-1"
                     /protein_id="HDL5234803.1"
                     /translation="MLNKLKIGTLLLLTLTACSPNSVHSVTSNPQPASAPVQQSATQA
                     TFQQTLANLEQQYQARIGVYVWDTETGHSLSYRADERFAYASTFKALLAGAVLQSLPE
                     KDLNRTISYSQKDLVSYSPETQKYVGKGMTIAQLCEAAVRFSDNSATNLLLKELGGVE
                     QYQRILRQLGDNVTHTNRLEPDLNQAKPNDIRDTSTPKQMAMNLNAYLLGNTLTESQK
                     TILWNWLDNNATGNPLIRAATPTSWKVYDKSGAGKYGVRNDIAVVRIPNRKPIVMAIM
                     STQFTEEAKFNNKLVEDAAKQVFHTLQLN"
     gene            2151..3068
                     /locus_tag="PXB09_002764"
     CDS             2151..3068
                     /locus_tag="PXB09_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014937123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5234804.1"
                     /translation="MKKKLLWILILGLIIISCKQRKTEMKEKIIKTNGIELCTESFGN
                     KKNPAILLVAGATVSMLYWDTEFCQQLSEKGFFVIRYDNRDVGKSTNYEPGSTPYDIV
                     DLTNDAISILDGYKIDKAHFVGISLGGLISQIASIKFADRVNSLTLMSSGPWGDSDPT
                     IPEMDTSILDFHSKAGTVNWTNEDSVVNYLIQGAELMSGKKQFDKQRSEKLIRAEFNR
                     ANNYISMFNHAALQGGGEEYWNRLNEIKQPTLIIHGTDDKIWHYKNAGFLLEKIKGSN
                     LITLEGTGHELHVDDWKSIIDGIEKHIND"
BASE COUNT         1055 a          605 c          659 g          919 t
ORIGIN      
        1 attattaggg aagtggttat tgtgggcggt aggtttttag tgttggaaag ctgttggaaa
       61 gctcgtgggt aactcgcaga gttatccatc agcttttcaa tggcttttca atacgacccg
      121 caggggaaaa accgttaaac cgtccacatt aaccgctgac ccaaaaagaa cgctttttac
      181 taaaagattt ctattcggtt ctcaaatgtt gcgtgaatgg ggcaacaata aaacgttgtg
      241 gcgtttatca gggtgggaat tgcagactta aacaatcaat tccgctgtat ccttaaatct
      301 cgcttatcag gtgtgcttgt atttcttggg gctttcgcct ttctaaccgt agcacgaaac
      361 ggagacagag cttaattttc gtattaagaa cgttatcact tctacgcctg tttattcttc
      421 cgaagtccga gctgaagacc gtctaattta aggtttacgt ttcttgttta cgtcgttgaa
      481 tggttttttg gtagtaggga cgcttcgcaa tctcttgcat tactagctac cctttgctat
      541 gattagattg ttcacgtctg gatcatagca aagaacgtac tgatacagat tataggaaaa
      601 gggatcgaat gtcaaaagtt cgatcccttt ttcttttcta aagcattggt attaaaggct
      661 ttaaggtgta ttttattaaa atctgtacac ctttgtgaaa atccatacac ctttcttacc
      721 gtgtaatttt atgaaaattc gtgcaccttt ctgctaacgc cctgcggttg ttagactaaa
      781 aaagccattg aaagcaagtt tcaacggctt tttcagtccc gaataaaaca aaaccgcctt
      841 gttaggcggt tatgtgttaa aatcactttc gcactatggc ggcggctcgc actaccgttc
      901 atagtgtgag cctagtcgct tagccttata gtgctaaggg ggtgatttat gtgaaacctc
      961 tacgaattgg ggcaagggtt atttatccgc ttcaagactt agacaagcaa attgcatacc
     1021 tagaggcgaa cttacttgag aatatcaaag tgcatttcat tgtagaaagc attgagatta
     1081 aaggctaaat tgctagactt ttgcgcttaa attcgccaaa atctgttttt ttgttctaca
     1141 aacaaattat ccgaatttcc gcgcaatgta cgtttcaggc tgcctgaaaa gaaatttatt
     1201 tagtaaaatc aaaggataat ttatgttaaa taagttaaaa atcggcacat tattattgct
     1261 gacattaacg gcttgttcgc ccaattctgt tcattcggta acgtctaatc cgcagcctgc
     1321 tagtgcgcct gtgcaacaat cagccacaca agccaccttt caacagactt tggcgaattt
     1381 ggaacagcag tatcaagccc gaattggcgt ttatgtatgg gatacagaaa cgggacattc
     1441 tttgtcttat cgtgcagatg aacgctttgc ttatgcgtcc actttcaagg cgttgttggc
     1501 tggggcggtg ttgcaatcgc tgcctgaaaa agatttaaat cgtaccattt catatagcca
     1561 aaaagatttg gttagttatt ctcccgaaac ccaaaaatac gttggcaaag gcatgacgat
     1621 tgcccaatta tgtgaagcag ccgtgcggtt tagcgacaac agcgcgacca atttgctgct
     1681 caaagaattg ggtggcgtgg aacaatatca acgtattttg cgacaattag gcgataacgt
     1741 aacccatacc aatcggctag aacccgattt aaatcaagcc aaacccaacg atattcgtga
     1801 tacgagtaca cccaaacaaa tggcgatgaa tttaaatgcg tatttattgg gcaacacatt
     1861 aaccgaatcg caaaaaacga ttttgtggaa ttggttggac aataacgcaa caggcaatcc
     1921 attgattcgc gctgctacgc caacatcgtg gaaagtgtac gataaaagcg gggcgggtaa
     1981 atatggtgta cgcaatgata ttgcggtggt tcgcatacca aatcgcaaac cgattgtgat
     2041 ggcaatcatg agtacgcaat ttaccgaaga agccaaattc aacaataaat tagtagaaga
     2101 tgcagcaaag caagtatttc atactttaca gctcaactaa caaattcagc atgaaaaaaa
     2161 aactactttg gatattaatt ttaggactga taataatcag ttgcaaacaa aggaaaacag
     2221 aaatgaaaga gaaaataatt aaaacaaacg gcattgaact ctgtacggaa agttttggaa
     2281 ataagaaaaa tccagcaatc cttttggtag caggtgcaac cgtatcaatg ctgtattggg
     2341 acactgaatt ttgccaacaa ttatctgaaa aaggattttt tgttattcgt tacgacaaca
     2401 gagatgtagg aaaatccact aattatgaac caggttctac tccatacgat attgttgact
     2461 taactaatga cgctatttca atattggatg gctacaagat tgacaaagca cattttgtgg
     2521 ggatttcttt gggcggacta atttctcaaa tagcatcaat aaagtttgcc gacagagtta
     2581 actccttaac tcttatgtca tcaggccctt ggggagactc agacccaact atacctgaaa
     2641 tggacacgag tattttagat ttccatagta aagcaggtac agtcaattgg acaaatgaag
     2701 acagtgtggt aaactattta attcagggtg cagaattaat gagtggcaag aaacaatttg
     2761 acaaacaaag aagtgaaaaa ctgataagag ctgagttcaa tagagccaac aattatataa
     2821 gtatgttcaa tcacgctgca ttgcaaggtg gtggtgaaga atattggaac agattaaacg
     2881 aaatcaaaca acccacctta attatccacg gaacagacga caaaatttgg cattataaga
     2941 atgcaggttt tttactagaa aaaataaaag gttcaaatct aatcaccctt gaaggtacag
     3001 gacacgaatt acacgttgat gattggaaat caataattga tggaatagaa aaacacataa
     3061 atgactgata aacaaaaaca acgacccgct aacaatgtat ataaaaaata ggcgaaacag
     3121 tagtaaattc aaggcttttg gctcgtatta tactttgtgc ttaaccgaaa atttggcact
     3181 tcgaaatcgc ctacttttcg ctgaatttac aatccaagtg caacaaaaaa agaagtac
//
LOCUS       DANLTI010000281         3096 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.193, whole genome shotgun sequence.
ACCESSION   DANLTI010000281 DANLTI010000000
VERSION     DANLTI010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3096
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.193"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..322
                     /locus_tag="PXB09_002765"
     CDS             <1..322
                     /locus_tag="PXB09_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5234805.1"
                     /translation="REIAREKAQSSNKWLARVGAVFQGERWATQASIGFGKRYFADKH
                     YLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNIADFYSRQNKEVFFTL
                     EKLF"
     gene            468..941
                     /gene="gpt"
                     /locus_tag="PXB09_002766"
     CDS             468..941
                     /gene="gpt"
                     /locus_tag="PXB09_002766"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5234806.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            1054..1677
                     /gene="gmk"
                     /locus_tag="PXB09_002767"
     CDS             1054..1677
                     /gene="gmk"
                     /locus_tag="PXB09_002767"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5234807.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            1767..>3096
                     /locus_tag="PXB09_002768"
     CDS             1767..>3096
                     /locus_tag="PXB09_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5234808.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILN"
BASE COUNT          923 a          585 c          703 g          885 t
ORIGIN      
        1 gcgtgaaatt gcacgggaaa aagcacaaag ctcgaataag tggctggctc gagtgggggc
       61 ggtttttcaa ggcgaacgct gggcaacgca ggcaagtatc ggctttggca agcgatattt
      121 tgccgacaag cactatttgt ttggctataa gcggttagac acggaatatc aagccaattt
      181 agcggtttgg aaccgcactt ggcattggca gggcattgtg ccgaagctga atttccgtta
      241 tcaaaaaatt gacagcaata ttgctgattt ttactctcgc caaaacaagg aagtcttttt
      301 cactttagaa aagctatttt agtgttggtt ttttgtgcta agcatacgat tgcgtagctg
      361 ccggcacaaa aaaataaatg aaatgatggc gaaaaaagca ttttcgggtt atcctagtgc
      421 aattttttat atcggggtag cccccaattt tatattaggt tgtttctatg agtgaaaaat
      481 acacaaatga aaaatatgtc gtgacgtggg atatgttcca tatgcacgct cgcaagttgg
      541 cagaaaattt attacctgcc acacagtgga aagggattat tgcggtgagc cgtggcggct
      601 tgtttccggc agccgtttta gcacgtgagt tgggtattcg ccacgtagaa acagtgtgca
      661 ttgccagcta cgatcacgat agccaaggtg agttaaatgt gttacacgca gccgataccg
      721 atggcgaagg ctttattgtg gtagatgatt tagtggatac cggcaacacg gcaaaagaaa
      781 ttcgcagaat gtacccgaaa gctcgttttg taaccgtgtt tgcgaaaccg cacggtgcac
      841 cgttggttga tgattatgtg attgatattc cacaagaaac gtggattgag cagccttggg
      901 atttaggcat taccttcgtt cagcctttgg cacgtagata attttgtgta atggacaatg
      961 aaagttgtcc attatttttt atttattcct atgaaatgta ggggcgaatc atcattcgcc
     1021 ctattcccaa aatcaaatag gtatatacaa ataatgagtt taggcaatct ttatattatt
     1081 tctgccccaa gtggagcagg aaaatcttcc ttaattaacg ccttgttggc ggatttaccc
     1141 cgttcggaag tacagctttc gatttcacac actacccgtc agcctcgtcc ggcagaacag
     1201 gacggcgtgc attattattt cacttcgcac gatgagttta agcagctgat tgagcaaggg
     1261 tattttttag aatgggcgga ggtgtttggc aattattacg gcacatcatt gccgatgatt
     1321 gaacgtagcc tagagcaggg cattgatgtc tttttggata ttgactggca aggggctaga
     1381 caaattcggg aaaaagtgcc gaatgtgaaa accgttttta ttttgccacc gtcaaaaaca
     1441 gaattggaaa aacgtttaat cgggcgtggg caagattccg ctgaaaccat tgccaaacgt
     1501 atggcagagg cggtgtcgga aatgaaccat tacaatgagt tcgattatgt gattattaat
     1561 gatgatttcc aacaggcatt ggcagagcta aaagcgattt taattgccga gcgtttgagc
     1621 ttaggttcgc aacaaattcg tcatcagcat ttgattactg atttgttaaa taattaaatg
     1681 aacagttgtt catttaactg gaaaggcaat ctgtttttgg gtagaatacg cccattttcc
     1741 cctctttatt ttcaaaagga aatgtaatga aactttcaaa attagcattt tctgtggcgt
     1801 tggctctaac cgtaacggct tgtaccacag ggaatatgag caatgacggg actttgcaac
     1861 aagcacagca aacctatcaa agctatgatg aaattaccaa acaatatcaa attaacgagc
     1921 aatggtggca aggctatacg gatgcggaat taaaccgtgt ggttgattta gccatcaaaa
     1981 ataaccttga tttagccaaa agcggaattg cagtcaataa agccttgtat aacgctaatt
     2041 tagtaggggc aaatttagtg ccaaccttta gtggttcagg ttctgtttct gcggctaaag
     2101 gtttaggttc ggcttcttca aataatgttt cgaccggtgt ttcaacaacc gcagctcaag
     2161 ctgcatttaa tttaagttat actgtggatt tatggcgacg tttagccgat accgccagtg
     2221 cggcagaatg gacgcataaa gccaccattg aagacttaaa agctacccgt ttatctatta
     2281 ttaatgcggt tgtgactact tactaccagt tagcttacta tcgtgatgcg attcgtatta
     2341 ccgaagagag cattcgccat tatgagcaaa tcagccgtat tttaactaac aaaatgaatg
     2401 ccggtgcgat tgatagttta gcggttgatc aggctcaaca agcggtctta aacgccagaa
     2461 atagtgtaat tgatctgaaa accaaccaaa aaattgccga gcaaacatta cgcaatttgt
     2521 taaatgttca gccaaatact ccgcttaaca ttcgttaccc gaatattatg agcgtgaaat
     2581 tgcaaggggt agatttaaat gtgccagtgt cagccattgc taatcgccct gatgtagtag
     2641 gctcgttaca acgcttacaa agtgcattta aaaccttaac cgcaaccgag aaaagctggt
     2701 tcccaacctt aaccatcggt ggttctatta ccggtagtgc aaccaatatc ggcaatgtgg
     2761 cagataaccc tgtgggtaac ggcttaatta aattggattt accgttctta gattggaatc
     2821 gggttaaaaa taacgtaaaa atttctgaaa cggattatgt gactgcccgt ttaaactatg
     2881 agcaaaaaat tacctcagcc ttaaatgaaa ttgaccgtta ttattacagt tatacgcagt
     2941 cgagaagctc gttaaaaatc cttcaagata ccaatgcgaa aaataaacgt atcagttcat
     3001 actataaaaa ccgttatgaa caaggggtgt cggagttccg tgagtggatt accgcactga
     3061 ataccgagct taattctcag ttggcgattt taaatg
//
LOCUS       DANLTI010000282         1644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.223, whole genome shotgun sequence.
ACCESSION   DANLTI010000282 DANLTI010000000
VERSION     DANLTI010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.223"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            <1..549
                     /locus_tag="PXB09_002769"
     CDS             <1..549
                     /locus_tag="PXB09_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDL5234809.1"
                     /translation="LLDSENPPLDTFLIMQYEPFLKYAGAPSYKESYKSLLYKPFFKT
                     NILHSFSKFDFKPAPNANIILGQFSYKDFTDINLEDRHAWKDFLAFVFLEKGVTFKEK
                     TKRIFSYKQQKIILKESRINDDSNISNWSYEFWLKMFKLYNSNMVSKDKKVLVNNSYK
                     RMLEHESSLEKIHRNRKQNNRK"
     gene            complement(664..1635)
                     /locus_tag="PXB09_002770"
     CDS             complement(664..1635)
                     /locus_tag="PXB09_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002337518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element ISApl1 family transposase"
                     /protein_id="HDL5234810.1"
                     /translation="MSTSYRHLTINEREKIMILLAQGKKQAEIAKALGRSSSTISREL
                     KRHALESYSATNAQNSYLKHRQNSKAQRKLEQPEYFNLVQEKFLTENWSPEQISARLK
                     LEKSELSISYSTIYRGIYSGLFDIGERKASRKLRHKGKTRHTKNHHEKRGKIQISNHL
                     NDRPISAQNRSRFGHWKADTVLGKAGGACLLTLTERKSRFELVKKIPAKKAEAVQKAM
                     IELLDSHILRSITPDRGKEFAQHRLVTEALGVEFYFPEPHQPWTRGTNENTNGLLREY
                     FPKHQDINQWSEVDIQQVVNKLNLRPRKCLGWKTPYEVYFKKTLHLV"
BASE COUNT          498 a          291 c          310 g          545 t
ORIGIN      
        1 ttgttagata gtgagaaccc acccttagat acttttttaa ttatgcaata tgaacctttt
       61 ttaaagtatg cgggtgcacc atcttacaag gagtcttata aatctttatt atataaacca
      121 tttttcaaaa ctaacatatt gcatagcttt agcaaatttg attttaagcc agctccaaac
      181 gcaaacatta ttttgggcca attttcttat aaagacttta cagatataaa ccttgaagac
      241 aggcatgctt ggaaagattt tttagccttt gtctttttag aaaagggagt tacatttaaa
      301 gaaaaaacaa aacgaatttt tagttataag caacaaaaaa taattttaaa agaaagccga
      361 attaatgatg attcaaatat aagtaattgg agttatgaat tttggctaaa aatgtttaaa
      421 ctctataatt cgaacatggt aagcaaggat aaaaaagttt tagttaacaa ttcgtataaa
      481 agaatgttag aacatgagtc tagtttagaa aagattcata gaaatagaaa gcaaaataac
      541 agaaaataga taaacggcag ataaggaaaa gctaaatgtt aaaattaaag ctagaaaaca
      601 taaacaaaac tttcgatggg aaaaactttg ttgttaaaaa ttttaatttg gaagcttgaa
      661 ttgtcaaacc aagtgcaacg tttttttgaa gtaaacttca taaggtgttt tccaacccaa
      721 acatttacgc ggtcgtaaat tcagtttatt gaccacctgt tgaatatcaa cttcgctcca
      781 ctgattgatg tcttggtgct tcggaaagta ttcacgaagt aacccatttg tattttcatt
      841 cgttccccgt gtccacggtt gatgcggctc ggggaagtaa aattctacac ccagtgcttc
      901 tgttaccaaa cgatgttggg caaattcttt accacggtct ggcgtaattg accgcaatat
      961 atgtgaatcc agcaattcaa tcatggcttt ttggactgct tcggcttttt tggcaggaat
     1021 tttcttcacc aactcaaaac gacttttgcg ttccgtcagc gtcagcaaac aagctccacc
     1081 cgctttaccc agtacggtat cggctttcca atgtccaaag cgactgcgat tttgcgccga
     1141 aatgggacgg tcgttcaaat ggttggatat ctgaattttg ccacgttttt catgatgatt
     1201 ttttgtatgc cgtgttttgc ctttgtggcg cagtttgcga ctggctttgc gttcgcctat
     1261 atcaaacaac cctgaataaa taccacgata aatggttgaa taactaatgg ataattcaga
     1321 tttttccaat tttaatcgtg cgctgatttg ttcgggcgac cagttttctg tcagaaactt
     1381 ttcttgcacc aaattgaaat attcaggctg ctctaatttg cgctgtgctt tgctattttg
     1441 acgatgcttc aaatagctgt tttgtgcgtt cgttgcactg tagctttcta gagcgtgtcg
     1501 tttcagctcg cgagaaatgg tgctggagct acgtcccagt gctttggcaa tttctgcttg
     1561 ttttttgccc tgtgcgagta aaatcattat cttttctcgc tcgtttattg taagatgtcg
     1621 gtaggaagta ctcatcattt ggaa
//
LOCUS       DANLTI010000283         1354 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25995822-rid16719993.guided.231, whole genome shotgun sequence.
ACCESSION   DANLTI010000283 DANLTI010000000
VERSION     DANLTI010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25995822
            Sequence Read Archive: SRR18050826
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574683.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574683.1
            Genome Coverage       :: 72x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 21:13:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,642
            CDSs (with protein)               :: 2,642
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 39 of 81
            Pseudo Genes (incomplete)         :: 32 of 81
            Pseudo Genes (internal stop)      :: 11 of 81
            Pseudo Genes (multiple problems)  :: 1 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25995822-rid16719993.guided.231"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: TN"
                     /collection_date="2020-09-23"
                     /collected_by="Kord Animal Health Diagnostic Laboratory,
                     Nashville, TN"
     gene            47..1249
                     /gene="tet(H)"
                     /locus_tag="PXB09_002771"
     CDS             47..1249
                     /gene="tet(H)"
                     /locus_tag="PXB09_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL5234811.1"
                     /translation="MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYG
                     VLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI
                     IAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP
                     FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATY
                     FIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEK
                     TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGK
                     LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT
                     PKAVISTP"
BASE COUNT          358 a          275 c          275 g          446 t
ORIGIN      
        1 agatatatta cacccactct atcactgata gatttttagg atctcaatga ataaatcaat
       61 tattattata ctgctgatca ccgtattaga tgccattggt atcgggctta tcatgccagt
      121 actccctact ctattaaatg aatttgtcag tgaaaattca ctggcaaccc attacggtgt
      181 gctattagcg ctctatgcta ccatgcaggt tatttttgct cctattctag gacgactgtc
      241 tgataaatac ggcagaaaac ccatcttgct gttttccctt ttaggcgcgg cactcgacta
      301 tcttttaatg gcattctcaa ccacactttg gatgctctat attgggcgca tcattgcggg
      361 gatcacaggc gcaacaggtg ccgtatgtgc atcagcgatg agtgatgtga ctcccgctaa
      421 aaatcgaact cgctattttg gtttcttagg tggtgctttt ggtgttggcc ttattatcgg
      481 cccaatgcta gggggattat taggtgatat cagtgctcat atgccattta tttttgccgc
      541 tatttcacac tcgatattat taatactctc tttgctcttt ttccgagaaa cacaaaaaag
      601 agaagcgctt gttgccaata ggacacctga aaaccaaact gcctcaaata cagtcactgt
      661 tttttttaag aaaagcctct acttttggtt agcaacctat tttattatcc agcttatcgg
      721 gcaaattcct gccaccatct gggtgctgtt tacacaatat cgttttgatt ggaacacaac
      781 ttctatcggt atgtctttgg cggttctggg tgtattaaat attttctttc aggcgattgt
      841 cgctgggaaa ttggcacaaa aatggggcga aaaaaccacc attatgatca gtatgtctat
      901 tgatatgatg ggctgtttat tattagcgtg gataggccac gtttgggtca tcttaccagc
      961 attaatttgc ttagcggcag gaggtatggg gcaacccgca ttacaaggtt atttatcaaa
     1021 atctgtcgat gataatgcgc aagggaaatt acaaggtact ctggtgagcc taaccaatat
     1081 taccgggatc attggtcccc ttttatttgc ctttatttat agttatagcg tcgcttattg
     1141 ggatggtctg ttatggctga tgggggcaat actttatgct atgttgctta ttaccgctta
     1201 ttttcaccaa agaaaaacca cacctaaagc tgttatttca accccttaat actagaaatt
     1261 ataaagatca taaaagtcct gtccgctctt aataacgttg ataggacttt atttgggtat
     1321 ccggattaca gggttgaaac agggctataa acgc
//
